Laurasiatheria_c	ANCESTRAL SPECIES	24	ENSGT00390000014290	ENSGT00390000014786	ENSGT00530000063668.A	ENSGT00940000157209.jb	ENSGT00950000183074.A #7	ENSGT00390000016232 #8	ENSGT00390000009615 #9	ENSGT01030000234517.A #13	ENSGT00390000008413	ENSGT00940000158528.y.b #14	ENSGT00390000008041.B #15	ENSGT00940000157762 #16	ENSGT00510000047245 #17	ENSGT00950000182902.a.c #18	ENSGT00940000156781 #20	ENSGT00940000160814 #22	ENSGT00530000063835.b #23	ENSGT00400000022086.a #24	ENSGT00510000048348 #25	ENSGT00940000157008 #26	ENSGT00390000009127 #27	ENSGT00940000156182 #28	ENSGT00940000153902.a #29	ENSGT00940000155638	ENSGT00950000182917.b	ENSGT00390000000444	ENSGT00940000155295	ENSGT00390000017571	ENSGT00940000162118	ENSGT00940000159287	ENSGT00940000156352
Equus	ANCESTRAL SPECIES	36	ENSGT00390000014786	ENSGT00530000063668.A	ENSGT00940000157209.jb	ENSGT00950000183074.A #7	ENSGT00390000016232 #8	ENSGT00390000009615 #9	ENSGT01030000234517.A #13	ENSGT00940000158528.y.b #14	ENSGT00390000008041.B #15	ENSGT00940000157762 #16	ENSGT00510000047245 #17	ENSGT00950000182902.a.c #18	ENSGT01100000263995.a.b #19	ENSGT00940000156781 #20	ENSGT00940000153341.b.p.a.a.`b.a #21	ENSGT00940000160814 #22	ENSGT00530000063835.b #23	ENSGT00400000022086.a #24	ENSGT00510000048348 #25	ENSGT00940000157008 #26	ENSGT00390000009127 #27	ENSGT00940000156182 #28	ENSGT00940000153902.a #29
Horse	MODERN SPECIES	29	COLEC12 (ENSECAG00000018963) #7	THOC1 (ENSECAG00000009267) #8	USP14 (ENSECAG00000022985) #9	ENSECAG00000057356 #10	ENSECAG00000047314 #11	ENSECAG00000059989 #12	ROCK1 (ENSECAG00000021002) #13	ENSECAG00000006661 #14	GREB1L (ENSECAG00000019278) #15	ESCO1 (ENSECAG00000016120) #16	SNRPD1 (ENSECAG00000052510) #17	ABHD3 (ENSECAG00000010188) #18	ENSECAG00000046672 #19	MIB1 (ENSECAG00000023659) #20	ENSECAG00000023284 #21	GATA6 (ENSECAG00000023279) #22	RBBP8 (ENSECAG00000018454) #23	CABLES1 (ENSECAG00000015927) #24	TMEM241 (ENSECAG00000014999) #25	RIOK3 (ENSECAG00000009028) #26	RMC1 (ENSECAG00000025134) #27	NPC1 (ENSECAG00000021651) #28	ANKRD29 (ENSECAG00000020979) #29	ENSECAG00000049796 #30	ENSECAG00000037873 #31	CHMP1B (ENSECAG00000044635) #32	GNAL (ENSECAG00000005343) #33	MPPE1 (ENSECAG00000023035) #34	IMPA2 (ENSECAG00000017598) #35	CIDEA (ENSECAG00000026894) #36	TUBB6 (ENSECAG00000016535) #37
Donkey	MODERN SPECIES	27	CLUL1 (ENSEASG00005002706)	CETN1 (ENSEASG00005037157)	COLEC12 (ENSEASG00005002701) #7	THOC1 (ENSEASG00005002549) #8	ENSEASG00005002507 #9	ENSEASG00005002481 #13	ENSEASG00005002473 #14	GREB1L (ENSEASG00005002449) #15	ESCO1 (ENSEASG00005002439) #16	ENSEASG00005028649	ENSEASG00005023455	ABHD3 (ENSEASG00005002421) #18	ENSEASG00005038058 #19	MIB1 (ENSEASG00005002407) #20	ENSEASG00005022750 #21	GATA6 (ENSEASG00005033201) #22	RBBP8 (ENSEASG00005002384) #23	CABLES1 (ENSEASG00005002344) #24	RIOK3 (ENSEASG00005002317) #26	TMEM241 (ENSEASG00005033918) #25	RMC1 (ENSEASG00005002313) #27	NPC1 (ENSEASG00005002305) #28	ENSEASG00005002302 #29	ENSEASG00005002235 #30	ENSEASG00005002293 #31	ENSEASG00005002286 #33	MPPE1 (ENSEASG00005002282) #34	ENSEASG00005027351	IMPA2 (ENSEASG00005002278) #35	CIDEA (ENSEASG00005002269) #36	TUBB6 (ENSEASG00005033959) #37
Chiroptera	ANCESTRAL SPECIES	26	ENSGT00390000014290	ENSGT00390000014786	ENSGT00530000063668.A	ENSGT00940000157209.jb	ENSGT00950000183074.A #7	ENSGT00390000016232 #8	ENSGT00390000009615 #9	ENSGT01030000234517.A #13	ENSGT00390000008413	ENSGT00940000158528.y.b #14	ENSGT00390000008041.B #15	ENSGT00940000157762 #16	ENSGT00510000047245 #17	ENSGT00950000182902.a.c #18	ENSGT00940000156781 #20	ENSGT00940000160814 #22	ENSGT00530000063835.b #23	ENSGT00400000022086.a #24	ENSGT00510000048348 #25	ENSGT00940000157008 #26	ENSGT00390000009127 #27	ENSGT00940000156182 #28	ENSGT00940000153902.a #29	ENSGT00940000155638	ENSGT00950000182917.b	ENSGT00390000000444.b	ENSGT00940000155295	ENSGT00390000017571	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354
Megabat	MODERN SPECIES	4325																GATA6 (ENSPVAG00000004151) #22
Microchiroptera	ANCESTRAL SPECIES	26	ENSGT00390000014290	ENSGT00390000014786	ENSGT00530000063668.A	ENSGT00940000157209.jb	ENSGT00950000183074.A #7	ENSGT00390000016232 #8	ENSGT00390000009615 #9	ENSGT01030000234517.A #13	ENSGT00390000008413	ENSGT00940000158528.y.b #14	ENSGT00390000008041.B #15	ENSGT00940000157762 #16	ENSGT00510000047245 #17	ENSGT00950000182902.a.c #18	ENSGT00940000156781 #20	ENSGT00940000160814 #22	ENSGT00530000063835.b #23	ENSGT00400000022086.a #24	ENSGT00510000048348 #25	ENSGT00940000157008 #26	ENSGT00390000009127 #27	ENSGT00940000156182 #28	ENSGT00940000153902.a #29	ENSGT00940000155638	ENSGT00390000000444.b	ENSGT00940000155295	ENSGT00390000017571	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00390000011620.a.a.a
Microbat	MODERN SPECIES	1137							ENSMLUG00000004090 #8	USP14 (ENSMLUG00000004069) #9	ROCK1 (ENSMLUG00000014044) #13	ENSMLUG00000025553 #14	GREB1L (ENSMLUG00000009091) #15	ESCO1 (ENSMLUG00000009110) #16	SNRPD1 (ENSMLUG00000009124) #17	ABHD3 (ENSMLUG00000009135) #18	MIB1 (ENSMLUG00000004022) #20	ENSMLUG00000013566 #22	RBBP8 (ENSMLUG00000014469) #23	PARD6G (ENSMLUG00000000673)	ADNP2 (ENSMLUG00000006751)	RBFA (ENSMLUG00000006729)	ENSMLUG00000026918	TXNL4A (ENSMLUG00000009188)	SLC66A2 (ENSMLUG00000016199)	KCNG2 (ENSMLUG00000016184)	CTDP1 (ENSMLUG00000011676)	NFATC1 (ENSMLUG00000001296)	ATP9B (ENSMLUG00000010589)	SALL3 (ENSMLUG00000010582)
Greater horseshoe bat	MODERN SPECIES	10	TYMS (ENSRFEG00010017484)	CLUL1 (ENSRFEG00010017641)	CETN1 (ENSRFEG00010017876)	COLEC12 (ENSRFEG00010017902) #7	THOC1 (ENSRFEG00010018020) #8	USP14 (ENSRFEG00010018267) #9	ROCK1 (ENSRFEG00010018350) #13	ENSRFEG00010018390	ENSRFEG00010018417 #14	GREB1L (ENSRFEG00010018468) #15	ESCO1 (ENSRFEG00010019062) #16	SNRPD1 (ENSRFEG00010019168) #17	ABHD3 (ENSRFEG00010019220) #18	MIB1 (ENSRFEG00010019282) #20	ENSRFEG00010019353	GATA6 (ENSRFEG00010019389) #22	RBBP8 (ENSRFEG00010019440) #23	CABLES1 (ENSRFEG00010019516) #24	TMEM241 (ENSRFEG00010019573) #25	RIOK3 (ENSRFEG00010019628) #26	RMC1 (ENSRFEG00010019707) #27	NPC1 (ENSRFEG00010019799) #28	ANKRD29 (ENSRFEG00010019862) #29	LAMA3 (ENSRFEG00010020190)	ENSRFEG00010021435	OSBPL1A (ENSRFEG00010021452)	IMPACT (ENSRFEG00010021480)	ZNF521 (ENSRFEG00010021509)	SS18 (ENSRFEG00010021529)	PSMA8 (ENSRFEG00010021557)	TAF4B (ENSRFEG00010021574)