Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT01040000240383.a.a.a.a.a ##20	ENSGT01050000244869.a.a.a.b.a.b.a.b	ENSGT01040000240383.b.a.a ##20	ENSGT01040000240383.b.b.b ##20	ENSGT01040000240383.b.b.a ##20	ENSGT01010000222320.a.a.a.b.j ##17	ENSGT01010000222320.a.a.b.b ##17	ENSGT01010000222320.a.a.a.b.i #10	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Glires	ANCESTRAL SPECIES	1	ENSGT01040000240383.a.a.a.a.a ##20	ENSGT01050000244869.a.a.a.b.a.b.a.b	ENSGT01040000240383.b.a.a ##20	ENSGT01040000240383.b.b.b ##20	ENSGT01040000240383.b.b.a ##20	ENSGT01010000222320.a.a.a.b.j ##17	ENSGT01010000222320.a.a.b.b ##17	ENSGT01010000222320.a.a.a.b.i.a.a ##17	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Rodentia	ANCESTRAL SPECIES	1	ENSGT01040000240383.a.a.a.b ##20	ENSGT01040000240383.a.a.a.a.a.a ##20	ENSGT01050000244869.a.a.a.b.a.b.a.b	ENSGT01040000240383.b.b.b ##20	ENSGT01040000240383.b.b.a ##20	ENSGT01010000222320.a.a.a.b.j ##17	ENSGT01010000222320.a.a.b.b ##17	ENSGT01010000222320.a.a.a.b.i.a.a ##17	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Rodentia_A	DUPLICATION
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT01050000244869.a.a.a.b.a.b.a.b	ENSGT01040000240383.b.a.a ##20	ENSGT01040000240383.b.b.b ##20	ENSGT01040000240383.b.b.a ##20	ENSGT01010000222320.a.a.b.b ##17	ENSGT01010000222320.a.a.a.b.i.a.b #10	ENSGT01010000222320.a.b.a.b #8	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.a.a.a.b.i #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374.j #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Hystricomorpha	ANCESTRAL SPECIES	58							ENSGT01010000222320.a.a.a.a.b.i.c ##17	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.g.b #17	ENSGT01040000240383.a.b #20	ENSGT01010000222320.a.a.b.a.d.a.h #16	ENSGT01010000222320.a.a.b.a.c #13	ENSGT00940000153972.B #21	ENSGT00390000013374.j #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Hystricomorpha_a	ANCESTRAL SPECIES	63							ENSGT01010000222320.a.a.a.a.b.i.c ##17	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.g.b #17	ENSGT01040000240383.a.b #20	ENSGT01010000222320.a.a.b.a.d.a.h #16	ENSGT01010000222320.a.a.b.a.c #13	ENSGT00940000153972.B #21	ENSGT00390000013374.j #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Hystricomorpha_b	ANCESTRAL SPECIES	77					ENSGT01010000222320.a.a.a.a.b.i.d #7	ENSGT01010000222320.a.b.a.b #8	ENSGT01010000222320.a.a.a.b.i.a.b.e.b ##17	ENSGT01010000222320.a.a.a.b.i.a.b.f.b #10	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.g.b #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374.j #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Long-tailed chinchilla	MODERN SPECIES	119	ENSCLAG00000017941 #7	ENSCLAG00000016111 #8	ENSCLAG00000018077 #9	ENSCLAG00000018010 #10	ENSCLAG00000015202 #11	OR8B4 (ENSCLAG00000017919) #12	OR8B8 (ENSCLAG00000014053) #13	ENSCLAG00000014221 #14	ENSCLAG00000014347 #15	ENSCLAG00000014966 #16	ENSCLAG00000017953 #17	ENSCLAG00000017999 #18	ENSCLAG00000015355 #19	ENSCLAG00000017942 #20	PANX3 (ENSCLAG00000015168) #21	TBRG1 (ENSCLAG00000015488) #22	SIAE (ENSCLAG00000015817) #23	SPA17 (ENSCLAG00000016272) #24	NRGN (ENSCLAG00000016686) #25	VSIG2 (ENSCLAG00000015241) #26	ESAM (ENSCLAG00000014355) #27	MSANTD2 (ENSCLAG00000015862) #28	ROBO3 (ENSCLAG00000016155) #29	ROBO4 (ENSCLAG00000016907) #30	HEPACAM (ENSCLAG00000015210) #31	CCDC15 (ENSCLAG00000015010) #32	SLC37A2 (ENSCLAG00000017318) #33	TMEM218 (ENSCLAG00000015737) #34	PKNOX2 (ENSCLAG00000014511) #35	FEZ1 (ENSCLAG00000013933) #36	ENSCLAG00000017926 #37
Degu	MODERN SPECIES	177									ENSODEG00000003164 ##17	OR8B8 (ENSODEG00000018970) #13	ENSODEG00000003391 ##17	ENSODEG00000003403	ENSODEG00000018915	OR8A1 (ENSODEG00000003500) #20	PANX3 (ENSODEG00000003519) #21	TBRG1 (ENSODEG00000004703) #22	SIAE (ENSODEG00000004746) #23	ENSODEG00000004880 #24	ENSODEG00000004900	ENSODEG00000004927	NRGN (ENSODEG00000004935) #25	VSIG2 (ENSODEG00000004967) #26	ESAM (ENSODEG00000004990) #27	MSANTD2 (ENSODEG00000005058) #28	ROBO3 (ENSODEG00000005149) #29	ROBO4 (ENSODEG00000005570) #30	HEPACAM (ENSODEG00000003222) #31	ENSODEG00000003315 #32	SLC37A2 (ENSODEG00000003464) #33	TMEM218 (ENSODEG00000003550) #34	ENSODEG00000018922
Guinea pig	MODERN SPECIES	19	ENSCPOG00000037638 ##17	ENSCPOG00000037342 #11	ENSCPOG00000023893 #7	ENSCPOG00000035854 #12	ENSCPOG00000040261 #12	ENSCPOG00000031198 ##17	ENSCPOG00000038771 #16	ENSCPOG00000033921 #15	ENSCPOG00000040370 #17	ENSCPOG00000039000 #20	ENSCPOG00000032461 #16	ENSCPOG00000034299 #20	ENSCPOG00000032068 #20	ENSCPOG00000031070 #20	PANX3 (ENSCPOG00000037635) #21	TBRG1 (ENSCPOG00000007887) #22	SIAE (ENSCPOG00000007892) #23	SPA17 (ENSCPOG00000007896) #24	NRGN (ENSCPOG00000039467) #25	VSIG2 (ENSCPOG00000000599) #26	ESAM (ENSCPOG00000000598) #27	MSANTD2 (ENSCPOG00000033419) #28	ROBO3 (ENSCPOG00000000081) #29	ROBO4 (ENSCPOG00000000082) #30	HEPACAM (ENSCPOG00000007623) #31	ENSCPOG00000037998 #32	SLC37A2 (ENSCPOG00000004719) #33	TMEM218 (ENSCPOG00000040775) #34	PKNOX2 (ENSCPOG00000034080) #35	FEZ1 (ENSCPOG00000003163) #36	EI24 (ENSCPOG00000007272)
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000046343 ##17	ENSHGLG00000035932 #11	OR8B4 (ENSHGLG00000020626) #12	OR8B8 (ENSHGLG00000032187) #13	ENSHGLG00000035763 ##17	ENSHGLG00000045199 #16	ENSHGLG00000021123	ENSHGLG00000044772 #15	ENSHGLG00000037119	ENSHGLG00000010377	ENSHGLG00000039043 #16	ENSHGLG00000035487 #16	ENSHGLG00000038186	OR8A1 (ENSHGLG00000020061) #20	PANX3 (ENSHGLG00000002705) #21	TBRG1 (ENSHGLG00000002891) #22	SPA17 (ENSHGLG00000003025) #24	SIAE (ENSHGLG00000002929) #23	ENSHGLG00000003057 #25	VSIG2 (ENSHGLG00000003169) #26	ESAM (ENSHGLG00000003339) #27	ENSHGLG00000036570 #27	MSANTD2 (ENSHGLG00000003431) #28	ENSHGLG00000003744 #29	ENSHGLG00000042522	ENSHGLG00000046842 #29	ROBO4 (ENSHGLG00000004050) #30	HEPACAM (ENSHGLG00000045085) #31	CCDC15 (ENSHGLG00000004674) #32	SLC37A2 (ENSHGLG00000005239) #33	TMEM218 (ENSHGLG00000033058) #34
Sciuridae	ANCESTRAL SPECIES	2	ENSGT01010000222320.a.a.b.b ##17	ENSGT01010000222320.a.a.a.b.i.a.b.h #10	ENSGT01010000222320.a.a.a.b.i.a.b.g #10	ENSGT01010000222320.a.a.a.a.a.k #11	ENSGT01010000222320.a.b.a.b.i.a.a #8	ENSGT01010000222320.a.a.a.a.a.l #11	ENSGT01010000222320.a.b.a.b.j.a #8	ENSGT01010000222320.a.b.a.b.i.b #8	ENSGT01010000222320.a.a.a.a.b.i #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374.j #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Marmotini	ANCESTRAL SPECIES	20	ENSGT01040000240383.b.b.a.o ##20	ENSGT01010000222320.a.a.b.b ##17	ENSGT01010000222320.a.a.a.b.i.a.b.h #10	ENSGT01010000222320.a.a.a.b.i.a.b.g #10	ENSGT01010000222320.a.b.a.b.j.b #8	ENSGT01010000222320.a.b.a.b.i.a.b #8	ENSGT01010000222320.a.b.a.b.i.a.a #8	ENSGT01010000222320.a.a.a.a.a.k #11	ENSGT01010000222320.a.a.a.a.b.i #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374.j #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT01070000255982	ENSGT00950000183375	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35
Marmotini_b	ANCESTRAL SPECIES	75			ENSGT01010000222320.a.b.a.b.j.b #8	ENSGT01010000222320.a.b.a.b.i.a.b #8	ENSGT01010000222320.a.b.a.b.i.a.a #8	ENSGT01010000222320.a.a.a.a.a.k #11	ENSGT01010000222320.a.a.a.a.b.i #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT00390000003710.c.a.a	ENSGT00940000157325.w.a	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374.j #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT01070000255982	ENSGT00950000183375	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35
Arctic ground squirrel	MODERN SPECIES	304			ENSUPAG00010023768 #8	ENSUPAG00010023770 #11	ENSUPAG00010023771 #8	OR8B4 (ENSUPAG00010023772) #12	OR8B8 (ENSUPAG00010023773) #13	ENSUPAG00010023775	ENSUPAG00010023777	ENSUPAG00010023778	ENSUPAG00010023779 ##17	OR8B12 (ENSUPAG00010023781) #17	ENSUPAG00010023782 #20	ENSUPAG00010023783 #20	PANX3 (ENSUPAG00010023787) #21	TBRG1 (ENSUPAG00010023789) #22	SIAE (ENSUPAG00010023791) #23	SPA17 (ENSUPAG00010023792) #24	NRGN (ENSUPAG00010023793) #25	VSIG2 (ENSUPAG00010023794) #26	ESAM (ENSUPAG00010023795) #27	MSANTD2 (ENSUPAG00010023796) #28	ROBO3 (ENSUPAG00010023799) #29	ROBO4 (ENSUPAG00010023803) #30	HEPACAM (ENSUPAG00010023805) #31	ENSUPAG00010023807 #32	ENSUPAG00010023809	ENSUPAG00010023815	SLC37A2 (ENSUPAG00010023818) #33	TMEM218 (ENSUPAG00010023820) #34	PKNOX2 (ENSUPAG00010023821) #35
Squirrel	MODERN SPECIES	343	ENSSTOG00000032561 #10	ENSSTOG00000033595 #11	ENSSTOG00000026482 #8	ENSSTOG00000023628 #8	ENSSTOG00000026535 #8	ENSSTOG00000030230 #11	ENSSTOG00000007876 #7	OR8B4 (ENSSTOG00000025786) #12	OR8B8 (ENSSTOG00000024328) #13	ENSSTOG00000031116	ENSSTOG00000033656	ENSSTOG00000019664 ##17	OR8B12 (ENSSTOG00000021180) #17	OR8A1 (ENSSTOG00000011739) #20	PANX3 (ENSSTOG00000010413) #21	TBRG1 (ENSSTOG00000010419) #22	SIAE (ENSSTOG00000010428) #23	SPA17 (ENSSTOG00000011065) #24	NRGN (ENSSTOG00000016276) #25	VSIG2 (ENSSTOG00000016277) #26	ESAM (ENSSTOG00000016279) #27	MSANTD2 (ENSSTOG00000016280) #28	ROBO3 (ENSSTOG00000016281) #29	ROBO4 (ENSSTOG00000016291) #30	HEPACAM (ENSSTOG00000016297) #31	SLC37A2 (ENSSTOG00000016304) #33	TMEM218 (ENSSTOG00000016309) #34	PKNOX2 (ENSSTOG00000004207) #35	FEZ1 (ENSSTOG00000004252) #36	EI24 (ENSSTOG00000004299)	ENSSTOG00000020526
Alpin marmot	MODERN SPECIES	16	MRPL15 (ENSMMMG00000001003)	LYPLA1 (ENSMMMG00000000994)	TCEA1 (ENSMMMG00000000970)	ATP6V1H (ENSMMMG00000000819)	OPRK1 (ENSMMMG00000000792)	ENSMMMG00000000769	ENSMMMG00000000761	NPBWR1 (ENSMMMG00000000755)	RB1CC1 (ENSMMMG00000000733)	ALKAL1 (ENSMMMG00000000712)	ST18 (ENSMMMG00000000496)	ENSMMMG00000000469	PCMTD1 (ENSMMMG00000000404)	PXDNL (ENSMMMG00000000367)	SNTG1 (ENSMMMG00000000104)	ENSMMMG00000000024 #22	ENSMMMG00000000012	SNAI2 (ENSMMMG00000022198)	CLXN (ENSMMMG00000022191)	ENSMMMG00000022170	ENSMMMG00000022167	ENSMMMG00000022157	ENSMMMG00000022151	ENSMMMG00000022149	UBE2V2 (ENSMMMG00000022141)	MCM4 (ENSMMMG00000022114)	PRKDC (ENSMMMG00000022087)	CEBPD (ENSMMMG00000022067)	ENSMMMG00000022065	SPIDR (ENSMMMG00000021918)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005014497 #10	ENSSVLG00005014517 #11	ENSSVLG00005014539 #8	ENSSVLG00005014578 #8	ENSSVLG00005014632 #8	ENSSVLG00005014679 #8	ENSSVLG00005014732 #11	ENSSVLG00005014776 #8	ENSSVLG00005014856 #8	OR8B8 (ENSSVLG00005014922) #13	ENSSVLG00005014945 ##17	ENSSVLG00005014960	OR8B12 (ENSSVLG00005015073) #17	OR8A1 (ENSSVLG00005015091) #20	PANX3 (ENSSVLG00005015110) #21	TBRG1 (ENSSVLG00005015166) #22	SIAE (ENSSVLG00005015262) #23	SPA17 (ENSSVLG00005015480) #24	NRGN (ENSSVLG00005015507) #25	VSIG2 (ENSSVLG00005015545) #26	ESAM (ENSSVLG00005015674) #27	MSANTD2 (ENSSVLG00005015771) #28	ENSSVLG00005015859	ENSSVLG00005015882 #29	ENSSVLG00005015942 #29	ROBO4 (ENSSVLG00005016212) #30	HEPACAM (ENSSVLG00005016550) #31	CCDC15 (ENSSVLG00005016619) #32	SLC37A2 (ENSSVLG00005016667) #33	TMEM218 (ENSSVLG00005017108) #34	PKNOX2 (ENSSVLG00005017211) #35
Rodentia_A	ANCESTRAL SPECIES	162															ENSGT00960000189455	ENSGT00390000013374.i ##22
Sciuridae	ANCESTRAL SPECIES	157															ENSGT00960000189455	ENSGT00390000013374.i ##22
Marmotini	ANCESTRAL SPECIES																	ENSGT00390000013374.i ##22
Alpin marmot	MODERN SPECIES	58	ENSMMMG00000020349 #8	ENSMMMG00000020351 #8	ENSMMMG00000020353 #8	ENSMMMG00000020354 #8	ENSMMMG00000020363 #8	ENSMMMG00000020370 #8	OR8B4 (ENSMMMG00000020374) #12	OR8B8 (ENSMMMG00000020376) #13	ENSMMMG00000020382	ENSMMMG00000020387	ENSMMMG00000020389 ##17	OR8B12 (ENSMMMG00000000108) #17	ENSMMMG00000000136 #20	ENSMMMG00000000144 #20	PANX3 (ENSMMMG00000000155) #21	ENSMMMG00000000174 ##22	SIAE (ENSMMMG00000000184) #23	SPA17 (ENSMMMG00000000199) #24	NRGN (ENSMMMG00000000222) #25	VSIG2 (ENSMMMG00000000235) #26	ESAM (ENSMMMG00000000281) #27	MSANTD2 (ENSMMMG00000000305) #28	ROBO3 (ENSMMMG00000000349) #29	ROBO4 (ENSMMMG00000000453) #30	HEPACAM (ENSMMMG00000000758) #31	ENSMMMG00000000786 #32	ENSMMMG00000000800	ENSMMMG00000000816	SLC37A2 (ENSMMMG00000000851) #33	TMEM218 (ENSMMMG00000000921) #34	PKNOX2 (ENSMMMG00000000940) #35
Eurasian red squirrel	MODERN SPECIES	11	AKAP6 (ENSSVLG00005003395)	NPAS3 (ENSSVLG00005003199)	EGLN3 (ENSSVLG00005003108)	ENSSVLG00005003092	ENSSVLG00005003086	ENSSVLG00005003068	ENSSVLG00005003053	ENSSVLG00005003042	ENSSVLG00005003024	ENSSVLG00005002935	ENSSVLG00005002890	BAZ1A (ENSSVLG00005002845)	ENSSVLG00005002806	SRP54 (ENSSVLG00005002707)	ENSSVLG00005002677	ENSSVLG00005002666 ##22	FAM177A1 (ENSSVLG00005002647)	PPP2R3C (ENSSVLG00005002629)	PRORP (ENSSVLG00005002581)	PSMA6 (ENSSVLG00005002482)	NFKBIA (ENSSVLG00005002436)	INSM2 (ENSSVLG00005002423)	RALGAPA1 (ENSSVLG00005001913)	ENSSVLG00005001677	BRMS1L (ENSSVLG00005001649)	ENSSVLG00005001633	MBIP (ENSSVLG00005001579)	NKX2-1 (ENSSVLG00005001554)	NKX2-8 (ENSSVLG00005001540)	PAX9 (ENSSVLG00005001528)	SLC25A21 (ENSSVLG00005001479)
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT01040000240383.b.b.b ##20	ENSGT01040000240383.b.b.a ##20	ENSGT01010000222320.a.a.a.b.j ##17	ENSGT01010000222320.a.a.b.b ##17	ENSGT01010000222320.a.a.a.b.i.a.a.a.b ##17	ENSGT01010000222320.a.a.a.b.i.a.a.a.a ##17	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.a.b #8	ENSGT01010000222320.a.a.a.a.b.i #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Myomorpha	ANCESTRAL SPECIES	23	ENSGT01050000244869.a.a.a.b.a.b.a.b	ENSGT01050000244869.a.a.a.b.a.a.a.b	ENSGT01050000244869.a.a.a.b.a.a.a.a.a	ENSGT00940000159961	ENSGT01050000244869.a.a.a.b.a.b.a.a	ENSGT01010000222320.a.a.a.b.i.a.a.a.a ##17	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.a.b.h #8	ENSGT01010000222320.a.a.a.a.b.i.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Muroidea	ANCESTRAL SPECIES	52				ENSGT01010000222320.a.a.a.b.i.a.a.a.a ##17	ENSGT01010000222320.a.a.a.a.a #11	ENSGT01010000222320.a.b.a.b.h.a #8	ENSGT01010000222320.a.b.a.b.h.b.a #8	ENSGT01010000222320.a.b.a.b.g.a.a #8	ENSGT01010000222320.a.a.a.a.b.i.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT01010000222320.a.a.a.a.a.r #11	ENSGT01010000222320.a.b.a.b.h.a #8	ENSGT01010000222320.a.b.a.b.g.a.b #8	ENSGT01010000222320.a.b.a.b.h.b.b #8	ENSGT01010000222320.a.b.a.b.g.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.c.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.c.a #8	ENSGT01010000222320.a.a.a.a.b.i.b.b.a #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01010000222320.a.a.b.a.d.a.e #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Cricetidae	ANCESTRAL SPECIES	4	ENSGT01010000222320.a.b.a.b.g.b #8	ENSGT01010000222320.a.b.a.b.g.a.b #8	ENSGT01010000222320.a.b.a.b.h.b.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.c.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.c.a #8	ENSGT01010000222320.a.b.a.b.g.a.a #8	ENSGT01010000222320.a.a.a.a.b.i.b.a #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01010000222320.a.a.b.a.d.a.e #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Cricetinae	ANCESTRAL SPECIES	30	ENSGT01010000222320.a.b.a.b.h.b.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.c.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.c.a #8	ENSGT01010000222320.a.b.a.b.g.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.d #8	ENSGT01010000222320.a.b.a.b.g.a.a #8	ENSGT01010000222320.a.a.a.a.b.i.b.a #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.b #7	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01010000222320.a.a.b.a.d.a.e.a #17	ENSGT01010000222320.a.a.b.a.d.a.e.b #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Golden Hamster	MODERN SPECIES	635	ENSMAUG00000020588 ##17	Or8b49 (ENSMAUG00000006932) ##17	ENSMAUG00000009014 #11	Or8b3 (ENSMAUG00000008890) #11	Or8b42 (ENSMAUG00000008924) #7	Or8c10 (ENSMAUG00000011564) #8	Or8c9 (ENSMAUG00000008715) #8	ENSMAUG00000009055 #8	Or8c15 (ENSMAUG00000015387) #8	ENSMAUG00000008692 #8	Or8b12c (ENSMAUG00000001432) #17	ENSMAUG00000000667 #17	ENSMAUG00000008716 #17	ENSMAUG00000021034 #20	Panx3 (ENSMAUG00000019686) #21	Tbrg1 (ENSMAUG00000001218) #22	Siae (ENSMAUG00000013834) #23	Spa17 (ENSMAUG00000005009) #24	Nrgn (ENSMAUG00000018089) #25	Vsig2 (ENSMAUG00000021083) #26	Esam (ENSMAUG00000006606) #27	Msantd2 (ENSMAUG00000010951) #28	Robo3 (ENSMAUG00000016860) #29	Robo4 (ENSMAUG00000007377) #30	Hepacam (ENSMAUG00000018241) #31	Ccdc15 (ENSMAUG00000006584) #32
Chinese hamster chok1gshd	MODERN SPECIES	189	ENSCGRG00001006899 #8	ENSCGRG00001014334 #8	Or8c13 (ENSCGRG00001006869) #8	ENSCGRG00001005294 #7	ENSCGRG00001006508 #7	ENSCGRG00001004694 #7	ENSCGRG00001006261 #7	Or8b8 (ENSCGRG00001007421) #13	Or8b9 (ENSCGRG00001005567) ##17	Or8b12c (ENSCGRG00001018709) #17	ENSCGRG00001004074 #17	ENSCGRG00001004372 #17	ENSCGRG00001005793 #20	ENSCGRG00001009891 #20	PANX (ENSCGRG00001003262) #21	Tbrg1 (ENSCGRG00001023134) #22	Siae (ENSCGRG00001017674) #23	Spa17 (ENSCGRG00001023902) #24	Nrgn (ENSCGRG00001022368) #25	Vsig2 (ENSCGRG00001019705) #26	Esam (ENSCGRG00001003367) #27	Msantd2 (ENSCGRG00001023762) #28	Robo3 (ENSCGRG00001006939) #29	Robo4 (ENSCGRG00001011453) #30	Hepacam (ENSCGRG00001007073) #31	Ccdc15 (ENSCGRG00001017933) #32	Slc37a2 (ENSCGRG00001023925) #33	Tmem218 (ENSCGRG00001020871) #34	Pknox2 (ENSCGRG00001009549) #35	Fez1 (ENSCGRG00001023255) #36	Ei24 (ENSCGRG00001008713)
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT01010000222320.a.b.a.b.h.b.b #8	ENSGT01010000222320.a.b.a.b.g.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.c.b #8	ENSGT01010000222320.a.b.a.b.h.b.a.c.a #8	ENSGT01010000222320.a.b.a.b.g.a.a #8	ENSGT01050000244869.a.a.b	ENSGT01010000222320.a.a.a.a.b.i.b.a #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01010000222320.a.a.b.a.d.a.e #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Prairie vole	MODERN SPECIES	13	Or8c9 (ENSMOCG00000006717) #8	Or8c15 (ENSMOCG00000005900) #8	Or8c17 (ENSMOCG00000005410) #8	ENSMOCG00000006586 #8	ENSMOCG00000017544 #8	ENSMOCG00000016985	Or8b39 (ENSMOCG00000012341) #7	Or8b101 (ENSMOCG00000010544) #7	ENSMOCG00000001106 #7	Or8b8 (ENSMOCG00000006874) #13	Or8b12c (ENSMOCG00000011599) #17	ENSMOCG00000006202 #17	ENSMOCG00000021221 #20	ENSMOCG00000008143 #20	Panx3 (ENSMOCG00000004239) #21	Tbrg1 (ENSMOCG00000018217) #22	Siae (ENSMOCG00000020482) #23	Spa17 (ENSMOCG00000014358) #24	Nrgn (ENSMOCG00000013776) #25	Vsig2 (ENSMOCG00000013088) #26	Esam (ENSMOCG00000011840) #27	Msantd2 (ENSMOCG00000001761) #28	Robo3 (ENSMOCG00000020743) #29	Robo4 (ENSMOCG00000010500) #30	Hepacam (ENSMOCG00000016047) #31	Ccdc15 (ENSMOCG00000014777) #32	Slc37a2 (ENSMOCG00000006398) #33	Tmem218 (ENSMOCG00000021261) #34	Pknox2 (ENSMOCG00000018820) #35	Fez1 (ENSMOCG00000009218) #36	Ei24 (ENSMOCG00000006270)
Northern American deer mouse	MODERN SPECIES	20	ENSPEMG00000029505	ENSPEMG00000027854 #7	ENSPEMG00000026343 #7	ENSPEMG00000028506 #7	ENSPEMG00000028811 #7	ENSPEMG00000031149 #7	Or8b4 (ENSPEMG00000025873) #12	Or8b8 (ENSPEMG00000026462) #13	Or8b9 (ENSPEMG00000026251) ##17	ENSPEMG00000026351 #17	ENSPEMG00000028723 #17	ENSPEMG00000029785 #17	ENSPEMG00000024680	ENSPEMG00000026366 #20	Panx3 (ENSPEMG00000010083) #21	Tbrg1 (ENSPEMG00000011673) #22	Siae (ENSPEMG00000008878) #23	Spa17 (ENSPEMG00000009307) #24	Nrgn (ENSPEMG00000024452) #25	Vsig2 (ENSPEMG00000010489) #26	Esam (ENSPEMG00000012151) #27	Msantd2 (ENSPEMG00000002496) #28	ENSPEMG00000025290	ENSPEMG00000026041	ENSPEMG00000027452	ENSPEMG00000022668	ENSPEMG00000029541	ENSPEMG00000026821	Acrv1 (ENSPEMG00000021529)	Chek1 (ENSPEMG00000021881)	Stt3a (ENSPEMG00000007022)
Murinae	ANCESTRAL SPECIES	3	ENSGT01010000222320.a.b.a.b.h.b.a.c.a.c.a #8	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.a.a.a #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.a #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.a.a.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01010000222320.a.a.b.a.d.a.e.c #17	ENSGT01010000222320.a.a.b.a.d.a.e.d #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Mus	ANCESTRAL SPECIES	4	ENSGT01010000222320.a.a.a.a.b.i.b.b.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.a #7	ENSGT01090000260017.d.c.a.a.a.b.a.a.b	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.a.a.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01010000222320.a.a.b.a.d.a.e.c #17	ENSGT01090000260017.d.c.a.a.a.b.a.a.a	ENSGT01010000222320.a.a.b.a.d.a.e.d #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Mus_A	ANCESTRAL SPECIES	4	ENSGT01010000222320.a.a.a.a.b.i.b.b.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.a #7	ENSGT01090000260017.d.c.a.a.a.b.a.a.b	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.a.a.b.a #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01010000222320.a.a.b.a.d.a.e.c #17	ENSGT01090000260017.d.c.a.a.a.b.a.a.a	ENSGT01010000222320.a.a.b.a.d.a.e.d #17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Mus_B	ANCESTRAL SPECIES	3	ENSGT01010000222320.a.a.a.a.b.i.b.b.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.a #7	ENSGT01090000260017.d.c.a.a.a.b.a.a.b	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.a.a.b.a #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01010000222320.a.a.b.a.d.a.e.c #17	ENSGT01090000260017.d.c.a.a.a.b.a.a.a	ENSGT01010000222320.a.a.b.a.d.a.e.d #17	ENSGT01040000240383.a.b.p.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Mus_C	ANCESTRAL SPECIES	8	ENSGT01010000222320.a.a.a.a.b.i.b.b.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.a #7	ENSGT01090000260017.d.c.a.a.a.b.a.a.b	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.a.a.b.a #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.a.b #7	ENSGT01010000222320.a.a.a.a.b.i.b.b.a.b #7	ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01010000222320.a.a.b.a.d.a.f #17	ENSGT01090000260017.d.c.a.a.a.b.a.a.a	ENSGT01010000222320.a.a.b.a.d.a.e.d #17	ENSGT01040000240383.a.b.p.b #20	ENSGT01040000240383.a.b.o #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
spretus	MODERN SPECIES	18	MGP_SPRETEiJ_G0033130	Or8b40 (MGP_SPRETEiJ_G0033129) #7	Or8b39 (MGP_SPRETEiJ_G0033128) #7	MGP_SPRETEiJ_G0033127	Or8b37 (MGP_SPRETEiJ_G0033126) #7	Or8b36 (MGP_SPRETEiJ_G0033125) #7	Or8b35 (MGP_SPRETEiJ_G0033124) #7	Or8b4 (MGP_SPRETEiJ_G0033123) #12	Or8b8 (MGP_SPRETEiJ_G0033122) #13	Or8b9 (MGP_SPRETEiJ_G0033121) ##17	Or8b12c (MGP_SPRETEiJ_G0033120) #17	MGP_SPRETEiJ_G0033119	Or8b12 (MGP_SPRETEiJ_G0033118) #17	MGP_SPRETEiJ_G0033117 #20	Panx3 (MGP_SPRETEiJ_G0033116) #21	Tbrg1 (MGP_SPRETEiJ_G0033115) #22	Siae (MGP_SPRETEiJ_G0033114) #23	Spa17 (MGP_SPRETEiJ_G0033113) #24	Nrgn (MGP_SPRETEiJ_G0033112) #25	Vsig2 (MGP_SPRETEiJ_G0033111) #26	Esam (MGP_SPRETEiJ_G0033110) #27	MGP_SPRETEiJ_G0033109 #28	Robo3 (MGP_SPRETEiJ_G0033108) #29	Robo4 (MGP_SPRETEiJ_G0033107) #30	Hepacam (MGP_SPRETEiJ_G0033106) #31	Ccdc15 (MGP_SPRETEiJ_G0033105) #32	Slc37a2 (MGP_SPRETEiJ_G0033104) #33	Tmem218 (MGP_SPRETEiJ_G0033103) #34	Pknox2 (MGP_SPRETEiJ_G0033102) #35	Fez1 (MGP_SPRETEiJ_G0033101) #36	Ei24 (MGP_SPRETEiJ_G0033100)
Steppe mouse	MODERN SPECIES	2804	Or8b40 (ENSMSIG00000015567) #7	Or8b101 (ENSMSIG00000015560) #7	Or8b39 (ENSMSIG00000015543) #7	Or8b37 (ENSMSIG00000015522) #7	Or8b36 (ENSMSIG00000015512) #7	Or8b35 (ENSMSIG00000015505) #7	Or8b4 (ENSMSIG00000015494) #12	Or8b8 (ENSMSIG00000015480) #13	Or8b9 (ENSMSIG00000015471) ##17	Or8b12c (ENSMSIG00000015455) #17	Or8b12 (ENSMSIG00000015446) #17	Or8a1b (ENSMSIG00000015433) #20	Or8a1 (ENSMSIG00000015428) #20	ENSMSIG00000015418	Panx3 (ENSMSIG00000015407) #21	Tbrg1 (ENSMSIG00000015383) #22	Siae (ENSMSIG00000015296) #23	Spa17 (ENSMSIG00000015289) #24	Nrgn (ENSMSIG00000015277) #25	Vsig2 (ENSMSIG00000015220) #26	Esam (ENSMSIG00000015194) #27	Msantd2 (ENSMSIG00000015172) #28
Mouse	MODERN SPECIES	18	Or8b101 (ENSMUSG00000095527) #7	Or8b39 (ENSMUSG00000096167) #7	Or8b38 (ENSMUSG00000096424) #7	Or8b37 (ENSMUSG00000095893) #7	Or8b36 (ENSMUSG00000094461) #7	Or8b35 (ENSMUSG00000060583) #7	Or8b4 (ENSMUSG00000066747) #12	Or8b8 (ENSMUSG00000066748) #13	Or8b9 (ENSMUSG00000066749) ##17	Or8b12c (ENSMUSG00000066750) #17	Or8b12b (ENSMUSG00000058628) #17	Or8b12 (ENSMUSG00000063350) #17	Or8a1 (ENSMUSG00000110526) #20	Or8a1b (ENSMUSG00000061165) #20	Panx3 (ENSMUSG00000011118) #21	Tbrg1 (ENSMUSG00000011114) #22	Spa17 (ENSMUSG00000001948) #24	Siae (ENSMUSG00000001942) #23	Nrgn (ENSMUSG00000053310) #25	Vsig2 (ENSMUSG00000001943) #26	Esam (ENSMUSG00000001946) #27	Msantd2 (ENSMUSG00000042138) #28	Robo3 (ENSMUSG00000032128) #29	Robo4 (ENSMUSG00000032125) #30	Hepacam (ENSMUSG00000046240) #31	Ccdc15 (ENSMUSG00000034303) #32	Slc37a2 (ENSMUSG00000032122) #33	Tmem218 (ENSMUSG00000032121) #34	Pknox2 (ENSMUSG00000035934) #35	Fez1 (ENSMUSG00000032118) #36	Ei24 (ENSMUSG00000062762)
Ryukyu mouse	MODERN SPECIES	18	Or8b40 (MGP_CAROLIEiJ_G0032004) #7	Or8b101 (MGP_CAROLIEiJ_G0032003) #7	Or8b39 (MGP_CAROLIEiJ_G0032002) #7	MGP_CAROLIEiJ_G0032001	Or8b37 (MGP_CAROLIEiJ_G0032000) #7	Or8b36 (MGP_CAROLIEiJ_G0031999) #7	Or8b35 (MGP_CAROLIEiJ_G0031998) #7	Or8b4 (MGP_CAROLIEiJ_G0031997) #12	Or8b8 (MGP_CAROLIEiJ_G0031996) #13	Or8b9 (MGP_CAROLIEiJ_G0031995) ##17	Or8b12c (MGP_CAROLIEiJ_G0031994) #17	MGP_CAROLIEiJ_G0031993	Or8b12 (MGP_CAROLIEiJ_G0031992) #17	MGP_CAROLIEiJ_G0031991 #20	Panx3 (MGP_CAROLIEiJ_G0031990) #21	Tbrg1 (MGP_CAROLIEiJ_G0031989) #22	Siae (MGP_CAROLIEiJ_G0031988) #23	Spa17 (MGP_CAROLIEiJ_G0031987) #24	Nrgn (MGP_CAROLIEiJ_G0031986) #25	Vsig2 (MGP_CAROLIEiJ_G0031985) #26	Esam (MGP_CAROLIEiJ_G0031984) #27	Msantd2 (MGP_CAROLIEiJ_G0031983) #28	Robo3 (MGP_CAROLIEiJ_G0031982) #29	Robo4 (MGP_CAROLIEiJ_G0031981) #30	Hepacam (MGP_CAROLIEiJ_G0031980) #31	Ccdc15 (MGP_CAROLIEiJ_G0031979) #32	Slc37a2 (MGP_CAROLIEiJ_G0031978) #33	Tmem218 (MGP_CAROLIEiJ_G0031977) #34	Pknox2 (MGP_CAROLIEiJ_G0031976) #35	Fez1 (MGP_CAROLIEiJ_G0031975) #36	Ei24 (MGP_CAROLIEiJ_G0031974)
Shrew mouse	MODERN SPECIES	1	Or8b40 (MGP_PahariEiJ_G0014868) #7	Or8b101 (MGP_PahariEiJ_G0014867) #7	Or8b39 (MGP_PahariEiJ_G0014866) #7	MGP_PahariEiJ_G0014865	Or8b37 (MGP_PahariEiJ_G0014864) #7	Or8b36 (MGP_PahariEiJ_G0014863) #7	Or8b35 (MGP_PahariEiJ_G0014862) #7	Or8b4 (MGP_PahariEiJ_G0014861) #12	Or8b8 (MGP_PahariEiJ_G0014860) #13	MGP_PahariEiJ_G0014859 ##17	Or8b12c (MGP_PahariEiJ_G0014858) #17	MGP_PahariEiJ_G0014857	Or8b12 (MGP_PahariEiJ_G0014856) #17	MGP_PahariEiJ_G0014855 #20	Panx3 (MGP_PahariEiJ_G0014854) #21	Tbrg1 (MGP_PahariEiJ_G0014853) #22	Siae (MGP_PahariEiJ_G0014852) #23	Spa17 (MGP_PahariEiJ_G0014851) #24	Nrgn (MGP_PahariEiJ_G0014850) #25	Vsig2 (MGP_PahariEiJ_G0014849) #26	Esam (MGP_PahariEiJ_G0014848) #27	Msantd2 (MGP_PahariEiJ_G0014847) #28	Robo3 (MGP_PahariEiJ_G0014846) #29	Robo4 (MGP_PahariEiJ_G0014845) #30	Hepacam (MGP_PahariEiJ_G0014844) #31	Ccdc15 (MGP_PahariEiJ_G0014843) #32	Slc37a2 (MGP_PahariEiJ_G0014842) #33	Tmem218 (MGP_PahariEiJ_G0014841) #34	Pknox2 (MGP_PahariEiJ_G0014840) #35	Fez1 (MGP_PahariEiJ_G0014839) #36	MGP_PahariEiJ_G0014838
Rat	DUPLICATION
Rat	MODERN SPECIES	18	Or8b37 (ENSRNOG00000064411) #7	AC114252.1 (ENSRNOG00000051142) #7	Or8b35 (ENSRNOG00000071182) #7	Or8b101b (ENSRNOG00000065079) #7	Or8b8 (ENSRNOG00000051115) #13	Or8b9 (ENSRNOG00000068475) ##17	Or8b12c (ENSRNOG00000011563) #17	Olr1198 (ENSRNOG00000066352) #17	Or8b12d (ENSRNOG00000063981) #17	Or8b9 (ENSRNOG00000064756) #17	LOC120094365 (ENSRNOG00000062569) #17	Or8b12 (ENSRNOG00000064114) #17	Or8a1 (ENSRNOG00000066152) #20	Or8a1b (ENSRNOG00000064876) #20	Panx3 (ENSRNOG00000031675) #21	Tbrg1 (ENSRNOG00000023850) #22	Siae (ENSRNOG00000031266) #23	Spa17 (ENSRNOG00000010934) #24	Nrgn (ENSRNOG00000010688) #25	Vsig2 (ENSRNOG00000033490) #26	Esam (ENSRNOG00000033217) #27	Msantd2 (ENSRNOG00000009950) #28	Robo3 (ENSRNOG00000030016) #29	Robo4 (ENSRNOG00000049289) #30	Hepacam (ENSRNOG00000009219) #31	Ccdc15 (ENSRNOG00000032180) #32	Slc37a2 (ENSRNOG00000039390) #33	Tmem218 (ENSRNOG00000008757) #34	Pknox2 (ENSRNOG00000028856) #35	Fez1 (ENSRNOG00000006075) #36	Ei24 (ENSRNOG00000030391)
Rat	MODERN SPECIES	12	Vps26a (ENSRNOG00000030683)	Srgn (ENSRNOG00000000394)	Kifbp (ENSRNOG00000000395)	Ddx21 (ENSRNOG00000043099)	Ddx50 (ENSRNOG00000000396)	Stox1 (ENSRNOG00000023712)	Ccar1 (ENSRNOG00000000397)	Rsph4a (ENSRNOG00000049696)	Zup1 (ENSRNOG00000000398)	Kpna5 (ENSRNOG00000030109)	Gprc6a (ENSRNOG00000000401)	ENSRNOG00000070167	Rfx6 (ENSRNOG00000027949)	Vgll2 (ENSRNOG00000000405)	Ros1 (ENSRNOG00000000406)	LOC100911055 (ENSRNOG00000033891) #22	Dcbld1 (ENSRNOG00000000407)	Gopc (ENSRNOG00000000408)	ENSRNOG00000070377	Nepn (ENSRNOG00000000410)	Nus1 (ENSRNOG00000000411)	Slc35f1 (ENSRNOG00000000412)	ENSRNOG00000066051	Cep85l (ENSRNOG00000000414)	ENSRNOG00000066018	Mcm9 (ENSRNOG00000003281)	ENSRNOG00000064723	Asf1a (ENSRNOG00000000415)	Fam184a (ENSRNOG00000026407)	Man1a1 (ENSRNOG00000000800)	RGD1559810 (ENSRNOG00000026207)
Upper Galilee mountains blind mole rat	MODERN SPECIES	424														ENSNGAG00000020184 #20	Panx3 (ENSNGAG00000019745) #21	Tbrg1 (ENSNGAG00000018963) #22	Siae (ENSNGAG00000013767) #23	Spa17 (ENSNGAG00000012396) #24	Nrgn (ENSNGAG00000020480) #25	Vsig2 (ENSNGAG00000000807) #26	Esam (ENSNGAG00000021079) #27	Msantd2 (ENSNGAG00000020716) #28	Robo3 (ENSNGAG00000021375) #29	Robo4 (ENSNGAG00000023244) #30	Hepacam (ENSNGAG00000022312) #31	Ccdc15 (ENSNGAG00000017351) #32	Slc37a2 (ENSNGAG00000019054) #33	Tmem218 (ENSNGAG00000005428) #34	Pknox2 (ENSNGAG00000017813) #35	Fez1 (ENSNGAG00000011753) #36	Ei24 (ENSNGAG00000008005)
Lesser Egyptian jerboa	MODERN SPECIES	190	ENSJJAG00000021829	ENSJJAG00000021921 ##20	ENSJJAG00000001018 ##20	Or10d1 (ENSJJAG00000001467)	ENSJJAG00000003819 ##20	ENSJJAG00000012696 ##20	Tmem225 (ENSJJAG00000006368)	ENSJJAG00000010890 ##17	ENSJJAG00000011560 #8	ENSJJAG00000011808 #8	Or8b42 (ENSJJAG00000012000) #7	Or8b8 (ENSJJAG00000014220) #13	ENSJJAG00000019340 #20	ENSJJAG00000019544	Panx3 (ENSJJAG00000020454) #21	Tbrg1 (ENSJJAG00000020520) #22	Siae (ENSJJAG00000020788) #23	Spa17 (ENSJJAG00000022651) #24	Nrgn (ENSJJAG00000023345) #25	Vsig2 (ENSJJAG00000023365) #26	Esam (ENSJJAG00000023863) #27	Msantd2 (ENSJJAG00000022389) #28	Robo3 (ENSJJAG00000012565) #29	Robo4 (ENSJJAG00000019076) #30	Hepacam (ENSJJAG00000015662) #31	Slc37a2 (ENSJJAG00000015861) #33	Tmem218 (ENSJJAG00000018579) #34	Pknox2 (ENSJJAG00000019019) #35	Fez1 (ENSJJAG00000019444) #36	ENSJJAG00000019574	Ei24 (ENSJJAG00000015344)
Kangaroo rat	MODERN SPECIES	329	Msantd4 (ENSDORG00000023419)	ENSDORG00000023554	Casp1 (ENSDORG00000016257)	Casp4 (ENSDORG00000016256)	Ddi1 (ENSDORG00000002404)	Pdgfd (ENSDORG00000014006)	Dync2h1 (ENSDORG00000010115)	Dcun1d5 (ENSDORG00000001635)	Or8b8 (ENSDORG00000027079) #13	ENSDORG00000024038 #17	ENSDORG00000027629	ENSDORG00000027698 #20	ENSDORG00000024857 #20	ENSDORG00000027724 #20	Panx3 (ENSDORG00000002966) #21	Tbrg1 (ENSDORG00000002733) #22	Siae (ENSDORG00000002735) #23	Spa17 (ENSDORG00000023533) #24	Nrgn (ENSDORG00000002739) #25	Vsig2 (ENSDORG00000002740) #26	Esam (ENSDORG00000028051) #27	Msantd2 (ENSDORG00000002743) #28	Robo3 (ENSDORG00000010665) #29	Robo4 (ENSDORG00000011561) #30	Hepacam (ENSDORG00000013112) #31	Ccdc15 (ENSDORG00000004976) #32	Slc37a2 (ENSDORG00000013140) #33	Tmem218 (ENSDORG00000028050) #34	Pknox2 (ENSDORG00000008635) #35	Fez1 (ENSDORG00000008636) #36	ENSDORG00000010644
Lagomorpha	ANCESTRAL SPECIES	59											ENSGT01010000222320.a.b.b #12	ENSGT01010000222320.a.a.b.a.c #13	ENSGT01010000222320.a.a.b.a.d.b.b ##17	ENSGT01040000240383.a.b #20	ENSGT00940000153972.B #21	ENSGT00390000013374 #22	ENSGT00390000010608 #23	ENSGT00440000039164 #24	ENSGT00440000039324 #25	ENSGT00940000161544 #26	ENSGT00940000157231 #27	ENSGT00390000013593 #28	ENSGT00940000155457 #29	ENSGT00940000161382 #30	ENSGT01100000263551.a #31	ENSGT00500000044966 #32	ENSGT00940000158657 #33	ENSGT00390000016247 #34	ENSGT00940000158793 #35	ENSGT00390000017627.b #36	ENSGT00390000018633
Pika	MODERN SPECIES	2341																TBRG1 (ENSOPRG00000015002) #22	SIAE (ENSOPRG00000015019) #23	ENSOPRG00000015042	NRGN (ENSOPRG00000015047) #25	VSIG2 (ENSOPRG00000015064) #26	ESAM (ENSOPRG00000015077) #27	MSANTD2 (ENSOPRG00000015091) #28
Rabbit	MODERN SPECIES		OR10D3 (ENSOCUG00000027401)	ENSOCUG00000031800	ENSOCUG00000023133	ENSOCUG00000026902 #7	ENSOCUG00000017511	ENSOCUG00000034602	ENSOCUG00000030684	ENSOCUG00000023594 ##20	ENSOCUG00000015188	OR8B4 (ENSOCUG00000015512) #12	OR8B8 (ENSOCUG00000013575) #13	ENSOCUG00000014643 ##17	ENSOCUG00000027281 #20	ENSOCUG00000028222 #20	PANX3 (ENSOCUG00000003024) #21	TBRG1 (ENSOCUG00000003027) #22	SIAE (ENSOCUG00000003036) #23	SPA17 (ENSOCUG00000003044) #24	NRGN (ENSOCUG00000002609) #25	ENSOCUG00000002623 #26	MSANTD2 (ENSOCUG00000002631) #28	ENSOCUG00000026476	ROBO3 (ENSOCUG00000002635) #29	ROBO4 (ENSOCUG00000002647) #30	HEPACAM (ENSOCUG00000002655) #31	CCDC15 (ENSOCUG00000014409) #32	TMEM218 (ENSOCUG00000014753) #34	PKNOX2 (ENSOCUG00000014633) #35	FEZ1 (ENSOCUG00000014646) #36	EI24 (ENSOCUG00000014670)	STT3A (ENSOCUG00000014703)
Tree shrew	MODERN SPECIES	4857																TBRG1 (ENSTBEG00000012422) #22	ENSTBEG00000012601 #23