Neopterygii	ANCESTRAL SPECIES	309												ENSGT01050000244956.a.a #18	ENSGT00940000160004 #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00940000160333	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b #24	ENSGT00390000006347.a	ENSGT01060000248595.b.a.b.a #29	ENSGT00940000164715 #28
Osteoglossocephalai	ANCESTRAL SPECIES	105	ENSGT00940000167812	ENSGT00940000158477.a.b	ENSGT00950000182959.b.a.b	ENSGT01030000234588.b.b.b.b.a.b.b	ENSGT00940000158477.a.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00940000157490	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004 #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000160333	ENSGT00940000153362.b #24	ENSGT00390000006347.a	ENSGT01060000248595.b.a.b.a.n.b ##29	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29
Clupeocephala	ANCESTRAL SPECIES	145	ENSGT00940000153901.a.b.a	ENSGT00940000177294	ENSGT01030000234990	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b	ENSGT00950000182959.b.a.b	ENSGT00920000149457	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004 #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159
Euteleosteomorpha	ANCESTRAL SPECIES	20	ENSGT00940000160201 #8	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Acanthomorphata	ANCESTRAL SPECIES	28	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000160004.d.b ##19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Euacanthomorphacea	ANCESTRAL SPECIES	7	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b #24	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Oryzias	ANCESTRAL SPECIES	27	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626.rb	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Oryzias_b	ANCESTRAL SPECIES		ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT01000000215262 #15	ENSGT00950000183002.A #16	ENSGT00940000156626.rb	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Javanese ricefish	MODERN SPECIES	20	fnbp4 (ENSOJAG00000001059) #7	agbl2 (ENSOJAG00000001047) #8	tmem17 (ENSOJAG00000001036) #9	SLC15A5 (ENSOJAG00000001028) #10	ccdc34 (ENSOJAG00000001020) #11	RAB19 (ENSOJAG00000001010) #12	hdhd5 (ENSOJAG00000001004) #13	ccdc77 (ENSOJAG00000000995) #14	ENSOJAG00000000983 #15	ush1c (ENSOJAG00000000904) #16	kcnj11 (ENSOJAG00000000839) #17	mob2a (ENSOJAG00000000830) #18	dusp8a (ENSOJAG00000000815) #19	PTPN5 (ENSOJAG00000000807) #20	ENSOJAG00000000785 #21	OSBPL5 (ENSOJAG00000000563) #22	phlda2 (ENSOJAG00000000506) #23	nap1l4b (ENSOJAG00000000488) #24	th (ENSOJAG00000000427) #25	igf2b (ENSOJAG00000000406) #26	mrpl23 (ENSOJAG00000000400) #27	ENSOJAG00000000379 #28	CPT1A (ENSOJAG00000000267) #29	ENSOJAG00000000160 #30	ENSOJAG00000000124 #31	spty2d1 (ENSOJAG00000000097) #32	tmem86a (ENSOJAG00000018198) #33	ENSOJAG00000018182 #34	ENSOJAG00000018162 #35	ENSOJAG00000018148 #36	B4GALNT4 (ENSOJAG00000018050) #37
Indian medaka	MODERN SPECIES	15	RAB19 (ENSOMEG00000023402) #12	hdhd5 (ENSOMEG00000023397) #13	ccdc77 (ENSOMEG00000023414) #14	ENSOMEG00000023422 #15	ush1c (ENSOMEG00000023460) #16	abcc8 (ENSOMEG00000023549)	kcnj11 (ENSOMEG00000023565) #17	mob2a (ENSOMEG00000023573) #18	dusp8a (ENSOMEG00000023588) #19	PTPN5 (ENSOMEG00000023600) #20	ENSOMEG00000023664 #21	ENSOMEG00000023894	ENSOMEG00000023893	ENSOMEG00000023891	ENSOMEG00000023890	OSBPL5 (ENSOMEG00000023888) #22	phlda2 (ENSOMEG00000023886) #23	nap1l4b (ENSOMEG00000023882) #24	th (ENSOMEG00000023878) #25	igf2b (ENSOMEG00000023877) #26
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626.rb	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b #24	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157462.C.d	ENSGT00940000153201	ENSGT00940000153903.a.b.a	ENSGT00940000153903.a.b.b	ENSGT00940000155653.b
Japanese Medaka HdrR	MODERN SPECIES	20	abcc8 (ENSORLG00000016552)	ENSORLG00000028767 ##17	mob2a (ENSORLG00000025111) #18	dusp8a (ENSORLG00000023597) #19	ENSORLG00000021785	ENSORLG00000027067 #20	ENSORLG00000029761 #20	ENSORLG00000028466	ENSORLG00000026283	ENSORLG00000025658	ENSORLG00000022493	ENSORLG00000029831	ENSORLG00000027452 #21	ENSORLG00000025467	ENSORLG00000023418	OSBPL5 (ENSORLG00000015578) #22	ENSORLG00000026646	phlda2 (ENSORLG00000018983) #23	nap1l4b (ENSORLG00000018973) #24	ENSORLG00000022094	th (ENSORLG00000018964) #25	igf2b (ENSORLG00000026863) #26	ENSORLG00000029075	ENSORLG00000028415	ENSORLG00000024914	ENSORLG00000024400	ENSORLG00000022958	ENSORLG00000028425	mrpl23 (ENSORLG00000025383) #27	ENSORLG00000029604 #28	CPT1A (ENSORLG00000030183) #29
Chinese medaka	MODERN SPECIES	1403																ENSOSIG00000001277 #22
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Aplocheiloidei	ANCESTRAL SPECIES	1	ENSGT00940000160201 #8	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Mangrove rivulus	MODERN SPECIES	45	ENSKMAG00000000758	ENSKMAG00000000764	SLC15A5 (ENSKMAG00000000775) #10	ccdc34 (ENSKMAG00000000788) #11	RAB19 (ENSKMAG00000000799) #12	hdhd5 (ENSKMAG00000000812) #13	ccdc77 (ENSKMAG00000000827) #14	ush1c (ENSKMAG00000000909) #16	abcc8 (ENSKMAG00000001028)	kcnj11 (ENSKMAG00000001224) #17	mob2a (ENSKMAG00000001239) #18	dusp8a (ENSKMAG00000001272) #19	PTPN5 (ENSKMAG00000001291) #20	ENSKMAG00000001301	ENSKMAG00000001319 #21	OSBPL5 (ENSKMAG00000001353) #22	phlda2 (ENSKMAG00000001458) #23	nap1l4a (ENSKMAG00000001485)	th (ENSKMAG00000001508) #25	igf2b (ENSKMAG00000001586) #26	mrpl23 (ENSKMAG00000001599) #27	ENSKMAG00000001630 #28	CPT1A (ENSKMAG00000001650) #29	ENSKMAG00000001729 #30	ENSKMAG00000001789 #31	spty2d1 (ENSKMAG00000001827) #32	tmem86a (ENSKMAG00000001833) #33
Turquoise killifish	MODERN SPECIES	1622	FNBP4 (ENSNFUG00015024371) #7	agbl2 (ENSNFUG00015024365) #8	TMEM17 (ENSNFUG00015024356) #9	ENSNFUG00015024355	SLC15A5 (ENSNFUG00015024351) #10	ENSNFUG00015024347	RAB19 (ENSNFUG00015024345) #12	CECR5 (ENSNFUG00015024340) #13	ccdc77 (ENSNFUG00015024335) #14	USH1C (ENSNFUG00015024292) #16	abcc8 (ENSNFUG00015019713)	KCNJ11 (ENSNFUG00015019400) #17	MOB2A (ENSNFUG00015019393) #18	DUSP8A (ENSNFUG00015019392) #19	PTPN5 (ENSNFUG00015019379) #20	OSBPL5 (ENSNFUG00015019039) #22	PHLDA2 (ENSNFUG00015019031) #23	NAP1L4A (ENSNFUG00015018920)	TH (ENSNFUG00015018175) #25	IGF2B (ENSNFUG00015018144) #26	ENSNFUG00015018140	mrpl23 (ENSNFUG00015018133) #27	Nfu_g_1_008143 (ENSNFUG00015018130) #28	CPT1A (ENSNFUG00015018102) #29	ENSNFUG00015018089 #30	UEVLD (ENSNFUG00015018066)	SPTY2D1 (ENSNFUG00015018059)	TMEM86A (ENSNFUG00015018051) #33	ENSNFUG00015018046	SCARA3 (ENSNFUG00015018041)	ENSNFUG00015018039
Cyprinodontoidei	ANCESTRAL SPECIES	7	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
NAME_4	ANCESTRAL SPECIES	51	ENSGT00940000160201 #8	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Mummichog	MODERN SPECIES	529								ccdc77 (ENSFHEG00000011384) #14	ush1c (ENSFHEG00000011358) #16	abcc8 (ENSFHEG00000011313)	kcnj11 (ENSFHEG00000011225) #17	mob2a (ENSFHEG00000011213) #18	dusp8a (ENSFHEG00000011189) #19	PTPN5 (ENSFHEG00000011184) #20	ENSFHEG00000011144 #21	OSBPL5 (ENSFHEG00000011128) #22	phlda2 (ENSFHEG00000011079) #23	nap1l4a (ENSFHEG00000011047)	th (ENSFHEG00000011030) #25	igf2b (ENSFHEG00000010989) #26	mrpl23 (ENSFHEG00000010978) #27	ENSFHEG00000010957 #28	CPT1A (ENSFHEG00000010907) #29	ENSFHEG00000010774 #30	ENSFHEG00000010693 #31	spty2d1 (ENSFHEG00000010640) #32	tmem86a (ENSFHEG00000010634) #33	B4GALNT4 (ENSFHEG00000010606) #37	ABTB2 (ENSFHEG00000010362)	BRSK2 (ENSFHEG00000010260)	ldha (ENSFHEG00000010165)
Sheepshead minnow	MODERN SPECIES	366	ENSCVAG00000003159	SLC15A5 (ENSCVAG00000003150) #10	ccdc34 (ENSCVAG00000003134) #11	RAB19 (ENSCVAG00000003126) #12	hdhd5 (ENSCVAG00000003109) #13	ccdc77 (ENSCVAG00000003101) #14	ush1c (ENSCVAG00000003086) #16	abcc8 (ENSCVAG00000003058)	kcnj11 (ENSCVAG00000003013) #17	mob2a (ENSCVAG00000003005) #18	dusp8a (ENSCVAG00000000661) #19	ENSCVAG00000002985	PTPN5 (ENSCVAG00000002976) #20	ENSCVAG00000002967 #21	ENSCVAG00000002951 #21	OSBPL5 (ENSCVAG00000002927) #22	phlda2 (ENSCVAG00000002872) #23	nap1l4a (ENSCVAG00000002863)	th (ENSCVAG00000002841) #25	igf2b (ENSCVAG00000002826) #26	mrpl23 (ENSCVAG00000002822) #27
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b #24	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Poecilia	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
NAME_6	ANCESTRAL SPECIES	70	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000153362.b #24	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Amazon molly	MODERN SPECIES	376	ENSPFOG00000012628	SLC15A5 (ENSPFOG00000012631) #10	ccdc34 (ENSPFOG00000012706) #11	RAB19 (ENSPFOG00000012720) #12	hdhd5 (ENSPFOG00000012734) #13	ccdc77 (ENSPFOG00000012790) #14	ush1c (ENSPFOG00000012885) #16	abcc8 (ENSPFOG00000013039)	kcnj11 (ENSPFOG00000020136) #17	ENSPFOG00000020137	mob2a (ENSPFOG00000013609) #18	dusp8a (ENSPFOG00000013641) #19	PTPN5 (ENSPFOG00000013661) #20	ENSPFOG00000013743 #21	ENSPFOG00000013844 #21	OSBPL5 (ENSPFOG00000013862) #22	phlda2 (ENSPFOG00000020139) #23	nap1l4a (ENSPFOG00000013985)	th (ENSPFOG00000014072) #25	igf2b (ENSPFOG00000014112) #26	mrpl23 (ENSPFOG00000014159) #27	ENSPFOG00000014178 #28	CPT1A (ENSPFOG00000014240) #29	ENSPFOG00000014459 #30	ENSPFOG00000014535 #31
Sailfin molly	MODERN SPECIES	1113															ENSPLAG00000003189 #21	OSBPL5 (ENSPLAG00000003177) #22	phlda2 (ENSPLAG00000003162) #23	nap1l4b (ENSPLAG00000003148) #24	th (ENSPLAG00000003125) #25	igf2b (ENSPLAG00000003099) #26
Guppy	MODERN SPECIES	458	tmem17 (ENSPREG00000020736) #9	ENSPREG00000020692	ENSPREG00000020664	SLC15A5 (ENSPREG00000020633) #10	ccdc34 (ENSPREG00000020621) #11	RAB19 (ENSPREG00000020603) #12	hdhd5 (ENSPREG00000020593) #13	ccdc77 (ENSPREG00000020567) #14	ush1c (ENSPREG00000020536) #16	abcc8 (ENSPREG00000020311)	kcnj11 (ENSPREG00000020250) #17	mob2a (ENSPREG00000020228) #18	dusp8a (ENSPREG00000020211) #19	PTPN5 (ENSPREG00000020172) #20	ENSPREG00000020153 #21	OSBPL5 (ENSPREG00000020135) #22	phlda2 (ENSPREG00000020116) #23	nap1l4a (ENSPREG00000020100)	th (ENSPREG00000020052) #25	igf2 (ENSPREG00000019975) #26	mrpl23 (ENSPREG00000019951) #27	ENSPREG00000019917 #28	CPT1A (ENSPREG00000019861) #29	ENSPREG00000019811 #30	ENSPREG00000019784 #31	spty2d1 (ENSPREG00000019769) #32	tmem86a (ENSPREG00000019727) #33	B4GALNT4 (ENSPREG00000019698) #37	ABTB2 (ENSPREG00000019630)	BRSK2 (ENSPREG00000019521)	ldha (ENSPREG00000019471)
Platyfish	MODERN SPECIES	11	RAB19 (ENSXMAG00000019264) #12	hdhd5 (ENSXMAG00000019263) #13	ccdc77 (ENSXMAG00000019260) #14	ush1c (ENSXMAG00000019258) #16	abcc8 (ENSXMAG00000019243)	kcnj11 (ENSXMAG00000026465) #17	mob2a (ENSXMAG00000022623) #18	dusp8a (ENSXMAG00000029104) #19	PTPN5 (ENSXMAG00000027813) #20	ENSXMAG00000025057	ENSXMAG00000021724	ENSXMAG00000022138	ENSXMAG00000023154	ENSXMAG00000024810	ENSXMAG00000018596 #21	OSBPL5 (ENSXMAG00000018609) #22	phlda2 (ENSXMAG00000019767) #23	nap1l4b (ENSXMAG00000022270) #24	th (ENSXMAG00000025487) #25	igf2b (ENSXMAG00000026239) #26	mrpl23 (ENSXMAG00000015496) #27	ENSXMAG00000015493 #28	CPT1A (ENSXMAG00000015395) #29	ENSXMAG00000026683 #30	ENSXMAG00000024578 #31	spty2d1 (ENSXMAG00000015340) #32	tmem86a (ENSXMAG00000015336) #33	B4GALNT4 (ENSXMAG00000028406) #37	ABTB2 (ENSXMAG00000015256)	BRSK2 (ENSXMAG00000015186)	ldha (ENSXMAG00000022304)
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Pomacentridae	ANCESTRAL SPECIES	1	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Pomacentridae_A	ANCESTRAL SPECIES	27	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Amphiprion	ANCESTRAL SPECIES	21	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Clown anemonefish	MODERN SPECIES	1085											mob2a (ENSAOCG00000008669) #18	dusp8a (ENSAOCG00000008629) #19	PTPN5 (ENSAOCG00000002626) #20	ENSAOCG00000008553 #21	ENSAOCG00000008506 #21	OSBPL5 (ENSAOCG00000008475) #22
Orange clownfish	MODERN SPECIES	18	ENSAPEG00000011223	ENSAPEG00000011213	SLC15A5 (ENSAPEG00000011174) #10	ccdc34 (ENSAPEG00000011150) #11	RAB19 (ENSAPEG00000011135) #12	hdhd5 (ENSAPEG00000011119) #13	ccdc77 (ENSAPEG00000011101) #14	ush1c (ENSAPEG00000011077) #16	abcc8 (ENSAPEG00000010930)	kcnj11 (ENSAPEG00000010911) #17	mob2a (ENSAPEG00000010878) #18	dusp8a (ENSAPEG00000010753) #19	PTPN5 (ENSAPEG00000010682) #20	ENSAPEG00000010646 #21	ENSAPEG00000010608 #21	OSBPL5 (ENSAPEG00000010496) #22	phlda2 (ENSAPEG00000010461) #23	nap1l4a (ENSAPEG00000010404)	th (ENSAPEG00000010338) #25	igf2b (ENSAPEG00000010328) #26	mrpl23 (ENSAPEG00000010298) #27	ENSAPEG00000010250 #28	CPT1A (ENSAPEG00000010158) #29	ENSAPEG00000010086 #30	uevld (ENSAPEG00000009988)	spty2d1 (ENSAPEG00000009961) #32	tmem86a (ENSAPEG00000009944) #33	B4GALNT4 (ENSAPEG00000009874) #37	ABTB2 (ENSAPEG00000009791)	BRSK2 (ENSAPEG00000009703)	ldha (ENSAPEG00000009620)
Spiny chromis	MODERN SPECIES	174											dusp8a (ENSAPOG00000012804) #19	PTPN5 (ENSAPOG00000012845) #20	ENSAPOG00000012898	ENSAPOG00000012935 #21	ENSAPOG00000012984 #21	OSBPL5 (ENSAPOG00000013008) #22	phlda2 (ENSAPOG00000013030) #23	nap1l4a (ENSAPOG00000013089)	th (ENSAPOG00000013175) #25	igf2b (ENSAPOG00000013186) #26	mrpl23 (ENSAPOG00000013198) #27	ENSAPOG00000013246 #28	CPT1A (ENSAPOG00000013348) #29	ENSAPOG00000013421 #30	uevld (ENSAPOG00000013438)	ENSAPOG00000013452	tmem86a (ENSAPOG00000013470) #33	IGSF22 (ENSAPOG00000013485)
Cichlidae	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000160201 #8	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.f	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Haplochromini_B	ANCESTRAL SPECIES	40	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.f	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00530000063825.A.c.f.e	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Zebra mbuna	MODERN SPECIES	1110	th (ENSMZEG00005017439) #25	nap1l4a (ENSMZEG00005017428)	phlda2 (ENSMZEG00005017422) #23	SLC15A5 (ENSMZEG00005017416) #10	ccdc34 (ENSMZEG00005017412) #11	RAB19 (ENSMZEG00005017407) #12	hdhd5 (ENSMZEG00005017405) #13	ccdc77 (ENSMZEG00005017396) #14	ush1c (ENSMZEG00005017390) #16	abcc8 (ENSMZEG00005017373)	kcnj11 (ENSMZEG00005017366) #17	mob2a (ENSMZEG00005017364) #18	dusp8a (ENSMZEG00005017357) #19	PTPN5 (ENSMZEG00005017350) #20	ENSMZEG00005017345 #21	OSBPL5 (ENSMZEG00005017339) #22	endouc (ENSMZEG00005017335)	ENSMZEG00005017325	tmem17 (ENSMZEG00005017323) #9	agbl2 (ENSMZEG00005017319) #8	ENSMZEG00005017311	fnbp4 (ENSMZEG00005017308) #7	ENSMZEG00005017305	ENSMZEG00005017302	cnot2 (ENSMZEG00005017275)	WASHC4 (ENSMZEG00005017251)	SLC41A2 (ENSMZEG00005017242)	etfbkmt (ENSMZEG00005017239)	si:ch73-62b13.1 (ENSMZEG00005017237)	mterf2 (ENSMZEG00005017233)	zgc:153031 (ENSMZEG00005017228)
Eastern happy	MODERN SPECIES	19	agbl2 (ENSACLG00000003920) #8	ENSACLG00000003907	SLC15A5 (ENSACLG00000003893) #10	ENSACLG00000003884	RAB19 (ENSACLG00000003864) #12	hdhd5 (ENSACLG00000003846) #13	ccdc77 (ENSACLG00000003804) #14	ush1c (ENSACLG00000003752) #16	abcc8 (ENSACLG00000003691)	kcnj11 (ENSACLG00000003124) #17	mob2a (ENSACLG00000003081) #18	dusp8a (ENSACLG00000003062) #19	PTPN5 (ENSACLG00000003025) #20	ENSACLG00000003011 #21	ENSACLG00000002969 #21	OSBPL5 (ENSACLG00000002936) #22	endouc (ENSACLG00000002802)	phlda2 (ENSACLG00000002779) #23	nap1l4a (ENSACLG00000002761)	th (ENSACLG00000002667) #25	igf2b (ENSACLG00000002592) #26	mrpl23 (ENSACLG00000002565) #27	ENSACLG00000002284 #28	CPT1A (ENSACLG00000002222) #29	ENSACLG00000002172 #30	uevld (ENSACLG00000002158)	spty2d1 (ENSACLG00000002153) #32	tmem86a (ENSACLG00000002146) #33	ENSACLG00000002124	B4GALNT4 (ENSACLG00000002102) #37	ABTB2 (ENSACLG00000001589)
P. nyererei	MODERN SPECIES	373															ENSPNYG00000015726 #21	OSBPL5 (ENSPNYG00000015658) #22	phlda2 (ENSPNYG00000015634) #23	nap1l4a (ENSPNYG00000015622)	th (ENSPNYG00000015595) #25	igf2b (ENSPNYG00000015570) #26	mrpl23 (ENSPNYG00000015541) #27	ENSPNYG00000015527 #28	CPT1A (ENSPNYG00000015485) #29	ENSPNYG00000015438 #30	uevld (ENSPNYG00000015419)	ENSPNYG00000015410	spty2d1 (ENSPNYG00000015376) #32	tmem86a (ENSPNYG00000015365) #33	B4GALNT4 (ENSPNYG00000015331) #37	ABTB2 (ENSPNYG00000015269)	BRSK2 (ENSPNYG00000015210)
Burton s mouthbrooder	MODERN SPECIES	1229														ENSHBUG00000009706 #21	ENSHBUG00000009685 #21	OSBPL5 (ENSHBUG00000000250) #22	endouc (ENSHBUG00000009625)
Lyretail cichlid	MODERN SPECIES	305											ENSNBRG00000007443 ##17	MOB2 (ENSNBRG00000007415) #18	dusp8a (ENSNBRG00000007404) #19	PTPN5 (ENSNBRG00000007374) #20	ENSNBRG00000007349 #21	OSBPL5 (ENSNBRG00000007302) #22	phlda2 (ENSNBRG00000007287) #23	nap1l4a (ENSNBRG00000007252)	th (ENSNBRG00000007209) #25	igf2b (ENSNBRG00000007203) #26	mrpl23 (ENSNBRG00000007183) #27	ENSNBRG00000007151 #28	CPT1A (ENSNBRG00000007101) #29	ENSNBRG00000007083	ENSNBRG00000007079	spty2d1 (ENSNBRG00000007070) #32	tmem86a (ENSNBRG00000007062) #33	B4GALNT4 (ENSNBRG00000006940) #37	ABTB2 (ENSNBRG00000006897)	BRSK2 (ENSNBRG00000006861)	ldha (ENSNBRG00000006820)
Nile tilapia	MODERN SPECIES	19	ENSONIG00000010479	ENSONIG00000032111	SLC15A5 (ENSONIG00000010484) #10	ENSONIG00000043128	ENSONIG00000032936	RAB19 (ENSONIG00000038252) #12	hdhd5 (ENSONIG00000010486) #13	ccdc77 (ENSONIG00000010489) #14	ush1c (ENSONIG00000010490) #16	abcc8 (ENSONIG00000010493)	kcnj11 (ENSONIG00000010513) #17	mob2a (ENSONIG00000035681) #18	dusp8a (ENSONIG00000028676) #19	PTPN5 (ENSONIG00000010519) #20	ENSONIG00000037111	OSBPL5 (ENSONIG00000009684) #22	ENSONIG00000029488	phlda2 (ENSONIG00000020439) #23	nap1l4a (ENSONIG00000014488)	th (ENSONIG00000014492) #25	igf2b (ENSONIG00000039552) #26	mrpl23 (ENSONIG00000033240) #27	ENSONIG00000014501 #28	CPT1A (ENSONIG00000014502) #29	ENSONIG00000014519 #30	uevld (ENSONIG00000014522)	spty2d1 (ENSONIG00000014525) #32	tmem86a (ENSONIG00000038141) #33	B4GALNT4 (ENSONIG00000014531) #37	ABTB2 (ENSONIG00000014537)	BRSK2 (ENSONIG00000014540)
Midas cichlid	MODERN SPECIES	684															ENSACIG00000023554 #21	OSBPL5 (ENSACIG00000023561) #22	phlda2 (ENSACIG00000023569) #23	nap1l4a (ENSACIG00000023580)	th (ENSACIG00000023618) #25	igf2b (ENSACIG00000023647) #26
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Eupercaria	ANCESTRAL SPECIES	6	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Tetraodontidae	ANCESTRAL SPECIES	11	ENSGT00390000003450 #7	ENSGT00940000160201 #8	ENSGT00940000153899.b.b #9	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b.b
Fugu	MODERN SPECIES	21	ENSTRUG00000026408	bscl2 (ENSTRUG00000003547)	fnbp4 (ENSTRUG00000003562) #7	agbl2 (ENSTRUG00000004266) #8	tmem17 (ENSTRUG00000023645) #9	SLC15A5 (ENSTRUG00000004768) #10	ENSTRUG00000032928 #11	RAB19 (ENSTRUG00000005058) #12	hdhd5 (ENSTRUG00000005290) #13	ccdc77 (ENSTRUG00000005468) #14	kcnj11 (ENSTRUG00000007184) #17	mob2 (ENSTRUG00000032638) #18	dusp8a (ENSTRUG00000007284) #19	PTPN5 (ENSTRUG00000007518) #20	ENSTRUG00000007719 #21	OSBPL5 (ENSTRUG00000008311) #22	phlda2 (ENSTRUG00000008836) #23	ENSTRUG00000008856	th (ENSTRUG00000009267) #25	IGF2 (ENSTRUG00000030443) #26	mrpl23 (ENSTRUG00000009637) #27	CPT1A (ENSTRUG00000009681) #29	ENSTRUG00000009911 #30	ENSTRUG00000009935 #31	spty2d1 (ENSTRUG00000010064) #32	tmem86a (ENSTRUG00000010152) #33	B4GALNT4 (ENSTRUG00000010186) #37	ABTB2 (ENSTRUG00000010317)	BRSK2 (ENSTRUG00000010512)	ldha (ENSTRUG00000010800)	tsg101a (ENSTRUG00000010968)
Tetraodon	MODERN SPECIES	4	bscl2 (ENSTNIG00000008352)	fnbp4 (ENSTNIG00000008351) #7	agbl2 (ENSTNIG00000008350) #8	tmem17 (ENSTNIG00000001219) #9	SLC15A5 (ENSTNIG00000008349) #10	RAB19 (ENSTNIG00000006650) #12	hdhd5 (ENSTNIG00000006649) #13	ccdc77 (ENSTNIG00000006648) #14	ush1c (ENSTNIG00000006647) #16	abcc8 (ENSTNIG00000006646)	kcnj11 (ENSTNIG00000006645) #17	mob2a (ENSTNIG00000006644) #18	dusp8a (ENSTNIG00000006726) #19	PTPN5 (ENSTNIG00000019775) #20	ENSTNIG00000010468 #21	OSBPL5 (ENSTNIG00000010467) #22	phlda2 (ENSTNIG00000001230) #23	nap1l4a (ENSTNIG00000010466)	th (ENSTNIG00000010465) #25	igf2b (ENSTNIG00000010464) #26	mrpl23 (ENSTNIG00000010463) #27	ENSTNIG00000010462 #28	CPT1A (ENSTNIG00000010461) #29	ENSTNIG00000010460 #30	uevld (ENSTNIG00000010459)	spty2d1 (ENSTNIG00000010458) #32	tmem86a (ENSTNIG00000010457) #33	ENSTNIG00000010456	ENSTNIG00000010455	B4GALNT4 (ENSTNIG00000010454) #37	ENSTNIG00000010453
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000177179	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Ballan wrasse	MODERN SPECIES	6	ENSLBEG00000003739	SLC15A5 (ENSLBEG00000003676) #10	rabl2 (ENSLBEG00000003644)	ccdc34 (ENSLBEG00000003624) #11	RAB19 (ENSLBEG00000003589) #12	hdhd5 (ENSLBEG00000003565) #13	ccdc77 (ENSLBEG00000003536) #14	ush1c (ENSLBEG00000003367) #16	abcc8 (ENSLBEG00000003141)	kcnj11 (ENSLBEG00000003085) #17	mob2a (ENSLBEG00000003030) #18	dusp8a (ENSLBEG00000002969) #19	PTPN5 (ENSLBEG00000002935) #20	ENSLBEG00000002906	ENSLBEG00000002868 #21	OSBPL5 (ENSLBEG00000002829) #22	phlda2 (ENSLBEG00000002794) #23	nap1l4a (ENSLBEG00000002740)	th (ENSLBEG00000002647) #25	igf2b (ENSLBEG00000002605) #26	mrpl23 (ENSLBEG00000002580) #27	ENSLBEG00000002536 #28	CPT1A (ENSLBEG00000002446) #29	ENSLBEG00000002275 #30	ENSLBEG00000002243 #31	spty2d1 (ENSLBEG00000002227) #32	tmem86a (ENSLBEG00000002214) #33	B4GALNT4 (ENSLBEG00000002186) #37	ABTB2 (ENSLBEG00000002138)	BRSK2 (ENSLBEG00000002070)	ldha (ENSLBEG00000002015)
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b
European seabass	MODERN SPECIES	19	agbl2 (ENSDLAG00005027255) #8	tmem17 (ENSDLAG00005001361) #9	ENSDLAG00005001385	ENSDLAG00005001392 #10	ccdc34 (ENSDLAG00005028597) #11	ENSDLAG00005033785 #12	hdhd5 (ENSDLAG00005001612) #13	ENSDLAG00005001627 #14	ush1c (ENSDLAG00005001656) #16	abcc8 (ENSDLAG00005001823)	kcnj11 (ENSDLAG00005002099) #17	mob2a (ENSDLAG00005028153) #18	dusp8a (ENSDLAG00005026479) #19	ENSDLAG00005002143 #20	ENSDLAG00005002182 #21	ENSDLAG00005002240 #22	ENSDLAG00005034234 #23	nap1l4a (ENSDLAG00005005001)	th (ENSDLAG00005005156) #25	igf2b (ENSDLAG00005035050) #26	mrpl23 (ENSDLAG00005031328) #27	ENSDLAG00005006747 #28	ENSDLAG00005006785 #29	ENSDLAG00005028220 #30	uevld (ENSDLAG00005008034)	spty2d1 (ENSDLAG00005008073) #32	tmem86a (ENSDLAG00005030964) #33	IGSF22 (ENSDLAG00005031376)	ENSDLAG00005008104 #37	ENSDLAG00005008300	ENSDLAG00005008477
Large yellow croaker	MODERN SPECIES	492	agbl2 (ENSLCRG00005015720) #8	tmem17 (ENSLCRG00005015721) #9	ENSLCRG00005015723	ENSLCRG00005015724	SLC15A5 (ENSLCRG00005015726) #10	ENSLCRG00005015727 #11	RAB19 (ENSLCRG00005015729) #12	ccdc77 (ENSLCRG00005015731) #14	ush1c (ENSLCRG00005015736) #16	abcc8 (ENSLCRG00005015744)	kcnj11 (ENSLCRG00005016069) #17	mob2a (ENSLCRG00005016071) #18	dusp8a (ENSLCRG00005016072) #19	PTPN5 (ENSLCRG00005016073) #20	ENSLCRG00005016099 #21	OSBPL5 (ENSLCRG00005016106) #22	phlda2 (ENSLCRG00005017074) #23	nap1l4a (ENSLCRG00005017075)	th (ENSLCRG00005017076) #25	igf2b (ENSLCRG00005017105) #26	mrpl23 (ENSLCRG00005017111) #27	ENSLCRG00005017120 #28	CPT1A (ENSLCRG00005017126) #29	ENSLCRG00005017473 #30	uevld (ENSLCRG00005017478)	spty2d1 (ENSLCRG00005017484) #32	tmem86a (ENSLCRG00005017488) #33	IGSF22 (ENSLCRG00005017490)	B4GALNT4 (ENSLCRG00005017498) #37	ABTB2 (ENSLCRG00005017730)	BRSK2 (ENSLCRG00005018116)
Gilthead seabream	MODERN SPECIES	22	ENSSAUG00010003182	ENSSAUG00010003200	ENSSAUG00010003209	SLC15A5 (ENSSAUG00010003212) #10	ccdc34 (ENSSAUG00010003216) #11	RAB19 (ENSSAUG00010003220) #12	hdhd5 (ENSSAUG00010003224) #13	ccdc77 (ENSSAUG00010003229) #14	ush1c (ENSSAUG00010003237) #16	abcc8 (ENSSAUG00010003560)	kcnj11 (ENSSAUG00010018638) #17	mob2a (ENSSAUG00010018640) #18	dusp8a (ENSSAUG00010018645) #19	PTPN5 (ENSSAUG00010018790) #20	ENSSAUG00010018945 #21	OSBPL5 (ENSSAUG00010019002) #22	phlda2 (ENSSAUG00010020886) #23	nap1l4a (ENSSAUG00010020888)	th (ENSSAUG00010020896) #25	igf2b (ENSSAUG00010020999) #26	mrpl23 (ENSSAUG00010021001) #27	ENSSAUG00010021003 #28	CPT1A (ENSSAUG00010021025) #29	ENSSAUG00010022294 #30	ENSSAUG00010022307 #31	spty2d1 (ENSSAUG00010022355) #32	tmem86a (ENSSAUG00010022356) #33	IGSF22 (ENSSAUG00010022360)	B4GALNT4 (ENSSAUG00010022368) #37	ABTB2 (ENSSAUG00010022380)	BRSK2 (ENSSAUG00010022402)
Perciformes	ANCESTRAL SPECIES	7	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Cottioidei	ANCESTRAL SPECIES	6	ENSGT00940000160201 #8	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Stickleback	MODERN SPECIES	14	SLC15A5 (ENSGACG00000010960) #10	ccdc34 (ENSGACG00000010963) #11	RAB19 (ENSGACG00000010965) #12	hdhd5 (ENSGACG00000010978) #13	ccdc77 (ENSGACG00000010988) #14	ush1c (ENSGACG00000011004) #16	abcc8 (ENSGACG00000011021)	ENSGACG00000011039	kcnj11 (ENSGACG00000011042) #17	mob2a (ENSGACG00000011046) #18	dusp8a (ENSGACG00000011050) #19	PTPN5 (ENSGACG00000011053) #20	ENSGACG00000011062 #21	ENSGACG00000011075	ENSGACG00000011077	OSBPL5 (ENSGACG00000011081) #22	nap1l4b (ENSGACG00000011095) #24	th (ENSGACG00000011104) #25	igf2b (ENSGACG00000011125) #26	mrpl23 (ENSGACG00000011130) #27	ENSGACG00000011138 #28	CPT1A (ENSGACG00000011141) #29	ENSGACG00000011173	ENSGACG00000011175 #12	tmem17 (ENSGACG00000011177) #9	ENSGACG00000011179 #30	ENSGACG00000011188 #31	spty2d1 (ENSGACG00000011238) #32	tmem86a (ENSGACG00000011243) #33	ENSGACG00000011246	ENSGACG00000011247 #37
Lumpfish	MODERN SPECIES	21	agbl2 (ENSCLMG00005002949) #8	tmem17 (ENSCLMG00005002919) #9	ENSCLMG00005002903	SLC15A5 (ENSCLMG00005002854) #10	ccdc34 (ENSCLMG00005023098) #11	RAB19 (ENSCLMG00005023097) #12	hdhd5 (ENSCLMG00005023096) #13	ccdc77 (ENSCLMG00005023095) #14	ush1c (ENSCLMG00005023093) #16	abcc8 (ENSCLMG00005023091)	kcnj11 (ENSCLMG00005023090) #17	mob2a (ENSCLMG00005023089) #18	dusp8a (ENSCLMG00005023088) #19	PTPN5 (ENSCLMG00005023087) #20	ENSCLMG00005023085 #21	OSBPL5 (ENSCLMG00005023063) #22	phlda2 (ENSCLMG00005023053) #23	nap1l4a (ENSCLMG00005023050)	th (ENSCLMG00005023045) #25	igf2b (ENSCLMG00005023042) #26	mrpl23 (ENSCLMG00005023040) #27	ENSCLMG00005023038 #28	CPT1A (ENSCLMG00005023013) #29	ENSCLMG00005022989 #30	uevld (ENSCLMG00005022987)	spty2d1 (ENSCLMG00005022985) #32	tmem86a (ENSCLMG00005022982) #33	B4GALNT4 (ENSCLMG00005022977) #37	ABTB2 (ENSCLMG00005022973)	BRSK2 (ENSCLMG00005022972)	ldha (ENSCLMG00005022968)
Perciformes_a	ANCESTRAL SPECIES	7	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Pike perch	MODERN SPECIES	6	ENSSLUG00000001621	ENSSLUG00000001610	SLC15A5 (ENSSLUG00000001593) #10	ccdc34 (ENSSLUG00000001581) #11	RAB19 (ENSSLUG00000001564) #12	hdhd5 (ENSSLUG00000001551) #13	ccdc77 (ENSSLUG00000001544) #14	ush1c (ENSSLUG00000001535) #16	ENSSLUG00000001524	abcc8 (ENSSLUG00000001314)	kcnj11 (ENSSLUG00000001271) #17	mob2a (ENSSLUG00000001266) #18	dusp8a (ENSSLUG00000001263) #19	PTPN5 (ENSSLUG00000001233) #20	ENSSLUG00000001229 #21	OSBPL5 (ENSSLUG00000000730) #22	phlda2 (ENSSLUG00000000550) #23	nap1l4a (ENSSLUG00000000520)	th (ENSSLUG00000000502) #25	igf2b (ENSSLUG00000000490) #26	ENSSLUG00000000486	mrpl23 (ENSSLUG00000000483) #27	ENSSLUG00000000475 #28	CPT1A (ENSSLUG00000000252) #29	ENSSLUG00000000127 #30	uevld (ENSSLUG00000000121)	spty2d1 (ENSSLUG00000000115) #32	tmem86a (ENSSLUG00000000106) #33	ABTB2 (ENSSLUG00000000096)	BRSK2 (ENSSLUG00000024148)	ldha (ENSSLUG00000024139)
Channel bull blenny	MODERN SPECIES	20	ENSCGOG00000004580	ENSCGOG00000004582	SLC15A5 (ENSCGOG00000004587) #10	ccdc34 (ENSCGOG00000004590) #11	RAB19 (ENSCGOG00000004592) #12	hdhd5 (ENSCGOG00000004594) #13	ccdc77 (ENSCGOG00000004595) #14	ndufa9a (ENSCGOG00000004601)	ush1c (ENSCGOG00000004613) #16	abcc8 (ENSCGOG00000004820)	kcnj11 (ENSCGOG00000009734) #17	mob2a (ENSCGOG00000009737) #18	dusp8a (ENSCGOG00000009760) #19	PTPN5 (ENSCGOG00000009773) #20	ENSCGOG00000009864 #21	OSBPL5 (ENSCGOG00000009917) #22	phlda2 (ENSCGOG00000011184) #23	nap1l4a (ENSCGOG00000011186)	th (ENSCGOG00000011200) #25	igf2b (ENSCGOG00000011317) #26	mrpl23 (ENSCGOG00000011406) #27	ENSCGOG00000011412 #28	CPT1A (ENSCGOG00000011521) #29	ENSCGOG00000017540 #30	uevld (ENSCGOG00000017561)	spty2d1 (ENSCGOG00000017592) #32	tmem86a (ENSCGOG00000017595) #33	B4GALNT4 (ENSCGOG00000017602) #37	ABTB2 (ENSCGOG00000017640)	BRSK2 (ENSCGOG00000017777)	ldha (ENSCGOG00000018548)
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000165530.b	ENSGT00940000157661.e.a
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.b	ENSGT00940000153201
Climbing perch	MODERN SPECIES	19	tmem17 (ENSATEG00000018865) #9	ENSATEG00000018870	ENSATEG00000018877	ENSATEG00000018891 #10	ccdc34 (ENSATEG00000018913) #11	RAB19 (ENSATEG00000027013) #12	hdhd5 (ENSATEG00000018947) #13	ENSATEG00000018956 #14	ush1c (ENSATEG00000018971) #16	abcc8 (ENSATEG00000018989)	kcnj11 (ENSATEG00000026954) #17	mob2a (ENSATEG00000019107) #18	dusp8a (ENSATEG00000019131) #19	ENSATEG00000019146 #20	ENSATEG00000019158 #21	ENSATEG00000019190 #22	ENSATEG00000019210 #23	nap1l4a (ENSATEG00000019230)	th (ENSATEG00000019262) #25	igf2b (ENSATEG00000027726) #26	mrpl23 (ENSATEG00000019314) #27	ENSATEG00000019339 #28	ENSATEG00000019367 #29	ENSATEG00000019460 #30	uevld (ENSATEG00000019496)	spty2d1 (ENSATEG00000019561) #32	tmem86a (ENSATEG00000027114) #33	ENSATEG00000019658 #37	ENSATEG00000019804	ENSATEG00000019882	ldha (ENSATEG00000019929)
Siamese fighting fish	MODERN SPECIES	17	tmem17 (ENSBSLG00000008372) #9	ENSBSLG00000008359	ENSBSLG00000008338	SLC15A5 (ENSBSLG00000008288) #10	ccdc34 (ENSBSLG00000012571) #11	RAB19 (ENSBSLG00000012549) #12	hdhd5 (ENSBSLG00000012544) #13	ccdc77 (ENSBSLG00000012533) #14	ush1c (ENSBSLG00000012313) #16	abcc8 (ENSBSLG00000008173)	kcnj11 (ENSBSLG00000008028) #17	mob2a (ENSBSLG00000007969) #18	dusp8a (ENSBSLG00000007949) #19	PTPN5 (ENSBSLG00000007806) #20	ENSBSLG00000007665 #21	OSBPL5 (ENSBSLG00000006847) #22	phlda2 (ENSBSLG00000006167) #23	nap1l4a (ENSBSLG00000006153)	th (ENSBSLG00000005632) #25	igf2b (ENSBSLG00000004911) #26	mrpl23 (ENSBSLG00000004796) #27	ENSBSLG00000004747 #28	CPT1A (ENSBSLG00000004304) #29	ENSBSLG00000004281 #30	uevld (ENSBSLG00000004240)	ENSBSLG00000004232	tmem86a (ENSBSLG00000004225) #33	B4GALNT4 (ENSBSLG00000004164) #37	ABTB2 (ENSBSLG00000004053)	BRSK2 (ENSBSLG00000003957)	ldha (ENSBSLG00000003863)
Zig-zag eel	MODERN SPECIES	20	agbl2 (ENSMAMG00000002743) #8	tmem17 (ENSMAMG00000028184) #9	ENSMAMG00000026887	ENSMAMG00000002792 #10	ccdc34 (ENSMAMG00000002837) #11	ENSMAMG00000025169 #12	hdhd5 (ENSMAMG00000002860) #13	ENSMAMG00000002879 #14	ush1c (ENSMAMG00000002896) #16	abcc8 (ENSMAMG00000002960)	kcnj11 (ENSMAMG00000003175) #17	mob2a (ENSMAMG00000025316) #18	dusp8a (ENSMAMG00000003190) #19	ENSMAMG00000003206 #20	ENSMAMG00000003276 #21	ENSMAMG00000003506 #22	ENSMAMG00000003512 #23	nap1l4a (ENSMAMG00000003526)	th (ENSMAMG00000003562) #25	igf2b (ENSMAMG00000025980) #26	mrpl23 (ENSMAMG00000003609) #27	ENSMAMG00000003639 #28	ENSMAMG00000003668 #29	ENSMAMG00000003781 #30	uevld (ENSMAMG00000003864)	spty2d1 (ENSMAMG00000003996) #32	tmem86a (ENSMAMG00000004015) #33	ENSMAMG00000004036 #37	ENSMAMG00000004112	ENSMAMG00000004222	ldha (ENSMAMG00000004268)
Carangaria	ANCESTRAL SPECIES	6	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a.d	ENSGT00940000165530.b
Carangaria_A	ANCESTRAL SPECIES		ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a.d	ENSGT00940000157462.C.c.b
Seriola	ANCESTRAL SPECIES	5	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00990000204369	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a.d	ENSGT00940000157462.C.c.b
Yellowtail amberjack	MODERN SPECIES	2945	tmem17 (ENSSLDG00000011093) #9	ENSSLDG00000011107	SLC15A5 (ENSSLDG00000011120) #10	ENSSLDG00000011137	RAB19 (ENSSLDG00000011167) #12	hdhd5 (ENSSLDG00000011194) #13	ccdc77 (ENSSLDG00000011232) #14	ush1c (ENSSLDG00000011287) #16	abcc8 (ENSSLDG00000011425)	kcnj11 (ENSSLDG00000011621) #17	mob2a (ENSSLDG00000011651) #18	dusp8a (ENSSLDG00000011695) #19	ENSSLDG00000011713 #20	ENSSLDG00000011750 #21	ENSSLDG00000011839 #21	OSBPL5 (ENSSLDG00000011869) #22	phlda2 (ENSSLDG00000011903) #23	nap1l4a (ENSSLDG00000011919)	th (ENSSLDG00000011976) #25	igf2b (ENSSLDG00000012038) #26	mrpl23 (ENSSLDG00000012055) #27	ENSSLDG00000012078 #28	CPT1A (ENSSLDG00000012099) #29	ENSSLDG00000012166 #30	uevld (ENSSLDG00000012216)	spty2d1 (ENSSLDG00000012243) #32	tmem86a (ENSSLDG00000012263) #33	IGSF22 (ENSSLDG00000012276)	B4GALNT4 (ENSSLDG00000012313) #37	ABTB2 (ENSSLDG00000012374)	BRSK2 (ENSSLDG00000012469)
Greater amberjack	MODERN SPECIES	82	fnbp4 (ENSSDUG00000020121) #7	agbl2 (ENSSDUG00000020103) #8	tmem17 (ENSSDUG00000020090) #9	ENSSDUG00000020083	SLC15A5 (ENSSDUG00000020060) #10	RAB19 (ENSSDUG00000020046) #12	hdhd5 (ENSSDUG00000020036) #13	ccdc77 (ENSSDUG00000020025) #14	ush1c (ENSSDUG00000019968) #16	abcc8 (ENSSDUG00000019907)	kcnj11 (ENSSDUG00000019894) #17	mob2a (ENSSDUG00000019872) #18	dusp8a (ENSSDUG00000019851) #19	PTPN5 (ENSSDUG00000019836) #20	ENSSDUG00000019821 #21	OSBPL5 (ENSSDUG00000019736) #22	phlda2 (ENSSDUG00000019713) #23	nap1l4a (ENSSDUG00000019681)	th (ENSSDUG00000019656) #25	igf2b (ENSSDUG00000019646) #26	mrpl23 (ENSSDUG00000019634) #27	ENSSDUG00000019606 #28	CPT1A (ENSSDUG00000019472) #29	ENSSDUG00000019412 #30	uevld (ENSSDUG00000019358)	spty2d1 (ENSSDUG00000019340) #32	tmem86a (ENSSDUG00000019334) #33	B4GALNT4 (ENSSDUG00000019305) #37	ABTB2 (ENSSDUG00000019236)	BRSK2 (ENSSDUG00000019194)	ldha (ENSSDUG00000019165)
Barramundi perch	MODERN SPECIES	97	ENSLCAG00010018947	ENSLCAG00010018944	ENSLCAG00010018942	SLC15A5 (ENSLCAG00010018939) #10	ccdc34 (ENSLCAG00010018937) #11	RAB19 (ENSLCAG00010018934) #12	hdhd5 (ENSLCAG00010018928) #13	ccdc77 (ENSLCAG00010018921) #14	ush1c (ENSLCAG00010018857) #16	abcc8 (ENSLCAG00010018693)	kcnj11 (ENSLCAG00010018630) #17	mob2a (ENSLCAG00010018611) #18	dusp8a (ENSLCAG00010018602) #19	PTPN5 (ENSLCAG00010018595) #20	ENSLCAG00010018576 #21	OSBPL5 (ENSLCAG00010018191) #22	phlda2 (ENSLCAG00010018141) #23	nap1l4a (ENSLCAG00010018135)	th (ENSLCAG00010018068) #25	igf2b (ENSLCAG00010018025) #26	mrpl23 (ENSLCAG00010018003) #27	ENSLCAG00010017998 #28	CPT1A (ENSLCAG00010017655) #29	ENSLCAG00010017613 #30	ENSLCAG00010017608 #31	spty2d1 (ENSLCAG00010017601) #32	tmem86a (ENSLCAG00010017592) #33	IGSF22 (ENSLCAG00010017577)	B4GALNT4 (ENSLCAG00010017531) #37	ENSLCAG00010017518	ENSLCAG00010017513
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00940000160201 #8	ENSGT00940000153899.b.b #9	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.a	ENSGT00940000158916 #10	ENSGT00730000111271 #11	ENSGT00940000156717.e #12	ENSGT00390000018051 #13	ENSGT00390000010251 #14	ENSGT00950000183002.A #16	ENSGT00940000156626.mb	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.c #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00950000182885.C.a #25	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000164715 #28	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b #37	ENSGT00940000157661.e.a.c.a	ENSGT00940000157462.C.c.b
Turbot	MODERN SPECIES	1	tmem17 (ENSSMAG00000029401) #9	agbl2 (ENSSMAG00000009802) #8	ENSSMAG00000009765 #10	ccdc34 (ENSSMAG00000009757) #11	ENSSMAG00000033870 #12	hdhd5 (ENSSMAG00000009740) #13	ENSSMAG00000009713 #14	ush1c (ENSSMAG00000009678) #16	abcc8 (ENSSMAG00000009551)	kcnj11 (ENSSMAG00000009539) #17	mob2a (ENSSMAG00000030422) #18	dusp8a (ENSSMAG00000032296) #19	ENSSMAG00000009506 #20	ENSSMAG00000036443 #21	ENSSMAG00000009497 #21	ENSSMAG00000009437 #22	ENSSMAG00000009424 #23	nap1l4a (ENSSMAG00000009379)	th (ENSSMAG00000009330) #25	igf2b (ENSSMAG00000023920) #26	mrpl23 (ENSSMAG00000009264) #27	ENSSMAG00000009240 #28	ENSSMAG00000009170 #29	ENSSMAG00000009142 #30	ENSSMAG00000009125 #31	spty2d1 (ENSSMAG00000009117) #32	tmem86a (ENSSMAG00000009109) #33	IGSF22 (ENSSMAG00000009087)	ENSSMAG00000009030 #37	ENSSMAG00000008949	ENSSMAG00000008855
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	16	SRGAP1 (ENSCSEG00000009265)	ENSCSEG00000009245	parp12a (ENSCSEG00000009223)	tbxas1 (ENSCSEG00000009189)	ENSCSEG00000009180	hipk2 (ENSCSEG00000009141)	ENSCSEG00000009086	mical3a (ENSCSEG00000009042)	ENSCSEG00000009030	ENSCSEG00000009012	kcnj11 (ENSCSEG00000009004) #17	mob2a (ENSCSEG00000008980) #18	dusp8a (ENSCSEG00000008955) #19	PTPN5 (ENSCSEG00000008920) #20	ENSCSEG00000008893 #21	OSBPL5 (ENSCSEG00000008867) #22	ENSCSEG00000008861 #22	phlda2 (ENSCSEG00000008851) #23	nap1l4a (ENSCSEG00000008814)	th (ENSCSEG00000008767) #25	igf2 (ENSCSEG00000008746) #26	mrpl23 (ENSCSEG00000008738) #27	ENSCSEG00000008380 #28	CPT1A (ENSCSEG00000008255) #29	ENSCSEG00000008239 #30	uevld (ENSCSEG00000008221)	spty2d1 (ENSCSEG00000008208) #32	tmem86a (ENSCSEG00000008196) #33	IGSF22 (ENSCSEG00000008147)	B4GALNT4 (ENSCSEG00000008093) #37	ABTB2 (ENSCSEG00000008058)
Tongue sole	MODERN SPECIES	16	ENSCSEG00000009245	parp12a (ENSCSEG00000009223)	tbxas1 (ENSCSEG00000009189)	ENSCSEG00000009180	hipk2 (ENSCSEG00000009141)	ENSCSEG00000009086	mical3a (ENSCSEG00000009042)	ENSCSEG00000009030	ENSCSEG00000009012	kcnj11 (ENSCSEG00000009004) #17	mob2a (ENSCSEG00000008980) #18	dusp8a (ENSCSEG00000008955) #19	PTPN5 (ENSCSEG00000008920) #20	ENSCSEG00000008893 #21	OSBPL5 (ENSCSEG00000008867) #22	ENSCSEG00000008861 #22	phlda2 (ENSCSEG00000008851) #23	nap1l4a (ENSCSEG00000008814)	th (ENSCSEG00000008767) #25	igf2 (ENSCSEG00000008746) #26	mrpl23 (ENSCSEG00000008738) #27	ENSCSEG00000008380 #28	CPT1A (ENSCSEG00000008255) #29	ENSCSEG00000008239 #30	uevld (ENSCSEG00000008221)	spty2d1 (ENSCSEG00000008208) #32	tmem86a (ENSCSEG00000008196) #33	IGSF22 (ENSCSEG00000008147)	B4GALNT4 (ENSCSEG00000008093) #37	ABTB2 (ENSCSEG00000008058)	ENSCSEG00000008053
Tiger tail seahorse	MODERN SPECIES	438	ENSHCOG00000008247	fnbp4 (ENSHCOG00000008272) #7	agbl2 (ENSHCOG00000008296) #8	tmem17 (ENSHCOG00000008318) #9	SLC15A5 (ENSHCOG00000008335) #10	ENSHCOG00000000821 #11	hdhd5 (ENSHCOG00000008344) #13	ccdc77 (ENSHCOG00000008351) #14	ush1c (ENSHCOG00000008374) #16	abcc8 (ENSHCOG00000008416)	kcnj11 (ENSHCOG00000008432) #17	mob2a (ENSHCOG00000008442) #18	dusp8a (ENSHCOG00000008448) #19	PTPN5 (ENSHCOG00000008482) #20	ENSHCOG00000008507 #21	OSBPL5 (ENSHCOG00000008532) #22	phlda2 (ENSHCOG00000008547) #23	nap1l4a (ENSHCOG00000008558)	th (ENSHCOG00000009036) #25	igf2b (ENSHCOG00000009061) #26	mrpl23 (ENSHCOG00000009092) #27	ENSHCOG00000009124 #28	CPT1A (ENSHCOG00000009187) #29	ENSHCOG00000009226 #30	uevld (ENSHCOG00000009237)	spty2d1 (ENSHCOG00000009275) #32	tmem86a (ENSHCOG00000009289) #33	B4GALNT4 (ENSHCOG00000009344) #37	ABTB2 (ENSHCOG00000009387)	BRSK2 (ENSHCOG00000009433)	ldha (ENSHCOG00000009461)
Pinecone sodierfish	MODERN SPECIES	20	agbl2 (ENSMMDG00005007214) #8	tmem17 (ENSMMDG00005007212) #9	ENSMMDG00005007210	ENSMMDG00005007207	SLC15A5 (ENSMMDG00005007204) #10	ccdc34 (ENSMMDG00005007200) #11	RAB19 (ENSMMDG00005007113) #12	hdhd5 (ENSMMDG00005007106) #13	ccdc77 (ENSMMDG00005007103) #14	ush1c (ENSMMDG00005006881) #16	abcc8 (ENSMMDG00005006826)	kcnj11 (ENSMMDG00005006815) #17	mob2a (ENSMMDG00005006777) #18	dusp8a (ENSMMDG00005006766) #19	PTPN5 (ENSMMDG00005006753) #20	OSBPL5 (ENSMMDG00005005614) #22	phlda2 (ENSMMDG00005005596) #23	nap1l4a (ENSMMDG00005005591)	th (ENSMMDG00005005585) #25	igf2b (ENSMMDG00005005581) #26	mrpl23 (ENSMMDG00005005579) #27	ENSMMDG00005005575 #28	CPT1A (ENSMMDG00005004966) #29	ENSMMDG00005004896 #30	ENSMMDG00005004883 #31	spty2d1 (ENSMMDG00005004880) #32	tmem86a (ENSMMDG00005004878) #33	IGSF22 (ENSMMDG00005004875)	B4GALNT4 (ENSMMDG00005004587) #37	ABTB2 (ENSMMDG00005004302)	BRSK2 (ENSMMDG00005004205)
Cod	MODERN SPECIES	22	miox (ENSGMOG00000002527)	lmf2a (ENSGMOG00000002553)	c2cd5 (ENSGMOG00000002597)	ENSGMOG00000002666 ##37	ddx11 (ENSGMOG00000002748)	fkbp4 (ENSGMOG00000002725)	wash1 (ENSGMOG00000002801)	ENSGMOG00000002825	ENSGMOG00000004846 #14	ush1c (ENSGMOG00000004877) #16	abcc8 (ENSGMOG00000004921)	kcnj11 (ENSGMOG00000020415) #17	mob2a (ENSGMOG00000004985) #18	dusp8a (ENSGMOG00000031325) #19	ENSGMOG00000034993 #21	ENSGMOG00000019182 #22	phlda2 (ENSGMOG00000018409) #23	ENSGMOG00000018431	ENSGMOG00000027370	ENSGMOG00000018448	ENSGMOG00000012266	ENSGMOG00000027030	ENSGMOG00000012264	ENSGMOG00000012254	ENSGMOG00000012261	ENSGMOG00000012250	ENSGMOG00000012244	ENSGMOG00000012239	chkb (ENSGMOG00000012235)	ENSGMOG00000026995	cpt1b (ENSGMOG00000012229) ##29
Protacanthopterygii	ANCESTRAL SPECIES	178		ENSGT00940000153903.a.b.a	ENSGT00940000153201	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b #37	ENSGT00390000007101.d.b #33	ENSGT00940000154133.A #32	ENSGT00940000153903.a.b.b	ENSGT00940000164122.b #31	ENSGT00940000161238.k #30	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715 #28	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159
Salmoninae	ANCESTRAL SPECIES	90	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.a.b.a	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b #37	ENSGT00390000007101.d.b #33	ENSGT00940000154133.A #32	ENSGT00940000153903.a.b.b	ENSGT00940000164122.b #31	ENSGT00940000161238.k #30	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715 #28	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.e.a	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j
Salmoninae_a	ANCESTRAL SPECIES	116	ENSGT00940000155480.c.a	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.b	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b #37	ENSGT00390000007101.d.b #33	ENSGT00940000154133.A #32	ENSGT00940000153903.a.b.b	ENSGT00940000161238.k #30	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715 #28	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.e.a	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j	ENSGT00990000203589.a.b.a.b.xb.b
Oncorhynchus	ANCESTRAL SPECIES	22	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.a.a	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b #37	ENSGT00390000007101.d.b #33	ENSGT00940000154133.A #32	ENSGT00940000153903.a.b.b	ENSGT00940000164122.b #31	ENSGT00940000161238.k #30	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715 #28	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.e.a	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j	ENSGT00990000203589.a.b.a.b.xb.b
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000068260	ENSOMYG00000069379	ENSOMYG00000008517	ENSOMYG00000011121	ENSOMYG00000011634 #37	tmem86a (ENSOMYG00000011794) #33	spty2d1 (ENSOMYG00000011804) #32	ENSOMYG00000011821 #31	ENSOMYG00000011835 #30	ENSOMYG00000050092	cpt1ab (ENSOMYG00000011953) #29	ENSOMYG00000012196 #28	igf2b (ENSOMYG00000012223) #26	ENSOMYG00000012249 #27	ENSOMYG00000071936	ENSOMYG00000012407 #22	ENSOMYG00000060413	ENSOMYG00000014741 #23	ENSOMYG00000059075	ENSOMYG00000055589	nap1l4a (ENSOMYG00000014754)	ENSOMYG00000056107	ENSOMYG00000014899	ENSOMYG00000016353	ENSOMYG00000016392	ENSOMYG00000016402 #25	ENSOMYG00000016836	ENSOMYG00000017766	ifitm5 (ENSOMYG00000017783)	ENSOMYG00000017808	syt12 (ENSOMYG00000017936)
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00940000155480.c.a	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.a.a	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b #37	ENSGT00390000007101.d.b #33	ENSGT00940000154133.A #32	ENSGT00940000153903.a.b.b	ENSGT00940000161238.k #30	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715 #28	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.e.a	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j	ENSGT00990000203589.a.b.a.b.xb.b
Coho salmon	MODERN SPECIES	14	ENSOKIG00005017142	BRSK2 (ENSOKIG00005015751)	ABTB2 (ENSOKIG00005015533)	ENSOKIG00005015519	B4GALNT4 (ENSOKIG00005015145) #37	tmem86a (ENSOKIG00005015121) #33	spty2d1 (ENSOKIG00005015109) #32	ENSOKIG00005015074 #31	ENSOKIG00005015052 #30	CPT1A (ENSOKIG00005014443) #29	ENSOKIG00005014372 #28	igf2b (ENSOKIG00005014364) #26	ENSOKIG00005014359	ENSOKIG00005014352	mrpl23 (ENSOKIG00005014340) #27	OSBPL5 (ENSOKIG00005012920) #22	phlda2 (ENSOKIG00005012848) #23	nap1l4a (ENSOKIG00005012832)	FCSK (ENSOKIG00005011774)	commd9 (ENSOKIG00005011610)	PRR5L (ENSOKIG00005011590)	th (ENSOKIG00005011268) #25	ptdss2 (ENSOKIG00005010805)	cdkn1ca (ENSOKIG00005010781)	ifitm5 (ENSOKIG00005010770)	ENSOKIG00005010757	cat (ENSOKIG00005010059)	syt12 (ENSOKIG00005010001)	PEAK1 (ENSOKIG00005009990)	hmg20a (ENSOKIG00005009951)	ENSOKIG00005009927
Chinook salmon	MODERN SPECIES	10	ENSOTSG00005020979	tsg101a (ENSOTSG00005020677)	ldha (ENSOTSG00005020538)	BRSK2 (ENSOTSG00005020135)	ABTB2 (ENSOTSG00005020084)	B4GALNT4 (ENSOTSG00005019872) #37	tmem86a (ENSOTSG00005019865) #33	spty2d1 (ENSOTSG00005019863) #32	uevld (ENSOTSG00005019862)	ENSOTSG00005019859 #30	CPT1A (ENSOTSG00005019296) #29	ENSOTSG00005019284 #28	igf2b (ENSOTSG00005019282) #26	ENSOTSG00005019280	mrpl23 (ENSOTSG00005027223) #27	OSBPL5 (ENSOTSG00005025174) #22	phlda2 (ENSOTSG00005025163) #23	nap1l4a (ENSOTSG00005025162)	FCSK (ENSOTSG00005024944)	commd9 (ENSOTSG00005024916)	PRR5L (ENSOTSG00005024914)	th (ENSOTSG00005024912) #25	ptdss2 (ENSOTSG00005024757)	cdkn1ca (ENSOTSG00005024751)	ifitm5 (ENSOTSG00005024748)	cat (ENSOTSG00005022068)	syt12 (ENSOTSG00005022047)	PEAK1 (ENSOTSG00005022046)	hmg20a (ENSOTSG00005022044)	ENSOTSG00005022043	ENSOTSG00005022040
Salmo	ANCESTRAL SPECIES	50	ENSGT00940000155480.c.a	ENSGT00940000163982	ENSGT00940000153903.a.b.a	ENSGT00940000153201.e.b	ENSGT00940000157462.C.c.b	ENSGT00940000157661.e.a	ENSGT01050000244857.A.a.b #37	ENSGT00390000007101.d.b #33	ENSGT00940000154133.A #32	ENSGT00940000153903.a.b.b	ENSGT00940000161238.k #30	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715 #28	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT00390000002251	ENSGT00390000006218	ENSGT00530000063981.b	ENSGT00950000182885.C.a #25	ENSGT00530000063576.A	ENSGT00940000162677.pc.a	ENSGT00950000182857.a.a.b.b	ENSGT00390000018100.y.a	ENSGT00940000158627.f	ENSGT00940000157591	ENSGT00940000158464	ENSGT00940000159186.j	ENSGT00990000203589.a.b.a.b.xb.b
Atlantic salmon	MODERN SPECIES	1	tsg101a (ENSSSAG00000093918)	ldha (ENSSSAG00000041413)	ENSSSAG00000041623	ENSSSAG00000110204	ENSSSAG00000047838	ENSSSAG00000049007 #37	tmem86a (ENSSSAG00000106050) #33	spty2d1 (ENSSSAG00000049082) #32	uevld (ENSSSAG00000049123)	ENSSSAG00000084303	ENSSSAG00000098753 #30	ENSSSAG00000050712 #29	ENSSSAG00000118027 #28	igf2b (ENSSSAG00000051052) #26	RM23 (ENSSSAG00000121390) #27	ENSSSAG00000051329 #22	phlda2 (ENSSSAG00000060970) #23	ENSSSAG00000098299	nap1l4a (ENSSSAG00000060978)	ENSSSAG00000061207	ENSSSAG00000064293	ENSSSAG00000082778	ENSSSAG00000064310 #25	ENSSSAG00000104931	CDN1C (ENSSSAG00000065938)	ptdss2 (ENSSSAG00000064402)	ifitm5 (ENSSSAG00000065943)	cat (ENSSSAG00000065955)	syt12 (ENSSSAG00000087971)	peak1 (ENSSSAG00000066109)	ENSSSAG00000119527
River trout	MODERN SPECIES	37	ldha (ENSSTUG00000041545)	ENSSTUG00000041704	BRSK2 (ENSSTUG00000041784)	ENSSTUG00000043237	ABTB2 (ENSSTUG00000043264)	B4GALNT4 (ENSSTUG00000043630) #37	tmem86a (ENSSTUG00000043770) #33	spty2d1 (ENSSTUG00000043779) #32	ENSSTUG00000043787 #31	ENSSTUG00000043913 #30	ENSSTUG00000043962 #29	ENSSTUG00000044477 #28	igf2b (ENSSTUG00000000831) #26	mrpl23 (ENSSTUG00000002282) #27	ENSSTUG00000002328	OSBPL5 (ENSSTUG00000002352) #22	phlda2 (ENSSTUG00000002583) #23	nap1l4a (ENSSTUG00000002587)	FCSK (ENSSTUG00000002683)	commd9 (ENSSTUG00000004662)	PRR5L (ENSSTUG00000004683)	th (ENSSTUG00000004702) #25	ptdss2 (ENSSTUG00000004901)	cdkn1ca (ENSSTUG00000006067)	ifitm5 (ENSSTUG00000006074)	cat (ENSSTUG00000006137)	syt12 (ENSSTUG00000007792)	PEAK1 (ENSSTUG00000007813)	hmg20a (ENSSTUG00000007832)	ENSSTUG00000007871	ENSSTUG00000007878
Huchen	MODERN SPECIES	194														mrpl23 (ENSHHUG00000024642) #27	ENSHHUG00000024649	OSBPL5 (ENSHHUG00000024656) #22	phlda2 (ENSHHUG00000024840) #23	nap1l4a (ENSHHUG00000024847)	FCSK (ENSHHUG00000024894)	commd9 (ENSHHUG00000025053)	PRR5L (ENSHHUG00000025062)	th (ENSHHUG00000025072) #25	ptdss2 (ENSHHUG00000025160)	cdkn1ca (ENSHHUG00000025187)	ifitm5 (ENSHHUG00000025197)	ENSHHUG00000025200
Northern pike	MODERN SPECIES	18	ENSELUG00000022682 #29	ENSELUG00000024922	ENSELUG00000022588 #30	ENSELUG00000022529 #31	ENSELUG00000027859	gsto1 (ENSELUG00000022497)	spty2d1 (ENSELUG00000022464) #32	tmem86a (ENSELUG00000022437) #33	B4GALNT4 (ENSELUG00000019193) #37	ENSELUG00000025977	ABTB2 (ENSELUG00000019086)	ENSELUG00000034031 #28	igf2b (ENSELUG00000029387) #26	ENSELUG00000022230	mrpl23 (ENSELUG00000022256) #27	OSBPL5 (ENSELUG00000022285) #22	phlda2 (ENSELUG00000022294) #23	nap1l4a (ENSELUG00000022314)	tsg101a (ENSELUG00000022386)	ldha (ENSELUG00000022428)	BRSK2 (ENSELUG00000014751)	ENSELUG00000028459	ENSELUG00000014926	ENSELUG00000033596	MAGI2 (ENSELUG00000001736)	ENSELUG00000032975	ENSELUG00000024839	ENSELUG00000001735	ENSELUG00000028772	ENSELUG00000031792
Otomorpha	ANCESTRAL SPECIES	51	ENSGT01030000234588.b.b.b.b.a.b.a.h	ENSGT00940000177178	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.f #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715.b #28	ENSGT00390000007739 #27	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e #37	ENSGT00940000157661.e.a	ENSGT01060000248595.b.a.b.a.n.b ##29
Otophysi	ANCESTRAL SPECIES	85	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.f #19	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715.b #28	ENSGT00390000007739 #27	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k #30	ENSGT00940000153903.a.b.b	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k
Characiphysae	ANCESTRAL SPECIES	57	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.f #19	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715.b #28	ENSGT00390000007739 #27	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k
Channel catfish	MODERN SPECIES	5	tnni2a.3 (ENSIPUG00000004514)	tnni2 (ENSIPUG00000004539)	ENSIPUG00000004583	ENSIPUG00000004645	ENSIPUG00000004650	tnnt3a (ENSIPUG00000004658)	myod1 (ENSIPUG00000004693)	zgc:172145 (ENSIPUG00000004699)	ush1c (ENSIPUG00000004724) #16	abcc8 (ENSIPUG00000004801)	kcnj11 (ENSIPUG00000005009) #17	mob2a (ENSIPUG00000005022) #18	dusp8a (ENSIPUG00000005041) #19	ENSIPUG00000005070 #21	ENSIPUG00000005122 #21	OSBPL5 (ENSIPUG00000005152) #22	phlda2 (ENSIPUG00000005186) #23	nap1l4a (ENSIPUG00000005201)	cpt1a (ENSIPUG00000005228) #29	ENSIPUG00000005334	ENSIPUG00000005353 #28	mrpl23 (ENSIPUG00000005383) #27	igf2b (ENSIPUG00000005412) #26	th (ENSIPUG00000005463) #25	ENSIPUG00000005499 #30	uevld (ENSIPUG00000005569)	spty2d1 (ENSIPUG00000005617) #32	tmem86a (ENSIPUG00000005654) #33	IGSF22 (ENSIPUG00000005662)	B4GALNT4 (ENSIPUG00000005683) #37	abtb2 (ENSIPUG00000005727)
Characiphysae_b	ANCESTRAL SPECIES	32	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.f #19	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715.b #28	ENSGT00390000007739 #27	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k
Characoidei	ANCESTRAL SPECIES	68																ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715.b #28	ENSGT00390000007739 #27	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f	ENSGT01050000244857.A.a.b.e #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k
Mexicana tetra	MODERN SPECIES	780															ENSAMXG00000040242 #21	OSBPL5 (ENSAMXG00000016920) #22	phlda2 (ENSAMXG00000024859) #23	nap1l4a (ENSAMXG00000037540)	CPT1A (ENSAMXG00000016822) #29	ENSAMXG00000016782 #28	mrpl23 (ENSAMXG00000016759) #27
Red-bellied piranha	MODERN SPECIES	300												ENSPNAG00000010271	ENSPNAG00000010291	ENSPNAG00000010305	ENSPNAG00000010332 #21	OSBPL5 (ENSPNAG00000010345) #22	phlda2 (ENSPNAG00000010357) #23	nap1l4a (ENSPNAG00000010389)	CPT1A (ENSPNAG00000010520) #29	ENSPNAG00000010536 #28	mrpl23 (ENSPNAG00000010548) #27	igf2b (ENSPNAG00000010561) #26	th (ENSPNAG00000010605) #25	ENSPNAG00000010667 #30	uevld (ENSPNAG00000010689)	spty2d1 (ENSPNAG00000010715) #32	tmem86a (ENSPNAG00000010737) #33	IGSF22 (ENSPNAG00000001454)	B4GALNT4 (ENSPNAG00000010887) #37	ABTB2 (ENSPNAG00000010991)	BRSK2 (ENSPNAG00000011016)
Electric eel	MODERN SPECIES	236	SYT8 (ENSEEEG00000007387)	ENSEEEG00000007390	tnni2a.1 (ENSEEEG00000007391)	tnni2a.2 (ENSEEEG00000007393)	tnni2a.3 (ENSEEEG00000007394)	tnni2a.4 (ENSEEEG00000007412)	ENSEEEG00000007427	tnnt3a (ENSEEEG00000007429)	myod1 (ENSEEEG00000007431)	ush1c (ENSEEEG00000007432) #16	abcc8 (ENSEEEG00000007434)	kcnj11 (ENSEEEG00000007443) #17	mob2a (ENSEEEG00000007448) #18	dusp8a (ENSEEEG00000007456) #19	ENSEEEG00000007463 #21	OSBPL5 (ENSEEEG00000007471) #22	phlda2 (ENSEEEG00000007614) #23	nap1l4a (ENSEEEG00000007616)	ENSEEEG00000007618
Cyprinoidei	ANCESTRAL SPECIES	93	ENSGT01030000234858	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.a.a	ENSGT00920000149457	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a.n #18	ENSGT00940000160004.f #19	ENSGT00940000159535 #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715.b #28	ENSGT00390000007739 #27	ENSGT00940000160745.d #26	ENSGT00950000182885.C.a #25	ENSGT00940000161238.k #30	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT01050000244857.A.a.b.e #37	ENSGT00940000157661.e.a	ENSGT00940000157462.C.c.a.k	ENSGT00940000153201
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	296	ENSGT00940000160892	ENSGT01030000234588.b.b.b.b.a.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT00940000153901.a.b.b.a	ENSGT00940000167812.c	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.a.a.a	ENSGT00920000149457.b	ENSGT00950000183002.A.d #16	ENSGT00940000156626.w.a	ENSGT00990000203615.a.a.a.b.e #17	ENSGT01050000244956.a.a.n.a #18	ENSGT00940000160004.f.b #19	ENSGT00940000156870.cb #21	ENSGT00940000159535.g #22	ENSGT00940000169159.b	ENSGT01060000248595.b.a.b.a.n.a.b #29	ENSGT00940000164715.b.a #28	ENSGT00390000007739.a.b #27	ENSGT00940000160745.d.b #26	ENSGT00950000182885.C.a.a #25	ENSGT00940000161238.k.b #30	ENSGT00940000153903.a.b.b.c.b	ENSGT00940000154133.A.b #32	ENSGT00390000007101.d.b.f #33	ENSGT01050000244857.A.a.b.e.b #37	ENSGT00940000157661.e.a.a	ENSGT00940000157462.C.c.a.k.a	ENSGT00940000153201.b	ENSGT00940000153903.a.b.a.b.a
Cyprininae_a	ANCESTRAL SPECIES	16	ENSGT01030000234588.b.b.b.b.a.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b.b	ENSGT01030000234588.b.b.b.b.a.b.a.g.b	ENSGT00940000153901.a.b.b.b	ENSGT00940000153901.a.b.b.a	ENSGT00940000167812.c	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.a.a.a	ENSGT00920000149457.b	ENSGT00950000183002.A.d #16	ENSGT00940000156626.w.a	ENSGT00990000203615.a.a.a.b.e #17	ENSGT01050000244956.a.a.n.a #18	ENSGT00940000160004.f.b #19	ENSGT00940000156870.cb #21	ENSGT00940000159535.g #22	ENSGT00940000169159.b	ENSGT01060000248595.b.a.b.a.n.a.b #29	ENSGT00940000164715.b.a #28	ENSGT00390000007739.b #27	ENSGT00940000160745.d.b #26	ENSGT00950000182885.C.a.a #25	ENSGT00940000161238.k.b #30	ENSGT00940000153903.a.b.b.c.b	ENSGT00940000154133.A.b #32	ENSGT00390000007101.d.b.f #33	ENSGT01050000244857.A.a.b.e.b #37	ENSGT00940000157661.e.a.a	ENSGT00940000157462.C.c.a.k.a	ENSGT00940000153201.b	ENSGT00940000153903.a.b.a.b.a
Common carp reference	MODERN SPECIES	37	tnni2a.3 (ENSCCRG00000007849)	ENSCCRG00000007923	ENSCCRG00000007936	tnnt3a (ENSCCRG00000062720)	myod1 (ENSCCRG00000049312)	zgc:172145 (ENSCCRG00000059740)	ush1c (ENSCCRG00000013479) #16	abcc8 (ENSCCRG00000006460)	ENSCCRG00000078356	kcnj11 (ENSCCRG00000078656) #17	mob2a (ENSCCRG00000062835) #18	dusp8a (ENSCCRG00000066543) #19	ENSCCRG00000070357 #21	ENSCCRG00000066001 #21	ENSCCRG00000068830	ENSCCRG00000031128 #22	phlda2 (ENSCCRG00000059697) #23	nap1l4a (ENSCCRG00000031099)	ENSCCRG00000031052 #29	ENSCCRG00000031922 #28	ENSCCRG00000021606 #27	ENSCCRG00000082707	ENSCCRG00000069666	igf2b (ENSCCRG00000043613) #26	th (ENSCCRG00000072377) #25	ENSCCRG00000046641 #30	uevld (ENSCCRG00000046630)	spty2d1 (ENSCCRG00000046624) #32	tmem86a (ENSCCRG00000001012) #33	ENSCCRG00000013489 #37	ENSCCRG00000028735
Golden-line barbel	MODERN SPECIES	366	ENSSGRG00000039426	ENSSGRG00000039427	ENSSGRG00000039428	tnni2a.4 (ENSSGRG00000039431)	ENSSGRG00000039467	ENSSGRG00000039475	tnnt3a (ENSSGRG00000039479)	myod1 (ENSSGRG00000039484)	zgc:172145 (ENSSGRG00000039515)	ush1c (ENSSGRG00000039517) #16	abcc8 (ENSSGRG00000039570)	kcnj11 (ENSSGRG00000039775) #17	mob2a (ENSSGRG00000039776) #18	dusp8a (ENSSGRG00000039777) #19	ENSSGRG00000039787 #21	OSBPL5 (ENSSGRG00000039818) #22	phlda2 (ENSSGRG00000041036) #23	nap1l4a (ENSSGRG00000041037)
Goldfish	MODERN SPECIES	17	SYT8 (ENSCARG00000011614)	tnni2a.1 (ENSCARG00000011629)	ENSCARG00000011653	ENSCARG00000011667	tnnt3a (ENSCARG00000011669)	myod1 (ENSCARG00000011672)	zgc:172145 (ENSCARG00000011680)	ush1c (ENSCARG00000011715) #16	abcc8 (ENSCARG00000011954)	kcnj11 (ENSCARG00000012748) #17	mob2a (ENSCARG00000012767) #18	dusp8a (ENSCARG00000012784) #19	ENSCARG00000012795 #21	ENSCARG00000012810 #21	ENSCARG00000012825	OSBPL5 (ENSCARG00000012856) #22	phlda2 (ENSCARG00000013035) #23	nap1l4a (ENSCARG00000013043)	ENSCARG00000013069 #29	mrpl23 (ENSCARG00000013181) #27	ENSCARG00000013197 #28	igf2b (ENSCARG00000013203) #26	th (ENSCARG00000013219) #25	ENSCARG00000013357 #30	spty2d1 (ENSCARG00000013365) #32	tmem86a (ENSCARG00000013367) #33	B4GALNT4 (ENSCARG00000013389) #37	ABTB2 (ENSCARG00000013681)	BRSK2 (ENSCARG00000013704)	ENSCARG00000013859	ENSCARG00000013870
Cyprininae	ANCESTRAL SPECIES	219	ENSGT00390000017767.a.b	ENSGT01030000234858	ENSGT01030000234588.b.b.b.b.a.a.a.b	ENSGT01030000234588.b.b.b.b.a.a.b.a	ENSGT00940000153901.a.b.b.b	ENSGT00940000167812.d	ENSGT00940000158477.b	ENSGT00950000182959.b.a.a.b	ENSGT00920000149457.a	ENSGT00950000183002.A.c #16	ENSGT00940000156626.w.b	ENSGT00990000203615.a.a.a.b.f #17	ENSGT01050000244956.a.a.n.b #18	ENSGT00940000160004.f.a #19	ENSGT00940000156870.bb.b.a #21	ENSGT00940000159535.h #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159.a	ENSGT01060000248595.b.a.b.a.n.a.a #29	ENSGT00940000164715.b.b #28	ENSGT00390000007739.a.a #27	ENSGT00940000160745.d.a #26	ENSGT00950000182885.C.a.b #25	ENSGT00940000161238.k.a #30	ENSGT00940000153903.a.b.b.c.a	ENSGT00940000154133.A.a #32	ENSGT00390000007101.d.b.e #33	ENSGT01050000244857.A.a.b.e.a #37	ENSGT00940000157661.e.a.b	ENSGT00940000157462.C.c.a.k.b	ENSGT00940000153201.a
Cyprininae_a	ANCESTRAL SPECIES	154	ENSGT00950000182839.B.a.a.l.a	ENSGT00390000017767.a.b	ENSGT01030000234858	ENSGT01030000234588.b.b.b.b.a.a.a.b	ENSGT01030000234588.b.b.b.b.a.a.b.a	ENSGT00940000167812.d	ENSGT00940000158477.b	ENSGT00950000182959.b.a.a.b	ENSGT00920000149457.a	ENSGT00950000183002.A.c #16	ENSGT00940000156626.w.b	ENSGT00990000203615.a.a.a.b.f #17	ENSGT01050000244956.a.a.n.b #18	ENSGT00940000160004.f.a #19	ENSGT00940000156870.bb.b.a #21	ENSGT00940000159535.h #22	ENSGT00440000039564.a.b #23	ENSGT00940000169159.a	ENSGT01060000248595.b.a.b.a.n.a.a #29	ENSGT00940000164715.b.b #28	ENSGT00390000007739.a.a #27	ENSGT00940000160745.d.a #26	ENSGT00950000182885.C.a.b #25	ENSGT00940000161238.k.a #30	ENSGT00940000153903.a.b.b.c.a	ENSGT00940000154133.A.a #32	ENSGT00390000007101.d.b.e #33	ENSGT01050000244857.A.a.b.e.a #37	ENSGT00940000157661.e.a.b	ENSGT00940000157462.C.c.a.k.b	ENSGT00940000153201.a
Common carp reference	MODERN SPECIES	33	ENSCCRG00000049337	ENSCCRG00000059451	TNNT3 (ENSCCRG00000056652)	myod1 (ENSCCRG00000078915)	zgc:172145 (ENSCCRG00000074849)	ENSCCRG00000081027	ush1c (ENSCCRG00000014177) #16	abcc8 (ENSCCRG00000004760)	kcnj11 (ENSCCRG00000075210) #17	mob2a (ENSCCRG00000008336) #18	dusp8a (ENSCCRG00000056844) #19	ENSCCRG00000022539 #21	ENSCCRG00000075142	ENSCCRG00000070395 #21	ENSCCRG00000006126 #21	ENSCCRG00000050262 #22	phlda2 (ENSCCRG00000031114) #23	nap1l4a (ENSCCRG00000053707)	ENSCCRG00000076888	ENSCCRG00000031991 #29	ENSCCRG00000021778 #28	mrpl23 (ENSCCRG00000021780) #27	igf2b (ENSCCRG00000077650) #26	th (ENSCCRG00000028165) #25	ENSCCRG00000032449 #30	uevld (ENSCCRG00000032457)	spty2d1 (ENSCCRG00000032466) #32	tmem86a (ENSCCRG00000055822) #33	ENSCCRG00000028725 #37	ENSCCRG00000065686	ENSCCRG00000028788
Golden-line barbel	MODERN SPECIES	482											abcc8 (ENSSGRG00000019205)	MOB2 (ENSSGRG00000019221) #18	mob2a (ENSSGRG00000019222) #18	dusp8a (ENSSGRG00000019224) #19	ENSSGRG00000019231 #21	OSBPL5 (ENSSGRG00000019248) #22	phlda2 (ENSSGRG00000020334) #23	nap1l4a (ENSSGRG00000020335)	ENSSGRG00000020391 #29	ENSSGRG00000023673 #28	mrpl23 (ENSSGRG00000023674) #27	igf2b (ENSSGRG00000023677) #26	th (ENSSGRG00000023680) #25	ENSSGRG00000023688 #30	uevld (ENSSGRG00000023690)	spty2d1 (ENSSGRG00000023692) #32	tmem86a (ENSSGRG00000023693) #33
Goldfish	MODERN SPECIES	45	RASSF8 (ENSCARG00000047148)	ENSCARG00000047172	tnni2a.1 (ENSCARG00000047183)	tnni2a.2 (ENSCARG00000047218)	ENSCARG00000047242	tnni2a.3 (ENSCARG00000047250)	ENSCARG00000047262	myod1 (ENSCARG00000047275)	zgc:172145 (ENSCARG00000047288)	ush1c (ENSCARG00000047304) #16	abcc8 (ENSCARG00000047502)	kcnj11 (ENSCARG00000048580) #17	mob2a (ENSCARG00000048612) #18	dusp8a (ENSCARG00000048679) #19	ENSCARG00000048706	OSBPL5 (ENSCARG00000048773) #22	phlda2 (ENSCARG00000049767) #23	nap1l4a (ENSCARG00000049783)	ENSCARG00000049918 #29	ENSCARG00000050525 #28	mrpl23 (ENSCARG00000050540) #27	igf2b (ENSCARG00000050562) #26	th (ENSCARG00000050601) #25	ENSCARG00000050838 #30	uevld (ENSCARG00000050882)	spty2d1 (ENSCARG00000050914) #32	tmem86a (ENSCARG00000050925) #33	B4GALNT4 (ENSCARG00000050960) #37	ABTB2 (ENSCARG00000051344)	BRSK2 (ENSCARG00000051567)	ENSCARG00000053942
Zebrafish	MODERN SPECIES	17	hexa (ENSDARG00000052113)	nr2e3 (ENSDARG00000045904)	stoml1 (ENSDARG00000062142)	CYP11A1 (ENSDARG00000092696)	cyp11a1.1 (ENSDARG00000002347)	ENSDARG00000051858	stra6 (ENSDARG00000051874)	islr2 (ENSDARG00000051875)	ush1c (ENSDARG00000051876) #16	abcc8 (ENSDARG00000051879)	kcnj11 (ENSDARG00000051880) #17	mob2a (ENSDARG00000023214) #18	dusp8a (ENSDARG00000009299) #19	ENSDARG00000091539 #21	ENSDARG00000086511 #21	OSBPL5 (ENSDARG00000076002) #22	ENSDARG00000103841	ENSDARG00000116285	phlda2 (ENSDARG00000042874) #23	nap1l4a (ENSDARG00000070560)	ENSDARG00000062054 #29	ENSDARG00000062059 #28	zgc:123060 (ENSDARG00000095051)	mrpl23 (ENSDARG00000045696) #27	igf2b (ENSDARG00000033307) #26	th (ENSDARG00000030621) #25	ENSDARG00000051836 #30	uevld (ENSDARG00000009266)	ENSDARG00000094163	ENSDARG00000095586	spty2d1 (ENSDARG00000033889) #32
Clupeiformes	DUPLICATION
Clupeiformes	ANCESTRAL SPECIES	71	ENSGT00390000017767.a.b	ENSGT00940000160892	ENSGT01030000234858	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a.h	ENSGT01030000234588.b.b.b.b.a.b.a.g.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812	ENSGT00940000158477.a.b.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00950000183002.A.f #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b.d #17	ENSGT00940000159535.i #22	ENSGT00440000039564.a.b.i #23	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715.b #28	ENSGT00940000160745.d #26	ENSGT00390000007739 #27	ENSGT00950000183151.a.a.b.b	ENSGT00940000168336	ENSGT00530000063553.b.b	ENSGT00940000154837	ENSGT00940000158682	ENSGT00940000153212.y.a	ENSGT00940000159811	ENSGT00940000163703.b	ENSGT00940000158492	ENSGT00960000187150
Atlantic herring	MODERN SPECIES	19	fgf3 (ENSCHAG00000002250)	ANO1 (ENSCHAG00000002318)	shank2b (ENSCHAG00000004324)	endouc (ENSCHAG00000006479)	POLR3B (ENSCHAG00000006626)	rfx4 (ENSCHAG00000007091)	ric8b (ENSCHAG00000007520)	ENSCHAG00000007638	tmem263 (ENSCHAG00000007649)	si:ch73-62b13.1 (ENSCHAG00000007667)	mterf2 (ENSCHAG00000007688)	ENSCHAG00000007731	smpd3 (ENSCHAG00000007772)	ENSCHAG00000007790	zgc:77748 (ENSCHAG00000007808)	OSBPL5 (ENSCHAG00000007848) #22	phlda2 (ENSCHAG00000008832) #23	ENSCHAG00000008842 #24	CPT1A (ENSCHAG00000008928) #29	ENSCHAG00000010499 #28	igf2b (ENSCHAG00000010568) #26	mrpl23 (ENSCHAG00000010615) #27	sf3b3 (ENSCHAG00000010639)	il34 (ENSCHAG00000010849)	lonp2 (ENSCHAG00000010871)	siah1 (ENSCHAG00000011918)	n4bp1 (ENSCHAG00000011931)	nudt21 (ENSCHAG00000011942)	ENSCHAG00000012032	NUDT21 (ENSCHAG00000012056)	ENSCHAG00000012073
Denticle herring	MODERN SPECIES	8	tnni2a.2 (ENSDCDG00000031178)	ENSDCDG00000031179	ENSDCDG00000031186	TNNI2 (ENSDCDG00000005638)	tnni2a.4 (ENSDCDG00000005740)	ENSDCDG00000006819	ENSDCDG00000006877	MYOD1 (ENSDCDG00000006890)	zgc:172145 (ENSDCDG00000006912)	ush1c (ENSDCDG00000007075) #16	abcc8 (ENSDCDG00000007647)	kcnj11 (ENSDCDG00000007731) #17	mob2a (ENSDCDG00000007735) #18	dusp8a (ENSDCDG00000007781) #19	ENSDCDG00000007814 #21	OSBPL5 (ENSDCDG00000008088) #22	phlda2 (ENSDCDG00000013795) #23	ENSDCDG00000013798 #24	ENSDCDG00000013856 #29	ENSDCDG00000014858 #28	igf2b (ENSDCDG00000014862) #26	mrpl23 (ENSDCDG00000014864) #27	sf3b3 (ENSDCDG00000014868)	il34 (ENSDCDG00000014875)	ENSDCDG00000014877	siah1 (ENSDCDG00000014878)	n4bp1 (ENSDCDG00000014880)	ENSDCDG00000014881	ENSDCDG00000014883	ENSDCDG00000014908	ENSDCDG00000017098
Clupeiformes	ANCESTRAL SPECIES	449											ENSGT00990000203615.a.a.a.b.c #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004.f #19	ENSGT00940000159916 #20	ENSGT00940000156870 #21	ENSGT00940000159535.j #22	ENSGT00940000160333	ENSGT00440000039564.a.b.j #23	ENSGT00940000153362.b #24	ENSGT00390000006347.a
Atlantic herring	MODERN SPECIES	22	ENSCHAG00000004224	ENSCHAG00000004256	ENSCHAG00000004279	tnni2b.1 (ENSCHAG00000004290)	ENSCHAG00000004434	ENSCHAG00000004444	tnnt3b (ENSCHAG00000004458)	MYOD1 (ENSCHAG00000004523)	OTOG (ENSCHAG00000004569)	ABCC8 (ENSCHAG00000005413)	KCNJ11 (ENSCHAG00000013212) #17	mob2b (ENSCHAG00000013224) #18	DUSP8 (ENSCHAG00000013334) #19	PTPN5 (ENSCHAG00000013347) #20	ENSCHAG00000013402 #21	OSBPL5 (ENSCHAG00000013553) #22	slc22a18 (ENSCHAG00000015000)	PHLDA2 (ENSCHAG00000015121) #23	PHLDA2 (ENSCHAG00000015146) #23	nap1l4b (ENSCHAG00000015163) #24	cars1 (ENSCHAG00000015312)	atpv0e2 (ENSCHAG00000017756)	MICAL2 (ENSCHAG00000017792)	dkk3a (ENSCHAG00000017988)	usp47 (ENSCHAG00000018034)	CLEC3A (ENSCHAG00000019083)	vat1l (ENSCHAG00000019123)	bola3 (ENSCHAG00000019149)	bco1 (ENSCHAG00000019168)	bco1l (ENSCHAG00000019516)	ENSCHAG00000019741
Denticle herring	MODERN SPECIES	7	pde8a (ENSDCDG00000029146)	ENSDCDG00000029124	FSD2 (ENSDCDG00000029121)	WHAMM (ENSDCDG00000029117)	HOMER2 (ENSDCDG00000029113)	RAMAC (ENSDCDG00000029111)	nap1l4b (ENSDCDG00000029103) #24	cars1 (ENSDCDG00000028076)	SBF2 (ENSDCDG00000022757)	adma (ENSDCDG00000022641)	ENSDCDG00000022640	ENSDCDG00000022639	mob2b (ENSDCDG00000031645) #18	DUSP8 (ENSDCDG00000031643) #19	PTPN5 (ENSDCDG00000031636) #20	OSBPL5 (ENSDCDG00000030457) #22	dhcr7 (ENSDCDG00000030426)	MMP15 (ENSDCDG00000030195)	ctr9 (ENSDCDG00000030144)	zgc:194679 (ENSDCDG00000030130)	ENSDCDG00000030128	ist1 (ENSDCDG00000030121)	ENSDCDG00000030117	dhodh (ENSDCDG00000030109)	ENSDCDG00000030108	sult5a1 (ENSDCDG00000030107)	SLC22A31 (ENSDCDG00000030106)	ANKRD11 (ENSDCDG00000030102)	SPG7 (ENSDCDG00000028904)	cdh15 (ENSDCDG00000028828)	ENSDCDG00000028819
Osteoglossiformes	ANCESTRAL SPECIES	63	ENSGT01030000234588.b.b.b.b.a.a.b	ENSGT01030000234588.b.b.b.b.a.b.a	ENSGT00940000153901.a.b.b	ENSGT00940000167812.a	ENSGT00940000158477.a.a	ENSGT00950000182959.b.b	ENSGT00920000149457	ENSGT00940000157490	ENSGT00950000183002.A #16	ENSGT00940000156626	ENSGT00990000203615.a.a.a.b #17	ENSGT01050000244956.a.a #18	ENSGT00940000160004 #19	ENSGT00940000159916.d #20	ENSGT00940000156870 #21	ENSGT00940000159535 #22	ENSGT00440000039564.a.b.a #23	ENSGT00940000153362.b #24	ENSGT00390000006347.a	ENSGT01060000248595.b.a.b.a.n.a #29	ENSGT00940000164715 #28	ENSGT00940000160745 #26	ENSGT00390000007739 #27	ENSGT00950000182885.C.a #25	ENSGT00940000161238.m #30	ENSGT00940000153903.a.b.b	ENSGT00940000155653.b.a	ENSGT00940000164122.b #31	ENSGT00940000154133.A #32	ENSGT00390000007101.d.b #33	ENSGT00940000160123.f
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	20	ENSSFOG00015000969	tnni2a.2 (ENSSFOG00015001029)	tnni2a.4 (ENSSFOG00015001189)	ENSSFOG00015001301	ENSSFOG00015001312	TNNT3 (ENSSFOG00015001321)	myod1 (ENSSFOG00015001375)	zgc:172145 (ENSSFOG00015001401)	OTOG (ENSSFOG00015025460)	ush1c (ENSSFOG00015001489) #16	abcc8 (ENSSFOG00015001504)	kcnj11 (ENSSFOG00015025143) #17	MOB2 (ENSSFOG00015001705) #18	dusp8a (ENSSFOG00015025183) #19	PTPN5 (ENSSFOG00015001826) #20	OSBPL5 (ENSSFOG00015002010) #22	phlda2 (ENSSFOG00015002113) #23	nap1l4b (ENSSFOG00015002142) #24	cars1 (ENSSFOG00015002202)	CPT1A (ENSSFOG00015002348) #29	ENSSFOG00015002434 #28	ENSSFOG00015031340 #26	mrpl23 (ENSSFOG00015024842) #27	th (ENSSFOG00015002530) #25	ENSSFOG00015002584 #30	ENSSFOG00015002603 #31	spty2d1 (ENSSFOG00015002655) #32	tmem86a (ENSSFOG00015002671) #33	IGSF22 (ENSSFOG00015002677)	B4GALNT4 (ENSSFOG00015002771) #37	ABTB2 (ENSSFOG00015002829)
Asian bonytongue	MODERN SPECIES	2	ENSSFOG00015011996	ric8a (ENSSFOG00015028913)	BET1L (ENSSFOG00015024284)	DRD4 (ENSSFOG00015011928)	CTSD (ENSSFOG00015011884)	ENSSFOG00015011872	ENSSFOG00015011834	tnnt3a (ENSSFOG00015011790)	myod1 (ENSSFOG00015029499)	ENSSFOG00015011750	ENSSFOG00015011743	MOB2 (ENSSFOG00015011693) #18	DUSP8 (ENSSFOG00015027508) #19	PTPN5 (ENSSFOG00015011591) #20	ENSSFOG00015011522 #21	OSBPL5 (ENSSFOG00015011457) #22	slc22a18 (ENSSFOG00015011420)	phlda2 (ENSSFOG00015011437) #23	NAP1L4 (ENSSFOG00015011392) #24	igf2b (ENSSFOG00015029596) #26	ENSSFOG00015011350 #30	B4GALNT4 (ENSSFOG00015011329) #37	ABTB2 (ENSSFOG00015011282)	BRSK2 (ENSSFOG00015011235)	ldha (ENSSFOG00015011210)	tsg101a (ENSSFOG00015011182)	ENSSFOG00015011157	rassf7b (ENSSFOG00015027069)	ENSSFOG00015026690	ENSSFOG00015025499	ldlrad3 (ENSSFOG00015026744)
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	38	TNNI2 (ENSPKIG00000002556)	ENSPKIG00000002535	ENSPKIG00000002526	ENSPKIG00000002481	TNNT3 (ENSPKIG00000002402)	MYOD1 (ENSPKIG00000002354)	zgc:172145 (ENSPKIG00000002339)	OTOG (ENSPKIG00000002227)	ush1c (ENSPKIG00000002131) #16	abcc8 (ENSPKIG00000002041)	kcnj11 (ENSPKIG00000001997) #17	MOB2 (ENSPKIG00000001948) #18	dusp8a (ENSPKIG00000001877) #19	PTPN5 (ENSPKIG00000001814) #20	ENSPKIG00000001750 #21	OSBPL5 (ENSPKIG00000001623) #22	phlda2 (ENSPKIG00000001555) #23	nap1l4b (ENSPKIG00000001515) #24	cars1 (ENSPKIG00000001391)	CPT1A (ENSPKIG00000001242) #29	ENSPKIG00000001158 #28	igf2b (ENSPKIG00000001127) #26	mrpl23 (ENSPKIG00000001102) #27	th (ENSPKIG00000001023) #25	ENSPKIG00000000893 #30	uevld (ENSPKIG00000000822)	ENSPKIG00000000785	tmem86a (ENSPKIG00000000765) #33	IGSF22 (ENSPKIG00000000742)	B4GALNT4 (ENSPKIG00000000683) #37	ABTB2 (ENSPKIG00000000611)
P. kingsleyae	MODERN SPECIES	12	PPP6R3 (ENSPKIG00000014718)	ric8a (ENSPKIG00000014659)	BET1L (ENSPKIG00000014630)	DRD4 (ENSPKIG00000014609)	ctsd (ENSPKIG00000014578)	ENSPKIG00000014558	ENSPKIG00000014539	ENSPKIG00000014525	tnnt3a (ENSPKIG00000014475)	MYOD1 (ENSPKIG00000014431)	MOB2 (ENSPKIG00000014366) #18	DUSP8 (ENSPKIG00000014327) #19	PTPN5 (ENSPKIG00000014280) #20	ENSPKIG00000014235 #21	ENSPKIG00000014210 #21	OSBPL5 (ENSPKIG00000014169) #22	slc22a18 (ENSPKIG00000014108)	phlda2 (ENSPKIG00000014074) #23	NAP1L4 (ENSPKIG00000013990) #24	ENSPKIG00000013936 #26	ENSPKIG00000013906 #30	B4GALNT4 (ENSPKIG00000013857) #37	ABTB2 (ENSPKIG00000013765)	BRSK2 (ENSPKIG00000013692)	ENSPKIG00000013662	ldha (ENSPKIG00000013627)	ENSPKIG00000013539	hrasb (ENSPKIG00000013507)	rassf7b (ENSPKIG00000013492)	ascl1b (ENSPKIG00000013472)	slc1a2a (ENSPKIG00000013432)
Spotted gar	MODERN SPECIES	666	pdhx (ENSLOCG00000001356)	ENSLOCG00000001378	slc1a2a (ENSLOCG00000001388)	PAMR1 (ENSLOCG00000001426)	FJX1 (ENSLOCG00000017317)	LDLRAD3 (ENSLOCG00000001462)	ENSLOCG00000001491	mrpl21 (ENSLOCG00000001501)	ighmbp2 (ENSLOCG00000001512)	syt12 (ENSLOCG00000001528)	ascl1b (ENSLOCG00000017318)	mob2a (ENSLOCG00000001539) #18	dusp8a (ENSLOCG00000001567) #19	PTPN5 (ENSLOCG00000001577) #20	ENSLOCG00000001607 #21	OSBPL5 (ENSLOCG00000001627) #22	slc22a18 (ENSLOCG00000001662)	phlda2 (ENSLOCG00000017319) #23	nap1l4b (ENSLOCG00000001679) #24	cars1 (ENSLOCG00000001712)	cpt1aa (ENSLOCG00000001740) #29	ENSLOCG00000001786 #28	igf2b (ENSLOCG00000001806) #26	mrpl23 (ENSLOCG00000001825) #27	th (ENSLOCG00000001834) #25	ENSLOCG00000001862 #30	uevld (ENSLOCG00000001881)	spty2d1 (ENSLOCG00000001901) #32	tmem86a (ENSLOCG00000001930) #33	IGSF22 (ENSLOCG00000001945)	B4GALNT4 (ENSLOCG00000001959) #37