Tetrapoda	ANCESTRAL SPECIES	130							ENSGT00940000156120.b	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b #31	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.a ##37	ENSGT00730000111073	ENSGT00950000182841.b.a.a.b.b ##37
Amniota	ANCESTRAL SPECIES	41	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b ##34	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073
Mammalia	ANCESTRAL SPECIES	9	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b ##34	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a
Theria	ANCESTRAL SPECIES	8	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b	ENSGT00940000154902.bb.b
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00390000013802.v.b	ENSGT00530000063866
Primates	ANCESTRAL SPECIES		ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37	ENSGT00730000111073	ENSGT00530000063866
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37	ENSGT00730000111073
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00910000147309 #9	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00910000147781	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.b.b.a ##37
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00910000147309 #9	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00910000147781	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.a.a ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a.a #29	ENSGT00520000061410	ENSGT01100000264610 #30	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00910000147781	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.b #12	ENSGT00940000155036.k.a.a.a.b ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a.a #29	ENSGT01100000264610 #30	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00390000017536 #10	ENSGT00910000147781	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.a.a.a ##12	ENSGT00940000155036.k.a.b #12	ENSGT00940000155036.k.a.a.a.b ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a.a #29	ENSGT01100000264610 #30	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00910000147309 #9	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00910000147781	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.b #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a.a #29	ENSGT01100000264610 #30	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Pan	ANCESTRAL SPECIES	1	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00910000147781	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.b.b #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a.a #29	ENSGT01100000264610 #30	ENSGT00910000148081	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Bonobo	MODERN SPECIES	2	SLC15A3 (ENSPPAG00000024363) #7	CD6 (ENSPPAG00000037744) #8	ENSPPAG00000005140 #9	CD5 (ENSPPAG00000040152) #10	VPS37C (ENSPPAG00000032955) #11	ENSPPAG00000042417 #12	VWCE (ENSPPAG00000034720) #13	DDB1 (ENSPPAG00000035343) #14	TKFC (ENSPPAG00000027814) #15	CYB561A3 (ENSPPAG00000041741) #16	TMEM138 (ENSPPAG00000004623) #17	TMEM216 (ENSPPAG00000016205) #18	CPSF7 (ENSPPAG00000028232) #19	SDHAF2 (ENSPPAG00000043200) #20	PPP1R32 (ENSPPAG00000038205) #21	LRRC10B (ENSPPAG00000033664) #22	SYT7 (ENSPPAG00000041839) #23	ENSPPAG00000031575 #24	DAGLA (ENSPPAG00000026492) #25	MYRF (ENSPPAG00000032816) #26	ENSPPAG00000028642 #27	ENSPPAG00000032794 #28	FEN1 (ENSPPAG00000025776) #29	ENSPPAG00000039005 #30	FADS1 (ENSPPAG00000042777) #31	FADS2 (ENSPPAG00000038024) #32	ENSPPAG00000041561 #33	FADS3 (ENSPPAG00000027798) #34	RAB3IL1 (ENSPPAG00000042430) #35	BEST1 (ENSPPAG00000028859) #36	ENSPPAG00000029826 #37
Chimpanzee	MODERN SPECIES	2	CD5 (ENSPTRG00000003729) #10	VPS37C (ENSPTRG00000039991) #11	ENSPTRG00000050302	ENSPTRG00000003731 #12	ENSPTRG00000039058 ##12	VWCE (ENSPTRG00000003736) #13	DDB1 (ENSPTRG00000003737) #14	TKFC (ENSPTRG00000003738) #15	CYB561A3 (ENSPTRG00000003739) #16	TMEM138 (ENSPTRG00000003740) #17	TMEM216 (ENSPTRG00000003741) #18	CPSF7 (ENSPTRG00000003742) #19	SDHAF2 (ENSPTRG00000003743) #20	PPP1R32 (ENSPTRG00000003744) #21	ENSPTRG00000044765	LRRC10B (ENSPTRG00000051448) #22	SYT7 (ENSPTRG00000003745) #23	ENSPTRG00000043757 #24	DAGLA (ENSPTRG00000003747) #25	MYRF (ENSPTRG00000003749) #26	ENSPTRG00000048157 #27	TMEM258 (ENSPTRG00000003750) #28	FEN1 (ENSPTRG00000003751) #29	ENSPTRG00000052250 #30	ENSPTRG00000047132	FADS1 (ENSPTRG00000041542) #31	FADS2 (ENSPTRG00000003753) #32	ENSPTRG00000052244 #33	FADS3 (ENSPTRG00000003754) #34	RAB3IL1 (ENSPTRG00000003755) #35	BEST1 (ENSPTRG00000003756) #36
Human	MODERN SPECIES	2	CD5 (ENSG00000110448) #10	VPS37C (ENSG00000167987) #11	PGA3 (ENSG00000229859) ##12	PGA4 (ENSG00000229183) ##12	PGA5 (ENSG00000256713) ##12	VWCE (ENSG00000167992) #13	DDB1 (ENSG00000167986) #14	TKFC (ENSG00000149476) #15	CYB561A3 (ENSG00000162144) #16	TMEM138 (ENSG00000149483) #17	TMEM216 (ENSG00000187049) #18	CPSF7 (ENSG00000149532) #19	ENSG00000256591	SDHAF2 (ENSG00000167985) #20	PPP1R32 (ENSG00000162148) #21	LRRC10B (ENSG00000204950) #22	SYT7 (ENSG00000011347) #23	DAGLA (ENSG00000134780) #25	MYRF (ENSG00000124920) #26	TMEM258 (ENSG00000134825) #28	FEN1 (ENSG00000168496) #29	FADS2 (ENSG00000134824) #32	FADS1 (ENSG00000149485) #31	FADS3 (ENSG00000221968) #34	RAB3IL1 (ENSG00000167994) #35	BEST1 (ENSG00000167995) #36	FTH1 (ENSG00000167996) ##37	INCENP (ENSG00000149503)	SCGB1D1 (ENSG00000168515)	SCGB2A1 (ENSG00000124939)	SCGB1D2 (ENSG00000124935)
Orangutan	MODERN SPECIES	2	SLC15A3 (ENSPPYG00000003199) #7	CD6 (ENSPPYG00000003198) #8	CD5 (ENSPPYG00000003197) #10	VPS37C (ENSPPYG00000003196) #11	ENSPPYG00000003195 ##12	VWCE (ENSPPYG00000003194) #13	DDB1 (ENSPPYG00000003193) #14	TKFC (ENSPPYG00000003192) #15	CYB561A3 (ENSPPYG00000003191) #16	ENSPPYG00000003190 #17	TMEM216 (ENSPPYG00000037321) #18	CPSF7 (ENSPPYG00000003188) #19	SDHAF2 (ENSPPYG00000003187) #20	ENSPPYG00000040375	PPP1R32 (ENSPPYG00000003186) #21	LRRC10B (ENSPPYG00000003185) #22	SYT7 (ENSPPYG00000003184) #23	ENSPPYG00000034762 ##24	DAGLA (ENSPPYG00000003183) #25	ENSPPYG00000003182 #27	MYRF (ENSPPYG00000003180) #26	TMEM258 (ENSPPYG00000025909) #28	ENSPPYG00000039974 #30	ENSPPYG00000038295	FEN1 (ENSPPYG00000003179) #29	FADS1 (ENSPPYG00000003178) #31	ENSPPYG00000033771 #33	FADS2 (ENSPPYG00000003177) #32	FADS3 (ENSPPYG00000003176) #34	ENSPPYG00000003175 #35	BEST1 (ENSPPYG00000003174) #36
Gibbon	MODERN SPECIES	19	TMEM132A (ENSNLEG00000013672)	SLC15A3 (ENSNLEG00000013695) #7	CD6 (ENSNLEG00000013729) #8	ENSNLEG00000001949 #10	VPS37C (ENSNLEG00000001991) #11	ENSNLEG00000035595 ##12	VWCE (ENSNLEG00000031665) #13	DDB1 (ENSNLEG00000002022) #14	TKFC (ENSNLEG00000002383) #15	ENSNLEG00000027216	TMEM138 (ENSNLEG00000002484) #17	TMEM216 (ENSNLEG00000002496) #18	CPSF7 (ENSNLEG00000002529) #19	SDHAF2 (ENSNLEG00000002607) #20	PPP1R32 (ENSNLEG00000002622) #21	LRRC10B (ENSNLEG00000018909) #22	ENSNLEG00000034649 #23	DAGLA (ENSNLEG00000002700) #25	ENSNLEG00000002708 #27	MYRF (ENSNLEG00000003069) #26	TMEM258 (ENSNLEG00000003117) #28	ENSNLEG00000035922 #28	FEN1 (ENSNLEG00000003126) #29	ENSNLEG00000028758	FADS1 (ENSNLEG00000034179) #31	ENSNLEG00000003138	FADS2 (ENSNLEG00000003214) #32	ENSNLEG00000031350 #33	ENSNLEG00000003139 #34	RAB3IL1 (ENSNLEG00000003273) #35	BEST1 (ENSNLEG00000003280) #36
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00910000147309 #9	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00910000147781	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00910000147498	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.c.a #12	ENSGT00940000155036.k.a.d #12	ENSGT00940000155036.k.a.c.b.b #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT01090000263457	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00910000147309 #9	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.d #12	ENSGT00940000155036.k.a.c.b.b #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00910000147348	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT01090000263457	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00980000199420	ENSGT00910000147498
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.c.a #12	ENSGT00940000155036.k.a.c.b.a #12	ENSGT00940000155036.k.a.c.b.b #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00910000147348	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00980000199420	ENSGT00910000147498	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.c.b.a.b #12	ENSGT00940000155036.k.a.c.b.a.a #12	ENSGT00940000161089.a #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.d.a.b ##37	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.b.b.a.b.b.a	ENSGT00730000111073
Rhesus	MODERN SPECIES	5	CD6 (ENSMMUG00000044417) #8	CD5 (ENSMMUG00000015018) #10	VPS37C (ENSMMUG00000015019) #11	PGA4 (ENSMMUG00000037611) #12	ENSMMUG00000059343 #12	ENSMMUG00000042208 #12	VWCE (ENSMMUG00000002688) #13	DDB1 (ENSMMUG00000002691) #14	TKFC (ENSMMUG00000002692) #15	CYB561A3 (ENSMMUG00000022372) #16	TMEM138 (ENSMMUG00000022373) #17	TMEM216 (ENSMMUG00000002365) #18	CPSF7 (ENSMMUG00000015280) #19	SDHAF2 (ENSMMUG00000015281) #20	PPP1R32 (ENSMMUG00000014913) #21	LRRC10B (ENSMMUG00000031111) #22	SYT7 (ENSMMUG00000005122) #23	ENSMMUG00000020911 #24	DAGLA (ENSMMUG00000049301) #25	MYRF (ENSMMUG00000006655) #26	TMEM258 (ENSMMUG00000006656) #28	FEN1 (ENSMMUG00000006657) #29	FADS1 (ENSMMUG00000013798) #31	FADS2 (ENSMMUG00000000327) #32	FADS3 (ENSMMUG00000000328) #34	RAB3IL1 (ENSMMUG00000015148) #35	BEST1 (ENSMMUG00000015147) #36	FTH1 (ENSMMUG00000015146) ##37	ENSMMUG00000062874	INCENP (ENSMMUG00000004420)	SCGB1D1 (ENSMMUG00000062870)
Pig-tailed macaque	MODERN SPECIES	433							VWCE (ENSMNEG00000035182) #13	DDB1 (ENSMNEG00000031559) #14	TKFC (ENSMNEG00000030238) #15	CYB561A3 (ENSMNEG00000006486) #16	TMEM138 (ENSMNEG00000042127) #17	TMEM216 (ENSMNEG00000038513) #18	CPSF7 (ENSMNEG00000029585) #19	SDHAF2 (ENSMNEG00000031085) #20	PPP1R32 (ENSMNEG00000036834) #21	LRRC10B (ENSMNEG00000008176) #22	SYT7 (ENSMNEG00000045146) #23	ENSMNEG00000028500	ENSMNEG00000030898 #24	DAGLA (ENSMNEG00000018117) #25	MYRF (ENSMNEG00000040464) #26	TMEM258 (ENSMNEG00000042170) #28	FEN1 (ENSMNEG00000018554) #29	ENSMNEG00000035608	FADS1 (ENSMNEG00000002294) #31	FADS2 (ENSMNEG00000038871) #32	ENSMNEG00000043874 #33	ENSMNEG00000035458	ENSMNEG00000016534	FADS3 (ENSMNEG00000045543) #34	RAB3IL1 (ENSMNEG00000041630) #35
Cercopithecinae_b	ANCESTRAL SPECIES	16	ENSGT00940000161889 #7	ENSGT00910000147309 #9	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.k.a.d #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00910000147348	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT01090000263457	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00980000199420	ENSGT00910000147498
Cercopithecinae_d	ANCESTRAL SPECIES	6							ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00910000147348	ENSGT00940000157180 #23	ENSGT00390000017839.o.b.b.a.a.b #24	ENSGT00940000161192 #25	ENSGT00500000045299 #27	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00910000148833	ENSGT00950000182990.a.a.b.b #31	ENSGT01090000263457	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00980000199420
Sooty mangabey	MODERN SPECIES	518							VWCE (ENSCATG00000021513) #13	DDB1 (ENSCATG00000044495) #14	TKFC (ENSCATG00000044633) #15	CYB561A3 (ENSCATG00000041666) #16	TMEM138 (ENSCATG00000038658) #17	TMEM216 (ENSCATG00000032394) #18	CPSF7 (ENSCATG00000042801) #19	SDHAF2 (ENSCATG00000042999) #20	PPP1R32 (ENSCATG00000039418) #21	LRRC10B (ENSCATG00000004145) #22	ENSCATG00000042271	SYT7 (ENSCATG00000043350) #23	ENSCATG00000038917 #24	DAGLA (ENSCATG00000032611) #25	ENSCATG00000015757 #27	MYRF (ENSCATG00000042261) #26	TMEM258 (ENSCATG00000044378) #28	FEN1 (ENSCATG00000006690) #29	ENSCATG00000003311	FADS1 (ENSCATG00000037775) #31	ENSCATG00000041629 #33	ENSCATG00000044239	FADS2 (ENSCATG00000043575) #32	ENSCATG00000002961	FADS3 (ENSCATG00000042722) #34
Olive baboon	MODERN SPECIES	3	TMEM132A (ENSPANG00000005951)	SLC15A3 (ENSPANG00000015258) #7	CD6 (ENSPANG00000003105) #8	CD5 (ENSPANG00000017382) #10	VPS37C (ENSPANG00000038012) #11	ENSPANG00000012130 #12	VWCE (ENSPANG00000000243) #13	DDB1 (ENSPANG00000000242) #14	TKFC (ENSPANG00000002763) #15	CYB561A3 (ENSPANG00000015259) #16	TMEM138 (ENSPANG00000005451) #17	TMEM216 (ENSPANG00000013645) #18	ENSPANG00000006037 #19	SDHAF2 (ENSPANG00000023744) #20	PPP1R32 (ENSPANG00000011447) #21	LRRC10B (ENSPANG00000023823) #22	SYT7 (ENSPANG00000022956) #23	ENSPANG00000035141 #24	DAGLA (ENSPANG00000013480) #25	MYRF (ENSPANG00000013413) #26	TMEM258 (ENSPANG00000005281) #28	FEN1 (ENSPANG00000011882) #29	FADS1 (ENSPANG00000013646) #31	FADS2 (ENSPANG00000015652) #32	ENSPANG00000035579 #33	FADS3 (ENSPANG00000016422) #34	RAB3IL1 (ENSPANG00000023599) #35	BEST1 (ENSPANG00000016663) #36	FTH1 (ENSPANG00000016662) ##37	ENSPANG00000032665	INCENP (ENSPANG00000016661)
Vervet Monkey	MODERN SPECIES		SLC15A3 (ENSCSAG00000006268) #7	CD6 (ENSCSAG00000006284) #8	CD5 (ENSCSAG00000006294) #10	VPS37C (ENSCSAG00000006298) #11	ENSCSAG00000006333 #12	ENSCSAG00000006360 #12	VWCE (ENSCSAG00000006378) #13	DDB1 (ENSCSAG00000006392) #14	TKFC (ENSCSAG00000006398) #15	CYB561A3 (ENSCSAG00000006404) #16	TMEM138 (ENSCSAG00000006409) #17	TMEM216 (ENSCSAG00000006412) #18	CPSF7 (ENSCSAG00000006414) #19	SDHAF2 (ENSCSAG00000006418) #20	PPP1R32 (ENSCSAG00000006429) #21	LRRC10B (ENSCSAG00000019177) #22	SYT7 (ENSCSAG00000006435) #23	DAGLA (ENSCSAG00000006443) #25	MYRF (ENSCSAG00000006452) #26	TMEM258 (ENSCSAG00000006457) #28	FEN1 (ENSCSAG00000006461) #29	FADS1 (ENSCSAG00000006469) #31	FADS2 (ENSCSAG00000006475) #32	FADS3 (ENSCSAG00000006479) #34	RAB3IL1 (ENSCSAG00000006483) #35	ENSCSAG00000006491 ##37	BEST1 (ENSCSAG00000006498) #36	INCENP (ENSCSAG00000006508)	SCGB1D1 (ENSCSAG00000006515)	SCGB2A1 (ENSCSAG00000006522)	SCGB1D2 (ENSCSAG00000006525)
Platyrrhini	ANCESTRAL SPECIES	15	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT01100000264610 #30	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.b ##37	ENSGT00730000111073
Cebidae	ANCESTRAL SPECIES		ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.b ##37	ENSGT00730000111073	ENSGT00530000063866.d
Marmoset	MODERN SPECIES	2	CD5 (ENSCJAG00000017364) #10	VPS37C (ENSCJAG00000054957) #11	PGA (ENSCJAG00000019394) ##12	VWCE (ENSCJAG00000019384) #13	DDB1 (ENSCJAG00000019319) #14	ENSCJAG00000077363	TKFC (ENSCJAG00000019305) #15	CYB561A3 (ENSCJAG00000019302) #16	TMEM138 (ENSCJAG00000039370) #17	ENSCJAG00000076596	TMEM216 (ENSCJAG00000019299) #18	CPSF7 (ENSCJAG00000019282) #19	SDHAF2 (ENSCJAG00000019276) #20	ENSCJAG00000021865	PPP1R32 (ENSCJAG00000019272) #21	LRRC10B (ENSCJAG00000021864) #22	SYT7 (ENSCJAG00000019261) #23	ENSCJAG00000086417	DAGLA (ENSCJAG00000019248) #25	TMEM258 (ENSCJAG00000019216) #28	FEN1 (ENSCJAG00000055903) #29	FADS1 (ENSCJAG00000047481) #31	FADS2 (ENSCJAG00000019168) #32	ENSCJAG00000046538 #33	RAB3IL1 (ENSCJAG00000019137) #35	BEST1 (ENSCJAG00000019095) #36	ENSCJAG00000047003 ##37	INCENP (ENSCJAG00000019069)	SCGB1D1 (ENSCJAG00000019048)	SCGB2A1 (ENSCJAG00000019050)	SCGB1D2 (ENSCJAG00000058578)
Cebidae_a	ANCESTRAL SPECIES	18	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000183316 #33	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b #37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a.b.a.a.a.b ##37	ENSGT00730000111073	ENSGT00530000063866.d
Capuchin	MODERN SPECIES	316	ZNF615 (ENSCCAG00000019724)	ZNF614 (ENSCCAG00000033877)	ZNF432 (ENSCCAG00000029125)	ZNF841 (ENSCCAG00000037212)	ENSCCAG00000023342	ZNF613 (ENSCCAG00000037685)	ZNF577 (ENSCCAG00000017201)	FPR1 (ENSCCAG00000037885)	HAS1 (ENSCCAG00000029812)	SPACA6 (ENSCCAG00000028070)	SIGLEC14 (ENSCCAG00000025883)	SIGLEC5 (ENSCCAG00000033168)	ENSCCAG00000037723	ENSCCAG00000023120	CEACAM18 (ENSCCAG00000025499)	LRRC10B (ENSCCAG00000017654) #22	SYT7 (ENSCCAG00000036354) #23	DAGLA (ENSCCAG00000026937) #25	MYRF (ENSCCAG00000021105) #26	TMEM258 (ENSCCAG00000022859) #28	FEN1 (ENSCCAG00000024050) #29	FADS1 (ENSCCAG00000034736) #31	ENSCCAG00000036895 #33	FADS2 (ENSCCAG00000020221) #32	FADS3 (ENSCCAG00000036626) #34	RAB3IL1 (ENSCCAG00000023993) #35	BEST1 (ENSCCAG00000022350) #36	ENSCCAG00000027979 ##37	INCENP (ENSCCAG00000018638)	SCGB1D1 (ENSCCAG00000032346)	SCGB2A1 (ENSCCAG00000030614)
Mas night monkey	MODERN SPECIES	336	TMEM132A (ENSANAG00000030870)	SLC15A3 (ENSANAG00000030455) #7	CD6 (ENSANAG00000034253) #8	CD5 (ENSANAG00000037540) #10	VPS37C (ENSANAG00000029520) #11	ENSANAG00000034439 ##12	VWCE (ENSANAG00000038397) #13	DDB1 (ENSANAG00000021878) #14	TKFC (ENSANAG00000036361) #15	CYB561A3 (ENSANAG00000026202) #16	TMEM138 (ENSANAG00000031827) #17	TMEM216 (ENSANAG00000038321) #18	CPSF7 (ENSANAG00000024635) #19	SDHAF2 (ENSANAG00000025872) #20	PPP1R32 (ENSANAG00000037082) #21	LRRC10B (ENSANAG00000011048) #22	SYT7 (ENSANAG00000020025) #23	DAGLA (ENSANAG00000026250) #25	MYRF (ENSANAG00000037558) #26	TMEM258 (ENSANAG00000035195) #28	FEN1 (ENSANAG00000019971) #29	ENSANAG00000019246 #30	FADS1 (ENSANAG00000029557) #31	FADS2 (ENSANAG00000035889) #32	ENSANAG00000038346 #33	FADS3 (ENSANAG00000022958) #34	RAB3IL1 (ENSANAG00000035875) #35	BEST1 (ENSANAG00000037419) #36	ENSANAG00000032960 ##37	INCENP (ENSANAG00000035094)	SCGB1D1 (ENSANAG00000037619)
Strepsirrhini	ANCESTRAL SPECIES	20	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802.v.b
Lemuriformes	ANCESTRAL SPECIES	14	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802.v.b
Mouse lemur	MODERN SPECIES	27	SLC15A3 (ENSMICG00000027981) #7	CD6 (ENSMICG00000011288) #8	CD5 (ENSMICG00000013628) #10	VPS37C (ENSMICG00000034100) #11	ENSMICG00000013645 ##12	VWCE (ENSMICG00000013662) #13	DDB1 (ENSMICG00000013703) #14	TKFC (ENSMICG00000013737) #15	CYB561A3 (ENSMICG00000013766) #16	TMEM138 (ENSMICG00000047581) #17	TMEM216 (ENSMICG00000013785) #18	CPSF7 (ENSMICG00000013788) #19	SDHAF2 (ENSMICG00000013808) #20	ENSMICG00000027025	PPP1R32 (ENSMICG00000012749) #21	LRRC10B (ENSMICG00000030558) #22	SYT7 (ENSMICG00000013836) #23	DAGLA (ENSMICG00000013847) #25	MYRF (ENSMICG00000013870) #26	TMEM258 (ENSMICG00000013894) #28	ENSMICG00000029413	FADS1 (ENSMICG00000013915) #31	FADS2 (ENSMICG00000004145) #32	FADS3 (ENSMICG00000032887) #34	RAB3IL1 (ENSMICG00000005824) #35	BEST1 (ENSMICG00000005843) #36	ENSMICG00000035165 ##37	ENSMICG00000031901	ENSMICG00000044535	INCENP (ENSMICG00000005864)	ENSMICG00000047195
Lemuriformes_a	ANCESTRAL SPECIES	3	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802.v.b
Greater bamboo lemur	MODERN SPECIES	101	SLC15A3 (ENSPSMG00000020924) #7	CD6 (ENSPSMG00000020999) #8	CD5 (ENSPSMG00000021018) #10	VPS37C (ENSPSMG00000021028) #11	ENSPSMG00000021056	ENSPSMG00000021105 ##12	VWCE (ENSPSMG00000021179) #13	DDB1 (ENSPSMG00000021236) #14	TKFC (ENSPSMG00000021295) #15	CYB561A3 (ENSPSMG00000021318) #16	TMEM138 (ENSPSMG00000021329) #17	TMEM216 (ENSPSMG00000021339) #18	CPSF7 (ENSPSMG00000021376) #19	ENSPSMG00000021389	PPP1R32 (ENSPSMG00000021425) #21	LRRC10B (ENSPSMG00000021435) #22	SYT7 (ENSPSMG00000021529) #23	DAGLA (ENSPSMG00000021602) #25	ENSPSMG00000021614 #26	TMEM258 (ENSPSMG00000021620) #28	FEN1 (ENSPSMG00000021625) #29	ENSPSMG00000021632	ENSPSMG00000021638	FADS1 (ENSPSMG00000021668) #31	FADS2 (ENSPSMG00000021745) #32	FADS3 (ENSPSMG00000021967) #34	RAB3IL1 (ENSPSMG00000022098) #35	BEST1 (ENSPSMG00000022118) #36	ENSPSMG00000022147 ##37	INCENP (ENSPSMG00000022199)	ENSPSMG00000022239
Coquerels sifaka	MODERN SPECIES	904				CD5 (ENSPCOG00000027120) #10	VPS37C (ENSPCOG00000014185) #11	ENSPCOG00000020865 ##12	VWCE (ENSPCOG00000026303) #13	DDB1 (ENSPCOG00000015176) #14	TKFC (ENSPCOG00000002100) #15	CYB561A3 (ENSPCOG00000022967) #16	TMEM138 (ENSPCOG00000008236) #17	ENSPCOG00000016422 #18	CPSF7 (ENSPCOG00000011976) #19	SDHAF2 (ENSPCOG00000018683) #20	PPP1R32 (ENSPCOG00000018077) #21	LRRC10B (ENSPCOG00000013431) #22	SYT7 (ENSPCOG00000027641) #23	DAGLA (ENSPCOG00000020445) #25	MYRF (ENSPCOG00000020191) #26	TMEM258 (ENSPCOG00000016788) #28	FEN1 (ENSPCOG00000012915) #29	ENSPCOG00000028372	FADS1 (ENSPCOG00000025908) #31	FADS2 (ENSPCOG00000020555) #32	FADS3 (ENSPCOG00000027151) #34	RAB3IL1 (ENSPCOG00000014649) #35	BEST1 (ENSPCOG00000018035) #36	ENSPCOG00000018833 ##37	ENSPCOG00000022535
Bushbaby	MODERN SPECIES	255			ENSOGAG00000033713	ENSOGAG00000027956	ENSOGAG00000016091 ##12	VWCE (ENSOGAG00000016095) #13	DDB1 (ENSOGAG00000016103) #14	TKFC (ENSOGAG00000016120) #15	CYB561A3 (ENSOGAG00000016129) #16	TMEM138 (ENSOGAG00000016132) #17	TMEM216 (ENSOGAG00000016134) #18	CPSF7 (ENSOGAG00000027958) #19	ENSOGAG00000016145	SDHAF2 (ENSOGAG00000016141) #20	PPP1R32 (ENSOGAG00000013699) #21	LRRC10B (ENSOGAG00000024321) #22	SYT7 (ENSOGAG00000033441) #23	DAGLA (ENSOGAG00000012574) #25	MYRF (ENSOGAG00000010786) #26	TMEM258 (ENSOGAG00000010793) #28	FEN1 (ENSOGAG00000024238) #29	FADS1 (ENSOGAG00000010794) #31	FADS2 (ENSOGAG00000004500) #32	FADS3 (ENSOGAG00000028613) #34	RAB3IL1 (ENSOGAG00000004501) #35	BEST1 (ENSOGAG00000026226) #36	ENSOGAG00000025354 ##37	INCENP (ENSOGAG00000012974)	ENSOGAG00000030358	SCGB2A1 (ENSOGAG00000013831)	ASRGL1 (ENSOGAG00000000405)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00390000013802.v.b	ENSGT00530000063866.f.b
Tree shrew	MODERN SPECIES	2974											CYB561A3 (ENSTBEG00000010250) #16	TMEM138 (ENSTBEG00000010461) #17	TMEM216 (ENSTBEG00000010473) #18	SDHAF2 (ENSTBEG00000010497) #20	PPP1R32 (ENSTBEG00000010559) #21	LRRC10B (ENSTBEG00000010680) #22
Glires	ANCESTRAL SPECIES	1	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036.l ##12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866.f.b	ENSGT00390000013802.v.b
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p ##37	ENSGT00730000111073	ENSGT00530000063866.f.b	ENSGT00390000013802.v.b
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Lesser Egyptian jerboa	MODERN SPECIES	145	Tmem132a (ENSJJAG00000019362)	Slc15a3 (ENSJJAG00000018033) #7	Cd6 (ENSJJAG00000017281) #8	Cd5 (ENSJJAG00000014422) #10	Vps37c (ENSJJAG00000013830) #11	Pga5 (ENSJJAG00000013252)	Vwce (ENSJJAG00000012536) #13	Ddb1 (ENSJJAG00000017769) #14	Tkfc (ENSJJAG00000012794) #15	Cyb561a3 (ENSJJAG00000011193) #16	Tmem138 (ENSJJAG00000007221) #17	Tmem216 (ENSJJAG00000020647) #18	Cpsf7 (ENSJJAG00000019390) #19	Sdhaf2 (ENSJJAG00000018790) #20	Ppp1r32 (ENSJJAG00000017237) #21	Lrrc10b (ENSJJAG00000013551) #22	Syt7 (ENSJJAG00000013923) #23	Dagla (ENSJJAG00000002892) #25	Myrf (ENSJJAG00000010756) #26	Tmem258 (ENSJJAG00000022691) #28	Fen1 (ENSJJAG00000012958) #29	ENSJJAG00000002498	Fads1 (ENSJJAG00000022490) #31	Fads2 (ENSJJAG00000021145) #32	Fads3 (ENSJJAG00000020671) #34	Rab3il1 (ENSJJAG00000013036) #35	ENSJJAG00000011109 #36	Fth1 (ENSJJAG00000010241) ##37	Incenp (ENSJJAG00000003541)
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u	ENSGT00530000063866.f.a
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u	ENSGT00950000183045.A.a.a
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.d ##37	ENSGT00730000111073	ENSGT00390000013802.u	ENSGT00950000183045.A.a.a
Chinese hamster chok1gshd	MODERN SPECIES	401	Slc15a3 (ENSCGRG00001023689) #7	ENSCGRG00001010151	Cd6 (ENSCGRG00001015074) #8	Cd5 (ENSCGRG00001021859) #10	Vps37c (ENSCGRG00001022544) #11	Pga5 (ENSCGRG00001021989)	Vwce (ENSCGRG00001017748) #13	Ddb1 (ENSCGRG00001016599) #14	Tkfc (ENSCGRG00001018294) #15	Cyb561a3 (ENSCGRG00001011459) #16	Tmem138 (ENSCGRG00001009418) #17	Tmem216 (ENSCGRG00001006200) #18	Cpsf7 (ENSCGRG00001020382) #19	Sdhaf2 (ENSCGRG00001018789) #20	Ppp1r32 (ENSCGRG00001010292) #21	Lrrc10b (ENSCGRG00001011211) #22	Syt7 (ENSCGRG00001022753) #23	Dagla (ENSCGRG00001004102) #25	Myrf (ENSCGRG00001021116) #26	ENSCGRG00001013240 #28	Fen1 (ENSCGRG00001009889) #29	Fads1 (ENSCGRG00001018831) #31	Fads2 (ENSCGRG00001013858) #32	Fads3 (ENSCGRG00001017095) #34	Rab3il1 (ENSCGRG00001015063) #35	ENSCGRG00001014139 #36	FTH1 (ENSCGRG00001020220) ##37	Incenp (ENSCGRG00001019028)	Scgb2a2 (ENSCGRG00001015765)	Asrgl1 (ENSCGRG00001019390)	Scgb1a1 (ENSCGRG00001017835)
Golden Hamster	MODERN SPECIES	617	Tmem132a (ENSMAUG00000011465)	Slc15a3 (ENSMAUG00000012683) #7	Cd6 (ENSMAUG00000012522) #8	Cd5 (ENSMAUG00000011872) #10	Vps37c (ENSMAUG00000011856) #11	Pga5 (ENSMAUG00000012386)	Vwce (ENSMAUG00000013253) #13	Ddb1 (ENSMAUG00000012926) #14	Tkfc (ENSMAUG00000011622) #15	Cyb561a3 (ENSMAUG00000011671) #16	Tmem138 (ENSMAUG00000011913) #17	Tmem216 (ENSMAUG00000012971) #18	Cpsf7 (ENSMAUG00000013020) #19	Sdhaf2 (ENSMAUG00000011818) #20	Ppp1r32 (ENSMAUG00000011958) #21	Lrrc10b (ENSMAUG00000002510) #22	Syt7 (ENSMAUG00000012225) #23	Dagla (ENSMAUG00000013406) #25	Myrf (ENSMAUG00000013986) #26	Tmem258 (ENSMAUG00000011933) #28	Fen1 (ENSMAUG00000012401) #29	ENSMAUG00000012365	Fads1 (ENSMAUG00000013100) #31	Fads2 (ENSMAUG00000012801) #32	Fads3 (ENSMAUG00000012190) #34	Rab3il1 (ENSMAUG00000012007) #35	ENSMAUG00000013033 #36	Fth1 (ENSMAUG00000013659) ##37	Incenp (ENSMAUG00000013427)	Asrgl1 (ENSMAUG00000012422)	ENSMAUG00000012867
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00520000061410	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Northern American deer mouse	MODERN SPECIES		Tmem132a (ENSPEMG00000003330)	Slc15a3 (ENSPEMG00000006717) #7	Cd6 (ENSPEMG00000010967) #8	Cd5 (ENSPEMG00000011153) #10	Vps37c (ENSPEMG00000027107) #11	Pga5 (ENSPEMG00000008099)	Vwce (ENSPEMG00000013366) #13	Ddb1 (ENSPEMG00000012241) #14	Tkfc (ENSPEMG00000015863) #15	Cyb561a3 (ENSPEMG00000007944) #16	Tmem138 (ENSPEMG00000025635) #17	Tmem216 (ENSPEMG00000011742) #18	Cpsf7 (ENSPEMG00000012648) #19	Sdhaf2 (ENSPEMG00000008472) #20	Ppp1r32 (ENSPEMG00000002497) #21	Lrrc10b (ENSPEMG00000007016) #22	Syt7 (ENSPEMG00000011295) #23	Dagla (ENSPEMG00000013710) #25	Myrf (ENSPEMG00000009821) #26	ENSPEMG00000011273 #28	Fen1 (ENSPEMG00000009788) #29	Fads1 (ENSPEMG00000008265) #31	Fads2 (ENSPEMG00000015890) #32	Fads3 (ENSPEMG00000012107) #34	Rab3il1 (ENSPEMG00000011822) #35	ENSPEMG00000012703 #36	Fth1 (ENSPEMG00000017564) ##37	ENSPEMG00000020638	Incenp (ENSPEMG00000008252)	ENSPEMG00000028067	Asrgl1 (ENSPEMG00000018019)
Prairie vole	MODERN SPECIES	139	Slc15a3 (ENSMOCG00000009628) #7	Cd6 (ENSMOCG00000000759) #8	Cd5 (ENSMOCG00000021640) #10	Vps37c (ENSMOCG00000003731) #11	Pga5 (ENSMOCG00000020424)	Vwce (ENSMOCG00000011662) #13	ENSMOCG00000013155	Ddb1 (ENSMOCG00000020499) #14	Tkfc (ENSMOCG00000002905) #15	Cyb561a3 (ENSMOCG00000007624) #16	Tmem138 (ENSMOCG00000020641) #17	Tmem216 (ENSMOCG00000012388) #18	Cpsf7 (ENSMOCG00000000072) #19	Sdhaf2 (ENSMOCG00000001363) #20	Ppp1r32 (ENSMOCG00000013985) #21	Lrrc10b (ENSMOCG00000009416) #22	Syt7 (ENSMOCG00000000989) #23	Dagla (ENSMOCG00000019065) #25	Myrf (ENSMOCG00000014434) #26	ENSMOCG00000020555 #28	ENSMOCG00000015914	Fen1 (ENSMOCG00000013014) #29	Fads1 (ENSMOCG00000020283) #31	Fads2 (ENSMOCG00000003775) #32	Fads3 (ENSMOCG00000018791) #34	Rab3il1 (ENSMOCG00000011001) #35	ENSMOCG00000014676 #36	Fth1 (ENSMOCG00000000310) ##37	ENSMOCG00000002414	Incenp (ENSMOCG00000001961)	ENSMOCG00000001122
Murinae	ANCESTRAL SPECIES		ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u	ENSGT00530000063866.f.a.b	ENSGT00530000063866.f.a.a.a
Mus	ANCESTRAL SPECIES		ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u.a	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Mouse	MODERN SPECIES	10	Tmem132a (ENSMUSG00000024736)	Slc15a3 (ENSMUSG00000024737) #7	Cd6 (ENSMUSG00000024670) #8	Cd5 (ENSMUSG00000024669) #10	Vps37c (ENSMUSG00000048832) #11	Pga5 (ENSMUSG00000024738)	Vwce (ENSMUSG00000043789) #13	Ddb1 (ENSMUSG00000024740) #14	Tkfc (ENSMUSG00000034371) #15	Cyb561a3 (ENSMUSG00000034445) #16	Tmem138 (ENSMUSG00000024666) #17	Tmem216 (ENSMUSG00000024667) #18	Cpsf7 (ENSMUSG00000034820) #19	Sdhaf2 (ENSMUSG00000024668) #20	Ppp1r32 (ENSMUSG00000035179) #21	Lrrc10b (ENSMUSG00000090291) #22	Syt7 (ENSMUSG00000024743) #23	Dagla (ENSMUSG00000035735) #25	Myrf (ENSMUSG00000036098) #26	Tmem258 (ENSMUSG00000036372) #28	Fen1 (ENSMUSG00000024742) #29	Fads1 (ENSMUSG00000010663) #31	Fads2 (ENSMUSG00000024665) #32	Fads3 (ENSMUSG00000024664) #34	Rab3il1 (ENSMUSG00000024663) #35	Best1 (ENSMUSG00000037418) #36	Fth1 (ENSMUSG00000024661) ##37	Incenp (ENSMUSG00000024660)	Scgb2a2 (ENSMUSG00000096872)	Asrgl1 (ENSMUSG00000024654)	Scgb1a1 (ENSMUSG00000024653)
Mus_C	ANCESTRAL SPECIES	25	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a.g #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.u.a	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
spretus	MODERN SPECIES	10	Tmem132a (MGP_SPRETEiJ_G0023616)	Slc15a3 (MGP_SPRETEiJ_G0023615) #7	Cd6 (MGP_SPRETEiJ_G0023614) #8	Cd5 (MGP_SPRETEiJ_G0023613) #10	Vps37c (MGP_SPRETEiJ_G0023612) #11	Pga5 (MGP_SPRETEiJ_G0023611)	Vwce (MGP_SPRETEiJ_G0023610) #13	Ddb1 (MGP_SPRETEiJ_G0023609) #14	Tkfc (MGP_SPRETEiJ_G0023608) #15	Cyb561a3 (MGP_SPRETEiJ_G0023607) #16	MGP_SPRETEiJ_G0023606 #17	Tmem216 (MGP_SPRETEiJ_G0023605) #18	Cpsf7 (MGP_SPRETEiJ_G0023604) #19	Sdhaf2 (MGP_SPRETEiJ_G0023603) #20	Ppp1r32 (MGP_SPRETEiJ_G0023602) #21	Lrrc10b (MGP_SPRETEiJ_G0023601) #22	Syt7 (MGP_SPRETEiJ_G0023600) #23	Dagla (MGP_SPRETEiJ_G0023599) #25	Myrf (MGP_SPRETEiJ_G0023598) #26	Tmem258 (MGP_SPRETEiJ_G0023597) #28	Fen1 (MGP_SPRETEiJ_G0023596) #29	Fads1 (MGP_SPRETEiJ_G0023595) #31	Fads2 (MGP_SPRETEiJ_G0023594) #32	Fads3 (MGP_SPRETEiJ_G0023593) #34	Rab3il1 (MGP_SPRETEiJ_G0023592) #35	Best1 (MGP_SPRETEiJ_G0023591) #36	Fth1 (MGP_SPRETEiJ_G0023590) ##37	Incenp (MGP_SPRETEiJ_G0023589)	Scgb2a2 (MGP_SPRETEiJ_G0023588)	Asrgl1 (MGP_SPRETEiJ_G0023587)	Scgb1a1 (MGP_SPRETEiJ_G0023586)
Steppe mouse	MODERN SPECIES	3402	Slc15a3 (ENSMSIG00000030521) #7	Cd6 (ENSMSIG00000030511) #8	ENSMSIG00000030508	Cd5 (ENSMSIG00000030505) #10	Vps37c (ENSMSIG00000030504) #11	ENSMSIG00000030503	Vwce (ENSMSIG00000030497) #13	Ddb1 (ENSMSIG00000030496) #14	Tkfc (ENSMSIG00000030492) #15	Cyb561a3 (ENSMSIG00000030489) #16	ENSMSIG00000030488 #17	ENSMSIG00000030484 #18	ENSMSIG00000030483 #19	ENSMSIG00000030481 #20	Ppp1r32 (ENSMSIG00000030477) #21	Lrrc10b (ENSMSIG00000030476) #22	Syt7 (ENSMSIG00000030431) #23
Ryukyu mouse	MODERN SPECIES	10	Tmem132a (MGP_CAROLIEiJ_G0022702)	Slc15a3 (MGP_CAROLIEiJ_G0022701) #7	Cd6 (MGP_CAROLIEiJ_G0022700) #8	Cd5 (MGP_CAROLIEiJ_G0022699) #10	Vps37c (MGP_CAROLIEiJ_G0022698) #11	Pga5 (MGP_CAROLIEiJ_G0022697)	Vwce (MGP_CAROLIEiJ_G0022696) #13	Ddb1 (MGP_CAROLIEiJ_G0022695) #14	Tkfc (MGP_CAROLIEiJ_G0022694) #15	Cyb561a3 (MGP_CAROLIEiJ_G0022693) #16	MGP_CAROLIEiJ_G0022692 #17	Tmem216 (MGP_CAROLIEiJ_G0022691) #18	Cpsf7 (MGP_CAROLIEiJ_G0022690) #19	Sdhaf2 (MGP_CAROLIEiJ_G0022689) #20	Ppp1r32 (MGP_CAROLIEiJ_G0022688) #21	Lrrc10b (MGP_CAROLIEiJ_G0022687) #22	Syt7 (MGP_CAROLIEiJ_G0022686) #23	Dagla (MGP_CAROLIEiJ_G0022685) #25	Myrf (MGP_CAROLIEiJ_G0022684) #26	Tmem258 (MGP_CAROLIEiJ_G0022683) #28	Fen1 (MGP_CAROLIEiJ_G0022682) #29	Fads1 (MGP_CAROLIEiJ_G0022681) #31	Fads2 (MGP_CAROLIEiJ_G0022680) #32	Fads3 (MGP_CAROLIEiJ_G0022679) #34	Rab3il1 (MGP_CAROLIEiJ_G0022678) #35	Best1 (MGP_CAROLIEiJ_G0022677) #36	Fth1 (MGP_CAROLIEiJ_G0022676) ##37	Incenp (MGP_CAROLIEiJ_G0022675)	Asrgl1 (MGP_CAROLIEiJ_G0022674)	Scgb1a1 (MGP_CAROLIEiJ_G0022673)	MGP_CAROLIEiJ_G0022672
Shrew mouse	MODERN SPECIES		Tmem132a (MGP_PahariEiJ_G0014196)	Slc15a3 (MGP_PahariEiJ_G0014195) #7	Cd6 (MGP_PahariEiJ_G0014194) #8	Cd5 (MGP_PahariEiJ_G0014193) #10	Vps37c (MGP_PahariEiJ_G0014192) #11	Pga5 (MGP_PahariEiJ_G0014191)	Vwce (MGP_PahariEiJ_G0014190) #13	Ddb1 (MGP_PahariEiJ_G0014189) #14	Tkfc (MGP_PahariEiJ_G0014188) #15	Cyb561a3 (MGP_PahariEiJ_G0014187) #16	MGP_PahariEiJ_G0014186 #17	Tmem216 (MGP_PahariEiJ_G0014185) #18	Cpsf7 (MGP_PahariEiJ_G0014184) #19	Sdhaf2 (MGP_PahariEiJ_G0014183) #20	Ppp1r32 (MGP_PahariEiJ_G0014182) #21	Lrrc10b (MGP_PahariEiJ_G0014181) #22	Syt7 (MGP_PahariEiJ_G0014180) #23	MGP_PahariEiJ_G0014179	Myrf (MGP_PahariEiJ_G0014178) #26	Tmem258 (MGP_PahariEiJ_G0014177) #28	Fen1 (MGP_PahariEiJ_G0014176) #29	Fads1 (MGP_PahariEiJ_G0014175) #31	Fads2 (MGP_PahariEiJ_G0014174) #32	Fads3 (MGP_PahariEiJ_G0014173) #34	Rab3il1 (MGP_PahariEiJ_G0014172) #35	Best1 (MGP_PahariEiJ_G0014171) #36	Fth1 (MGP_PahariEiJ_G0014170) ##37	Incenp (MGP_PahariEiJ_G0014169)	Asrgl1 (MGP_PahariEiJ_G0014168)	Scgb1a1 (MGP_PahariEiJ_G0014167)	MGP_PahariEiJ_G0014166
Rat	MODERN SPECIES		Tmem132a (ENSRNOG00000021338)	Slc15a3 (ENSRNOG00000021644) #7	Cd6 (ENSRNOG00000020884) #8	Cd5 (ENSRNOG00000020872) #10	Vps37c (ENSRNOG00000046439) #11	Pga5 (ENSRNOG00000047279)	Vwce (ENSRNOG00000060269) #13	Ddb1 (ENSRNOG00000020715) #14	Tkfc (ENSRNOG00000020704) #15	Cyb561a3 (ENSRNOG00000020702) #16	Tmem216 (ENSRNOG00000020692) #18	Cpsf7 (ENSRNOG00000020668) #19	Sdhaf2 (ENSRNOG00000020646) #20	Ppp1r32 (ENSRNOG00000020620) #21	Syt7 (ENSRNOG00000026432) #23	Lrrc10b (ENSRNOG00000030180) #22	LOC108349691 (ENSRNOG00000067027)	Dagla (ENSRNOG00000027264) #25	Myrf (ENSRNOG00000028274) #26	Fen1 (ENSRNOG00000020531) #29	Fads1 (ENSRNOG00000020480) #31	Fads2 (ENSRNOG00000020440) #32	Fads3 (ENSRNOG00000020385) #34	Rab3il1 (ENSRNOG00000020349) #35	AABR07006255.1 (ENSRNOG00000036633)	Best1 (ENSRNOG00000020346) #36	Fth1 (ENSRNOG00000022619) ##37	Incenp (ENSRNOG00000032929)	ENSRNOG00000062718	Scgb2a1 (ENSRNOG00000023151)	AABR07006242.1 (ENSRNOG00000028909)
Upper Galilee mountains blind mole rat	MODERN SPECIES	545												Tmem216 (ENSNGAG00000003806) #18	Cpsf7 (ENSNGAG00000005031) #19	Sdhaf2 (ENSNGAG00000011983) #20	Ppp1r32 (ENSNGAG00000018343) #21	Lrrc10b (ENSNGAG00000013736) #22	Syt7 (ENSNGAG00000013419) #23	Dagla (ENSNGAG00000021794) #25	Myrf (ENSNGAG00000021024) #26	ENSNGAG00000000579 #28	Fen1 (ENSNGAG00000000449) #29	Fads1 (ENSNGAG00000003043) #31	Fads2 (ENSNGAG00000014321) #32	Fads3 (ENSNGAG00000015661) #34	ENSNGAG00000003987 #35	ENSNGAG00000022803	ENSNGAG00000014932 ##37	Prickle2 (ENSNGAG00000020977)	Adamts9 (ENSNGAG00000023263)	ENSNGAG00000024077	Magi1 (ENSNGAG00000015704)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p ##37	ENSGT00730000111073	ENSGT00530000063866.f.b	ENSGT00390000013802.v.b
Hystricomorpha	ANCESTRAL SPECIES	37	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00940000154902.bb.b	ENSGT00950000183045.A.a.a	ENSGT00530000063866.e	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p.d ##37	ENSGT00730000111073	ENSGT00940000153747	ENSGT00950000183012.A.b #11	ENSGT00390000017536 #10
Hystricomorpha_a	ANCESTRAL SPECIES	44	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00950000183045.A.a.a	ENSGT00390000013802.u	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p.d ##37	ENSGT00730000111073	ENSGT00940000153747	ENSGT00950000183012.A.b #11	ENSGT00390000017536 #10
Hystricomorpha_b	ANCESTRAL SPECIES	80	ENSGT00940000159589	ENSGT01030000234573.B.c.b.b	ENSGT00940000159914	ENSGT00390000007552.f	ENSGT00940000154902.bb.a	ENSGT00950000183045.A.a.a	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.p.d ##37	ENSGT00730000111073	ENSGT00950000183012.A.b #11	ENSGT00390000017536 #10	ENSGT00940000161029 #8
Long-tailed chinchilla	MODERN SPECIES	218						ENSCLAG00000003953	VWCE (ENSCLAG00000003291) #13	DDB1 (ENSCLAG00000004126) #14	TKFC (ENSCLAG00000003740) #15	CYB561A3 (ENSCLAG00000003653) #16	TMEM138 (ENSCLAG00000003609) #17	TMEM216 (ENSCLAG00000003298) #18	CPSF7 (ENSCLAG00000003174) #19	SDHAF2 (ENSCLAG00000013117) #20	PPP1R32 (ENSCLAG00000011656) #21	LRRC10B (ENSCLAG00000018115) #22	SYT7 (ENSCLAG00000009934) #23	DAGLA (ENSCLAG00000008252) #25	MYRF (ENSCLAG00000007140) #26	ENSCLAG00000006661 #28	FEN1 (ENSCLAG00000008656) #29	FADS1 (ENSCLAG00000008455) #31	FADS2 (ENSCLAG00000008171) #32	FADS3 (ENSCLAG00000008335) #34	RAB3IL1 (ENSCLAG00000007706) #35	BEST1 (ENSCLAG00000006972) #36	ENSCLAG00000006041 ##37	INCENP (ENSCLAG00000005037)	VPS37C (ENSCLAG00000005309) #11	CD5 (ENSCLAG00000004976) #10	SLC15A3 (ENSCLAG00000004538) #7
Guinea pig	MODERN SPECIES	65								DDB1 (ENSCPOG00000009956) #14	TKFC (ENSCPOG00000009973) #15	CYB561A3 (ENSCPOG00000019892) #16	TMEM138 (ENSCPOG00000033021) #17	TMEM216 (ENSCPOG00000009977) #18	CPSF7 (ENSCPOG00000009980) #19	SDHAF2 (ENSCPOG00000010348) #20	PPP1R32 (ENSCPOG00000012220) #21	LRRC10B (ENSCPOG00000014403) #22	SYT7 (ENSCPOG00000019369) #23	DAGLA (ENSCPOG00000012891) #25	MYRF (ENSCPOG00000013543) #26	TMEM258 (ENSCPOG00000013553) #28	FEN1 (ENSCPOG00000038134) #29	FADS1 (ENSCPOG00000037066) #31	FADS2 (ENSCPOG00000025656) #32	FADS3 (ENSCPOG00000026811) #34	RAB3IL1 (ENSCPOG00000012622) #35	BEST1 (ENSCPOG00000006105) #36	ENSCPOG00000031917 ##37	INCENP (ENSCPOG00000005701)	ENSCPOG00000023404	VPS37C (ENSCPOG00000035274) #11	CD5 (ENSCPOG00000025895) #10
Naked mole-rat female	MODERN SPECIES	14	ENSHGLG00000034389	ENSHGLG00000037481	ENSHGLG00000035437	ENSHGLG00000038948	ENSHGLG00000029155	ENSHGLG00000046269	ENSHGLG00000033722	ENSHGLG00000002837 #13	ENSHGLG00000046341 #14	TKFC (ENSHGLG00000018883) #15	CYB561A3 (ENSHGLG00000013997) #16	ENSHGLG00000034372 #17	ENSHGLG00000038968 #18	ENSHGLG00000019090 #19	ENSHGLG00000032097 #20	LRRC10B (ENSHGLG00000020706) #22	SYT7 (ENSHGLG00000004485) #23	DAGLA (ENSHGLG00000003887) #25	ENSHGLG00000049174 #28	FEN1 (ENSHGLG00000002899) #29	ENSHGLG00000002762 #31	ENSHGLG00000048948 #34	ENSHGLG00000039242 #32	ENSHGLG00000006364 #34	ENSHGLG00000047074 #35	ENSHGLG00000004202 #36	ENSHGLG00000034974 ##37	ENSHGLG00000048559	ENSHGLG00000013374 #8	ENSHGLG00000013265 #7	ENSHGLG00000048282
Sciuridae	ANCESTRAL SPECIES	40	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.o.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866.f.b
Marmotini	ANCESTRAL SPECIES	6	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.o.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.v.b.b
Marmotini_b	ANCESTRAL SPECIES	21	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.o.b ##37	ENSGT00950000182841.b.a.a.b.a.a.b.a ##37	ENSGT00730000111073	ENSGT00390000013802.v.b.b
Squirrel	MODERN SPECIES	181	TMEM132A (ENSSTOG00000007846)	SLC15A3 (ENSSTOG00000007862) #7	CD6 (ENSSTOG00000007470) #8	CD5 (ENSSTOG00000026365) #10	VPS37C (ENSSTOG00000007504) #11	ENSSTOG00000023073	ENSSTOG00000007513 #13	DDB1 (ENSSTOG00000007552) #14	TKFC (ENSSTOG00000007623) #15	CYB561A3 (ENSSTOG00000007652) #16	TMEM138 (ENSSTOG00000007669) #17	TMEM216 (ENSSTOG00000020858) #18	CPSF7 (ENSSTOG00000007708) #19	SDHAF2 (ENSSTOG00000007755) #20	PPP1R32 (ENSSTOG00000007762) #21	LRRC10B (ENSSTOG00000032386) #22	SYT7 (ENSSTOG00000008542) #23	DAGLA (ENSSTOG00000013182) #25	MYRF (ENSSTOG00000000529) #26	TMEM258 (ENSSTOG00000003383) #28	ENSSTOG00000031633	FEN1 (ENSSTOG00000003387) #29	FADS1 (ENSSTOG00000003391) #31	FADS2 (ENSSTOG00000014489) #32	FADS3 (ENSSTOG00000019661) #34	RAB3IL1 (ENSSTOG00000014496) #35	BEST1 (ENSSTOG00000014508) #36	ENSSTOG00000014521 ##37	ENSSTOG00000034070	INCENP (ENSSTOG00000014541)	ENSSTOG00000033144
Arctic ground squirrel	MODERN SPECIES	366	TMEM132A (ENSUPAG00010004114)	SLC15A3 (ENSUPAG00010004134) #7	CD6 (ENSUPAG00010004151) #8	CD5 (ENSUPAG00010004200) #10	VPS37C (ENSUPAG00010004210) #11	ENSUPAG00010004227	VWCE (ENSUPAG00010004250) #13	DDB1 (ENSUPAG00010004285) #14	TKFC (ENSUPAG00010004335) #15	CYB561A3 (ENSUPAG00010004371) #16	TMEM138 (ENSUPAG00010004380) #17	TMEM216 (ENSUPAG00010004393) #18	CPSF7 (ENSUPAG00010004406) #19	ENSUPAG00010004422 #20	PPP1R32 (ENSUPAG00010004440) #21	LRRC10B (ENSUPAG00010004468) #22	SYT7 (ENSUPAG00010004474) #23	ENSUPAG00010004590	DAGLA (ENSUPAG00010004596) #25	MYRF (ENSUPAG00010004659) #26	ENSUPAG00010004772 #28	FEN1 (ENSUPAG00010004780) #29	ENSUPAG00010004784	FADS1 (ENSUPAG00010004789) #31	FADS2 (ENSUPAG00010004799) #32	ENSUPAG00010004814 #35	BEST1 (ENSUPAG00010004888) #36	ENSUPAG00010004905 ##37	INCENP (ENSUPAG00010004917)	ENSUPAG00010004941	ENSUPAG00010004946
Eurasian red squirrel	MODERN SPECIES	2	TMEM132A (ENSSVLG00005010099)	SLC15A3 (ENSSVLG00005010014) #7	CD6 (ENSSVLG00005009750) #8	CD5 (ENSSVLG00005009586) #10	VPS37C (ENSSVLG00005009545) #11	ENSSVLG00005009304	VWCE (ENSSVLG00005009126) #13	DDB1 (ENSSVLG00005009066) #14	TKFC (ENSSVLG00005009023) #15	CYB561A3 (ENSSVLG00005008965) #16	TMEM138 (ENSSVLG00005008948) #17	TMEM216 (ENSSVLG00005008859) #18	CPSF7 (ENSSVLG00005008784) #19	SDHAF2 (ENSSVLG00005008680) #20	PPP1R32 (ENSSVLG00005008524) #21	LRRC10B (ENSSVLG00005008474) #22	SYT7 (ENSSVLG00005007921) #23	DAGLA (ENSSVLG00005007644) #25	MYRF (ENSSVLG00005007408) #26	TMEM258 (ENSSVLG00005007336) #28	FEN1 (ENSSVLG00005007324) #29	ENSSVLG00005007308	FADS1 (ENSSVLG00005007252) #31	FADS2 (ENSSVLG00005007178) #32	FADS3 (ENSSVLG00005007116) #34	RAB3IL1 (ENSSVLG00005006928) #35	BEST1 (ENSSVLG00005006784) #36	ENSSVLG00005006740 ##37	ENSSVLG00005006675	ENSSVLG00005006645	ASRGL1 (ENSSVLG00005006616)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d	ENSGT00940000153747.c.a.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d	ENSGT00940000153747.c.a.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.c.a.a	ENSGT00940000153747.d	ENSGT00940000153747.c.a.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Pecora	ANCESTRAL SPECIES	13	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.c.a.a.a	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.e #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.e.b ##28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Percora_a	ANCESTRAL SPECIES	16	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.c.a.a.a	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.e #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.e.b ##28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Bovidae	ANCESTRAL SPECIES	16	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.c.a.a.a	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.e #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.e.b ##28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Bovinae	ANCESTRAL SPECIES	24	ENSGT00940000153747.c.b.a.a.b	ENSGT00940000164310.e	ENSGT00940000153747.c.a.a.b	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.e #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.e.b ##28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Bos	ANCESTRAL SPECIES	11	ENSGT00940000164310.e	ENSGT00940000153747.c.a.a.b	ENSGT00940000153747.c.a.b.b.a.b	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.e #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.e.b ##28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000153747.c.a.a.b	ENSGT00940000153747.c.a.b.b.a.b	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.b.b.b.b.a.a.a.a	ENSGT00940000153899.a.a.e #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.e.b ##28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Cow	MODERN SPECIES	21	ENSBTAG00000013214	ENSBTAG00000040257	ENSBTAG00000051501	PAG8 (ENSBTAG00000019226)	PGA5 (ENSBTAG00000014761) #12	VWCE (ENSBTAG00000021568) #13	DDB1 (ENSBTAG00000021569) #14	TKFC (ENSBTAG00000018201) #15	CYB561A3 (ENSBTAG00000018202) #16	TMEM138 (ENSBTAG00000021604) #17	ENSBTAG00000053752	TMEM216 (ENSBTAG00000021517) #18	CPSF7 (ENSBTAG00000015263) #19	SDHAF2 (ENSBTAG00000015266) #20	PPP1R32 (ENSBTAG00000014830) #21	LRRC10B (ENSBTAG00000047786) #22	SYT7 (ENSBTAG00000019947) #23	ENSBTAG00000048988	DAGLA (ENSBTAG00000013942) #25	MYRF (ENSBTAG00000006990) #26	TMEM258 (ENSBTAG00000032557) ##28	FEN1 (ENSBTAG00000000064) #29	ENSBTAG00000053898	FADS1 (ENSBTAG00000022294) #31	FADS2 (ENSBTAG00000015505) #32	FADS3 (ENSBTAG00000015511) #34	RAB3IL1 (ENSBTAG00000015745) #35	BEST1 (ENSBTAG00000011186) #36	FTH1 (ENSBTAG00000011184) ##37	INCENP (ENSBTAG00000050061)	SCGB1D (ENSBTAG00000040070)
Hybrid Bos Indicus	MODERN SPECIES	21	ENSBIXG00005009294	ENSBIXG00005009315	ENSBIXG00005009319	ENSBIXG00005009328	ENSBIXG00005000485	ENSBIXG00005009365 #12	DDB1 (ENSBIXG00005009414) #14	TKFC (ENSBIXG00005000509) #15	CYB561A3 (ENSBIXG00005000536) #16	TMEM138 (ENSBIXG00005009582) #17	ENSBIXG00005009590	TMEM216 (ENSBIXG00005009610) #18	CPSF7 (ENSBIXG00005009640) #19	SDHAF2 (ENSBIXG00005007414) #20	PPP1R32 (ENSBIXG00005005369) #21	LRRC10B (ENSBIXG00005006411) #22	ENSBIXG00005007419	SYT7 (ENSBIXG00005009873) #23	DAGLA (ENSBIXG00005009918) #25	MYRF (ENSBIXG00005000732) #26	TMEM258 (ENSBIXG00005010011) ##28	FEN1 (ENSBIXG00005010025) #29	FADS1 (ENSBIXG00005010078) #31	ENSBIXG00005010140 #32	FADS3 (ENSBIXG00005000842) #34	ENSBIXG00005010391 #35	BEST1 (ENSBIXG00005010422) #36	ENSBIXG00005000888 ##37	INCENP (ENSBIXG00005010485)	ENSBIXG00005010508	ENSBIXG00005010523
Caprinae	ANCESTRAL SPECIES	20	ENSGT00940000153747.c.b.a.b.b.b.a.a.a.a.a.b.a.a.a.b	ENSGT00940000153747.c.b.a.a.b	ENSGT00940000153747.c.a.a.b	ENSGT00940000153747.c.a.b.b.a.a	ENSGT00940000153747.c.a.b.b.b	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.e #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.e.b ##28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.a.b.n.a.b.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Goat	MODERN SPECIES	21	PAG-2 (ENSCHIG00000020849)	ENSCHIG00000011963	ENSCHIG00000007600	ENSCHIG00000016744	PAG-8 (ENSCHIG00000024659)	ENSCHIG00000016267 #12	VWCE (ENSCHIG00000025655) #13	DDB1 (ENSCHIG00000014969) #14	TKFC (ENSCHIG00000022752) #15	CYB561A3 (ENSCHIG00000012169) #16	TMEM138 (ENSCHIG00000017453) #17	TMEM216 (ENSCHIG00000023674) #18	CPSF7 (ENSCHIG00000014655) #19	SDHAF2 (ENSCHIG00000023310) #20	PPP1R32 (ENSCHIG00000012512) #21	LRRC10B (ENSCHIG00000001840) #22	SYT7 (ENSCHIG00000009808) #23	DAGLA (ENSCHIG00000020106) #25	MYRF (ENSCHIG00000003036) #26	ENSCHIG00000018241 ##28	FEN1 (ENSCHIG00000009155) #29	ENSCHIG00000013437	FADS1 (ENSCHIG00000022314) #31	ENSCHIG00000015460 #32	FADS3 (ENSCHIG00000026956) #34	RAB3IL1 (ENSCHIG00000018161) #35	BEST1 (ENSCHIG00000005599) #36	FTH1 (ENSCHIG00000018949) ##37	INCENP (ENSCHIG00000023449)	ENSCHIG00000013354	ENSCHIG00000018172
Rambouillet Sheep	MODERN SPECIES	13	PAG6 (ENSOARG00020021174)	ENSOARG00020021269	ENSOARG00020021295	ENSOARG00020021356	ENSOARG00020021461	ENSOARG00020021518	ENSOARG00020021557 #12	DDB1 (ENSOARG00020012642) #14	TKFC (ENSOARG00020012889) #15	CYB561A3 (ENSOARG00020013047) #16	TMEM138 (ENSOARG00020013156) #17	TMEM216 (ENSOARG00020013196) #18	CPSF7 (ENSOARG00020013322) #19	SDHAF2 (ENSOARG00020013473) #20	PPP1R32 (ENSOARG00020013625) #21	LRRC10B (ENSOARG00020013826) #22	SYT7 (ENSOARG00020013930) #23	DAGLA (ENSOARG00020016399) #25	MYRF (ENSOARG00020016571) #26	ENSOARG00020017205 ##28	FEN1 (ENSOARG00020017260) #29	ENSOARG00020017287	FADS1 (ENSOARG00020017320) #31	ENSOARG00020017431 #32	FADS3 (ENSOARG00020017693) #34	RAB3IL1 (ENSOARG00020017922) #35	BEST1 (ENSOARG00020018322) #36	FTH1 (ENSOARG00020018402) ##37	INCENP (ENSOARG00020018586)	ENSOARG00020018723	ENSOARG00020018768
Siberian musk deer	MODERN SPECIES	1224	ENSMMSG00000013417	ENSMMSG00000013209	ENSMMSG00000013178	ENSMMSG00000015215	ENSMMSG00000015159	ENSMMSG00000015100 #12	VWCE (ENSMMSG00000015060) #13	DDB1 (ENSMMSG00000014990) #14	TKFC (ENSMMSG00000014953) #15	CYB561A3 (ENSMMSG00000014925) #16	TMEM138 (ENSMMSG00000014906) #17	TMEM216 (ENSMMSG00000014877) #18	CPSF7 (ENSMMSG00000014827) #19	SDHAF2 (ENSMMSG00000014730) #20	PPP1R32 (ENSMMSG00000014635) #21	LRRC10B (ENSMMSG00000014610) #22	SYT7 (ENSMMSG00000014430) #23	DAGLA (ENSMMSG00000014359) #25	MYRF (ENSMMSG00000014220) #26	ENSMMSG00000014177 ##28	FEN1 (ENSMMSG00000014163) #29	ENSMMSG00000014149	FADS1 (ENSMMSG00000014104) #31	ENSMMSG00000014017 #32	FADS3 (ENSMMSG00000013946) #34	RAB3IL1 (ENSMMSG00000013829) #35	BEST1 (ENSMMSG00000013766) #36	ENSMMSG00000013740 ##37	INCENP (ENSMMSG00000013713)	ENSMMSG00000013681	ENSMMSG00000013664
Yarkand deer	MODERN SPECIES	11	ENSCHYG00000008525	ENSCHYG00000008537	ENSCHYG00000008602	ENSCHYG00000008622	ENSCHYG00000008674	ENSCHYG00000008738 #12	VWCE (ENSCHYG00000008847) #13	DDB1 (ENSCHYG00000008990) #14	TKFC (ENSCHYG00000009565) #15	CYB561A3 (ENSCHYG00000009714) #16	ENSCHYG00000009852 #17	TMEM216 (ENSCHYG00000009986) #18	CPSF7 (ENSCHYG00000010078) #19	SDHAF2 (ENSCHYG00000010299) #20	PPP1R32 (ENSCHYG00000010513) #21	LRRC10B (ENSCHYG00000010729) #22	SYT7 (ENSCHYG00000010777) #23	DAGLA (ENSCHYG00000011343) #25	MYRF (ENSCHYG00000011601) #26	ENSCHYG00000012385 ##28	FEN1 (ENSCHYG00000012431) #29	ENSCHYG00000012454	FADS1 (ENSCHYG00000012487) #31	ENSCHYG00000012672 #32	FADS3 (ENSCHYG00000013278) #34	RAB3IL1 (ENSCHYG00000013498) #35	BEST1 (ENSCHYG00000014024) #36	ENSCHYG00000014166 ##37	ENSCHYG00000014297	INCENP (ENSCHYG00000014341)	ENSCHYG00000014447
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.h #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.n.b ##37	ENSGT00390000009588.nb	ENSGT00730000111073	ENSGT00530000063866
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.h #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a ##37	ENSGT00390000009588.nb	ENSGT00730000111073	ENSGT00950000183045.A.a.a
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.h #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.b.a.b ##34	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a ##37	ENSGT00390000009588.nb	ENSGT00730000111073
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d.e	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.h #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.a ##37	ENSGT00390000009588.nb	ENSGT00730000111073	ENSGT00950000183045.A.a.a
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d.e	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a.h #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.a.a.a.a ##37	ENSGT00390000009588.nb	ENSGT00730000111073	ENSGT00950000183045.A.a.a
Narwhal	MODERN SPECIES	314	TMEM132A (ENSMMNG00015017145)	SLC15A3 (ENSMMNG00015017156) #7	CD6 (ENSMMNG00015017194) #8	CD5 (ENSMMNG00015017263) #10	VPS37C (ENSMMNG00015017302) #11	ENSMMNG00015017329 #12	VWCE (ENSMMNG00015017386) #13	DDB1 (ENSMMNG00015017421) #14	TKFC (ENSMMNG00015017547) #15	CYB561A3 (ENSMMNG00015017602) #16	TMEM138 (ENSMMNG00015017644) #17	ENSMMNG00015017662 #18	CPSF7 (ENSMMNG00015017720) #19	SDHAF2 (ENSMMNG00015017763) #20	PPP1R32 (ENSMMNG00015017820) #21	LRRC10B (ENSMMNG00015017915) #22	SYT7 (ENSMMNG00015018005) #23	DAGLA (ENSMMNG00015018165) #25	MYRF (ENSMMNG00015018267) #26	ENSMMNG00015018376 #28	FEN1 (ENSMMNG00015018398) #29	ENSMMNG00015018407	FADS1 (ENSMMNG00015018422) #31	FADS2 (ENSMMNG00015018459) #32	FADS3 (ENSMMNG00015018534) #34	RAB3IL1 (ENSMMNG00015018609) #35	BEST1 (ENSMMNG00015018677) #36	ENSMMNG00015018730 ##37	ENSMMNG00015018773	INCENP (ENSMMNG00015018796)	ASRGL1 (ENSMMNG00015018816)
Beluga whale	MODERN SPECIES	7	CD6 (ENSDLEG00000001412) #8	CD5 (ENSDLEG00000001394) #10	VPS37C (ENSDLEG00000001384) #11	ENSDLEG00000001363	PGA5 (ENSDLEG00000001340) #12	VWCE (ENSDLEG00000001246) #13	DDB1 (ENSDLEG00000001179) #14	TKFC (ENSDLEG00000000962) #15	CYB561A3 (ENSDLEG00000000930) #16	TMEM138 (ENSDLEG00000000919) #17	ENSDLEG00000000898 #18	ENSDLEG00000000886 #19	ENSDLEG00000000879 #19	SDHAF2 (ENSDLEG00000000871) #20	PPP1R32 (ENSDLEG00000000838) #21	LRRC10B (ENSDLEG00000000828) #22	SYT7 (ENSDLEG00000000798) #23	DAGLA (ENSDLEG00000000737) #25	MYRF (ENSDLEG00000000555) #26	ENSDLEG00000000496 #28	FEN1 (ENSDLEG00000000484) #29	ENSDLEG00000000478	ENSDLEG00000000465 ##34	FADS2 (ENSDLEG00000000450) #32	FADS3 (ENSDLEG00000000318) #34	RAB3IL1 (ENSDLEG00000000259) #35	ENSDLEG00000000215 #36	FTH1 (ENSDLEG00000000166) ##37	ENSDLEG00000000149	INCENP (ENSDLEG00000000094)	ASRGL1 (ENSDLEG00000000069)
Vaquita	MODERN SPECIES	19	CD6 (ENSPSNG00000011358) #8	CD5 (ENSPSNG00000012012) #10	VPS37C (ENSPSNG00000012121) #11	ENSPSNG00000012177	ENSPSNG00000012371	ENSPSNG00000012502 #12	VWCE (ENSPSNG00000012655) #13	DDB1 (ENSPSNG00000012899) #14	TKFC (ENSPSNG00000012988) #15	CYB561A3 (ENSPSNG00000013060) #16	TMEM138 (ENSPSNG00000013156) #17	ENSPSNG00000013236 #18	CPSF7 (ENSPSNG00000013407) #19	SDHAF2 (ENSPSNG00000013585) #20	PPP1R32 (ENSPSNG00000013764) #21	LRRC10B (ENSPSNG00000014099) #22	SYT7 (ENSPSNG00000014330) #23	DAGLA (ENSPSNG00000015388) #25	MYRF (ENSPSNG00000015696) #26	TMEM258 (ENSPSNG00000016151) #28	FEN1 (ENSPSNG00000016213) #29	ENSPSNG00000016241	FADS1 (ENSPSNG00000016302) #31	FADS2 (ENSPSNG00000016437) #32	FADS3 (ENSPSNG00000016702) #34	RAB3IL1 (ENSPSNG00000016838) #35	ENSPSNG00000017070 #36	ENSPSNG00000017157	INCENP (ENSPSNG00000017213)	ASRGL1 (ENSPSNG00000017251)	ENSPSNG00000017310
Dolphin	MODERN SPECIES	2766																LRRC10B (ENSTTRG00000011219) #22	SYT7 (ENSTTRG00000011221) #23	DAGLA (ENSTTRG00000011224) #25	MYRF (ENSTTRG00000011229) #26	TMEM258 (ENSTTRG00000011236) #28	FEN1 (ENSTTRG00000011237) #29	FADS1 (ENSTTRG00000021381) #31
Sperm whale	MODERN SPECIES	7	ENSPCTG00005005717	ENSPCTG00005005730	MS4A2 (ENSPCTG00005005762)	MS4A1 (ENSPCTG00005005858)	ENSPCTG00005005912	CD6 (ENSPCTG00005006147) #8	VPS37C (ENSPCTG00005006455) #11	ENSPCTG00005006468	ENSPCTG00005006515	CYB561A3 (ENSPCTG00005006609) #16	TMEM138 (ENSPCTG00005006640) #17	TMEM216 (ENSPCTG00005006683) #18	CPSF7 (ENSPCTG00005006786) #19	SDHAF2 (ENSPCTG00005006914) #20	PPP1R32 (ENSPCTG00005006983) #21	LRRC10B (ENSPCTG00005007103) #22	SYT7 (ENSPCTG00005007241) #23	FADS2 (ENSPCTG00005008356) #32	FADS1 (ENSPCTG00005008419) #31	ENSPCTG00005008459	FEN1 (ENSPCTG00005008477) #29	TMEM258 (ENSPCTG00005008491) #28	MYRF (ENSPCTG00005008529) #26	ENSPCTG00005008871 #36	RAB3IL1 (ENSPCTG00005008916) #35	ENSPCTG00005009299	INCENP (ENSPCTG00005009388)	ENSPCTG00005009578	ENSPCTG00005009626	SLC3A2 (ENSPCTG00005009673)	ENSPCTG00005009866
Blue whale	MODERN SPECIES	19	CD6 (ENSBMSG00010007444) #8	CD5 (ENSBMSG00010007513) #10	VPS37C (ENSBMSG00010007601) #11	ENSBMSG00010007613	ENSBMSG00010007627	ENSBMSG00010007648 #12	VWCE (ENSBMSG00010007667) #13	DDB1 (ENSBMSG00010007697) #14	TKFC (ENSBMSG00010007745) #15	CYB561A3 (ENSBMSG00010007763) #16	TMEM138 (ENSBMSG00010007779) #17	TMEM216 (ENSBMSG00010007791) #18	CPSF7 (ENSBMSG00010007817) #19	SDHAF2 (ENSBMSG00010007854) #20	PPP1R32 (ENSBMSG00010007880) #21	LRRC10B (ENSBMSG00010007904) #22	SYT7 (ENSBMSG00010007963) #23	DAGLA (ENSBMSG00010008009) #25	MYRF (ENSBMSG00010008041) #26	ENSBMSG00010008083 #28	FEN1 (ENSBMSG00010007261) #29	ENSBMSG00010007270	FADS1 (ENSBMSG00010007282) #31	FADS2 (ENSBMSG00010007330) #32	ENSBMSG00010007377 #34	RAB3IL1 (ENSBMSG00010007458) #35	BEST1 (ENSBMSG00010007587) #36	ENSBMSG00010007637 ##37	ENSBMSG00010007674	INCENP (ENSBMSG00010007722)	ENSBMSG00010007851
Camelidae	ANCESTRAL SPECIES	55	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802	ENSGT00950000183045.A.a.a
Arabian camel	MODERN SPECIES	1	SLC15A3 (ENSCDRG00005011095) #7	CD6 (ENSCDRG00005010861) #8	CD5 (ENSCDRG00005010745) #10	VPS37C (ENSCDRG00005010715) #11	ENSCDRG00005009895	ENSCDRG00005009757 #12	VWCE (ENSCDRG00005009470) #13	DDB1 (ENSCDRG00005009299) #14	TKFC (ENSCDRG00005009206) #15	CYB561A3 (ENSCDRG00005009063) #16	TMEM138 (ENSCDRG00005008983) #17	TMEM216 (ENSCDRG00005008866) #18	CPSF7 (ENSCDRG00005008728) #19	SDHAF2 (ENSCDRG00005008552) #20	PPP1R32 (ENSCDRG00005008448) #21	LRRC10B (ENSCDRG00005008413) #22	SYT7 (ENSCDRG00005008063) #23	DAGLA (ENSCDRG00005007887) #25	MYRF (ENSCDRG00005007517) #26	ENSCDRG00005007463 #28	FEN1 (ENSCDRG00005007453) #29	ENSCDRG00005007415	FADS1 (ENSCDRG00005007329) #31	FADS2 (ENSCDRG00005007121) #32	RAB3IL1 (ENSCDRG00005006782) #35	BEST1 (ENSCDRG00005006707) #36	ENSCDRG00005006575 ##37	INCENP (ENSCDRG00005006531)	ENSCDRG00005006491	ENSCDRG00005006462	ENSCDRG00005006418
Suina	ANCESTRAL SPECIES	14	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747.d.a.b.a	ENSGT00940000153747.d.a.a.a	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.a.c.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802	ENSGT00950000183045.A.a.a
Chacoan peccary	MODERN SPECIES	919	ENSCWAG00000021846	ENSCWAG00000021842	ENSCWAG00000021840	ENSCWAG00000021838	ENSCWAG00000021833	ENSCWAG00000021825 #12	VWCE (ENSCWAG00000021797) #13	DDB1 (ENSCWAG00000021785) #14	TKFC (ENSCWAG00000021771) #15	CYB561A3 (ENSCWAG00000021759) #16	TMEM138 (ENSCWAG00000021754) #17	TMEM216 (ENSCWAG00000021749) #18	CPSF7 (ENSCWAG00000021742) #19	SDHAF2 (ENSCWAG00000021735) #20	PPP1R32 (ENSCWAG00000021723) #21	LRRC10B (ENSCWAG00000021722) #22	SYT7 (ENSCWAG00000021581) #23	DAGLA (ENSCWAG00000021546) #25
Pig	MODERN SPECIES	10	ENSSSCG00000048235	ENSSSCG00000026060	ENSSSCG00000013090	ENSSSCG00000058512	ENSSSCG00000052816	PGA5 (ENSSSCG00000013092) #12	VWCE (ENSSSCG00000013093) #13	DDB1 (ENSSSCG00000013094) #14	TKFC (ENSSSCG00000013087) #15	CYB561A3 (ENSSSCG00000013086) #16	TMEM138 (ENSSSCG00000037843) #17	TMEM216 (ENSSSCG00000013084) #18	CPSF7 (ENSSSCG00000013083) #19	SDHAF2 (ENSSSCG00000013082) #20	ENSSSCG00000050990	LRRC10B (ENSSSCG00000013088) #22	SYT7 (ENSSSCG00000021906) #23	DAGLA (ENSSSCG00000013079) #25	ENSSSCG00000013078 #26	TMEM258 (ENSSSCG00000027538) #28	FEN1 (ENSSSCG00000063433) #29	FADS1 (ENSSSCG00000024015) #31	FADS2 (ENSSSCG00000013072) #32	FADS3 (ENSSSCG00000013073) #34	RAB3IL1 (ENSSSCG00000013074) #35	BEST1 (ENSSSCG00000023090) #36	ENSSSCG00000014540 ##37	INCENP (ENSSSCG00000013066)	SCGB1D1 (ENSSSCG00000013068)	PHEROC (ENSSSCG00000013067)	ASRGL1 (ENSSSCG00000013065)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Laurasiatheria_c	ANCESTRAL SPECIES	20	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Chiroptera	ANCESTRAL SPECIES	14	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.l	ENSGT00530000063866	ENSGT00730000111073.k
Microchiroptera	ANCESTRAL SPECIES	13	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.l	ENSGT00390000013802	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Greater horseshoe bat	MODERN SPECIES	2	SLC15A3 (ENSRFEG00010002033) #7	CD6 (ENSRFEG00010001990) #8	CD5 (ENSRFEG00010001945) #10	VPS37C (ENSRFEG00010001914) #11	ENSRFEG00010001900	PGA (ENSRFEG00010001876) #12	VWCE (ENSRFEG00010001793) #13	DDB1 (ENSRFEG00010001692) #14	TKFC (ENSRFEG00010001572) #15	CYB561A3 (ENSRFEG00010001532) #16	TMEM138 (ENSRFEG00010001493) #17	TMEM216 (ENSRFEG00010001454) #18	CPSF7 (ENSRFEG00010001384) #19	SDHAF2 (ENSRFEG00010001337) #20	PPP1R32 (ENSRFEG00010001269) #21	LRRC10B (ENSRFEG00010001228) #22	SYT7 (ENSRFEG00010001087) #23	DAGLA (ENSRFEG00010000953) #25	MYRF (ENSRFEG00010000719) #26	ENSRFEG00010000644 #28	FEN1 (ENSRFEG00010000639) #29	ENSRFEG00010000627	FADS2 (ENSRFEG00010000561) #32	FADS1 (ENSRFEG00010015439) #31	RAB3IL1 (ENSRFEG00010015301) #35	ENSRFEG00010015154 ##37	INCENP (ENSRFEG00010015121)	ENSRFEG00010015100	ENSRFEG00010014944	ENSRFEG00010014886	ASRGL1 (ENSRFEG00010014743)
Equus	ANCESTRAL SPECIES	11	ENSGT00940000155036.r.a.a.b #12	ENSGT00940000155036.r.a.a.a.a.b #12	ENSGT00940000155036.r.a.a.a.a.a #12	ENSGT00940000155036.r.b.b #12	ENSGT00940000155036.r.b.a.b #12	ENSGT00940000155036.r.b.a.a #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.a.c.a.b.b ##37	ENSGT00950000182841.b.a.a.a.c.a.b.a.b ##37	ENSGT00730000111073	ENSGT00530000063866.k.b.a
Donkey	MODERN SPECIES	8	ENSEASG00005028744 #12	ENSEASG00005024988 #12	ENSEASG00005032330 #12	ENSEASG00005029339 #12	ENSEASG00005008140 #12	ENSEASG00005031016 #12	VWCE (ENSEASG00005008162) #13	DDB1 (ENSEASG00005008184) #14	TKFC (ENSEASG00005008188) #15	CYB561A3 (ENSEASG00005008190) #16	TMEM138 (ENSEASG00005008192) #17	TMEM216 (ENSEASG00005032944) #18	CPSF7 (ENSEASG00005008196) #19	ENSEASG00005030853 #20	PPP1R32 (ENSEASG00005008201) #21	LRRC10B (ENSEASG00005028609) #22	SYT7 (ENSEASG00005008206) #23	DAGLA (ENSEASG00005008208) #25	MYRF (ENSEASG00005008220) #26	ENSEASG00005008224 #28	FEN1 (ENSEASG00005030604) #29	ENSEASG00005008225	FADS1 (ENSEASG00005008226) #31	FADS2 (ENSEASG00005008287) #32	FADS3 (ENSEASG00005009066) #34	RAB3IL1 (ENSEASG00005009075) #35	BEST1 (ENSEASG00005009078) #36	ENSEASG00005036587 ##37	INCENP (ENSEASG00005009084)	ENSEASG00005036713	ENSEASG00005009091
Horse	MODERN SPECIES	3	ENSECAG00000038287 #12	ENSECAG00000040239 #12	ENSECAG00000048988 #12	ENSECAG00000031192 #12	ENSECAG00000050402 #12	ENSECAG00000052923	ENSECAG00000035902 #12	VWCE (ENSECAG00000010750) #13	DDB1 (ENSECAG00000012136) #14	TKFC (ENSECAG00000015944) #15	TMEM138 (ENSECAG00000018278) #17	TMEM216 (ENSECAG00000018294) #18	CPSF7 (ENSECAG00000018521) #19	SDHAF2 (ENSECAG00000019760) #20	PPP1R32 (ENSECAG00000019863) #21	LRRC10B (ENSECAG00000026998) #22	SYT7 (ENSECAG00000020657) #23	DAGLA (ENSECAG00000020795) #25	MYRF (ENSECAG00000021799) #26	FEN1 (ENSECAG00000005344) #29	ENSECAG00000056039	FADS1 (ENSECAG00000023280) #31	FADS2 (ENSECAG00000024650) #32	FADS3 (ENSECAG00000024915) #34	RAB3IL1 (ENSECAG00000006755) #35	BEST1 (ENSECAG00000007692) #36	FTH1 (ENSECAG00000008683) ##37	INCENP (ENSECAG00000009621)	ENSECAG00000010276	ENSECAG00000028239	ENSECAG00000043238
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Caniformia	ANCESTRAL SPECIES	21	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587.c.b #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866.j.a	ENSGT00530000063866.j.b
Caniformia_b	ANCESTRAL SPECIES	19	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587.c.b #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.d ##37	ENSGT00730000111073	ENSGT00530000063866.j.a	ENSGT00390000013802.l
Ursidae	ANCESTRAL SPECIES	2	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587.c.b #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.d ##37	ENSGT00730000111073	ENSGT00390000013802.l	ENSGT00530000063866.j.b
Giant Panda	MODERN SPECIES	7	SLC15A3 (ENSAMEG00000007463) #7	CD6 (ENSAMEG00000007493) #8	ENSAMEG00000007547 #10	VPS37C (ENSAMEG00000007566) #11	ENSAMEG00000007574	ENSAMEG00000007610 #12	VWCE (ENSAMEG00000025131) #13	DDB1 (ENSAMEG00000016518) #14	TKFC (ENSAMEG00000016560) #15	CYB561A3 (ENSAMEG00000016579) #16	TMEM138 (ENSAMEG00000016585) #17	TMEM216 (ENSAMEG00000016592) #18	CPSF7 (ENSAMEG00000016595) #19	SDHAF2 (ENSAMEG00000016609) #20	PPP1R32 (ENSAMEG00000016613) #21	LRRC10B (ENSAMEG00000016619) #22	SYT7 (ENSAMEG00000016620) #23	DAGLA (ENSAMEG00000016637) #25	MYRF (ENSAMEG00000016669) #26	ENSAMEG00000016694 #28	ENSAMEG00000027333	FADS1 (ENSAMEG00000016696) #31	ENSAMEG00000016725 #32	FADS3 (ENSAMEG00000016772) #34	RAB3IL1 (ENSAMEG00000016803) #35	BEST1 (ENSAMEG00000016808) #36	ENSAMEG00000016831 ##37	INCENP (ENSAMEG00000016838)	ENSAMEG00000030118	ENSAMEG00000025507	ASRGL1 (ENSAMEG00000006791)
Ursus	ANCESTRAL SPECIES	63	ENSGT00950000185314	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587.c.b #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.d ##37	ENSGT00730000111073	ENSGT00950000182841.b.a.a.b.b.c.a ##37	ENSGT00390000013802.l
American black bear	MODERN SPECIES	338	ENSUAMG00000017709	CD6 (ENSUAMG00000017710) #8	CD5 (ENSUAMG00000017778) #10	VPS37C (ENSUAMG00000017782) #11	ENSUAMG00000017784	ENSUAMG00000017787 #12	VWCE (ENSUAMG00000017790) #13	DDB1 (ENSUAMG00000017793) #14	TKFC (ENSUAMG00000017799) #15	CYB561A3 (ENSUAMG00000017801) #16	ENSUAMG00000017803 #17	TMEM216 (ENSUAMG00000017806) #18	CPSF7 (ENSUAMG00000017809) #19	SDHAF2 (ENSUAMG00000017813) #20	PPP1R32 (ENSUAMG00000017815) #21	LRRC10B (ENSUAMG00000017816) #22	SYT7 (ENSUAMG00000017819) #23
Mustelinae	ANCESTRAL SPECIES	3	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587.c.b #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b.d ##37	ENSGT00730000111073	ENSGT00530000063866.j.a	ENSGT00390000013802.l	ENSGT00530000063866.j.b
Ferret	MODERN SPECIES	314	SLC15A3 (ENSMPUG00000014389) #7	CD6 (ENSMPUG00000014383) #8	CD5 (ENSMPUG00000014379) #10	VPS37C (ENSMPUG00000014366) #11	ENSMPUG00000014331	ENSMPUG00000014296 #12	VWCE (ENSMPUG00000014287) #13	DDB1 (ENSMPUG00000014200) #14	TKFC (ENSMPUG00000014193) #15	CYB561A3 (ENSMPUG00000014186) #16	TMEM138 (ENSMPUG00000014175) #17	TMEM216 (ENSMPUG00000014169) #18	CPSF7 (ENSMPUG00000014163) #19	SDHAF2 (ENSMPUG00000014160) #20	PPP1R32 (ENSMPUG00000014156) #21	LRRC10B (ENSMPUG00000019998) #22	SYT7 (ENSMPUG00000014150) #23	DAGLA (ENSMPUG00000014142) #25	MYRF (ENSMPUG00000014126) #26	FEN1 (ENSMPUG00000019996) #29	FADS1 (ENSMPUG00000014112) #31	FADS2 (ENSMPUG00000014108) #32	FADS3 (ENSMPUG00000014102) #34	RAB3IL1 (ENSMPUG00000014075) #35	BEST1 (ENSMPUG00000014068) #36	ENSMPUG00000014030 ##37	ENSMPUG00000014017	INCENP (ENSMPUG00000014015)	ENSMPUG00000014011	ENSMPUG00000014008	ENSMPUG00000014005
American mink	MODERN SPECIES	215	SLC15A3 (ENSNVIG00000022044) #7	CD6 (ENSNVIG00000021998) #8	CD5 (ENSNVIG00000021949) #10	VPS37C (ENSNVIG00000021937) #11	ENSNVIG00000021860	ENSNVIG00000021821 #12	VWCE (ENSNVIG00000021787) #13	DDB1 (ENSNVIG00000021765) #14	TKFC (ENSNVIG00000021722) #15	CYAC3 (ENSNVIG00000021701) #16	TMEM138 (ENSNVIG00000021692) #17	TMEM216 (ENSNVIG00000021679) #18	CPSF7 (ENSNVIG00000021658) #19	SDHAF2 (ENSNVIG00000021634) #20	PPP1R32 (ENSNVIG00000021597) #21	LRRC10B (ENSNVIG00000021593) #22	SYT7 (ENSNVIG00000021572) #23	DAGLA (ENSNVIG00000021552) #25	MYRF (ENSNVIG00000021484) #26	TMEM258 (ENSNVIG00000021475) #28	FEN1 (ENSNVIG00000021470) #29	ENSNVIG00000021464	FADS2 (ENSNVIG00000021440) #32	FADS3 (ENSNVIG00000021398) #34	R3GEF (ENSNVIG00000021368) #35	BEST1 (ENSNVIG00000021351) #36	ENSNVIG00000021327 ##37	INCENP (ENSNVIG00000021280)	ENSNVIG00000021274	ENSNVIG00000021260	ENSNVIG00000021252
Canidae	ANCESTRAL SPECIES	13	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587.c.b #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00520000061410	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866.j.a	ENSGT00390000013802
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00940000161414	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587.c.b #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00520000061410	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866.j.a	ENSGT00390000013802.m
Dingo	MODERN SPECIES	36	TMEM132A (ENSCAFG00020012571)	CD6 (ENSCAFG00020012579) #8	CD5 (ENSCAFG00020012684) #10	VPS37C (ENSCAFG00020012691) #11	ENSCAFG00020012695	ENSCAFG00020012700 #12	ENSCAFG00020012718 #13	DDB1 (ENSCAFG00020012722) #14	TKFC (ENSCAFG00020012731) #15	CYB561A3 (ENSCAFG00020012743) #16	TMEM138 (ENSCAFG00020012745) #17	TMEM216 (ENSCAFG00020012747) #18	CPSF7 (ENSCAFG00020012753) #19	SDHAF2 (ENSCAFG00020012759) #20	PPP1R32 (ENSCAFG00020012763) #21	LRRC10B (ENSCAFG00020012772) #22	SYT7 (ENSCAFG00020012774) #23	DAGLA (ENSCAFG00020012782) #25	ENSCAFG00020012846 #26	ENSCAFG00020012853 #28	ENSCAFG00020012857	FADS1 (ENSCAFG00020012860) #31	FADS2 (ENSCAFG00020012907) #32	FADS3 (ENSCAFG00020012916) #34	RAB3IL1 (ENSCAFG00020012943) #35	BEST1 (ENSCAFG00020012953) #36	ENSCAFG00020012965 ##37	INCENP (ENSCAFG00020012970)	ENSCAFG00020012987	ENSCAFG00020012994	ENSCAFG00020012996
Red fox	MODERN SPECIES	249	CD6 (ENSVVUG00000005070) #8	CD5 (ENSVVUG00000005055) #10	VPS37C (ENSVVUG00000005046) #11	ENSVVUG00000005041	ENSVVUG00000005020 #12	VWCE (ENSVVUG00000005012) #13	DDB1 (ENSVVUG00000004987) #14	TKFC (ENSVVUG00000004965) #15	CYB561A3 (ENSVVUG00000004953) #16	ENSVVUG00000004952 #17	TMEM216 (ENSVVUG00000004944) #18	CPSF7 (ENSVVUG00000004939) #19	ENSVVUG00000004934	SDHAF2 (ENSVVUG00000004927) #20	PPP1R32 (ENSVVUG00000004912) #21	LRRC10B (ENSVVUG00000004899) #22	SYT7 (ENSVVUG00000004869) #23	DAGLA (ENSVVUG00000004253) #25	MYRF (ENSVVUG00000004193) #26	ENSVVUG00000004180 #28	MYRF (ENSVVUG00000004176) #29	FADS1 (ENSVVUG00000004096) #31	ENSVVUG00000004085	FADS2 (ENSVVUG00000004078) #32	FADS3 (ENSVVUG00000003847) #34	RAB3IL1 (ENSVVUG00000003803) #35	BEST1 (ENSVVUG00000003792) #36	FTH1 (ENSVVUG00000003781) ##37	INCENP (ENSVVUG00000003752)	ENSVVUG00000003746
Felidae	ANCESTRAL SPECIES		ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Panthera	ANCESTRAL SPECIES	18	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650.a.a #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00390000013802
Panthera_a	ANCESTRAL SPECIES	18	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.f #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650.b #36	ENSGT00940000158650.a.a #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073	ENSGT00530000063866
leopard	MODERN SPECIES	64	SLC15A3 (ENSPPRG00000000982) #7	CD6 (ENSPPRG00000000694) #8	CD5 (ENSPPRG00000023376) #10	VPS37C (ENSPPRG00000024327) #11	ENSPPRG00000024452	ENSPPRG00000020150 #12	VWCE (ENSPPRG00000014468) #13	DDB1 (ENSPPRG00000013300) #14	TKFC (ENSPPRG00000012836) #15	CYB561A3 (ENSPPRG00000012268) #16	TMEM138 (ENSPPRG00000010265) #17	TMEM216 (ENSPPRG00000009045) #18	CPSF7 (ENSPPRG00000008538) #19	SDHAF2 (ENSPPRG00000006932) #20	PPP1R32 (ENSPPRG00000005500) #21	LRRC10B (ENSPPRG00000017051) #22	SYT7 (ENSPPRG00000001764) #23	DAGLA (ENSPPRG00000023515) #25	MYRF (ENSPPRG00000024144) #26	ENSPPRG00000013362 #28	FEN1 (ENSPPRG00000016819) #29	ENSPPRG00000012890	FADS1 (ENSPPRG00000012671) #31	FADS2 (ENSPPRG00000011694) #32	FADS3 (ENSPPRG00000009918) #34	RAB3IL1 (ENSPPRG00000008696) #35	ENSPPRG00000007627 #36	ENSPPRG00000007445 #36	ENSPPRG00000006764 ##37	INCENP (ENSPPRG00000006209)	ENSPPRG00000002262
lion	MODERN SPECIES	10	SLC15A3 (ENSPLOG00000006141) #7	CD6 (ENSPLOG00000006171) #8	CD5 (ENSPLOG00000006224) #10	VPS37C (ENSPLOG00000006252) #11	ENSPLOG00000006271	ENSPLOG00000006304 #12	VWCE (ENSPLOG00000006344) #13	DDB1 (ENSPLOG00000006422) #14	TKFC (ENSPLOG00000006453) #15	CYB561A3 (ENSPLOG00000006506) #16	TMEM138 (ENSPLOG00000006522) #17	TMEM216 (ENSPLOG00000006540) #18	CPSF7 (ENSPLOG00000006589) #19	SDHAF2 (ENSPLOG00000006635) #20	PPP1R32 (ENSPLOG00000006694) #21	LRRC10B (ENSPLOG00000006771) #22	SYT7 (ENSPLOG00000006911) #23	DAGLA (ENSPLOG00000007192) #25	MYRF (ENSPLOG00000007251) #26	ENSPLOG00000007399 #28	FEN1 (ENSPLOG00000007415) #29	ENSPLOG00000007425	FADS1 (ENSPLOG00000007444) #31	FADS2 (ENSPLOG00000007565) #32	FADS3 (ENSPLOG00000007672) #34	RAB3IL1 (ENSPLOG00000007741) #35	BEST1 (ENSPLOG00000007969) #36	ENSPLOG00000008095 ##37	INCENP (ENSPLOG00000008155)	ENSPLOG00000008201	ENSPLOG00000008289
Cat	MODERN SPECIES	241	SLC15A3 (ENSFCAG00000013670) #7	CD6 (ENSFCAG00000013671) #8	CD5 (ENSFCAG00000013672) #10	VPS37C (ENSFCAG00000041916) #11	ENSFCAG00000030014	ENSFCAG00000013673 #12	VWCE (ENSFCAG00000029857) #13	DDB1 (ENSFCAG00000029716) #14	TKFC (ENSFCAG00000026519) #15	CYB561A3 (ENSFCAG00000013674) #16	TMEM138 (ENSFCAG00000027625) #17	TMEM216 (ENSFCAG00000012248) #18	CPSF7 (ENSFCAG00000013677) #19	SDHAF2 (ENSFCAG00000013678) #20	PPP1R32 (ENSFCAG00000013679) #21	LRRC10B (ENSFCAG00000045510) #22	SYT7 (ENSFCAG00000013680) #23	DAGLA (ENSFCAG00000013681) #25	MYRF (ENSFCAG00000013683) #26	TMEM258 (ENSFCAG00000013684) #28	FEN1 (ENSFCAG00000013685) #29	ENSFCAG00000035555	FADS1 (ENSFCAG00000013686) #31	FADS2 (ENSFCAG00000024030) #32	FADS3 (ENSFCAG00000027535) #34	RAB3IL1 (ENSFCAG00000007376) #35	BEST1 (ENSFCAG00000050693) #36	FTH1 (ENSFCAG00000007382) ##37	INCENP (ENSFCAG00000002264)	ENSFCAG00000034757	ENSFCAG00000024754
Atlantogenata	ANCESTRAL SPECIES	17	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37	ENSGT00730000111073	ENSGT00390000013802	ENSGT00530000063866	ENSGT00950000183045.A.a.a
Xenarthra	ANCESTRAL SPECIES	495								ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23
Armadillo	MODERN SPECIES	2630								DDB1 (ENSDNOG00000014884) #14	TKFC (ENSDNOG00000014918) #15	CYB561A3 (ENSDNOG00000048434) #16	TMEM138 (ENSDNOG00000034054) #17	TMEM216 (ENSDNOG00000034511) #18	CPSF7 (ENSDNOG00000018517) #19	ENSDNOG00000046687 #20	PPP1R32 (ENSDNOG00000045881) #21	LRRC10B (ENSDNOG00000019407) #22	SYT7 (ENSDNOG00000038269) #23
Afrotheria	ANCESTRAL SPECIES	9	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b	ENSGT00940000154902.bb.a
Afrotheria_a	ANCESTRAL SPECIES	9	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000153747	ENSGT00940000155036 #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a.a.a ##37	ENSGT00730000111073	ENSGT00530000063866	ENSGT00950000183045.A.a.a	ENSGT00940000155073.b
Hyrax	MODERN SPECIES	8550																LRRC10B (ENSPCAG00000013451) #22	SYT7 (ENSPCAG00000013391) #23
Marsupialia	ANCESTRAL SPECIES	12	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.b.a ##37	ENSGT00950000182841.b.a.a.b.a.a.b.b.a.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000154902.bb.b
Marsupialia_b	ANCESTRAL SPECIES	15	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000154902.bb.b	ENSGT00940000154902.bb.a
Diprotodontia	ANCESTRAL SPECIES	26	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000154902.bb.b	ENSGT00940000154902.bb.a
Diprotodontia_a	ANCESTRAL SPECIES	15	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00390000017536 #10	ENSGT00950000183012.A.b #11	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.b #31	ENSGT00950000182990.a.a.a.b.u.a #32	ENSGT00950000182990.a.a.a.b.u.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.a.b.a ##37	ENSGT00730000111073	ENSGT00950000183045.A.a.a	ENSGT00940000154902.bb.b	ENSGT00940000154902.bb.a
Common wonbat	MODERN SPECIES	901	TMEM109 (ENSVURG00010003500)	TMEM132A (ENSVURG00010003472)	SLC15A3 (ENSVURG00010003467) #7	ENSVURG00010003415 #8	ENSVURG00010003385 #10	VPS37C (ENSVURG00010003376) #11	VWCE (ENSVURG00010003339) #13	DDB1 (ENSVURG00010003281) #14	TKFC (ENSVURG00010003242) #15	CYB561A3 (ENSVURG00010003227) #16	TMEM138 (ENSVURG00010003209) #17	TMEM216 (ENSVURG00010003196) #18	CPSF7 (ENSVURG00010003178) #19	SDHAF2 (ENSVURG00010003160) #20	PPP1R32 (ENSVURG00010003144) #21	LRRC10B (ENSVURG00010003134) #22	SYT7 (ENSVURG00010003104) #23	DAGLA (ENSVURG00010003069) #25	MYRF (ENSVURG00010003029) #26	TMEM258 (ENSVURG00010003004) #28	FEN1 (ENSVURG00010002995) #29	FADS1 (ENSVURG00010002983) #31	FADS2 (ENSVURG00010002917) #32	FADS3 (ENSVURG00010002868) #34	RAB3IL1 (ENSVURG00010002828) #35	ENSVURG00010002810 #36	ENSVURG00010002790 ##37	INCENP (ENSVURG00010002477)	ASRGL1 (ENSVURG00010002440)	ENSVURG00010002376	ENSVURG00010002356
koala	MODERN SPECIES	179							VWCE (ENSPCIG00000002691) #13	DDB1 (ENSPCIG00000002643) #14	TKFC (ENSPCIG00000002619) #15	CYB561A3 (ENSPCIG00000002594) #16	TMEM138 (ENSPCIG00000002572) #17	ENSPCIG00000002563 #18	CPSF7 (ENSPCIG00000002551) #19	SDHAF2 (ENSPCIG00000002531) #20	PPP1R32 (ENSPCIG00000013351) #21	LRRC10B (ENSPCIG00000013347) #22	SYT7 (ENSPCIG00000013322) #23	DAGLA (ENSPCIG00000020645) #25	MYRF (ENSPCIG00000010426) #26	TMEM258 (ENSPCIG00000010423) #28	FEN1 (ENSPCIG00000010422) #29	FADS1 (ENSPCIG00000009947) #31	FADS2 (ENSPCIG00000017850) #32	FADS3 (ENSPCIG00000017847) #34	RAB3IL1 (ENSPCIG00000036371) #35	ENSPCIG00000033063 #36	ENSPCIG00000035145 ##37	INCENP (ENSPCIG00000017818)	ASRGL1 (ENSPCIG00000017813)	ENSPCIG00000003378	ENSPCIG00000003373
Wallaby	MODERN SPECIES	10517																LRRC10B (ENSMEUG00000013329) #22
Opossum	MODERN SPECIES	4	PRPF19 (ENSMODG00000020338)	TMEM109 (ENSMODG00000020339)	ENSMODG00000020341 #8	ENSMODG00000029458 #10	VPS37C (ENSMODG00000020343) #11	VWCE (ENSMODG00000020350) #13	DDB1 (ENSMODG00000020353) #14	TKFC (ENSMODG00000020356) #15	CYB561A3 (ENSMODG00000020358) #16	TMEM138 (ENSMODG00000020360) #17	ENSMODG00000020362 #18	CPSF7 (ENSMODG00000020364) #19	ENSMODG00000020366 #20	ENSMODG00000020368 #21	ENSMODG00000049526	LRRC10B (ENSMODG00000020369) #22	ENSMODG00000007494 #32	FADS3 (ENSMODG00000007513) #34	ENSMODG00000007582 ##37	INCENP (ENSMODG00000007601)	ENSMODG00000045936	ASRGL1 (ENSMODG00000007616)	ENSMODG00000007627	ENSMODG00000043184	ENSMODG00000007691	TUT1 (ENSMODG00000007710)	EML3 (ENSMODG00000007770)	ENSMODG00000007785	B3GAT3 (ENSMODG00000007801)	GANAB (ENSMODG00000007869)	INTS5 (ENSMODG00000007879)
Platypus	MODERN SPECIES	14	PRPF19 (ENSOANG00000009681)	TMEM109 (ENSOANG00000009683)	TMEM132A (ENSOANG00000049970)	SLC15A3 (ENSOANG00000037038) #7	ENSOANG00000003839 #8	ENSOANG00000008009 #10	VPS37C (ENSOANG00000014602) #11	VWCE (ENSOANG00000021542) #13	DDB1 (ENSOANG00000004897) #14	TKFC (ENSOANG00000010938) #15	CYB561A3 (ENSOANG00000050431) #16	TMEM138 (ENSOANG00000046660) #18	CPSF7 (ENSOANG00000010882) #19	SDHAF2 (ENSOANG00000042499) #20	PPP1R32 (ENSOANG00000010806) #21	LRRC10B (ENSOANG00000001737) #22	SYT7 (ENSOANG00000039173) #23	DAGLA (ENSOANG00000022487) #25	MYRF (ENSOANG00000003410) #26	TMEM258 (ENSOANG00000022139) #28	FEN1 (ENSOANG00000041443) #29	FADS1 (ENSOANG00000046623) #31	FADS2 (ENSOANG00000037735) #32	FADS3 (ENSOANG00000004111) #34	RAB3IL1 (ENSOANG00000005198) #35	ENSOANG00000037099 #36	ENSOANG00000012401 ##37	ENSOANG00000032225	ASRGL1 (ENSOANG00000014197)	ENSOANG00000022312	ENSOANG00000051157
Sauria	ANCESTRAL SPECIES	3	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036 #12	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b.b.a.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37
Lepidosauria	ANCESTRAL SPECIES	10	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036 #12	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00940000161709	ENSGT00950000183157.b	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.a.b.b.a.b.b ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j	ENSGT00730000111073.i	ENSGT00940000160873.b.a.a
tuatara	MODERN SPECIES	1929	ENSSPUG00000019332 #8	ENSSPUG00000019333	ENSSPUG00000019334	VPS37C (ENSSPUG00000019335) #11	ENSSPUG00000019336 #12	VWCE (ENSSPUG00000019337) #13	DDB1 (ENSSPUG00000019338) #14	TKFC (ENSSPUG00000019339) #15	CYB561A3 (ENSSPUG00000019340) #16	ENSSPUG00000019341 #17	ENSSPUG00000019342 #17	TMEM216 (ENSSPUG00000019343) #18	CPSF7 (ENSSPUG00000019344) #19	SDHAF2 (ENSSPUG00000019345) #20	PPP1R32 (ENSSPUG00000019346) #21	LRRC10B (ENSSPUG00000019347) #22	SYT7 (ENSSPUG00000019348) #23
Episquamata	ANCESTRAL SPECIES		ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00940000161709	ENSGT00950000183157.b	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00520000061410	ENSGT00950000182990.a.a.b.a.b.b.a.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.f ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000156009.C	ENSGT00940000159102 #35	ENSGT00940000158650 #36
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00950000183157.b	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.a.b.b.a.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.f ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j
Elapidae	ANCESTRAL SPECIES	3	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089.d #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00950000183157.b	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089.a.b #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.a.b.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.a.b.b.e.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j	ENSGT00730000111073.i	ENSGT00940000156191
Indian cobra	MODERN SPECIES		ENSNNAG00000002362	ENSNNAG00000002381	ENSNNAG00000002423 #13	ENSNNAG00000002446 #12	ENSNNAG00000002458 #12	ENSNNAG00000000291	DDB1 (ENSNNAG00000000380) #14	TKFC (ENSNNAG00000000422) #15	CYB561A3 (ENSNNAG00000000440) #16	TMEM138 (ENSNNAG00000000451) #17	TMEM216 (ENSNNAG00000000466) #18	ENSNNAG00000000478	CPSF7 (ENSNNAG00000000495) #19	SDHAF2 (ENSNNAG00000000510) #20	PPP1R32 (ENSNNAG00000000524) #21	LRRC10B (ENSNNAG00000000538) #22	SYT7 (ENSNNAG00000000547) #23	DAGLA (ENSNNAG00000000559) #25	MYRF (ENSNNAG00000000604) #26	ENSNNAG00000000653 #28	FEN1 (ENSNNAG00000000661) #29	ENSNNAG00000000670 ##34	ENSNNAG00000000682 ##34	ENSNNAG00000000735 ##34	ENSNNAG00000000918 ##34	ENSNNAG00000000925 ##34	ENSNNAG00000000939 ##34	ENSNNAG00000000964 ##34	ENSNNAG00000001017 ##34	ENSNNAG00000001046 ##34	ENSNNAG00000001071 ##34
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036 #12	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j	ENSGT00730000111073.i	ENSGT00940000160873.b.a.a
Cryptodira	ANCESTRAL SPECIES	47	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036.y.b.b #12	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT01030000235106	ENSGT00390000001149 #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j	ENSGT00730000111073.i	ENSGT00940000160873.b.a.a
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036.y.b.b #12	ENSGT00940000155036.y.a #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT01030000235106	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j	ENSGT00730000111073.i	ENSGT00940000160873.b.a.a.b
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00940000155036.y.b.b #12	ENSGT00940000155036.y.b.a.a.a #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00940000161709	ENSGT00950000183157.b	ENSGT00940000156878.h	ENSGT01030000235106	ENSGT00390000001149.c #20	ENSGT00390000003127 #21	ENSGT00940000170324	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j	ENSGT00730000111073.i	ENSGT00940000160873.b.a.a.b
Goode s thornscrub tortoise	MODERN SPECIES	18	ENSGEVG00005007082 #12	ENSGEVG00005006798 #12	ENSGEVG00005006587 #12	ENSGEVG00005006523	VWCE (ENSGEVG00005006499) #13	DDB1 (ENSGEVG00005006454) #14	TKFC (ENSGEVG00005006420) #15	CYB561A3 (ENSGEVG00005006395) #16	TMEM138 (ENSGEVG00005006358) #17	TMEM216 (ENSGEVG00005006332) #18	ENSGEVG00005006302	ENSGEVG00005006287	ENSGEVG00005006101 #20	PPP1R32 (ENSGEVG00005006026) #21	ENSGEVG00005006003	LRRC10B (ENSGEVG00005005977) #22	SYT7 (ENSGEVG00005005950) #23	DAGLA (ENSGEVG00005005875) #25	MYRF (ENSGEVG00005005739) #26	TMEM258 (ENSGEVG00005005705) #28	FEN1 (ENSGEVG00005017091) #29	ENSGEVG00005016961 ##34	ENSGEVG00005016926 ##34	ENSGEVG00005016902 ##34	ENSGEVG00005016857 ##34	ENSGEVG00005016773 #34	RAB3IL1 (ENSGEVG00005016738) #35	BEST1 (ENSGEVG00005016682) #36	ENSGEVG00005016670 ##37	ENSGEVG00005016497	ENSGEVG00005016463
Abingdon island giant tortoise	MODERN SPECIES	471					ENSCABG00000009229	ENSCABG00000009227	DDB1 (ENSCABG00000009221) #14	TKFC (ENSCABG00000009218) #15	CYB561A3 (ENSCABG00000009215) #16	TMEM138 (ENSCABG00000009213) #17	TMEM216 (ENSCABG00000009212) #18	ENSCABG00000009210	ENSCABG00000009208	ENSCABG00000009067 #20	ENSCABG00000009064	LRRC10B (ENSCABG00000009061) #22	SYT7 (ENSCABG00000009058) #23
Emydidae	ANCESTRAL SPECIES	54	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036.y.b.b #12	ENSGT00940000155036.y.a #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT01030000235106	ENSGT00390000001149.f #20	ENSGT00940000170324	ENSGT00390000003127 #21	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00950000182990.a.a.b.a.b.a ##34	ENSGT00950000182990.a.a.b.a.b.b.b.a ##34	ENSGT00950000182990.a.a.b.a.a ##34	ENSGT00950000182990.a.a.a.b #34	ENSGT00940000159102 #35	ENSGT00940000158650 #36	ENSGT00950000182841.b.a.a.b.b ##37	ENSGT00730000111073.j	ENSGT00730000111073.i	ENSGT01000000216530
painted turtle	MODERN SPECIES	884	ENSCPBG00000017839	ENSCPBG00000017833	ENSCPBG00000017823 ##34	ENSCPBG00000017816 ##34	ENSCPBG00000017808 #34	ENSCPBG00000017778 #12	ENSCPBG00000017758 #13	DDB1 (ENSCPBG00000017728) #14	TKFC (ENSCPBG00000017715) #15	CYB561A3 (ENSCPBG00000017710) #16	TMEM138 (ENSCPBG00000017704) #17	TMEM216 (ENSCPBG00000017696) #18	ENSCPBG00000017695	ENSCPBG00000017691	PPP1R32 (ENSCPBG00000017682) #21	LRRC10B (ENSCPBG00000017675) #22	SYT7 (ENSCPBG00000017666) #23	DAGLA (ENSCPBG00000017660) #25	MYRF (ENSCPBG00000017637) #26	TMEM258 (ENSCPBG00000017629) #28	FEN1 (ENSCPBG00000017628) #29	ENSCPBG00000017627	ENSCPBG00000017626	ENSCPBG00000017625 ##34
Three-toed box turtle	MODERN SPECIES	34	ENSTMTG00000015326	VPS37C (ENSTMTG00000015311) #11	ENSTMTG00000015299	ENSTMTG00000015250	ENSTMTG00000015155	VWCE (ENSTMTG00000015112) #13	DDB1 (ENSTMTG00000015056) #14	TKFC (ENSTMTG00000015040) #15	CYB561A3 (ENSTMTG00000015023) #16	TMEM138 (ENSTMTG00000015004) #17	TMEM216 (ENSTMTG00000014990) #18	ENSTMTG00000014968	ENSTMTG00000014958	ENSTMTG00000014947 #20	ENSTMTG00000014935	LRRC10B (ENSTMTG00000014926) #22	SYT7 (ENSTMTG00000014896) #23	DAGLA (ENSTMTG00000014867) #25	MYRF (ENSTMTG00000014135) #26	TMEM258 (ENSTMTG00000014059) #28	FEN1 (ENSTMTG00000014054) #29	ENSTMTG00000014042 ##34	ENSTMTG00000014027 ##34	ENSTMTG00000014777 ##34	ENSTMTG00000014758 ##34	ENSTMTG00000014740 #34	RAB3IL1 (ENSTMTG00000014710) #35	BEST1 (ENSTMTG00000014682) #36	ENSTMTG00000014675 ##37	ENSTMTG00000014600	ENSTMTG00000014564
Chinese turtle	MODERN SPECIES	30	ENSPSIG00000010744	VPS37C (ENSPSIG00000010842) #11	ENSPSIG00000010855 #12	ENSPSIG00000011818 #12	VWCE (ENSPSIG00000012721) #13	ENSPSIG00000013209	DDB1 (ENSPSIG00000013275) #14	TKFC (ENSPSIG00000013665) #15	CYB561A3 (ENSPSIG00000014975) #16	TMEM138 (ENSPSIG00000015033) #17	TMEM216 (ENSPSIG00000015038) #18	ENSPSIG00000015043	ENSPSIG00000015087 #19	ENSPSIG00000015092 #19	PPP1R32 (ENSPSIG00000015101) #21	LRRC10B (ENSPSIG00000015220) #22	SYT7 (ENSPSIG00000015233) #23	DAGLA (ENSPSIG00000015323) #25	ENSPSIG00000001141	MYRF (ENSPSIG00000015590) #26	TMEM258 (ENSPSIG00000015869) #28	FEN1 (ENSPSIG00000015973) #29	ENSPSIG00000015988	ENSPSIG00000016022	ENSPSIG00000016045	ENSPSIG00000016066	ENSPSIG00000016070	ENSPSIG00000016173	MRPL16 (ENSPSIG00000016182)	STX3 (ENSPSIG00000016204)	PATL1 (ENSPSIG00000016206)
Archosauria	ANCESTRAL SPECIES	41	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036 #12	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848
Aves	ANCESTRAL SPECIES	42	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000155036.w #12	ENSGT00940000167768	ENSGT00940000155036.x #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848
Neognathae	ANCESTRAL SPECIES	30	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000155036.x #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00960000192722	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848
Galloanserae	ANCESTRAL SPECIES	30	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768.a	ENSGT00940000162710.l	ENSGT00940000155036.x #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00960000192722	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263499.a.b	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.a	ENSGT00940000168541	ENSGT00940000155904.q.b
Anatidae	ANCESTRAL SPECIES	49	ENSGT00940000161414	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000162710.l	ENSGT00940000155036.x #12	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a.f #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00960000192722	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT01100000263503.C	ENSGT01100000263503.D	ENSGT01100000263572.a.b.a	ENSGT01100000263572.a.b.b	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263499.a.b	ENSGT00940000155566.c.a	ENSGT00950000182881.a.b.a.b	ENSGT00940000168541
Pink-footed goose	MODERN SPECIES	359	TMEM109 (ENSABRG00000021953)	TMEM132A (ENSABRG00000021952)	ENSABRG00000021948	ENSABRG00000021941	VPS37C (ENSABRG00000021938) #11	ENSABRG00000021928	ENSABRG00000021910 #12	VWCE (ENSABRG00000021897) #13	DDB1 (ENSABRG00000021891) #14	TKFC (ENSABRG00000021886) #15	ENSABRG00000021885 #17	CPSF7 (ENSABRG00000021883) #19	ENSABRG00000021881 #16	SDHAF2 (ENSABRG00000021876) #20	ENSABRG00000021880	LRRC10B (ENSABRG00000021874) #22	SYT7 (ENSABRG00000021872) #23
Duck	MODERN SPECIES	23	CD6 (ENSAPLG00000018616) #8	ENSAPLG00000018569	VPS37C (ENSAPLG00000029540) #11	ENSAPLG00000007772	ENSAPLG00000018017	ENSAPLG00000030365 #12	ENSAPLG00000016846 #12	ENSAPLG00000024381	DDB1 (ENSAPLG00000007174) #14	CYB561A3 (ENSAPLG00000020569) #16	TKFC (ENSAPLG00000017549) #15	TMEM138 (ENSAPLG00000007101) #17	TMEM216 (ENSAPLG00000024444) #18	CPSF7 (ENSAPLG00000006963) #19	ENSAPLG00000021531	LRRC10B (ENSAPLG00000018904) #22	SYT7 (ENSAPLG00000006747) #23	DAGLA (ENSAPLG00000006415) #25	MYRF (ENSAPLG00000006054) #26	ENSAPLG00000027992	ENSAPLG00000001717	ENSAPLG00000001695	ENSAPLG00000005768	TMEM258 (ENSAPLG00000006035) #28	FEN1 (ENSAPLG00000001725) #29	ENSAPLG00000001539	ENSAPLG00000030070	ENSAPLG00000030469	ENSAPLG00000013419	ENSAPLG00000022457	TCIRG1 (ENSAPLG00000013129)
Phasianidae	ANCESTRAL SPECIES	26	ENSGT00940000153662.A	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768.a	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT00940000163374	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.a.b	ENSGT00940000168541	ENSGT00940000155904.q.a.a	ENSGT00940000155904.q.b
Phasianidae_b	ANCESTRAL SPECIES	34	ENSGT00940000161414	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768.a	ENSGT00940000155036.x #12	ENSGT00940000167768.b	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263498.a.b.b.a.a.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.a.b	ENSGT00940000155904.q.a.a	ENSGT00940000155904.q.b	ENSGT00530000063359.B
Chicken	MODERN SPECIES	34	PRPF19 (ENSGALG00010020449)	TMEM109 (ENSGALG00010020473)	TMEM132A (ENSGALG00010020476)	CD6 (ENSGALG00010019520) #8	CD5 (ENSGALG00010019580)	VPS37C (ENSGALG00010019646) #11	PGA5 (ENSGALG00010019695)	ENSGALG00010019698	VWCE (ENSGALG00010019771) #13	DDB1 (ENSGALG00010019896) #14	TKFC (ENSGALG00010019934) #15	CYB561A3 (ENSGALG00010019954) #16	TMEM138 (ENSGALG00010020064) #17	TMEM216 (ENSGALG00010020069) #18	CPSF7 (ENSGALG00010020075) #19	SDHAF2 (ENSGALG00010020092) #22	SYT7 (ENSGALG00010020160) #23	DAGLA (ENSGALG00010021181) #25	MYRF (ENSGALG00010021191) #26	TMEM258 (ENSGALG00010021199) #28	FEN1 (ENSGALG00010021211) #29	ENSGALG00010023786	ENSGALG00010021216	ENSGALG00010023790	ENSGALG00010023801	ENSGALG00010021225	TCIRG1 (ENSGALG00010024149)	NDUFS8 (ENSGALG00010021238)	ENSGALG00010021284	ENSGALG00010021441	ENSGALG00010024158
Turkey	MODERN SPECIES	25	ENSMGAG00000020409	ENSMGAG00000004021	ENSMGAG00000003996	ENSMGAG00000016472	ENSMGAG00000018630	ENSMGAG00000004407	MYRF (ENSMGAG00000004733) #26	ENSMGAG00000004684 #28	ENSMGAG00000021352	FEN1 (ENSMGAG00000015781) #29	ENSMGAG00000004435	ENSMGAG00000004794 #25	ENSMGAG00000020740	ENSMGAG00000004876 #19	SDHAF2 (ENSMGAG00000004867) #20	LRRC10B (ENSMGAG00000004864) #22	SYT7 (ENSMGAG00000004836) #23	ENSMGAG00000018189	TMEM109 (ENSMGAG00000003167)	TMEM132A (ENSMGAG00000003140)	CD6 (ENSMGAG00000005214) #8	ENSMGAG00000005183	VPS37C (ENSMGAG00000021499) #11	ENSMGAG00000005103	ENSMGAG00000018660 #12	DDB1 (ENSMGAG00000004990) #14	TKFC (ENSMGAG00000004936) #15	CYB561A3 (ENSMGAG00000004917) #16	TMEM138 (ENSMGAG00000004906) #17	TMEM216 (ENSMGAG00000004904) #18	ENSMGAG00000003304
Japanese quail	MODERN SPECIES	23	TMEM109 (ENSCJPG00005013174)	TMEM132A (ENSCJPG00005013175)	CD6 (ENSCJPG00005013176) #8	ENSCJPG00005013177	VPS37C (ENSCJPG00005013178) #11	ENSCJPG00005013179	ENSCJPG00005013180	VWCE (ENSCJPG00005013181) #13	DDB1 (ENSCJPG00005013182) #14	TKFC (ENSCJPG00005013183) #15	CYB561A3 (ENSCJPG00005013184) #16	TMEM138 (ENSCJPG00005013185) #17	TMEM216 (ENSCJPG00005013186) #18	CPSF7 (ENSCJPG00005013187) #19	SDHAF2 (ENSCJPG00005013188) #20	LRRC10B (ENSCJPG00005013190) #22	SYT7 (ENSCJPG00005013191) #23	DAGLA (ENSCJPG00005013192) #25	MYRF (ENSCJPG00005013193) #26	ENSCJPG00005013194	FEN1 (ENSCJPG00005013196) #29	ENSCJPG00005013197	ENSCJPG00005013198	ENSCJPG00005013199	ENSCJPG00005013201	ENSCJPG00005013208	ENSCJPG00005013231	TCIRG1 (ENSCJPG00005013233)	ENSCJPG00005013234	ENSCJPG00005013238	ENSCJPG00005013244
Neognathae_b	ANCESTRAL SPECIES	14	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00960000192722	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT00940000154816.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b	ENSGT00530000063359.B	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848
Neognathae_c	ANCESTRAL SPECIES	17	ENSGT00940000153662.A	ENSGT00940000161414	ENSGT00940000161889 #7	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00960000192722	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT01100000263572.b	ENSGT01100000263499.a.a.d	ENSGT01100000263499.a.a.c	ENSGT00940000154816.b	ENSGT01100000263498.a.b.b.b	ENSGT01100000263498.a.b.b.a.a.a	ENSGT01100000263499.a.b	ENSGT00950000182881.a.b.a.b	ENSGT00390000003049	ENSGT00940000155904.q.b
Kakapo	MODERN SPECIES	21	ENSSHBG00005018775	PRPF19 (ENSSHBG00005018763)	TMEM132A (ENSSHBG00005018758)	ENSSHBG00005018753	VPS37C (ENSSHBG00005018748) #11	ENSSHBG00005018737	VWCE (ENSSHBG00005018729) #13	DDB1 (ENSSHBG00005018722) #14	TKFC (ENSSHBG00005018702) #15	CYB561A3 (ENSSHBG00005018693) #16	TMEM138 (ENSSHBG00005018689) #17	TMEM216 (ENSSHBG00005018688) #18	CPSF7 (ENSSHBG00005018685) #19	SDHAF2 (ENSSHBG00005018682) #20	ENSSHBG00005018680	LRRC10B (ENSSHBG00005018675) #22	SYT7 (ENSSHBG00005018669) #23	DAGLA (ENSSHBG00005018661) #25	ENSSHBG00005018653	MYRF (ENSSHBG00005018646) #26	ENSSHBG00005018644	FEN1 (ENSSHBG00005018642) #29	ENSSHBG00005018639	ENSSHBG00005018636	ENSSHBG00005018626	ENSSHBG00005018612	ENSSHBG00005018589	ENSSHBG00005018577	NDUFS8 (ENSSHBG00005018555)	ENSSHBG00005018550	ENSSHBG00005018248
Golden eagle	MODERN SPECIES	7	PRPF19 (ENSACCG00020011674)	TMEM132A (ENSACCG00020011751)	SLC15A3 (ENSACCG00020011816) #7	ENSACCG00020011851	ENSACCG00020011928	VPS37C (ENSACCG00020011971) #11	ENSACCG00020012108	ENSACCG00020012172	DDB1 (ENSACCG00020012215) #14	TKFC (ENSACCG00020012290) #15	CYB561A3 (ENSACCG00020012432) #16	TMEM138 (ENSACCG00020012452) #17	TMEM216 (ENSACCG00020012474) #18	ENSACCG00020012497 #19	SDHAF2 (ENSACCG00020012511) #20	LRRC10B (ENSACCG00020012541) #22	SYT7 (ENSACCG00020012563) #23	DAGLA (ENSACCG00020012603) #25	MYRF (ENSACCG00020012724) #26	TMEM258 (ENSACCG00020012864) #28	FEN1 (ENSACCG00020012876) #29	ENSACCG00020012892	ENSACCG00020012905	ENSACCG00020012919	ENSACCG00020012930	ENSACCG00020012963	ENSACCG00020012981	OR9G1 (ENSACCG00020013005)	ENSACCG00020013027	ENSACCG00020013041	ENSACCG00020013058
Passeriformes	ANCESTRAL SPECIES	25	ENSGT00940000153662.A	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT00530000063370.a.a	ENSGT00950000182992.a.b.a.b	ENSGT00440000033849	ENSGT00390000007057	ENSGT00940000155132	ENSGT00940000164715	ENSGT00940000164949	ENSGT00390000005535
Great tit	MODERN SPECIES	25	ZP1 (ENSPMJG00000006893)	PRPF19 (ENSPMJG00000006887)	ENSPMJG00000006885	TMEM132A (ENSPMJG00000006881)	CD6 (ENSPMJG00000006875) #8	ENSPMJG00000006871	VPS37C (ENSPMJG00000006869) #11	ENSPMJG00000006862	VWCE (ENSPMJG00000006828) #13	DDB1 (ENSPMJG00000006825) #14	TKFC (ENSPMJG00000006823) #15	CYB561A3 (ENSPMJG00000006819) #16	ENSPMJG00000006811 #18	CPSF7 (ENSPMJG00000006809) #19	SDHAF2 (ENSPMJG00000006800) #20	LRRC10B (ENSPMJG00000006795) #22	ENSPMJG00000006791	SYT7 (ENSPMJG00000006781) #23	DAGLA (ENSPMJG00000006765) #25	MYRF (ENSPMJG00000006743) #26	ENSPMJG00000006738 #28	FEN1 (ENSPMJG00000006734) #29	ENSPMJG00000006733	ENSPMJG00000006727	ENSPMJG00000006691	ENSPMJG00000006677	ENSPMJG00000006655	RMDN3 (ENSPMJG00000006650)	GCHFR (ENSPMJG00000006642)	C15orf62 (ENSPMJG00000006640)	DNAJC17 (ENSPMJG00000006637)
Passeriformes_d	ANCESTRAL SPECIES	24	ENSGT00940000153662.A	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT01060000248781	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT00530000063370.a.a	ENSGT00950000182992.a.b.a.b	ENSGT00440000033849	ENSGT00390000007057	ENSGT00940000155132	ENSGT00940000164715	ENSGT00940000164949	ENSGT00390000005535
Passeriformes_g	ANCESTRAL SPECIES		ENSGT00940000153662.A	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT00530000063370.a.a	ENSGT00950000182992.a.b.a.b	ENSGT00440000033849	ENSGT00390000007057	ENSGT00940000155132	ENSGT00940000164715	ENSGT00940000164949	ENSGT00390000005535	ENSGT00930000151035.a
Passeroidea	ANCESTRAL SPECIES	1	ENSGT00940000153662.A	ENSGT00390000015704	ENSGT00940000161414	ENSGT00940000161029 #8	ENSGT00940000167155	ENSGT00950000183012.A.b #11	ENSGT00940000167768	ENSGT00940000161089 #13	ENSGT00950000183151.a.a.a #14	ENSGT00390000015415 #15	ENSGT00950000183197.b.a #16	ENSGT00390000018587 #17	ENSGT00940000153899.a.a #18	ENSGT00730000110905.a #19	ENSGT00390000001149 #20	ENSGT00940000155040.a #22	ENSGT00940000157180 #23	ENSGT00940000161192 #25	ENSGT00530000063626.a #26	ENSGT00390000010089 #28	ENSGT00940000155807.a #29	ENSGT00960000188779	ENSGT00530000063370.a.a	ENSGT00950000182992.a.b.a.b	ENSGT00440000033849	ENSGT00390000007057	ENSGT00940000155132	ENSGT00940000164715	ENSGT00940000164949	ENSGT00390000005535	ENSGT00930000151035.a
Zebra finch	MODERN SPECIES	27	PRPF19 (ENSTGUG00000006319)	TMEM109 (ENSTGUG00000006345)	TMEM132A (ENSTGUG00000006351)	ENSTGUG00000006362 #8	ENSTGUG00000006369	VPS37C (ENSTGUG00000018909) #11	ENSTGUG00000006387	ENSTGUG00000006410 #13	DDB1 (ENSTGUG00000006414) #14	TKFC (ENSTGUG00000006479) #15	CYBASC3 (ENSTGUG00000006507) #16	TMEM138 (ENSTGUG00000026595) #17	TMEM216 (ENSTGUG00000006511) #18	CPSF7 (ENSTGUG00000006513) #19	SDHAF2 (ENSTGUG00000027564) #20	LRRC10B (ENSTGUG00000006528) #22	SYT7 (ENSTGUG00000006531) #23	DAGLA (ENSTGUG00000006570) #25	MYRF (ENSTGUG00000006600) #26	TMEM258 (ENSTGUG00000021636) #28	FEN1 (ENSTGUG00000006627) #29	ENSTGUG00000006630	RMDN3 (ENSTGUG00000006637)	ENSTGUG00000006659	DNAJC17 (ENSTGUG00000026553)	C15orf62 (ENSTGUG00000006683)	ENSTGUG00000006685	ENSTGUG00000022591	MRPL21 (ENSTGUG00000006693)	IGHMBP2 (ENSTGUG00000006705)	SYT12 (ENSTGUG00000006722)
Common canary	MODERN SPECIES	45	ENSSCAG00000009773	TMEM132A (ENSSCAG00000009778)	ENSSCAG00000009790 #8	ENSSCAG00000009802	VPS37C (ENSSCAG00000009807) #11	ENSSCAG00000009813	ENSSCAG00000009819	DDB1 (ENSSCAG00000009823) #14	CYB561A3 (ENSSCAG00000009828) #16	TKFC (ENSSCAG00000009831) #15	TMEM138 (ENSSCAG00000009836) #17	TMEM216 (ENSSCAG00000009841) #18	ENSSCAG00000009844 #19	ENSSCAG00000009846 #19	SDHAF2 (ENSSCAG00000009848) #20	LRRC10B (ENSSCAG00000009852) #22	SYT7 (ENSSCAG00000009858) #23	DAGLA (ENSSCAG00000009872) #25	MYRF (ENSSCAG00000009943) #26	TMEM258 (ENSSCAG00000009954) #28	FEN1 (ENSSCAG00000009957) #29	ENSSCAG00000009959	ENSSCAG00000009962	RTN4RL2 (ENSSCAG00000009969)	TIMM10 (ENSSCAG00000009972)	YPEL4 (ENSSCAG00000009975)	CLP1 (ENSSCAG00000009980)	ZDHHC5 (ENSSCAG00000009995)	MED19 (ENSSCAG00000010014)	ENSSCAG00000010016	CTNND1 (ENSSCAG00000010027)
Flycatcher	MODERN SPECIES	24	CCDC86 (ENSFALG00000028475)	ENSFALG00000012107	ZP1 (ENSFALG00000012091)	PRPF19 (ENSFALG00000012084)	TMEM109 (ENSFALG00000012077)	TMEM132A (ENSFALG00000012067)	ENSFALG00000024710 #8	ENSFALG00000012049	VPS37C (ENSFALG00000012043) #11	ENSFALG00000012015	DDB1 (ENSFALG00000011981) #14	TKFC (ENSFALG00000011973) #15	CYB561A3 (ENSFALG00000011962) #16	ENSFALG00000023293 #17	ENSFALG00000011927 #19	LRRC10B (ENSFALG00000011911) #22	SYT7 (ENSFALG00000011878) #23	ENSFALG00000026476	DAGLA (ENSFALG00000011845) #25	MYRF (ENSFALG00000011806) #26	TMEM258 (ENSFALG00000011791) #28	FEN1 (ENSFALG00000011788) #29	ENSFALG00000025646	ENSFALG00000024404	ENSFALG00000011768	RMDN3 (ENSFALG00000011750)	GCHFR (ENSFALG00000028029)	DNAJC17 (ENSFALG00000011719)	C15orf62 (ENSFALG00000015327)	ENSFALG00000011705	ENSFALG00000011693
Australian saltwater crocodile	MODERN SPECIES	55	ENSCPRG00005010011	RNH1 (ENSCPRG00005010012)	ENSCPRG00005010034	HRAS (ENSCPRG00005010057)	LRRC56 (ENSCPRG00005010068)	ENSCPRG00005010077	RASSF7 (ENSCPRG00005010092)	ENSCPRG00005010105	ENSCPRG00005010113	IRF7 (ENSCPRG00005010123)	ENSCPRG00005010132	DRD4 (ENSCPRG00005010135)	DEAF1 (ENSCPRG00005010140)	TMEM80 (ENSCPRG00005010143) ##18	ENSCPRG00005010144	LRRC10B (ENSCPRG00005010148) #22	SYT7 (ENSCPRG00005010151) #23	DAGLA (ENSCPRG00005010164) #25	MYRF (ENSCPRG00005010178) #26	TMEM258 (ENSCPRG00005010183) #28	FEN1 (ENSCPRG00005010185) #29	ENSCPRG00005010187	ENSCPRG00005010203 ##34	ENSCPRG00005010261	TCIRG1 (ENSCPRG00005010269)	ENSCPRG00005010288	ENSCPRG00005010291	CHURC1 (ENSCPRG00005010294)	ENSCPRG00005010299	ENSCPRG00005010317	UNC93B1 (ENSCPRG00005010370)
Anura	ANCESTRAL SPECIES	559															ENSGT00390000002752	ENSGT00940000155040.a #22
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000012800	CYB5R2 (ENSLLEG00000012735)	PPFIBP2 (ENSLLEG00000011845)	OLFML1 (ENSLLEG00000011753)	SYT9 (ENSLLEG00000011656)	ENSLLEG00000011632	SPON1 (ENSLLEG00000010834)	IFITM5 (ENSLLEG00000010742)	ENSLLEG00000010680	ENSLLEG00000010656	ENSLLEG00000010582	PSMD13 (ENSLLEG00000010333)	SIRT3 (ENSLLEG00000010141)	ENSLLEG00000010062	PTS (ENSLLEG00000010010)	LRRC10B (ENSLLEG00000009985) #22	ENSLLEG00000009967	ENSLLEG00000009932	ENSLLEG00000009760	ENSLLEG00000009693	ANO3 (ENSLLEG00000008893)	LUZP2 (ENSLLEG00000008465)	ENSLLEG00000008389	ENSLLEG00000024419	KCNQ1 (ENSLLEG00000024234)	PTDSS2 (ENSLLEG00000024015)	SYT12 (ENSLLEG00000023939)	IGHMBP2 (ENSLLEG00000023653)	ENSLLEG00000023580	ENSLLEG00000023341	ENSLLEG00000023296
Frog	MODERN SPECIES	4	ENSXETG00000048623	ENSXETG00000048841	ENSXETG00000048205	ppp6r3 (ENSXETG00000002985)	vwce (ENSXETG00000031778) #13	fut5 (ENSXETG00000033979)	ENSXETG00000008818	ENSXETG00000030866	ENSXETG00000044748	ddb1 (ENSXETG00000008820) #14	tkfc (ENSXETG00000008822) #15	bet1l (ENSXETG00000008825)	SIRT3 (ENSXETG00000032567)	psmd13 (ENSXETG00000008827)	pts (ENSXETG00000034891)	ENSXETG00000008831 #22	syt7 (ENSXETG00000008832) #23	dagla (ENSXETG00000006696) #25	myrf (ENSXETG00000006702) #26	tmem258 (ENSXETG00000027540) #28	fen1 (ENSXETG00000006703) #29	sigirr (ENSXETG00000006704)	pkp3 (ENSXETG00000006706)	b4galnt4 (ENSXETG00000006707)	ENSXETG00000036115	ifitm1 (ENSXETG00000030477)	ifitm3 (ENSXETG00000006711)	ifitm5 (ENSXETG00000048235)	ENSXETG00000046924	ENSXETG00000035320	ENSXETG00000041157