Euteleostomi ANCESTRAL SPECIES 34 ENSGT00940000162506 ENSGT00950000183200.A.a.a ENSGT00940000160158 ENSGT00390000012084 ENSGT00950000183168.D ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.b.b.b.b.b.b.b ##11 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 Sarcopterygii ANCESTRAL SPECIES 52 ENSGT00390000003919 ENSGT00940000162506 ENSGT00950000183200.A.a.a ENSGT00940000160158 ENSGT00390000012084 ENSGT00950000183168.D ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.b.b.b.b.b.b.b ##11 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 Tetrapoda ANCESTRAL SPECIES ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.D ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00940000175059 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000154907.b #32 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 ENSGT00390000004663 Amniota ANCESTRAL SPECIES ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 Mammalia ANCESTRAL SPECIES 73 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000162428 Theria ANCESTRAL SPECIES 15 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000166491 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Eutheria ANCESTRAL SPECIES 3 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00940000154175.j ##24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00940000154175.j ##24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Glires ANCESTRAL SPECIES 1 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Rodentia ANCESTRAL SPECIES 1 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Rodentia_A ANCESTRAL SPECIES 1 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Sciuridae ANCESTRAL SPECIES 2 ENSGT00940000162152.h ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Marmotini ANCESTRAL SPECIES 20 ENSGT00940000162152.h ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b.e #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00950000182999.a.b Alpin marmot MODERN SPECIES 25 ENSMMMG00000003554 #7 FAM76B (ENSMMMG00000003496) #8 CEP57 (ENSMMMG00000003431) #9 MTMR2 (ENSMMMG00000003375) #10 ENSMMMG00000003357 #11 ENSMMMG00000003341 #12 CCDC82 (ENSMMMG00000003266) #13 JRKL (ENSMMMG00000003254) #14 ENSMMMG00000003243 #15 CNTN5 (ENSMMMG00000003014) #16 ARHGAP42 (ENSMMMG00000002945) #17 PGR (ENSMMMG00000002898) #18 TRPC6 (ENSMMMG00000002831) #19 ANGPTL5 (ENSMMMG00000002794) #20 CEP126 (ENSMMMG00000002769) #21 CFAP300 (ENSMMMG00000002751) #22 YAP1 (ENSMMMG00000002718) #23 BIRC3 (ENSMMMG00000002693) #24 ENSMMMG00000002595 #25 TMEM123 (ENSMMMG00000002579) #26 MMP7 (ENSMMMG00000002551) #27 MMP20 (ENSMMMG00000002519) #28 MMP27 (ENSMMMG00000002490) #29 MMP8 (ENSMMMG00000002471) #30 ENSMMMG00000002452 #31 MMP1 (ENSMMMG00000002402) #32 MMP3 (ENSMMMG00000002377) #33 MMP12 (ENSMMMG00000002359) #34 MMP13 (ENSMMMG00000002337) #35 DCUN1D5 (ENSMMMG00000002318) #36 DYNC2H1 (ENSMMMG00000001718) #37 Marmotini_b ANCESTRAL SPECIES 122 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b.e #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00950000182999.a.b Arctic ground squirrel MODERN SPECIES 103 CNTN5 (ENSUPAG00010019303) #16 ARHGAP42 (ENSUPAG00010019399) #17 PGR (ENSUPAG00010019431) #18 TRPC6 (ENSUPAG00010019447) #19 ANGPTL5 (ENSUPAG00010019480) #20 CEP126 (ENSUPAG00010019487) #21 CFAP300 (ENSUPAG00010019501) #22 YAP1 (ENSUPAG00010019515) #23 BIRC3 (ENSUPAG00010019528) #24 BIRC2 (ENSUPAG00010019549) #25 TMEM123 (ENSUPAG00010019562) #26 MMP7 (ENSUPAG00010019569) #27 MMP20 (ENSUPAG00010019573) #28 MMP27 (ENSUPAG00010019583) #29 MMP8 (ENSUPAG00010019593) #30 MMP3 (ENSUPAG00010019608) #31 MMP1 (ENSUPAG00010019633) #32 MMP12 (ENSUPAG00010019655) #34 MMP13 (ENSUPAG00010019662) #35 DCUN1D5 (ENSUPAG00010019672) #36 DYNC2H1 (ENSUPAG00010019688) #37 PDGFD (ENSUPAG00010019962) Squirrel MODERN SPECIES 151 ENSSTOG00000033385 CNTN5 (ENSSTOG00000003745) #16 ARHGAP42 (ENSSTOG00000010760) #17 PGR (ENSSTOG00000020694) #18 TRPC6 (ENSSTOG00000003077) #19 CEP126 (ENSSTOG00000004605) #21 CFAP300 (ENSSTOG00000011163) #22 YAP1 (ENSSTOG00000004960) #23 BIRC3 (ENSSTOG00000005734) #24 ENSSTOG00000005754 #25 ENSSTOG00000026499 TMEM123 (ENSSTOG00000032785) #26 MMP7 (ENSSTOG00000027961) #27 MMP20 (ENSSTOG00000023437) #28 MMP27 (ENSSTOG00000008513) #29 MMP8 (ENSSTOG00000008539) #30 ENSSTOG00000008555 #31 MMP1 (ENSSTOG00000008571) #32 MMP3 (ENSSTOG00000008584) #31 MMP12 (ENSSTOG00000008600) #34 MMP13 (ENSSTOG00000008612) #35 DCUN1D5 (ENSSTOG00000013580) #36 Eurasian red squirrel MODERN SPECIES 2 CEP57 (ENSSVLG00005010241) #9 MTMR2 (ENSSVLG00005010367) #10 ENSSVLG00005010533 #11 CCDC82 (ENSSVLG00005010580) #13 JRKL (ENSSVLG00005010894) #14 ENSSVLG00005010908 ENSSVLG00005010963 CNTN5 (ENSSVLG00005011074) #16 ARHGAP42 (ENSSVLG00005012065) #17 PGR (ENSSVLG00005012195) #18 ENSSVLG00005012488 TRPC6 (ENSSVLG00005012644) #19 ENSSVLG00005013071 ANGPTL5 (ENSSVLG00005013174) #20 CEP126 (ENSSVLG00005013261) #21 CFAP300 (ENSSVLG00005013383) #22 YAP1 (ENSSVLG00005013738) #23 BIRC3 (ENSSVLG00005013872) #24 BIRC2 (ENSSVLG00005013957) #25 TMEM123 (ENSSVLG00005014049) #26 MMP7 (ENSSVLG00005014206) #27 MMP20 (ENSSVLG00005014300) #28 MMP27 (ENSSVLG00005014388) #29 MMP8 (ENSSVLG00005014523) #30 MMP10 (ENSSVLG00005014643) MMP1 (ENSSVLG00005014774) #32 MMP3 (ENSSVLG00005014901) #31 MMP12 (ENSSVLG00005015038) #34 MMP13 (ENSSVLG00005015162) #35 DCUN1D5 (ENSSVLG00005015275) #36 DYNC2H1 (ENSSVLG00005015721) #37 Hystricomorpha ANCESTRAL SPECIES 5 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Naked mole-rat female MODERN SPECIES 24 ENSHGLG00000016013 ENSHGLG00000042652 MMP12 (ENSHGLG00000001493) #34 MMP3 (ENSHGLG00000001578) #31 MMP1 (ENSHGLG00000002821) #32 MMP10 (ENSHGLG00000003158) MMP8 (ENSHGLG00000003235) #30 ENSHGLG00000003321 #29 ENSHGLG00000002861 #16 ENSHGLG00000000253 #17 PGR (ENSHGLG00000001843) #18 TRPC6 (ENSHGLG00000000680) #19 ENSHGLG00000000414 ANGPTL5 (ENSHGLG00000047251) #20 CEP126 (ENSHGLG00000000639) #21 CFAP300 (ENSHGLG00000048492) #22 YAP1 (ENSHGLG00000000291) #23 ENSHGLG00000019794 ENSHGLG00000005333 BIRC3 (ENSHGLG00000004954) #24 BIRC2 (ENSHGLG00000004179) #25 ENSHGLG00000044313 ENSHGLG00000047684 #26 MMP7 (ENSHGLG00000003863) #27 ENSHGLG00000003570 #28 ENSHGLG00000042812 ENSHGLG00000041631 ENSHGLG00000041058 CCDC82 (ENSHGLG00000013992) #13 JRKL (ENSHGLG00000049214) #14 ENSHGLG00000049135 Hystricomorpha_a ANCESTRAL SPECIES 10 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Guinea pig MODERN SPECIES 19 ENDOD1 (ENSCPOG00000002204) SESN3 (ENSCPOG00000019467) FAM76B (ENSCPOG00000040456) #8 CEP57 (ENSCPOG00000008497) #9 MTMR2 (ENSCPOG00000008505) #10 MAML2 (ENSCPOG00000008516) #11 CCDC82 (ENSCPOG00000033086) #13 CNTN5 (ENSCPOG00000011322) #16 ARHGAP42 (ENSCPOG00000007842) #17 ENSCPOG00000030258 #18 TRPC6 (ENSCPOG00000005560) #19 ANGPTL5 (ENSCPOG00000001842) #20 CEP126 (ENSCPOG00000001844) #21 CFAP300 (ENSCPOG00000011737) #22 YAP1 (ENSCPOG00000033105) #23 BIRC3 (ENSCPOG00000034907) #24 BIRC2 (ENSCPOG00000010349) #25 ENSCPOG00000038069 #27 MMP20 (ENSCPOG00000036970) #28 MMP27 (ENSCPOG00000035593) #29 MMP8 (ENSCPOG00000013813) #30 MMP10 (ENSCPOG00000035812) MMP1 (ENSCPOG00000006548) #32 MMP3 (ENSCPOG00000033163) #31 MMP12 (ENSCPOG00000036913) #34 MMP13 (ENSCPOG00000000221) #35 DCUN1D5 (ENSCPOG00000036831) #36 DYNC2H1 (ENSCPOG00000014189) #37 PDGFD (ENSCPOG00000038919) Hystricomorpha_b ANCESTRAL SPECIES 23 ENSGT00940000160158 ENSGT00390000012084.u ENSGT00940000162152 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Degu MODERN SPECIES 53 CEP57 (ENSODEG00000013214) #9 MTMR2 (ENSODEG00000013402) #10 ENSODEG00000020097 MAML2 (ENSODEG00000015630) #11 CCDC82 (ENSODEG00000012847) #13 JRKL (ENSODEG00000020217) #14 ENSODEG00000014051 ENSODEG00000012986 CNTN5 (ENSODEG00000014105) #16 ENSODEG00000013901 ARHGAP42 (ENSODEG00000013928) #17 ENSODEG00000013619 #18 TRPC6 (ENSODEG00000014288) #19 ENSODEG00000013426 CEP126 (ENSODEG00000014031) #21 CFAP300 (ENSODEG00000014307) #22 ENSODEG00000013051 YAP1 (ENSODEG00000012897) #23 ENSODEG00000012579 ENSODEG00000013275 #24 ENSODEG00000012602 #25 MMP7 (ENSODEG00000012568) #27 MMP20 (ENSODEG00000012590) #28 MMP27 (ENSODEG00000012636) #29 MMP8 (ENSODEG00000013316) #30 MMP10 (ENSODEG00000014848) MMP3 (ENSODEG00000012755) #31 MMP12 (ENSODEG00000012714) #34 MMP13 (ENSODEG00000012128) #35 DCUN1D5 (ENSODEG00000012893) #36 DYNC2H1 (ENSODEG00000012699) #37 Long-tailed chinchilla MODERN SPECIES 119 SESN3 (ENSCLAG00000016066) FAM76B (ENSCLAG00000010250) #8 ENSCLAG00000011257 #9 MTMR2 (ENSCLAG00000011747) #10 MAML2 (ENSCLAG00000014659) #11 CCDC82 (ENSCLAG00000014287) #13 JRKL (ENSCLAG00000017853) #14 ENSCLAG00000018078 CNTN5 (ENSCLAG00000010625) #16 ARHGAP42 (ENSCLAG00000014100) #17 ENSCLAG00000013886 #18 TRPC6 (ENSCLAG00000011949) #19 CEP126 (ENSCLAG00000012819) #21 CFAP300 (ENSCLAG00000013914) #22 YAP1 (ENSCLAG00000011113) #23 BIRC3 (ENSCLAG00000010783) #24 BIRC2 (ENSCLAG00000013394) #25 MMP7 (ENSCLAG00000015356) #27 MMP20 (ENSCLAG00000013214) #28 MMP27 (ENSCLAG00000010798) #29 MMP8 (ENSCLAG00000014040) #30 MMP10 (ENSCLAG00000013443) MMP1 (ENSCLAG00000011491) #32 MMP3 (ENSCLAG00000012886) #31 MMP12 (ENSCLAG00000014288) #34 MMP13 (ENSCLAG00000011293) #35 DCUN1D5 (ENSCLAG00000010606) #36 DYNC2H1 (ENSCLAG00000014268) #37 PDGFD (ENSCLAG00000013637) Rodentia_B ANCESTRAL SPECIES 23 ENSGT00390000012084 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Myomorpha ANCESTRAL SPECIES 23 ENSGT00390000012084 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Muroidea ANCESTRAL SPECIES 29 ENSGT00390000012084 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Muroidea_A ANCESTRAL SPECIES 23 ENSGT00390000012084 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00940000167787 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759.h #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Cricetinae ANCESTRAL SPECIES 45 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00940000167787 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759.h #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00950000182999.a.b ENSGT00940000159575 Chinese hamster chok1gshd MODERN SPECIES 202 Sesn3 (ENSCGRG00001021337) Fam76b (ENSCGRG00001010539) #8 Cep57 (ENSCGRG00001022050) #9 Mtmr2 (ENSCGRG00001014347) #10 Maml2 (ENSCGRG00001007799) #11 ENSCGRG00001023836 Ccdc82 (ENSCGRG00001017832) #13 Jrkl (ENSCGRG00001010876) #14 ENSCGRG00001023105 Cntn5 (ENSCGRG00001022628) #16 ENSCGRG00001007078 Arhgap42 (ENSCGRG00001000196) #17 Pgr (ENSCGRG00001019400) #18 Trpc6 (ENSCGRG00001006368) #19 Cep126 (ENSCGRG00001023949) #21 Cfap300 (ENSCGRG00001021391) #22 Yap1 (ENSCGRG00001011573) #23 Birc3 (ENSCGRG00001008505) #24 Birc2 (ENSCGRG00001023266) #25 ENSCGRG00001022513 Tmem123 (ENSCGRG00001018797) #26 ENSCGRG00001015482 #35 Mmp20 (ENSCGRG00001000330) #28 Mmp27 (ENSCGRG00001021757) #29 Mmp8 (ENSCGRG00001015038) #30 ENSCGRG00001014094 ENSCGRG00001020530 #32 ENSCGRG00001009381 Mmp3 (ENSCGRG00001015501) #31 Mmp12 (ENSCGRG00001013053) #34 Mmp13 (ENSCGRG00001006492) #35 Golden Hamster MODERN SPECIES 688 Fam76b (ENSMAUG00000008271) #8 Cep57 (ENSMAUG00000016167) #9 Mtmr2 (ENSMAUG00000014568) #10 Maml2 (ENSMAUG00000012350) #11 Ccdc82 (ENSMAUG00000019538) #13 Jrkl (ENSMAUG00000016872) #14 Cntn5 (ENSMAUG00000012675) #16 Arhgap42 (ENSMAUG00000012529) #17 Pgr (ENSMAUG00000019127) #18 Trpc6 (ENSMAUG00000014533) #19 Cep126 (ENSMAUG00000013444) #21 Cfap300 (ENSMAUG00000011879) #22 Birc2 (ENSMAUG00000018063) #25 ENSMAUG00000016756 #31 Mmp20 (ENSMAUG00000011367) #28 Mmp27 (ENSMAUG00000000778) #29 ENSMAUG00000009988 #32 Mmp3 (ENSMAUG00000011335) #31 Mmp12 (ENSMAUG00000008249) #34 Mmp13 (ENSMAUG00000001270) #35 Dcun1d5 (ENSMAUG00000011071) #36 Dync2h1 (ENSMAUG00000015798) #37 Pdgfd (ENSMAUG00000012917) Ddi1 (ENSMAUG00000016614) Casp1 (ENSMAUG00000010193) ENSMAUG00000016775 Msantd4 (ENSMAUG00000009891) Cricetidae_B ANCESTRAL SPECIES 58 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00940000167787 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759.h #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Prairie vole MODERN SPECIES 13 Mtmr2 (ENSMOCG00000009930) #10 Maml2 (ENSMOCG00000021568) #11 ENSMOCG00000019222 Ccdc82 (ENSMOCG00000019062) #13 Jrkl (ENSMOCG00000004889) #14 ENSMOCG00000022546 ENSMOCG00000021331 Cntn5 (ENSMOCG00000021354) #16 ENSMOCG00000008541 Arhgap42 (ENSMOCG00000004053) #17 Pgr (ENSMOCG00000016670) #18 Trpc6 (ENSMOCG00000021166) #19 ENSMOCG00000006458 ENSMOCG00000014609 Cep126 (ENSMOCG00000013353) #21 Cfap300 (ENSMOCG00000013197) #22 Yap1 (ENSMOCG00000007486) #23 Birc3 (ENSMOCG00000013964) #24 Birc2 (ENSMOCG00000010117) #25 Tmem123 (ENSMOCG00000021990) #26 Mmp7 (ENSMOCG00000021222) #27 Mmp20 (ENSMOCG00000019578) #28 Mmp27 (ENSMOCG00000018511) #29 Mmp8 (ENSMOCG00000009399) #30 ENSMOCG00000007239 ENSMOCG00000023030 #32 Mmp3 (ENSMOCG00000006156) #31 Mmp12 (ENSMOCG00000020347) #34 Mmp13 (ENSMOCG00000010248) #35 Dcun1d5 (ENSMOCG00000008925) #36 Dync2h1 (ENSMOCG00000017521) #37 Northern American deer mouse MODERN SPECIES 20 Cep57 (ENSPEMG00000022447) #9 Mtmr2 (ENSPEMG00000018649) #10 ENSPEMG00000022875 #11 ENSPEMG00000008656 ENSPEMG00000022148 Ccdc82 (ENSPEMG00000021515) #13 Jrkl (ENSPEMG00000004693) #14 Cntn5 (ENSPEMG00000011066) #16 ENSPEMG00000024722 Arhgap42 (ENSPEMG00000021176) #17 Pgr (ENSPEMG00000020732) #18 Trpc6 (ENSPEMG00000012248) #19 ENSPEMG00000029807 ENSPEMG00000027711 #20 Cep126 (ENSPEMG00000020512) #21 Cfap300 (ENSPEMG00000021710) #22 Yap1 (ENSPEMG00000022927) #23 Birc3 (ENSPEMG00000020508) #24 Birc2 (ENSPEMG00000018476) #25 Tmem123 (ENSPEMG00000023085) #26 Mmp7 (ENSPEMG00000021337) #27 Mmp20 (ENSPEMG00000011175) #28 Mmp27 (ENSPEMG00000024216) #29 Mmp8 (ENSPEMG00000022864) #30 Mmp10 (ENSPEMG00000021262) #31 ENSPEMG00000020690 #32 Mmp3 (ENSPEMG00000020327) #31 Mmp12 (ENSPEMG00000020371) #34 Mmp13 (ENSPEMG00000011633) #35 Dcun1d5 (ENSPEMG00000020877) #36 Dync2h1 (ENSPEMG00000016383) #37 Murinae ANCESTRAL SPECIES 3 ENSGT00390000012084 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000159759 #31 ENSGT00940000154907.b.m #32 ENSGT00940000154907.b.n #32 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Mus ANCESTRAL SPECIES 4 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00900000143517 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000159759 #31 ENSGT00940000154907.b.m #32 ENSGT00940000154907.b.n #32 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Mus_A ANCESTRAL SPECIES 4 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00900000143517 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00860000136210 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000159759 #31 ENSGT00940000154907.b.m #32 ENSGT00940000154907.b.n #32 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Mus_B ANCESTRAL SPECIES 3 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00900000143517 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00860000136210 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000159759 #31 ENSGT00940000154907.b.m #32 ENSGT00940000154907.b.n #32 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Mouse MODERN SPECIES 18 Kdm4d (ENSMUSG00000053914) Endod1 (ENSMUSG00000037419) Sesn3 (ENSMUSG00000032009) Fam76b (ENSMUSG00000037808) #8 Cep57 (ENSMUSG00000031922) #9 Mtmr2 (ENSMUSG00000031918) #10 Gm17571 (ENSMUSG00000090592) Maml2 (ENSMUSG00000031925) #11 Ccdc82 (ENSMUSG00000079084) #13 Jrkl (ENSMUSG00000079083) #14 Cntn5 (ENSMUSG00000039488) #16 Arhgap42 (ENSMUSG00000050730) #17 Pgr (ENSMUSG00000031870) #18 Trpc6 (ENSMUSG00000031997) #19 Cep126 (ENSMUSG00000040729) #21 Cfap300 (ENSMUSG00000053070) #22 Yap1 (ENSMUSG00000053110) #23 Birc3 (ENSMUSG00000032000) #24 Birc2 (ENSMUSG00000057367) #25 Tmem123 (ENSMUSG00000050912) #26 Mmp7 (ENSMUSG00000018623) #27 Mmp20 (ENSMUSG00000018620) #28 Mmp27 (ENSMUSG00000070323) #29 Mmp8 (ENSMUSG00000005800) #30 Mmp10 (ENSMUSG00000047562) #31 Mmp1a (ENSMUSG00000043089) #32 Mmp3 (ENSMUSG00000043613) #31 Mmp1b (ENSMUSG00000041620) #32 Mmp12 (ENSMUSG00000049723) #34 Mmp13 (ENSMUSG00000050578) #35 Dcun1d5 (ENSMUSG00000032002) #36 Mus_C ANCESTRAL SPECIES 8 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00900000143517 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00860000136210 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000159759 #31 ENSGT00940000154907.b.m #32 ENSGT00940000154907.b.n #32 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Steppe mouse MODERN SPECIES 2658 Trpc6 (ENSMSIG00000022582) #19 Cep126 (ENSMSIG00000022657) #21 Cfap300 (ENSMSIG00000022710) #22 Yap1 (ENSMSIG00000022749) #23 ENSMSIG00000022820 #24 spretus MODERN SPECIES 18 Sesn3 (MGP_SPRETEiJ_G0032899) Fam76b (MGP_SPRETEiJ_G0032898) #8 Cep57 (MGP_SPRETEiJ_G0032897) #9 Mtmr2 (MGP_SPRETEiJ_G0032896) #10 Maml2 (MGP_SPRETEiJ_G0032895) #11 MGP_SPRETEiJ_G0032894 Ccdc82 (MGP_SPRETEiJ_G0032893) #13 Jrkl (MGP_SPRETEiJ_G0032892) #14 Cntn5 (MGP_SPRETEiJ_G0032891) #16 Arhgap42 (MGP_SPRETEiJ_G0032890) #17 MGP_SPRETEiJ_G0032889 Pgr (MGP_SPRETEiJ_G0032888) #18 Trpc6 (MGP_SPRETEiJ_G0032887) #19 MGP_SPRETEiJ_G0032886 Cep126 (MGP_SPRETEiJ_G0032885) #21 Cfap300 (MGP_SPRETEiJ_G0032884) #22 Yap1 (MGP_SPRETEiJ_G0032883) #23 Birc3 (MGP_SPRETEiJ_G0032882) #24 MGP_SPRETEiJ_G0032881 #25 Tmem123 (MGP_SPRETEiJ_G0032880) #26 Mmp7 (MGP_SPRETEiJ_G0032879) #27 Mmp20 (MGP_SPRETEiJ_G0032878) #28 Mmp27 (MGP_SPRETEiJ_G0032877) #29 Mmp8 (MGP_SPRETEiJ_G0032876) #30 MGP_SPRETEiJ_G0032875 #31 MGP_SPRETEiJ_G0032874 #32 MGP_SPRETEiJ_G0032873 #32 MGP_SPRETEiJ_G0032872 #31 Mmp12 (MGP_SPRETEiJ_G0032871) #34 Mmp13 (MGP_SPRETEiJ_G0032870) #35 MGP_SPRETEiJ_G0032869 #36 Ryukyu mouse MODERN SPECIES 18 Sesn3 (MGP_CAROLIEiJ_G0031779) Fam76b (MGP_CAROLIEiJ_G0031778) #8 Cep57 (MGP_CAROLIEiJ_G0031777) #9 Mtmr2 (MGP_CAROLIEiJ_G0031776) #10 Maml2 (MGP_CAROLIEiJ_G0031775) #11 MGP_CAROLIEiJ_G0031774 Ccdc82 (MGP_CAROLIEiJ_G0031773) #13 Jrkl (MGP_CAROLIEiJ_G0031772) #14 Cntn5 (MGP_CAROLIEiJ_G0031771) #16 Arhgap42 (MGP_CAROLIEiJ_G0031770) #17 MGP_CAROLIEiJ_G0031769 Pgr (MGP_CAROLIEiJ_G0031768) #18 Trpc6 (MGP_CAROLIEiJ_G0031767) #19 MGP_CAROLIEiJ_G0031766 Cep126 (MGP_CAROLIEiJ_G0031765) #21 Cfap300 (MGP_CAROLIEiJ_G0031764) #22 Yap1 (MGP_CAROLIEiJ_G0031763) #23 MGP_CAROLIEiJ_G0031762 #24 MGP_CAROLIEiJ_G0031761 ##24 Tmem123 (MGP_CAROLIEiJ_G0031760) #26 Mmp7 (MGP_CAROLIEiJ_G0031759) #27 Mmp20 (MGP_CAROLIEiJ_G0031758) #28 Mmp27 (MGP_CAROLIEiJ_G0031757) #29 Mmp8 (MGP_CAROLIEiJ_G0031756) #30 Mmp10 (MGP_CAROLIEiJ_G0031755) #31 Mmp1a (MGP_CAROLIEiJ_G0031754) #32 Mmp1b (MGP_CAROLIEiJ_G0031753) #32 Mmp3 (MGP_CAROLIEiJ_G0031752) #31 Mmp12 (MGP_CAROLIEiJ_G0031751) #34 Mmp13 (MGP_CAROLIEiJ_G0031750) #35 MGP_CAROLIEiJ_G0031749 #36 Shrew mouse MODERN SPECIES 1 Kdm4d (MGP_PahariEiJ_G0014657) Endod1 (MGP_PahariEiJ_G0014656) Sesn3 (MGP_PahariEiJ_G0014655) Fam76b (MGP_PahariEiJ_G0014654) #8 Cep57 (MGP_PahariEiJ_G0014653) #9 Mtmr2 (MGP_PahariEiJ_G0014652) #10 Maml2 (MGP_PahariEiJ_G0014651) #11 MGP_PahariEiJ_G0014650 Ccdc82 (MGP_PahariEiJ_G0014649) #13 Jrkl (MGP_PahariEiJ_G0014648) #14 MGP_PahariEiJ_G0014647 #16 Arhgap42 (MGP_PahariEiJ_G0014646) #17 Pgr (MGP_PahariEiJ_G0014645) #18 Trpc6 (MGP_PahariEiJ_G0014644) #19 Cep126 (MGP_PahariEiJ_G0014643) #21 Cfap300 (MGP_PahariEiJ_G0014642) #22 Yap1 (MGP_PahariEiJ_G0014641) #23 Birc3 (MGP_PahariEiJ_G0014640) #24 MGP_PahariEiJ_G0014639 Tmem123 (MGP_PahariEiJ_G0014638) #26 Mmp7 (MGP_PahariEiJ_G0014637) #27 Mmp20 (MGP_PahariEiJ_G0014636) #28 Mmp27 (MGP_PahariEiJ_G0014635) #29 Mmp8 (MGP_PahariEiJ_G0014634) #30 Mmp10 (MGP_PahariEiJ_G0014633) #31 Mmp3 (MGP_PahariEiJ_G0014632) #31 Mmp1b (MGP_PahariEiJ_G0014631) #32 Mmp12 (MGP_PahariEiJ_G0014630) #34 Mmp13 (MGP_PahariEiJ_G0014629) #35 MGP_PahariEiJ_G0014628 #36 Dync2h1 (MGP_PahariEiJ_G0014627) #37 Rat MODERN SPECIES 18 Fam76b (ENSRNOG00000024863) #8 Cep57 (ENSRNOG00000006792) #9 Mtmr2 (ENSRNOG00000005923) #10 Maml2 (ENSRNOG00000005879) #11 Ccdc82 (ENSRNOG00000005713) #13 Jrkl (ENSRNOG00000047133) #14 ENSRNOG00000064384 Cntn5 (ENSRNOG00000007038) #16 ENSRNOG00000063507 Arhgap42 (ENSRNOG00000026821) #17 Pgr (ENSRNOG00000006831) #18 Trpc6 (ENSRNOG00000006324) #19 LOC100362400 (ENSRNOG00000032531) ENSRNOG00000062568 Cep126 (ENSRNOG00000021839) #21 Cfap300 (ENSRNOG00000043410) #22 Yap1 (ENSRNOG00000005933) #23 Birc3 (ENSRNOG00000005731) #24 Birc2 (ENSRNOG00000010602) #25 Tmem123 (ENSRNOG00000010584) #26 Mmp7 (ENSRNOG00000010507) #27 Mmp20 (ENSRNOG00000021896) #28 Mmp27 (ENSRNOG00000040208) #29 Mmp8 (ENSRNOG00000009907) #30 Mmp10 (ENSRNOG00000032832) #31 Mmp1 (ENSRNOG00000032353) #32 Mmp3 (ENSRNOG00000032626) #31 Mmp1b (ENSRNOG00000008881) #32 Mmp12 (ENSRNOG00000030187) #34 Mmp13 (ENSRNOG00000008478) #35 Dcun1d5 (ENSRNOG00000008390) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 1450 Cntn5 (ENSNGAG00000013898) #16 Arhgap42 (ENSNGAG00000009398) #17 Pgr (ENSNGAG00000022362) #18 Trpc6 (ENSNGAG00000022909) #19 ENSNGAG00000011061 #21 Cfap300 (ENSNGAG00000006580) #22 ENSNGAG00000011825 #23 ENSNGAG00000003788 #24 Lesser Egyptian jerboa MODERN SPECIES 87 ENSJJAG00000015656 Sesn3 (ENSJJAG00000019262) Fam76b (ENSJJAG00000017450) #8 Cep57 (ENSJJAG00000013938) #9 Mtmr2 (ENSJJAG00000009913) #10 ENSJJAG00000002824 #11 Ccdc82 (ENSJJAG00000017966) #13 Jrkl (ENSJJAG00000000663) #14 ENSJJAG00000007185 ENSJJAG00000000229 Arhgap42 (ENSJJAG00000023474) #17 Pgr (ENSJJAG00000015786) #18 ENSJJAG00000002569 Trpc6 (ENSJJAG00000021679) #19 Cep126 (ENSJJAG00000014011) #21 Cfap300 (ENSJJAG00000022122) #22 ENSJJAG00000015982 ENSJJAG00000010414 #23 ENSJJAG00000021580 #24 ENSJJAG00000017306 #25 Tmem123 (ENSJJAG00000014178) #26 Mmp7 (ENSJJAG00000009326) #27 Mmp20 (ENSJJAG00000020407) #28 Mmp27 (ENSJJAG00000011497) #29 Mmp8 (ENSJJAG00000021566) #30 ENSJJAG00000020496 ENSJJAG00000010013 #32 Mmp12 (ENSJJAG00000019762) #34 Mmp13 (ENSJJAG00000013818) #35 Dcun1d5 (ENSJJAG00000004999) #36 Dync2h1 (ENSJJAG00000000557) #37 Kangaroo rat MODERN SPECIES 329 Ankrd49 (ENSDORG00000013373) ENSDORG00000027168 ENSDORG00000029165 Amotl1 (ENSDORG00000006612) Cwc15 (ENSDORG00000011075) Sesn3 (ENSDORG00000014812) Fam76b (ENSDORG00000004977) #8 Cep57 (ENSDORG00000001032) #9 Mtmr2 (ENSDORG00000001033) #10 Maml2 (ENSDORG00000013901) #11 Ccdc82 (ENSDORG00000016570) #13 Jrkl (ENSDORG00000012234) #14 Arhgap42 (ENSDORG00000014906) #17 Trpc6 (ENSDORG00000005456) #19 Cep126 (ENSDORG00000025333) #21 Cfap300 (ENSDORG00000003243) #22 Yap1 (ENSDORG00000023430) #23 Birc2 (ENSDORG00000010334) #25 Mmp7 (ENSDORG00000001516) #27 Mmp20 (ENSDORG00000015101) #28 Mmp27 (ENSDORG00000015102) #29 Mmp8 (ENSDORG00000015105) #30 Mmp10 (ENSDORG00000015107) #31 ENSDORG00000015112 #32 Mmp3 (ENSDORG00000015114) #31 Mmp12 (ENSDORG00000005305) #34 Mmp13 (ENSDORG00000013795) #35 ENSDORG00000027659 Or8b55 (ENSDORG00000026123) ENSDORG00000030210 ENSDORG00000012306 Lagomorpha ANCESTRAL SPECIES ENSGT00510000047559 #22 Pika MODERN SPECIES 1505 ENSOPRG00000003186 #22 Rabbit MODERN SPECIES ENSOCUG00000037475 ENSOCUG00000036924 CNTN5 (ENSOCUG00000015047) #16 ENSOCUG00000007222 ENSOCUG00000037422 ARHGAP42 (ENSOCUG00000006927) #17 PGR (ENSOCUG00000014693) #18 TRPC6 (ENSOCUG00000017832) #19 ENSOCUG00000024698 ENSOCUG00000026522 ANGPTL5 (ENSOCUG00000029200) #20 CEP126 (ENSOCUG00000000342) #21 ENSOCUG00000035862 ENSOCUG00000034665 ENSOCUG00000033152 CFAP300 (ENSOCUG00000006104) #22 ENSOCUG00000038245 YAP1 (ENSOCUG00000025834) #23 ENSOCUG00000034499 BIRC3 (ENSOCUG00000010109) #24 BIRC2 (ENSOCUG00000013890) #25 ENSOCUG00000006165 #26 MMP7 (ENSOCUG00000015329) #27 MMP20 (ENSOCUG00000002930) #28 MMP27 (ENSOCUG00000001090) #29 MMP8 (ENSOCUG00000001092) #30 MMP10 (ENSOCUG00000021775) MMP1 (ENSOCUG00000017958) #32 MMP3 (ENSOCUG00000029337) #31 MMP12 (ENSOCUG00000008303) #34 ENSOCUG00000011333 Tree shrew MODERN SPECIES 1792 CFAP300 (ENSTBEG00000000897) #22 YAP1 (ENSTBEG00000001222) #23 BIRC3 (ENSTBEG00000001728) #24 BIRC2 (ENSTBEG00000002659) #25 Primates ANCESTRAL SPECIES ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Lemuriformes ANCESTRAL SPECIES 13 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183.m #16 ENSGT00940000155492.b #17 ENSGT00940000159713.d #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Lemuriformes_a ANCESTRAL SPECIES 22 ENSGT00940000158183.m #16 ENSGT00940000155492.b #17 ENSGT00940000159713.d #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Greater bamboo lemur MODERN SPECIES 475 CNTN5 (ENSPSMG00000010213) #16 ENSPSMG00000010065 ARHGAP42 (ENSPSMG00000010056) #17 PGR (ENSPSMG00000010007) #18 ENSPSMG00000009993 TRPC6 (ENSPSMG00000009925) #19 ANGPTL5 (ENSPSMG00000009823) #20 CEP126 (ENSPSMG00000009809) #21 CFAP300 (ENSPSMG00000009802) #22 YAP1 (ENSPSMG00000009653) #23 BIRC3 (ENSPSMG00000009531) #24 BIRC2 (ENSPSMG00000009475) #25 ENSPSMG00000009400 #26 MMP7 (ENSPSMG00000009394) #27 MMP20 (ENSPSMG00000009381) #28 MMP27 (ENSPSMG00000009374) #29 MMP8 (ENSPSMG00000009363) #30 ENSPSMG00000009358 #32 MMP10 (ENSPSMG00000009342) MMP1 (ENSPSMG00000009331) #32 MMP3 (ENSPSMG00000009315) #31 MMP12 (ENSPSMG00000009292) #34 MMP13 (ENSPSMG00000009286) #35 DCUN1D5 (ENSPSMG00000009263) #36 Coquerels sifaka MODERN SPECIES 760 ENSPCOG00000026577 #18 ENSPCOG00000021167 TRPC6 (ENSPCOG00000023495) #19 ANGPTL5 (ENSPCOG00000001825) #20 CEP126 (ENSPCOG00000024276) #21 CFAP300 (ENSPCOG00000001504) #22 YAP1 (ENSPCOG00000017226) #23 BIRC3 (ENSPCOG00000009368) #24 BIRC2 (ENSPCOG00000022626) #25 TMEM123 (ENSPCOG00000005902) #26 MMP7 (ENSPCOG00000027243) #27 MMP20 (ENSPCOG00000015806) #28 MMP27 (ENSPCOG00000024142) #29 MMP8 (ENSPCOG00000003235) #30 MMP10 (ENSPCOG00000017692) MMP1 (ENSPCOG00000022669) #32 MMP3 (ENSPCOG00000023323) #31 MMP12 (ENSPCOG00000015277) #34 MMP13 (ENSPCOG00000028792) #35 DCUN1D5 (ENSPCOG00000004961) #36 ENSPCOG00000027848 #37 Mouse lemur MODERN SPECIES 27 FAM76B (ENSMICG00000036906) #8 CEP57 (ENSMICG00000030559) #9 MTMR2 (ENSMICG00000009395) #10 MAML2 (ENSMICG00000009400) #11 ENSMICG00000031831 #11 CCDC82 (ENSMICG00000009411) #13 JRKL (ENSMICG00000041876) #14 ENSMICG00000029672 ENSMICG00000031298 #16 ENSMICG00000015969 #16 ARHGAP42 (ENSMICG00000010758) #17 PGR (ENSMICG00000006331) #18 TRPC6 (ENSMICG00000010349) #19 ANGPTL5 (ENSMICG00000031686) #20 CEP126 (ENSMICG00000009111) #21 CFAP300 (ENSMICG00000017739) #22 YAP1 (ENSMICG00000031456) #23 BIRC3 (ENSMICG00000002746) #24 ENSMICG00000044293 ENSMICG00000016656 #26 MMP7 (ENSMICG00000002935) #27 MMP20 (ENSMICG00000002940) #28 MMP27 (ENSMICG00000036959) #29 MMP8 (ENSMICG00000014462) #30 MMP10 (ENSMICG00000006282) MMP1 (ENSMICG00000006291) #32 MMP3 (ENSMICG00000006301) #31 MMP12 (ENSMICG00000006319) #34 MMP13 (ENSMICG00000006323) #35 DCUN1D5 (ENSMICG00000006329) #36 DYNC2H1 (ENSMICG00000029576) #37 Bushbaby MODERN SPECIES 116 MAML2 (ENSOGAG00000000360) #11 ENSOGAG00000024191 CCDC82 (ENSOGAG00000007288) #13 JRKL (ENSOGAG00000029206) #14 ENSOGAG00000033517 ENSOGAG00000027962 CNTN5 (ENSOGAG00000004704) #16 ENSOGAG00000029060 ARHGAP42 (ENSOGAG00000012302) #17 PGR (ENSOGAG00000012310) #18 TRPC6 (ENSOGAG00000000765) #19 ANGPTL5 (ENSOGAG00000009855) #20 CEP126 (ENSOGAG00000009858) #21 ENSOGAG00000030803 ENSOGAG00000028332 CFAP300 (ENSOGAG00000024314) #22 YAP1 (ENSOGAG00000002885) #23 ENSOGAG00000026633 BIRC3 (ENSOGAG00000005946) #24 ENSOGAG00000010377 #25 ENSOGAG00000028751 #26 MMP7 (ENSOGAG00000024291) #27 MMP20 (ENSOGAG00000015247) #28 MMP27 (ENSOGAG00000015250) #29 MMP8 (ENSOGAG00000015256) #30 MMP10 (ENSOGAG00000010212) MMP1 (ENSOGAG00000010215) #32 MMP3 (ENSOGAG00000010220) #31 MMP12 (ENSOGAG00000010221) #34 MMP13 (ENSOGAG00000010224) #35 DCUN1D5 (ENSOGAG00000010225) #36 Haplorrhini ANCESTRAL SPECIES ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Tarsier MODERN SPECIES 1149 CUNH11orf70 (ENSTSYG00000000616) #22 Simiiformes ANCESTRAL SPECIES ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00390000010045.g.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000000537.e ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Platyrrhini ANCESTRAL SPECIES 3 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00390000010045.g.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000000537.e ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Cebidae ANCESTRAL SPECIES ENSGT00910000147059 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000000537.e ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Cebidae_a ANCESTRAL SPECIES 22 ENSGT01030000234592.B ENSGT00910000147059 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000000537.e.b ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Capuchin MODERN SPECIES 79 ANGPTL5 (ENSCCAG00000026522) #20 CEP126 (ENSCCAG00000033127) #21 CFAP300 (ENSCCAG00000033252) #22 YAP1 (ENSCCAG00000035003) #23 BIRC3 (ENSCCAG00000026847) #24 ENSCCAG00000036738 ENSCCAG00000034552 ENSCCAG00000037949 ENSCCAG00000037522 ENSCCAG00000008865 PAK1 (ENSCCAG00000027918) GDPD4 (ENSCCAG00000025757) MYO7A (ENSCCAG00000035696) CAPN5 (ENSCCAG00000032879) ACER3 (ENSCCAG00000022320) LRRC32 (ENSCCAG00000036797) EMSY (ENSCCAG00000033043) GVQW3 (ENSCCAG00000017675) Bolivian squirrel monkey MODERN SPECIES 50 CEP57 (ENSSBOG00000030610) #9 MTMR2 (ENSSBOG00000012973) #10 MAML2 (ENSSBOG00000031458) #11 CCDC82 (ENSSBOG00000027897) #13 ENSSBOG00000018311 CNTN5 (ENSSBOG00000023228) #16 ARHGAP42 (ENSSBOG00000035822) #17 PGR (ENSSBOG00000013714) #18 ENSSBOG00000023277 ENSSBOG00000023108 ENSSBOG00000021319 TRPC6 (ENSSBOG00000019836) #19 ENSSBOG00000032893 ANGPTL5 (ENSSBOG00000031015) #20 CEP126 (ENSSBOG00000028647) #21 CFAP300 (ENSSBOG00000033758) #22 ENSSBOG00000036077 YAP1 (ENSSBOG00000027497) #23 BIRC3 (ENSSBOG00000031187) #24 BIRC2 (ENSSBOG00000034069) #25 ENSSBOG00000029913 #26 MMP7 (ENSSBOG00000026550) #27 MMP20 (ENSSBOG00000023588) #28 MMP27 (ENSSBOG00000003176) #29 MMP8 (ENSSBOG00000031477) #30 MMP10 (ENSSBOG00000029788) MMP1 (ENSSBOG00000034105) #32 MMP3 (ENSSBOG00000033146) #31 MMP12 (ENSSBOG00000028385) #34 MMP13 (ENSSBOG00000035950) #35 ENSSBOG00000033947 #36 Marmoset MODERN SPECIES 2 ENSCJAG00000074342 ENSCJAG00000023377 ENSCJAG00000073640 ENSCJAG00000068576 ENSCJAG00000078589 CNTN5 (ENSCJAG00000000543) #16 ENSCJAG00000073241 ENSCJAG00000023196 ARHGAP42 (ENSCJAG00000000566) #17 PGR (ENSCJAG00000000583) #18 ENSCJAG00000058230 TRPC6 (ENSCJAG00000000595) #19 ENSCJAG00000082031 ANGPTL5 (ENSCJAG00000000619) #20 CEP126 (ENSCJAG00000000621) #21 CFAP300 (ENSCJAG00000000623) #22 YAP1 (ENSCJAG00000000627) #23 ENSCJAG00000083338 BIRC3 (ENSCJAG00000000654) #24 ENSCJAG00000082333 ENSCJAG00000084008 ENSCJAG00000071784 ENSCJAG00000071356 ENSCJAG00000070489 ENSCJAG00000064771 B3GAT1 (ENSCJAG00000007744) GLB1L3 (ENSCJAG00000045554) ENSCJAG00000080715 ENSCJAG00000078525 ENSCJAG00000079276 ENSCJAG00000073290 Mas night monkey MODERN SPECIES 278 ENSANAG00000031662 SESN3 (ENSANAG00000032229) FAM76B (ENSANAG00000027519) #8 CEP57 (ENSANAG00000033666) #9 MTMR2 (ENSANAG00000028178) #10 MAML2 (ENSANAG00000022462) #11 CCDC82 (ENSANAG00000025591) #13 ENSANAG00000022382 CNTN5 (ENSANAG00000024170) #16 ENSANAG00000026824 ARHGAP42 (ENSANAG00000033530) #17 PGR (ENSANAG00000036519) #18 TRPC6 (ENSANAG00000032595) #19 ANGPTL5 (ENSANAG00000025830) #20 CEP126 (ENSANAG00000033095) #21 CFAP300 (ENSANAG00000023658) #22 YAP1 (ENSANAG00000029463) #23 ENSANAG00000022618 BIRC3 (ENSANAG00000035989) #24 BIRC2 (ENSANAG00000037030) #25 TMEM123 (ENSANAG00000029026) #26 MMP7 (ENSANAG00000023347) #27 MMP20 (ENSANAG00000021702) #28 MMP27 (ENSANAG00000020509) #29 MMP8 (ENSANAG00000023440) #30 MMP3 (ENSANAG00000029899) #31 MMP1 (ENSANAG00000028859) #32 ENSANAG00000004878 MMP12 (ENSANAG00000022445) #34 MMP13 (ENSANAG00000020799) #35 DCUN1D5 (ENSANAG00000034204) #36 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00390000010045.g.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000000537.e ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 Hominoidea ANCESTRAL SPECIES 1 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00390000009026 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00390000000537.e ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Gibbon MODERN SPECIES 5 MTMR2 (ENSNLEG00000007138) #10 ENSNLEG00000033879 #11 ENSNLEG00000030751 #11 CCDC82 (ENSNLEG00000007144) #13 JRKL (ENSNLEG00000007145) #14 ENSNLEG00000007146 ENSNLEG00000034421 CNTN5 (ENSNLEG00000007147) #16 ARHGAP42 (ENSNLEG00000007152) #17 ENSNLEG00000033273 ENSNLEG00000007154 #18 TRPC6 (ENSNLEG00000007157) #19 ENSNLEG00000027844 ANGPTL5 (ENSNLEG00000007159) #20 CEP126 (ENSNLEG00000007160) #21 CFAP300 (ENSNLEG00000007163) #22 YAP1 (ENSNLEG00000007164) #23 ENSNLEG00000033031 BIRC3 (ENSNLEG00000007165) #24 BIRC2 (ENSNLEG00000031093) #25 TMEM123 (ENSNLEG00000007167) #26 MMP7 (ENSNLEG00000007168) #27 MMP20 (ENSNLEG00000007169) #28 MMP27 (ENSNLEG00000007170) #29 ENSNLEG00000028184 #30 MMP10 (ENSNLEG00000007177) MMP1 (ENSNLEG00000007171) #32 MMP3 (ENSNLEG00000007178) #31 MMP12 (ENSNLEG00000007183) #34 MMP13 (ENSNLEG00000007186) #35 DCUN1D5 (ENSNLEG00000007189) #36 Hominidae ANCESTRAL SPECIES 1 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00950000183087.A.a.b.b.g.e.b.a.a.a ENSGT00940000155492.b #17 ENSGT00390000009026 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000162748.g ENSGT00940000158183 #16 ENSGT00950000183087.A.a.b.b.g.e.b.a.a.a ENSGT00940000155492.b.c #17 ENSGT00390000009026 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000162748.g ENSGT00940000158183 #16 ENSGT00950000183087.A.a.b.b.g.e.b.a.a.a ENSGT00940000155492.b.c #17 ENSGT00390000009026 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Pan ANCESTRAL SPECIES 1 ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000162748.g ENSGT00940000158183 #16 ENSGT00950000183087.A.a.b.b.g.e.b.a.a.a ENSGT00940000155492.b.c #17 ENSGT00390000009026 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Bonobo MODERN SPECIES 2 FAM76B (ENSPPAG00000033075) #8 ENSPPAG00000024555 #9 MTMR2 (ENSPPAG00000042525) #10 MAML2 (ENSPPAG00000033930) #11 CCDC82 (ENSPPAG00000021732) #13 JRKL (ENSPPAG00000025455) #14 ENSPPAG00000023621 ENSPPAG00000043290 CNTN5 (ENSPPAG00000003968) #16 ARHGAP42 (ENSPPAG00000043081) #17 ENSPPAG00000007168 ENSPPAG00000028196 #18 TRPC6 (ENSPPAG00000028562) #19 ANGPTL5 (ENSPPAG00000026385) #20 CEP126 (ENSPPAG00000005466) #21 CFAP300 (ENSPPAG00000038653) #22 YAP1 (ENSPPAG00000042951) #23 BIRC3 (ENSPPAG00000029649) #24 BIRC2 (ENSPPAG00000004061) #25 TMEM123 (ENSPPAG00000040642) #26 MMP7 (ENSPPAG00000033482) #27 MMP20 (ENSPPAG00000007692) #28 MMP27 (ENSPPAG00000030100) #29 MMP8 (ENSPPAG00000029244) #30 MMP10 (ENSPPAG00000019189) MMP1 (ENSPPAG00000040747) #32 ENSPPAG00000031769 MMP3 (ENSPPAG00000036174) #31 MMP12 (ENSPPAG00000007778) #34 MMP13 (ENSPPAG00000028323) #35 DCUN1D5 (ENSPPAG00000030025) #36 Chimpanzee MODERN SPECIES 2 CEP57 (ENSPTRG00000004194) #9 MTMR2 (ENSPTRG00000004195) #10 MAML2 (ENSPTRG00000004196) #11 CCDC82 (ENSPTRG00000004198) #13 JRKL (ENSPTRG00000028419) #14 ENSPTRG00000051433 CNTN5 (ENSPTRG00000004201) #16 ENSPTRG00000045366 ARHGAP42 (ENSPTRG00000004204) #17 ENSPTRG00000039214 ENSPTRG00000048308 PGR (ENSPTRG00000004206) #18 TRPC6 (ENSPTRG00000004207) #19 ANGPTL5 (ENSPTRG00000004208) #20 CEP126 (ENSPTRG00000004209) #21 CFAP300 (ENSPTRG00000004210) #22 YAP1 (ENSPTRG00000004211) #23 BIRC3 (ENSPTRG00000004212) #24 BIRC2 (ENSPTRG00000004213) #25 TMEM123 (ENSPTRG00000022738) #26 MMP7 (ENSPTRG00000004215) #27 MMP20 (ENSPTRG00000004216) #28 MMP27 (ENSPTRG00000004217) #29 MMP8 (ENSPTRG00000004218) #30 MMP10 (ENSPTRG00000004219) MMP1 (ENSPTRG00000023318) #32 ENSPTRG00000043621 MMP3 (ENSPTRG00000004220) #31 MMP12 (ENSPTRG00000048755) #34 MMP13 (ENSPTRG00000004222) #35 DCUN1D5 (ENSPTRG00000004223) #36 Human MODERN SPECIES 2 SRSF8 (ENSG00000263465) ENDOD1 (ENSG00000149218) SESN3 (ENSG00000149212) FAM76B (ENSG00000077458) #8 CEP57 (ENSG00000166037) #9 MTMR2 (ENSG00000087053) #10 MAML2 (ENSG00000184384) #11 CCDC82 (ENSG00000149231) #13 JRKL (ENSG00000183340) #14 CNTN5 (ENSG00000149972) #16 ARHGAP42 (ENSG00000165895) #17 PGR (ENSG00000082175) #18 TRPC6 (ENSG00000137672) #19 ANGPTL5 (ENSG00000187151) #20 CEP126 (ENSG00000110318) #21 CFAP300 (ENSG00000137691) #22 YAP1 (ENSG00000137693) #23 BIRC3 (ENSG00000023445) #24 BIRC2 (ENSG00000110330) #25 TMEM123 (ENSG00000152558) #26 MMP7 (ENSG00000137673) #27 MMP20 (ENSG00000137674) #28 MMP27 (ENSG00000137675) #29 MMP8 (ENSG00000118113) #30 MMP10 (ENSG00000166670) MMP1 (ENSG00000196611) #32 MMP3 (ENSG00000149968) #31 MMP12 (ENSG00000262406) #34 MMP13 (ENSG00000137745) #35 DCUN1D5 (ENSG00000137692) #36 DYNC2H1 (ENSG00000187240) #37 Gorilla MODERN SPECIES 2 ENDOD1 (ENSGGOG00000024775) SESN3 (ENSGGOG00000004922) FAM76B (ENSGGOG00000013409) #8 CEP57 (ENSGGOG00000013416) #9 MTMR2 (ENSGGOG00000010339) #10 MAML2 (ENSGGOG00000024120) #11 CCDC82 (ENSGGOG00000016752) #13 JRKL (ENSGGOG00000000360) #14 ENSGGOG00000025493 CNTN5 (ENSGGOG00000016800) #16 ARHGAP42 (ENSGGOG00000011397) #17 PGR (ENSGGOG00000016358) #18 TRPC6 (ENSGGOG00000009198) #19 ANGPTL5 (ENSGGOG00000008463) #20 CEP126 (ENSGGOG00000004641) #21 CFAP300 (ENSGGOG00000000989) #22 ENSGGOG00000005796 #23 BIRC3 (ENSGGOG00000005827) #24 BIRC2 (ENSGGOG00000008327) #25 TMEM123 (ENSGGOG00000008331) #26 ENSGGOG00000015908 #27 MMP20 (ENSGGOG00000003314) #28 MMP27 (ENSGGOG00000008717) #29 MMP8 (ENSGGOG00000008722) #30 MMP10 (ENSGGOG00000026738) MMP1 (ENSGGOG00000008869) #32 ENSGGOG00000037629 MMP3 (ENSGGOG00000010315) #31 MMP12 (ENSGGOG00000015496) #34 MMP13 (ENSGGOG00000003490) #35 DCUN1D5 (ENSGGOG00000028011) #36 Orangutan MODERN SPECIES 2 ENDOD1 (ENSPPYG00000040533) SESN3 (ENSPPYG00000003788) FAM76B (ENSPPYG00000003789) #8 CEP57 (ENSPPYG00000003790) #9 MTMR2 (ENSPPYG00000003792) #10 MAML2 (ENSPPYG00000003793) #11 CCDC82 (ENSPPYG00000003795) #13 JRKL (ENSPPYG00000003796) #14 CNTN5 (ENSPPYG00000003797) #16 ENSPPYG00000041195 ARHGAP42 (ENSPPYG00000003799) #17 PGR (ENSPPYG00000003801) #18 TRPC6 (ENSPPYG00000003802) #19 ANGPTL5 (ENSPPYG00000003803) #20 CEP126 (ENSPPYG00000003804) #21 ENSPPYG00000003805 #22 YAP1 (ENSPPYG00000003806) #23 BIRC3 (ENSPPYG00000034604) #24 BIRC2 (ENSPPYG00000003808) #25 TMEM123 (ENSPPYG00000003809) #26 MMP7 (ENSPPYG00000003810) #27 MMP20 (ENSPPYG00000003811) #28 MMP27 (ENSPPYG00000037566) #29 MMP8 (ENSPPYG00000003812) #30 ENSPPYG00000033588 MMP10 (ENSPPYG00000032892) MMP1 (ENSPPYG00000003813) #32 MMP3 (ENSPPYG00000003814) #31 MMP12 (ENSPPYG00000034070) #34 MMP13 (ENSPPYG00000003815) #35 DCUN1D5 (ENSPPYG00000003816) #36 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00390000010045.g.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 Rhinopithecus ANCESTRAL SPECIES 347 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Golden snub-nosed monkey MODERN SPECIES 2119 CFAP300 (ENSRROG00000030852) #22 YAP1 (ENSRROG00000033903) #23 BIRC3 (ENSRROG00000039472) #24 BIRC2 (ENSRROG00000039789) #25 TMEM123 (ENSRROG00000035161) #26 MMP7 (ENSRROG00000044514) #27 MMP20 (ENSRROG00000038564) #28 MMP27 (ENSRROG00000008615) #29 MMP8 (ENSRROG00000037624) #30 MMP10 (ENSRROG00000042454) MMP1 (ENSRROG00000030668) #32 MMP3 (ENSRROG00000043417) #31 MMP12 (ENSRROG00000033367) #34 MMP13 (ENSRROG00000042337) #35 DCUN1D5 (ENSRROG00000033290) #36 DYNC2H1 (ENSRROG00000029529) #37 Black snub-nosed monkey MODERN SPECIES 1497 CFAP300 (ENSRBIG00000043051) #22 YAP1 (ENSRBIG00000036436) #23 BIRC3 (ENSRBIG00000017780) #24 BIRC2 (ENSRBIG00000029682) #25 TMEM123 (ENSRBIG00000002017) #26 MMP7 (ENSRBIG00000036156) #27 MMP20 (ENSRBIG00000033578) #28 MMP27 (ENSRBIG00000039707) #29 MMP8 (ENSRBIG00000036384) #30 MMP10 (ENSRBIG00000027869) MMP1 (ENSRBIG00000028827) #32 MMP3 (ENSRBIG00000018235) #31 MMP12 (ENSRBIG00000032255) #34 MMP13 (ENSRBIG00000038724) #35 DCUN1D5 (ENSRBIG00000038043) #36 DYNC2H1 (ENSRBIG00000039808) #37 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00390000010045.g.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 Vervet Monkey MODERN SPECIES ENDOD1 (ENSCSAG00000003290) SESN3 (ENSCSAG00000003288) FAM76B (ENSCSAG00000003286) #8 CEP57 (ENSCSAG00000003283) #9 MTMR2 (ENSCSAG00000003280) #10 MAML2 (ENSCSAG00000003277) #11 CCDC82 (ENSCSAG00000003276) #13 JRKL (ENSCSAG00000000606) #14 CNTN5 (ENSCSAG00000003274) #16 ENSCSAG00000003271 ARHGAP42 (ENSCSAG00000003267) #17 PGR (ENSCSAG00000003260) #18 TRPC6 (ENSCSAG00000003254) #19 ANGPTL5 (ENSCSAG00000003234) #20 CEP126 (ENSCSAG00000003230) #21 CFAP300 (ENSCSAG00000003227) #22 YAP1 (ENSCSAG00000003224) #23 BIRC3 (ENSCSAG00000003222) #24 TMEM123 (ENSCSAG00000003220) #26 MMP7 (ENSCSAG00000003219) #27 MMP20 (ENSCSAG00000003216) #28 ENSCSAG00000000605 MMP27 (ENSCSAG00000003213) #29 MMP8 (ENSCSAG00000003209) #30 MMP10 (ENSCSAG00000003203) MMP1 (ENSCSAG00000003198) #32 MMP3 (ENSCSAG00000003190) #31 MMP12 (ENSCSAG00000003188) #34 MMP13 (ENSCSAG00000003185) #35 DCUN1D5 (ENSCSAG00000003173) #36 DYNC2H1 (ENSCSAG00000003153) #37 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00860000135858 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00390000010045.g.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 Cercopithecinae_b ANCESTRAL SPECIES 21 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00860000135858 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00390000010045.g.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 Cercopithecinae_d ANCESTRAL SPECIES 45 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00860000135858 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00390000010045.g.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000171202 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 Drill MODERN SPECIES 895 ARHGAP42 (ENSMLEG00000014784) #17 PGR (ENSMLEG00000028595) #18 TRPC6 (ENSMLEG00000037809) #19 ANGPTL5 (ENSMLEG00000011294) #20 CEP126 (ENSMLEG00000032349) #21 CFAP300 (ENSMLEG00000034508) #22 YAP1 (ENSMLEG00000041493) #23 BIRC3 (ENSMLEG00000041716) #24 BIRC2 (ENSMLEG00000035461) #25 ENSMLEG00000035112 TMEM123 (ENSMLEG00000034191) #26 MMP7 (ENSMLEG00000031118) #27 MMP20 (ENSMLEG00000030794) #28 MMP27 (ENSMLEG00000031462) #29 MMP8 (ENSMLEG00000042565) #30 MMP10 (ENSMLEG00000031529) MMP1 (ENSMLEG00000041475) #32 ENSMLEG00000032101 MMP3 (ENSMLEG00000043132) #31 MMP12 (ENSMLEG00000031646) #34 MMP13 (ENSMLEG00000033536) #35 Sooty mangabey MODERN SPECIES 172 SESN3 (ENSCATG00000039763) FAM76B (ENSCATG00000014922) #8 CEP57 (ENSCATG00000034084) #9 MTMR2 (ENSCATG00000032336) #10 MAML2 (ENSCATG00000034406) #11 CCDC82 (ENSCATG00000021333) #13 ENSCATG00000037010 JRKL (ENSCATG00000016525) #14 CNTN5 (ENSCATG00000036648) #16 ENSCATG00000033474 ARHGAP42 (ENSCATG00000038167) #17 PGR (ENSCATG00000029370) #18 TRPC6 (ENSCATG00000034519) #19 ANGPTL5 (ENSCATG00000042360) #20 CEP126 (ENSCATG00000028236) #21 CFAP300 (ENSCATG00000039694) #22 YAP1 (ENSCATG00000035423) #23 BIRC3 (ENSCATG00000025833) #24 BIRC2 (ENSCATG00000039366) #25 ENSCATG00000034848 TMEM123 (ENSCATG00000041958) #26 Macaca ANCESTRAL SPECIES 2 ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00860000135858 ENSGT00940000161513 #14 ENSGT00390000010045.g.a ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Pig-tailed macaque MODERN SPECIES 204 CEP126 (ENSMNEG00000041461) #21 CFAP300 (ENSMNEG00000038673) #22 YAP1 (ENSMNEG00000032086) #23 BIRC3 (ENSMNEG00000040332) #24 BIRC2 (ENSMNEG00000038024) #25 TMEM123 (ENSMNEG00000040184) #26 MMP7 (ENSMNEG00000040439) #27 MMP20 (ENSMNEG00000020408) #28 MMP27 (ENSMNEG00000041633) #29 MMP8 (ENSMNEG00000031542) #30 MMP10 (ENSMNEG00000026876) MMP1 (ENSMNEG00000034618) #32 MMP3 (ENSMNEG00000043414) #31 MMP12 (ENSMNEG00000040391) #34 MMP13 (ENSMNEG00000037655) #35 DCUN1D5 (ENSMNEG00000029266) #36 DYNC2H1 (ENSMNEG00000042907) #37 Macaca_a ANCESTRAL SPECIES 3 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00860000135858 ENSGT00940000161513 #14 ENSGT00390000015405.s.d ENSGT01100000263493.a.b.a.a.b.b.b.b.a.b.a.a ENSGT01100000263493.a.b.a.b.b.b.a.a.a.a.b.b.a ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Rhesus MODERN SPECIES 5 ENSMMUG00000056501 JRKL (ENSMMUG00000003821) #14 ENSMMUG00000058706 ENSMMUG00000038443 ENSMMUG00000052417 ENSMMUG00000060458 ENSMMUG00000061185 CNTN5 (ENSMMUG00000016737) #16 ENSMMUG00000057177 ARHGAP42 (ENSMMUG00000022603) #17 ENSMMUG00000059891 PGR (ENSMMUG00000011846) #18 TRPC6 (ENSMMUG00000011835) #19 ANGPTL5 (ENSMMUG00000020783) #20 CEP126 (ENSMMUG00000020784) #21 CFAP300 (ENSMMUG00000003394) #22 YAP1 (ENSMMUG00000003396) #23 BIRC3 (ENSMMUG00000058594) #24 BIRC2 (ENSMMUG00000003400) #25 TMEM123 (ENSMMUG00000003403) #26 MMP7 (ENSMMUG00000003405) #27 MMP20 (ENSMMUG00000011013) #28 MMP27 (ENSMMUG00000011015) #29 ENSMMUG00000053278 MMP8 (ENSMMUG00000004489) #30 MMP10 (ENSMMUG00000021764) MMP1 (ENSMMUG00000002037) #32 MMP3 (ENSMMUG00000004249) #31 MMP12 (ENSMMUG00000004250) #34 MMP13 (ENSMMUG00000004253) #35 DCUN1D5 (ENSMMUG00000007008) #36 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Eulipotyphla ANCESTRAL SPECIES 349 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 Hedgehog MODERN SPECIES 3499 CFAP300 (ENSEEUG00000010957) #22 YAP1 (ENSEEUG00000011028) #23 Common shrew MODERN SPECIES 11507 CFAP300 (ENSSARG00000012881) #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Suina ANCESTRAL SPECIES 5 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT01070000257273 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Pig MODERN SPECIES 17 MTMR2 (ENSSSCG00000014970) #10 ENSSSCG00000056982 MAML2 (ENSSSCG00000034879) #11 ENSSSCG00000042256 CCDC82 (ENSSSCG00000014972) #13 JRKL (ENSSSCG00000034924) #14 ENSSSCG00000055851 ENSSSCG00000054749 CNTN5 (ENSSSCG00000014975) #16 ARHGAP42 (ENSSSCG00000014976) #17 PGR (ENSSSCG00000014977) #18 TRPC6 (ENSSSCG00000024022) #19 ENSSSCG00000061774 ANGPTL5 (ENSSSCG00000014978) #20 CEP126 (ENSSSCG00000014979) #21 CFAP300 (ENSSSCG00000014980) #22 YAP1 (ENSSSCG00000031429) #23 BIRC3 (ENSSSCG00000027529) #24 BIRC2 (ENSSSCG00000063374) #25 ENSSSCG00000031170 #26 MMP7 (ENSSSCG00000014982) #27 MMP20 (ENSSSCG00000014983) #28 MMP27 (ENSSSCG00000014984) #29 MMP8 (ENSSSCG00000029675) #30 MMP1 (ENSSSCG00000014985) #32 MMP3 (ENSSSCG00000059078) #31 MMP12 (ENSSSCG00000014987) #34 MMP13 (ENSSSCG00000014988) #35 ENSSSCG00000035427 DCUN1D5 (ENSSSCG00000014989) #36 DYNC2H1 (ENSSSCG00000033937) #37 Chacoan peccary MODERN SPECIES 29 ENSCWAG00000001561 CNTN5 (ENSCWAG00000001327) #16 ARHGAP42 (ENSCWAG00000001167) #17 PGR (ENSCWAG00000001045) #18 TRPC6 (ENSCWAG00000000648) #19 ENSCWAG00000000601 ANGPTL5 (ENSCWAG00000000586) #20 CEP126 (ENSCWAG00000000557) #21 CFAP300 (ENSCWAG00000000530) #22 YAP1 (ENSCWAG00000000439) #23 BIRC3 (ENSCWAG00000000395) #24 BIRC2 (ENSCWAG00000000357) #25 ENSCWAG00000000343 TMEM123 (ENSCWAG00000000329) #26 MMP7 (ENSCWAG00000000312) #27 MMP20 (ENSCWAG00000000288) #28 MMP27 (ENSCWAG00000000250) #29 MMP8 (ENSCWAG00000000204) #30 ENSCWAG00000000098 #32 MMP1 (ENSCWAG00000009665) #32 MMP3 (ENSCWAG00000009566) #31 MMP12 (ENSCWAG00000009480) #34 MMP13 (ENSCWAG00000009364) #35 DCUN1D5 (ENSCWAG00000009255) #36 Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Cetacea ANCESTRAL SPECIES 4 ENSGT00940000162152.n.a ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00950000182999.a.b ENSGT00940000159575 Odontoceti ANCESTRAL SPECIES 4 ENSGT00940000162152.n.a ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00950000182999.a.b ENSGT00940000159575 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00940000162152.n.a ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00950000182999.a.b Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000162152.n.a.b ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00390000015164.v.a.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00950000182999.a.b Monodontidae ANCESTRAL SPECIES 2 ENSGT00940000162152.n.a.b ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00390000015164.v.a.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT01010000222906.b.b.b Narwhal MODERN SPECIES 314 ENSMMNG00015019662 ENDOD1 (ENSMMNG00015019650) SESN3 (ENSMMNG00015019600) FAM76B (ENSMMNG00015019558) #8 CEP57 (ENSMMNG00015019470) #9 MTMR2 (ENSMMNG00015019396) #10 MAML2 (ENSMMNG00015019358) #11 CCDC82 (ENSMMNG00015019297) #13 JRKL (ENSMMNG00015019272) #14 CNTN5 (ENSMMNG00015018995) #16 ARHGAP42 (ENSMMNG00015018844) #17 PGR (ENSMMNG00015018676) #18 TRPC6 (ENSMMNG00015018388) #19 ANGPTL5 (ENSMMNG00015018291) #20 CEP126 (ENSMMNG00015018271) #21 CFAP300 (ENSMMNG00015018205) #22 YAP1 (ENSMMNG00015018068) #23 BIRC3 (ENSMMNG00015017985) #24 BIRC2 (ENSMMNG00015017921) #25 ENSMMNG00015017889 TMEM123 (ENSMMNG00015017867) #26 MMP7 (ENSMMNG00015017833) #27 ENSMMNG00015017789 ENSMMNG00015017752 FOLH1 (ENSMMNG00015016426) MMP20 (ENSMMNG00015016079) #28 MMP27 (ENSMMNG00015016013) #29 MMP8 (ENSMMNG00015015954) #30 MMP1 (ENSMMNG00015015906) #32 MMP3 (ENSMMNG00015015864) #31 MMP13 (ENSMMNG00015015808) #35 Beluga whale MODERN SPECIES 87 CEP57 (ENSDLEG00000008152) #9 MTMR2 (ENSDLEG00000008099) #10 ENSDLEG00000019364 #11 ENSDLEG00000019362 #11 CCDC82 (ENSDLEG00000019354) #13 JRKL (ENSDLEG00000019346) #14 ENSDLEG00000019332 ENSDLEG00000019330 #16 ENSDLEG00000019322 #16 ARHGAP42 (ENSDLEG00000019294) #17 PGR (ENSDLEG00000019262) #18 ENSDLEG00000019251 TRPC6 (ENSDLEG00000019215) #19 ANGPTL5 (ENSDLEG00000019199) #20 CEP126 (ENSDLEG00000019156) #21 CFAP300 (ENSDLEG00000019141) #22 YAP1 (ENSDLEG00000019132) #23 BIRC3 (ENSDLEG00000019114) #24 BIRC2 (ENSDLEG00000019103) #25 ENSDLEG00000019096 ENSDLEG00000019092 #26 MMP7 (ENSDLEG00000019069) #27 Vaquita MODERN SPECIES 19 ENDOD1 (ENSPSNG00000012066) SESN3 (ENSPSNG00000011827) FAM76B (ENSPSNG00000011736) #8 CEP57 (ENSPSNG00000011486) #9 ENSPSNG00000011365 #10 MAML2 (ENSPSNG00000011258) #11 CCDC82 (ENSPSNG00000011116) #13 JRKL (ENSPSNG00000011075) #14 CNTN5 (ENSPSNG00000010146) #16 ARHGAP42 (ENSPSNG00000009766) #17 PGR (ENSPSNG00000014472) #18 ENSPSNG00000014410 TRPC6 (ENSPSNG00000014185) #19 ANGPTL5 (ENSPSNG00000014015) #20 CEP126 (ENSPSNG00000013968) #21 CFAP300 (ENSPSNG00000013652) #22 YAP1 (ENSPSNG00000013360) #23 BIRC3 (ENSPSNG00000013270) #24 BIRC2 (ENSPSNG00000013192) #25 ENSPSNG00000013115 TMEM123 (ENSPSNG00000013055) #26 MMP7 (ENSPSNG00000012937) #27 ENSPSNG00000012887 ENSPSNG00000012854 ENSPSNG00000012784 ENSPSNG00000012743 FOLH1 (ENSPSNG00000012683) ENSPSNG00000012601 ENSPSNG00000012185 ENSPSNG00000012055 ENSPSNG00000012017 Dolphin MODERN SPECIES 553 CFAP300 (ENSTTRG00000011659) #22 YAP1 (ENSTTRG00000011670) #23 Sperm whale MODERN SPECIES 7 ENSPCTG00005011830 SESN3 (ENSPCTG00005011709) FAM76B (ENSPCTG00005011532) #8 CEP57 (ENSPCTG00005011292) #9 MTMR2 (ENSPCTG00005011244) #10 MAML2 (ENSPCTG00005011167) #11 CCDC82 (ENSPCTG00005011035) #13 JRKL (ENSPCTG00005011023) #14 CNTN5 (ENSPCTG00005010190) #16 ARHGAP42 (ENSPCTG00005009957) #17 PGR (ENSPCTG00005009652) #18 ENSPCTG00005009589 TRPC6 (ENSPCTG00005008688) #19 ANGPTL5 (ENSPCTG00005008552) #20 CEP126 (ENSPCTG00005008482) #21 CFAP300 (ENSPCTG00005008410) #22 YAP1 (ENSPCTG00005008267) #23 BIRC3 (ENSPCTG00005008131) #25 TMEM123 (ENSPCTG00005008095) #26 ENSPCTG00005008079 MMP7 (ENSPCTG00005008052) #27 ENSPCTG00005008033 MMP20 (ENSPCTG00005007995) #28 MMP27 (ENSPCTG00005007950) #29 MMP8 (ENSPCTG00005007904) #30 MMP1 (ENSPCTG00005007864) #32 MMP3 (ENSPCTG00005007829) #31 MMP13 (ENSPCTG00005007790) #35 DCUN1D5 (ENSPCTG00005007734) #36 DYNC2H1 (ENSPCTG00005007602) #37 DDI1 (ENSPCTG00005007507) Blue whale MODERN SPECIES 19 SESN3 (ENSBMSG00010007953) FAM76B (ENSBMSG00010007931) #8 CEP57 (ENSBMSG00010007898) #9 MTMR2 (ENSBMSG00010007830) #10 MAML2 (ENSBMSG00010007807) #11 CCDC82 (ENSBMSG00010007784) #13 JRKL (ENSBMSG00010007778) #14 ENSBMSG00010007767 ENSBMSG00010007759 CNTN5 (ENSBMSG00010007654) #16 ARHGAP42 (ENSBMSG00010007547) #17 PGR (ENSBMSG00010007436) #18 TRPC6 (ENSBMSG00010007259) #19 ANGPTL5 (ENSBMSG00010007219) #20 CEP126 (ENSBMSG00010007195) #21 CFAP300 (ENSBMSG00010007148) #22 YAP1 (ENSBMSG00010007087) #23 BIRC3 (ENSBMSG00010007044) #24 BIRC2 (ENSBMSG00010007026) #25 ENSBMSG00010006981 #26 MMP7 (ENSBMSG00010006965) #27 ENSBMSG00010006936 MMP20 (ENSBMSG00010006883) #28 MMP27 (ENSBMSG00010006850) #29 MMP8 (ENSBMSG00010006829) #30 MMP1 (ENSBMSG00010006797) #32 MMP3 (ENSBMSG00010006771) #31 MMP13 (ENSBMSG00010006744) #35 DCUN1D5 (ENSBMSG00010006711) #36 ENSBMSG00010006692 DYNC2H1 (ENSBMSG00010006610) #37 Pecora ANCESTRAL SPECIES 7 ENSGT00940000162152.k ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Yarkand deer MODERN SPECIES CEP57 (ENSCHYG00000001878) #9 MTMR2 (ENSCHYG00000001840) #10 ENSCHYG00000001826 MAML2 (ENSCHYG00000001814) #11 CCDC82 (ENSCHYG00000001774) #13 JRKL (ENSCHYG00000001755) #14 ENSCHYG00000001741 CNTN5 (ENSCHYG00000001656) #16 ARHGAP42 (ENSCHYG00000001400) #17 PGR (ENSCHYG00000001265) #18 ENSCHYG00000001249 ENSCHYG00000001237 TRPC6 (ENSCHYG00000001196) #19 ANGPTL5 (ENSCHYG00000001077) #20 CEP126 (ENSCHYG00000001029) #21 CFAP300 (ENSCHYG00000000983) #22 YAP1 (ENSCHYG00000000950) #23 BIRC3 (ENSCHYG00000000926) #24 BIRC2 (ENSCHYG00000000902) #25 ENSCHYG00000000892 TMEM123 (ENSCHYG00000000870) #26 MMP7 (ENSCHYG00000000857) #27 MMP20 (ENSCHYG00000000837) #28 MMP27 (ENSCHYG00000000792) #29 MMP8 (ENSCHYG00000000770) #30 ENSCHYG00000000747 #32 MMP1 (ENSCHYG00000000723) #32 MMP3 (ENSCHYG00000000701) #31 MMP12 (ENSCHYG00000000688) #34 MMP13 (ENSCHYG00000000652) #35 DCUN1D5 (ENSCHYG00000000628) #36 Percora_a ANCESTRAL SPECIES 6 ENSGT00940000162152.k ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Siberian musk deer MODERN SPECIES 1172 FAM76B (ENSMMSG00000017563) #8 CEP57 (ENSMMSG00000017678) #9 MTMR2 (ENSMMSG00000017890) #10 MAML2 (ENSMMSG00000017946) #11 ENSMMSG00000017987 #11 CCDC82 (ENSMMSG00000018018) #13 JRKL (ENSMMSG00000018096) #14 ENSMMSG00000018121 CNTN5 (ENSMMSG00000018181) #16 ENSMMSG00000018817 ARHGAP42 (ENSMMSG00000018863) #17 PGR (ENSMMSG00000018992) #18 TRPC6 (ENSMMSG00000019068) #19 ANGPTL5 (ENSMMSG00000019261) #20 CEP126 (ENSMMSG00000019297) #21 CFAP300 (ENSMMSG00000019347) #22 YAP1 (ENSMMSG00000019446) #23 ENSMMSG00000020213 ENSMMSG00000020239 #24 ENSMMSG00000020291 #25 ENSMMSG00000020342 ENSMMSG00000020366 #26 MMP7 (ENSMMSG00000020500) #27 MMP20 (ENSMMSG00000020524) #28 MMP27 (ENSMMSG00000020593) #29 MMP8 (ENSMMSG00000020627) #30 MMP1 (ENSMMSG00000020664) #32 MMP3 (ENSMMSG00000020691) #31 MMP12 (ENSMMSG00000020713) #34 MMP13 (ENSMMSG00000020775) #35 DCUN1D5 (ENSMMSG00000020795) #36 Bovidae ANCESTRAL SPECIES 6 ENSGT00940000162152.k ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Caprinae ANCESTRAL SPECIES 6 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986.b #13 ENSGT00940000161513 #14 ENSGT00940000153525.g.b.a.l ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Goat MODERN SPECIES 6 ENSCHIG00000011629 #11 ENSCHIG00000012117 #11 ENSCHIG00000025173 #13 JRKL (ENSCHIG00000013254) #14 ENSCHIG00000026137 ENSCHIG00000008854 ENSCHIG00000012754 ENSCHIG00000025381 CNTN5 (ENSCHIG00000008692) #16 ENSCHIG00000014784 ARHGAP42 (ENSCHIG00000024088) #17 PGR (ENSCHIG00000021765) #18 TRPC6 (ENSCHIG00000012921) #19 ANGPTL5 (ENSCHIG00000020358) #20 CEP126 (ENSCHIG00000010122) #21 CFAP300 (ENSCHIG00000009065) #22 YAP1 (ENSCHIG00000017090) #23 ENSCHIG00000023994 ENSCHIG00000018499 BIRC3 (ENSCHIG00000012208) #24 BIRC2 (ENSCHIG00000017347) #25 ENSCHIG00000013361 #26 MMP7 (ENSCHIG00000026468) #27 MMP20 (ENSCHIG00000026359) #28 MMP27 (ENSCHIG00000012641) #29 MMP8 (ENSCHIG00000026968) #30 MMP1 (ENSCHIG00000010427) #32 MMP3 (ENSCHIG00000022679) #31 MMP12 (ENSCHIG00000026649) #34 MMP13 (ENSCHIG00000021039) #35 DCUN1D5 (ENSCHIG00000021271) #36 Rambouillet Sheep MODERN SPECIES 6 SESN3 (ENSOARG00020023675) FAM76B (ENSOARG00020023594) #8 CEP57 (ENSOARG00020023483) #9 ENSOARG00020023366 #10 MAML2 (ENSOARG00020023344) #11 ENSOARG00020023333 #11 JRKL (ENSOARG00020023202) #14 ENSOARG00020023185 ENSOARG00020023161 ENSOARG00020023102 CNTN5 (ENSOARG00020022860) #16 ENSOARG00020022833 ARHGAP42 (ENSOARG00020022418) #17 TRPC6 (ENSOARG00020021734) #19 ANGPTL5 (ENSOARG00020021669) #20 CFAP300 (ENSOARG00020021370) #22 YAP1 (ENSOARG00020020483) #23 BIRC3 (ENSOARG00020020405) #24 ENSOARG00020020385 BIRC2 (ENSOARG00020020262) #25 MMP7 (ENSOARG00020020219) #27 MMP7 (ENSOARG00020020127) #27 MMP20 (ENSOARG00020020039) #28 MMP27 (ENSOARG00020020000) #29 MMP8 (ENSOARG00020019912) #30 MMP1 (ENSOARG00020019819) #32 MMP12 (ENSOARG00020019763) #34 DCUN1D5 (ENSOARG00020019585) #36 DYNC2H1 (ENSOARG00020014518) #37 DDI1 (ENSOARG00020014392) PDGFD (ENSOARG00020014159) Bovinae ANCESTRAL SPECIES 21 ENSGT00950000183168.A ENSGT00940000153117.B.c.b ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 American bison MODERN SPECIES 2504 CEP126 (ENSBBBG00000007271) #21 CFAP300 (ENSBBBG00000018620) #22 YAP1 (ENSBBBG00000018628) #23 Bos ANCESTRAL SPECIES 20 ENSGT00950000183168.A ENSGT00940000153117.B.c.b ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b.l #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Bos_b DUPLICATION Bos_b ANCESTRAL SPECIES 19 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559.c #22 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000047559.d.b #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b.l.a #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b.kb #32 ENSGT00940000154907.b.lb #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 Hybrid Bos Indicus MODERN SPECIES 6 SESN3 (ENSBIXG00005002907) FAM76B (ENSBIXG00005017806) #8 CEP57 (ENSBIXG00005017776) #9 MTMR2 (ENSBIXG00005017635) #10 MAML2 (ENSBIXG00005017561) #11 CCDC82 (ENSBIXG00005017501) #13 JRKL (ENSBIXG00005017457) #14 ENSBIXG00005017419 CNTN5 (ENSBIXG00005017345) #16 ENSBIXG00005017120 ARHGAP42 (ENSBIXG00005002766) #17 PGR (ENSBIXG00005016631) #18 TRPC6 (ENSBIXG00005002629) #19 ANGPTL5 (ENSBIXG00005016445) #20 CEP126 (ENSBIXG00005016413) #21 ENSBIXG00005002602 #22 ENSBIXG00005000087 YAP1 (ENSBIXG00005016306) #23 BIRC3 (ENSBIXG00005002521) #24 ENSBIXG00005015904 #25 ENSBIXG00005015835 ENSBIXG00005015827 #26 MMP7 (ENSBIXG00005015796) #27 MMP20 (ENSBIXG00005015765) #28 MMP27 (ENSBIXG00005007505) #29 MMP8 (ENSBIXG00005015697) #30 ENSBIXG00005015654 #32 ENSBIXG00005002351 #32 MMP3 (ENSBIXG00005015577) #31 MMP12 (ENSBIXG00005015572) #34 MMP13 (ENSBIXG00005015552) #35 Bos_b DUPLICATION Bos_b ANCESTRAL SPECIES 3 ENSGT00390000001170 ENSGT00490000043417 ENSGT00940000155759 ENSGT00940000160383 ENSGT00390000006705 ENSGT01100000263481.n.a.b.b.b.b ENSGT00940000158559 ENSGT00940000156095 ENSGT00940000160205 ENSGT00940000155324 ENSGT01050000244824.D.b ENSGT01030000234618.F ENSGT01050000244848.C.a ENSGT00950000183123.g.a.a.b.fb.b ENSGT00940000159262 ENSGT00510000047559.d.a #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00940000158921.f.a ENSGT00940000157521.b ENSGT00900000142862 ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b.b ENSGT00390000008033 ENSGT00950000182860.a.b.b ENSGT00390000006631 ENSGT00950000183208.A.c.a ENSGT00940000154940.fb.b ENSGT00510000047245.w.a.b ENSGT00940000157233 ENSGT00390000016542 Cow MODERN SPECIES 11 TMEM163 (ENSBTAG00000018753) ACMSD (ENSBTAG00000008039) CCNT2 (ENSBTAG00000014158) MAP3K19 (ENSBTAG00000014409) RAB3GAP1 (ENSBTAG00000013449) ENSBTAG00000050570 ZRANB3 (ENSBTAG00000026842) R3HDM1 (ENSBTAG00000013302) UBXN4 (ENSBTAG00000015169) LCT (ENSBTAG00000015170) MCM6 (ENSBTAG00000015172) DARS1 (ENSBTAG00000009949) CXCR4 (ENSBTAG00000001060) ENSBTAG00000021755 THSD7B (ENSBTAG00000044055) ENSBTAG00000039437 #22 HNMT (ENSBTAG00000014432) ENSBTAG00000050067 ENSBTAG00000001627 SPOPL (ENSBTAG00000013455) NXPH2 (ENSBTAG00000018147) ENSBTAG00000017629 LRP1B (ENSBTAG00000024632) ENSBTAG00000050185 ENSBTAG00000054433 KYNU (ENSBTAG00000032277) ARHGAP15 (ENSBTAG00000032289) ENSBTAG00000050589 GTDC1 (ENSBTAG00000001132) ZEB2 (ENSBTAG00000012615) ZEB2 (ENSBTAG00000048810) Hybrid Bos Indicus MODERN SPECIES 11 TMEM163 (ENSBIXG00005001832) ACMSD (ENSBIXG00005014175) CCNT2 (ENSBIXG00005014240) MAP3K19 (ENSBIXG00005014314) ENSBIXG00005014335 RAB3GAP1 (ENSBIXG00005001936) ZRANB3 (ENSBIXG00005014603) R3HDM1 (ENSBIXG00005002094) UBXN4 (ENSBIXG00005014833) LCT (ENSBIXG00005014879) MCM6 (ENSBIXG00005002156) DARS1 (ENSBIXG00005002198) CXCR4 (ENSBIXG00005015020) ENSBIXG00005015049 THSD7B (ENSBIXG00005015144) ENSBIXG00005015215 #22 HNMT (ENSBIXG00005015241) SPOPL (ENSBIXG00005015294) ENSBIXG00005015307 NXPH2 (ENSBIXG00005015323) ENSBIXG00005015329 ENSBIXG00005015364 LRP1B (ENSBIXG00005015953) ENSBIXG00005016245 KYNU (ENSBIXG00005002592) ARHGAP15 (ENSBIXG00005016328) GTDC1 (ENSBIXG00005016592) ZEB2 (ENSBIXG00005017016) ENSBIXG00005002793 ENSBIXG00005017172 ACVR2A (ENSBIXG00005002803) Bos_b ANCESTRAL SPECIES 19 ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559.c #22 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000047559.d.b #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b.l.a #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b.kb #32 ENSGT00940000154907.b.lb #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Cow MODERN SPECIES 6 SESN3 (ENSBTAG00000004034) FAM76B (ENSBTAG00000020748) #8 CEP57 (ENSBTAG00000016547) #9 MTMR2 (ENSBTAG00000016557) #10 MAML2 (ENSBTAG00000037962) #11 CCDC82 (ENSBTAG00000006581) #13 JRKL (ENSBTAG00000037488) #14 ENSBTAG00000051087 ENSBTAG00000054100 CNTN5 (ENSBTAG00000020466) #16 ARHGAP42 (ENSBTAG00000004423) #17 PGR (ENSBTAG00000024648) #18 TRPC6 (ENSBTAG00000011227) #19 ANGPTL5 (ENSBTAG00000005308) #20 CEP126 (ENSBTAG00000020032) #21 CFAP300 (ENSBTAG00000015309) #22 YAP1 (ENSBTAG00000039307) #23 BIRC3 (ENSBTAG00000024918) #24 BIRC2 (ENSBTAG00000035735) #25 ENSBTAG00000052956 ENSBTAG00000049233 #26 MMP7 (ENSBTAG00000004594) #27 MMP20 (ENSBTAG00000014251) #28 MMP27 (ENSBTAG00000040567) #29 MMP8 (ENSBTAG00000046732) #30 ENSBTAG00000015818 #32 MMP1 (ENSBTAG00000048029) #32 MMP3 (ENSBTAG00000037768) #31 MMP12 (ENSBTAG00000053542) #34 MMP13 (ENSBTAG00000015059) #35 ENSBTAG00000050505 Bos_a ANCESTRAL SPECIES 15 ENSGT00950000183168.A ENSGT00940000153117.B.c.b ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00390000003682.gb.a.d.a.b.a ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b.l #25 ENSGT00910000147719.a ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Domestic yak MODERN SPECIES 4 ENSBGRG00000012109 FAM76B (ENSBGRG00000012187) #8 CEP57 (ENSBGRG00000012542) #9 MTMR2 (ENSBGRG00000013219) #10 MAML2 (ENSBGRG00000013332) #11 CCDC82 (ENSBGRG00000013494) #13 ENSBGRG00000013770 CNTN5 (ENSBGRG00000013816) #16 ENSBGRG00000014381 ARHGAP42 (ENSBGRG00000014431) #17 ENSBGRG00000015030 PGR (ENSBGRG00000015051) #18 TRPC6 (ENSBGRG00000015265) #19 ANGPTL5 (ENSBGRG00000015671) #20 CEP126 (ENSBGRG00000015803) #21 CFAP300 (ENSBGRG00000015991) #22 ENSBGRG00000016235 YAP1 (ENSBGRG00000016272) #23 ENSBGRG00000016649 BIRC3 (ENSBGRG00000016714) #24 ENSBGRG00000016826 #25 ENSBGRG00000017104 ENSBGRG00000017169 #26 MMP7 (ENSBGRG00000017747) #27 MMP20 (ENSBGRG00000017827) #28 MMP27 (ENSBGRG00000017957) #29 MMP8 (ENSBGRG00000018057) #30 ENSBGRG00000018167 #32 MMP1 (ENSBGRG00000018480) #32 MMP3 (ENSBGRG00000018711) #31 MMP12 (ENSBGRG00000018771) #34 Wild yak MODERN SPECIES 378 ANGPTL5 (ENSBMUG00000018852) #20 CEP126 (ENSBMUG00000018836) #21 CFAP300 (ENSBMUG00000018810) #22 YAP1 (ENSBMUG00000018735) #23 BIRC3 (ENSBMUG00000018706) #24 Camelidae ANCESTRAL SPECIES 32 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Alpaca MODERN SPECIES 658 CFAP300 (ENSVPAG00000002780) #22 YAP1 (ENSVPAG00000002791) #23 BIRC3 (ENSVPAG00000002797) #24 BIRC2 (ENSVPAG00000002800) #25 Arabian camel MODERN SPECIES 1 CEP57 (ENSCDRG00005016540) #9 MTMR2 (ENSCDRG00005016764) #10 ENSCDRG00005016889 #11 ENSCDRG00005016961 #11 CCDC82 (ENSCDRG00005016974) #13 JRKL (ENSCDRG00005017005) #14 ENSCDRG00005017020 CNTN5 (ENSCDRG00005017083) #16 ENSCDRG00005017534 ARHGAP42 (ENSCDRG00005017619) #17 PGR (ENSCDRG00005000147) #18 TRPC6 (ENSCDRG00005000413) #19 ENSCDRG00005000933 ANGPTL5 (ENSCDRG00005000957) #20 CEP126 (ENSCDRG00005000987) #21 CFAP300 (ENSCDRG00005001024) #22 YAP1 (ENSCDRG00005001090) #23 BIRC3 (ENSCDRG00005001220) #24 BIRC2 (ENSCDRG00005001258) #25 ENSCDRG00005001278 ENSCDRG00005001282 #26 MMP7 (ENSCDRG00005001294) #27 MMP20 (ENSCDRG00005001309) #28 MMP27 (ENSCDRG00005001340) #29 MMP8 (ENSCDRG00005001367) #30 MMP1 (ENSCDRG00005001400) #32 MMP3 (ENSCDRG00005001425) #31 MMP12 (ENSCDRG00005001447) #34 MMP13 (ENSCDRG00005001466) #35 DCUN1D5 (ENSCDRG00005001503) #36 DYNC2H1 (ENSCDRG00005001586) #37 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Laurasiatheria_c ANCESTRAL SPECIES 23 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Chiroptera ANCESTRAL SPECIES 33 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Microchiroptera ANCESTRAL SPECIES 34 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00910000147719 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 Greater horseshoe bat MODERN SPECIES 2 SESN3 (ENSRFEG00010020812) FAM76B (ENSRFEG00010020857) #8 CEP57 (ENSRFEG00010020926) #9 MTMR2 (ENSRFEG00010021018) #10 MAML2 (ENSRFEG00010021043) #11 CCDC82 (ENSRFEG00010021069) #13 JRKL (ENSRFEG00010021090) #14 ENSRFEG00010021116 CNTN5 (ENSRFEG00010021161) #16 ARHGAP42 (ENSRFEG00010021297) #17 ENSRFEG00010021353 PGR (ENSRFEG00010021367) #18 TRPC6 (ENSRFEG00010021416) #19 ANGPTL5 (ENSRFEG00010005960) #20 CEP126 (ENSRFEG00010005996) #21 CFAP300 (ENSRFEG00010006073) #22 YAP1 (ENSRFEG00010006175) #23 ENSRFEG00010006344 BIRC3 (ENSRFEG00010006379) #24 BIRC2 (ENSRFEG00010006459) #25 ENSRFEG00010006526 ENSRFEG00010006546 #26 ENSRFEG00010006590 MMP7 (ENSRFEG00010006603) #27 MMP20 (ENSRFEG00010006633) #28 MMP27 (ENSRFEG00010006694) #29 MMP8 (ENSRFEG00010006863) #30 MMP10 (ENSRFEG00010007505) MMP1 (ENSRFEG00010007604) #32 MMP3 (ENSRFEG00010007645) #31 MMP12 (ENSRFEG00010007757) #34 Microbat MODERN SPECIES 1076 CNTN5 (ENSMLUG00000008804) #16 ENSMLUG00000026332 ENSMLUG00000007255 #17 ENSMLUG00000022851 #18 TRPC6 (ENSMLUG00000013762) #19 ANGPTL5 (ENSMLUG00000002681) #20 CEP126 (ENSMLUG00000002690) #21 CFAP300 (ENSMLUG00000001734) #22 YAP1 (ENSMLUG00000000854) #23 BIRC3 (ENSMLUG00000015772) #24 BIRC2 (ENSMLUG00000015779) #25 MMP7 (ENSMLUG00000008134) #27 MMP20 (ENSMLUG00000008156) #28 MMP27 (ENSMLUG00000008174) #29 MMP8 (ENSMLUG00000008198) #30 ENSMLUG00000009131 #32 MMP3 (ENSMLUG00000000984) #31 MMP12 (ENSMLUG00000000992) #34 ENSMLUG00000030430 #35 ENSMLUG00000006344 #35 DCUN1D5 (ENSMLUG00000006350) #36 ENSMLUG00000026461 Megabat MODERN SPECIES 802 CFAP300 (ENSPVAG00000000823) #22 YAP1 (ENSPVAG00000000824) #23 Equus ANCESTRAL SPECIES 25 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT01010000229305 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Donkey MODERN SPECIES 12 CEP57 (ENSEASG00005011227) #9 MTMR2 (ENSEASG00005011224) #10 ENSEASG00005036655 MAML2 (ENSEASG00005011221) #11 CCDC82 (ENSEASG00005011214) #13 JRKL (ENSEASG00005035447) #14 ENSEASG00005011209 ENSEASG00005011207 ENSEASG00005011203 CNTN5 (ENSEASG00005011200) #16 ARHGAP42 (ENSEASG00005011181) #17 PGR (ENSEASG00005011167) #18 TRPC6 (ENSEASG00005011159) #19 ANGPTL5 (ENSEASG00005011153) #20 CEP126 (ENSEASG00005011151) #21 CFAP300 (ENSEASG00005031746) #22 YAP1 (ENSEASG00005011146) #23 BIRC3 (ENSEASG00005011145) #24 BIRC2 (ENSEASG00005011141) #25 TMEM123 (ENSEASG00005011137) #26 MMP7 (ENSEASG00005011134) #27 MMP20 (ENSEASG00005011128) #28 MMP27 (ENSEASG00005011124) #29 MMP8 (ENSEASG00005011052) #30 MMP1 (ENSEASG00005011048) #32 MMP3 (ENSEASG00005011047) #31 MMP12 (ENSEASG00005011046) #34 MMP13 (ENSEASG00005011044) #35 ENSEASG00005011043 #36 ENSEASG00005011042 #37 ENSEASG00005030689 #37 Horse MODERN SPECIES 28 FAM76B (ENSECAG00000005330) #8 CEP57 (ENSECAG00000010938) #9 MTMR2 (ENSECAG00000018921) #10 MAML2 (ENSECAG00000014537) #11 CCDC82 (ENSECAG00000018064) #13 JRKL (ENSECAG00000001856) #14 ENSECAG00000052632 ENSECAG00000021004 ENSECAG00000037608 CNTN5 (ENSECAG00000000340) #16 ARHGAP42 (ENSECAG00000005829) #17 PGR (ENSECAG00000011511) #18 TRPC6 (ENSECAG00000023421) #19 ANGPTL5 (ENSECAG00000021029) #20 CEP126 (ENSECAG00000000666) #21 CFAP300 (ENSECAG00000008152) #22 YAP1 (ENSECAG00000008660) #23 ENSECAG00000054274 BIRC3 (ENSECAG00000047232) #24 BIRC3 (ENSECAG00000012229) #25 TMEM123 (ENSECAG00000033952) #26 MMP7 (ENSECAG00000021262) #27 MMP20 (ENSECAG00000011739) #28 MMP27 (ENSECAG00000019404) #29 MMP8 (ENSECAG00000044786) #30 MMP1 (ENSECAG00000046821) #32 MMP12 (ENSECAG00000019445) #31 MMP12 (ENSECAG00000056462) #34 MMP13 (ENSECAG00000005506) #35 ENSECAG00000038696 DCUN1D5 (ENSECAG00000005717) #36 Carnivora ANCESTRAL SPECIES 21 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Felidae ANCESTRAL SPECIES ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Panthera ANCESTRAL SPECIES 26 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Tiger MODERN SPECIES 74 TRPC6 (ENSPTIG00000010236) #19 ANGPTL5 (ENSPTIG00000010153) #20 CEP126 (ENSPTIG00000010011) #21 CFAP300 (ENSPTIG00000009894) #22 YAP1 (ENSPTIG00000009822) #23 BIRC3 (ENSPTIG00000009589) #24 BIRC2 (ENSPTIG00000009197) #25 ENSPTIG00000008991 #26 MMP7 (ENSPTIG00000008931) #27 MMP20 (ENSPTIG00000008810) #28 MMP27 (ENSPTIG00000008671) #29 MMP8 (ENSPTIG00000008615) #30 MMP10 (ENSPTIG00000008445) MMP1 (ENSPTIG00000008353) #32 MMP3 (ENSPTIG00000008284) #31 MMP12 (ENSPTIG00000008238) #34 MMP13 (ENSPTIG00000008043) #35 DCUN1D5 (ENSPTIG00000007744) #36 DYNC2H1 (ENSPTIG00000005732) #37 Panthera_a ANCESTRAL SPECIES 29 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 leopard MODERN SPECIES 155 TRPC6 (ENSPPRG00000023460) #19 ANGPTL5 (ENSPPRG00000021042) #20 CEP126 (ENSPPRG00000020277) #21 CFAP300 (ENSPPRG00000019378) #22 YAP1 (ENSPPRG00000017793) #23 BIRC3 (ENSPPRG00000017639) #24 BIRC2 (ENSPPRG00000015656) #25 ENSPPRG00000015061 #26 MMP7 (ENSPPRG00000014613) #27 MMP20 (ENSPPRG00000014290) #28 MMP27 (ENSPPRG00000013916) #29 MMP8 (ENSPPRG00000013466) #30 ENSPPRG00000013409 #32 ENSPPRG00000012489 #31 MMP1 (ENSPPRG00000012447) #32 ENSPPRG00000012357 #31 MMP12 (ENSPPRG00000012183) #34 MMP13 (ENSPPRG00000012080) #35 DCUN1D5 (ENSPPRG00000011374) #36 Cat MODERN SPECIES 241 ENSFCAG00000050268 TRPC6 (ENSFCAG00000010432) #19 ANGPTL5 (ENSFCAG00000001675) #20 CEP126 (ENSFCAG00000026336) #21 CFAP300 (ENSFCAG00000009403) #22 YAP1 (ENSFCAG00000035050) #23 BIRC3 (ENSFCAG00000041774) #24 TMEM123 (ENSFCAG00000041930) #26 MMP7 (ENSFCAG00000015787) #27 MMP20 (ENSFCAG00000015788) #28 MMP27 (ENSFCAG00000015789) #29 MMP8 (ENSFCAG00000015790) #30 ENSFCAG00000047451 #32 MMP10 (ENSFCAG00000015796) MMP1 (ENSFCAG00000015791) #32 MMP3 (ENSFCAG00000015792) #31 MMP12 (ENSFCAG00000010982) #34 MMP13 (ENSFCAG00000000118) #35 ENSFCAG00000049048 DCUN1D5 (ENSFCAG00000037795) #36 Caniformia ANCESTRAL SPECIES 17 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Canidae ANCESTRAL SPECIES 27 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Canis_lupus ANCESTRAL SPECIES 28 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155.a #36 ENSGT00940000154620 #37 ENSGT00950000182999.a.b Dingo MODERN SPECIES 214 TRPC6 (ENSCAFG00020009864) #19 ANGPTL5 (ENSCAFG00020009840) #20 CEP126 (ENSCAFG00020009832) #21 CFAP300 (ENSCAFG00020009803) #22 YAP1 (ENSCAFG00020009787) #23 BIRC3 (ENSCAFG00020009777) #24 BIRC2 (ENSCAFG00020009773) #25 ENSCAFG00020009766 #27 MMP20 (ENSCAFG00020009756) #28 MMP27 (ENSCAFG00020009747) #29 MMP8 (ENSCAFG00020009478) #30 MMP1 (ENSCAFG00020009380) #32 MMP3 (ENSCAFG00020009376) #31 MMP12 (ENSCAFG00020009354) #34 MMP13 (ENSCAFG00020009304) #35 ENSCAFG00020009289 #36 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009260 #37 ENSCAFG00020009235 #37 Dog MODERN SPECIES 33 SLC13A5 (ENSCAFG00845002107) ENSCAFG00845002091 FBXO39 (ENSCAFG00845002052) TEKT1 (ENSCAFG00845002020) SMTNL2 (ENSCAFG00845001965) GGT6 (ENSCAFG00845001898) MYBBP1A (ENSCAFG00845001827) SPNS3 (ENSCAFG00845001659) UBE2G1 (ENSCAFG00845001574) ANKFY1 (ENSCAFG00845001547) CYB5D2 (ENSCAFG00845001514) ENSCAFG00845001392 ENSCAFG00845001326 #19 CEP126 (ENSCAFG00845001272) #21 ANGPTL5 (ENSCAFG00845001246) #20 CFAP300 (ENSCAFG00845001215) #22 YAP1 (ENSCAFG00845001157) #23 BIRC3 (ENSCAFG00845001106) #24 BIRC2 (ENSCAFG00845001046) #25 TMEM123 (ENSCAFG00845001013) #26 MMP7 (ENSCAFG00845000992) #27 MMP20 (ENSCAFG00845000974) #28 MMP27 (ENSCAFG00845000933) #29 MMP8 (ENSCAFG00845000899) #30 MMP1 (ENSCAFG00845000871) #32 MMP3 (ENSCAFG00845000842) #31 MMP12 (ENSCAFG00845000798) #34 MMP13 (ENSCAFG00845000761) #35 DCUN1D5 (ENSCAFG00845000732) #36 ENSCAFG00845000714 ENSCAFG00845000695 #37 Red fox MODERN SPECIES 61 ENSVVUG00000010328 TRPC6 (ENSVVUG00000010347) #19 ANGPTL5 (ENSVVUG00000010509) #20 CEP126 (ENSVVUG00000010517) #21 CFAP300 (ENSVVUG00000010540) #22 YAP1 (ENSVVUG00000010559) #23 BIRC3 (ENSVVUG00000010573) #24 BIRC2 (ENSVVUG00000010579) #25 ENSVVUG00000010721 #26 ENSVVUG00000010725 MMP7 (ENSVVUG00000010731) #27 MMP20 (ENSVVUG00000010743) #28 MMP27 (ENSVVUG00000010759) #29 MMP8 (ENSVVUG00000010844) #30 MMP1 (ENSVVUG00000011949) #32 MMP3 (ENSVVUG00000011962) #31 MMP12 (ENSVVUG00000011970) #34 MMP13 (ENSVVUG00000011996) #35 ENSVVUG00000012007 #36 DYNC2H1 (ENSVVUG00000012126) #37 Caniformia_b ANCESTRAL SPECIES 3 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000159759.e.a #31 ENSGT00940000154907.b #32 ENSGT00940000159759.e.b #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Mustelinae ANCESTRAL SPECIES 111 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000159759.e.a #31 ENSGT00940000154907.b #32 ENSGT00940000159759.e.b #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Ferret MODERN SPECIES 268 TRPC6 (ENSMPUG00000007286) #19 ENSMPUG00000007279 ANGPTL5 (ENSMPUG00000007245) #20 CEP126 (ENSMPUG00000007230) #21 CFAP300 (ENSMPUG00000007217) #22 YAP1 (ENSMPUG00000007208) #23 BIRC3 (ENSMPUG00000007197) #24 BIRC2 (ENSMPUG00000007189) #25 ENSMPUG00000007177 #26 MMP7 (ENSMPUG00000007166) #27 MMP20 (ENSMPUG00000007153) #28 MMP27 (ENSMPUG00000007119) #29 MMP8 (ENSMPUG00000006884) #30 ENSMPUG00000006878 #31 MMP1 (ENSMPUG00000006871) #32 ENSMPUG00000006864 #31 MMP12 (ENSMPUG00000006848) #34 MMP13 (ENSMPUG00000006840) #35 ENSMPUG00000006838 DCUN1D5 (ENSMPUG00000006833) #36 American mink MODERN SPECIES 178 TRPC6 (ENSNVIG00000021482) #19 ANGPTL5 (ENSNVIG00000021554) #20 ENSNVIG00000021570 #21 ENSNVIG00000021581 CFAP300 (ENSNVIG00000021583) #22 YAP1 (ENSNVIG00000021587) #23 ENSNVIG00000021606 BIRC3 (ENSNVIG00000021612) #24 BIRC2 (ENSNVIG00000021650) #25 ENSNVIG00000021676 #26 ENSNVIG00000021687 MMP20 (ENSNVIG00000021713) #28 MMP27 (ENSNVIG00000021721) #29 MMP8 (ENSNVIG00000021739) #30 ENSNVIG00000021764 #32 ENSNVIG00000021891 #31 MMP1 (ENSNVIG00000021897) #32 ENSNVIG00000021908 #31 MMP12 (ENSNVIG00000021917) #34 MMP13 (ENSNVIG00000021947) #35 Ursidae ANCESTRAL SPECIES 15 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759.e.a #31 ENSGT00940000159759.e.b #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Giant Panda MODERN SPECIES 18 ENSAMEG00000003248 #19 ANGPTL5 (ENSAMEG00000009981) #20 CEP126 (ENSAMEG00000009985) #21 CFAP300 (ENSAMEG00000009990) #22 YAP1 (ENSAMEG00000010001) #23 BIRC2 (ENSAMEG00000010031) #25 TMEM123 (ENSAMEG00000010067) #26 MMP7 (ENSAMEG00000010068) #27 MMP20 (ENSAMEG00000010079) #28 MMP27 (ENSAMEG00000010096) #29 MMP8 (ENSAMEG00000010107) #30 ENSAMEG00000028774 #32 ENSAMEG00000010164 #31 MMP1 (ENSAMEG00000010172) #32 ENSAMEG00000010203 #31 MMP12 (ENSAMEG00000010243) #34 MMP13 (ENSAMEG00000010270) #35 DCUN1D5 (ENSAMEG00000010318) #36 DYNC2H1 (ENSAMEG00000010320) #37 Ursus ANCESTRAL SPECIES 17 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759.e.a #31 ENSGT00940000159759.e.b #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000162555 American black bear MODERN SPECIES 6275 CEP126 (ENSUAMG00000011435) #21 CFAP300 (ENSUAMG00000011433) #22 Polar bear MODERN SPECIES 166 TRPC6 (ENSUMAG00000009350) #19 ANGPTL5 (ENSUMAG00000009340) #20 ENSUMAG00000009324 #21 ENSUMAG00000009319 #22 YAP1 (ENSUMAG00000009288) #23 BIRC3 (ENSUMAG00000009275) #24 BIRC2 (ENSUMAG00000009270) #25 ENSUMAG00000009266 #26 MMP7 (ENSUMAG00000009262) #27 MMP20 (ENSUMAG00000009249) #28 MMP27 (ENSUMAG00000009207) #29 MMP8 (ENSUMAG00000009197) #30 ENSUMAG00000009165 #32 ENSUMAG00000009160 #31 MMP1 (ENSUMAG00000009155) #32 ENSUMAG00000009143 #31 MMP12 (ENSUMAG00000009133) #34 MMP13 (ENSUMAG00000009113) #35 DCUN1D5 (ENSUMAG00000009107) #36 Atlantogenata ANCESTRAL SPECIES 40 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Xenarthra ANCESTRAL SPECIES 524 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00530000063929.b #26 Armadillo MODERN SPECIES 4706 ENSDNOG00000032566 ARHGAP42 (ENSDNOG00000030629) #17 PGR (ENSDNOG00000048850) #18 ENSDNOG00000032365 TRPC6 (ENSDNOG00000041704) #19 ANGPTL5 (ENSDNOG00000000744) #20 CEP126 (ENSDNOG00000032731) #21 CFAP300 (ENSDNOG00000033697) #22 ENSDNOG00000010571 #23 ENSDNOG00000010589 BIRC3 (ENSDNOG00000009485) #24 ENSDNOG00000044118 #26 Sloth MODERN SPECIES 3049 CFAP300 (ENSCHOG00000008036) #22 Afrotheria ANCESTRAL SPECIES 43 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Tenrec MODERN SPECIES 3367 CFAP300 (ENSETEG00000010539) #22 YAP1 (ENSETEG00000010542) #23 Afrotheria_a ANCESTRAL SPECIES 41 ENSGT00940000162152 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.i.a #24 ENSGT00940000154175.i.b #25 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000163375 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000162085 #34 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 Hyrax MODERN SPECIES 2756 CFAP300 (ENSPCAG00000001490) #22 Elephant MODERN SPECIES 340 ENDOD1 (ENSLAFG00000010482) SESN3 (ENSLAFG00000001537) FAM76B (ENSLAFG00000014029) #8 CEP57 (ENSLAFG00000014511) #9 MTMR2 (ENSLAFG00000008600) #10 MAML2 (ENSLAFG00000001279) #11 CCDC82 (ENSLAFG00000000217) #13 JRKL (ENSLAFG00000032743) #14 ENSLAFG00000026948 CNTN5 (ENSLAFG00000029736) #16 ARHGAP42 (ENSLAFG00000012625) #17 ENSLAFG00000006479 #18 TRPC6 (ENSLAFG00000015085) #19 ANGPTL5 (ENSLAFG00000003621) #20 CEP126 (ENSLAFG00000003624) #21 CFAP300 (ENSLAFG00000003215) #22 YAP1 (ENSLAFG00000003216) #23 BIRC3 (ENSLAFG00000006047) #24 BIRC2 (ENSLAFG00000002953) #25 ENSLAFG00000002954 #26 MMP7 (ENSLAFG00000002955) #27 MMP20 (ENSLAFG00000010998) #28 MMP27 (ENSLAFG00000013164) #29 MMP8 (ENSLAFG00000013170) #30 MMP10 (ENSLAFG00000023165) MMP1 (ENSLAFG00000001642) #32 MMP3 (ENSLAFG00000010058) #31 MMP12 (ENSLAFG00000010062) #34 MMP13 (ENSLAFG00000006001) #35 DCUN1D5 (ENSLAFG00000016481) #36 DYNC2H1 (ENSLAFG00000016899) #37 Marsupialia ANCESTRAL SPECIES 5 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.h #24 ENSGT00940000154175.g #24 ENSGT00530000063929.b #26 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000166491 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000161737.n.b.a ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000161513 #14 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.h #24 ENSGT00940000154175.g #24 ENSGT00530000063929.b #26 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000166491 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Diprotodontia ANCESTRAL SPECIES 71 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.h #24 ENSGT00940000154175.g #24 ENSGT00530000063929.b #26 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000166491 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Diprotodontia_a ANCESTRAL SPECIES 68 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000153524.a.b ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175.h #24 ENSGT00940000154175.g #24 ENSGT00530000063929.b #26 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000161871 #30 ENSGT00940000154907.b #32 ENSGT00940000159759 #31 ENSGT00940000166491 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 Common wonbat MODERN SPECIES 486 CNTN5 (ENSVURG00010012213) #16 ARHGAP42 (ENSVURG00010012829) #17 PGR (ENSVURG00010012885) #18 TRPC6 (ENSVURG00010013047) #19 ENSVURG00010013069 ANGPTL5 (ENSVURG00010013075) #20 ENSVURG00010013081 #21 CFAP300 (ENSVURG00010013089) #22 YAP1 (ENSVURG00010013100) #23 ENSVURG00010013133 #24 ENSVURG00010013150 #26 ENSVURG00010013157 ENSVURG00010013167 MMP20 (ENSVURG00010013183) #28 ENSVURG00010013210 MMP27 (ENSVURG00010013217) #29 MMP8 (ENSVURG00010013224) #30 MMP1 (ENSVURG00010013247) #32 MMP3 (ENSVURG00010013258) #31 ENSVURG00010013278 MMP13 (ENSVURG00010013285) #35 DCUN1D5 (ENSVURG00010013299) #36 DYNC2H1 (ENSVURG00010013327) #37 koala MODERN SPECIES 62 CNTN5 (ENSPCIG00000019220) #16 ENSPCIG00000034103 ARHGAP42 (ENSPCIG00000010806) #17 ENSPCIG00000036784 #18 TRPC6 (ENSPCIG00000012333) #19 ENSPCIG00000015913 ANGPTL5 (ENSPCIG00000015911) #20 ENSPCIG00000015909 #21 ENSPCIG00000024466 #22 YAP1 (ENSPCIG00000000622) #23 ENSPCIG00000000593 #24 ENSPCIG00000000555 #24 ENSPCIG00000000538 #26 ENSPCIG00000000519 ENSPCIG00000000404 MMP20 (ENSPCIG00000000326) #28 MMP27 (ENSPCIG00000000304) #29 MMP8 (ENSPCIG00000000259) #30 MMP1 (ENSPCIG00000000229) #32 MMP3 (ENSPCIG00000000208) #31 ENSPCIG00000000181 MMP13 (ENSPCIG00000031091) #35 DCUN1D5 (ENSPCIG00000028494) #36 DYNC2H1 (ENSPCIG00000024886) #37 Tasmanian devil MODERN SPECIES 2 SESN3 (ENSSHAG00000016018) ENSSHAG00000014772 FAM76B (ENSSHAG00000030305) #8 CEP57 (ENSSHAG00000013049) #9 MTMR2 (ENSSHAG00000012900) #10 MAML2 (ENSSHAG00000024964) #11 CCDC82 (ENSSHAG00000020626) #13 JRKL (ENSSHAG00000029565) #14 ENSSHAG00000000656 CNTN5 (ENSSHAG00000012347) #16 ARHGAP42 (ENSSHAG00000015492) #17 PGR (ENSSHAG00000028354) #18 TRPC6 (ENSSHAG00000001852) #19 ANGPTL5 (ENSSHAG00000008135) #20 ENSSHAG00000008521 #21 CFAP300 (ENSSHAG00000021373) #22 YAP1 (ENSSHAG00000031498) #23 ENSSHAG00000022169 #24 ENSSHAG00000031693 #26 ENSSHAG00000012748 MMP20 (ENSSHAG00000013213) #28 MMP27 (ENSSHAG00000013837) #29 MMP8 (ENSSHAG00000013911) #30 MMP1 (ENSSHAG00000014131) #32 MMP3 (ENSSHAG00000014413) #31 ENSSHAG00000014540 MMP13 (ENSSHAG00000014854) #35 DCUN1D5 (ENSSHAG00000029020) #36 DYNC2H1 (ENSSHAG00000015321) #37 ENSSHAG00000027313 PDGFD (ENSSHAG00000029164) Opossum MODERN SPECIES 3 ENSMODG00000028096 ENSMODG00000041464 ENSMODG00000049477 ENSMODG00000047764 ENSMODG00000024417 ENSMODG00000044732 ENSMODG00000024073 ENSMODG00000024074 ENSMODG00000000415 CNTN5 (ENSMODG00000000441) #16 ARHGAP42 (ENSMODG00000000486) #17 PGR (ENSMODG00000000509) #18 TRPC6 (ENSMODG00000000537) #19 ANGPTL5 (ENSMODG00000000550) #20 ENSMODG00000000558 #21 CFAP300 (ENSMODG00000000567) #22 YAP1 (ENSMODG00000039367) #23 ENSMODG00000000587 ENSMODG00000000589 #24 ENSMODG00000000608 #24 ENSMODG00000000611 #26 ENSMODG00000000623 MMP20 (ENSMODG00000000639) #28 MMP27 (ENSMODG00000000669) #29 MMP8 (ENSMODG00000000692) #30 MMP1 (ENSMODG00000000712) #32 MMP3 (ENSMODG00000000734) #31 ENSMODG00000000767 MMP13 (ENSMODG00000000794) #35 DCUN1D5 (ENSMODG00000000824) #36 DYNC2H1 (ENSMODG00000000925) #37 Platypus MODERN SPECIES 12 ENSOANG00000010405 ENSOANG00000010505 SESN3 (ENSOANG00000010503) FAM76B (ENSOANG00000045559) #8 CEP57 (ENSOANG00000040575) #9 MTMR2 (ENSOANG00000010499) #10 MAML2 (ENSOANG00000010498) #11 ENSOANG00000043963 ##11 ENSOANG00000010497 CNTN5 (ENSOANG00000010496) #16 ARHGAP42 (ENSOANG00000010495) #17 ENSOANG00000010494 #18 TRPC6 (ENSOANG00000010492) #19 ANGPTL5 (ENSOANG00000010491) #20 ENSOANG00000010490 #21 CFAP300 (ENSOANG00000010489) #22 YAP1 (ENSOANG00000010488) #23 ENSOANG00000010486 #24 ENSOANG00000046987 #26 ENSOANG00000047319 #27 MMP8 (ENSOANG00000010484) #30 MMP1 (ENSOANG00000010480) #32 ENSOANG00000010478 MMP13 (ENSOANG00000010477) #35 ENSOANG00000021139 #35 DCUN1D5 (ENSOANG00000010476) #36 DYNC2H1 (ENSOANG00000010474) #37 PDGFD (ENSOANG00000049229) ENSOANG00000010472 GRIA4 (ENSOANG00000010470) MSANTD4 (ENSOANG00000038526) Sauria ANCESTRAL SPECIES 2 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b Archelosauria ANCESTRAL SPECIES ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b Archosauria ANCESTRAL SPECIES 2 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000156340.b ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b Aves ANCESTRAL SPECIES ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 Neognathae ANCESTRAL SPECIES 1 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 Neognathae_b ANCESTRAL SPECIES ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 Neognathae_c ANCESTRAL SPECIES 11 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Kakapo MODERN SPECIES 11 ENSSHBG00005003237 CWC15 (ENSSHBG00005003187) ENDOD1 (ENSSHBG00005003178) SESN3 (ENSSHBG00005003167) FAM76B (ENSSHBG00005003148) #8 CEP57 (ENSSHBG00005003137) #9 MTMR2 (ENSSHBG00005003123) #10 MAML2 (ENSSHBG00005003105) #11 CCDC82 (ENSSHBG00005003090) #13 CNTN5 (ENSSHBG00005003033) #16 ARHGAP42 (ENSSHBG00005003000) #17 PGR (ENSSHBG00005002963) #18 TRPC6 (ENSSHBG00005002929) #19 ANGPTL5 (ENSSHBG00005002883) #20 ENSSHBG00005002857 #21 ENSSHBG00005002847 #22 YAP1 (ENSSHBG00005002837) #23 ENSSHBG00005002816 #24 TMEM123 (ENSSHBG00005002791) #26 MMP7 (ENSSHBG00005002758) #27 MMP27 (ENSSHBG00005002736) #29 MMP1 (ENSSHBG00005002695) #32 ENSSHBG00005002636 MMP13 (ENSSHBG00005002584) #35 DCUN1D5 (ENSSHBG00005002553) #36 DYNC2H1 (ENSSHBG00005002058) #37 PDGFD (ENSSHBG00005001760) GRIA4 (ENSSHBG00005001636) MSANTD4 (ENSSHBG00005001565) KBTBD3 (ENSSHBG00005001552) AASDHPPT (ENSSHBG00005001507) Golden eagle MODERN SPECIES 10 AMOTL1 (ENSACCG00020009124) CWC15 (ENSACCG00020009107) ENDOD1 (ENSACCG00020009097) SESN3 (ENSACCG00020009081) FAM76B (ENSACCG00020009069) #8 CEP57 (ENSACCG00020009041) #9 MTMR2 (ENSACCG00020009006) #10 MAML2 (ENSACCG00020008985) #11 CCDC82 (ENSACCG00020008966) #13 CNTN5 (ENSACCG00020008929) #16 ARHGAP42 (ENSACCG00020008871) #17 PGR (ENSACCG00020008798) #18 TRPC6 (ENSACCG00020008765) #19 ANGPTL5 (ENSACCG00020008738) #20 CEP126 (ENSACCG00020008718) #21 CFAP300 (ENSACCG00020008702) #22 YAP1 (ENSACCG00020008686) #23 ENSACCG00020008627 #24 TMEM123 (ENSACCG00020008603) #26 ENSACCG00020008585 MMP27 (ENSACCG00020008570) #29 MMP1 (ENSACCG00020008549) #32 ENSACCG00020008528 ENSACCG00020008499 MMP13 (ENSACCG00020008442) #35 DCUN1D5 (ENSACCG00020008426) #36 DYNC2H1 (ENSACCG00020008188) #37 PDGFD (ENSACCG00020007995) GRIA4 (ENSACCG00020007893) MSANTD4 (ENSACCG00020007849) KBTBD3 (ENSACCG00020007839) Passeriformes ANCESTRAL SPECIES 1 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Great tit MODERN SPECIES AMOTL1 (ENSPMJG00000017863) CWC15 (ENSPMJG00000017862) ENDOD1 (ENSPMJG00000017860) SESN3 (ENSPMJG00000017859) FAM76B (ENSPMJG00000017858) #8 CEP57 (ENSPMJG00000017857) #9 MTMR2 (ENSPMJG00000017856) #10 MAML2 (ENSPMJG00000017855) #11 CCDC82 (ENSPMJG00000017854) #13 CNTN5 (ENSPMJG00000017853) #16 ARHGAP42 (ENSPMJG00000017852) #17 PGR (ENSPMJG00000017851) #18 TRPC6 (ENSPMJG00000017850) #19 ANGPTL5 (ENSPMJG00000017849) #20 ENSPMJG00000017848 #21 CFAP300 (ENSPMJG00000017846) #22 YAP1 (ENSPMJG00000017845) #23 ENSPMJG00000017843 #24 TMEM123 (ENSPMJG00000017842) #26 ENSPMJG00000017841 ##32 MMP27 (ENSPMJG00000017840) #29 MMP1 (ENSPMJG00000017839) #32 ENSPMJG00000017838 ENSPMJG00000017837 MMP13 (ENSPMJG00000017836) #35 DCUN1D5 (ENSPMJG00000017835) #36 ENSPMJG00000017834 #37 ENSPMJG00000017833 #37 PDGFD (ENSPMJG00000017831) GRIA4 (ENSPMJG00000017826) MSANTD4 (ENSPMJG00000017825) Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Flycatcher MODERN SPECIES AMOTL1 (ENSFALG00000000320) CWC15 (ENSFALG00000027709) ENDOD1 (ENSFALG00000000330) SESN3 (ENSFALG00000000333) FAM76B (ENSFALG00000000336) #8 CEP57 (ENSFALG00000000337) #9 MTMR2 (ENSFALG00000000338) #10 MAML2 (ENSFALG00000000339) #11 CCDC82 (ENSFALG00000024899) #13 CNTN5 (ENSFALG00000000348) #16 ARHGAP42 (ENSFALG00000000353) #17 PGR (ENSFALG00000000354) #18 TRPC6 (ENSFALG00000000356) #19 ANGPTL5 (ENSFALG00000000357) #20 ENSFALG00000000358 #21 CFAP300 (ENSFALG00000000361) #22 YAP1 (ENSFALG00000000364) #23 ENSFALG00000000370 #24 ENSFALG00000000371 ENSFALG00000000372 ##32 MMP27 (ENSFALG00000000375) #29 MMP1 (ENSFALG00000000382) #32 ENSFALG00000000394 ENSFALG00000000397 MMP13 (ENSFALG00000000400) #35 DCUN1D5 (ENSFALG00000000403) #36 DYNC2H1 (ENSFALG00000000411) #37 PDGFD (ENSFALG00000000415) GRIA4 (ENSFALG00000000431) MSANTD4 (ENSFALG00000000440) KBTBD3 (ENSFALG00000023390) Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Medium ground finch MODERN SPECIES 5 AMOTL1 (ENSGFOG00000003833) CWC15 (ENSGFOG00000003791) ENDOD1 (ENSGFOG00000003780) SESN3 (ENSGFOG00000003762) FAM76B (ENSGFOG00000003753) #8 CEP57 (ENSGFOG00000003350) #9 MTMR2 (ENSGFOG00000003280) #10 MAML2 (ENSGFOG00000003232) #11 CCDC82 (ENSGFOG00000003213) #13 ENSGFOG00000003199 CNTN5 (ENSGFOG00000003137) #16 ARHGAP42 (ENSGFOG00000003106) #17 TRPC6 (ENSGFOG00000003038) #19 ANGPTL5 (ENSGFOG00000003011) #20 ENSGFOG00000002958 #21 CFAP300 (ENSGFOG00000002923) #22 YAP1 (ENSGFOG00000002832) #23 ENSGFOG00000002791 #24 TMEM123 (ENSGFOG00000002771) #26 ENSGFOG00000002758 #35 MMP27 (ENSGFOG00000002634) #29 MMP1 (ENSGFOG00000002501) #32 ENSGFOG00000002382 ENSGFOG00000002073 MMP13 (ENSGFOG00000002018) #35 DCUN1D5 (ENSGFOG00000001988) #36 DYNC2H1 (ENSGFOG00000000922) #37 PDGFD (ENSGFOG00000000011) GRIA4 (ENSGFOG00000008060) MSANTD4 (ENSGFOG00000008043) KBTBD3 (ENSGFOG00000008040) Passeroidea ANCESTRAL SPECIES 5 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Zebra finch MODERN SPECIES CWC15 (ENSTGUG00000029544) ENDOD1 (ENSTGUG00000026431) SESN3 (ENSTGUG00000024822) FAM76B (ENSTGUG00000012811) #8 CEP57 (ENSTGUG00000024409) #9 MTMR2 (ENSTGUG00000012806) #10 MAML2 (ENSTGUG00000012803) #11 CCDC82 (ENSTGUG00000012800) #13 CNTN5 (ENSTGUG00000012792) #16 ARHGAP42 (ENSTGUG00000012788) #17 PGR (ENSTGUG00000012778) #18 TRPC6 (ENSTGUG00000012766) #19 ENSTGUG00000022925 ANGPTL5 (ENSTGUG00000024680) #20 ENSTGUG00000012764 #21 CFAP300 (ENSTGUG00000012760) #22 YAP1 (ENSTGUG00000012754) #23 ENSTGUG00000012745 #24 TMEM123 (ENSTGUG00000027337) #26 ENSTGUG00000018460 #35 MMP27 (ENSTGUG00000023611) #29 MMP1 (ENSTGUG00000012737) #32 ENSTGUG00000012735 ENSTGUG00000028841 MMP13 (ENSTGUG00000012726) #35 DCUN1D5 (ENSTGUG00000020472) #36 DYNC2H1 (ENSTGUG00000012697) #37 PDGFD (ENSTGUG00000012693) GRIA4 (ENSTGUG00000012676) MSANTD4 (ENSTGUG00000027619) KBTBD3 (ENSTGUG00000027073) Common canary MODERN SPECIES 4 CWC15 (ENSSCAG00000003798) ENDOD1 (ENSSCAG00000003802) SESN3 (ENSSCAG00000003813) FAM76B (ENSSCAG00000003820) #8 CEP57 (ENSSCAG00000003826) #9 MTMR2 (ENSSCAG00000003835) #10 ENSSCAG00000003855 #11 CCDC82 (ENSSCAG00000003858) #13 CNTN5 (ENSSCAG00000003870) #16 ENSSCAG00000003880 ARHGAP42 (ENSSCAG00000003892) #17 PGR (ENSSCAG00000003909) #18 TRPC6 (ENSSCAG00000003932) #19 ANGPTL5 (ENSSCAG00000003952) #20 ENSSCAG00000003957 #21 CFAP300 (ENSSCAG00000003962) #22 YAP1 (ENSSCAG00000003972) #23 ENSSCAG00000003981 #24 TMEM123 (ENSSCAG00000003984) #26 ENSSCAG00000003992 ##32 MMP27 (ENSSCAG00000003998) #29 MMP1 (ENSSCAG00000004003) #32 ENSSCAG00000004010 ENSSCAG00000004017 MMP13 (ENSSCAG00000004033) #35 DCUN1D5 (ENSSCAG00000004037) #36 DYNC2H1 (ENSSCAG00000004049) #37 PDGFD (ENSSCAG00000004095) GRIA4 (ENSSCAG00000004160) MSANTD4 (ENSSCAG00000004441) KBTBD3 (ENSSCAG00000004445) Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Anatidae ANCESTRAL SPECIES 16 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Pink-footed goose MODERN SPECIES 135 ENSABRG00000009163 ANGPTL5 (ENSABRG00000009100) #20 ENSABRG00000009078 #21 CFAP300 (ENSABRG00000009072) #22 YAP1 (ENSABRG00000009040) #23 ENSABRG00000009019 #24 TMEM123 (ENSABRG00000009015) #26 MMP7 (ENSABRG00000008989) #27 MMP27 (ENSABRG00000008965) #29 MMP1 (ENSABRG00000008947) #32 ENSABRG00000008802 ENSABRG00000008771 MMP13 (ENSABRG00000008766) #35 DCUN1D5 (ENSABRG00000008746) #36 DYNC2H1 (ENSABRG00000008204) #37 PDGFD (ENSABRG00000008147) ENSABRG00000008125 ENSABRG00000008118 ENSABRG00000008103 Duck MODERN SPECIES CLDN34 (ENSAPLG00000000772) SHROOM2 (ENSAPLG00000029599) GPR143 (ENSAPLG00000005661) ENSAPLG00000005235 ENSAPLG00000018495 ANOS1 (ENSAPLG00000004552) ENSAPLG00000007832 MXRA5 (ENSAPLG00000007795) PRKX (ENSAPLG00000007610) ENSAPLG00000009880 ENSAPLG00000026964 PGR (ENSAPLG00000003887) #18 TRPC6 (ENSAPLG00000004017) #19 ANGPTL5 (ENSAPLG00000004584) #20 ENSAPLG00000004690 #21 CFAP300 (ENSAPLG00000004970) #22 YAP1 (ENSAPLG00000005062) #23 ENSAPLG00000005387 #24 TMEM123 (ENSAPLG00000005784) #26 MMP7 (ENSAPLG00000005792) #27 MMP27 (ENSAPLG00000005931) #29 MMP1 (ENSAPLG00000005987) #32 ENSAPLG00000026248 ENSAPLG00000006797 MMP13 (ENSAPLG00000007468) #35 DCUN1D5 (ENSAPLG00000008281) #36 ENSAPLG00000008375 #37 ENSAPLG00000020307 #37 ENSAPLG00000030587 #37 ENSAPLG00000029249 PDGFD (ENSAPLG00000009485) Phasianidae ANCESTRAL SPECIES ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00950000182865.b.b.b.c.a.i.a.b.b ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 ENSGT00390000004663 Japanese quail MODERN SPECIES SESN3 (ENSCJPG00005003931) FAM76B (ENSCJPG00005003854) #8 CEP57 (ENSCJPG00005003853) #9 MTMR2 (ENSCJPG00005003852) #10 ENSCJPG00005003848 #11 ENSCJPG00005003847 #11 CCDC82 (ENSCJPG00005003846) #13 ENSCJPG00005003843 CNTN5 (ENSCJPG00005003828) #16 ARHGAP42 (ENSCJPG00005003808) #17 PGR (ENSCJPG00005003805) #18 TRPC6 (ENSCJPG00005003793) #19 ENSCJPG00005003791 ANGPTL5 (ENSCJPG00005003777) #20 ENSCJPG00005003770 #21 CFAP300 (ENSCJPG00005003768) #22 YAP1 (ENSCJPG00005003761) #23 ENSCJPG00005003758 ENSCJPG00005003757 #24 TMEM123 (ENSCJPG00005003755) #26 ENSCJPG00005003728 #35 MMP27 (ENSCJPG00005003727) #29 MMP1 (ENSCJPG00005003596) #32 ENSCJPG00005003595 ENSCJPG00005003593 MMP13 (ENSCJPG00005003591) #35 DCUN1D5 (ENSCJPG00005003587) #36 ENSCJPG00005003535 #37 PDGFD (ENSCJPG00005003527) ENSCJPG00005003519 GRIA4 (ENSCJPG00005003513) Phasianidae_b ANCESTRAL SPECIES ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00950000182865.b.b.b.c.a.i.a.b.b ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 ENSGT00390000004663 Chicken MODERN SPECIES PGR (ENSGALG00010008178) #18 TRPC6 (ENSGALG00010007455) #19 ENSGALG00010007309 ENSGALG00010007295 ENSGALG00010007411 ENSGALG00010007362 ENSGALG00010007421 ENSGALG00010007974 ENSGALG00010007971 ENSGALG00010007967 ENSGALG00010007961 ENSGALG00010007959 ENSGALG00010007949 ANGPTL5 (ENSGALG00010007937) #20 ENSGALG00010007933 #21 C11orf70 (ENSGALG00010007928) #22 YAP1 (ENSGALG00010007923) #23 BIRC2 (ENSGALG00010007658) #24 TMEM123 (ENSGALG00010007640) #26 MMP7 (ENSGALG00010007586) #35 MMP27 (ENSGALG00010007575) #29 MMP1 (ENSGALG00010007571) #32 ENSGALG00010007554 MMP10 (ENSGALG00010007546) MMP13 (ENSGALG00010007330) #35 DCUN1D5 (ENSGALG00010007532) #36 DYNC2H1 (ENSGALG00010005265) #37 PDGFD (ENSGALG00010005249) ENSGALG00010005230 GRIA4 (ENSGALG00010005223) MSANTD4 (ENSGALG00010005191) Turkey MODERN SPECIES ENSMGAG00000021804 #37 ENSMGAG00000019247 #37 ENSMGAG00000015167 #37 ENSMGAG00000016922 #37 DCUN1D5 (ENSMGAG00000015168) #36 ENSMGAG00000020240 ENSMGAG00000016562 MMP13 (ENSMGAG00000015169) #35 ENSMGAG00000015171 #29 ENSMGAG00000015170 #32 ENSMGAG00000015172 #35 ENSMGAG00000015173 #26 ENSMGAG00000015174 #24 ENSMGAG00000015175 #23 ENSMGAG00000017853 ENSMGAG00000015176 #22 ENSMGAG00000015177 #21 ENSMGAG00000015178 #20 ENSMGAG00000015179 #19 ENSMGAG00000015182 #17 ENSMGAG00000017955 #17 ENSMGAG00000018275 ENSMGAG00000015050 ENSMGAG00000021843 ENSMGAG00000015053 ENSMGAG00000015054 ENSMGAG00000016944 ENSMGAG00000020411 ENSMGAG00000015057 ENSMGAG00000015058 ENSMGAG00000015060 African ostrich MODERN SPECIES 584 ARHGAP42 (ENSSCUG00000012942) #17 TRPC6 (ENSSCUG00000012932) #19 ANGPTL5 (ENSSCUG00000012922) #20 CEP126 (ENSSCUG00000012919) #21 CFAP300 (ENSSCUG00000012917) #22 Australian saltwater crocodile MODERN SPECIES 27 AMOTL1 (ENSCPRG00005015195) CWC15 (ENSCPRG00005015180) ENDOD1 (ENSCPRG00005015178) SESN3 (ENSCPRG00005015169) FAM76B (ENSCPRG00005015082) #8 CEP57 (ENSCPRG00005015066) #9 MTMR2 (ENSCPRG00005015062) #10 MAML2 (ENSCPRG00005015057) #11 CCDC82 (ENSCPRG00005015051) #13 CNTN5 (ENSCPRG00005015041) #16 ARHGAP42 (ENSCPRG00005014996) #17 PGR (ENSCPRG00005014963) #18 TRPC6 (ENSCPRG00005014918) #19 ANGPTL5 (ENSCPRG00005014880) #20 CEP126 (ENSCPRG00005014875) #21 CFAP300 (ENSCPRG00005014867) #22 YAP1 (ENSCPRG00005014865) #23 ENSCPRG00005014841 #24 TMEM123 (ENSCPRG00005014837) #26 MMP7 (ENSCPRG00005014833) #27 ENSCPRG00005014829 #27 ENSCPRG00005014827 MMP20 (ENSCPRG00005014825) #28 MMP27 (ENSCPRG00005014809) #29 ENSCPRG00005014787 #32 ENSCPRG00005014782 #32 ENSCPRG00005014772 MMP13 (ENSCPRG00005014705) #35 DCUN1D5 (ENSCPRG00005014689) #36 DYNC2H1 (ENSCPRG00005014624) #37 PDGFD (ENSCPRG00005014563) Cryptodira ANCESTRAL SPECIES ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491.a.a ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Emydidae ANCESTRAL SPECIES 19 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b.h.a #32 ENSGT00940000154907.b.h.b #32 ENSGT00940000166491.a.a ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Three-toed box turtle MODERN SPECIES 41 AMOTL1 (ENSTMTG00000020714) CWC15 (ENSTMTG00000020776) ENDOD1 (ENSTMTG00000020781) SESN3 (ENSTMTG00000020784) FAM76B (ENSTMTG00000020789) #8 CEP57 (ENSTMTG00000020801) #9 MTMR2 (ENSTMTG00000020816) #10 MAML2 (ENSTMTG00000020833) #11 CCDC82 (ENSTMTG00000020843) #13 CNTN5 (ENSTMTG00000020897) #16 ARHGAP42 (ENSTMTG00000021206) #17 PGR (ENSTMTG00000021226) #18 TRPC6 (ENSTMTG00000006827) #19 ANGPTL5 (ENSTMTG00000006917) #20 CEP126 (ENSTMTG00000006950) #21 CFAP300 (ENSTMTG00000006981) #22 YAP1 (ENSTMTG00000007019) #23 ENSTMTG00000007041 #24 ENSTMTG00000007074 ##32 MMP27 (ENSTMTG00000007165) #29 Testudinidae ANCESTRAL SPECIES ENSGT00390000012084 ENSGT01030000234592.B.`b ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903 #27 ENSGT00940000154907.a.a ##32 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491.a.b ENSGT00940000166491.a.a ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b Goode s thornscrub tortoise MODERN SPECIES ENDOD1 (ENSGEVG00005007403) SESN3 (ENSGEVG00005007415) FAM76B (ENSGEVG00005007437) #8 CEP57 (ENSGEVG00005007470) #9 MTMR2 (ENSGEVG00005007507) #10 ENSGEVG00005007569 ENSGEVG00005007582 #11 ENSGEVG00005007596 #11 CCDC82 (ENSGEVG00005007622) #13 CNTN5 (ENSGEVG00005007749) #16 ARHGAP42 (ENSGEVG00005008027) #17 PGR (ENSGEVG00005008127) #18 TRPC6 (ENSGEVG00005008171) #19 ANGPTL5 (ENSGEVG00005008220) #20 CEP126 (ENSGEVG00005008250) #21 CFAP300 (ENSGEVG00005008286) #22 YAP1 (ENSGEVG00005008309) #23 ENSGEVG00005008335 #24 MMP7 (ENSGEVG00005008346) #27 MMP27 (ENSGEVG00005008369) #29 MMP1 (ENSGEVG00005008386) #32 ENSGEVG00005008403 ENSGEVG00005008434 ENSGEVG00005008551 ENSGEVG00005009550 MMP13 (ENSGEVG00005009634) #35 DCUN1D5 (ENSGEVG00005009736) #36 DYNC2H1 (ENSGEVG00005009816) #37 PDGFD (ENSGEVG00005010619) GRIA4 (ENSGEVG00005010983) MSANTD4 (ENSGEVG00005012006) Abingdon island giant tortoise MODERN SPECIES 2392 ANGPTL5 (ENSCABG00000022535) #20 CEP126 (ENSCABG00000022539) #21 CFAP300 (ENSCABG00000022541) #22 YAP1 (ENSCABG00000022544) #23 ENSCABG00000022549 #24 ENSCABG00000022553 #26 ENSCABG00000022554 ENSCABG00000022556 ##32 MMP27 (ENSCABG00000022557) #29 MMP1 (ENSCABG00000022558) #32 ENSCABG00000022559 Chinese turtle MODERN SPECIES 107 AGBL1 (ENSPSIG00000015379) KLHL25 (ENSPSIG00000015370) AKAP13 (ENSPSIG00000015102) SV2B (ENSPSIG00000014920) ENSPSIG00000014911 ARHGAP42 (ENSPSIG00000014150) #17 PGR (ENSPSIG00000013654) #18 TRPC6 (ENSPSIG00000012507) #19 ENSPSIG00000002035 ANGPTL5 (ENSPSIG00000012371) #20 CEP126 (ENSPSIG00000012355) #21 CFAP300 (ENSPSIG00000011841) #22 YAP1 (ENSPSIG00000010929) #23 ENSPSIG00000010553 #24 TMEM123 (ENSPSIG00000010379) #26 Lepidosauria ANCESTRAL SPECIES 17 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00940000175059 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a ##32 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 Episquamata ANCESTRAL SPECIES 2 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a.ic ##32 ENSGT00940000154907.a.a.jc ##32 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b Laterata ANCESTRAL SPECIES 3 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a.ic ##32 ENSGT00940000154907.a.a.jc ##32 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 24 AMOTL1 (ENSSMRG00000010190) CWC15 (ENSSMRG00000010192) ENDOD1 (ENSSMRG00000010205) SESN3 (ENSSMRG00000010206) FAM76B (ENSSMRG00000010211) #8 CEP57 (ENSSMRG00000010212) #9 MTMR2 (ENSSMRG00000010222) #10 MAML2 (ENSSMRG00000010230) #11 CCDC82 (ENSSMRG00000010232) #13 CNTN5 (ENSSMRG00000010264) #16 ARHGAP42 (ENSSMRG00000010680) #17 PGR (ENSSMRG00000010697) #18 TRPC6 (ENSSMRG00000010734) #19 ANGPTL5 (ENSSMRG00000010741) #20 ENSSMRG00000010744 #21 ENSSMRG00000010748 #22 YAP1 (ENSSMRG00000010770) #23 ENSSMRG00000010773 #24 ENSSMRG00000010775 #26 ENSSMRG00000010777 FDX1 (ENSSMRG00000010785) RDX (ENSSMRG00000010790) ZC3H12C (ENSSMRG00000010798) C11orf87 (ENSSMRG00000010849) DDX10 (ENSSMRG00000010887) ENSSMRG00000010889 POGLUT3 (ENSSMRG00000010901) C11orf65 (ENSSMRG00000010904) ATM (ENSSMRG00000010912) NPAT (ENSSMRG00000010937) ACAT1 (ENSSMRG00000010943) Argentine black and white tegu MODERN SPECIES 320 ENSSMRG00000000492 #22 Common wall lizard MODERN SPECIES 12 FAM76B (ENSPMRG00000008712) #8 CEP57 (ENSPMRG00000008718) #9 MTMR2 (ENSPMRG00000008721) #10 MAML2 (ENSPMRG00000008730) #11 ENSPMRG00000008736 CCDC82 (ENSPMRG00000008743) #13 ENSPMRG00000008746 CNTN5 (ENSPMRG00000008844) #16 ENSPMRG00000009362 ENSPMRG00000009363 ARHGAP42 (ENSPMRG00000009371) #17 PGR (ENSPMRG00000009404) #18 TRPC6 (ENSPMRG00000009410) #19 ANGPTL5 (ENSPMRG00000009416) #20 ENSPMRG00000009421 #21 CFAP300 (ENSPMRG00000009428) #22 YAP1 (ENSPMRG00000009439) #23 ENSPMRG00000009446 #24 ENSPMRG00000009452 #26 ENSPMRG00000009459 ##32 ENSPMRG00000009481 ##32 ENSPMRG00000009487 MMP20 (ENSPMRG00000009495) #28 MMP27 (ENSPMRG00000009561) #29 MMP1 (ENSPMRG00000009900) #32 ENSPMRG00000009929 ENSPMRG00000009956 ENSPMRG00000010059 MMP13 (ENSPMRG00000010064) #35 DCUN1D5 (ENSPMRG00000010069) #36 DYNC2H1 (ENSPMRG00000010165) #37 Toxicofera ANCESTRAL SPECIES 9 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a.ic ##32 ENSGT00940000154907.a.a.jc ##32 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b Elapidae ANCESTRAL SPECIES 10 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT01010000223591 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a.ic ##32 ENSGT00940000154907.a.a.jc ##32 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620.gc #37 ENSGT00940000159575 ENSGT00940000155677.b Indian cobra MODERN SPECIES 4 ENDOD1 (ENSNNAG00000003169) ENSNNAG00000003155 FAM76B (ENSNNAG00000003133) #8 CEP57 (ENSNNAG00000003119) #9 MTMR2 (ENSNNAG00000003100) #10 ENSNNAG00000003093 MAML2 (ENSNNAG00000003081) #11 CCDC82 (ENSNNAG00000012921) #13 ENSNNAG00000012902 CNTN5 (ENSNNAG00000012599) #16 ARHGAP42 (ENSNNAG00000012473) #17 PGR (ENSNNAG00000012172) #18 TRPC6 (ENSNNAG00000012027) #19 ANGPTL5 (ENSNNAG00000011981) #20 ENSNNAG00000011955 #21 CFAP300 (ENSNNAG00000011854) #22 YAP1 (ENSNNAG00000011815) #23 ENSNNAG00000011785 #24 TMEM123 (ENSNNAG00000011768) #26 ENSNNAG00000011741 ##32 MMP20 (ENSNNAG00000011646) #28 MMP27 (ENSNNAG00000011591) #29 MMP1 (ENSNNAG00000011567) #32 ENSNNAG00000011218 ENSNNAG00000011076 MMP13 (ENSNNAG00000011024) #35 ENSNNAG00000010976 #35 DCUN1D5 (ENSNNAG00000010943) #36 DYNC2H1 (ENSNNAG00000010349) #37 PDGFD (ENSNNAG00000010165) GRIA4 (ENSNNAG00000009267) Elapidae_a ANCESTRAL SPECIES 41 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a.ic ##32 ENSGT00940000154907.a.a.jc ##32 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620.fc #37 ENSGT00940000154620.gc #37 ENSGT00940000159575 Blue-lipped sea krait MODERN SPECIES 9666 CFAP300 (ENSLLTG00000015814) #22 Acanthophiinae ANCESTRAL SPECIES 42 ENSGT00940000160158 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.A ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000154907.a.a.ic ##32 ENSGT00940000154907.a.a.jc ##32 ENSGT00940000161277 #28 ENSGT00940000161159 #29 ENSGT00940000154907.b #32 ENSGT00940000166491 ENSGT00940000165562 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620.gc #37 ENSGT00940000159575 ENSGT00940000155677.b Mainland tiger snake MODERN SPECIES 75 CWC15 (ENSNSUG00000005774) ENSNSUG00000005775 SESN3 (ENSNSUG00000005777) FAM76B (ENSNSUG00000006019) #8 CEP57 (ENSNSUG00000006020) #9 MTMR2 (ENSNSUG00000006021) #10 MAML2 (ENSNSUG00000006022) #11 CCDC82 (ENSNSUG00000006023) #13 CNTN5 (ENSNSUG00000006024) #16 ARHGAP42 (ENSNSUG00000006025) #17 PGR (ENSNSUG00000006026) #18 TRPC6 (ENSNSUG00000006041) #19 ANGPTL5 (ENSNSUG00000006042) #20 ENSNSUG00000006043 ENSNSUG00000006044 #21 CFAP300 (ENSNSUG00000006047) #22 YAP1 (ENSNSUG00000006048) #23 ENSNSUG00000006049 #24 TMEM123 (ENSNSUG00000006089) #26 ENSNSUG00000006090 ##32 ENSNSUG00000006143 ##32 MMP20 (ENSNSUG00000006145) #28 MMP27 (ENSNSUG00000006147) #29 MMP1 (ENSNSUG00000006148) #32 ENSNSUG00000006288 MMP13 (ENSNSUG00000006375) #35 ENSNSUG00000006379 #35 DCUN1D5 (ENSNSUG00000006380) #36 DYNC2H1 (ENSNSUG00000006381) #37 PDGFD (ENSNSUG00000006385) GRIA4 (ENSNSUG00000006438) Eastern brown snake MODERN SPECIES 33 CWC15 (ENSPTXG00000004785) ENDOD1 (ENSPTXG00000004786) SESN3 (ENSPTXG00000004788) FAM76B (ENSPTXG00000004789) #8 CEP57 (ENSPTXG00000004793) #9 MTMR2 (ENSPTXG00000004795) #10 MAML2 (ENSPTXG00000004798) #11 CCDC82 (ENSPTXG00000004800) #13 ENSPTXG00000004802 CNTN5 (ENSPTXG00000004808) #16 ARHGAP42 (ENSPTXG00000004913) #17 PGR (ENSPTXG00000004915) #18 TRPC6 (ENSPTXG00000004918) #19 ANGPTL5 (ENSPTXG00000004951) #20 ENSPTXG00000004953 #21 CFAP300 (ENSPTXG00000004955) #22 YAP1 (ENSPTXG00000004962) #23 ENSPTXG00000004966 #24 TMEM123 (ENSPTXG00000004967) #26 ENSPTXG00000004969 ##32 ENSPTXG00000004971 ##32 MMP20 (ENSPTXG00000004974) #28 MMP27 (ENSPTXG00000004979) #29 MMP1 (ENSPTXG00000005037) #32 ENSPTXG00000005052 ENSPTXG00000005053 MMP13 (ENSPTXG00000005055) #35 ENSPTXG00000005057 #35 DCUN1D5 (ENSPTXG00000005058) #36 ENSPTXG00000005059 #37 ENSPTXG00000005060 #37 Lizard MODERN SPECIES 2 ENSACAG00000037709 ENSACAG00000007897 ENSACAG00000041554 CNTN5 (ENSACAG00000013104) #16 ENSACAG00000041932 ENSACAG00000038716 ENSACAG00000022852 ARHGAP42 (ENSACAG00000013753) #17 PGR (ENSACAG00000013594) #18 ENSACAG00000044869 TRPC6 (ENSACAG00000012822) #19 ENSACAG00000038711 ANGPTL5 (ENSACAG00000012817) #20 ENSACAG00000035329 ENSACAG00000012816 #21 CFAP300 (ENSACAG00000012802) #22 ENSACAG00000035332 YAP1 (ENSACAG00000012742) #23 ENSACAG00000012650 #24 ENSACAG00000012648 #26 ENSACAG00000012635 ENSACAG00000026401 ##32 MMP20 (ENSACAG00000021026) #28 MMP27 (ENSACAG00000025988) #29 ENSACAG00000040392 #32 ENSACAG00000012632 #32 ENSACAG00000012628 ENSACAG00000039814 ENSACAG00000023762 MMP13 (ENSACAG00000012443) #35 DCUN1D5 (ENSACAG00000012400) #36 tuatara MODERN SPECIES 964 CNTN5 (ENSSPUG00000014995) #16 ARHGAP42 (ENSSPUG00000015036) #17 ENSSPUG00000015069 PGR (ENSSPUG00000015094) #18 TRPC6 (ENSSPUG00000015206) #19 ANGPTL5 (ENSSPUG00000015487) #20 ENSSPUG00000015509 CFAP300 (ENSSPUG00000015520) #22 YAP1 (ENSSPUG00000015546) #23 ENSSPUG00000015558 #24 ENSSPUG00000015577 ENSSPUG00000015586 HEPHL1 (ENSSPUG00000015609) VSTM5 (ENSSPUG00000015648) MED17 (ENSSPUG00000015657) C11orf54 (ENSSPUG00000015667) ENSSPUG00000015747 ENSSPUG00000015805 SMCO4 (ENSSPUG00000015813) DEUP1 (ENSSPUG00000015835) ENSSPUG00000015933 MTNR1B (ENSSPUG00000015946) ENSSPUG00000015965 Anura ANCESTRAL SPECIES 28 ENSGT00390000012084 ENSGT01030000234592.B ENSGT00950000183168.D ENSGT00940000159074 #8 ENSGT00530000063695.a #9 ENSGT00940000153669.a #10 ENSGT00950000183201.a #11 ENSGT00940000175059 ENSGT00390000004986 #13 ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00940000160903.a #27 ENSGT00940000160903.b #27 ENSGT00940000161277 #28 ENSGT00940000165562 ENSGT00940000154907.b #32 ENSGT00940000157450 #35 ENSGT00940000156155 #36 ENSGT00940000154620 #37 ENSGT00940000159575 ENSGT00940000155677.b ENSGT00440000039469 ENSGT00940000158415 Frog MODERN SPECIES 2 fam76b (ENSXETG00000007080) #8 sesn3 (ENSXETG00000007079) endod1 (ENSXETG00000036422) cwc15 (ENSXETG00000007076) ENSXETG00000034471 maml2 (ENSXETG00000007075) #11 ccdc82 (ENSXETG00000007073) #13 cntn5 (ENSXETG00000005492) #16 ENSXETG00000034983 arhgap42 (ENSXETG00000005487) #17 ENSXETG00000042365 pgr (ENSXETG00000005482) #18 trpc6 (ENSXETG00000005481) #19 angptl5 (ENSXETG00000005480) #20 cep126 (ENSXETG00000032504) #21 cfap300 (ENSXETG00000022178) #22 yap1 (ENSXETG00000032689) #23 birc2 (ENSXETG00000022183) #24 ENSXETG00000049238 tmem123 (ENSXETG00000040034) #26 mmp3 (ENSXETG00000022185) #27 ENSXETG00000038461 #27 ENSXETG00000046841 #18 ENSXETG00000042404 #18 ENSXETG00000040194 #27 mmp13 (ENSXETG00000022190) #27 mmp20 (ENSXETG00000034187) #28 mmp8 (ENSXETG00000036861) ENSXETG00000031108 ENSXETG00000040632 mmp1 (ENSXETG00000022198) #32 Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000024649 ENSLLEG00000024623 ENSLLEG00000024605 ENSLLEG00000024465 CHORDC1 (ENSLLEG00000024190) ENSLLEG00000024032 ENSLLEG00000023931 NOX4 (ENSLLEG00000023660) TYR (ENSLLEG00000023613) GRM5 (ENSLLEG00000023527) CTSC (ENSLLEG00000023465) RAB38 (ENSLLEG00000023406) ENSLLEG00000023383 ENSLLEG00000023290 ENSLLEG00000022942 #21 CFAP300 (ENSLLEG00000022743) #22 YAP1 (ENSLLEG00000022186) #23 ENSLLEG00000022131 ENSLLEG00000022059 #24 ENSLLEG00000022032 TMEM123 (ENSLLEG00000021982) #26 ENSLLEG00000021721 #27 ENSLLEG00000021666 #27 ENSLLEG00000021383 #27 ENSLLEG00000021326 #27 MMP20 (ENSLLEG00000021181) #28 ENSLLEG00000021072 ENSLLEG00000020779 MMP1 (ENSLLEG00000020615) #32 MMP13 (ENSLLEG00000020531) #35 ENSLLEG00000020440 #35 Coelacanth MODERN SPECIES 2161 ENSLACG00000008985 #21 ENSLACG00000022481 CFAP300 (ENSLACG00000007889) #22 ENSLACG00000006290 #14 YAP1 (ENSLACG00000003343) #23 Actinopterygii ANCESTRAL SPECIES 5 ENSGT00940000156527 ENSGT00950000183068.a.b ENSGT00390000013087 ENSGT00940000155843 ENSGT00390000016589 ENSGT00520000055616.a ENSGT01030000234954 ENSGT00940000155156.b ENSGT00950000183204.a ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000047559 #22 ENSGT00510000046760.a #23 ENSGT00940000154175 #24 ENSGT00530000063929.b #26 ENSGT00950000183201.b.b.a ##11 ENSGT00910000148102 ENSGT00940000158694 ENSGT00940000160942 ENSGT00940000157792 ENSGT01030000234618.D ENSGT01030000234566.e.b.b.a ENSGT00940000154730.b ENSGT00980000198746 ENSGT00940000158099 ENSGT00940000165087 ENSGT00940000166008 Neopterygii ANCESTRAL SPECIES 54 ENSGT00950000183068.a.b ENSGT00390000013087 ENSGT00940000155843 ENSGT00390000016589 ENSGT00520000055616.a ENSGT01030000234954 ENSGT00940000155156.b ENSGT00950000183204.a ENSGT00940000158183 #16 ENSGT00940000155492.b #17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000046760.a.ab #23 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175 #24 ENSGT00950000183201.b.b.a ##11 ENSGT00910000148102 ENSGT00940000158694 ENSGT00940000160942 ENSGT00940000157792 ENSGT01030000234618.D ENSGT01030000234566.e.b.b.a ENSGT00940000154730.b ENSGT00980000198746 ENSGT00940000158099 ENSGT00940000165087 ENSGT00940000166008 ENSGT00940000156875 Osteoglossocephalai ANCESTRAL SPECIES 102 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 ENSGT00390000006949 ENSGT00980000198620 ENSGT00940000156933.d.a ENSGT00950000183204.a.b ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000046760.a.ab #23 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175 #24 Clupeocephala ANCESTRAL SPECIES 9 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 ENSGT00390000006949 ENSGT00980000198620 ENSGT00940000156933.d.a ENSGT00390000007968 ENSGT00950000183204.a.b ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00390000013786 #21 ENSGT00510000046760.a.ab #23 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175 #24 ENSGT00910000148102 ENSGT00940000158694 ENSGT00940000166008 Otomorpha ANCESTRAL SPECIES 20 ENSGT00940000159682 ENSGT00940000163088 ENSGT00940000168885 ENSGT00940000156933.d.b ENSGT00390000012429 ENSGT00940000163496.b.b.b ENSGT00940000163496.a ENSGT00390000014500 ENSGT00940000159828.a ENSGT00940000161091 ENSGT00940000161227 ENSGT00940000162143 ENSGT00950000183204.a.a.a.a ENSGT00950000183204.a.a.a.b ENSGT00940000155492.a.a ##17 ENSGT00510000047559 #22 ENSGT00940000154175 #24 ENSGT00940000158694 ENSGT00940000166008 ENSGT00440000034259.b ENSGT00940000155453 ENSGT00940000153733.A ENSGT00940000164751.b ENSGT00940000153997.b.a.b.c.b ENSGT01040000240444.A.a.a.a.a.b ENSGT01100000263536.A.b ENSGT00950000183202.b Otophysi ANCESTRAL SPECIES 36 ENSGT00670000099465 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 ENSGT00390000006949 ENSGT00980000198620 ENSGT00940000156933.d.a ENSGT00390000007968 ENSGT00950000183204.a.b ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00510000047559 #22 ENSGT00940000154175 #24 ENSGT00940000158694 ENSGT00940000166008 ENSGT00440000034259.b ENSGT00940000155453 ENSGT00940000153733.A ENSGT00940000164751.b ENSGT00940000153997.b.a.b.c.b ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a.b ENSGT01100000263536.A.b ENSGT00940000154943 ENSGT00390000016427 ENSGT01080000257365.b.a.a.a ENSGT00940000157670 Characiphysae ANCESTRAL SPECIES 12 ENSGT00990000203615.b.b.b.g.a.a.a.b ENSGT00990000203615.b.b.b.g.a.a.a.a ENSGT00990000203615.b.b.b.g.a.b ENSGT00990000203615.b.b.b.g.a.a.b ENSGT00940000165006 ENSGT00390000011517.a.b ENSGT00940000162662.z ENSGT00940000160033.c ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00940000166445 ENSGT00390000013374 ENSGT00730000111174 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00510000047559 #22 ENSGT00940000154175 #24 ENSGT00940000158694 ENSGT00940000166008 ENSGT00440000034259.b ENSGT00940000155453 ENSGT00940000153733.A ENSGT00940000164751.b ENSGT00940000153997.b.a.b.c.b ENSGT01100000263536.B.c.a.b ENSGT01040000240444.A.a.a.a.a.b ENSGT01100000263536.A.b ENSGT00950000183202.b ENSGT00940000154943 ENSGT00390000016427 ENSGT01080000257365.b.a.a.a Characiphysae_b ANCESTRAL SPECIES 6 ENSGT00990000203615.b.b.b.g.a.a.a.b ENSGT00990000203615.b.b.b.g.a.a.a.a ENSGT00990000203615.b.b.b.g.a.b ENSGT00990000203615.b.b.b.g.a.a.b ENSGT00940000165006 ENSGT00390000011517.a.b ENSGT00940000162662.z ENSGT00940000160033.c ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00940000166445 ENSGT00390000013374 ENSGT00730000111174 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00510000047559 #22 ENSGT00940000154175 #24 ENSGT00940000158694 ENSGT00940000166008 ENSGT00440000034259.b ENSGT00940000155453 ENSGT00940000153733.A ENSGT00940000164751.b ENSGT00940000153997.b.a.b.c.b ENSGT01100000263536.B.c.a.b ENSGT01040000240444.A.a.a.a.a.b ENSGT01100000263536.A.b ENSGT00950000183202.b ENSGT00940000154943 ENSGT00390000016427 ENSGT01080000257365.b.a.a.a Characoidei ANCESTRAL SPECIES 27 ENSGT00990000203615.b.b.b.g.a.a.a.b ENSGT00990000203615.b.b.b.g.a.a.a.a ENSGT00990000203615.b.b.b.g.a.b ENSGT00990000203615.b.b.b.g.a.a.b ENSGT00940000165006 ENSGT00390000011517.a.b ENSGT00940000162662.z ENSGT00940000160033.c ENSGT00390000012368 ENSGT00390000007046.b.a.b ENSGT00940000166445 ENSGT00390000013374 ENSGT00730000111174 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00510000047559 #22 ENSGT00940000154175 #24 ENSGT00940000158694 ENSGT00940000166008 ENSGT00440000034259.b ENSGT00940000155453 ENSGT00940000153733.A ENSGT00940000164751.b ENSGT00940000153997.b.a.b.c.b ENSGT01100000263536.B.c.a.b ENSGT01040000240444.A.a.a.a.a.b ENSGT01100000263536.A.b ENSGT00950000183202.b ENSGT00940000154943 ENSGT00390000016427 ENSGT01080000257365.b.a.a.a Red-bellied piranha MODERN SPECIES 370 arhgap42a (ENSPNAG00000014193) ##17 trpc6a (ENSPNAG00000014259) #19 ANGPTL5 (ENSPNAG00000014287) #20 cfap300 (ENSPNAG00000014300) #22 birc2 (ENSPNAG00000014317) #24 POLQ (ENSPNAG00000003089) ENSPNAG00000014361 pcf11 (ENSPNAG00000014379) ccdc90b (ENSPNAG00000003116) alg8 (ENSPNAG00000003127) guca1d (ENSPNAG00000003130) dub (ENSPNAG00000014477) CYSLTR2 (ENSPNAG00000003138) LPAR6 (ENSPNAG00000003141) ENSPNAG00000005740 rb1 (ENSPNAG00000005361) dlat (ENSPNAG00000003172) zw10 (ENSPNAG00000014615) ENSPNAG00000014691 Mexicana tetra MODERN SPECIES 5 ENSAMXG00000026111 ENSAMXG00000026038 ENSAMXG00000041087 ENSAMXG00000032512 ENSAMXG00000004144 ENSAMXG00000026110 bud13 (ENSAMXG00000004165) c1qb (ENSAMXG00000037125) c1qc (ENSAMXG00000004213) c1qa (ENSAMXG00000041621) fbxo40.1 (ENSAMXG00000004230) FBXO40 (ENSAMXG00000031912) arhgap42a (ENSAMXG00000004495) ##17 trpc6a (ENSAMXG00000004820) #19 ANGPTL5 (ENSAMXG00000035847) #20 cfap300 (ENSAMXG00000038229) #22 birc2 (ENSAMXG00000043147) #24 POLQ (ENSAMXG00000004839) ENSAMXG00000004947 pcf11 (ENSAMXG00000005004) ccdc90b (ENSAMXG00000005063) alg8 (ENSAMXG00000005112) guca1d (ENSAMXG00000043085) ENSAMXG00000037664 ENSAMXG00000026112 rb1 (ENSAMXG00000005363) LPAR6 (ENSAMXG00000040076) ENSAMXG00000026113 dlat (ENSAMXG00000036655) zw10 (ENSAMXG00000005695) ENSAMXG00000043324 Electric eel MODERN SPECIES 6 ENSEEEG00000004210 nectin1a (ENSEEEG00000004212) ENSEEEG00000004214 ENSEEEG00000004215 ENSEEEG00000004218 ENSEEEG00000004220 bud13 (ENSEEEG00000004223) ENSEEEG00000004224 c1qc (ENSEEEG00000004225) c1qa (ENSEEEG00000004227) fbxo40.1 (ENSEEEG00000004228) FBXO40 (ENSEEEG00000004230) arhgap42a (ENSEEEG00000004231) ##17 trpc6a (ENSEEEG00000004232) #19 ANGPTL5 (ENSEEEG00000004233) #20 cfap300 (ENSEEEG00000004234) #22 birc2 (ENSEEEG00000004235) #24 POLQ (ENSEEEG00000004242) ENSEEEG00000004243 pcf11 (ENSEEEG00000004244) ccdc90b (ENSEEEG00000004246) alg8 (ENSEEEG00000004248) dub (ENSEEEG00000004249) CYSLTR2 (ENSEEEG00000004250) rb1 (ENSEEEG00000004262) LPAR6 (ENSEEEG00000004422) ENSEEEG00000004423 dlat (ENSEEEG00000004425) zw10 (ENSEEEG00000004568) USP28 (ENSEEEG00000004576) HTR3B (ENSEEEG00000004579) Channel catfish MODERN SPECIES 9 ENSIPUG00000001582 nectin1a (ENSIPUG00000001540) ENSIPUG00000001534 ENSIPUG00000001531 gig2e (ENSIPUG00000001510) bud13 (ENSIPUG00000001490) C1QB (ENSIPUG00000001475) c1qc (ENSIPUG00000001469) c1qa (ENSIPUG00000001461) fbxo40.1 (ENSIPUG00000001440) FBXO40 (ENSIPUG00000001433) ENSIPUG00000001429 arhgap42 (ENSIPUG00000001267) ##17 trpc6 (ENSIPUG00000001201) #19 angptl5 (ENSIPUG00000001187) #20 cfap300 (ENSIPUG00000001133) #22 birc2 (ENSIPUG00000001086) #24 polq (ENSIPUG00000001045) ddias (ENSIPUG00000001035) pcf11 (ENSIPUG00000001010) ccdc90b (ENSIPUG00000000986) alg8 (ENSIPUG00000000949) guca1d (ENSIPUG00000000926) dub (ENSIPUG00000000922) CYSLTR2 (ENSIPUG00000000920) LPAR6 (ENSIPUG00000000915) ENSIPUG00000000892 rb1 (ENSIPUG00000000847) dlat (ENSIPUG00000000824) ZW10 (ENSIPUG00000000809) usp28 (ENSIPUG00000000801) Cyprinoidei ANCESTRAL SPECIES 12 ENSGT00940000158740 ENSGT00940000157114 ENSGT00730000110915.a ENSGT01050000244848.B.a.a ENSGT00900000141067 ENSGT00390000006949 ENSGT00980000198620 ENSGT00940000156933.d.a.a ENSGT00390000007968 ENSGT00950000183204.a.b ENSGT00940000158183 #16 ENSGT00940000155492.a.b ##17 ENSGT00940000159713 #18 ENSGT01060000248588.a.d.a #19 ENSGT00940000161966 #20 ENSGT00510000047559 #22 ENSGT00940000154175 #24 ENSGT00940000158694 ENSGT00940000166008 ENSGT00440000034259.b ENSGT00940000155453.db ENSGT00940000153733.A ENSGT00940000164751.b ENSGT00940000153997.b.a.b.c.b ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a.b ENSGT01100000263536.A.b ENSGT00940000154943 ENSGT00390000016427 ENSGT00940000157670 ENSGT00940000158478 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 377 ENSGT00950000183204.a.a.a.b ENSGT00940000155492.a.a.a ##17 ENSGT01060000248588.a.d.a.h.b.b #19 ENSGT00940000161966.a #20 ENSGT00510000047559.e #22 ENSGT00940000154175.a #24 ENSGT00940000158694 ENSGT00940000166008.b ENSGT00440000034259.b.d ENSGT00940000155453.cb ENSGT00940000153733.A.i ENSGT00940000164751.b.a ENSGT00940000153997.b.a.b.c.b.a ENSGT00950000183202.b.c ENSGT01040000240444.A.a.a.a.a.b.e ENSGT00940000154943.ab ENSGT00390000016427.d ENSGT00940000157670.d ENSGT00940000158478.i.a.a ENSGT00940000157705.c Goldfish MODERN SPECIES 13 nadk2 (ENSCARG00000070436) skp2 (ENSCARG00000070435) lmbrd2b (ENSCARG00000070420) capslb (ENSCARG00000070418) il7r (ENSCARG00000070416) myo5b (ENSCARG00000070339) chek1 (ENSCARG00000070315) ENSCARG00000070312 nectin1a (ENSCARG00000070310) ENSCARG00000070309 gig2d (ENSCARG00000070308) FBXO40 (ENSCARG00000070307) arhgap42a (ENSCARG00000070194) ##17 trpc6a (ENSCARG00000070159) #19 ANGPTL5 (ENSCARG00000070156) #20 cfap300 (ENSCARG00000070153) #22 birc2 (ENSCARG00000070148) #24 POLQ (ENSCARG00000070135) ENSCARG00000070133 pcf11 (ENSCARG00000070130) alg8 (ENSCARG00000070119) guca1d (ENSCARG00000070112) ENSCARG00000070110 ENSCARG00000070108 LPAR6 (ENSCARG00000070107) rb1 (ENSCARG00000069995) dlat (ENSCARG00000069949) zw10 (ENSCARG00000069904) USP28 (ENSCARG00000069754) HTR3B (ENSCARG00000069658) HTR3A (ENSCARG00000069649) Cyprininae_a ANCESTRAL SPECIES 33 ENSGT00940000156466.eb ENSGT00990000204705.b ENSGT00940000155402.a.b.e.a ENSGT00970000193642 ENSGT00940000159682.j ENSGT01100000263551.b.b.a.g.a ENSGT00940000159682.i ENSGT00940000163088.a.b ENSGT00940000168885.d ENSGT00940000156933.d.b.a ENSGT00390000012352.b.b ENSGT00950000183204.a.a.a.b ENSGT00940000155492.a.a.a ##17 ENSGT01060000248588.a.d.a.h.b.b #19 ENSGT00940000161966.a #20 ENSGT00510000047559.e #22 ENSGT00940000154175.a #24 ENSGT00940000158694 ENSGT00940000165087 ENSGT00440000034259.b.d ENSGT00940000155453.cb ENSGT00940000153733.A.i ENSGT00940000164751.b.a ENSGT00940000153997.b.a.b.c.b.a ENSGT00950000183202.b.c ENSGT01040000240444.A.a.a.a.a.b.e ENSGT00940000154943.ab ENSGT00390000016427.d ENSGT00940000157670.d ENSGT00940000158478.i.a.a ENSGT00940000157705.c Common carp reference MODERN SPECIES 45 capslb (ENSCCRG00000061757) il7r (ENSCCRG00000056341) ENSCCRG00000055703 myo5b (ENSCCRG00000012479) cfap53 (ENSCCRG00000046091) chek1 (ENSCCRG00000046093) ENSCCRG00000046101 ENSCCRG00000074979 nectin1a (ENSCCRG00000077224) ENSCCRG00000022753 ENSCCRG00000077804 ENSCCRG00000043406 arhgap42a (ENSCCRG00000020821) ##17 trpc6a (ENSCCRG00000046506) #19 ANGPTL5 (ENSCCRG00000049833) #20 cfap300 (ENSCCRG00000072950) #22 birc2 (ENSCCRG00000004278) #24 ENSCCRG00000036970 pcf11 (ENSCCRG00000036946) ENSCCRG00000036935 alg8 (ENSCCRG00000036932) guca1d (ENSCCRG00000005200) dub (ENSCCRG00000066830) rb1 (ENSCCRG00000032593) ENSCCRG00000058142 ENSCCRG00000032653 dlat (ENSCCRG00000059009) zw10 (ENSCCRG00000032581) USP28 (ENSCCRG00000045457) HTR3B (ENSCCRG00000050507) HTR3A (ENSCCRG00000081399) Golden-line barbel MODERN SPECIES 343 myo5b (ENSSGRG00000048632) ENSSGRG00000048676 chek1 (ENSSGRG00000048677) ENSSGRG00000048679 nectin1a (ENSSGRG00000048683) ENSSGRG00000048684 gig2l (ENSSGRG00000048685) ENSSGRG00000048687 c1qc (ENSSGRG00000048688) c1qa (ENSSGRG00000048699) FBXO40 (ENSSGRG00000048701) ENSSGRG00000048702 ##17 arhgap42a (ENSSGRG00000048706) ##17 trpc6a (ENSSGRG00000048709) #19 ANGPTL5 (ENSSGRG00000048711) #20 cfap300 (ENSSGRG00000048712) #22 birc2 (ENSSGRG00000048713) #24 POLQ (ENSSGRG00000048770) ENSSGRG00000048848 pcf11 (ENSSGRG00000048850) ccdc90b (ENSSGRG00000048851) alg8 (ENSSGRG00000048854) guca1d (ENSSGRG00000049019) dub (ENSSGRG00000049020) ENSSGRG00000049023 rb1 (ENSSGRG00000049033) LPAR6 (ENSSGRG00000049151) ENSSGRG00000049152 zw10 (ENSSGRG00000049154) USP28 (ENSSGRG00000049157) HTR3B (ENSSGRG00000049233) Cyprininae ANCESTRAL SPECIES 201 ENSGT00940000163496.a.j.a.a ENSGT00940000156933.d.b.b ENSGT00390000012352.b ENSGT00940000163496.a.j.b.a.a.b ENSGT00940000163496.a.j.b.b ENSGT00390000012429 ENSGT00940000163496.a.j.a.b ENSGT00390000014500 ENSGT00940000159828.a ENSGT00940000161227.a ENSGT00940000162143.i ENSGT00950000183204.a.a.a.a ENSGT00940000155492.a.a.b ##17 ENSGT01060000248588.a.d.a.h.b.a #19 ENSGT00940000161966.b #20 ENSGT00510000047559.f #22 ENSGT00940000154175.b #24 ENSGT00940000166008.a ENSGT00440000034259.b.c ENSGT00940000155453.db ENSGT00940000153733.A.j ENSGT00940000164751.b.b ENSGT00940000153997.b.a.b.c.b.b ENSGT00990000203619.B.a.b.c ENSGT00950000183202.b.d ENSGT01040000240444.A.a.a.a.a.b.f ENSGT01100000263536.A.b ENSGT00940000154943.`b ENSGT00390000016427.c ENSGT00940000157670.c ENSGT00940000158478.j Cyprininae_a ANCESTRAL SPECIES 324 ENSGT00940000156933.d.b.b ENSGT00390000012352.b.a ENSGT00940000163496.a.j.b.a.b ENSGT00940000163496.b.b.b ENSGT00940000163496.a.j.b.a.a.b ENSGT00940000163496.a.j.b.b ENSGT00940000163496.a.j.a.b ENSGT00390000014500 ENSGT00940000159828.a ENSGT00940000161227.a ENSGT00940000162143.i ENSGT00950000183204.a.a.a.a ENSGT00940000155492.a.a.b ##17 ENSGT01060000248588.a.d.a.h.b.a #19 ENSGT00940000161966.b #20 ENSGT00510000047559.f #22 ENSGT00940000154175.b #24 ENSGT00940000166008.a ENSGT00440000034259.b.c ENSGT00940000155453.db ENSGT00940000153733.A.j ENSGT00940000164751.b.b ENSGT00940000153997.b.a.b.c.b.b ENSGT00990000203619.B.a.b.c ENSGT00950000183202.b.d ENSGT01040000240444.A.a.a.a.a.b.f ENSGT01100000263536.A.b ENSGT00940000154943.`b ENSGT00390000016427.c ENSGT00940000157670.c ENSGT00940000158478.i.b Common carp reference MODERN SPECIES 38 il7r (ENSCCRG00000063390) myo5b (ENSCCRG00000050749) ENSCCRG00000070030 nectin1a (ENSCCRG00000022764) ENSCCRG00000046117 gig2f (ENSCCRG00000022747) ENSCCRG00000022745 gig2l (ENSCCRG00000022739) gig2j (ENSCCRG00000062495) bud13 (ENSCCRG00000022727) c1qb (ENSCCRG00000074279) fbxo40.1 (ENSCCRG00000022682) arhgap42a (ENSCCRG00000020791) ##17 trpc6a (ENSCCRG00000019838) #19 ANGPTL5 (ENSCCRG00000019876) #20 cfap300 (ENSCCRG00000005130) #22 birc2 (ENSCCRG00000044041) #24 ENSCCRG00000044050 pcf11 (ENSCCRG00000044052) ccdc90b (ENSCCRG00000044054) alg8 (ENSCCRG00000044063) guca1d (ENSCCRG00000044506) dub (ENSCCRG00000044511) ENSCCRG00000080412 ENSCCRG00000071359 rb1 (ENSCCRG00000044544) dlat (ENSCCRG00000044661) zw10 (ENSCCRG00000044688) USP28 (ENSCCRG00000013519) HTR3B (ENSCCRG00000017340) ENSCCRG00000077128 Zebrafish MODERN SPECIES 13 gig2h (ENSDARG00000103444) gig2g (ENSDARG00000098463) gig2f (ENSDARG00000099735) gig2e (ENSDARG00000075757) gig2d (ENSDARG00000098772) bud13 (ENSDARG00000006666) ENSDARG00000091888 c1qb (ENSDARG00000044612) c1qc (ENSDARG00000095627) c1qa (ENSDARG00000044613) fbxo40.1 (ENSDARG00000069775) FBXO40 (ENSDARG00000091119) arhgap42a (ENSDARG00000056619) ##17 trpc6a (ENSDARG00000056625) #19 ANGPTL5 (ENSDARG00000056630) #20 cfap300 (ENSDARG00000000349) #22 birc2 (ENSDARG00000044619) #24 POLQ (ENSDARG00000044622) ENSDARG00000088690 pcf11 (ENSDARG00000044625) ccdc90b (ENSDARG00000044626) alg8 (ENSDARG00000044627) guca1d (ENSDARG00000044629) dub (ENSDARG00000059774) rb1 (ENSDARG00000006782) LPAR6 (ENSDARG00000069441) dlat (ENSDARG00000015918) zw10 (ENSDARG00000018738) USP28 (ENSDARG00000008880) HTR3B (ENSDARG00000061749) HTR3A (ENSDARG00000089212) Clupeiformes ANCESTRAL SPECIES 18 ENSGT00740000117097 ENSGT00950000182903.b.b.p ENSGT00940000159682 ENSGT00940000168885 ENSGT01100000263551.b.b.a ENSGT00940000156933.d.b ENSGT00390000012429 ENSGT00390000014500 ENSGT00940000161091 ENSGT00940000161227 ENSGT00940000162143 ENSGT00950000183204.a.a.a.a ENSGT00950000183204.a.a.a.b ENSGT00940000155492.a.a ##17 ENSGT00940000161966 #20 ENSGT00510000047559 #22 ENSGT00940000154175 #24 ENSGT00940000158694 ENSGT00940000166008 ENSGT00440000034259.b ENSGT00940000154216.a ENSGT00940000155453 ENSGT00940000153733.A ENSGT00940000164751.b ENSGT00940000153997.b.a.b.c.b ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a.b ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00990000214195 ENSGT00940000175813 Atlantic herring MODERN SPECIES 24 ENSCHAG00000026563 ENSCHAG00000026558 nectin1a (ENSCHAG00000026555) ENSCHAG00000026551 gig2p (ENSCHAG00000026547) ENSCHAG00000026546 ENSCHAG00000026543 bud13 (ENSCHAG00000026540) ENSCHAG00000026535 c1qa (ENSCHAG00000026531) fbxo40.1 (ENSCHAG00000026529) FBXO40 (ENSCHAG00000026526) arhgap42a (ENSCHAG00000026472) ##17 trpc6a (ENSCHAG00000026353) #19 ANGPTL5 (ENSCHAG00000026333) #20 cfap300 (ENSCHAG00000026330) #22 birc2 (ENSCHAG00000026319) #24 POLQ (ENSCHAG00000026216) ENSCHAG00000026205 ENSCHAG00000026198 slc22a21 (ENSCHAG00000026195) ENSCHAG00000026170 irf1b (ENSCHAG00000026167) ENSCHAG00000025735 fnip1 (ENSCHAG00000025673) RAPGEF6 (ENSCHAG00000024774) ENSCHAG00000024712 fstl4 (ENSCHAG00000024157) C5orf15 (ENSCHAG00000024136) vdac1 (ENSCHAG00000023980) tcf7 (ENSCHAG00000023937) Euteleosteomorpha ANCESTRAL SPECIES 329 ENSGT00940000155492.a.a ##17 ENSGT01060000248588.a.d.b ##19 ENSGT00940000161966 #20 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175 #24 ENSGT00910000148102 ENSGT00940000158694 ENSGT00940000166008 Acanthomorphata ANCESTRAL SPECIES 55 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 Carangaria ANCESTRAL SPECIES 14 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Turbot MODERN SPECIES 14 fam91a1 (ENSSMAG00000008966) lratd2a (ENSSMAG00000009009) ENSSMAG00000021701 cibar1 (ENSSMAG00000009032) ENSSMAG00000028041 runx1t1 (ENSSMAG00000009153) otud6b (ENSSMAG00000009196) RAB5A (ENSSMAG00000009229) ENSSMAG00000009616 ENSSMAG00000009694 ZNF385D (ENSSMAG00000009709) ENSSMAG00000035677 ENSSMAG00000009738 ENSSMAG00000009791 ENSSMAG00000009811 ENSSMAG00000009852 #22 ENSSMAG00000009872 ENSSMAG00000009905 ENSSMAG00000009961 ENSSMAG00000010001 ubp1 (ENSSMAG00000010036) clasp2 (ENSSMAG00000010193) fbxl2 (ENSSMAG00000010521) ENSSMAG00000010596 crtap (ENSSMAG00000010631) fkbp9 (ENSSMAG00000010666) pdcd6ip (ENSSMAG00000010694) ENSSMAG00000010735 cyhr1 (ENSSMAG00000010771) ENSSMAG00000010800 fabp3 (ENSSMAG00000026107) Tongue sole MODERN SPECIES 9 ENSCSEG00000016146 cyhr1 (ENSCSEG00000016245) pdcd6ip (ENSCSEG00000016266) ubp1 (ENSCSEG00000016364) clasp2 (ENSCSEG00000016910) ENSCSEG00000016948 fbxl2 (ENSCSEG00000016957) kat2b (ENSCSEG00000016972) ENSCSEG00000016989 ENSCSEG00000017005 rab25a (ENSCSEG00000017026) UBQLN4 (ENSCSEG00000017036) ENSCSEG00000017082 lim2.4 (ENSCSEG00000017089) TINAGL1 (ENSCSEG00000017097) cfap300 (ENSCSEG00000017145) #22 KCNQ4 (ENSCSEG00000017158) nfyc (ENSCSEG00000017202) ENSCSEG00000017220 RPRD1A (ENSCSEG00000017232) fkbp9 (ENSCSEG00000017244) crtap (ENSCSEG00000017274) ENSCSEG00000017301 laptm4b (ENSCSEG00000017317) rpl30 (ENSCSEG00000017333) RIDA (ENSCSEG00000017340) stk3 (ENSCSEG00000017359) polr2k (ENSCSEG00000017377) tdp2b (ENSCSEG00000017383) acot13 (ENSCSEG00000017397) zgc:111986 (ENSCSEG00000017406) Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT01030000234950 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 Barramundi perch MODERN SPECIES 163 ENSLCAG00010009678 ENSLCAG00010009664 ENSLCAG00010009655 ENSLCAG00010009645 rab25a (ENSLCAG00010009636) UBQLN4 (ENSLCAG00010009627) lim2.4 (ENSLCAG00010009621) TINAGL1 (ENSLCAG00010009612) cfap300 (ENSLCAG00010009599) #22 KCNQ4 (ENSLCAG00010009592) nfyc (ENSLCAG00010009584) ENSLCAG00010009576 RPRD1A (ENSLCAG00010009573) fkbp9 (ENSLCAG00010009525) crtap (ENSLCAG00010009497) ENSLCAG00010009488 fbxl2 (ENSLCAG00010009485) clasp2 (ENSLCAG00010008731) ubp1 (ENSLCAG00010008477) pdcd6ip (ENSLCAG00010008358) ENSLCAG00010008314 cyhr1 (ENSLCAG00010008295) ENSLCAG00010008219 fabp3 (ENSLCAG00010008193) Seriola ANCESTRAL SPECIES 12 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT01030000234950 ENSGT00950000183176.b.f ENSGT00940000181982 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT01100000263710 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 Greater amberjack MODERN SPECIES 48 lratd2a (ENSSDUG00000010026) TRIB1 (ENSSDUG00000010011) cibar1 (ENSSDUG00000009987) ENSSDUG00000009978 runx1t1 (ENSSDUG00000009928) ENSSDUG00000009886 otud6b (ENSSDUG00000009860) RAB5A (ENSSDUG00000009835) kat2b (ENSSDUG00000009787) ENSSDUG00000009765 ZNF385D (ENSSDUG00000009750) rab25a (ENSSDUG00000009735) UBQLN4 (ENSSDUG00000009691) lim2.4 (ENSSDUG00000009670) TINAGL1 (ENSSDUG00000009649) cfap300 (ENSSDUG00000009628) #22 ENSSDUG00000009618 KCNQ4 (ENSSDUG00000009542) nfyc (ENSSDUG00000009492) ENSSDUG00000009470 RPRD1A (ENSSDUG00000009440) fkbp9 (ENSSDUG00000009427) crtap (ENSSDUG00000009411) ENSSDUG00000009403 fbxl2 (ENSSDUG00000009383) ENSSDUG00000009369 clasp2 (ENSSDUG00000009311) ubp1 (ENSSDUG00000009258) ENSSDUG00000009214 ENSSDUG00000009188 cyhr1 (ENSSDUG00000009157) Yellowtail amberjack MODERN SPECIES 2890 lratd2a (ENSSLDG00000011397) TRIB1 (ENSSLDG00000011384) cibar1 (ENSSLDG00000011251) ENSSLDG00000011209 runx1t1 (ENSSLDG00000011172) ENSSLDG00000011146 otud6b (ENSSLDG00000011101) RAB5A (ENSSLDG00000011069) kat2b (ENSSLDG00000010977) ENSSLDG00000010937 ZNF385D (ENSSLDG00000010909) rab25a (ENSSLDG00000010880) UBQLN4 (ENSSLDG00000010839) lim2.4 (ENSSLDG00000010807) TINAGL1 (ENSSLDG00000010762) cfap300 (ENSSLDG00000010739) #22 KCNQ4 (ENSSLDG00000010705) nfyc (ENSSLDG00000010606) ENSSLDG00000010572 RPRD1A (ENSSLDG00000010537) fkbp9 (ENSSLDG00000010478) crtap (ENSSLDG00000010447) ENSSLDG00000010419 fbxl2 (ENSSLDG00000010355) ENSSLDG00000010321 clasp2 (ENSSLDG00000010239) ubp1 (ENSSLDG00000010188) ENSSLDG00000010078 ENSSLDG00000010034 cyhr1 (ENSSLDG00000009992) ENSSLDG00000009980 Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Climbing perch MODERN SPECIES 2 lratd2a (ENSATEG00000014651) ENSATEG00000014664 cibar1 (ENSATEG00000014669) triqk (ENSATEG00000014685) runx1t1 (ENSATEG00000014697) ENSATEG00000014729 otud6b (ENSATEG00000014744) RAB5A (ENSATEG00000014748) ENSATEG00000014763 ENSATEG00000014815 ZNF385D (ENSATEG00000014843) ENSATEG00000014851 ENSATEG00000014859 ENSATEG00000025250 ENSATEG00000014922 ENSATEG00000014937 #22 ENSATEG00000015023 ENSATEG00000015095 ENSATEG00000015157 ENSATEG00000015171 fkbp9 (ENSATEG00000015195) crtap (ENSATEG00000015226) ENSATEG00000029627 fbxl2 (ENSATEG00000015310) clasp2 (ENSATEG00000015363) ubp1 (ENSATEG00000015444) pdcd6ip (ENSATEG00000015499) ENSATEG00000015519 cyhr1 (ENSATEG00000015544) ENSATEG00000028692 fabp3 (ENSATEG00000015920) Siamese fighting fish MODERN SPECIES 2 fam91a1 (ENSBSLG00000010874) lratd2a (ENSBSLG00000010697) TRIB1 (ENSBSLG00000010679) cibar1 (ENSBSLG00000010613) triqk (ENSBSLG00000010252) runx1t1 (ENSBSLG00000009107) otud6b (ENSBSLG00000008994) RAB5A (ENSBSLG00000008904) kat2b (ENSBSLG00000008678) ENSBSLG00000008658 ZNF385D (ENSBSLG00000008655) rab25a (ENSBSLG00000008617) UBQLN4 (ENSBSLG00000008535) LIM2 (ENSBSLG00000008519) TINAGL1 (ENSBSLG00000008337) cfap300 (ENSBSLG00000025795) #22 KCNQ4 (ENSBSLG00000025742) nfyc (ENSBSLG00000025658) RPRD1A (ENSBSLG00000025634) fkbp9 (ENSBSLG00000025558) crtap (ENSBSLG00000025539) ENSBSLG00000025522 fbxl2 (ENSBSLG00000025439) clasp2 (ENSBSLG00000022768) ubp1 (ENSBSLG00000022132) pdcd6ip (ENSBSLG00000021280) ENSBSLG00000020316 ENSBSLG00000020306 cyhr1 (ENSBSLG00000020292) ENSBSLG00000020135 fabp3 (ENSBSLG00000020056) Zig-zag eel MODERN SPECIES 2 lratd2a (ENSMAMG00000012706) ENSMAMG00000012697 cibar1 (ENSMAMG00000012674) triqk (ENSMAMG00000012671) runx1t1 (ENSMAMG00000012649) ENSMAMG00000012594 otud6b (ENSMAMG00000012583) RAB5A (ENSMAMG00000012573) KAT2B (ENSMAMG00000012530) ENSMAMG00000012524 ZNF385D (ENSMAMG00000012483) ENSMAMG00000012471 ENSMAMG00000012446 ENSMAMG00000012425 ENSMAMG00000012384 ENSMAMG00000012366 #22 ENSMAMG00000012339 ENSMAMG00000012280 ENSMAMG00000012247 fkbp9 (ENSMAMG00000012223) crtap (ENSMAMG00000012213) ENSMAMG00000012197 fbxl2 (ENSMAMG00000012170) clasp2 (ENSMAMG00000011902) ubp1 (ENSMAMG00000011804) pdcd6ip (ENSMAMG00000011771) ENSMAMG00000011755 cyhr1 (ENSMAMG00000011735) ENSMAMG00000011727 fabp3 (ENSMAMG00000026283) zcchc17 (ENSMAMG00000011701) Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00390000012138.a.b.d ENSGT00940000153446.a.a.w.b ENSGT00940000174923 ENSGT00390000013305.a.b ENSGT00390000006790.b ENSGT00950000183211.a.b.b ENSGT00940000159220.d ENSGT00940000156479.b ENSGT00940000156206.e ENSGT00940000156595 ENSGT00390000005939.a.a.a ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000173087 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Fugu MODERN SPECIES 3 laptm4b (ENSTRUG00000014937) ENSTRUG00000014877 rrm2b (ENSTRUG00000014830) bloc1s4 (ENSTRUG00000014823) pard6gb (ENSTRUG00000022301) jarid2b (ENSTRUG00000020124) dtnbp1b (ENSTRUG00000014742) ENSTRUG00000030958 mylipa (ENSTRUG00000014716) gmpr (ENSTRUG00000014659) atxn1a (ENSTRUG00000014645) ENSTRUG00000014595 UBQLN4 (ENSTRUG00000014502) LIM2 (ENSTRUG00000020756) tinagl1 (ENSTRUG00000014431) cfap300 (ENSTRUG00000014398) #22 KCNQ4 (ENSTRUG00000014313) nfyc (ENSTRUG00000014244) ENSTRUG00000023414 RPRD1A (ENSTRUG00000014193) fkbp9 (ENSTRUG00000014068) crtap (ENSTRUG00000014024) ENSTRUG00000020342 fbxl2 (ENSTRUG00000013949) clasp2 (ENSTRUG00000013726) ubp1 (ENSTRUG00000013570) pdcd6ip (ENSTRUG00000013431) ENSTRUG00000013414 cyhr1 (ENSTRUG00000013359) ENSTRUG00000025961 fabp3 (ENSTRUG00000022364) Tetraodon MODERN SPECIES 15 stk3 (ENSTNIG00000009144) ENSTNIG00000009143 rpl30 (ENSTNIG00000000339) laptm4b (ENSTNIG00000006749) ENSTNIG00000001419 rrm2b (ENSTNIG00000006748) bloc1s4 (ENSTNIG00000006747) pard6gb (ENSTNIG00000000717) mylipa (ENSTNIG00000005087) gmpr (ENSTNIG00000005088) atxn1a (ENSTNIG00000005089) rab25a (ENSTNIG00000005090) UBQLN4 (ENSTNIG00000005091) lim2.4 (ENSTNIG00000005092) TINAGL1 (ENSTNIG00000005093) cfap300 (ENSTNIG00000003181) #22 ENSTNIG00000000586 KCNQ4 (ENSTNIG00000003182) nfyc (ENSTNIG00000016968) RPRD1A (ENSTNIG00000016969) fkbp9 (ENSTNIG00000016970) crtap (ENSTNIG00000016971) ENSTNIG00000000051 fbxl2 (ENSTNIG00000016972) clasp2 (ENSTNIG00000016973) ubp1 (ENSTNIG00000016974) pdcd6ip (ENSTNIG00000016975) ENSTNIG00000016976 cyhr1 (ENSTNIG00000016977) ENSTNIG00000016978 fabp3 (ENSTNIG00000016979) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Ballan wrasse MODERN SPECIES 539 runx1t1 (ENSLBEG00000002616) ENSLBEG00000002570 ENSLBEG00000002543 RAB5A (ENSLBEG00000002516) kat2b (ENSLBEG00000002439) ENSLBEG00000002405 ZNF385D (ENSLBEG00000002390) rab25a (ENSLBEG00000002367) UBQLN4 (ENSLBEG00000002320) LIM2 (ENSLBEG00000002300) TINAGL1 (ENSLBEG00000002245) cfap300 (ENSLBEG00000002224) #22 KCNQ4 (ENSLBEG00000002107) nfyc (ENSLBEG00000001936) Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Large yellow croaker MODERN SPECIES 484 lratd2a (ENSLCRG00005018326) TRIB1 (ENSLCRG00005018322) cibar1 (ENSLCRG00005018310) ENSLCRG00005018296 runx1t1 (ENSLCRG00005017684) ENSLCRG00005017619 otud6b (ENSLCRG00005017614) RAB5A (ENSLCRG00005017604) kat2b (ENSLCRG00005016958) ENSLCRG00005016859 ZNF385D (ENSLCRG00005016858) rab25a (ENSLCRG00005016847) UBQLN4 (ENSLCRG00005016844) LIM2 (ENSLCRG00005016837) TINAGL1 (ENSLCRG00005016804) cfap300 (ENSLCRG00005016793) #22 KCNQ4 (ENSLCRG00005016017) nfyc (ENSLCRG00005015798) ENSLCRG00005015764 ENSLCRG00005015755 ENSLCRG00005015754 fkbp9 (ENSLCRG00005015690) crtap (ENSLCRG00005015650) ENSLCRG00005015641 fbxl2 (ENSLCRG00005015042) clasp2 (ENSLCRG00005011275) ubp1 (ENSLCRG00005010163) pdcd6ip (ENSLCRG00005010076) ENSLCRG00005010047 cyhr1 (ENSLCRG00005010045) ENSLCRG00005009725 European seabass MODERN SPECIES 22 fam91a1 (ENSDLAG00005016720) lratd2a (ENSDLAG00005032677) ENSDLAG00005034184 cibar1 (ENSDLAG00005018773) triqk (ENSDLAG00005016668) runx1t1 (ENSDLAG00005016462) ENSDLAG00005016437 otud6b (ENSDLAG00005016415) RAB5A (ENSDLAG00005031711) KAT2B (ENSDLAG00005015891) ENSDLAG00005015862 ZNF385D (ENSDLAG00005015849) ENSDLAG00005015739 ENSDLAG00005015815 ENSDLAG00005015687 ENSDLAG00005015683 #22 ENSDLAG00005015234 ENSDLAG00005015069 ENSDLAG00005033520 fkbp9 (ENSDLAG00005014859) crtap (ENSDLAG00005030248) ENSDLAG00005035072 fbxl2 (ENSDLAG00005014392) clasp2 (ENSDLAG00005010646) ubp1 (ENSDLAG00005009655) pdcd6ip (ENSDLAG00005008436) ENSDLAG00005008391 cyhr1 (ENSDLAG00005034723) ENSDLAG00005008192 fabp3 (ENSDLAG00005008171) zcchc17 (ENSDLAG00005030970) Gilthead seabream MODERN SPECIES 17 lratd2a (ENSSAUG00010008954) TRIB1 (ENSSAUG00010008959) cibar1 (ENSSAUG00010008960) ENSSAUG00010008961 runx1t1 (ENSSAUG00010008971) ENSSAUG00010009037 otud6b (ENSSAUG00010009048) RAB5A (ENSSAUG00010009052) kat2b (ENSSAUG00010009062) ENSSAUG00010009067 ZNF385D (ENSSAUG00010009072) rab25a (ENSSAUG00010009077) UBQLN4 (ENSSAUG00010009085) LIM2 (ENSSAUG00010009090) tinagl1 (ENSSAUG00010009103) cfap300 (ENSSAUG00010009123) #22 KCNQ4 (ENSSAUG00010009139) nfyc (ENSSAUG00010009601) ENSSAUG00010009647 RPRD1A (ENSSAUG00010000139) fkbp9 (ENSSAUG00010000230) crtap (ENSSAUG00010000356) ENSSAUG00010000362 fbxl2 (ENSSAUG00010000374) clasp2 (ENSSAUG00010000585) ubp1 (ENSSAUG00010002759) pdcd6ip (ENSSAUG00010002858) ENSSAUG00010004265 cyhr1 (ENSSAUG00010004297) ENSSAUG00010004335 H-FABP (ENSSAUG00010004679) Perciformes ANCESTRAL SPECIES 11 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000161019 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT01030000234950 ENSGT00950000183176.b.f ENSGT00940000161019 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Channel bull blenny MODERN SPECIES 2 lratd2a (ENSCGOG00000023615) TRIB1 (ENSCGOG00000023614) cibar1 (ENSCGOG00000023610) ENSCGOG00000023604 runx1t1 (ENSCGOG00000023558) ENSCGOG00000023553 otud6b (ENSCGOG00000023552) RAB5A (ENSCGOG00000023540) kat2b (ENSCGOG00000023382) ENSCGOG00000023369 ZNF385D (ENSCGOG00000023368) rab25a (ENSCGOG00000023367) UBQLN4 (ENSCGOG00000023348) LIM2 (ENSCGOG00000023346) TINAGL1 (ENSCGOG00000023343) cfap300 (ENSCGOG00000023333) #22 KCNQ4 (ENSCGOG00000023303) nfyc (ENSCGOG00000023296) ENSCGOG00000023288 RPRD1A (ENSCGOG00000023284) fkbp9 (ENSCGOG00000023235) crtap (ENSCGOG00000023232) fbxl2 (ENSCGOG00000023220) clasp2 (ENSCGOG00000018571) ubp1 (ENSCGOG00000018343) pdcd6ip (ENSCGOG00000017809) ENSCGOG00000017791 cyhr1 (ENSCGOG00000017786) ENSCGOG00000017573 fabp3 (ENSCGOG00000017548) zcchc17 (ENSCGOG00000017543) Pike perch MODERN SPECIES 41 cibar1 (ENSSLUG00000010406) ENSSLUG00000010405 ENSSLUG00000010402 runx1t1 (ENSSLUG00000010101) ENSSLUG00000010079 otud6b (ENSSLUG00000010073) RAB5A (ENSSLUG00000010063) kat2b (ENSSLUG00000009183) ENSSLUG00000009098 ZNF385D (ENSSLUG00000009085) rab25a (ENSSLUG00000009075) UBQLN4 (ENSSLUG00000009055) lim2.4 (ENSSLUG00000009042) TINAGL1 (ENSSLUG00000007965) cfap300 (ENSSLUG00000007927) #22 KCNQ4 (ENSSLUG00000007900) nfyc (ENSSLUG00000007788) ENSSLUG00000007770 RPRD1A (ENSSLUG00000007758) fkbp9 (ENSSLUG00000007663) crtap (ENSSLUG00000007641) ENSSLUG00000007630 fbxl2 (ENSSLUG00000007401) clasp2 (ENSSLUG00000002212) ubp1 (ENSSLUG00000001764) pdcd6ip (ENSSLUG00000001521) ENSSLUG00000024666 cyhr1 (ENSSLUG00000024661) ENSSLUG00000024658 fabp3 (ENSSLUG00000024657) Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000161019 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Stickleback MODERN SPECIES 9 klhl38a (ENSGACG00000005128) fam91a1 (ENSGACG00000005113) TRIB1 (ENSGACG00000005101) cibar1 (ENSGACG00000005082) runx1t1 (ENSGACG00000005059) ENSGACG00000005052 otud6b (ENSGACG00000005002) RAB5A (ENSGACG00000004997) kat2b (ENSGACG00000004986) ENSGACG00000004980 ZNF385D (ENSGACG00000004976) rab25a (ENSGACG00000004965) UBQLN4 (ENSGACG00000004959) LIM2 (ENSGACG00000004952) TINAGL1 (ENSGACG00000004892) cfap300 (ENSGACG00000004879) #22 KCNQ4 (ENSGACG00000004872) nfyc (ENSGACG00000004846) ENSGACG00000004837 RPRD1A (ENSGACG00000004817) fkbp9 (ENSGACG00000004796) crtap (ENSGACG00000004769) ENSGACG00000004765 ENSGACG00000004762 ENSGACG00000004761 si:dkeyp-120h9.1 (ENSGACG00000004716) ripor2 (ENSGACG00000004704) gmnn (ENSGACG00000004689) zgc:111986 (ENSGACG00000004672) acot13 (ENSGACG00000004660) tdp2b (ENSGACG00000004644) Lumpfish MODERN SPECIES 2 TRIB1 (ENSCLMG00005001804) cibar1 (ENSCLMG00005001806) triqk (ENSCLMG00005001808) runx1t1 (ENSCLMG00005001825) ENSCLMG00005002564 otud6b (ENSCLMG00005002565) RAB5A (ENSCLMG00005002566) kat2b (ENSCLMG00005002571) ENSCLMG00005002593 ZNF385D (ENSCLMG00005002596) rab25a (ENSCLMG00005002601) UBQLN4 (ENSCLMG00005002604) LIM2 (ENSCLMG00005002607) ENSCLMG00005002608 TINAGL1 (ENSCLMG00005002619) cfap300 (ENSCLMG00005003216) #22 imp4 (ENSCLMG00005003227) KCNQ4 (ENSCLMG00005003246) nfyc (ENSCLMG00005003265) ENSCLMG00005003294 RPRD1A (ENSCLMG00005003296) fkbp9 (ENSCLMG00005003305) crtap (ENSCLMG00005003578) ENSCLMG00005003579 fbxl2 (ENSCLMG00005003596) clasp2 (ENSCLMG00005004231) ubp1 (ENSCLMG00005017688) pdcd6ip (ENSCLMG00005019295) ENSCLMG00005019302 cyhr1 (ENSCLMG00005019303) ENSCLMG00005019310 Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Cichlidae ANCESTRAL SPECIES 7 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Haplochromini ANCESTRAL SPECIES 5 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Burton s mouthbrooder MODERN SPECIES 288 fam91a1 (ENSHBUG00000003560) lratd2a (ENSHBUG00000003578) TRIB1 (ENSHBUG00000003590) cibar1 (ENSHBUG00000003662) triqk (ENSHBUG00000003679) runx1t1 (ENSHBUG00000003721) otud6b (ENSHBUG00000003747) RAB5A (ENSHBUG00000003752) kat2b (ENSHBUG00000003802) ENSHBUG00000003842 ZNF385D (ENSHBUG00000003857) rab25a (ENSHBUG00000003876) UBQLN4 (ENSHBUG00000003919) lim2.4 (ENSHBUG00000003933) TINAGL1 (ENSHBUG00000003993) cfap300 (ENSHBUG00000004068) #22 KCNQ4 (ENSHBUG00000004142) nfyc (ENSHBUG00000004235) ENSHBUG00000004268 RPRD1A (ENSHBUG00000004298) Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.A ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 Eastern happy MODERN SPECIES 13 lratd2a (ENSACLG00000017847) TRIB1 (ENSACLG00000017865) cibar1 (ENSACLG00000017875) triqk (ENSACLG00000017940) runx1t1 (ENSACLG00000017970) ENSACLG00000018022 otud6b (ENSACLG00000018028) RAB5A (ENSACLG00000018066) kat2b (ENSACLG00000018091) ENSACLG00000018207 ZNF385D (ENSACLG00000018233) rab25a (ENSACLG00000018262) UBQLN4 (ENSACLG00000018287) lim2.4 (ENSACLG00000018324) TINAGL1 (ENSACLG00000018345) cfap300 (ENSACLG00000018413) #22 KCNQ4 (ENSACLG00000018427) nfyc (ENSACLG00000018486) ENSACLG00000018542 RPRD1A (ENSACLG00000018571) ENSACLG00000018626 fkbp9 (ENSACLG00000018661) crtap (ENSACLG00000018729) ENSACLG00000018751 fbxl2 (ENSACLG00000018784) ENSACLG00000018853 clasp2 (ENSACLG00000018864) ubp1 (ENSACLG00000018955) pdcd6ip (ENSACLG00000019017) cyhr1 (ENSACLG00000019052) ENSACLG00000019088 Zebra mbuna MODERN SPECIES 1104 fam91a1 (ENSMZEG00005005037) lratd2a (ENSMZEG00005005078) TRIB1 (ENSMZEG00005005082) cibar1 (ENSMZEG00005005095) triqk (ENSMZEG00005005113) runx1t1 (ENSMZEG00005005142) otud6b (ENSMZEG00005005182) RAB5A (ENSMZEG00005005205) kat2b (ENSMZEG00005005213) ENSMZEG00005005278 ZNF385D (ENSMZEG00005005294) rab25a (ENSMZEG00005005311) UBQLN4 (ENSMZEG00005005334) lim2.4 (ENSMZEG00005005355) TINAGL1 (ENSMZEG00005005377) cfap300 (ENSMZEG00005005410) #22 KCNQ4 (ENSMZEG00005005425) nfyc (ENSMZEG00005005451) ENSMZEG00005005503 RPRD1A (ENSMZEG00005005518) ENSMZEG00005005529 fkbp9 (ENSMZEG00005005536) crtap (ENSMZEG00005005549) ENSMZEG00005005568 fbxl2 (ENSMZEG00005005587) ENSMZEG00005005615 clasp2 (ENSMZEG00005005622) ubp1 (ENSMZEG00005005665) pdcd6ip (ENSMZEG00005005702) cyhr1 (ENSMZEG00005005727) ENSMZEG00005005750 P. nyererei MODERN SPECIES 323 klhl38a (ENSPNYG00000010808) fam91a1 (ENSPNYG00000010766) lratd2a (ENSPNYG00000010751) TRIB1 (ENSPNYG00000010744) cibar1 (ENSPNYG00000010722) triqk (ENSPNYG00000010706) runx1t1 (ENSPNYG00000010652) otud6b (ENSPNYG00000010630) ENSPNYG00000010612 kat2b (ENSPNYG00000010541) ENSPNYG00000010506 rab25a (ENSPNYG00000010491) UBQLN4 (ENSPNYG00000010469) lim2.4 (ENSPNYG00000010457) TINAGL1 (ENSPNYG00000010424) cfap300 (ENSPNYG00000010375) #22 KCNQ4 (ENSPNYG00000010332) nfyc (ENSPNYG00000010254) RPRD1A (ENSPNYG00000010221) fkbp9 (ENSPNYG00000010146) crtap (ENSPNYG00000010124) ENSPNYG00000010102 fbxl2 (ENSPNYG00000010086) ENSPNYG00000010075 clasp2 (ENSPNYG00000009999) ubp1 (ENSPNYG00000009934) pdcd6ip (ENSPNYG00000009865) cyhr1 (ENSPNYG00000009822) ENSPNYG00000009796 fabp3 (ENSPNYG00000009774) zcchc17 (ENSPNYG00000009648) Lyretail cichlid MODERN SPECIES 302 lratd2a (ENSNBRG00000011869) TRIB1 (ENSNBRG00000011861) cibar1 (ENSNBRG00000011840) triqk (ENSNBRG00000011829) runx1t1 (ENSNBRG00000011794) otud6b (ENSNBRG00000011773) RAB5A (ENSNBRG00000011763) kat2b (ENSNBRG00000011694) ENSNBRG00000011645 ZNF385D (ENSNBRG00000011627) rab25a (ENSNBRG00000011607) UBQLN4 (ENSNBRG00000011567) lim2.4 (ENSNBRG00000011542) TINAGL1 (ENSNBRG00000011501) ENSNBRG00000011490 cfap300 (ENSNBRG00000011441) #22 KCNQ4 (ENSNBRG00000011392) nfyc (ENSNBRG00000011317) ENSNBRG00000011302 RPRD1A (ENSNBRG00000011271) fkbp9 (ENSNBRG00000011237) crtap (ENSNBRG00000011216) ENSNBRG00000011187 fbxl2 (ENSNBRG00000011161) ENSNBRG00000011151 clasp2 (ENSNBRG00000011064) ubp1 (ENSNBRG00000010962) pdcd6ip (ENSNBRG00000010918) cyhr1 (ENSNBRG00000010900) ENSNBRG00000010843 fabp3 (ENSNBRG00000010816) Nile tilapia MODERN SPECIES 13 fam91a1 (ENSONIG00000002456) ENSONIG00000033671 lratd2a (ENSONIG00000020847) TRIB1 (ENSONIG00000033303) cibar1 (ENSONIG00000002446) triqk (ENSONIG00000038292) runx1t1 (ENSONIG00000002435) otud6b (ENSONIG00000002430) kat2b (ENSONIG00000002420) ENSONIG00000002417 ENSONIG00000002414 rab25a (ENSONIG00000027893) UBQLN4 (ENSONIG00000002403) LIM2 (ENSONIG00000016373) TINAGL1 (ENSONIG00000002394) cfap300 (ENSONIG00000002387) #22 KCNQ4 (ENSONIG00000002385) nfyc (ENSONIG00000002373) ENSONIG00000040100 RPRD1A (ENSONIG00000002368) fkbp9 (ENSONIG00000002364) crtap (ENSONIG00000002363) ENSONIG00000002361 fbxl2 (ENSONIG00000002355) clasp2 (ENSONIG00000002323) ubp1 (ENSONIG00000002320) pdcd6ip (ENSONIG00000002317) ENSONIG00000002315 cyhr1 (ENSONIG00000002313) ENSONIG00000029139 fabp3 (ENSONIG00000040251) Midas cichlid MODERN SPECIES 1257 triqk (ENSACIG00000019162) runx1t1 (ENSACIG00000019175) otud6b (ENSACIG00000019192) RAB5A (ENSACIG00000019251) kat2b (ENSACIG00000019715) ENSACIG00000019765 ZNF385D (ENSACIG00000019786) rab25a (ENSACIG00000019803) UBQLN4 (ENSACIG00000019826) LIM2 (ENSACIG00000019855) TINAGL1 (ENSACIG00000019865) cfap300 (ENSACIG00000019886) #22 KCNQ4 (ENSACIG00000019926) nfyc (ENSACIG00000019950) RPRD1A (ENSACIG00000019980) fkbp9 (ENSACIG00000019991) crtap (ENSACIG00000020022) ENSACIG00000020151 fbxl2 (ENSACIG00000020167) ENSACIG00000020193 clasp2 (ENSACIG00000020207) ubp1 (ENSACIG00000020276) pdcd6ip (ENSACIG00000020302) cyhr1 (ENSACIG00000020337) ENSACIG00000020355 fabp3 (ENSACIG00000020437) zcchc17 (ENSACIG00000020915) Pomacentridae ANCESTRAL SPECIES 7 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00980000199767 ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Amphiprion ANCESTRAL SPECIES 16 ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00980000199767 ENSGT00940000164463 ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Clown anemonefish MODERN SPECIES 1714 ENSAOCG00000003446 otud6b (ENSAOCG00000003456) RAB5A (ENSAOCG00000000090) kat2b (ENSAOCG00000003484) ENSAOCG00000003496 ZNF385D (ENSAOCG00000003515) rab25a (ENSAOCG00000003528) UBQLN4 (ENSAOCG00000000096) LIM2 (ENSAOCG00000003553) TINAGL1 (ENSAOCG00000003561) cfap300 (ENSAOCG00000003573) #22 KCNQ4 (ENSAOCG00000003594) nfyc (ENSAOCG00000003630) ENSAOCG00000003645 RPRD1A (ENSAOCG00000003657) fkbp9 (ENSAOCG00000003677) crtap (ENSAOCG00000003683) ENSAOCG00000003703 fbxl2 (ENSAOCG00000003718) ENSAOCG00000002694 clasp2 (ENSAOCG00000003757) ubp1 (ENSAOCG00000003792) pdcd6ip (ENSAOCG00000003825) ENSAOCG00000003840 cyhr1 (ENSAOCG00000003852) ENSAOCG00000003865 Orange clownfish MODERN SPECIES 8 lratd2a (ENSAPEG00000013116) TRIB1 (ENSAPEG00000013133) cibar1 (ENSAPEG00000013141) triqk (ENSAPEG00000013161) runx1t1 (ENSAPEG00000013263) ENSAPEG00000013297 otud6b (ENSAPEG00000013341) RAB5A (ENSAPEG00000013376) kat2b (ENSAPEG00000013389) ENSAPEG00000013460 ZNF385D (ENSAPEG00000013490) rab25a (ENSAPEG00000013500) UBQLN4 (ENSAPEG00000013530) LIM2 (ENSAPEG00000013579) TINAGL1 (ENSAPEG00000013606) cfap300 (ENSAPEG00000013640) #22 KCNQ4 (ENSAPEG00000013703) nfyc (ENSAPEG00000013755) ENSAPEG00000013806 RPRD1A (ENSAPEG00000013832) fkbp9 (ENSAPEG00000013853) crtap (ENSAPEG00000013897) ENSAPEG00000013933 fbxl2 (ENSAPEG00000013957) ENSAPEG00000013984 clasp2 (ENSAPEG00000014025) ubp1 (ENSAPEG00000014146) pdcd6ip (ENSAPEG00000014219) ENSAPEG00000014325 cyhr1 (ENSAPEG00000014374) ENSAPEG00000014406 Spiny chromis MODERN SPECIES 955 ENSAPOG00000021453 otud6b (ENSAPOG00000021426) RAB5A (ENSAPOG00000021391) kat2b (ENSAPOG00000021362) ENSAPOG00000021305 ZNF385D (ENSAPOG00000021285) rab25a (ENSAPOG00000021268) UBQLN4 (ENSAPOG00000021229) LIM2 (ENSAPOG00000021185) TINAGL1 (ENSAPOG00000021153) cfap300 (ENSAPOG00000021099) #22 KCNQ4 (ENSAPOG00000021087) nfyc (ENSAPOG00000020994) Bicolor damselfish MODERN SPECIES 282 lratd2a (ENSSPAG00000015483) TRIB1 (ENSSPAG00000015496) cibar1 (ENSSPAG00000015509) triqk (ENSSPAG00000015599) runx1t1 (ENSSPAG00000015609) ENSSPAG00000015641 otud6b (ENSSPAG00000015659) RAB5A (ENSSPAG00000015678) kat2b (ENSSPAG00000015695) ENSSPAG00000015783 ZNF385D (ENSSPAG00000015801) rab25a (ENSSPAG00000015817) UBQLN4 (ENSSPAG00000015830) LIM2 (ENSSPAG00000015867) TINAGL1 (ENSSPAG00000015885) cfap300 (ENSSPAG00000015942) #22 Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 Oryzias ANCESTRAL SPECIES 22 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 Oryzias_b ANCESTRAL SPECIES 22 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Indian medaka MODERN SPECIES 3 fam91a1 (ENSOMEG00000011027) lratd2a (ENSOMEG00000010918) TRIB1 (ENSOMEG00000010903) cibar1 (ENSOMEG00000010893) triqk (ENSOMEG00000010883) runx1t1 (ENSOMEG00000010840) otud6b (ENSOMEG00000010735) RAB5A (ENSOMEG00000010692) kat2b (ENSOMEG00000010646) ENSOMEG00000010604 ZNF385D (ENSOMEG00000010535) rab25a (ENSOMEG00000010510) UBQLN4 (ENSOMEG00000010492) lim2.4 (ENSOMEG00000010467) TINAGL1 (ENSOMEG00000010435) cfap300 (ENSOMEG00000010381) #22 KCNQ4 (ENSOMEG00000010348) nfyc (ENSOMEG00000010270) ENSOMEG00000010192 RPRD1A (ENSOMEG00000010157) ENSOMEG00000010121 fkbp9 (ENSOMEG00000010099) crtap (ENSOMEG00000010081) ENSOMEG00000010051 fbxl2 (ENSOMEG00000000241) clasp2 (ENSOMEG00000009947) ubp1 (ENSOMEG00000009863) pdcd6ip (ENSOMEG00000009710) ENSOMEG00000009631 cyhr1 (ENSOMEG00000009594) ENSOMEG00000009551 Javanese ricefish MODERN SPECIES 2 lratd2a (ENSOJAG00000011622) TRIB1 (ENSOJAG00000011629) cibar1 (ENSOJAG00000011640) triqk (ENSOJAG00000011659) ENSOJAG00000011664 runx1t1 (ENSOJAG00000011709) otud6b (ENSOJAG00000011997) ENSOJAG00000012005 kat2b (ENSOJAG00000012098) ENSOJAG00000012666 ENSOJAG00000012684 rab25a (ENSOJAG00000012701) UBQLN4 (ENSOJAG00000012728) LIM2 (ENSOJAG00000012774) TINAGL1 (ENSOJAG00000012826) cfap300 (ENSOJAG00000012913) #22 KCNQ4 (ENSOJAG00000012989) nfyc (ENSOJAG00000013876) ENSOJAG00000014033 RPRD1A (ENSOJAG00000014045) dnal1 (ENSOJAG00000014068) fkbp9 (ENSOJAG00000014101) crtap (ENSOJAG00000014314) ENSOJAG00000014328 fbxl2 (ENSOJAG00000014384) clasp2 (ENSOJAG00000014769) ubp1 (ENSOJAG00000016569) pdcd6ip (ENSOJAG00000016848) ENSOJAG00000016911 cyhr1 (ENSOJAG00000016981) ENSOJAG00000017012 Oryzias_a ANCESTRAL SPECIES 18 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT01030000234950 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00990000210357 ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 Chinese medaka MODERN SPECIES 13 lratd2a (ENSOSIG00000005835) TRIB1 (ENSOSIG00000005839) cibar1 (ENSOSIG00000005841) ENSOSIG00000005842 ENSOSIG00000005843 runx1t1 (ENSOSIG00000005853) ENSOSIG00000005978 ENSOSIG00000005981 kat2b (ENSOSIG00000005983) ENSOSIG00000006010 ENSOSIG00000006012 rab25a (ENSOSIG00000006014) UBQLN4 (ENSOSIG00000006015) LIM2 (ENSOSIG00000006016) TINAGL1 (ENSOSIG00000006018) cfap300 (ENSOSIG00000006056) #22 KCNQ4 (ENSOSIG00000006071) nfyc (ENSOSIG00000006441) ENSOSIG00000006483 RPRD1A (ENSOSIG00000006488) dnal1 (ENSOSIG00000006492) fkbp9 (ENSOSIG00000006497) crtap (ENSOSIG00000006684) ENSOSIG00000006685 ENSOSIG00000006686 fbxl2 (ENSOSIG00000006691) clasp2 (ENSOSIG00000006729) zcchc17 (ENSOSIG00000008189) ubp1 (ENSOSIG00000008221) pdcd6ip (ENSOSIG00000011247) ENSOSIG00000011259 Japanese Medaka HdrR MODERN SPECIES 2 lratd2a (ENSORLG00000012339) ENSORLG00000012333 cibar1 (ENSORLG00000012324) ENSORLG00000026495 triqk (ENSORLG00000030092) runx1t1 (ENSORLG00000012311) otud6b (ENSORLG00000012290) RAB5A (ENSORLG00000012261) kat2b (ENSORLG00000012238) sgo1 (ENSORLG00000012177) ZNF385D (ENSORLG00000012168) rab25a (ENSORLG00000012158) UBQLN4 (ENSORLG00000022806) ENSORLG00000012119 TINAGL1 (ENSORLG00000012101) cfap300 (ENSORLG00000012056) #22 KCNQ4 (ENSORLG00000012041) nfyc (ENSORLG00000012000) ENSORLG00000011943 RPRD1A (ENSORLG00000011917) dnal1 (ENSORLG00000011890) fkbp9 (ENSORLG00000011880) crtap (ENSORLG00000011852) ENSORLG00000027239 fbxl2 (ENSORLG00000011797) clasp2 (ENSORLG00000011760) ubp1 (ENSORLG00000011706) pdcd6ip (ENSORLG00000011651) ENSORLG00000011606 cyhr1 (ENSORLG00000011594) ENSORLG00000011581 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00390000009543 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164558.k ENSGT01030000234601.n.a.a.b.b ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l Poeciliinae ANCESTRAL SPECIES 18 ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164558.k ENSGT01030000234601.n.a.a.b.b ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000177252 ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l Poecilia ANCESTRAL SPECIES 24 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT01030000234601.n.a.a.b.b ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 NAME_6 ANCESTRAL SPECIES 21 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT01030000234601.n.a.a.b.b ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 Amazon molly MODERN SPECIES 273 TRIB1 (ENSPFOG00000011808) cibar1 (ENSPFOG00000011718) triqk (ENSPFOG00000011703) runx1t1 (ENSPFOG00000011423) ENSPFOG00000011364 ENSPFOG00000011360 otud6b (ENSPFOG00000011303) RAB5A (ENSPFOG00000011263) kat2b (ENSPFOG00000010842) ENSPFOG00000010790 ZNF385D (ENSPFOG00000010672) rab25a (ENSPFOG00000010632) UBQLN4 (ENSPFOG00000010520) LIM2 (ENSPFOG00000010498) TINAGL1 (ENSPFOG00000024014) cfap300 (ENSPFOG00000010433) #22 KCNQ4 (ENSPFOG00000009977) nfyc (ENSPFOG00000009785) ENSPFOG00000009758 RPRD1A (ENSPFOG00000009698) ENSPFOG00000022972 dnal1 (ENSPFOG00000009636) fkbp9 (ENSPFOG00000009499) crtap (ENSPFOG00000009354) ENSPFOG00000009319 fbxl2 (ENSPFOG00000009205) clasp2 (ENSPFOG00000008615) ubp1 (ENSPFOG00000008378) pdcd6ip (ENSPFOG00000008147) ENSPFOG00000008096 cyhr1 (ENSPFOG00000008037) Sailfin molly MODERN SPECIES 658 rab25a (ENSPLAG00000003558) UBQLN4 (ENSPLAG00000000058) LIM2 (ENSPLAG00000003623) TINAGL1 (ENSPLAG00000003671) cfap300 (ENSPLAG00000003735) #22 ENSPLAG00000003767 KCNQ4 (ENSPLAG00000003796) nfyc (ENSPLAG00000003840) ENSPLAG00000003850 RPRD1A (ENSPLAG00000003864) Guppy MODERN SPECIES 441 TRIB1 (ENSPREG00000006742) cibar1 (ENSPREG00000006693) ENSPREG00000006676 runx1t1 (ENSPREG00000006632) ENSPREG00000006614 ENSPREG00000006593 otud6b (ENSPREG00000006541) ENSPREG00000006527 kat2b (ENSPREG00000006463) ENSPREG00000006434 ENSPREG00000006413 rab25a (ENSPREG00000006119) UBQLN4 (ENSPREG00000006021) LIM2 (ENSPREG00000006002) TINAGL1 (ENSPREG00000005972) cfap300 (ENSPREG00000005910) #22 KCNQ4 (ENSPREG00000005859) nfyc (ENSPREG00000005805) ENSPREG00000005783 RPRD1A (ENSPREG00000005762) dnal1 (ENSPREG00000005740) fkbp9 (ENSPREG00000005728) crtap (ENSPREG00000005707) ENSPREG00000005667 fbxl2 (ENSPREG00000005611) clasp2 (ENSPREG00000005520) ubp1 (ENSPREG00000005474) pdcd6ip (ENSPREG00000005420) cyhr1 (ENSPREG00000005377) ENSPREG00000005350 fabp3 (ENSPREG00000005333) Platyfish MODERN SPECIES 4 TRIB1 (ENSXMAG00000003315) ENSXMAG00000023013 cibar1 (ENSXMAG00000003312) triqk (ENSXMAG00000027609) runx1t1 (ENSXMAG00000029124) ENSXMAG00000003286 otud6b (ENSXMAG00000003276) RAB5A (ENSXMAG00000028889) kat2b (ENSXMAG00000003253) ENSXMAG00000003247 ZNF385D (ENSXMAG00000026238) rab25a (ENSXMAG00000003233) UBQLN4 (ENSXMAG00000003208) LIM2 (ENSXMAG00000003204) TINAGL1 (ENSXMAG00000003194) cfap300 (ENSXMAG00000007924) #22 KCNQ4 (ENSXMAG00000003184) nfyc (ENSXMAG00000003179) ENSXMAG00000003178 RPRD1A (ENSXMAG00000003172) dnal1 (ENSXMAG00000028736) fkbp9 (ENSXMAG00000003160) crtap (ENSXMAG00000003153) ENSXMAG00000029488 ENSXMAG00000026756 fbxl2 (ENSXMAG00000003112) ENSXMAG00000022442 clasp2 (ENSXMAG00000003043) ubp1 (ENSXMAG00000003023) pdcd6ip (ENSXMAG00000003000) ENSXMAG00000002994 NAME_4 ANCESTRAL SPECIES 10 ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00940000164558.k ENSGT01030000234601.n.a.a.b.b.f ENSGT00390000012840 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b.f ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Mummichog MODERN SPECIES 2253 cibar1 (ENSFHEG00000013881) triqk (ENSFHEG00000013899) ENSFHEG00000013908 runx1t1 (ENSFHEG00000013941) ENSFHEG00000013950 ENSFHEG00000013970 otud6b (ENSFHEG00000014034) ENSFHEG00000014070 kat2b (ENSFHEG00000014137) ENSFHEG00000014149 ENSFHEG00000014162 rab25a (ENSFHEG00000014186) UBQLN4 (ENSFHEG00000014233) LIM2 (ENSFHEG00000014247) TINAGL1 (ENSFHEG00000014281) cfap300 (ENSFHEG00000014297) #22 KCNQ4 (ENSFHEG00000000825) nfyc (ENSFHEG00000014493) RPRD1A (ENSFHEG00000014516) ENSFHEG00000014531 dnal1 (ENSFHEG00000014589) fkbp9 (ENSFHEG00000014633) crtap (ENSFHEG00000014662) ENSFHEG00000014681 ENSFHEG00000014691 Sheepshead minnow MODERN SPECIES 183 ENSCVAG00000008267 otud6b (ENSCVAG00000008258) RAB5A (ENSCVAG00000008239) kat2b (ENSCVAG00000008211) ENSCVAG00000008142 ZNF385D (ENSCVAG00000008136) rab25a (ENSCVAG00000008126) UBQLN4 (ENSCVAG00000008099) lim2.4 (ENSCVAG00000000221) TINAGL1 (ENSCVAG00000008044) cfap300 (ENSCVAG00000008000) #22 KCNQ4 (ENSCVAG00000007920) nfyc (ENSCVAG00000007788) ENSCVAG00000007740 RPRD1A (ENSCVAG00000007732) dnal1 (ENSCVAG00000007704) fkbp9 (ENSCVAG00000007686) crtap (ENSCVAG00000007675) ENSCVAG00000007654 fbxl2 (ENSCVAG00000007633) clasp2 (ENSCVAG00000007610) ubp1 (ENSCVAG00000000202) pdcd6ip (ENSCVAG00000007264) ENSCVAG00000007202 cyhr1 (ENSCVAG00000007158) ENSCVAG00000007135 Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000159198.g ENSGT00950000182986.a.b.b ENSGT00390000010285.c ENSGT00390000017350 ENSGT00950000183176.b.f ENSGT00390000012840 ENSGT00940000166759 ENSGT00940000154337.a.b ENSGT00940000154995 ENSGT00940000154107.b ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 #22 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a ENSGT00390000009163 ENSGT00940000153845.a.b ENSGT00940000155574.C ENSGT00940000156148 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 Turquoise killifish MODERN SPECIES 1628 CAP2 (ENSNFUG00015017505) RBM24A (ENSNFUG00015018351) TRIQK (ENSNFUG00015018355) runx1t1 (ENSNFUG00015018373) OTUD6B (ENSNFUG00015018725) RAB5AA (ENSNFUG00015018732) kat2b (ENSNFUG00015018758) ENSNFUG00015019192 ZNF385D (ENSNFUG00015019197) rab25a (ENSNFUG00015019204) UBQLN4 (ENSNFUG00015019223) LIM2 (ENSNFUG00015019294) TINAGL1 (ENSNFUG00015019296) ncaph (ENSNFUG00015019332) vamp8 (ENSNFUG00015019343) cfap300 (ENSNFUG00015019344) #22 KCNQ4 (ENSNFUG00015019359) NFYC (ENSNFUG00015020051) ENSNFUG00015020066 RPRD1A (ENSNFUG00015020073) ENSNFUG00015020094 DNAL1 (ENSNFUG00015020100) fkbp9 (ENSNFUG00015020111) crtap (ENSNFUG00015020158) ENSNFUG00015020165 fbxl2 (ENSNFUG00015020172) clasp2 (ENSNFUG00015020334) ubp1 (ENSNFUG00015021591) PDCD6IP (ENSNFUG00015021638) ARPP21 (ENSNFUG00015021713) CYHR1 (ENSNFUG00015021722) Mangrove rivulus MODERN SPECIES 2 cibar1 (ENSKMAG00000005279) triqk (ENSKMAG00000005257) runx1t1 (ENSKMAG00000005217) ENSKMAG00000005189 ENSKMAG00000005172 ENSKMAG00000005159 ENSKMAG00000005130 RAB5A (ENSKMAG00000005111) kat2b (ENSKMAG00000005023) ENSKMAG00000004974 ZNF385D (ENSKMAG00000004957) rab25a (ENSKMAG00000004945) UBQLN4 (ENSKMAG00000004904) LIM2 (ENSKMAG00000004882) TINAGL1 (ENSKMAG00000004823) cfap300 (ENSKMAG00000004758) #22 KCNQ4 (ENSKMAG00000004704) nfyc (ENSKMAG00000004636) RPRD1A (ENSKMAG00000004597) dnal1 (ENSKMAG00000004577) fkbp9 (ENSKMAG00000004544) crtap (ENSKMAG00000004531) ENSKMAG00000004514 fbxl2 (ENSKMAG00000004442) clasp2 (ENSKMAG00000004284) ubp1 (ENSKMAG00000004223) pdcd6ip (ENSKMAG00000004128) ENSKMAG00000004052 cyhr1 (ENSKMAG00000004026) ENSKMAG00000003756 fabp3 (ENSKMAG00000003677) Tiger tail seahorse MODERN SPECIES 331 PTPRM (ENSHCOG00000013766) ENSHCOG00000013790 ENSHCOG00000013807 ENSHCOG00000013816 ENSHCOG00000013819 crygn1 (ENSHCOG00000013827) pter (ENSHCOG00000013846) gpt (ENSHCOG00000013865) ENSHCOG00000013876 gng5 (ENSHCOG00000013881) ssx2ipa (ENSHCOG00000013927) XCR1 (ENSHCOG00000013942) ENSHCOG00000014048 adcyap1r1a (ENSHCOG00000014083) ghrhra (ENSHCOG00000014179) cfap300 (ENSHCOG00000014185) #22 eef1da (ENSHCOG00000014191) ENSHCOG00000014199 ftr67 (ENSHCOG00000014206) si:ch73-52e5.2 (ENSHCOG00000014208) them6 (ENSHCOG00000014211) ENSHCOG00000014229 zgc:113531 (ENSHCOG00000014253) b4galt2 (ENSHCOG00000000684) atp6v0b (ENSHCOG00000000401) ENSHCOG00000016658 ift22 (ENSHCOG00000016757) ENSHCOG00000016783 ENSHCOG00000016788 ENSHCOG00000016799 gng12a (ENSHCOG00000016808) Pinecone sodierfish MODERN SPECIES 2 fam91a1 (ENSMMDG00005003443) lratd2a (ENSMMDG00005003458) TRIB1 (ENSMMDG00005003459) cibar1 (ENSMMDG00005003462) triqk (ENSMMDG00005003468) runx1t1 (ENSMMDG00005003488) otud6b (ENSMMDG00005004276) RAB5A (ENSMMDG00005004293) kat2b (ENSMMDG00005004318) ENSMMDG00005004330 ZNF385D (ENSMMDG00005004342) rab25a (ENSMMDG00005004352) UBQLN4 (ENSMMDG00005004392) LIM2 (ENSMMDG00005004800) TINAGL1 (ENSMMDG00005004814) cfap300 (ENSMMDG00005004822) #22 KCNQ4 (ENSMMDG00005004827) nfyc (ENSMMDG00005004862) ENSMMDG00005005350 RPRD1A (ENSMMDG00005005356) fkbp9 (ENSMMDG00005005387) crtap (ENSMMDG00005005477) ENSMMDG00005005478 fbxl2 (ENSMMDG00005005496) clasp2 (ENSMMDG00005006593) ubp1 (ENSMMDG00005023022) pdcd6ip (ENSMMDG00005023041) ENSMMDG00005023046 cyhr1 (ENSMMDG00005023048) ENSMMDG00005023051 fabp3 (ENSMMDG00005023052) Cod MODERN SPECIES 14 ENSGMOG00000010049 SLC66A2 (ENSGMOG00000002117) ENSGMOG00000031463 ENSGMOG00000016888 nt5c1aa (ENSGMOG00000019235) hpca (ENSGMOG00000004685) tmem54b (ENSGMOG00000004679) ENSGMOG00000004675 ENSGMOG00000030318 ENSGMOG00000028124 ENSGMOG00000024988 ENSGMOG00000022868 zgc:91944 (ENSGMOG00000004622) ENSGMOG00000034830 ENSGMOG00000031352 ENSGMOG00000017358 #22 ENSGMOG00000000124 ENSGMOG00000000118 ENSGMOG00000027623 ENSGMOG00000000099 ENSGMOG00000027900 fkbp9 (ENSGMOG00000014984) crtap (ENSGMOG00000014964) ENSGMOG00000028998 fbxl2 (ENSGMOG00000010295) clasp2 (ENSGMOG00000010321) ubp1 (ENSGMOG00000010354) pdcd6ip (ENSGMOG00000010373) cyhr1 (ENSGMOG00000010429) ENSGMOG00000010440 fabp3 (ENSGMOG00000010446) Protacanthopterygii ANCESTRAL SPECIES 174 ENSGT00940000155492.a.a ##17 ENSGT01060000248588.a.d.b ##19 ENSGT00940000161966 #20 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175 #24 ENSGT00940000158694 ENSGT00940000166008 ENSGT00950000182901 ENSGT00940000160082.a.b ENSGT00950000182987.c.a.b.a ENSGT00390000017203 ENSGT00940000164330 ENSGT00390000001618.r.a ENSGT00940000155585.b ENSGT01100000263696 ENSGT00390000016675 ENSGT00550000074863 Salmoninae ANCESTRAL SPECIES 890 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175.e.a #24 ENSGT00910000144784.b ENSGT00940000163234.a.b.e ENSGT00940000163922.a ENSGT00510000048311 Huchen MODERN SPECIES 758 ENSHHUG00000013471 ENSHHUG00000013474 ENSHHUG00000013517 atp2b4 (ENSHHUG00000013543) ENSHHUG00000014426 ##19 ENSHHUG00000014437 #22 ENSHHUG00000014441 #23 Salmoninae_a ANCESTRAL SPECIES 138 ENSGT00940000156933.d.b ENSGT00390000012429 ENSGT00950000182767.b.a.b.b.b ENSGT00950000183090.D ENSGT00990000210835 ENSGT00940000154943.eb.b ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175.e.a #24 ENSGT00940000155585.b.h ENSGT00940000164330.j.b ENSGT00390000000378.d.a.o.b.f ENSGT00390000016675 ENSGT00910000144784.b ENSGT00940000163234.a.b.e ENSGT00940000163922.a ENSGT00510000048311 ENSGT00940000157301.b.e ENSGT01050000244891.B ENSGT00450000040326 ENSGT00940000164070.b ENSGT00940000155349.d Salmo ANCESTRAL SPECIES 17 ENSGT00940000156933.d.b ENSGT00390000012429 ENSGT00950000182767.b.a.b.b.b ENSGT00950000183090.D ENSGT00990000210835 ENSGT00940000154943.eb.b ENSGT01060000248588.a.d.b.c.b ##19 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175.e.a #24 ENSGT00940000155585.b.h ENSGT00390000016675 ENSGT00940000153576.c.b.x.d.a ENSGT00940000157119.b ENSGT00940000163234.a.b.e ENSGT00940000163922.a ENSGT00510000048311 ENSGT00940000157301.b.e ENSGT01050000244891.B ENSGT00450000040326 ENSGT00940000164070.b ENSGT00940000155349.d ENSGT00940000155947.b.c River trout MODERN SPECIES 10 ENSSTUG00000007547 ENSSTUG00000007550 ENSSTUG00000007563 ENSSTUG00000007579 ENSSTUG00000007694 mia (ENSSTUG00000007710) alg9 (ENSSTUG00000007733) ENSSTUG00000008215 dlat (ENSSTUG00000008231) ENSSTUG00000008382 ##19 ENSSTUG00000008430 CFAP300 (ENSSTUG00000008432) #22 ENSSTUG00000008448 #23 birc2 (ENSSTUG00000008480) #24 ENSSTUG00000008693 rpl23a (ENSSTUG00000008697) heatr6 (ENSSTUG00000008712) ENSSTUG00000008799 ENSSTUG00000008812 slc43a2b (ENSSTUG00000008821) ENSSTUG00000008843 PITPNA (ENSSTUG00000008846) ENSSTUG00000008998 slc47a1 (ENSSTUG00000009090) tmigd1 (ENSSTUG00000009140) RAB38 (ENSSTUG00000009146) kpna7 (ENSSTUG00000009172) Atlantic salmon MODERN SPECIES 23 ENSSSAG00000092945 ENSSSAG00000103608 ENSSSAG00000095821 ENSSSAG00000024824 ENSSSAG00000089398 ENSSSAG00000120965 mia (ENSSSAG00000057407) ENSSSAG00000001452 ENSSSAG00000001437 ENSSSAG00000001369 ##19 ENSSSAG00000083854 CFAP300 (ENSSSAG00000081875) #22 ENSSSAG00000093908 #23 ENSSSAG00000105633 ENSSSAG00000117852 ENSSSAG00000001392 #24 ENSSSAG00000098750 ENSSSAG00000117427 ENSSSAG00000001343 ENSSSAG00000071978 ENSSSAG00000084860 ENSSSAG00000116690 ENSSSAG00000085225 tmigd1 (ENSSSAG00000054561) ENSSSAG00000121464 kpna7 (ENSSSAG00000001263) ENSSSAG00000099081 Oncorhynchus ANCESTRAL SPECIES 141 ENSGT00940000153576.c.b.x.d.a ENSGT00940000156933.d.b ENSGT00390000012429 ENSGT00950000182767.b.a.b.b.b ENSGT00950000183090.D ENSGT00990000210835 ENSGT00940000154943.eb.b ENSGT01060000248588.a.d.b.d ##19 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175.e.a #24 ENSGT00940000155585.b.h ENSGT01100000263696 ENSGT00390000016675 Rainbow trout MODERN SPECIES 1 ENSOMYG00000054908 ENSOMYG00000054975 ENSOMYG00000006147 ENSOMYG00000036361 ENSOMYG00000006088 ENSOMYG00000057399 ENSOMYG00000004077 ENSOMYG00000005089 ENSOMYG00000004046 ENSOMYG00000065604 ENSOMYG00000035392 ENSOMYG00000003728 ENSOMYG00000002980 ##19 ENSOMYG00000003279 ENSOMYG00000062220 ENSOMYG00000003255 #22 ENSOMYG00000065532 #23 ENSOMYG00000068584 ENSOMYG00000007813 ENSOMYG00000072537 ENSOMYG00000051402 ENSOMYG00000068702 ENSOMYG00000007831 ENSOMYG00000007870 ENSOMYG00000068961 ENSOMYG00000061682 ENSOMYG00000062209 ENSOMYG00000063024 ENSOMYG00000007428 ENSOMYG00000054534 smyd4 (ENSOMYG00000075262) Oncorhynchus_a ANCESTRAL SPECIES 215 ENSGT00940000153576.c.b.x.d.a ENSGT00940000156933.d.b ENSGT00390000012429 ENSGT00950000182767.b.a.b.b.b ENSGT00950000183090.D ENSGT00990000210835 ENSGT00940000154943.eb.b ENSGT01060000248588.a.d.b.d ##19 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT00940000154175.e.a #24 Chinook salmon MODERN SPECIES 367 ENSOTSG00005026323 ##19 cfap300 (ENSOTSG00005026325) #22 ENSOTSG00005026327 Coho salmon MODERN SPECIES 20 ENSOKIG00005044424 ENSOKIG00005044442 ENSOKIG00005044490 PITPNA (ENSOKIG00005044499) ENSOKIG00005044544 SLC43A2 (ENSOKIG00005044615) ENSOKIG00005045516 ENSOKIG00005045519 ENSOKIG00005045521 ENSOKIG00005045532 mia (ENSOKIG00005045541) alg9 (ENSOKIG00005045587) ENSOKIG00005046260 dlat (ENSOKIG00005046286) ENSOKIG00005046476 ##19 CFAP300 (ENSOKIG00005046497) #22 ENSOKIG00005046505 #23 ENSOKIG00005046542 #24 SRSF1 (ENSOKIG00005046650) ENSOKIG00005046656 ENSOKIG00005046663 heatr6 (ENSOKIG00005046679) Northern pike MODERN SPECIES 6 fdxacb1 (ENSELUG00000011250) alg9 (ENSELUG00000011298) ENSELUG00000011321 hoatz (ENSELUG00000011334) btg4 (ENSELUG00000000405) bud13 (ENSELUG00000011399) C1QB (ENSELUG00000011414) c1qc (ENSELUG00000011428) c1qa (ENSELUG00000011469) ENSELUG00000026932 arhgap42a (ENSELUG00000011507) ##17 ENSELUG00000011521 ##19 ENSELUG00000011544 ENSELUG00000000416 ANGPTL5 (ENSELUG00000028073) #20 cfap300 (ENSELUG00000018706) #22 YAP1 (ENSELUG00000018680) #23 birc2 (ENSELUG00000018634) #24 POLQ (ENSELUG00000018460) ENSELUG00000018380 rpl23a (ENSELUG00000000777) tlcd1 (ENSELUG00000018334) ENSELUG00000018326 ENSELUG00000028142 ENSELUG00000028225 pigs (ENSELUG00000018267) ENSELUG00000025542 ENSELUG00000000767 DYNLL2 (ENSELUG00000018207) ENSELUG00000018194 heatr6 (ENSELUG00000000752) Osteoglossiformes ANCESTRAL SPECIES 264 ENSGT00390000010352 ENSGT00940000153733.A ENSGT00940000155453 ENSGT00440000034259.b ENSGT00940000156875 ENSGT00940000166008 ENSGT00940000160942 ENSGT00940000158694 ENSGT00940000154175 #24 ENSGT00510000047559 #22 ENSGT00510000046760.a.bb #23 ENSGT01060000248588.a.d.a #19 ENSGT00940000155492.a.a ##17 ENSGT00950000183204.a.a.a.b ENSGT00950000183204.a.a.a.a ENSGT00940000162143 ENSGT00940000161227 ENSGT00940000161091 ENSGT00390000007968 ENSGT00390000014500 ENSGT00390000012429 ENSGT00940000156933.d.b P. kingsleyae MODERN SPECIES 63 FNDC3A (ENSPKIG00000014879) rb1 (ENSPKIG00000014925) b4galt4 (ENSPKIG00000014983) zbtb20 (ENSPKIG00000015018) dub (ENSPKIG00000015032) ndufc2 (ENSPKIG00000015053) alg8 (ENSPKIG00000015070) ccdc90b (ENSPKIG00000015115) pcf11 (ENSPKIG00000015149) rab30 (ENSPKIG00000015202) ENSPKIG00000015222 nars2 (ENSPKIG00000015253) USP35 (ENSPKIG00000015301) POLQ (ENSPKIG00000015375) birc2 (ENSPKIG00000015531) #24 cfap300 (ENSPKIG00000015569) #22 ENSPKIG00000015590 #23 trpc6a (ENSPKIG00000015647) #19 arhgap42a (ENSPKIG00000015764) ##17 FBXO40 (ENSPKIG00000015882) fbxo40.1 (ENSPKIG00000015900) c1qa (ENSPKIG00000015920) ttc36 (ENSPKIG00000015965) ENSPKIG00000015943 bud13 (ENSPKIG00000015986) ENSPKIG00000016023 nectin1a (ENSPKIG00000016042) ENSPKIG00000016062 ENSPKIG00000016073 ENSPKIG00000016092 cdon (ENSPKIG00000016112) Spotted gar MODERN SPECIES 669 picalma (ENSLOCG00000005274) ccdc83 (ENSLOCG00000005301) ENSLOCG00000018195 ENSLOCG00000005338 ENSLOCG00000005355 tmem126a (ENSLOCG00000005364) ENSLOCG00000005399 dlg2 (ENSLOCG00000005438) fbxo40.1 (ENSLOCG00000005461) cntn5 (ENSLOCG00000005476) #16 arhgap42a (ENSLOCG00000005493) #17 pgr (ENSLOCG00000005538) #18 trpc6a (ENSLOCG00000005553) #19 ANGPTL5 (ENSLOCG00000005594) #20 ENSLOCG00000005619 #21 cfap300 (ENSLOCG00000005645) #22 yap1 (ENSLOCG00000005660) #23 birc2 (ENSLOCG00000005681) #24 ENSLOCG00000005696 ##11 POLQ (ENSLOCG00000005709) USP35 (ENSLOCG00000005724) GAB2 (ENSLOCG00000005755) nars2 (ENSLOCG00000005772) tenm4 (ENSLOCG00000005799) cmah (ENSLOCG00000005814) FAM181B (ENSLOCG00000018197) prcp (ENSLOCG00000005836) ENSLOCG00000005869 rab30 (ENSLOCG00000005884) pcf11 (ENSLOCG00000005901) ANKRD42 (ENSLOCG00000005924) Reedfish MODERN SPECIES 12 CCDC83 (ENSECRG00000008140) SYTL2 (ENSECRG00000008187) CREBZF (ENSECRG00000008283) tmem126a (ENSECRG00000008290) ENSECRG00000008301 dlg2 (ENSECRG00000008325) fbxo40.1 (ENSECRG00000008353) ENSECRG00000008360 cntn5 (ENSECRG00000008426) #16 ENSECRG00000008511 arhgap42a (ENSECRG00000008529) #17 pgr (ENSECRG00000008552) #18 trpc6a (ENSECRG00000008591) #19 ANGPTL5 (ENSECRG00000008638) #20 ENSECRG00000008652 #21 cfap300 (ENSECRG00000008664) #22 yap1 (ENSECRG00000008693) #23 ENSECRG00000008722 ENSECRG00000008725 birc2 (ENSECRG00000008754) #24 ENSECRG00000008828 #26 ENSECRG00000008867 ##11 ENSECRG00000008877 ENSECRG00000008884 ##11 POLQ (ENSECRG00000008961) USP35 (ENSECRG00000009091) GAB2 (ENSECRG00000009126) nars2 (ENSECRG00000009162) tenm4 (ENSECRG00000009196) ENSECRG00000009223 ENSECRG00000009239