Euteleosteomorpha ANCESTRAL SPECIES 45 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000178019 ENSGT00950000182979.a.b.b.b.b.i.b ENSGT00940000173220 Acanthomorphata ANCESTRAL SPECIES 23 ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00940000169563 ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Euacanthomorphacea ANCESTRAL SPECIES 6 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Percomorphaceae ANCESTRAL SPECIES 5 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a Ovalentaria ANCESTRAL SPECIES 13 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a Atherinomorphae ANCESTRAL SPECIES 10 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Cyprinodontiformes ANCESTRAL SPECIES 13 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Aplocheiloidei ANCESTRAL SPECIES 4 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 Turquoise killifish MODERN SPECIES 1621 ENSNFUG00015014525 #7 trrap (ENSNFUG00015014119) #8 ENSNFUG00015014009 #9 star (ENSNFUG00015014000) #10 FAM20C (ENSNFUG00015013979) #11 foxl3 (ENSNFUG00015013963) #12 TOM1L2 (ENSNFUG00015013922) #13 ATPAF2 (ENSNFUG00015013898) #14 GID4 (ENSNFUG00015013885) #15 noxo1b (ENSNFUG00015013882) #16 ENSNFUG00015013873 #17 neurl2 (ENSNFUG00015013863) #18 msrb1b (ENSNFUG00015013855) #19 HS3ST6 (ENSNFUG00015013850) #20 ENSNFUG00015013846 #21 MEIOB (ENSNFUG00015013831) #22 MLST8 (ENSNFUG00015013814) #23 bricd5 (ENSNFUG00015013804) #24 PGP (ENSNFUG00015013798) #25 ZDHHC4 (ENSNFUG00015013790) #26 grid2ipb (ENSNFUG00015013747) #27 arhgap17a (ENSNFUG00015013542) #28 lcmt1 (ENSNFUG00015013483) #29 ENSNFUG00015013475 #30 hbae5 (ENSNFUG00015013469) #31 ENSNFUG00015013463 #32 hbbe3 (ENSNFUG00015013458) #33 ENSNFUG00015013449 #34 ENSNFUG00015013445 #35 NUF2 (ENSNFUG00015013438) #36 ENSNFUG00015013409 #37 Mangrove rivulus MODERN SPECIES 43 ubald1b (ENSKMAG00000006734) foxj1b (ENSKMAG00000006749) ENSKMAG00000006783 msrb1b (ENSKMAG00000006858) #19 ENSKMAG00000006871 #20 ENSKMAG00000006905 #22 mlst8 (ENSKMAG00000007045) #23 bricd5 (ENSKMAG00000007081) #24 pgp (ENSKMAG00000007095) #25 zdhhc4 (ENSKMAG00000007116) #26 grid2ipb (ENSKMAG00000007141) #27 arhgap17a (ENSKMAG00000007197) #28 lcmt1 (ENSKMAG00000007248) #29 ENSKMAG00000007283 #30 hbae5 (ENSKMAG00000007296) #31 hbbe3 (ENSKMAG00000007361) #33 ENSKMAG00000007795 #32 hbae4 (ENSKMAG00000007808) neurl2 (ENSKMAG00000007821) #18 ENSKMAG00000007831 #17 noxo1b (ENSKMAG00000007848) #16 Cyprinodontoidei ANCESTRAL SPECIES 17 ENSGT00940000153560.b.b.a.g ENSGT00940000169563 ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a NAME_4 ANCESTRAL SPECIES 15 ENSGT00950000182859.B ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000156278.xb.a ENSGT00940000156278.xb.b Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 26 ENSCVAG00000022387 #22 ENSCVAG00000022379 #23 Sheepshead minnow MODERN SPECIES 21 ENSCVAG00000022507 #22 ENSCVAG00000022476 #23 Mummichog MODERN SPECIES 290 ENSFHEG00000016513 baiap2l1a (ENSFHEG00000016505) tmem130 (ENSFHEG00000016497) nptx2b (ENSFHEG00000016483) trrap (ENSFHEG00000016413) #8 FAM20C (ENSFHEG00000015955) #11 foxl3 (ENSFHEG00000015932) #12 tom1l2 (ENSFHEG00000015915) #13 atpaf2 (ENSFHEG00000015894) #14 GID4 (ENSFHEG00000015885) #15 noxo1b (ENSFHEG00000015879) #16 ENSFHEG00000015873 #17 neurl2 (ENSFHEG00000015838) #18 msrb1b (ENSFHEG00000015832) #19 ENSFHEG00000015821 #20 ENSFHEG00000000390 #22 mlst8 (ENSFHEG00000015660) #23 pgp (ENSFHEG00000015624) #25 zdhhc4 (ENSFHEG00000015598) #26 Poeciliinae ANCESTRAL SPECIES 10 ENSGT00730000110975 ENSGT00940000163663.B.b ENSGT00940000165873 ENSGT00390000004394 ENSGT00950000182979.a.b.b.b.b.i.b ENSGT00940000178019 ENSGT00390000008825.a ENSGT00940000164514.a ENSGT00940000154590 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000165638.a.b #30 ENSGT00940000156372 #29 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00510000047678.a.a.b #19 ENSGT00940000159689 #18 ENSGT00940000164352.a #17 ENSGT00940000158812.j.a #16 ENSGT00500000044930.e.a #15 ENSGT00390000009492 #14 ENSGT00940000156940.b #13 ENSGT00940000162800 #12 ENSGT00950000182951.A.a.a.c.b #11 Poecilia ANCESTRAL SPECIES 22 ENSGT00940000162720.a.b.a ENSGT00730000110975 ENSGT00940000163663.B.b.a ENSGT00940000165873 ENSGT00390000004394 ENSGT00950000182979.a.b.b.b.b.i.b ENSGT00940000178019 ENSGT00390000008825.a ENSGT00940000164514.a ENSGT00940000154590 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000165638.a.b #30 ENSGT00940000156372 #29 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000159689 #18 ENSGT00940000164352.a #17 ENSGT00940000158812.j.a #16 ENSGT00500000044930.e.a #15 ENSGT00390000009492 #14 ENSGT00940000156940.b #13 ENSGT00940000162800 #12 ENSGT00950000182951.A.a.a.c.b.d #11 ENSGT00390000017961.cb #8 NAME_6 ANCESTRAL SPECIES 451 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 Sailfin molly MODERN SPECIES 3472 ENSPLAG00000012923 #22 mlst8 (ENSPLAG00000012968) #23 Amazon molly MODERN SPECIES 1148 ENSPFOG00000014271 #22 mlst8 (ENSPFOG00000014244) #23 bricd5 (ENSPFOG00000014229) #24 pgp (ENSPFOG00000014219) #25 zdhhc4 (ENSPFOG00000014197) #26 ENSPFOG00000014120 #27 Guppy MODERN SPECIES 449 ENSPREG00000016592 ENSPREG00000016582 shisa9a (ENSPREG00000016559) ercc4 (ENSPREG00000016530) MRTFB (ENSPREG00000016477) ENSPREG00000016457 ubald1b (ENSPREG00000016448) foxj1b (ENSPREG00000016437) ENSPREG00000016408 hbae4 (ENSPREG00000016396) hbbe3 (ENSPREG00000016388) #33 hbae5 (ENSPREG00000015837) #31 ENSPREG00000015771 #30 lcmt1 (ENSPREG00000015745) #29 ENSPREG00000015733 #20 ENSPREG00000015701 #22 pgp (ENSPREG00000015686) #25 zdhhc4 (ENSPREG00000015676) #26 grid2ipb (ENSPREG00000015659) #27 ENSPREG00000015650 neurl2 (ENSPREG00000015640) #18 ENSPREG00000015592 #17 noxo1b (ENSPREG00000015576) #16 GID4 (ENSPREG00000015566) #15 atpaf2 (ENSPREG00000015550) #14 ENSPREG00000015538 #13 foxl3 (ENSPREG00000015529) #12 FAM20C (ENSPREG00000015492) #11 ENSPREG00000015471 #8 ENSPREG00000015451 #8 ENSPREG00000015438 Platyfish MODERN SPECIES 1 shisa9a (ENSXMAG00000012636) cpped1 (ENSXMAG00000012639) ercc4 (ENSXMAG00000007920) MRTFB (ENSXMAG00000010665) ENSXMAG00000021599 ubald1b (ENSXMAG00000011792) foxj1b (ENSXMAG00000021262) ENSXMAG00000026583 hbae4 (ENSXMAG00000017354) ENSXMAG00000022060 #32 hbbe3 (ENSXMAG00000029665) #33 hbae5 (ENSXMAG00000025900) #31 ENSXMAG00000026595 #30 lcmt1 (ENSXMAG00000017430) #29 ENSXMAG00000029541 #20 ENSXMAG00000011777 #22 mlst8 (ENSXMAG00000025970) #23 bricd5 (ENSXMAG00000024582) #24 pgp (ENSXMAG00000029375) #25 zdhhc4 (ENSXMAG00000027839) #26 grid2ipb (ENSXMAG00000011712) #27 arhgap17a (ENSXMAG00000000134) #28 msrb1b (ENSXMAG00000027955) #19 neurl2 (ENSXMAG00000000146) #18 ENSXMAG00000000148 #17 noxo1b (ENSXMAG00000029525) #16 GID4 (ENSXMAG00000000156) #15 atpaf2 (ENSXMAG00000000163) #14 ENSXMAG00000022873 #13 ENSXMAG00000023560 FAM20C (ENSXMAG00000015864) #11 Oryzias ANCESTRAL SPECIES 11 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT01000000214725.F ENSGT00940000164514.a ENSGT00390000008825.a Oryzias_a ANCESTRAL SPECIES 32 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT01000000214725.F ENSGT00940000164514.a ENSGT00390000008825.a Japanese Medaka HdrR MODERN SPECIES 10 TECPR1 (ENSORLG00000003392) baiap2l1a (ENSORLG00000003355) tmem130 (ENSORLG00000003309) nptx2b (ENSORLG00000003306) trrap (ENSORLG00000003282) #8 FAM20C (ENSORLG00000003261) #11 foxl3 (ENSORLG00000003248) #12 tom1l2 (ENSORLG00000003244) #13 atpaf2 (ENSORLG00000003200) #14 GID4 (ENSORLG00000003188) #15 noxo1b (ENSORLG00000003181) #16 ENSORLG00000003163 #17 neurl2 (ENSORLG00000003138) #18 msrb1b (ENSORLG00000003128) #19 ENSORLG00000026027 #20 ENSORLG00000003120 #22 mlst8 (ENSORLG00000003112) #23 bricd5 (ENSORLG00000028325) #24 pgp (ENSORLG00000003089) #25 zdhhc4 (ENSORLG00000003085) #26 grid2ipb (ENSORLG00000030008) #27 arhgap17a (ENSORLG00000028308) #28 lcmt1 (ENSORLG00000003071) #29 ENSORLG00000003054 #30 ENSORLG00000003046 ENSORLG00000003020 #32 hbbe2 (ENSORLG00000026120) #33 hbae4 (ENSORLG00000002990) ENSORLG00000020174 ENSORLG00000002983 foxj1b (ENSORLG00000025879) Chinese medaka MODERN SPECIES 537 baiap2l1a (ENSOSIG00000019749) nptx2b (ENSOSIG00000019752) trrap (ENSOSIG00000003751) #8 ENSOSIG00000003809 FAM20C (ENSOSIG00000003895) #11 foxl3 (ENSOSIG00000005987) #12 tom1l2 (ENSOSIG00000005989) #13 atpaf2 (ENSOSIG00000006017) #14 ENSOSIG00000006035 GID4 (ENSOSIG00000006037) #15 noxo1b (ENSOSIG00000006040) #16 ENSOSIG00000006052 #17 neurl2 (ENSOSIG00000006218) #18 msrb1b (ENSOSIG00000006219) #19 ENSOSIG00000006221 #20 ENSOSIG00000006222 #22 bricd5 (ENSOSIG00000006224) #24 pgp (ENSOSIG00000006225) #25 zdhhc4 (ENSOSIG00000006226) #26 grid2ipb (ENSOSIG00000006227) #27 arhgap17a (ENSOSIG00000006251) #28 lcmt1 (ENSOSIG00000008647) #29 ENSOSIG00000008666 #30 hbae5 (ENSOSIG00000008669) #31 hbae4 (ENSOSIG00000008671) ENSOSIG00000008688 Oryzias_b ANCESTRAL SPECIES 9 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT01000000214725.E.b ENSGT01000000214725.E.a ENSGT01000000214725.F Indian medaka MODERN SPECIES 17 baiap2l1a (ENSOMEG00000006730) tmem130 (ENSOMEG00000006782) nptx2b (ENSOMEG00000006798) ENSOMEG00000006827 #8 ENSOMEG00000006842 #8 FAM20C (ENSOMEG00000006886) #11 foxl3 (ENSOMEG00000006898) #12 tom1l2 (ENSOMEG00000006987) #13 atpaf2 (ENSOMEG00000007022) #14 GID4 (ENSOMEG00000007074) #15 noxo1b (ENSOMEG00000007099) #16 ENSOMEG00000007160 #17 neurl2 (ENSOMEG00000007173) #18 msrb1b (ENSOMEG00000007188) #19 ENSOMEG00000007198 #20 ENSOMEG00000007227 #22 mlst8 (ENSOMEG00000007252) #23 bricd5 (ENSOMEG00000007262) #24 pgp (ENSOMEG00000007274) #25 zdhhc4 (ENSOMEG00000007290) #26 grid2ipb (ENSOMEG00000007318) #27 arhgap17a (ENSOMEG00000007398) #28 lcmt1 (ENSOMEG00000007468) #29 ENSOMEG00000007481 #30 hbae5 (ENSOMEG00000007493) #31 ENSOMEG00000007503 #32 hbbe3 (ENSOMEG00000007514) #33 hbae4 (ENSOMEG00000007528) ENSOMEG00000007563 ENSOMEG00000007614 ENSOMEG00000007626 Javanese ricefish MODERN SPECIES 10 bhlha15 (ENSOJAG00000003013) baiap2l1a (ENSOJAG00000002941) ENSOJAG00000002930 nptx2b (ENSOJAG00000002885) trrap (ENSOJAG00000002680) #8 FAM20C (ENSOJAG00000002606) #11 foxl3 (ENSOJAG00000002558) #12 tom1l2 (ENSOJAG00000002525) #13 atpaf2 (ENSOJAG00000002490) #14 GID4 (ENSOJAG00000002480) #15 noxo1b (ENSOJAG00000002457) #16 ENSOJAG00000002440 #17 neurl2 (ENSOJAG00000002429) #18 msrb1b (ENSOJAG00000002421) #19 ENSOJAG00000002413 #20 ENSOJAG00000002398 #22 mlst8 (ENSOJAG00000002374) #23 bricd5 (ENSOJAG00000002361) #24 pgp (ENSOJAG00000002356) #25 zdhhc4 (ENSOJAG00000002346) #26 grid2ipb (ENSOJAG00000002309) #27 arhgap17a (ENSOJAG00000002115) #28 lcmt1 (ENSOJAG00000009709) #29 ENSOJAG00000009660 #30 hbae5 (ENSOJAG00000009644) #31 hbbe3 (ENSOJAG00000009528) #33 hbae4 (ENSOJAG00000009500) ENSOJAG00000009322 ENSOJAG00000009299 ENSOJAG00000009262 ENSOJAG00000009245 Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a Pomacentridae ANCESTRAL SPECIES 87 ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Pomacentridae_A ANCESTRAL SPECIES 84 ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Amphiprion ANCESTRAL SPECIES 98 ENSGT00390000004394.h.a.b ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Clown anemonefish MODERN SPECIES 3347 FAM20C (ENSAOCG00000001342) #11 foxl3 (ENSAOCG00000018658) #12 tom1l2 (ENSAOCG00000018747) #13 atpaf2 (ENSAOCG00000018784) #14 GID4 (ENSAOCG00000018811) #15 noxo1b (ENSAOCG00000018883) #16 ENSAOCG00000018910 #17 neurl2 (ENSAOCG00000002156) #18 msrb1b (ENSAOCG00000018941) #19 ENSAOCG00000018956 #20 ENSAOCG00000018968 #22 mlst8 (ENSAOCG00000018989) #23 bricd5 (ENSAOCG00000019003) #24 pgp (ENSAOCG00000019012) #25 zdhhc4 (ENSAOCG00000019029) #26 grid2ipb (ENSAOCG00000019165) #27 Orange clownfish MODERN SPECIES 10 ENSAPEG00000001594 ercc4 (ENSAPEG00000001664) tmem130 (ENSAPEG00000001696) nptx2b (ENSAPEG00000001704) trrap (ENSAPEG00000001755) #8 FAM20C (ENSAPEG00000002057) #11 foxl3 (ENSAPEG00000002092) #12 tom1l2 (ENSAPEG00000002115) #13 atpaf2 (ENSAPEG00000002201) #14 GID4 (ENSAPEG00000002217) #15 noxo1b (ENSAPEG00000002260) #16 ENSAPEG00000002267 #17 neurl2 (ENSAPEG00000002281) #18 msrb1b (ENSAPEG00000002294) #19 ENSAPEG00000002308 #20 ENSAPEG00000002332 #22 mlst8 (ENSAPEG00000002462) #23 bricd5 (ENSAPEG00000002474) #24 pgp (ENSAPEG00000002519) #25 zdhhc4 (ENSAPEG00000002530) #26 grid2ipb (ENSAPEG00000002545) #27 arhgap17a (ENSAPEG00000002629) #28 lcmt1 (ENSAPEG00000002717) #29 aqp8a.1 (ENSAPEG00000002773) ENSAPEG00000002779 #30 hbae5 (ENSAPEG00000002815) #31 ENSAPEG00000002835 #32 hbbe3 (ENSAPEG00000002857) #33 hbae4 (ENSAPEG00000002862) ENSAPEG00000002884 foxj1b (ENSAPEG00000002988) Spiny chromis DUPLICATION Spiny chromis DUPLICATION Spiny chromis MODERN SPECIES 4140 ENSAPOG00000018615 #22 Spiny chromis MODERN SPECIES 4155 ENSAPOG00000018189 #22 Spiny chromis MODERN SPECIES 3417 ENSAPOG00000015088 #22 Bicolor damselfish MODERN SPECIES 2331 ENSSPAG00000012122 #20 ENSSPAG00000012004 #22 mlst8 (ENSSPAG00000011977) #23 bricd5 (ENSSPAG00000011956) #24 pgp (ENSSPAG00000011948) #25 Cichlidae ANCESTRAL SPECIES 15 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 7 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Lyretail cichlid MODERN SPECIES 366 nptx2b (ENSNBRG00000019969) ENSNBRG00000019950 #8 trrap (ENSNBRG00000019833) #8 FAM20C (ENSNBRG00000019780) #11 foxl3 (ENSNBRG00000019756) #12 tom1l2 (ENSNBRG00000019739) #13 atpaf2 (ENSNBRG00000019727) #14 GID4 (ENSNBRG00000019701) #15 noxo1b (ENSNBRG00000019679) #16 ENSNBRG00000019665 ENSNBRG00000019649 #17 ENSNBRG00000019634 #17 neurl2 (ENSNBRG00000019616) #18 msrb1b (ENSNBRG00000019586) #19 ENSNBRG00000019568 #20 MEIOB (ENSNBRG00000019512) #22 mlst8 (ENSNBRG00000019476) #23 bricd5 (ENSNBRG00000019452) #24 pgp (ENSNBRG00000019446) #25 zdhhc4 (ENSNBRG00000019414) #26 grid2ipb (ENSNBRG00000019207) #27 arhgap17a (ENSNBRG00000019089) #28 lcmt1 (ENSNBRG00000019069) #29 aqp8a.1 (ENSNBRG00000019049) ENSNBRG00000019034 #30 hbae5 (ENSNBRG00000018453) #31 hbbe3 (ENSNBRG00000017797) #33 hbae4 (ENSNBRG00000017717) ENSNBRG00000017678 foxj1b (ENSNBRG00000017654) ubald1b (ENSNBRG00000017644) Haplochromini ANCESTRAL SPECIES 22 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b.e #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Burton s mouthbrooder MODERN SPECIES 419 baiap2l1a (ENSHBUG00000021270) tmem130 (ENSHBUG00000021255) nptx2b (ENSHBUG00000000654) trrap (ENSHBUG00000021191) #8 FAM20C (ENSHBUG00000020764) #11 foxl3 (ENSHBUG00000020729) #12 tom1l2 (ENSHBUG00000020718) #13 ENSHBUG00000020696 #13 atpaf2 (ENSHBUG00000020685) #14 GID4 (ENSHBUG00000020660) #15 noxo1b (ENSHBUG00000020629) #16 ENSHBUG00000020613 #17 neurl2 (ENSHBUG00000020562) #18 msrb1b (ENSHBUG00000020545) #19 ENSHBUG00000020533 #20 MEIOB (ENSHBUG00000020520) #22 mlst8 (ENSHBUG00000020502) #23 bricd5 (ENSHBUG00000020511) #24 pgp (ENSHBUG00000020472) #25 Haplochromini_A ANCESTRAL SPECIES 24 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b.e #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a P. nyererei MODERN SPECIES 300 tmem130 (ENSPNYG00000020146) nptx2b (ENSPNYG00000020166) ENSPNYG00000020206 #8 trrap (ENSPNYG00000020241) #8 FAM20C (ENSPNYG00000020386) #11 foxl3 (ENSPNYG00000020423) #12 tom1l2 (ENSPNYG00000020437) #13 atpaf2 (ENSPNYG00000020483) #14 GID4 (ENSPNYG00000020490) #15 noxo1b (ENSPNYG00000020514) #16 ENSPNYG00000020570 ENSPNYG00000020648 #17 neurl2 (ENSPNYG00000020672) #18 msrb1b (ENSPNYG00000020707) #19 ENSPNYG00000020719 #20 MEIOB (ENSPNYG00000020742) #22 ENSPNYG00000020789 mlst8 (ENSPNYG00000020816) #23 bricd5 (ENSPNYG00000020843) #24 pgp (ENSPNYG00000020863) #25 zdhhc4 (ENSPNYG00000020867) #26 grid2ipb (ENSPNYG00000020897) #27 arhgap17a (ENSPNYG00000021046) #28 lcmt1 (ENSPNYG00000021096) #29 aqp8a.1 (ENSPNYG00000021135) ENSPNYG00000021166 #30 ENSPNYG00000021270 #32 hbae5 (ENSPNYG00000000664) #31 hbbe3 (ENSPNYG00000001507) #33 hbae4 (ENSPNYG00000002413) ENSPNYG00000002490 Haplochromini_B ANCESTRAL SPECIES 24 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b.e #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Eastern happy MODERN SPECIES 20 baiap2l1a (ENSACLG00000015328) tmem130 (ENSACLG00000015380) nptx2b (ENSACLG00000015439) ENSACLG00000015473 #8 trrap (ENSACLG00000015555) #8 FAM20C (ENSACLG00000015693) #11 foxl3 (ENSACLG00000015751) #12 tom1l2 (ENSACLG00000015776) #13 atpaf2 (ENSACLG00000015835) #14 GID4 (ENSACLG00000015877) #15 noxo1b (ENSACLG00000015891) #16 ENSACLG00000015942 #17 neurl2 (ENSACLG00000016065) #18 msrb1b (ENSACLG00000016096) #19 ENSACLG00000016122 #20 MEIOB (ENSACLG00000016141) #22 ENSACLG00000016210 mlst8 (ENSACLG00000016240) #23 bricd5 (ENSACLG00000016293) #24 pgp (ENSACLG00000016307) #25 zdhhc4 (ENSACLG00000016320) #26 grid2ipb (ENSACLG00000016457) #27 arhgap17a (ENSACLG00000016601) #28 lcmt1 (ENSACLG00000016783) #29 aqp8a.1 (ENSACLG00000016855) ENSACLG00000016867 #30 hbae5 (ENSACLG00000016905) #31 ENSACLG00000016916 #32 hbbe3 (ENSACLG00000016926) #33 hbae4 (ENSACLG00000016935) ENSACLG00000016945 Zebra mbuna MODERN SPECIES 1111 TECPR1 (ENSMZEG00005008470) baiap2l1a (ENSMZEG00005008444) tmem130 (ENSMZEG00005008428) nptx2b (ENSMZEG00005008418) trrap (ENSMZEG00005008221) #8 FAM20C (ENSMZEG00005008144) #11 foxl3 (ENSMZEG00005008136) #12 tom1l2 (ENSMZEG00005008115) #13 atpaf2 (ENSMZEG00005008102) #14 GID4 (ENSMZEG00005008087) #15 noxo1b (ENSMZEG00005008076) #16 ENSMZEG00005008063 #17 neurl2 (ENSMZEG00005008051) #18 msrb1b (ENSMZEG00005008038) #19 ENSMZEG00005008033 #20 MEIOB (ENSMZEG00005007857) #22 ENSMZEG00005007832 mlst8 (ENSMZEG00005007814) #23 bricd5 (ENSMZEG00005007809) #24 pgp (ENSMZEG00005007806) #25 zdhhc4 (ENSMZEG00005007797) #26 grid2ipb (ENSMZEG00005007679) #27 arhgap17a (ENSMZEG00005007569) #28 lcmt1 (ENSMZEG00005007543) #29 aqp8a.1 (ENSMZEG00005007537) ENSMZEG00005007524 #30 hbae5 (ENSMZEG00005007518) #31 hbbe3 (ENSMZEG00005007502) #33 hbae4 (ENSMZEG00005007486) ENSMZEG00005007407 foxj1b (ENSMZEG00005007371) Nile tilapia MODERN SPECIES 20 baiap2l1a (ENSONIG00000019822) tmem130 (ENSONIG00000033434) nptx2b (ENSONIG00000019818) trrap (ENSONIG00000019810) #8 FAM20C (ENSONIG00000027421) #11 foxl3 (ENSONIG00000035394) #12 tom1l2 (ENSONIG00000019805) #13 atpaf2 (ENSONIG00000019804) #14 GID4 (ENSONIG00000019803) #15 noxo1b (ENSONIG00000019802) #16 ENSONIG00000028101 ENSONIG00000019800 #17 neurl2 (ENSONIG00000043135) #18 msrb1b (ENSONIG00000019798) #19 ENSONIG00000037628 #20 MEIOB (ENSONIG00000019795) #22 ENSONIG00000019794 mlst8 (ENSONIG00000019791) #23 bricd5 (ENSONIG00000035833) #24 pgp (ENSONIG00000019789) #25 zdhhc4 (ENSONIG00000019788) #26 grid2ipb (ENSONIG00000019786) #27 arhgap17a (ENSONIG00000019784) #28 lcmt1 (ENSONIG00000019782) #29 aqp8a.1 (ENSONIG00000019780) ENSONIG00000019779 #30 hbae5 (ENSONIG00000019777) #31 ENSONIG00000036578 #32 hbbe3 (ENSONIG00000034901) #33 hbae4 (ENSONIG00000039402) ENSONIG00000019770 Midas cichlid MODERN SPECIES 194 baiap2l1a (ENSACIG00000003033) tmem130 (ENSACIG00000003313) nptx2b (ENSACIG00000003351) ENSACIG00000003373 #8 trrap (ENSACIG00000003402) #8 FAM20C (ENSACIG00000003548) #11 foxl3 (ENSACIG00000003570) #12 tom1l2 (ENSACIG00000003576) #13 atpaf2 (ENSACIG00000003606) #14 GID4 (ENSACIG00000003629) #15 noxo1b (ENSACIG00000003643) #16 ENSACIG00000003666 #17 neurl2 (ENSACIG00000003721) #18 msrb1b (ENSACIG00000003729) #19 ENSACIG00000003745 #20 MEIOB (ENSACIG00000003755) #22 mlst8 (ENSACIG00000003877) #23 bricd5 (ENSACIG00000004089) #24 pgp (ENSACIG00000004116) #25 zdhhc4 (ENSACIG00000004139) #26 ENSACIG00000004163 grid2ipb (ENSACIG00000004177) #27 arhgap17a (ENSACIG00000004237) #28 lcmt1 (ENSACIG00000004341) #29 aqp8a.1 (ENSACIG00000004369) ENSACIG00000004405 #30 ENSACIG00000004571 hbae5 (ENSACIG00000004590) #31 hbbe3 (ENSACIG00000005236) #33 hbae4 (ENSACIG00000006089) ENSACIG00000006145 Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Carangaria ANCESTRAL SPECIES 13 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Carangaria_A ANCESTRAL SPECIES 5 ENSGT00940000153560.b.b.a.g ENSGT00940000169563 ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Seriola ANCESTRAL SPECIES 1 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00390000013973.A.a.c.b.a ENSGT00530000063702.b ENSGT00940000159920.b ENSGT00940000155698.B ENSGT00390000016895 ENSGT00730000111029.a ENSGT00940000166161 ENSGT00940000154322.B ENSGT00940000158269.f.a Greater amberjack MODERN SPECIES 27 TECPR1 (ENSSDUG00000005290) baiap2l1a (ENSSDUG00000005346) tmem130 (ENSSDUG00000005365) nptx2b (ENSSDUG00000005381) trrap (ENSSDUG00000005417) #8 FAM20C (ENSSDUG00000005600) #11 foxl3 (ENSSDUG00000005636) #12 tom1l2 (ENSSDUG00000005662) #13 atpaf2 (ENSSDUG00000005731) #14 GID4 (ENSSDUG00000005746) #15 noxo1b (ENSSDUG00000005765) #16 ENSSDUG00000005776 #17 neurl2 (ENSSDUG00000005789) #18 msrb1b (ENSSDUG00000005804) #19 ENSSDUG00000005812 #20 MEIOB (ENSSDUG00000005823) #22 MLST8 (ENSSDUG00000005876) #23 mlst8 (ENSSDUG00000005898) #23 bricd5 (ENSSDUG00000005922) #24 pgp (ENSSDUG00000005933) #25 zdhhc4 (ENSSDUG00000005941) #26 grid2ipb (ENSSDUG00000005989) #27 arhgap17a (ENSSDUG00000006161) #28 ENSSDUG00000006309 LMF1 (ENSSDUG00000006325) sox8a (ENSSDUG00000006370) ENSSDUG00000006389 cox19 (ENSSDUG00000006411) ENSSDUG00000006433 ENSSDUG00000006462 ENSSDUG00000006488 Yellowtail amberjack MODERN SPECIES 3181 TECPR1 (ENSSLDG00000004237) baiap2l1a (ENSSLDG00000004340) tmem130 (ENSSLDG00000004354) nptx2b (ENSSLDG00000004376) trrap (ENSSLDG00000004449) #8 FAM20C (ENSSLDG00000004757) #11 foxl3 (ENSSLDG00000004803) #12 tom1l2 (ENSSLDG00000004820) #13 atpaf2 (ENSSLDG00000004840) #14 GID4 (ENSSLDG00000004857) #15 noxo1b (ENSSLDG00000004881) #16 ENSSLDG00000004900 #17 neurl2 (ENSSLDG00000004925) #18 msrb1b (ENSSLDG00000004938) #19 ENSSLDG00000004959 #20 MEIOB (ENSSLDG00000004986) #22 mlst8 (ENSSLDG00000005116) #23 bricd5 (ENSSLDG00000005165) #24 pgp (ENSSLDG00000005212) #25 zdhhc4 (ENSSLDG00000005222) #26 grid2ipb (ENSSLDG00000005268) #27 Barramundi perch MODERN SPECIES 431 foxl3 (ENSLCAG00010028086) #12 tom1l2 (ENSLCAG00010028087) #13 atpaf2 (ENSLCAG00010028088) #14 GID4 (ENSLCAG00010028089) #15 noxo1b (ENSLCAG00010028090) #16 ENSLCAG00010028091 #17 neurl2 (ENSLCAG00010028092) #18 msrb1b (ENSLCAG00010028093) #19 ENSLCAG00010028094 #20 MEIOB (ENSLCAG00010028095) #22 mlst8 (ENSLCAG00010028096) #23 bricd5 (ENSLCAG00010028097) #24 pgp (ENSLCAG00010028098) #25 zdhhc4 (ENSLCAG00010028099) #26 grid2ipb (ENSLCAG00010028100) #27 arhgap17a (ENSLCAG00010028101) #28 lcmt1 (ENSLCAG00010028102) #29 aqp8a.1 (ENSLCAG00010028103) ENSLCAG00010028104 #30 hbae5 (ENSLCAG00010028105) #31 ENSLCAG00010028106 #32 hbbe3 (ENSLCAG00010028107) #33 hbae4 (ENSLCAG00010028108) ENSLCAG00010028115 foxj1b (ENSLCAG00010028118) Pleuronectoidei ANCESTRAL SPECIES 6 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000178476 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a Tongue sole MODERN SPECIES 18 ENSCSEG00000000756 ENSCSEG00000000789 ENSCSEG00000000823 ENSCSEG00000000829 #8 trrap (ENSCSEG00000000834) #8 FAM20C (ENSCSEG00000000865) #11 msrb1b (ENSCSEG00000000880) #19 neurl2 (ENSCSEG00000000886) #18 ENSCSEG00000000890 #17 noxo1b (ENSCSEG00000000896) #16 GID4 (ENSCSEG00000000898) #15 atpaf2 (ENSCSEG00000000905) #14 ENSCSEG00000000911 ##13 foxl3 (ENSCSEG00000000919) #12 ENSCSEG00000000921 #20 MEIOB (ENSCSEG00000000926) #22 mlst8 (ENSCSEG00000000934) #23 bricd5 (ENSCSEG00000000940) #24 pgp (ENSCSEG00000000945) #25 zdhhc4 (ENSCSEG00000000947) #26 grid2ipb (ENSCSEG00000000952) #27 ENSCSEG00000000964 #28 ENSCSEG00000000976 #33 lcmt1 (ENSCSEG00000000983) #29 aqp8a.1 (ENSCSEG00000000989) ENSCSEG00000000995 hbae5 (ENSCSEG00000001002) #31 ENSCSEG00000001010 #32 HBE1 (ENSCSEG00000001017) #33 ENSCSEG00000001190 ENSCSEG00000001193 #32 Turbot MODERN SPECIES 9 baiap2l1a (ENSSMAG00000009639) tmem130 (ENSSMAG00000009625) nptx2b (ENSSMAG00000009613) ENSSMAG00000009184 #8 ENSSMAG00000009135 #11 foxl3 (ENSSMAG00000009122) #12 ENSSMAG00000034961 tom1l2 (ENSSMAG00000009102) #13 atpaf2 (ENSSMAG00000009068) #14 GID4 (ENSSMAG00000009052) #15 noxo1b (ENSSMAG00000009040) #16 ENSSMAG00000009015 #17 neurl2 (ENSSMAG00000008992) #18 msrb1b (ENSSMAG00000008970) #19 ENSSMAG00000008954 #20 ENSSMAG00000008821 #22 mlst8 (ENSSMAG00000008770) #23 bricd5 (ENSSMAG00000008752) #24 pgp (ENSSMAG00000008748) #25 zdhhc4 (ENSSMAG00000008696) #26 ENSSMAG00000008695 #27 grid2ipb (ENSSMAG00000008656) #27 arhgap17a (ENSSMAG00000008554) #28 lcmt1 (ENSSMAG00000008498) #29 aqp8a.1 (ENSSMAG00000008477) ENSSMAG00000008469 #30 ENSSMAG00000008459 #32 hbae4 (ENSSMAG00000021725) hbae5 (ENSSMAG00000008444) #31 ENSSMAG00000008257 foxj1b (ENSSMAG00000008197) Anabantaria ANCESTRAL SPECIES 18 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00940000169563 ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a Zig-zag eel MODERN SPECIES 10 bhlha15 (ENSMAMG00000006657) ENSMAMG00000006599 baiap2l1a (ENSMAMG00000006582) ENSMAMG00000006561 nptx2b (ENSMAMG00000006501) trrap (ENSMAMG00000006314) #8 ENSMAMG00000006279 #11 tom1l2 (ENSMAMG00000006252) #13 atpaf2 (ENSMAMG00000006243) #14 GID4 (ENSMAMG00000006219) #15 noxo1b (ENSMAMG00000006204) #16 ENSMAMG00000006182 #17 neurl2 (ENSMAMG00000006166) #18 msrb1b (ENSMAMG00000025564) #19 ENSMAMG00000006153 #20 ENSMAMG00000006016 #22 mlst8 (ENSMAMG00000005999) #23 bricd5 (ENSMAMG00000005980) #24 pgp (ENSMAMG00000005976) #25 zdhhc4 (ENSMAMG00000005970) #26 ENSMAMG00000024761 grid2ipb (ENSMAMG00000005902) #27 arhgap17a (ENSMAMG00000005495) #28 lcmt1 (ENSMAMG00000026824) #29 aqp8a.1 (ENSMAMG00000005456) ENSMAMG00000004830 #30 hbae5 (ENSMAMG00000004812) #31 hbbe3 (ENSMAMG00000004796) #33 hbae4 (ENSMAMG00000004789) ENSMAMG00000004697 foxj1b (ENSMAMG00000025608) Anabantoidei ANCESTRAL SPECIES 10 ENSGT00940000161824 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00940000169563 ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a Siamese fighting fish MODERN SPECIES 9 pvalb3 (ENSBSLG00000022268) bhlha15 (ENSBSLG00000022326) TECPR1 (ENSBSLG00000022366) baiap2l1a (ENSBSLG00000022471) ENSBSLG00000022510 nptx2b (ENSBSLG00000022517) trrap (ENSBSLG00000022902) #8 ENSBSLG00000023346 #11 foxl3 (ENSBSLG00000023526) #12 tom1l2 (ENSBSLG00000023533) #13 atpaf2 (ENSBSLG00000023576) #14 GID4 (ENSBSLG00000023586) #15 noxo1b (ENSBSLG00000023596) #16 ENSBSLG00000023607 #17 ENSBSLG00000023656 #20 ENSBSLG00000023660 #22 mlst8 (ENSBSLG00000023673) #23 bricd5 (ENSBSLG00000023689) #24 pgp (ENSBSLG00000023691) #25 zdhhc4 (ENSBSLG00000023694) #26 arhgap17a (ENSBSLG00000015375) #28 lcmt1 (ENSBSLG00000016200) #29 aqp8a.1 (ENSBSLG00000016222) ENSBSLG00000016227 #30 hbae5 (ENSBSLG00000016230) #31 ENSBSLG00000016238 #32 hbbe3 (ENSBSLG00000016244) #33 hbae4 (ENSBSLG00000016248) ENSBSLG00000016795 foxj1b (ENSBSLG00000017710) ubald1b (ENSBSLG00000017716) Climbing perch MODERN SPECIES 10 ENSATEG00000012981 ENSATEG00000012871 baiap2l1a (ENSATEG00000012469) ENSATEG00000012428 nptx2b (ENSATEG00000012347) trrap (ENSATEG00000012056) #8 ENSATEG00000011990 #11 foxl3 (ENSATEG00000029901) #12 tom1l2 (ENSATEG00000011951) #13 atpaf2 (ENSATEG00000011939) #14 GID4 (ENSATEG00000011913) #15 noxo1b (ENSATEG00000011901) #16 ENSATEG00000011757 #17 neurl2 (ENSATEG00000011739) #18 ENSATEG00000011732 #20 ENSATEG00000011628 #22 mlst8 (ENSATEG00000011610) #23 bricd5 (ENSATEG00000011601) #24 pgp (ENSATEG00000011591) #25 zdhhc4 (ENSATEG00000011584) #26 grid2ipb (ENSATEG00000011535) #27 arhgap17a (ENSATEG00000011455) #28 lcmt1 (ENSATEG00000011385) #29 aqp8a.1 (ENSATEG00000011356) ENSATEG00000011157 #30 hbae5 (ENSATEG00000011075) #31 ENSATEG00000011059 #32 hbbe3 (ENSATEG00000009603) #33 hbae4 (ENSATEG00000009576) ENSATEG00000009442 ENSATEG00000009481 Eupercaria ANCESTRAL SPECIES 10 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a Tetraodontidae ANCESTRAL SPECIES ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00940000169563 ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000154590 ENSGT00940000176976 #32 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000164514.a ENSGT00390000008825.a ENSGT00950000182979.a.b.b.b.b.i.b ENSGT00390000004394 ENSGT00940000165873 Fugu MODERN SPECIES bhlha15 (ENSTRUG00000016815) TECPR1 (ENSTRUG00000016816) baiap2l1a (ENSTRUG00000016828) ENSTRUG00000021481 nptx2b (ENSTRUG00000016838) trrap (ENSTRUG00000016842) #8 fam20c2 (ENSTRUG00000019489) #11 foxl3 (ENSTRUG00000025358) #12 tom1l2 (ENSTRUG00000016860) #13 atpaf2 (ENSTRUG00000016869) #14 GID4 (ENSTRUG00000016871) #15 noxo1b (ENSTRUG00000016872) #16 ENSTRUG00000016877 #17 neurl2 (ENSTRUG00000031963) #18 ENSTRUG00000016885 #20 MEIOB (ENSTRUG00000016886) #22 mlst8 (ENSTRUG00000016890) #23 pgp (ENSTRUG00000016899) #25 zdhhc4 (ENSTRUG00000016903) #26 grid2ipb (ENSTRUG00000016907) #27 lcmt1 (ENSTRUG00000016915) #29 arhgap17a (ENSTRUG00000016912) #28 hbae4 (ENSTRUG00000026211) ENSTRUG00000016923 #32 HBB (ENSTRUG00000028550) #33 hbae5 (ENSTRUG00000030273) #31 ENSTRUG00000016931 foxj1b (ENSTRUG00000016940) ubald1b (ENSTRUG00000030166) ENSTRUG00000026888 MRTFB (ENSTRUG00000016949) Tetraodon MODERN SPECIES 13 nptx2b (ENSTNIG00000012891) nptx2b (ENSTNIG00000012892) ENSTNIG00000012893 #8 ENSTNIG00000012894 #8 FAM20C (ENSTNIG00000012895) #11 FAM20C (ENSTNIG00000012896) #11 foxl3 (ENSTNIG00000012897) #12 tom1l2 (ENSTNIG00000012898) #13 atpaf2 (ENSTNIG00000012899) #14 GID4 (ENSTNIG00000012900) #15 noxo1b (ENSTNIG00000001622) #16 ENSTNIG00000012901 #17 neurl2 (ENSTNIG00000012902) #18 msrb1b (ENSTNIG00000012903) #19 ENSTNIG00000012904 #20 MEIOB (ENSTNIG00000012905) #22 mlst8 (ENSTNIG00000012906) #23 pgp (ENSTNIG00000012907) #25 zdhhc4 (ENSTNIG00000012908) #26 grid2ipb (ENSTNIG00000012909) #27 arhgap17a (ENSTNIG00000012910) #28 lcmt1 (ENSTNIG00000012911) #29 hbae4 (ENSTNIG00000012912) hbbe3 (ENSTNIG00000012913) #33 hbae5 (ENSTNIG00000012914) #31 ENSTNIG00000012915 foxj1b (ENSTNIG00000012916) ubald1b (ENSTNIG00000012917) MRTFB (ENSTNIG00000012918) ercc4 (ENSTNIG00000012919) ENSTNIG00000012920 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a Ballan wrasse MODERN SPECIES 181 FAM20C (ENSLBEG00000024102) #11 foxl3 (ENSLBEG00000024122) #12 tom1l2 (ENSLBEG00000024152) #13 atpaf2 (ENSLBEG00000024199) #14 GID4 (ENSLBEG00000024219) #15 noxo1b (ENSLBEG00000024271) #16 ENSLBEG00000024308 #17 neurl2 (ENSLBEG00000024323) #18 msrb1b (ENSLBEG00000024335) #19 ENSLBEG00000024346 #20 ENSLBEG00000024361 ENSLBEG00000024462 #22 mlst8 (ENSLBEG00000024545) #23 bricd5 (ENSLBEG00000024564) #24 pgp (ENSLBEG00000024578) #25 zdhhc4 (ENSLBEG00000024600) #26 grid2ipb (ENSLBEG00000024674) #27 arhgap17a (ENSLBEG00000024821) #28 lcmt1 (ENSLBEG00000024937) #29 aqp8a.1 (ENSLBEG00000024979) hbae5 (ENSLBEG00000024993) #31 ENSLBEG00000025004 #30 ENSLBEG00000025043 #32 HBE1 (ENSLBEG00000025066) #33 ENSLBEG00000025083 #33 ENSLBEG00000025095 #33 hbae4 (ENSLBEG00000025111) Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a ENSGT00950000182979.a.b.b.b.b.i.b Gilthead seabream MODERN SPECIES 12 TECPR1 (ENSSAUG00010013939) baiap2l1a (ENSSAUG00010013912) tmem130 (ENSSAUG00010013903) nptx2b (ENSSAUG00010013900) ENSSAUG00010013898 FAM20C (ENSSAUG00010013838) #11 foxl3 (ENSSAUG00010013827) #12 tom1l2 (ENSSAUG00010013794) #13 atpaf2 (ENSSAUG00010013780) #14 GID4 (ENSSAUG00010013779) #15 noxo1b (ENSSAUG00010013776) #16 ENSSAUG00010013774 #17 neurl2 (ENSSAUG00010013772) #18 msrb1b (ENSSAUG00010013771) #19 ENSSAUG00010013770 #20 MEIOB (ENSSAUG00010013768) #22 mlst8 (ENSSAUG00010013764) #23 bricd5 (ENSSAUG00010013762) #24 ENSSAUG00010013761 #25 zdhhc4 (ENSSAUG00010013760) #26 grid2ipb (ENSSAUG00010013741) #27 arhgap17a (ENSSAUG00010011620) #28 lcmt1 (ENSSAUG00010011445) #29 aqp8a.1 (ENSSAUG00010011442) ENSSAUG00010011438 #30 hbbe3 (ENSSAUG00010011429) #33 hbae5 (ENSSAUG00010011425) #31 hbae4 (ENSSAUG00010011422) ENSSAUG00010009359 foxj1b (ENSSAUG00010009334) ubald1b (ENSSAUG00010009333) Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a ENSGT00950000182979.a.b.b.b.b.i.b Large yellow croaker MODERN SPECIES 488 TECPR1 (ENSLCRG00005001959) baiap2l1a (ENSLCRG00005001998) tmem130 (ENSLCRG00005002204) nptx2b (ENSLCRG00005002206) trrap (ENSLCRG00005002229) #8 FAM20C (ENSLCRG00005002255) #11 foxl3 (ENSLCRG00005002336) #12 tom1l2 (ENSLCRG00005002339) #13 atpaf2 (ENSLCRG00005002369) #14 GID4 (ENSLCRG00005002379) #15 noxo1b (ENSLCRG00005002390) #16 ENSLCRG00005002401 #17 neurl2 (ENSLCRG00005002413) #18 msrb1b (ENSLCRG00005002422) #19 ENSLCRG00005002428 #20 ENSLCRG00005002439 #22 mlst8 (ENSLCRG00005002477) #23 bricd5 (ENSLCRG00005002500) #24 pgp (ENSLCRG00005002505) #25 zdhhc4 (ENSLCRG00005002509) #26 grid2ipb (ENSLCRG00005002531) #27 arhgap17a (ENSLCRG00005002600) #28 lcmt1 (ENSLCRG00005002871) #29 aqp8a.1 (ENSLCRG00005002919) ENSLCRG00005002920 #30 hbae5 (ENSLCRG00005002925) #31 hbbe3 (ENSLCRG00005002975) #33 hbae4 (ENSLCRG00005002977) ENSLCRG00005002993 foxj1b (ENSLCRG00005003066) ubald1b (ENSLCRG00005003069) European seabass MODERN SPECIES 11 bhlha15 (ENSDLAG00005033943) ENSDLAG00005020318 baiap2l1a (ENSDLAG00005020402) tmem130 (ENSDLAG00005020473) nptx2b (ENSDLAG00005020490) ENSDLAG00005020499 trrap (ENSDLAG00005004633) #8 ENSDLAG00005009626 #11 foxl3 (ENSDLAG00005009768) #12 TOM1L2 (ENSDLAG00005009785) #13 ENSDLAG00005034081 #15 noxo1b (ENSDLAG00005010019) #16 ENSDLAG00005010070 #17 neurl2 (ENSDLAG00005010208) #18 ENSDLAG00005033312 #20 ENSDLAG00005010234 #22 mlst8 (ENSDLAG00005010279) #23 pgp (ENSDLAG00005031158) #25 grid2ipb (ENSDLAG00005010428) #27 zdhhc4 (ENSDLAG00005010404) #26 arhgap17a (ENSDLAG00005010579) #28 lcmt1 (ENSDLAG00005011060) #29 aqp8a.1 (ENSDLAG00005011176) ENSDLAG00005011229 #30 hbae5 (ENSDLAG00005035008) #31 hbbe3 (ENSDLAG00005027857) #33 ENSDLAG00005011296 FOXJ1-A (ENSDLAG00005032925) FAM100A (ENSDLAG00005028739) MRTFB (ENSDLAG00005011925) ercc4 (ENSDLAG00005011989) Perciformes ANCESTRAL SPECIES 9 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00940000169563 ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a Cottioidei ANCESTRAL SPECIES 12 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00940000169563 ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000154590 ENSGT00940000164514.a ENSGT00390000008825.a ENSGT01100000263632.b ENSGT00950000182979.a.b.b.b.b.i.b ENSGT00390000004394 Stickleback MODERN SPECIES 5 pvalb3 (ENSGACG00000009409) ENSGACG00000009404 bhlha15 (ENSGACG00000009403) TECPR1 (ENSGACG00000009374) baiap2l1a (ENSGACG00000009367) nptx2b (ENSGACG00000009357) trrap (ENSGACG00000009311) #8 tom1l2 (ENSGACG00000009286) #13 atpaf2 (ENSGACG00000009266) #14 GID4 (ENSGACG00000009253) #15 noxo1b (ENSGACG00000009244) #16 ENSGACG00000009233 #16 ENSGACG00000009226 #17 neurl2 (ENSGACG00000009224) #18 msrb1b (ENSGACG00000009221) #19 MEIOB (ENSGACG00000009213) #22 mlst8 (ENSGACG00000009191) #23 pgp (ENSGACG00000009185) #25 zdhhc4 (ENSGACG00000009162) #26 grid2ipb (ENSGACG00000009152) #27 ENSGACG00000009145 #28 lcmt1 (ENSGACG00000009130) #29 ENSGACG00000009127 ##30 ENSGACG00000009123 ENSGACG00000009121 NLRC3 (ENSGACG00000009105) GCGR (ENSGACG00000009099) WDR90 (ENSGACG00000009083) rhot2 (ENSGACG00000009036) h1-0 (ENSGACG00000009033) rhbdl1 (ENSGACG00000009028) Lumpfish MODERN SPECIES 10 nptx2b (ENSCLMG00005011578) polm (ENSCLMG00005011576) trrap (ENSCLMG00005006184) #8 FAM20C (ENSCLMG00005005882) #11 foxl3 (ENSCLMG00005005868) #12 tom1l2 (ENSCLMG00005005867) #13 atpaf2 (ENSCLMG00005005866) #14 GID4 (ENSCLMG00005005865) #15 noxo1b (ENSCLMG00005005864) #16 ENSCLMG00005005863 #16 ENSCLMG00005005862 ENSCLMG00005005861 #17 neurl2 (ENSCLMG00005005859) #18 msrb1b (ENSCLMG00005005857) #19 ENSCLMG00005005856 #20 ENSCLMG00005005855 #22 mlst8 (ENSCLMG00005005854) #23 bricd5 (ENSCLMG00005005852) #24 pgp (ENSCLMG00005005850) #25 zdhhc4 (ENSCLMG00005005848) #26 grid2ipb (ENSCLMG00005005845) #27 arhgap17a (ENSCLMG00005004001) #28 lcmt1 (ENSCLMG00005003996) #29 ENSCLMG00005003994 #30 hbae5 (ENSCLMG00005003993) #31 hbae4 (ENSCLMG00005003992) ENSCLMG00005003865 foxj1b (ENSCLMG00005003851) ubald1b (ENSCLMG00005003850) ENSCLMG00005003847 MRTFB (ENSCLMG00005003652) Perciformes_a ANCESTRAL SPECIES 8 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00940000169563 ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 #8 ENSGT00950000182951.A.a.a.c.b #11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT01030000235046.a ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000159304 ENSGT00940000165638.a.b #30 ENSGT00940000163288.a.b.b.b.a.b #31 ENSGT00940000157809.j.a.e.b #33 ENSGT00940000176976 #32 ENSGT00940000154590 ENSGT00940000164514.a Channel bull blenny MODERN SPECIES 10 ENSCGOG00000010954 trrap (ENSCGOG00000007596) #8 FAM20C (ENSCGOG00000007375) #11 foxl3 (ENSCGOG00000007363) #12 ENSCGOG00000007360 tom1l2 (ENSCGOG00000007350) #13 atpaf2 (ENSCGOG00000007339) #14 GID4 (ENSCGOG00000007338) #15 noxo1b (ENSCGOG00000007331) #16 noxo1b (ENSCGOG00000007323) #16 noxo1b (ENSCGOG00000007318) #16 ENSCGOG00000007306 #17 neurl2 (ENSCGOG00000007303) #18 msrb1b (ENSCGOG00000007302) #19 ENSCGOG00000007300 #20 ENSCGOG00000007233 #22 mlst8 (ENSCGOG00000007209) #23 bricd5 (ENSCGOG00000007204) #24 pgp (ENSCGOG00000007202) #25 zdhhc4 (ENSCGOG00000007200) #26 ENSCGOG00000007182 grid2ipb (ENSCGOG00000007173) #27 ENSCGOG00000007170 #28 ENSCGOG00000007168 #28 lcmt1 (ENSCGOG00000006837) #29 arhgap17a (ENSCGOG00000006662) #28 lcmt1 (ENSCGOG00000006653) #29 lcmt1 (ENSCGOG00000006615) #29 aqp8a.1 (ENSCGOG00000006605) ENSCGOG00000006599 #30 hba1 (ENSCGOG00000006588) #31 Pike perch MODERN SPECIES 89 baiap2l1a (ENSSLUG00000012906) ENSSLUG00000012968 nptx2b (ENSSLUG00000012973) trrap (ENSSLUG00000013020) #8 FAM20C (ENSSLUG00000013169) #11 foxl3 (ENSSLUG00000013414) #12 tom1l2 (ENSSLUG00000013425) #13 atpaf2 (ENSSLUG00000013434) #14 GID4 (ENSSLUG00000013447) #15 noxo1b (ENSSLUG00000013460) #16 noxo1b (ENSSLUG00000013478) #16 ENSSLUG00000013492 #17 neurl2 (ENSSLUG00000013498) #18 msrb1b (ENSSLUG00000013503) #19 ENSSLUG00000013508 #20 MEIOB (ENSSLUG00000013516) #22 mlst8 (ENSSLUG00000013523) #23 bricd5 (ENSSLUG00000013533) #24 pgp (ENSSLUG00000013539) #25 zdhhc4 (ENSSLUG00000013564) #26 grid2ipb (ENSSLUG00000013568) #27 arhgap17a (ENSSLUG00000013625) #28 lcmt1 (ENSSLUG00000015712) #29 aqp8a.1 (ENSSLUG00000015716) ENSSLUG00000015724 #30 hbae5 (ENSSLUG00000015741) #31 hbbe3 (ENSSLUG00000015765) #33 hbae4 (ENSSLUG00000015769) ENSSLUG00000015811 foxj1b (ENSSLUG00000016253) ubald1b (ENSSLUG00000016256) Tiger tail seahorse MODERN SPECIES 82 mst1 (ENSHCOG00000002166) ENSHCOG00000002177 C3orf18 (ENSHCOG00000002182) gnb1b (ENSHCOG00000002212) tardbpb (ENSHCOG00000002224) ENSHCOG00000002233 foxl3 (ENSHCOG00000002243) #12 tom1l2 (ENSHCOG00000002262) #13 atpaf2 (ENSHCOG00000002277) #14 GID4 (ENSHCOG00000002297) #15 noxo1b (ENSHCOG00000002329) #16 ENSHCOG00000002349 #17 neurl2 (ENSHCOG00000002358) #18 msrb1b (ENSHCOG00000002366) #19 ENSHCOG00000002373 #20 ENSHCOG00000002399 #22 mlst8 (ENSHCOG00000000070) #23 bricd5 (ENSHCOG00000002412) #24 pgp (ENSHCOG00000002413) #25 zdhhc4 (ENSHCOG00000002425) #26 ENSHCOG00000002430 grid2ipb (ENSHCOG00000002453) #27 arhgap17a (ENSHCOG00000002506) #28 lcmt1 (ENSHCOG00000002538) #29 ENSHCOG00000002546 ENSHCOG00000002554 ENSHCOG00000002568 sox9a (ENSHCOG00000002578) ENSHCOG00000002604 ENSHCOG00000002612 VSTM4 (ENSHCOG00000002624) Pinecone sodierfish MODERN SPECIES 10 TECPR1 (ENSMMDG00005022524) baiap2l1a (ENSMMDG00005022553) ENSMMDG00005022561 nptx2b (ENSMMDG00005022564) trrap (ENSMMDG00005022580) #8 FAM20C (ENSMMDG00005022586) #11 foxl3 (ENSMMDG00005022587) #12 atpaf2 (ENSMMDG00005022589) #14 GID4 (ENSMMDG00005022590) #15 noxo1b (ENSMMDG00005022592) #16 ENSMMDG00005002458 ENSMMDG00005002472 #17 neurl2 (ENSMMDG00005002499) #18 msrb1b (ENSMMDG00005002502) #19 ENSMMDG00005002513 #20 MEIOB (ENSMMDG00005002539) #22 mlst8 (ENSMMDG00005002561) #23 bricd5 (ENSMMDG00005002595) #24 pgp (ENSMMDG00005002605) #25 zdhhc4 (ENSMMDG00005002617) #26 grid2ipb (ENSMMDG00005002642) #27 arhgap17a (ENSMMDG00005002772) #28 ENSMMDG00005003677 lcmt1 (ENSMMDG00005003689) #29 aqp8a.1 (ENSMMDG00005003894) ENSMMDG00005005224 #30 HBE1 (ENSMMDG00005005226) #33 HBE1 (ENSMMDG00005005229) #33 ENSMMDG00005005234 ##31 hbae4 (ENSMMDG00005005297) ENSMMDG00005005300 Cod MODERN SPECIES 9 ENSGMOG00000003909 baiap2l1a (ENSGMOG00000003872) tmem130 (ENSGMOG00000035103) nptx2b (ENSGMOG00000003855) trrap (ENSGMOG00000003716) #8 ENSGMOG00000015538 ##11 foxl3 (ENSGMOG00000024921) #12 tom1l2 (ENSGMOG00000005578) #13 atpaf2 (ENSGMOG00000005553) #14 GID4 (ENSGMOG00000005534) #15 noxo1b (ENSGMOG00000032993) #16 ENSGMOG00000023717 #17 ENSGMOG00000033069 msrb1b (ENSGMOG00000032780) #19 ENSGMOG00000027199 #20 ENSGMOG00000005404 #22 mlst8 (ENSGMOG00000005385) #23 bricd5 (ENSGMOG00000029047) #24 pgp (ENSGMOG00000024072) #25 zdhhc4 (ENSGMOG00000005351) #26 grid2ipb (ENSGMOG00000005318) #27 arhgap17a (ENSGMOG00000035125) #28 lcmt1 (ENSGMOG00000001230) #29 aqp8a.1 (ENSGMOG00000001220) ENSGMOG00000015825 #30 ENSGMOG00000022654 ENSGMOG00000029846 HbB4 (ENSGMOG00000026357) #33 hbae4 (ENSGMOG00000030505) HbB2 (ENSGMOG00000026934) #33 ENSGMOG00000035245 Protacanthopterygii ANCESTRAL SPECIES 4 ENSGT00510000047886.a.a ENSGT00940000153560.b.b.a.g ENSGT00950000183188.A.b ENSGT00940000169563 ENSGT00390000017961.db #8 ENSGT00950000182951.A.a.a.c.a.a ##11 ENSGT00940000162800 #12 ENSGT00940000156940.b #13 ENSGT00390000009492 #14 ENSGT00500000044930.e.a #15 ENSGT00940000158812.j.a #16 ENSGT00940000164352.a #17 ENSGT00940000159689 #18 ENSGT00510000047678.a.a.b #19 ENSGT00940000165237.b.b #20 ENSGT00390000001723 #22 ENSGT00390000014795 #23 ENSGT00930000150969.B #24 ENSGT00940000160577 #25 ENSGT00920000149163 #26 ENSGT00940000157625.a.b #27 ENSGT00940000156201.a.a #28 ENSGT00940000156372 #29 ENSGT00940000165638.b ##30 ENSGT00940000163474 ENSGT00940000178019 ENSGT00950000182979.a.b.b.b.b.i.b ENSGT00940000173220 ENSGT00390000004394 ENSGT00940000165873 ENSGT00940000163663.B.b Salmoninae ANCESTRAL SPECIES 147 ENSGT00940000164352.a.g #17 ENSGT00940000165237.b.b.d #20 ENSGT00390000001723 #22 ENSGT00940000160619.l.a.b ENSGT00390000014795 #23 ENSGT00930000150969.B.f #24 ENSGT00940000160577.a #25 ENSGT00920000149163.i #26 ENSGT00940000157625.a.b.f #27 ENSGT00940000156201.a.a.e #28 ENSGT00940000156372.s #29 ENSGT00940000165638.b.a.a ##30 ENSGT00940000157809.j.a.e.b.k #33 ENSGT01000000215398.b ENSGT00940000154590 ENSGT00940000164514.a.c.a ENSGT00390000008825.a.c.a.a ENSGT00940000163474 Salmoninae_a ANCESTRAL SPECIES 95 ENSGT00940000163144.a.b.d.b.b.b ENSGT00940000165760.a ENSGT00940000161824.f ENSGT00510000047886.a.a.c ENSGT00940000153560.b.b.a.g.h ENSGT00950000183188.A.b ENSGT00390000017961.eb #8 ENSGT00950000182951.A.a.a.c.a.a.b ##11 ENSGT00940000162800.f #12 ENSGT00940000156940.b.h #13 ENSGT00390000009492.f #14 ENSGT00500000044930.e.a.d #15 ENSGT00940000158812.j.a.p #16 ENSGT00940000164352.a.g #17 ENSGT00940000165237.b.b.d #20 ENSGT00390000001723 #22 ENSGT00940000160619.l.a.b ENSGT00390000014795 #23 ENSGT00930000150969.B.f #24 ENSGT00940000160577.a #25 ENSGT00920000149163.i #26 ENSGT00940000157625.a.b.f #27 ENSGT00940000156201.a.a.e #28 ENSGT00940000156372.s #29 ENSGT00940000165638.b.a.a ##30 ENSGT00940000159304.o.a ENSGT00940000165638.a.a.d ##30 ENSGT00940000163288.a.b.b.b.a.a.a.b.b ##31 ENSGT00940000157809.j.a.e.b.k #33 ENSGT01000000215398.b ENSGT00940000154590.e Salmo ANCESTRAL SPECIES 31 ENSGT00940000161824.f ENSGT00510000047886.a.a.c ENSGT00940000153560.b.b.a.g.h ENSGT00950000183188.A.b.a ENSGT00390000017961.eb #8 ENSGT01100000263907 ENSGT00950000182951.A.a.a.c.a.a.b ##11 ENSGT00940000162800.f #12 ENSGT00940000158431.a.a.a.a.b.a.c.a.c ENSGT00940000156940.b.h #13 ENSGT00390000009492.f #14 ENSGT00500000044930.e.a.d #15 ENSGT00940000158812.j.a.p #16 ENSGT00940000164352.a.g #17 ENSGT00940000165237.b.b.d #20 ENSGT00390000001723 #22 ENSGT00940000160619.l.a.b ENSGT00930000150969.B.e #24 ENSGT00390000014795 #23 ENSGT00930000150969.B.f #24 ENSGT00940000160577.a #25 ENSGT00920000149163.i #26 ENSGT00940000157625.a.b.f #27 ENSGT00940000156201.a.a.e #28 ENSGT00940000156372.s #29 ENSGT00940000165638.b.a.a ##30 ENSGT00940000165638.a.a.d ##30 ENSGT00940000163288.a.b.b.b.a.a.a.b.b ##31 ENSGT00940000157809.j.a.e.b.k #33 ENSGT01000000215398.b ENSGT00940000154590.e River trout MODERN SPECIES 9 TECPR1 (ENSSTUG00000003757) baiap2l1a (ENSSTUG00000003879) tmem130 (ENSSTUG00000003928) ENSSTUG00000004035 #8 ENSSTUG00000004072 ENSSTUG00000004096 ##11 foxl3 (ENSSTUG00000004429) #12 tom1l2 (ENSSTUG00000004445) #13 ENSSTUG00000004481 atpaf2 (ENSSTUG00000004490) #14 GID4 (ENSSTUG00000004553) #15 noxo1b (ENSSTUG00000004561) #16 ENSSTUG00000004582 ENSSTUG00000004596 #17 ENSSTUG00000004711 #20 MEIOB (ENSSTUG00000004716) #22 pgrmc1 (ENSSTUG00000004753) MLST8 (ENSSTUG00000004762) #23 bricd5 (ENSSTUG00000004776) #24 ENSSTUG00000004801 #23 ENSSTUG00000004811 #25 zdhhc4 (ENSSTUG00000004831) #26 grid2ipb (ENSSTUG00000004857) #27 ENSSTUG00000004895 arhgap17a (ENSSTUG00000004922) #28 lcmt1 (ENSSTUG00000005702) #29 ENSSTUG00000005708 ##30 ENSSTUG00000005718 #33 ENSSTUG00000005731 ENSSTUG00000005744 foxj1b (ENSSTUG00000005853) Atlantic salmon MODERN SPECIES tmem130 (ENSSSAG00000111828) tmem130 (ENSSSAG00000119219) ENSSSAG00000101241 #8 ENSSSAG00000000375 ENSSSAG00000106165 ENSSSAG00000000315 ##11 foxl3 (ENSSSAG00000111353) #12 ENSSSAG00000097777 tom1l2 (ENSSSAG00000000172) #13 atpaf2 (ENSSSAG00000000161) #14 cq039 (ENSSSAG00000000149) #15 noxo1b (ENSSSAG00000102274) #16 ENSSSAG00000000136 ENSSSAG00000000132 #17 ENSSSAG00000000122 #20 meiob (ENSSSAG00000005413) #22 ENSSSAG00000102775 bricd5 (ENSSSAG00000005398) #24 ENSSSAG00000005390 #25 ENSSSAG00000005384 grid2ipb (ENSSSAG00000005353) #27 ENSSSAG00000107128 arhgap17a (ENSSSAG00000005208) #28 ENSSSAG00000095092 ENSSSAG00000117726 #29 aqp8aa1 (ENSSSAG00000005186) ENSSSAG00000005171 ENSSSAG00000100077 #33 rhbl4 (ENSSSAG00000004938) foxj1b (ENSSSAG00000105536) ENSSSAG00000107705 Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00940000163144.a.b.d.a.a ENSGT00940000180063 ENSGT00940000161824.f ENSGT00510000047886.a.a.c ENSGT00940000153560.b.b.a.g.h ENSGT00950000183188.A.b ENSGT00390000017961.eb #8 ENSGT00950000182951.A.a.a.c.a.a.b ##11 ENSGT00940000162800.f #12 ENSGT00940000156940.b.h #13 ENSGT00390000009492.f #14 ENSGT00500000044930.e.a.d #15 ENSGT00940000158812.j.a.p #16 ENSGT00940000164352.a.g #17 ENSGT00940000165237.b.b.d #20 ENSGT00390000001723 #22 ENSGT00940000160619.l.a.b ENSGT01000000222128 ENSGT00940000157625.a.b.e #27 ENSGT00940000156201.a.a.f #28 ENSGT00940000156372.t #29 ENSGT00940000159304.o.b ENSGT00940000165638.b.a.b ##30 ENSGT01000000215398.a ENSGT00940000157809.j.a.e.b.l #33 ENSGT00940000154590.f ENSGT00940000156278.q ENSGT00940000164514.a.c.b ENSGT00390000008825.a.c.a.b ENSGT00950000182979.a.b.b.b.b.i.b.f ENSGT00940000165873.c Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00390000009492.f #14 ENSGT00500000044930.e.a.d #15 ENSGT00940000158812.j.a.p #16 ENSGT00940000158812.j.b.b ##16 ENSGT00940000157651.g.a ENSGT00530000063647.A.a ENSGT00940000153095.c.a ENSGT00390000006348 ENSGT00390000017606.a.b.h ENSGT00990000204633.a.a.a.b ENSGT00940000164352.b.r ##17 ENSGT00550000074902.o ENSGT00940000153432.A.a.o.b ENSGT00940000164352.a.g #17 ENSGT00940000165237.b.b.d #20 ENSGT00390000001723 #22 ENSGT00940000160619.l.a.b ENSGT00960000193203 ENSGT01000000222128 ENSGT00940000157625.a.b.e #27 ENSGT00940000156201.a.a.f #28 ENSGT00940000156372.t #29 ENSGT00940000165638.b.a.b ##30 ENSGT00940000157809.j.a.e.b.l #33 ENSGT01000000215398.a ENSGT00940000156278.q ENSGT00940000164514.a.c.b ENSGT00390000008825.a.c.a.b ENSGT00950000182979.a.b.b.b.b.i.b.f ENSGT00940000165873.c ENSGT00940000163663.B.b.c.a Coho salmon MODERN SPECIES 2 ENSOKIG00005006602 bhlha15 (ENSOKIG00005006636) TECPR1 (ENSOKIG00005006648) baiap2l1a (ENSOKIG00005006714) tmem130 (ENSOKIG00005006751) ENSOKIG00005006818 #8 FAM20C (ENSOKIG00005006904) ##11 foxl3 (ENSOKIG00005006948) #12 tom1l2 (ENSOKIG00005006959) #13 atpaf2 (ENSOKIG00005006994) #14 GID4 (ENSOKIG00005007022) #15 noxo1b (ENSOKIG00005007064) #16 ENSOKIG00005007116 ENSOKIG00005007133 #17 ENSOKIG00005007181 #20 MEIOB (ENSOKIG00005007198) #22 ENSOKIG00005007239 ENSOKIG00005007251 GRID2IP (ENSOKIG00005007267) #27 ENSOKIG00005007325 ENSOKIG00005007357 arhgap17a (ENSOKIG00005007461) #28 aqp8a.1 (ENSOKIG00005009284) ENSOKIG00005009297 ##30 ENSOKIG00005009321 #33 ENSOKIG00005009329 hbae4 (ENSOKIG00005009341) ENSOKIG00005009450 foxj1b (ENSOKIG00005010614) UBALD1 (ENSOKIG00005010620) ENSOKIG00005010626 Chinook salmon MODERN SPECIES ENSOTSG00005027318 ENSOTSG00005027316 ENSOTSG00005027314 ENSOTSG00005027302 SLC38A10 (ENSOTSG00005027299) ENSOTSG00005027297 ENSOTSG00005027296 ENSOTSG00005027294 ##11 foxl3 (ENSOTSG00005027291) #12 tom1l2 (ENSOTSG00005027288) #13 atpaf2 (ENSOTSG00005027287) #14 GID4 (ENSOTSG00005027286) #15 noxo1b (ENSOTSG00005027285) #16 ENSOTSG00005027284 ENSOTSG00005027283 #20 MEIOB (ENSOTSG00005027282) #22 pgrmc1 (ENSOTSG00005027281) ENSOTSG00005027280 zdhhc4 (ENSOTSG00005027279) #26 grid2ipb (ENSOTSG00005027268) #27 arhgap17a (ENSOTSG00005027248) #28 lcmt1 (ENSOTSG00005027246) #29 ENSOTSG00005027245 ##30 ENSOTSG00005027244 ENSOTSG00005027243 ENSOTSG00005027242 #33 ENSOTSG00005027241 foxj1b (ENSOTSG00005027238) UBALD1 (ENSOTSG00005027237) ENSOTSG00005027236 ENSOTSG00005027235 Rainbow trout MODERN SPECIES 15 ENSOMYG00000048027 ENSOMYG00000021890 baiap2l1a (ENSOMYG00000021863) tmem130 (ENSOMYG00000021837) ENSOMYG00000071117 ENSOMYG00000021793 ENSOMYG00000059008 ENSOMYG00000021785 ##11 ENSOMYG00000021779 tom1l2 (ENSOMYG00000021768) #13 atpaf2 (ENSOMYG00000021739) #14 GID4 (ENSOMYG00000021726) #15 noxo1b (ENSOMYG00000021685) #16 ENSOMYG00000072777 ENSOMYG00000021619 #20 ENSOMYG00000021591 #22 ENSOMYG00000021568 ENSOMYG00000021550 #25 ENSOMYG00000021543 #25 ENSOMYG00000056707 ENSOMYG00000021531 #27 ENSOMYG00000021512 #28 ENSOMYG00000049967 ENSOMYG00000070015 ##30 ENSOMYG00000021459 #33 hbae4 (ENSOMYG00000021449) ENSOMYG00000055147 ENSOMYG00000070166 ENSOMYG00000073651 ENSOMYG00000043102 ENSOMYG00000046025 Huchen MODERN SPECIES 2446 ENSHHUG00000048056 #17 ENSHHUG00000048058 #20 MEIOB (ENSHHUG00000048061) #22 pgrmc1 (ENSHHUG00000048065) mlst8 (ENSHHUG00000048068) #23 bricd5 (ENSHHUG00000048124) #24 pgp (ENSHHUG00000048125) #25 zdhhc4 (ENSHHUG00000048126) #26 grid2ipb (ENSHHUG00000048166) #27 Northern pike MODERN SPECIES 4 TECPR1 (ENSELUG00000018176) baiap2l1a (ENSELUG00000018225) tmem130 (ENSELUG00000018248) trrap (ENSELUG00000018399) #8 FAM20C (ENSELUG00000018434) ##11 foxl3 (ENSELUG00000030836) #12 tom1l2 (ENSELUG00000018476) #13 atpaf2 (ENSELUG00000001192) #14 GID4 (ENSELUG00000018541) #15 noxo1b (ENSELUG00000018551) #16 RNF151 (ENSELUG00000018574) ENSELUG00000018620 #17 neurl2 (ENSELUG00000018631) #18 msrb1b (ENSELUG00000018663) #19 ENSELUG00000018675 #20 MEIOB (ENSELUG00000018701) #22 mlst8 (ENSELUG00000000801) #23 bricd5 (ENSELUG00000025950) #24 pgp (ENSELUG00000018770) #25 zdhhc4 (ENSELUG00000018782) #26 grid2ipb (ENSELUG00000018823) #27 arhgap17a (ENSELUG00000018904) #28 aqp8a.1 (ENSELUG00000018983) hbae4 (ENSELUG00000019002) ENSELUG00000019035 foxj1b (ENSELUG00000019053) UBALD1 (ENSELUG00000032018) ENSELUG00000019069 MRTFB (ENSELUG00000019087) ercc4 (ENSELUG00000019115) cpped1 (ENSELUG00000019151)