Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000155036.l	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b ##34	ENSGT00730000111073 #35	ENSGT00390000013802.v.b	ENSGT00530000063866.f.b
Glires	ANCESTRAL SPECIES	1	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000155036.l	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b ##34	ENSGT00730000111073 #35	ENSGT00530000063866.f.b	ENSGT00390000013802.v.b
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b.p ##34	ENSGT00730000111073 #35	ENSGT00530000063866.f.b	ENSGT00390000013802.v.b
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Lesser Egyptian jerboa	MODERN SPECIES	145	Tmem132a (ENSJJAG00000019362) #7	Slc15a3 (ENSJJAG00000018033) #8	Cd6 (ENSJJAG00000017281) #9	Cd5 (ENSJJAG00000014422) #10	Vps37c (ENSJJAG00000013830) #11	Pga5 (ENSJJAG00000013252) #12	Vwce (ENSJJAG00000012536) #13	Ddb1 (ENSJJAG00000017769) #14	Tkfc (ENSJJAG00000012794) #15	Cyb561a3 (ENSJJAG00000011193) #16	Tmem138 (ENSJJAG00000007221) #17	Tmem216 (ENSJJAG00000020647) #18	Cpsf7 (ENSJJAG00000019390) #19	Sdhaf2 (ENSJJAG00000018790) #20	Ppp1r32 (ENSJJAG00000017237) #21	Lrrc10b (ENSJJAG00000013551) #22	Syt7 (ENSJJAG00000013923) #23	Dagla (ENSJJAG00000002892) #24	Myrf (ENSJJAG00000010756) #25	Tmem258 (ENSJJAG00000022691) #26	Fen1 (ENSJJAG00000012958) #27	ENSJJAG00000002498 #28	Fads1 (ENSJJAG00000022490) #29	Fads2 (ENSJJAG00000021145) #30	Fads3 (ENSJJAG00000020671) #31	Rab3il1 (ENSJJAG00000013036) #32	ENSJJAG00000011109 #33	Fth1 (ENSJJAG00000010241) #34	Incenp (ENSJJAG00000003541) #35
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.u	ENSGT00530000063866.f.a
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.u	ENSGT00950000183045.A.a.a
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a.d #34	ENSGT00730000111073 #35	ENSGT00390000013802.u	ENSGT00950000183045.A.a.a
Chinese hamster chok1gshd	MODERN SPECIES	401	Slc15a3 (ENSCGRG00001023689) #8	ENSCGRG00001010151	Cd6 (ENSCGRG00001015074) #9	Cd5 (ENSCGRG00001021859) #10	Vps37c (ENSCGRG00001022544) #11	Pga5 (ENSCGRG00001021989) #12	Vwce (ENSCGRG00001017748) #13	Ddb1 (ENSCGRG00001016599) #14	Tkfc (ENSCGRG00001018294) #15	Cyb561a3 (ENSCGRG00001011459) #16	Tmem138 (ENSCGRG00001009418) #17	Tmem216 (ENSCGRG00001006200) #18	Cpsf7 (ENSCGRG00001020382) #19	Sdhaf2 (ENSCGRG00001018789) #20	Ppp1r32 (ENSCGRG00001010292) #21	Lrrc10b (ENSCGRG00001011211) #22	Syt7 (ENSCGRG00001022753) #23	Dagla (ENSCGRG00001004102) #24	Myrf (ENSCGRG00001021116) #25	ENSCGRG00001013240 #26	Fen1 (ENSCGRG00001009889) #27	Fads1 (ENSCGRG00001018831) #29	Fads2 (ENSCGRG00001013858) #30	Fads3 (ENSCGRG00001017095) #31	Rab3il1 (ENSCGRG00001015063) #32	ENSCGRG00001014139 #33	FTH1 (ENSCGRG00001020220) #34	Incenp (ENSCGRG00001019028) #35	Scgb2a2 (ENSCGRG00001015765)	Asrgl1 (ENSCGRG00001019390)	Scgb1a1 (ENSCGRG00001017835)
Golden Hamster	MODERN SPECIES	617	Tmem132a (ENSMAUG00000011465) #7	Slc15a3 (ENSMAUG00000012683) #8	Cd6 (ENSMAUG00000012522) #9	Cd5 (ENSMAUG00000011872) #10	Vps37c (ENSMAUG00000011856) #11	Pga5 (ENSMAUG00000012386) #12	Vwce (ENSMAUG00000013253) #13	Ddb1 (ENSMAUG00000012926) #14	Tkfc (ENSMAUG00000011622) #15	Cyb561a3 (ENSMAUG00000011671) #16	Tmem138 (ENSMAUG00000011913) #17	Tmem216 (ENSMAUG00000012971) #18	Cpsf7 (ENSMAUG00000013020) #19	Sdhaf2 (ENSMAUG00000011818) #20	Ppp1r32 (ENSMAUG00000011958) #21	Lrrc10b (ENSMAUG00000002510) #22	Syt7 (ENSMAUG00000012225) #23	Dagla (ENSMAUG00000013406) #24	Myrf (ENSMAUG00000013986) #25	Tmem258 (ENSMAUG00000011933) #26	Fen1 (ENSMAUG00000012401) #27	ENSMAUG00000012365 #28	Fads1 (ENSMAUG00000013100) #29	Fads2 (ENSMAUG00000012801) #30	Fads3 (ENSMAUG00000012190) #31	Rab3il1 (ENSMAUG00000012007) #32	ENSMAUG00000013033 #33	Fth1 (ENSMAUG00000013659) #34	Incenp (ENSMAUG00000013427) #35	Asrgl1 (ENSMAUG00000012422)	ENSMAUG00000012867
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00520000061410 #28	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Northern American deer mouse	MODERN SPECIES		Tmem132a (ENSPEMG00000003330) #7	Slc15a3 (ENSPEMG00000006717) #8	Cd6 (ENSPEMG00000010967) #9	Cd5 (ENSPEMG00000011153) #10	Vps37c (ENSPEMG00000027107) #11	Pga5 (ENSPEMG00000008099) #12	Vwce (ENSPEMG00000013366) #13	Ddb1 (ENSPEMG00000012241) #14	Tkfc (ENSPEMG00000015863) #15	Cyb561a3 (ENSPEMG00000007944) #16	Tmem138 (ENSPEMG00000025635) #17	Tmem216 (ENSPEMG00000011742) #18	Cpsf7 (ENSPEMG00000012648) #19	Sdhaf2 (ENSPEMG00000008472) #20	Ppp1r32 (ENSPEMG00000002497) #21	Lrrc10b (ENSPEMG00000007016) #22	Syt7 (ENSPEMG00000011295) #23	Dagla (ENSPEMG00000013710) #24	Myrf (ENSPEMG00000009821) #25	ENSPEMG00000011273 #26	Fen1 (ENSPEMG00000009788) #27	Fads1 (ENSPEMG00000008265) #29	Fads2 (ENSPEMG00000015890) #30	Fads3 (ENSPEMG00000012107) #31	Rab3il1 (ENSPEMG00000011822) #32	ENSPEMG00000012703 #33	Fth1 (ENSPEMG00000017564) #34	ENSPEMG00000020638	Incenp (ENSPEMG00000008252) #35	ENSPEMG00000028067	Asrgl1 (ENSPEMG00000018019)
Prairie vole	MODERN SPECIES	139	Slc15a3 (ENSMOCG00000009628) #8	Cd6 (ENSMOCG00000000759) #9	Cd5 (ENSMOCG00000021640) #10	Vps37c (ENSMOCG00000003731) #11	Pga5 (ENSMOCG00000020424) #12	Vwce (ENSMOCG00000011662) #13	ENSMOCG00000013155	Ddb1 (ENSMOCG00000020499) #14	Tkfc (ENSMOCG00000002905) #15	Cyb561a3 (ENSMOCG00000007624) #16	Tmem138 (ENSMOCG00000020641) #17	Tmem216 (ENSMOCG00000012388) #18	Cpsf7 (ENSMOCG00000000072) #19	Sdhaf2 (ENSMOCG00000001363) #20	Ppp1r32 (ENSMOCG00000013985) #21	Lrrc10b (ENSMOCG00000009416) #22	Syt7 (ENSMOCG00000000989) #23	Dagla (ENSMOCG00000019065) #24	Myrf (ENSMOCG00000014434) #25	ENSMOCG00000020555 #26	ENSMOCG00000015914 #28	Fen1 (ENSMOCG00000013014) #27	Fads1 (ENSMOCG00000020283) #29	Fads2 (ENSMOCG00000003775) #30	Fads3 (ENSMOCG00000018791) #31	Rab3il1 (ENSMOCG00000011001) #32	ENSMOCG00000014676 #33	Fth1 (ENSMOCG00000000310) #34	ENSMOCG00000002414	Incenp (ENSMOCG00000001961) #35	ENSMOCG00000001122
Murinae	ANCESTRAL SPECIES		ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.u	ENSGT00530000063866.f.a.b	ENSGT00530000063866.f.a.a.a
Mus	ANCESTRAL SPECIES		ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.u	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.u	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.u.a	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Mouse	MODERN SPECIES	10	Tmem132a (ENSMUSG00000024736) #7	Slc15a3 (ENSMUSG00000024737) #8	Cd6 (ENSMUSG00000024670) #9	Cd5 (ENSMUSG00000024669) #10	Vps37c (ENSMUSG00000048832) #11	Pga5 (ENSMUSG00000024738) #12	Vwce (ENSMUSG00000043789) #13	Ddb1 (ENSMUSG00000024740) #14	Tkfc (ENSMUSG00000034371) #15	Cyb561a3 (ENSMUSG00000034445) #16	Tmem138 (ENSMUSG00000024666) #17	Tmem216 (ENSMUSG00000024667) #18	Cpsf7 (ENSMUSG00000034820) #19	Sdhaf2 (ENSMUSG00000024668) #20	Ppp1r32 (ENSMUSG00000035179) #21	Lrrc10b (ENSMUSG00000090291) #22	Syt7 (ENSMUSG00000024743) #23	Dagla (ENSMUSG00000035735) #24	Myrf (ENSMUSG00000036098) #25	Tmem258 (ENSMUSG00000036372) #26	Fen1 (ENSMUSG00000024742) #27	Fads1 (ENSMUSG00000010663) #29	Fads2 (ENSMUSG00000024665) #30	Fads3 (ENSMUSG00000024664) #31	Rab3il1 (ENSMUSG00000024663) #32	Best1 (ENSMUSG00000037418) #33	Fth1 (ENSMUSG00000024661) #34	Incenp (ENSMUSG00000024660) #35	Scgb2a2 (ENSMUSG00000096872)	Asrgl1 (ENSMUSG00000024654)	Scgb1a1 (ENSMUSG00000024653)
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a.g #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.u.a	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
spretus	MODERN SPECIES	10	Tmem132a (MGP_SPRETEiJ_G0023616) #7	Slc15a3 (MGP_SPRETEiJ_G0023615) #8	Cd6 (MGP_SPRETEiJ_G0023614) #9	Cd5 (MGP_SPRETEiJ_G0023613) #10	Vps37c (MGP_SPRETEiJ_G0023612) #11	Pga5 (MGP_SPRETEiJ_G0023611) #12	Vwce (MGP_SPRETEiJ_G0023610) #13	Ddb1 (MGP_SPRETEiJ_G0023609) #14	Tkfc (MGP_SPRETEiJ_G0023608) #15	Cyb561a3 (MGP_SPRETEiJ_G0023607) #16	MGP_SPRETEiJ_G0023606 #17	Tmem216 (MGP_SPRETEiJ_G0023605) #18	Cpsf7 (MGP_SPRETEiJ_G0023604) #19	Sdhaf2 (MGP_SPRETEiJ_G0023603) #20	Ppp1r32 (MGP_SPRETEiJ_G0023602) #21	Lrrc10b (MGP_SPRETEiJ_G0023601) #22	Syt7 (MGP_SPRETEiJ_G0023600) #23	Dagla (MGP_SPRETEiJ_G0023599) #24	Myrf (MGP_SPRETEiJ_G0023598) #25	Tmem258 (MGP_SPRETEiJ_G0023597) #26	Fen1 (MGP_SPRETEiJ_G0023596) #27	Fads1 (MGP_SPRETEiJ_G0023595) #29	Fads2 (MGP_SPRETEiJ_G0023594) #30	Fads3 (MGP_SPRETEiJ_G0023593) #31	Rab3il1 (MGP_SPRETEiJ_G0023592) #32	Best1 (MGP_SPRETEiJ_G0023591) #33	Fth1 (MGP_SPRETEiJ_G0023590) #34	Incenp (MGP_SPRETEiJ_G0023589) #35	Scgb2a2 (MGP_SPRETEiJ_G0023588)	Asrgl1 (MGP_SPRETEiJ_G0023587)	Scgb1a1 (MGP_SPRETEiJ_G0023586)
Steppe mouse	MODERN SPECIES	3402	Slc15a3 (ENSMSIG00000030521) #8	Cd6 (ENSMSIG00000030511) #9	ENSMSIG00000030508	Cd5 (ENSMSIG00000030505) #10	Vps37c (ENSMSIG00000030504) #11	ENSMSIG00000030503 #12	Vwce (ENSMSIG00000030497) #13	Ddb1 (ENSMSIG00000030496) #14	Tkfc (ENSMSIG00000030492) #15	Cyb561a3 (ENSMSIG00000030489) #16	ENSMSIG00000030488 #17	ENSMSIG00000030484 #18	ENSMSIG00000030483 #19	ENSMSIG00000030481 #20	Ppp1r32 (ENSMSIG00000030477) #21	Lrrc10b (ENSMSIG00000030476) #22	Syt7 (ENSMSIG00000030431) #23
Ryukyu mouse	MODERN SPECIES	10	Tmem132a (MGP_CAROLIEiJ_G0022702) #7	Slc15a3 (MGP_CAROLIEiJ_G0022701) #8	Cd6 (MGP_CAROLIEiJ_G0022700) #9	Cd5 (MGP_CAROLIEiJ_G0022699) #10	Vps37c (MGP_CAROLIEiJ_G0022698) #11	Pga5 (MGP_CAROLIEiJ_G0022697) #12	Vwce (MGP_CAROLIEiJ_G0022696) #13	Ddb1 (MGP_CAROLIEiJ_G0022695) #14	Tkfc (MGP_CAROLIEiJ_G0022694) #15	Cyb561a3 (MGP_CAROLIEiJ_G0022693) #16	MGP_CAROLIEiJ_G0022692 #17	Tmem216 (MGP_CAROLIEiJ_G0022691) #18	Cpsf7 (MGP_CAROLIEiJ_G0022690) #19	Sdhaf2 (MGP_CAROLIEiJ_G0022689) #20	Ppp1r32 (MGP_CAROLIEiJ_G0022688) #21	Lrrc10b (MGP_CAROLIEiJ_G0022687) #22	Syt7 (MGP_CAROLIEiJ_G0022686) #23	Dagla (MGP_CAROLIEiJ_G0022685) #24	Myrf (MGP_CAROLIEiJ_G0022684) #25	Tmem258 (MGP_CAROLIEiJ_G0022683) #26	Fen1 (MGP_CAROLIEiJ_G0022682) #27	Fads1 (MGP_CAROLIEiJ_G0022681) #29	Fads2 (MGP_CAROLIEiJ_G0022680) #30	Fads3 (MGP_CAROLIEiJ_G0022679) #31	Rab3il1 (MGP_CAROLIEiJ_G0022678) #32	Best1 (MGP_CAROLIEiJ_G0022677) #33	Fth1 (MGP_CAROLIEiJ_G0022676) #34	Incenp (MGP_CAROLIEiJ_G0022675) #35	Asrgl1 (MGP_CAROLIEiJ_G0022674)	Scgb1a1 (MGP_CAROLIEiJ_G0022673)	MGP_CAROLIEiJ_G0022672
Shrew mouse	MODERN SPECIES		Tmem132a (MGP_PahariEiJ_G0014196) #7	Slc15a3 (MGP_PahariEiJ_G0014195) #8	Cd6 (MGP_PahariEiJ_G0014194) #9	Cd5 (MGP_PahariEiJ_G0014193) #10	Vps37c (MGP_PahariEiJ_G0014192) #11	Pga5 (MGP_PahariEiJ_G0014191) #12	Vwce (MGP_PahariEiJ_G0014190) #13	Ddb1 (MGP_PahariEiJ_G0014189) #14	Tkfc (MGP_PahariEiJ_G0014188) #15	Cyb561a3 (MGP_PahariEiJ_G0014187) #16	MGP_PahariEiJ_G0014186 #17	Tmem216 (MGP_PahariEiJ_G0014185) #18	Cpsf7 (MGP_PahariEiJ_G0014184) #19	Sdhaf2 (MGP_PahariEiJ_G0014183) #20	Ppp1r32 (MGP_PahariEiJ_G0014182) #21	Lrrc10b (MGP_PahariEiJ_G0014181) #22	Syt7 (MGP_PahariEiJ_G0014180) #23	MGP_PahariEiJ_G0014179	Myrf (MGP_PahariEiJ_G0014178) #25	Tmem258 (MGP_PahariEiJ_G0014177) #26	Fen1 (MGP_PahariEiJ_G0014176) #27	Fads1 (MGP_PahariEiJ_G0014175) #29	Fads2 (MGP_PahariEiJ_G0014174) #30	Fads3 (MGP_PahariEiJ_G0014173) #31	Rab3il1 (MGP_PahariEiJ_G0014172) #32	Best1 (MGP_PahariEiJ_G0014171) #33	Fth1 (MGP_PahariEiJ_G0014170) #34	Incenp (MGP_PahariEiJ_G0014169) #35	Asrgl1 (MGP_PahariEiJ_G0014168)	Scgb1a1 (MGP_PahariEiJ_G0014167)	MGP_PahariEiJ_G0014166
Rat	MODERN SPECIES		Tmem132a (ENSRNOG00000021338) #7	Slc15a3 (ENSRNOG00000021644) #8	Cd6 (ENSRNOG00000020884) #9	Cd5 (ENSRNOG00000020872) #10	Vps37c (ENSRNOG00000046439) #11	Pga5 (ENSRNOG00000047279) #12	Vwce (ENSRNOG00000060269) #13	Ddb1 (ENSRNOG00000020715) #14	Tkfc (ENSRNOG00000020704) #15	Cyb561a3 (ENSRNOG00000020702) #16	Tmem216 (ENSRNOG00000020692) #18	Cpsf7 (ENSRNOG00000020668) #19	Sdhaf2 (ENSRNOG00000020646) #20	Ppp1r32 (ENSRNOG00000020620) #21	Syt7 (ENSRNOG00000026432) #23	Lrrc10b (ENSRNOG00000030180) #22	LOC108349691 (ENSRNOG00000067027)	Dagla (ENSRNOG00000027264) #24	Myrf (ENSRNOG00000028274) #25	Fen1 (ENSRNOG00000020531) #27	Fads1 (ENSRNOG00000020480) #29	Fads2 (ENSRNOG00000020440) #30	Fads3 (ENSRNOG00000020385) #31	Rab3il1 (ENSRNOG00000020349) #32	AABR07006255.1 (ENSRNOG00000036633)	Best1 (ENSRNOG00000020346) #33	Fth1 (ENSRNOG00000022619) #34	Incenp (ENSRNOG00000032929) #35	ENSRNOG00000062718	Scgb2a1 (ENSRNOG00000023151)	AABR07006242.1 (ENSRNOG00000028909)
Upper Galilee mountains blind mole rat	MODERN SPECIES	545												Tmem216 (ENSNGAG00000003806) #18	Cpsf7 (ENSNGAG00000005031) #19	Sdhaf2 (ENSNGAG00000011983) #20	Ppp1r32 (ENSNGAG00000018343) #21	Lrrc10b (ENSNGAG00000013736) #22	Syt7 (ENSNGAG00000013419) #23	Dagla (ENSNGAG00000021794) #24	Myrf (ENSNGAG00000021024) #25	ENSNGAG00000000579 #26	Fen1 (ENSNGAG00000000449) #27	Fads1 (ENSNGAG00000003043) #29	Fads2 (ENSNGAG00000014321) #30	Fads3 (ENSNGAG00000015661) #31	ENSNGAG00000003987 #32	ENSNGAG00000022803	ENSNGAG00000014932 ##34	Prickle2 (ENSNGAG00000020977)	Adamts9 (ENSNGAG00000023263)	ENSNGAG00000024077	Magi1 (ENSNGAG00000015704)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b.p ##34	ENSGT00730000111073 #35	ENSGT00530000063866.f.b	ENSGT00390000013802.v.b
Hystricomorpha	ANCESTRAL SPECIES	37	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00940000154902.bb.b	ENSGT00950000183045.A.a.a	ENSGT00530000063866.e	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b.p.d ##34	ENSGT00730000111073 #35	ENSGT00940000153747 #12	ENSGT00950000183012.A.b #11	ENSGT00390000017536 #10
Hystricomorpha_a	ANCESTRAL SPECIES	44	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00950000183045.A.a.a	ENSGT00390000013802.u	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b.p.d ##34	ENSGT00730000111073 #35	ENSGT00940000153747 #12	ENSGT00950000183012.A.b #11	ENSGT00390000017536 #10
Hystricomorpha_b	ANCESTRAL SPECIES	80	ENSGT00940000159589	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00950000183045.A.a.a	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b.p.d ##34	ENSGT00730000111073 #35	ENSGT00950000183012.A.b #11	ENSGT00390000017536 #10	ENSGT00940000161029 #9
Long-tailed chinchilla	MODERN SPECIES	218						ENSCLAG00000003953	VWCE (ENSCLAG00000003291) #13	DDB1 (ENSCLAG00000004126) #14	TKFC (ENSCLAG00000003740) #15	CYB561A3 (ENSCLAG00000003653) #16	TMEM138 (ENSCLAG00000003609) #17	TMEM216 (ENSCLAG00000003298) #18	CPSF7 (ENSCLAG00000003174) #19	SDHAF2 (ENSCLAG00000013117) #20	PPP1R32 (ENSCLAG00000011656) #21	LRRC10B (ENSCLAG00000018115) #22	SYT7 (ENSCLAG00000009934) #23	DAGLA (ENSCLAG00000008252) #24	MYRF (ENSCLAG00000007140) #25	ENSCLAG00000006661 #26	FEN1 (ENSCLAG00000008656) #27	FADS1 (ENSCLAG00000008455) #29	FADS2 (ENSCLAG00000008171) #30	FADS3 (ENSCLAG00000008335) #31	RAB3IL1 (ENSCLAG00000007706) #32	BEST1 (ENSCLAG00000006972) #33	ENSCLAG00000006041 ##34	INCENP (ENSCLAG00000005037) #35	VPS37C (ENSCLAG00000005309) #11	CD5 (ENSCLAG00000004976) #10	SLC15A3 (ENSCLAG00000004538) #8
Guinea pig	MODERN SPECIES	65								DDB1 (ENSCPOG00000009956) #14	TKFC (ENSCPOG00000009973) #15	CYB561A3 (ENSCPOG00000019892) #16	TMEM138 (ENSCPOG00000033021) #17	TMEM216 (ENSCPOG00000009977) #18	CPSF7 (ENSCPOG00000009980) #19	SDHAF2 (ENSCPOG00000010348) #20	PPP1R32 (ENSCPOG00000012220) #21	LRRC10B (ENSCPOG00000014403) #22	SYT7 (ENSCPOG00000019369) #23	DAGLA (ENSCPOG00000012891) #24	MYRF (ENSCPOG00000013543) #25	TMEM258 (ENSCPOG00000013553) #26	FEN1 (ENSCPOG00000038134) #27	FADS1 (ENSCPOG00000037066) #29	FADS2 (ENSCPOG00000025656) #30	FADS3 (ENSCPOG00000026811) #31	RAB3IL1 (ENSCPOG00000012622) #32	BEST1 (ENSCPOG00000006105) #33	ENSCPOG00000031917 ##34	INCENP (ENSCPOG00000005701) #35	ENSCPOG00000023404 #12	VPS37C (ENSCPOG00000035274) #11	CD5 (ENSCPOG00000025895) #10
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000034389	ENSHGLG00000037481	ENSHGLG00000035437	ENSHGLG00000038948	ENSHGLG00000029155	ENSHGLG00000046269	ENSHGLG00000033722	ENSHGLG00000002837 #13	ENSHGLG00000046341 #14	TKFC (ENSHGLG00000018883) #15	CYB561A3 (ENSHGLG00000013997) #16	ENSHGLG00000034372 #17	ENSHGLG00000038968 #18	ENSHGLG00000019090 #19	ENSHGLG00000032097 #20	LRRC10B (ENSHGLG00000020706) #22	SYT7 (ENSHGLG00000004485) #23	DAGLA (ENSHGLG00000003887) #24	ENSHGLG00000049174 #26	FEN1 (ENSHGLG00000002899) #27	ENSHGLG00000002762 #29	ENSHGLG00000048948 #31	ENSHGLG00000039242 #30	ENSHGLG00000006364 #31	ENSHGLG00000047074 #32	ENSHGLG00000004202 #33	ENSHGLG00000034974 ##34	ENSHGLG00000048559	ENSHGLG00000013374 #9	ENSHGLG00000013265 #8	ENSHGLG00000048282
Sciuridae	ANCESTRAL SPECIES	40	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b.o.b ##34	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00530000063866.f.b
Marmotini	ANCESTRAL SPECIES	6	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b.o.b ##34	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.v.b.b
Marmotini_b	ANCESTRAL SPECIES	21	ENSGT00940000161414 #7	ENSGT00940000161889 #8	ENSGT00940000161029 #9	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #24	ENSGT00530000063626.a #25	ENSGT00390000010089.f #26	ENSGT00940000155807.a #27	ENSGT00520000061410 #28	ENSGT00950000182990.a.a.b.b #29	ENSGT00950000182990.a.a.a.b.u.a #30	ENSGT00950000182990.a.a.a.b.u.b #31	ENSGT00940000159102 #32	ENSGT00940000158650 #33	ENSGT00950000182841.b.a.a.b.b.o.b ##34	ENSGT00950000182841.b.a.a.b.a.a.b.a #34	ENSGT00730000111073 #35	ENSGT00390000013802.v.b.b
Squirrel	MODERN SPECIES	181	TMEM132A (ENSSTOG00000007846) #7	SLC15A3 (ENSSTOG00000007862) #8	CD6 (ENSSTOG00000007470) #9	CD5 (ENSSTOG00000026365) #10	VPS37C (ENSSTOG00000007504) #11	ENSSTOG00000023073 #12	ENSSTOG00000007513 #13	DDB1 (ENSSTOG00000007552) #14	TKFC (ENSSTOG00000007623) #15	CYB561A3 (ENSSTOG00000007652) #16	TMEM138 (ENSSTOG00000007669) #17	TMEM216 (ENSSTOG00000020858) #18	CPSF7 (ENSSTOG00000007708) #19	SDHAF2 (ENSSTOG00000007755) #20	PPP1R32 (ENSSTOG00000007762) #21	LRRC10B (ENSSTOG00000032386) #22	SYT7 (ENSSTOG00000008542) #23	DAGLA (ENSSTOG00000013182) #24	MYRF (ENSSTOG00000000529) #25	TMEM258 (ENSSTOG00000003383) #26	ENSSTOG00000031633 #28	FEN1 (ENSSTOG00000003387) #27	FADS1 (ENSSTOG00000003391) #29	FADS2 (ENSSTOG00000014489) #30	FADS3 (ENSSTOG00000019661) #31	RAB3IL1 (ENSSTOG00000014496) #32	BEST1 (ENSSTOG00000014508) #33	ENSSTOG00000014521 ##34	ENSSTOG00000034070	INCENP (ENSSTOG00000014541) #35	ENSSTOG00000033144
Arctic ground squirrel	MODERN SPECIES	366	TMEM132A (ENSUPAG00010004114) #7	SLC15A3 (ENSUPAG00010004134) #8	CD6 (ENSUPAG00010004151) #9	CD5 (ENSUPAG00010004200) #10	VPS37C (ENSUPAG00010004210) #11	ENSUPAG00010004227 #12	VWCE (ENSUPAG00010004250) #13	DDB1 (ENSUPAG00010004285) #14	TKFC (ENSUPAG00010004335) #15	CYB561A3 (ENSUPAG00010004371) #16	TMEM138 (ENSUPAG00010004380) #17	TMEM216 (ENSUPAG00010004393) #18	CPSF7 (ENSUPAG00010004406) #19	ENSUPAG00010004422 #20	PPP1R32 (ENSUPAG00010004440) #21	LRRC10B (ENSUPAG00010004468) #22	SYT7 (ENSUPAG00010004474) #23	ENSUPAG00010004590	DAGLA (ENSUPAG00010004596) #24	MYRF (ENSUPAG00010004659) #25	ENSUPAG00010004772 #26	FEN1 (ENSUPAG00010004780) #27	ENSUPAG00010004784 #28	FADS1 (ENSUPAG00010004789) #29	FADS2 (ENSUPAG00010004799) #30	ENSUPAG00010004814 #32	BEST1 (ENSUPAG00010004888) #33	ENSUPAG00010004905 #34	INCENP (ENSUPAG00010004917) #35	ENSUPAG00010004941	ENSUPAG00010004946
Eurasian red squirrel	MODERN SPECIES	2	TMEM132A (ENSSVLG00005010099) #7	SLC15A3 (ENSSVLG00005010014) #8	CD6 (ENSSVLG00005009750) #9	CD5 (ENSSVLG00005009586) #10	VPS37C (ENSSVLG00005009545) #11	ENSSVLG00005009304 #12	VWCE (ENSSVLG00005009126) #13	DDB1 (ENSSVLG00005009066) #14	TKFC (ENSSVLG00005009023) #15	CYB561A3 (ENSSVLG00005008965) #16	TMEM138 (ENSSVLG00005008948) #17	TMEM216 (ENSSVLG00005008859) #18	CPSF7 (ENSSVLG00005008784) #19	SDHAF2 (ENSSVLG00005008680) #20	PPP1R32 (ENSSVLG00005008524) #21	LRRC10B (ENSSVLG00005008474) #22	SYT7 (ENSSVLG00005007921) #23	DAGLA (ENSSVLG00005007644) #24	MYRF (ENSSVLG00005007408) #25	TMEM258 (ENSSVLG00005007336) #26	FEN1 (ENSSVLG00005007324) #27	ENSSVLG00005007308 #28	FADS1 (ENSSVLG00005007252) #29	FADS2 (ENSSVLG00005007178) #30	FADS3 (ENSSVLG00005007116) #31	RAB3IL1 (ENSSVLG00005006928) #32	BEST1 (ENSSVLG00005006784) #33	ENSSVLG00005006740 ##34	ENSSVLG00005006675	ENSSVLG00005006645	ASRGL1 (ENSSVLG00005006616)
Tree shrew	MODERN SPECIES	2974											CYB561A3 (ENSTBEG00000010250) #16	TMEM138 (ENSTBEG00000010461) #17	TMEM216 (ENSTBEG00000010473) #18	SDHAF2 (ENSTBEG00000010497) #20	PPP1R32 (ENSTBEG00000010559) #21	LRRC10B (ENSTBEG00000010680) #22