Bilateria	ANCESTRAL SPECIES																	ENSGT00950000183004 #22
Chordata	DUPLICATION
Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b #22
Vertebrata	DUPLICATION
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.a #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.a #22
Euteleostomi	ANCESTRAL SPECIES	478															ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868
Sarcopterygii	ANCESTRAL SPECIES	357															ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00390000008631.b
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35
Amniota	ANCESTRAL SPECIES	5	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT01030000234637.b.c	ENSGT00940000159855
Mammalia	ANCESTRAL SPECIES	36	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000153661	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Theria	ANCESTRAL SPECIES		ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00940000153661.b	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Eutheria	ANCESTRAL SPECIES	1	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Glires	ANCESTRAL SPECIES	18	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Rodentia	ANCESTRAL SPECIES	12	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Kangaroo rat	MODERN SPECIES	367	ENSDORG00000024484 #7	Hyal4 (ENSDORG00000006155) #8	Hyal6 (ENSDORG00000025388) #9	Wasl (ENSDORG00000011793) #10	Lmod2 (ENSDORG00000027666) #11	Asb15 (ENSDORG00000011790) #12	Ndufa5 (ENSDORG00000027239) #13	Iqub (ENSDORG00000014986) #14	ENSDORG00000030217 #15	Slc13a1 (ENSDORG00000000630) #16	Cadps2 (ENSDORG00000016250) #17	Rnf133 (ENSDORG00000025983) #18	Fezf1 (ENSDORG00000027250) #19	Aass (ENSDORG00000010129) #20	Ptprz1 (ENSDORG00000010123) #21	Fam3c (ENSDORG00000014503) #22	Wnt16 (ENSDORG00000014501) #23	Cped1 (ENSDORG00000014498) #24	Ing3 (ENSDORG00000014497) #25	Tspan12 (ENSDORG00000003102) #26	Kcnd2 (ENSDORG00000003100) #27	ENSDORG00000028967 #28	Ankrd7 (ENSDORG00000002700) #29	Lsm8 (ENSDORG00000027868) #30	Cttnbp2 (ENSDORG00000005026) #31	ENSDORG00000023544 #32	Cftr (ENSDORG00000005421) #33	Asz1 (ENSDORG00000007590) #34	Wnt2 (ENSDORG00000016233) #35	St7 (ENSDORG00000016230) #36	Capza2 (ENSDORG00000016226) #37
Myomorpha	ANCESTRAL SPECIES	8	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Muroidea	ANCESTRAL SPECIES	8	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Cricetidae	ANCESTRAL SPECIES	3	ENSGT01020000230364.a.a.b.a.h #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Cricetinae	ANCESTRAL SPECIES	23	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Chinese hamster chok1gshd	MODERN SPECIES	54	Hyal6 (ENSCGRG00001011375) #9	Wasl (ENSCGRG00001022194) #10	Lmod2 (ENSCGRG00001014874) #11	Asb15 (ENSCGRG00001019273) #12	Ndufa5 (ENSCGRG00001006693) #13	Iqub (ENSCGRG00001019481) #14	Slc13a1 (ENSCGRG00001009482) #16	Tas2r118 (ENSCGRG00001006107)	ENSCGRG00001004003	ENSCGRG00001014291	Rnf133 (ENSCGRG00001011407) #18	Cadps2 (ENSCGRG00001009309) #17	Fezf1 (ENSCGRG00001018145) #19	Aass (ENSCGRG00001014114) #20	Ptprz1 (ENSCGRG00001020740) #21	Fam3c (ENSCGRG00001019403) #22	Wnt16 (ENSCGRG00001022981) #23	Cped1 (ENSCGRG00001009705) #24	Ing3 (ENSCGRG00001012381) #25	Tspan12 (ENSCGRG00001012145) #26	Kcnd2 (ENSCGRG00001013210) #27	ENSCGRG00001021329	ENSCGRG00001021813	Ankrd7 (ENSCGRG00001022051) #29	Lsm8 (ENSCGRG00001000450) #30	Cttnbp2 (ENSCGRG00001010648) #31	Cftr (ENSCGRG00001006106) #33	Asz1 (ENSCGRG00001020481) #34	Wnt2 (ENSCGRG00001005484) #35	St7 (ENSCGRG00001018752) #36	Capza2 (ENSCGRG00001022803) #37
Golden Hamster	MODERN SPECIES	696	Hyal5 (ENSMAUG00000009239) #7	Spam1 (ENSMAUG00000021805) #7	Hyal4 (ENSMAUG00000002046) #8	Wasl (ENSMAUG00000019789) #10	Lmod2 (ENSMAUG00000019039) #11	Asb15 (ENSMAUG00000019338) #12	ENSMAUG00000008323 #13	Iqub (ENSMAUG00000010910) #14	Slc13a1 (ENSMAUG00000021116) #16	Rnf148 (ENSMAUG00000002390)	Cadps2 (ENSMAUG00000014481) #17	Fezf1 (ENSMAUG00000014725) #19	Aass (ENSMAUG00000021228) #20	Ptprz1 (ENSMAUG00000013366) #21	ENSMAUG00000002182	Fam3c (ENSMAUG00000018611) #22	Wnt16 (ENSMAUG00000015173) #23	Cped1 (ENSMAUG00000012676) #24	Ing3 (ENSMAUG00000001366) #25	Tspan12 (ENSMAUG00000013716) #26	Kcnd2 (ENSMAUG00000014403) #27	Lsm8 (ENSMAUG00000020287) #30
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT01020000230364.a.a.b.a.h #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	16	Spam1 (ENSPEMG00000000657) #7	Hyal4 (ENSPEMG00000011752) #8	Hyal6 (ENSPEMG00000019262) #9	Wasl (ENSPEMG00000008381) #10	Lmod2 (ENSPEMG00000009160) #11	Asb15 (ENSPEMG00000019026) #12	Ndufa5 (ENSPEMG00000009370) #13	Iqub (ENSPEMG00000016127) #14	Slc13a1 (ENSPEMG00000018404) #16	Tas2r118 (ENSPEMG00000016153)	Rnf133 (ENSPEMG00000016095) #18	Cadps2 (ENSPEMG00000018807) #17	Fezf1 (ENSPEMG00000010541) #19	Aass (ENSPEMG00000008591) #20	Ptprz1 (ENSPEMG00000014955) #21	ENSPEMG00000022248 #22	Wnt16 (ENSPEMG00000024607) #23	Cped1 (ENSPEMG00000024278) #24	Ing3 (ENSPEMG00000021561) #25	Tspan12 (ENSPEMG00000016235) #26	Kcnd2 (ENSPEMG00000012871) #27	ENSPEMG00000027299	ENSPEMG00000025522	ENSPEMG00000025502	ENSPEMG00000026145	Ankrd7 (ENSPEMG00000015569) #29	Lsm8 (ENSPEMG00000009153) #30	Cttnbp2 (ENSPEMG00000006365) #31	Cftr (ENSPEMG00000008730) #33	Asz1 (ENSPEMG00000005011) #34	Wnt2 (ENSPEMG00000024059) #35
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000026533	Or52ab4 (ENSPEMG00000022909)	Or52ad1 (ENSPEMG00000027142)	Or51l14 (ENSPEMG00000028112)	Or52d13 (ENSPEMG00000008106)	Or52ae7 (ENSPEMG00000030496)	Or51af1 (ENSPEMG00000031274)	Or51ag1 (ENSPEMG00000002557)	ENSPEMG00000024460	Or51ab3 (ENSPEMG00000029790)	Or51ah3 (ENSPEMG00000007243)	Or51ac3 (ENSPEMG00000028003)	ENSPEMG00000027359	Or52z13 (ENSPEMG00000025145)	Or51v14 (ENSPEMG00000029542)	ENSPEMG00000021939 #22	Or52a33 (ENSPEMG00000027196)	ENSPEMG00000028935	Or52ae9 (ENSPEMG00000030860)	Or51l4 (ENSPEMG00000030172)	ENSPEMG00000027503	Or52z1 (ENSPEMG00000015195)	ENSPEMG00000031168	Hbb-y (ENSPEMG00000027150)	Or51b4 (ENSPEMG00000027571)	Or51b17 (ENSPEMG00000000854)	ENSPEMG00000001886	Or51m1 (ENSPEMG00000028384)	ENSPEMG00000008000	Or51k1 (ENSPEMG00000008229)	Or51i1 (ENSPEMG00000003217)
Prairie vole	MODERN SPECIES	350								Stk26 (ENSMOCG00000012674)	Frmd7 (ENSMOCG00000017123)	Rap2c (ENSMOCG00000007198)	Mbnl3 (ENSMOCG00000011470)	Hs6st2 (ENSMOCG00000014810)	Usp26 (ENSMOCG00000011350)	Aass (ENSMOCG00000015947) #20	Ptprz1 (ENSMOCG00000007634) #21	Fam3c (ENSMOCG00000005307) #22	Wnt16 (ENSMOCG00000021643) #23	Cped1 (ENSMOCG00000013716) #24	Ing3 (ENSMOCG00000015011) #25	Tspan12 (ENSMOCG00000018964) #26	Kcnd2 (ENSMOCG00000022409) #27	Lsm8 (ENSMOCG00000001688) #30	ENSMOCG00000018450	Cttnbp2 (ENSMOCG00000010478) #31	Cftr (ENSMOCG00000007371) #33	Asz1 (ENSMOCG00000001767) #34	Wnt2 (ENSMOCG00000022808) #35	St7 (ENSMOCG00000016312) #36	Capza2 (ENSMOCG00000017352) #37	Met (ENSMOCG00000006344)	Cav1 (ENSMOCG00000019224)
Murinae	ANCESTRAL SPECIES	4	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Mus	ANCESTRAL SPECIES	20	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Mus_A	ANCESTRAL SPECIES	7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.i #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Mus_B	ANCESTRAL SPECIES	20	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.i #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Mouse	MODERN SPECIES	15	Hyal4 (ENSMUSG00000029680) #8	Hyal6 (ENSMUSG00000029679) #9	Wasl (ENSMUSG00000029684) #10	Lmod2 (ENSMUSG00000029683) #11	Asb15 (ENSMUSG00000029685) #12	Ndufa5 (ENSMUSG00000023089) #13	Iqub (ENSMUSG00000046192) #14	Slc13a1 (ENSMUSG00000029700) #16	Tas2r118 (ENSMUSG00000043865)	Rnf148 (ENSMUSG00000078179)	Rnf133 (ENSMUSG00000051956) #18	Cadps2 (ENSMUSG00000017978) #17	Fezf1 (ENSMUSG00000029697) #19	Aass (ENSMUSG00000029695) #20	Ptprz1 (ENSMUSG00000068748) #21	Fam3c (ENSMUSG00000029672) #22	Wnt16 (ENSMUSG00000029671) #23	Cped1 (ENSMUSG00000062980) #24	Ing3 (ENSMUSG00000029670) #25	Tspan12 (ENSMUSG00000029669) #26	Kcnd2 (ENSMUSG00000060882) #27	Ankrd7 (ENSMUSG00000029517) #29	Lsm8 (ENSMUSG00000044155) #30	Cttnbp2 (ENSMUSG00000000416) #31	Cftr (ENSMUSG00000041301) #33	Asz1 (ENSMUSG00000010796) #34	Wnt2 (ENSMUSG00000010797) #35	St7 (ENSMUSG00000029534) #36	Capza2 (ENSMUSG00000015733) #37	Met (ENSMUSG00000009376)	Cav1 (ENSMUSG00000007655)
Mus_C	ANCESTRAL SPECIES	19	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.i #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Steppe mouse	MODERN SPECIES	3300														Ptprz1 (ENSMSIG00000018983) #21	ENSMSIG00000019192	Fam3c (ENSMSIG00000019205) #22	Wnt16 (ENSMSIG00000019307) #23	Cped1 (ENSMSIG00000019364) #24	Ing3 (ENSMSIG00000019386) #25	Tspan12 (ENSMSIG00000019433) #26	Kcnd2 (ENSMSIG00000019456) #27	ENSMSIG00000019470	ENSMSIG00000019486	ENSMSIG00000019508	ENSMSIG00000019517	Ankrd7 (ENSMSIG00000019528) #29	ENSMSIG00000019550 #30	ENSMSIG00000019569	Cttnbp2 (ENSMSIG00000019587) #31
spretus	MODERN SPECIES	15	Hyal4 (MGP_SPRETEiJ_G0029147) #8	Hyal6 (MGP_SPRETEiJ_G0029146) #9	Wasl (MGP_SPRETEiJ_G0029145) #10	Lmod2 (MGP_SPRETEiJ_G0029144) #11	Asb15 (MGP_SPRETEiJ_G0029143) #12	Ndufa5 (MGP_SPRETEiJ_G0029142) #13	Iqub (MGP_SPRETEiJ_G0029141) #14	Slc13a1 (MGP_SPRETEiJ_G0029140) #16	Tas2r118 (MGP_SPRETEiJ_G0029139)	Rnf148 (MGP_SPRETEiJ_G0029138)	Rnf133 (MGP_SPRETEiJ_G0029137) #18	Cadps2 (MGP_SPRETEiJ_G0029136) #17	Fezf1 (MGP_SPRETEiJ_G0029135) #19	Aass (MGP_SPRETEiJ_G0029134) #20	Ptprz1 (MGP_SPRETEiJ_G0029133) #21	Fam3c (MGP_SPRETEiJ_G0029132) #22	Wnt16 (MGP_SPRETEiJ_G0029131) #23	Cped1 (MGP_SPRETEiJ_G0029130) #24	Ing3 (MGP_SPRETEiJ_G0029129) #25	Tspan12 (MGP_SPRETEiJ_G0029128) #26	Kcnd2 (MGP_SPRETEiJ_G0029127) #27	Ankrd7 (MGP_SPRETEiJ_G0029126) #29	Lsm8 (MGP_SPRETEiJ_G0029125) #30	Cttnbp2 (MGP_SPRETEiJ_G0029124) #31	Cftr (MGP_SPRETEiJ_G0029123) #33	Asz1 (MGP_SPRETEiJ_G0029122) #34	Wnt2 (MGP_SPRETEiJ_G0029121) #35	St7 (MGP_SPRETEiJ_G0029120) #36	Capza2 (MGP_SPRETEiJ_G0029119) #37	Met (MGP_SPRETEiJ_G0029118)	Cav1 (MGP_SPRETEiJ_G0029117)
Ryukyu mouse	MODERN SPECIES	15	Hyal4 (MGP_CAROLIEiJ_G0028147) #8	Hyal6 (MGP_CAROLIEiJ_G0028146) #9	Wasl (MGP_CAROLIEiJ_G0028145) #10	Lmod2 (MGP_CAROLIEiJ_G0028144) #11	Asb15 (MGP_CAROLIEiJ_G0028143) #12	Ndufa5 (MGP_CAROLIEiJ_G0028142) #13	Iqub (MGP_CAROLIEiJ_G0028141) #14	Slc13a1 (MGP_CAROLIEiJ_G0028140) #16	Tas2r118 (MGP_CAROLIEiJ_G0028139)	Rnf148 (MGP_CAROLIEiJ_G0028138)	Rnf133 (MGP_CAROLIEiJ_G0028137) #18	Cadps2 (MGP_CAROLIEiJ_G0028136) #17	Fezf1 (MGP_CAROLIEiJ_G0028135) #19	Aass (MGP_CAROLIEiJ_G0028134) #20	Ptprz1 (MGP_CAROLIEiJ_G0028133) #21	Fam3c (MGP_CAROLIEiJ_G0028132) #22	Wnt16 (MGP_CAROLIEiJ_G0028131) #23	Cped1 (MGP_CAROLIEiJ_G0028130) #24	Ing3 (MGP_CAROLIEiJ_G0028129) #25	Tspan12 (MGP_CAROLIEiJ_G0028128) #26	Kcnd2 (MGP_CAROLIEiJ_G0028127) #27	Ankrd7 (MGP_CAROLIEiJ_G0028126) #29	Lsm8 (MGP_CAROLIEiJ_G0028125) #30	Cttnbp2 (MGP_CAROLIEiJ_G0028124) #31	Cftr (MGP_CAROLIEiJ_G0028123) #33	Asz1 (MGP_CAROLIEiJ_G0028122) #34	Wnt2 (MGP_CAROLIEiJ_G0028121) #35	St7 (MGP_CAROLIEiJ_G0028120) #36	Capza2 (MGP_CAROLIEiJ_G0028119) #37	Met (MGP_CAROLIEiJ_G0028118)	Cav1 (MGP_CAROLIEiJ_G0028117)
Shrew mouse	MODERN SPECIES	11	Hyal4 (MGP_PahariEiJ_G0021903) #8	Hyal6 (MGP_PahariEiJ_G0021902) #9	Wasl (MGP_PahariEiJ_G0021901) #10	Lmod2 (MGP_PahariEiJ_G0021900) #11	Asb15 (MGP_PahariEiJ_G0021899) #12	Ndufa5 (MGP_PahariEiJ_G0021898) #13	Iqub (MGP_PahariEiJ_G0021897) #14	Slc13a1 (MGP_PahariEiJ_G0021896) #16	Tas2r118 (MGP_PahariEiJ_G0021895)	Rnf148 (MGP_PahariEiJ_G0021894)	Rnf133 (MGP_PahariEiJ_G0021893) #18	Cadps2 (MGP_PahariEiJ_G0021892) #17	Fezf1 (MGP_PahariEiJ_G0021891) #19	Aass (MGP_PahariEiJ_G0021890) #20	Ptprz1 (MGP_PahariEiJ_G0021889) #21	Fam3c (MGP_PahariEiJ_G0021888) #22	Wnt16 (MGP_PahariEiJ_G0021887) #23	Cped1 (MGP_PahariEiJ_G0021886) #24	Ing3 (MGP_PahariEiJ_G0021885) #25	Tspan12 (MGP_PahariEiJ_G0021884) #26	Kcnd2 (MGP_PahariEiJ_G0021883) #27	Ankrd7 (MGP_PahariEiJ_G0021882) #29	MGP_PahariEiJ_G0021881 #30	Cttnbp2 (MGP_PahariEiJ_G0021880) #31	Cftr (MGP_PahariEiJ_G0021879) #33	Asz1 (MGP_PahariEiJ_G0021878) #34	Wnt2 (MGP_PahariEiJ_G0021877) #35	St7 (MGP_PahariEiJ_G0021876) #36	Capza2 (MGP_PahariEiJ_G0021875) #37	Met (MGP_PahariEiJ_G0021874)	Cav1 (MGP_PahariEiJ_G0021873)
Rat	MODERN SPECIES	14	Wasl (ENSRNOG00000006975) #10	Lmod2 (ENSRNOG00000045831) #11	Asb15 (ENSRNOG00000006365) #12	Ndufa5 (ENSRNOG00000071062) #13	Iqub (ENSRNOG00000021729) #14	Slc13a1 (ENSRNOG00000008121) #16	Tas2r118 (ENSRNOG00000021799)	Rnf133 (ENSRNOG00000065130) #18	Cadps2 (ENSRNOG00000007636) #17	Fezf1 (ENSRNOG00000007608) #19	ENSRNOG00000068406	AABR07025928.1 (ENSRNOG00000056660)	Aass (ENSRNOG00000039494) #20	Ptprz1 (ENSRNOG00000006030) #21	ENSRNOG00000063098	Fam3c (ENSRNOG00000060349) #22	Wnt16 (ENSRNOG00000005781) #23	Cped1 (ENSRNOG00000021840) #24	Ing3 (ENSRNOG00000005496) #25	ENSRNOG00000064820	Tspan12 (ENSRNOG00000059016) #26	Kcnd2 (ENSRNOG00000067416) #27	LOC685171 (ENSRNOG00000058543)	Ankrd7 (ENSRNOG00000055481)	Lsm8 (ENSRNOG00000070946) #30	Cttnbp2 (ENSRNOG00000061845) #31	Cftr (ENSRNOG00000055103) #33	ENSRNOG00000067965	Asz1 (ENSRNOG00000060343) #34	Wnt2 (ENSRNOG00000051905) #35	AC123138.1 (ENSRNOG00000012822)
Upper Galilee mountains blind mole rat	MODERN SPECIES	621										Slc13a1 (ENSNGAG00000005881) #16	Tas2r118 (ENSNGAG00000017996)	Cadps2 (ENSNGAG00000015257) #17	Fezf1 (ENSNGAG00000014433) #19	Aass (ENSNGAG00000016795) #20	Ptprz1 (ENSNGAG00000013149) #21	Fam3c (ENSNGAG00000015577) #22	Wnt16 (ENSNGAG00000016047) #23	Cped1 (ENSNGAG00000020573) #24	Ing3 (ENSNGAG00000004143) #25	Tspan12 (ENSNGAG00000004886) #26	Kcnd2 (ENSNGAG00000011359) #27
Lesser Egyptian jerboa	MODERN SPECIES	67	Lmod2 (ENSJJAG00000001036) #11	Asb15 (ENSJJAG00000012943) #12	ENSJJAG00000010459 #13	Slc13a1 (ENSJJAG00000022062) #16	ENSJJAG00000010213	Tas2r118 (ENSJJAG00000000517)	ENSJJAG00000021889	Rnf148 (ENSJJAG00000020410)	Rnf133 (ENSJJAG00000005201) #18	Cadps2 (ENSJJAG00000016732) #17	Fezf1 (ENSJJAG00000014803) #19	Aass (ENSJJAG00000003015) #20	Ptprz1 (ENSJJAG00000014324) #21	ENSJJAG00000018547	ENSJJAG00000020378	Fam3c (ENSJJAG00000019764) #22	Wnt16 (ENSJJAG00000016207) #23	ENSJJAG00000013375	Cped1 (ENSJJAG00000023207) #24	Ing3 (ENSJJAG00000007662) #25	Tspan12 (ENSJJAG00000006214) #26	Kcnd2 (ENSJJAG00000000160) #27	ENSJJAG00000019540	ENSJJAG00000016745	ENSJJAG00000011628	Lsm8 (ENSJJAG00000009031) #30	ENSJJAG00000003447	Cttnbp2 (ENSJJAG00000013148) #31	ENSJJAG00000022583 #33	Asz1 (ENSJJAG00000022495) #34	Wnt2 (ENSJJAG00000017203) #35
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619.l #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a	ENSGT00950000183006.A.b
Naked mole-rat female	DUPLICATION
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	5	SPAM1 (ENSHGLG00000006133) #7	ENSHGLG00000007516 #9	WASL (ENSHGLG00000008493) #10	LMOD2 (ENSHGLG00000003814) #11	ASB15 (ENSHGLG00000004129) #12	NDUFA5 (ENSHGLG00000042692) #13	IQUB (ENSHGLG00000007200) #14	SLC13A1 (ENSHGLG00000019390) #16	ENSHGLG00000048989	TAS2R16 (ENSHGLG00000044095)	RNF148 (ENSHGLG00000033439)	CADPS2 (ENSHGLG00000017751) #17	FEZF1 (ENSHGLG00000006102) #19	AASS (ENSHGLG00000006193) #20	PTPRZ1 (ENSHGLG00000007675) #21	ENSHGLG00000019063 #22	WNT16 (ENSHGLG00000040512) #23	CPED1 (ENSHGLG00000007984) #24	ING3 (ENSHGLG00000008632) #25	TSPAN12 (ENSHGLG00000009931) #26	ENSHGLG00000010555 #27	ENSHGLG00000010919	ENSHGLG00000006757	ENSHGLG00000038825	NAA38 (ENSHGLG00000043821) #30	ENSHGLG00000037153	ENSHGLG00000002151 #33	ENSHGLG00000041588	ASZ1 (ENSHGLG00000002226) #34	WNT2 (ENSHGLG00000036817) #35	ENSHGLG00000003310
Naked mole-rat female	MODERN SPECIES	7	ZNF622 (ENSHGLG00000040123)	ENSHGLG00000042572	ENSHGLG00000047002	ENSHGLG00000005413	FBXL7 (ENSHGLG00000039624)	ENSHGLG00000049744	ANKH (ENSHGLG00000009005)	OTULIN (ENSHGLG00000008326)	ENSHGLG00000040674	OTULINL (ENSHGLG00000007364)	ENSHGLG00000004346	ENSHGLG00000004104	ENSHGLG00000034661	ENSHGLG00000017230	ENSHGLG00000034637	ENSHGLG00000032946 #22	ENSHGLG00000007547	ENSHGLG00000015867	ANKRD33B (ENSHGLG00000036584)	ENSHGLG00000004654	MARCHF6 (ENSHGLG00000003823)	CMBL (ENSHGLG00000044949)	CCT5 (ENSHGLG00000015664)	ATPSCKMT (ENSHGLG00000033623)	ENSHGLG00000036712	ENSHGLG00000039033	ENSHGLG00000039099	ENSHGLG00000035254	ENSHGLG00000049198	ENSHGLG00000045152	SEMA5A (ENSHGLG00000017629)
Naked mole-rat female	MODERN SPECIES	9	C18orf25 (ENSHGLG00000041108)	ENSHGLG00000036445	ENSHGLG00000036850	ENSHGLG00000009522	PSTPIP2 (ENSHGLG00000005740)	SLC14A1 (ENSHGLG00000007316)	ENSHGLG00000005880	ENSHGLG00000046959	ENSHGLG00000033588	ENSHGLG00000040364	ENSHGLG00000001864	ENSHGLG00000041163	ENSHGLG00000043125	ENSHGLG00000002070	ENSHGLG00000039994	ENSHGLG00000048003 #22	ENSHGLG00000048589	RIT2 (ENSHGLG00000002499)	ENSHGLG00000037189	ENSHGLG00000001588	PIK3C3 (ENSHGLG00000002317)	ENSHGLG00000049729	ENSHGLG00000040708	ENSHGLG00000003144	ENSHGLG00000049047	CELF4 (ENSHGLG00000003130)	KIAA1328 (ENSHGLG00000044346)	ENSHGLG00000035997	FHOD3 (ENSHGLG00000000428)	MOCOS (ENSHGLG00000001785)	ELP2 (ENSHGLG00000001838)
Hystricomorpha_a	ANCESTRAL SPECIES	43	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619.l #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a	ENSGT00840000131243
Hystricomorpha_b	ANCESTRAL SPECIES	85	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619.l #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27
Long-tailed chinchilla	MODERN SPECIES	186	GPR37 (ENSCLAG00000004210)	SPAM1 (ENSCLAG00000004068) #7	HYAL4 (ENSCLAG00000004024) #8	ENSCLAG00000003732 #9	WASL (ENSCLAG00000003691) #10	LMOD2 (ENSCLAG00000003580) #11	ASB15 (ENSCLAG00000007102) #12	NDUFA5 (ENSCLAG00000006860) #13	IQUB (ENSCLAG00000006424) #14	SLC13A1 (ENSCLAG00000011173) #16	RNF133 (ENSCLAG00000016991) #18	CADPS2 (ENSCLAG00000008518) #17	FEZF1 (ENSCLAG00000007477) #19	AASS (ENSCLAG00000008604) #20	PTPRZ1 (ENSCLAG00000007614) #21	FAM3C (ENSCLAG00000006898) #22	WNT16 (ENSCLAG00000006294) #23	CPED1 (ENSCLAG00000005090) #24	ING3 (ENSCLAG00000004878) #25	TSPAN12 (ENSCLAG00000004712) #26	KCND2 (ENSCLAG00000004173) #27	ENSCLAG00000004090
Degu	MODERN SPECIES	211	HYAL4 (ENSODEG00000013266) #8	WASL (ENSODEG00000012985) #10	LMOD2 (ENSODEG00000011500) #11	ASB15 (ENSODEG00000012356) #12	ENSODEG00000011877 #13	IQUB (ENSODEG00000012185) #14	SLC13A1 (ENSODEG00000012195) #16	ENSODEG00000011569	RNF133 (ENSODEG00000011427) #18	CADPS2 (ENSODEG00000011793) #17	FEZF1 (ENSODEG00000011539) #19	AASS (ENSODEG00000011908) #20	PTPRZ1 (ENSODEG00000015174) #21	ENSODEG00000011725	ENSODEG00000013194	FAM3C (ENSODEG00000010369) #22	WNT16 (ENSODEG00000010930) #23	CPED1 (ENSODEG00000011686) #24	ING3 (ENSODEG00000012244) #25	TSPAN12 (ENSODEG00000012176) #26	KCND2 (ENSODEG00000011671) #27	ENSODEG00000010823	ENSODEG00000019823
Guinea pig	MODERN SPECIES	11	SPAM1 (ENSCPOG00000001716) #7	HYAL4 (ENSCPOG00000013594) #8	ENSCPOG00000027329 #9	WASL (ENSCPOG00000003284) #10	LMOD2 (ENSCPOG00000034650) #11	ASB15 (ENSCPOG00000025748) #12	NDUFA5 (ENSCPOG00000030629) #13	IQUB (ENSCPOG00000006286) #14	SLC13A1 (ENSCPOG00000006440) #16	TAS2R16 (ENSCPOG00000007419)	RNF133 (ENSCPOG00000035136) #18	CADPS2 (ENSCPOG00000005875) #17	FEZF1 (ENSCPOG00000013096) #19	AASS (ENSCPOG00000007522) #20	PTPRZ1 (ENSCPOG00000039416) #21	FAM3C (ENSCPOG00000005639) #22	WNT16 (ENSCPOG00000005635) #23	CPED1 (ENSCPOG00000007693) #24	ING3 (ENSCPOG00000023225) #25	TSPAN12 (ENSCPOG00000011851) #26	KCND2 (ENSCPOG00000011847) #27	LSM8 (ENSCPOG00000035673) #30	CTTNBP2 (ENSCPOG00000004194) #31	CFTR (ENSCPOG00000012767) #33	ASZ1 (ENSCPOG00000009750) #34	WNT2 (ENSCPOG00000033615) #35	ST7 (ENSCPOG00000015621) #36	CAPZA2 (ENSCPOG00000007677) #37	MET (ENSCPOG00000013525)	CAV1 (ENSCPOG00000002524)	ENSCPOG00000031628
Sciuridae	ANCESTRAL SPECIES	7	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000182222
Marmotini	ANCESTRAL SPECIES	35	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212.y #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Marmotini_b	ANCESTRAL SPECIES	175	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614
Arctic ground squirrel	MODERN SPECIES	62	TMEM229A (ENSUPAG00010017518)	SPAM1 (ENSUPAG00010017450) #7	HYAL4 (ENSUPAG00010017443) #8	ENSUPAG00010017312 #9	WASL (ENSUPAG00010017300) #10	LMOD2 (ENSUPAG00010017292) #11	ASB15 (ENSUPAG00010017255) #12	ENSUPAG00010017244 #13	IQUB (ENSUPAG00010017217) #14	SLC13A1 (ENSUPAG00010017198) #16	TAS2R16 (ENSUPAG00010017195)	CADPS2 (ENSUPAG00010016014) #17	FEZF1 (ENSUPAG00010015995) #19	AASS (ENSUPAG00010015951) #20	PTPRZ1 (ENSUPAG00010015800) #21	FAM3C (ENSUPAG00010015781) #22	WNT16 (ENSUPAG00010015755) #23	CPED1 (ENSUPAG00010015735) #24	ING3 (ENSUPAG00010015709) #25	TSPAN12 (ENSUPAG00010015684) #26	KCND2 (ENSUPAG00010015672) #27	ENSUPAG00010015665
Squirrel	MODERN SPECIES	205	GPR37 (ENSSTOG00000008778)	TMEM229A (ENSSTOG00000028439)	SPAM1 (ENSSTOG00000002602) #7	HYAL4 (ENSSTOG00000002598) #8	ENSSTOG00000026435 #9	WASL (ENSSTOG00000001892) #10	LMOD2 (ENSSTOG00000026603) #11	ASB15 (ENSSTOG00000001877) #12	NDUFA5 (ENSSTOG00000027404) #13	IQUB (ENSSTOG00000008080) #14	SLC13A1 (ENSSTOG00000012086) #16	CADPS2 (ENSSTOG00000008633) #17	FEZF1 (ENSSTOG00000022201) #19	AASS (ENSSTOG00000015486) #20	PTPRZ1 (ENSSTOG00000025909) #21	FAM3C (ENSSTOG00000006608) #22	WNT16 (ENSSTOG00000006593) #23	CPED1 (ENSSTOG00000006527) #24	ING3 (ENSSTOG00000004039) #25	TSPAN12 (ENSSTOG00000000209) #26	KCND2 (ENSSTOG00000030945) #27
Alpin marmot	MODERN SPECIES	22	SPAM1 (ENSMMMG00000015253) #7	HYAL4 (ENSMMMG00000015235) #8	ENSMMMG00000015187 #9	WASL (ENSMMMG00000015176) #10	LMOD2 (ENSMMMG00000015170) #11	ASB15 (ENSMMMG00000015148) #12	NDUFA5 (ENSMMMG00000015124) #13	IQUB (ENSMMMG00000015110) #14	SLC13A1 (ENSMMMG00000015090) #16	TAS2R16 (ENSMMMG00000015086)	RNF148 (ENSMMMG00000015069)	CADPS2 (ENSMMMG00000015032) #17	FEZF1 (ENSMMMG00000015014) #19	AASS (ENSMMMG00000014988) #20	PTPRZ1 (ENSMMMG00000014884) #21	FAM3C (ENSMMMG00000014872) #22	WNT16 (ENSMMMG00000014850) #23	CPED1 (ENSMMMG00000014806) #24	ING3 (ENSMMMG00000014787) #25	TSPAN12 (ENSMMMG00000014770) #26	KCND2 (ENSMMMG00000014763) #27	ENSMMMG00000014759	ENSMMMG00000014735 #29	ENSMMMG00000014734	CTTNBP2 (ENSMMMG00000014680) #31	ENSMMMG00000014643 #33	ASZ1 (ENSMMMG00000014625) #34	WNT2 (ENSMMMG00000014617) #35	ST7 (ENSMMMG00000014467) #36	CAPZA2 (ENSMMMG00000014429) #37	MET (ENSMMMG00000014368)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	17	SPAM1 (ENSSVLG00005007942) #7	HYAL4 (ENSSVLG00005008218) #8	ENSSVLG00005008265 #9	WASL (ENSSVLG00005008370) #10	LMOD2 (ENSSVLG00005008381) #11	ASB15 (ENSSVLG00005008414) #12	ENSSVLG00005008480 #13	ENSSVLG00005008606 #14	SLC13A1 (ENSSVLG00005008725) #16	TAS2R16 (ENSSVLG00005008847)	CADPS2 (ENSSVLG00005008973) #17	FEZF1 (ENSSVLG00005009793) #19	AASS (ENSSVLG00005009890) #20	PTPRZ1 (ENSSVLG00005010362) #21	ENSSVLG00005013132	FAM3C (ENSSVLG00005013224) #22	WNT16 (ENSSVLG00005013269) #23	CPED1 (ENSSVLG00005013406) #24	ING3 (ENSSVLG00005013543) #25	TSPAN12 (ENSSVLG00005013639) #26	KCND2 (ENSSVLG00005013713) #27	ENSSVLG00005013739	ENSSVLG00005013879 #29	LSM8 (ENSSVLG00005014022) #30	CTTNBP2 (ENSSVLG00005014155) #31	CFTR (ENSSVLG00005014470) #33	ENSSVLG00005015363 #34	WNT2 (ENSSVLG00005015494) #35	ST7 (ENSSVLG00005015943) #36	CAPZA2 (ENSSVLG00005017995) #37	ENSSVLG00005018122
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005024377	LDOC1 (ENSSVLG00005024361)	ENSSVLG00005024344	ENSSVLG00005024337	ENSSVLG00005024311	ENSSVLG00005024281	ENSSVLG00005024259	SLITRK4 (ENSSVLG00005024239)	ENSSVLG00005024221	ENSSVLG00005024178	ENSSVLG00005024153	ENSSVLG00005024138	SLITRK2 (ENSSVLG00005024126)	ENSSVLG00005024095	ENSSVLG00005024085	ENSSVLG00005024061 #22	FMR1 (ENSSVLG00005023968)	FMR1NB (ENSSVLG00005023923)	AFF2 (ENSSVLG00005023603)	IDS (ENSSVLG00005023489)	ENSSVLG00005023440	ENSSVLG00005023405	ENSSVLG00005023391	TMEM185A (ENSSVLG00005023306)	ENSSVLG00005023272	ENSSVLG00005023222	ENSSVLG00005023183	ENSSVLG00005023146	MTM1 (ENSSVLG00005023047)	MTMR1 (ENSSVLG00005022934)	CD99L2 (ENSSVLG00005022834)
Lagomorpha	ANCESTRAL SPECIES	24	ENSGT01100000263518.B.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Rabbit	MODERN SPECIES	18	WASL (ENSOCUG00000008373) #10	LMOD2 (ENSOCUG00000017131) #11	ENSOCUG00000038499	ASB15 (ENSOCUG00000017124) #12	ENSOCUG00000030143 #13	IQUB (ENSOCUG00000009553) #14	ENSOCUG00000034895	SLC13A1 (ENSOCUG00000001022) #16	TAS2R16 (ENSOCUG00000017889)	CADPS2 (ENSOCUG00000007425) #17	ENSOCUG00000033009	ENSOCUG00000039223	FEZF1 (ENSOCUG00000021285) #19	AASS (ENSOCUG00000013237) #20	PTPRZ1 (ENSOCUG00000013209) #21	FAM3C (ENSOCUG00000003351) #22	WNT16 (ENSOCUG00000014744) #23	CPED1 (ENSOCUG00000005778) #24	ING3 (ENSOCUG00000001881) #25	ENSOCUG00000034467	TSPAN12 (ENSOCUG00000001875) #26	KCND2 (ENSOCUG00000004149) #27	ENSOCUG00000037642	ENSOCUG00000023965	ENSOCUG00000032257	ENSOCUG00000021922 #29	LSM8 (ENSOCUG00000017359) #30	CTTNBP2 (ENSOCUG00000001386) #31	ENSOCUG00000038182	CFTR (ENSOCUG00000010733) #33	ASZ1 (ENSOCUG00000015962) #34
Pika	MODERN SPECIES	4003																FAM3C (ENSOPRG00000016951) #22	WNT16 (ENSOPRG00000016946) #23	CPED1 (ENSOPRG00000016928) #24	ING3 (ENSOPRG00000016917) #25	TSPAN12 (ENSOPRG00000016911) #26	KCND2 (ENSOPRG00000016904) #27
Tree shrew	MODERN SPECIES	3623																FAM3C (ENSTBEG00000007361) #22	WNT16 (ENSTBEG00000006827) #23	CPED1 (ENSTBEG00000005141) #24	ING3 (ENSTBEG00000004313) #25
Primates	ANCESTRAL SPECIES	12	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Simiiformes	ANCESTRAL SPECIES	12	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Catarrhini	ANCESTRAL SPECIES	6	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #37
Hominoidea	ANCESTRAL SPECIES	6	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b.d #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #37
Hominidae	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b.d #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b.d #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #37
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b.d #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #37
Pan	ANCESTRAL SPECIES	13	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b.d #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT01100000263543.a.g.b.b.b.a.c.b.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00950000182802.A.a.a.e.b.b	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a
Bonobo	MODERN SPECIES	20	SPAM1 (ENSPPAG00000000072) #7	HYAL4 (ENSPPAG00000044144) #8	WASL (ENSPPAG00000036891) #10	LMOD2 (ENSPPAG00000034549) #11	ASB15 (ENSPPAG00000030252) #12	NDUFA5 (ENSPPAG00000043654) #13	IQUB (ENSPPAG00000036104) #14	SLC13A1 (ENSPPAG00000040216) #16	TAS2R16 (ENSPPAG00000000642)	ENSPPAG00000027242	CADPS2 (ENSPPAG00000029988) #17	FEZF1 (ENSPPAG00000027222) #19	AASS (ENSPPAG00000041360) #20	PTPRZ1 (ENSPPAG00000042542) #21	ENSPPAG00000042900	FAM3C (ENSPPAG00000037694) #22	WNT16 (ENSPPAG00000028372) #23	ENSPPAG00000032331	CPED1 (ENSPPAG00000036887) #24	ING3 (ENSPPAG00000029024) #25	TSPAN12 (ENSPPAG00000033647) #26	KCND2 (ENSPPAG00000034678) #27	ENSPPAG00000026407	ANKRD7 (ENSPPAG00000011992)	ENSPPAG00000043228 #30	CTTNBP2 (ENSPPAG00000032264) #31	CFTR (ENSPPAG00000040492) #33	ASZ1 (ENSPPAG00000041362) #34	WNT2 (ENSPPAG00000030407) #35	ST7 (ENSPPAG00000028019) #36	ENSPPAG00000042892
Chimpanzee	MODERN SPECIES	20	WASL (ENSPTRG00000019640) #10	LMOD2 (ENSPTRG00000019639) #11	ASB15 (ENSPTRG00000019638) #12	NDUFA5 (ENSPTRG00000019637) #13	IQUB (ENSPTRG00000019636) #14	SLC13A1 (ENSPTRG00000019635) #16	TAS2R16 (ENSPTRG00000019634)	ENSPTRG00000044019	CADPS2 (ENSPTRG00000019632) #17	FEZF1 (ENSPTRG00000019631) #19	ENSPTRG00000044831	AASS (ENSPTRG00000023614) #20	PTPRZ1 (ENSPTRG00000019629) #21	ENSPTRG00000045463	ENSPTRG00000043912	FAM3C (ENSPTRG00000022727) #22	WNT16 (ENSPTRG00000019627) #23	ENSPTRG00000044943	CPED1 (ENSPTRG00000019626) #24	ING3 (ENSPTRG00000019625) #25	TSPAN12 (ENSPTRG00000019624) #26	KCND2 (ENSPTRG00000047469) #27	ENSPTRG00000050664	ANKRD7 (ENSPTRG00000019622)	LSM8 (ENSPTRG00000046596) #30	CTTNBP2 (ENSPTRG00000019620) #31	CFTR (ENSPTRG00000019619) #33	ASZ1 (ENSPTRG00000019618) #34	WNT2 (ENSPTRG00000019617) #35	ST7 (ENSPTRG00000019616) #36	CAPZA2 (ENSPTRG00000019615) #37
Human	MODERN SPECIES	19	SPAM1 (ENSG00000106304) #7	HYAL4 (ENSG00000106302) #8	WASL (ENSG00000106299) #10	LMOD2 (ENSG00000170807) #11	ASB15 (ENSG00000146809) #12	NDUFA5 (ENSG00000128609) #13	IQUB (ENSG00000164675) #14	SLC13A1 (ENSG00000081800) #16	TAS2R16 (ENSG00000128519)	RNF148 (ENSG00000235631)	RNF133 (ENSG00000188050) #18	CADPS2 (ENSG00000081803) #17	FEZF1 (ENSG00000128610) #19	AASS (ENSG00000008311) #20	PTPRZ1 (ENSG00000106278) #21	FAM3C (ENSG00000196937) #22	WNT16 (ENSG00000002745) #23	CPED1 (ENSG00000106034) #24	ING3 (ENSG00000071243) #25	TSPAN12 (ENSG00000106025) #26	KCND2 (ENSG00000184408) #27	ANKRD7 (ENSG00000106013)	LSM8 (ENSG00000128534) #30	CTTNBP2 (ENSG00000077063) #31	ASZ1 (ENSG00000154438) #34	CFTR (ENSG00000001626) #33	WNT2 (ENSG00000105989) #35	ENSG00000288635	ST7 (ENSG00000004866) #36	CAPZA2 (ENSG00000198898) #37	MET (ENSG00000105976)
Gorilla	MODERN SPECIES	20	SSU72P8 (ENSGGOG00000027176)	TMEM229A (ENSGGOG00000026685)	SPAM1 (ENSGGOG00000006946) #7	HYAL4 (ENSGGOG00000006314) #8	WASL (ENSGGOG00000024699) #10	LMOD2 (ENSGGOG00000004684) #11	ASB15 (ENSGGOG00000008574) #12	NDUFA5 (ENSGGOG00000022922) #13	IQUB (ENSGGOG00000015921) #14	SLC13A1 (ENSGGOG00000006358) #16	TAS2R16 (ENSGGOG00000010354)	ENSGGOG00000042593	CADPS2 (ENSGGOG00000034978) #17	AASS (ENSGGOG00000027257) #20	PTPRZ1 (ENSGGOG00000023127) #21	FAM3C (ENSGGOG00000016446) #22	WNT16 (ENSGGOG00000016506) #23	CPED1 (ENSGGOG00000014223) #24	ING3 (ENSGGOG00000004349) #25	TSPAN12 (ENSGGOG00000034918) #26	KCND2 (ENSGGOG00000043715) #27	ENSGGOG00000039138	ANKRD7 (ENSGGOG00000025444)	LSM8 (ENSGGOG00000041883) #30	CTTNBP2 (ENSGGOG00000014941) #31	CFTR (ENSGGOG00000004019) #33	ASZ1 (ENSGGOG00000002659) #34	WNT2 (ENSGGOG00000009721) #35	ST7 (ENSGGOG00000014410) #36	ENSGGOG00000027365	CAPZA2 (ENSGGOG00000012158) #37
Orangutan	MODERN SPECIES	20	SPAM1 (ENSPPYG00000017961) #7	HYAL4 (ENSPPYG00000017960) #8	ENSPPYG00000032008 #9	WASL (ENSPPYG00000017959) #10	LMOD2 (ENSPPYG00000017958) #11	ASB15 (ENSPPYG00000017957) #12	NDUFA5 (ENSPPYG00000017956) #13	IQUB (ENSPPYG00000017955) #14	SLC13A1 (ENSPPYG00000017954) #16	TAS2R16 (ENSPPYG00000017953)	ENSPPYG00000038373	CADPS2 (ENSPPYG00000017952) #17	FEZF1 (ENSPPYG00000017951) #19	AASS (ENSPPYG00000017950) #20	PTPRZ1 (ENSPPYG00000017949) #21	FAM3C (ENSPPYG00000017948) #22	WNT16 (ENSPPYG00000017947) #23	CPED1 (ENSPPYG00000017946) #24	ING3 (ENSPPYG00000017945) #25	TSPAN12 (ENSPPYG00000017944) #26	KCND2 (ENSPPYG00000017943) #27	ANKRD7 (ENSPPYG00000018274)	LSM8 (ENSPPYG00000033700) #30	CTTNBP2 (ENSPPYG00000017941) #31	CFTR (ENSPPYG00000017940) #33	ASZ1 (ENSPPYG00000017939) #34	WNT2 (ENSPPYG00000017938) #35	ST7 (ENSPPYG00000017934) #36	CAPZA2 (ENSPPYG00000017933) #37	MET (ENSPPYG00000017932)	CAV1 (ENSPPYG00000017931)
Gibbon	MODERN SPECIES	3	ENSNLEG00000031959	TMEM229A (ENSNLEG00000018603)	SPAM1 (ENSNLEG00000012189) #7	HYAL4 (ENSNLEG00000012182) #8	WASL (ENSNLEG00000012159) #10	LMOD2 (ENSNLEG00000012153) #11	ASB15 (ENSNLEG00000012140) #12	NDUFA5 (ENSNLEG00000030214) #13	IQUB (ENSNLEG00000012115) #14	SLC13A1 (ENSNLEG00000012101) #16	ENSNLEG00000030675	CADPS2 (ENSNLEG00000012024) #17	ENSNLEG00000012020 #19	AASS (ENSNLEG00000011978) #20	PTPRZ1 (ENSNLEG00000011934) #21	FAM3C (ENSNLEG00000011915) #22	WNT16 (ENSNLEG00000011905) #23	CPED1 (ENSNLEG00000011852) #24	ING3 (ENSNLEG00000033180) #25	TSPAN12 (ENSNLEG00000011786) #26	KCND2 (ENSNLEG00000035189) #27	ANKRD7 (ENSNLEG00000011773)	LSM8 (ENSNLEG00000011768) #30	CTTNBP2 (ENSNLEG00000011717) #31	CFTR (ENSNLEG00000011680) #33	ASZ1 (ENSNLEG00000011649) #34	WNT2 (ENSNLEG00000011635) #35	ENSNLEG00000036065	ST7 (ENSNLEG00000011617) #36	ENSNLEG00000032514	ENSNLEG00000011604 #37
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #37
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212.`b #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #37
Vervet Monkey	MODERN SPECIES	13	SPAM1 (ENSCSAG00000010253) #7	HYAL4 (ENSCSAG00000010260) #8	WASL (ENSCSAG00000010265) #10	LMOD2 (ENSCSAG00000010272) #11	ASB15 (ENSCSAG00000010284) #12	NDUFA5 (ENSCSAG00000010289) #13	IQUB (ENSCSAG00000010294) #14	SLC13A1 (ENSCSAG00000010311) #16	TAS2R16 (ENSCSAG00000019134)	RNF148 (ENSCSAG00000019133)	RNF133 (ENSCSAG00000019132) #18	CADPS2 (ENSCSAG00000010492) #17	FEZF1 (ENSCSAG00000010570) #19	AASS (ENSCSAG00000010587) #20	PTPRZ1 (ENSCSAG00000010610) #21	FAM3C (ENSCSAG00000010624) #22	WNT16 (ENSCSAG00000010637) #23	CPED1 (ENSCSAG00000010728) #24	ING3 (ENSCSAG00000010764) #25	TSPAN12 (ENSCSAG00000010773) #26	KCND2 (ENSCSAG00000010780) #27	ANKRD7 (ENSCSAG00000010796)	ENSCSAG00000010802 #30	CTTNBP2 (ENSCSAG00000010811) #31	ENSCSAG00000010820 #33	ASZ1 (ENSCSAG00000010871) #34	WNT2 (ENSCSAG00000010887) #35	ENSCSAG00000010890	ST7 (ENSCSAG00000010897) #36	CAPZA2 (ENSCSAG00000010902) #37	MET (ENSCSAG00000010912)
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01010000223358	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212.`b #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a
Macaca	ANCESTRAL SPECIES	3	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01010000223358	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212.`b #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a
Pig-tailed macaque	MODERN SPECIES	95	GPR37 (ENSMNEG00000037150)	TMEM229A (ENSMNEG00000038128)	SPAM1 (ENSMNEG00000034544) #7	HYAL4 (ENSMNEG00000036511) #8	WASL (ENSMNEG00000035595) #10	LMOD2 (ENSMNEG00000031393) #11	ASB15 (ENSMNEG00000041583) #12	NDUFA5 (ENSMNEG00000039718) #13	IQUB (ENSMNEG00000032100) #14	SLC13A1 (ENSMNEG00000035147) #16	CADPS2 (ENSMNEG00000009908) #17	ENSMNEG00000037281	FEZF1 (ENSMNEG00000017416) #19	AASS (ENSMNEG00000031610) #20	PTPRZ1 (ENSMNEG00000038637) #21	FAM3C (ENSMNEG00000006860) #22	WNT16 (ENSMNEG00000037874) #23	CPED1 (ENSMNEG00000037782) #24	ING3 (ENSMNEG00000038183) #25	TSPAN12 (ENSMNEG00000034729) #26	KCND2 (ENSMNEG00000001242) #27	ENSMNEG00000038870	ENSMNEG00000007384	ANKRD7 (ENSMNEG00000029642)	ENSMNEG00000036764 #30	CTTNBP2 (ENSMNEG00000039935) #31	CFTR (ENSMNEG00000042569) #33	ASZ1 (ENSMNEG00000042319) #34	WNT2 (ENSMNEG00000035850) #35	ST7 (ENSMNEG00000043047) #36	ENSMNEG00000042576
Macaca_a	ANCESTRAL SPECIES	7	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000164704	ENSGT00730000111212.`b #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b.n.a #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Rhesus	MODERN SPECIES	13	HYAL4 (ENSMMUG00000005718) #8	ENSMMUG00000043306 #9	WASL (ENSMMUG00000011544) #10	ENSMMUG00000060087	LMOD2 (ENSMMUG00000011542) #11	ASB15 (ENSMMUG00000011541) #12	ENSMMUG00000063547	NDUFA5 (ENSMMUG00000017321) #13	IQUB (ENSMMUG00000011536) #14	SLC13A1 (ENSMMUG00000016770) #16	TAS2R16 (ENSMMUG00000064934)	CADPS2 (ENSMMUG00000021543) #17	FEZF1 (ENSMMUG00000021542) #19	AASS (ENSMMUG00000044304) #20	PTPRZ1 (ENSMMUG00000012418) #21	FAM3C (ENSMMUG00000002440) #22	WNT16 (ENSMMUG00000002439) #23	CPED1 (ENSMMUG00000002435) #24	ING3 (ENSMMUG00000002434) #25	TSPAN12 (ENSMMUG00000023310) #26	KCND2 (ENSMMUG00000023308) #27	ENSMMUG00000052979	ANKRD7 (ENSMMUG00000050524)	LSM8 (ENSMMUG00000060460) #30	CTTNBP2 (ENSMMUG00000010297) #31	ENSMMUG00000060895	CFTR (ENSMMUG00000011269) #33	ASZ1 (ENSMMUG00000021726) #34	ENSMMUG00000064285	WNT2 (ENSMMUG00000055123) #35	ST7 (ENSMMUG00000021722) #36
Crab-eating macaque	MODERN SPECIES	13	SPAM1 (ENSMFAG00000033680) #7	HYAL4 (ENSMFAG00000042410) #8	ENSMFAG00000060531 #9	WASL (ENSMFAG00000043459) #10	LMOD2 (ENSMFAG00000001768) #11	ASB15 (ENSMFAG00000042819) #12	NDUFA5 (ENSMFAG00000047182) #13	IQUB (ENSMFAG00000038536) #14	SLC13A1 (ENSMFAG00000030904) #16	TAS2R16 (ENSMFAG00000064959)	ENSMFAG00000041426	CADPS2 (ENSMFAG00000040292) #17	FEZF1 (ENSMFAG00000034053) #19	AASS (ENSMFAG00000038411) #20	PTPRZ1 (ENSMFAG00000032576) #21	FAM3C (ENSMFAG00000043181) #22	WNT16 (ENSMFAG00000031359) #23	CPED1 (ENSMFAG00000031588) #24	ING3 (ENSMFAG00000044425) #25	TSPAN12 (ENSMFAG00000002377) #26	KCND2 (ENSMFAG00000046158) #27	ANKRD7 (ENSMFAG00000039109)	LSM8 (ENSMFAG00000047892) #30	ENSMFAG00000056701	CTTNBP2 (ENSMFAG00000039255) #31	ENSMFAG00000053020	CFTR (ENSMFAG00000000170) #33	ASZ1 (ENSMFAG00000033937) #34	WNT2 (ENSMFAG00000044147) #35	ST7 (ENSMFAG00000008568) #36	CAPZA2 (ENSMFAG00000041237) #37
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01010000223358	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212.`b #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a
Olive baboon	MODERN SPECIES	14	NDUFA5 (ENSPANG00000041983) #13	IQUB (ENSPANG00000011913) #14	SLC13A1 (ENSPANG00000016311) #16	TAS2R16 (ENSPANG00000041912)	ENSPANG00000041228	ENSPANG00000040239	CADPS2 (ENSPANG00000016310) #17	ENSPANG00000030233	FEZF1 (ENSPANG00000013797) #19	AASS (ENSPANG00000015986) #20	PTPRZ1 (ENSPANG00000019044) #21	ENSPANG00000040908	ENSPANG00000045443	ENSPANG00000038082	ENSPANG00000044216	FAM3C (ENSPANG00000006062) #22	WNT16 (ENSPANG00000025364) #23	CPED1 (ENSPANG00000016466) #24	ING3 (ENSPANG00000018195) #25	TSPAN12 (ENSPANG00000032965) #26	KCND2 (ENSPANG00000032534) #27	ENSPANG00000045599	ANKRD7 (ENSPANG00000016259)	ENSPANG00000039754 #30	CTTNBP2 (ENSPANG00000007108) #31	CFTR (ENSPANG00000015987) #33	ASZ1 (ENSPANG00000016260) #34	WNT2 (ENSPANG00000048086) #35	ST7 (ENSPANG00000020407) #36	CAPZA2 (ENSPANG00000024714) #37	MET (ENSPANG00000024383)
Cercopithecinae_d	ANCESTRAL SPECIES	24	ENSGT01100000263518.B.b.b	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01010000223358	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212.`b #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT01030000234542.b.a.a.a.b.a.a.a.a
Drill	MODERN SPECIES	1191	ENSMLEG00000036864	GPR37 (ENSMLEG00000005601)	SPAM1 (ENSMLEG00000043945) #7	HYAL4 (ENSMLEG00000041426) #8	WASL (ENSMLEG00000038405) #10	LMOD2 (ENSMLEG00000032109) #11	ASB15 (ENSMLEG00000030309) #12	NDUFA5 (ENSMLEG00000034267) #13	IQUB (ENSMLEG00000005762) #14	SLC13A1 (ENSMLEG00000031772) #16	CADPS2 (ENSMLEG00000043425) #17	ENSMLEG00000040871	FEZF1 (ENSMLEG00000034221) #19	AASS (ENSMLEG00000027988) #20	PTPRZ1 (ENSMLEG00000032043) #21	FAM3C (ENSMLEG00000040302) #22	WNT16 (ENSMLEG00000040367) #23	CPED1 (ENSMLEG00000034961) #24	ING3 (ENSMLEG00000041000) #25	TSPAN12 (ENSMLEG00000036367) #26	KCND2 (ENSMLEG00000031627) #27	ENSMLEG00000043878	ENSMLEG00000025917
Sooty mangabey	MODERN SPECIES	283	GPR37 (ENSCATG00000044004)	TMEM229A (ENSCATG00000015411)	SPAM1 (ENSCATG00000033464) #7	HYAL4 (ENSCATG00000037698) #8	WASL (ENSCATG00000039720) #10	LMOD2 (ENSCATG00000032642) #11	ASB15 (ENSCATG00000040240) #12	NDUFA5 (ENSCATG00000034799) #13	IQUB (ENSCATG00000042016) #14	SLC13A1 (ENSCATG00000044783) #16	ENSCATG00000041130	CADPS2 (ENSCATG00000017941) #17	FEZF1 (ENSCATG00000037503) #19	AASS (ENSCATG00000024168) #20	PTPRZ1 (ENSCATG00000042812) #21	FAM3C (ENSCATG00000033663) #22	WNT16 (ENSCATG00000042098) #23	CPED1 (ENSCATG00000034268) #24	ING3 (ENSCATG00000037947) #25	TSPAN12 (ENSCATG00000032384) #26	ENSCATG00000013909	KCND2 (ENSCATG00000034255) #27	ENSCATG00000014280	ANKRD7 (ENSCATG00000005822)	LSM8 (ENSCATG00000045302) #30	CTTNBP2 (ENSCATG00000043370) #31	CFTR (ENSCATG00000045275) #33	ASZ1 (ENSCATG00000034312) #34	WNT2 (ENSCATG00000040118) #35	ENSCATG00000034007	ST7 (ENSCATG00000044990) #36
Rhinopithecus	ANCESTRAL SPECIES	474											ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT01010000223358
Golden snub-nosed monkey	MODERN SPECIES	2344																FAM3C (ENSRROG00000037673) #22	WNT16 (ENSRROG00000032286) #23	CPED1 (ENSRROG00000031735) #24	ING3 (ENSRROG00000029742) #25	TSPAN12 (ENSRROG00000031070) #26	ENSRROG00000041880	ENSRROG00000042515
Black snub-nosed monkey	MODERN SPECIES	1867											ENSRBIG00000035158	CADPS2 (ENSRBIG00000031880) #17	FEZF1 (ENSRBIG00000040834) #19	AASS (ENSRBIG00000019142) #20	PTPRZ1 (ENSRBIG00000034085) #21	FAM3C (ENSRBIG00000031022) #22	WNT16 (ENSRBIG00000036143) #23	CPED1 (ENSRBIG00000038791) #24	ING3 (ENSRBIG00000039191) #25	TSPAN12 (ENSRBIG00000035868) #26	ENSRBIG00000043136
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b.a.a #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Cebidae	ANCESTRAL SPECIES	9	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b.a.a.b.b #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT01100000263518.B.b.b	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.w.b.a.a.a #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000164704	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Capuchin	MODERN SPECIES	507														ENSCCAG00000028006 #20	PTPRZ1 (ENSCCAG00000028952) #21	FAM3C (ENSCCAG00000020415) #22	WNT16 (ENSCCAG00000035470) #23	CPED1 (ENSCCAG00000029032) #24	ING3 (ENSCCAG00000034540) #25	TSPAN12 (ENSCCAG00000021555) #26
Bolivian squirrel monkey	MODERN SPECIES	44	SPAM1 (ENSSBOG00000028163) #7	HYAL4 (ENSSBOG00000033118) #8	WASL (ENSSBOG00000035327) #10	LMOD2 (ENSSBOG00000034553) #11	ASB15 (ENSSBOG00000029369) #12	ENSSBOG00000021818 #13	ENSSBOG00000035298	IQUB (ENSSBOG00000035531) #14	SLC13A1 (ENSSBOG00000023645) #16	CADPS2 (ENSSBOG00000027008) #17	ENSSBOG00000030358	FEZF1 (ENSSBOG00000024490) #19	AASS (ENSSBOG00000023976) #20	PTPRZ1 (ENSSBOG00000031204) #21	ENSSBOG00000023808	FAM3C (ENSSBOG00000035343) #22	WNT16 (ENSSBOG00000028903) #23	CPED1 (ENSSBOG00000030761) #24	ING3 (ENSSBOG00000032892) #25	TSPAN12 (ENSSBOG00000018467) #26	KCND2 (ENSSBOG00000020186) #27	ENSSBOG00000018270	ANKRD7 (ENSSBOG00000021785)	LSM8 (ENSSBOG00000023223) #30	CTTNBP2 (ENSSBOG00000032674) #31	CFTR (ENSSBOG00000034493) #33	ASZ1 (ENSSBOG00000014420) #34	WNT2 (ENSSBOG00000026115) #35	ST7 (ENSSBOG00000031136) #36	CAPZA2 (ENSSBOG00000026180) #37	ENSSBOG00000033214
Marmoset	MODERN SPECIES	20	SPAM1 (ENSCJAG00000017536) #7	HYAL4 (ENSCJAG00000017533) #8	WASL (ENSCJAG00000038944) #10	LMOD2 (ENSCJAG00000017483) #11	ASB15 (ENSCJAG00000017456) #12	ENSCJAG00000083655 #13	IQUB (ENSCJAG00000017429) #14	ENSCJAG00000080491	SLC13A1 (ENSCJAG00000044845) #16	TAS2R16 (ENSCJAG00000021941)	CADPS2 (ENSCJAG00000017339) #17	FEZF1 (ENSCJAG00000017326) #19	AASS (ENSCJAG00000017282) #20	PTPRZ1 (ENSCJAG00000017225) #21	ENSCJAG00000074556	FAM3C (ENSCJAG00000017203) #22	WNT16 (ENSCJAG00000039822) #23	CPED1 (ENSCJAG00000017180) #24	ING3 (ENSCJAG00000017145) #25	ENSCJAG00000046997	TSPAN12 (ENSCJAG00000017120) #26	KCND2 (ENSCJAG00000022123) #27	ENSCJAG00000073110	ENSCJAG00000085674	ENSCJAG00000082231	ENSCJAG00000073402	ENSCJAG00000087352
Mas night monkey	MODERN SPECIES	299	SPAM1 (ENSANAG00000027369) #7	HYAL4 (ENSANAG00000024876) #8	WASL (ENSANAG00000002693) #10	LMOD2 (ENSANAG00000037267) #11	ASB15 (ENSANAG00000036619) #12	ENSANAG00000033278 #13	IQUB (ENSANAG00000031863) #14	SLC13A1 (ENSANAG00000023737) #16	ENSANAG00000032957	CADPS2 (ENSANAG00000033191) #17	FEZF1 (ENSANAG00000036057) #19	AASS (ENSANAG00000037715) #20	ENSANAG00000027824	PTPRZ1 (ENSANAG00000032819) #21	ENSANAG00000017679	FAM3C (ENSANAG00000027693) #22	WNT16 (ENSANAG00000032514) #23	CPED1 (ENSANAG00000037145) #24	ING3 (ENSANAG00000026555) #25	TSPAN12 (ENSANAG00000026533) #26	KCND2 (ENSANAG00000019515) #27	ENSANAG00000018557
Tarsier	MODERN SPECIES	5463												CADPS2 (ENSTSYG00000002698) #17	FEZF1 (ENSTSYG00000033563) #19	AASS (ENSTSYG00000002866) #20	PTPRZ1 (ENSTSYG00000002863) #21	FAM3C (ENSTSYG00000010213) #22	WNT16 (ENSTSYG00000010211) #23	CPED1 (ENSTSYG00000010166) #24	ING3 (ENSTSYG00000000136) #25
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT01020000230364.a.a.b.a.n #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT01020000230364.a.b #9	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.u.a #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212.bb #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Mouse lemur	MODERN SPECIES	2	TMEM229A (ENSMICG00000029802)	HYAL4 (ENSMICG00000030714) #8	WASL (ENSMICG00000038346) #10	LMOD2 (ENSMICG00000032173) #11	ASB15 (ENSMICG00000005290) #12	NDUFA5 (ENSMICG00000032578) #13	IQUB (ENSMICG00000008091) #14	SLC13A1 (ENSMICG00000030478) #16	CADPS2 (ENSMICG00000001954) #17	ENSMICG00000034262	FEZF1 (ENSMICG00000033586) #19	AASS (ENSMICG00000000617) #20	PTPRZ1 (ENSMICG00000000608) #21	ENSMICG00000030043	ENSMICG00000026612	FAM3C (ENSMICG00000034347) #22	WNT16 (ENSMICG00000013963) #23	CPED1 (ENSMICG00000036835) #24	ENSMICG00000013934 #25	TSPAN12 (ENSMICG00000000958) #26	KCND2 (ENSMICG00000043428) #27	ENSMICG00000048064	ENSMICG00000036567 #29	LSM8 (ENSMICG00000042730) #30	CTTNBP2 (ENSMICG00000005787) #31	CFTR (ENSMICG00000046039) #33	ASZ1 (ENSMICG00000005752) #34	WNT2 (ENSMICG00000005749) #35	ST7 (ENSMICG00000005741) #36	CAPZA2 (ENSMICG00000032607) #37	MET (ENSMICG00000000697)
Lemuriformes_a	ANCESTRAL SPECIES	103	ENSGT01020000230364.a.b #9	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.u.a #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212.bb #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Coquerels sifaka	MODERN SPECIES	544	SPAM1 (ENSPCOG00000000864) #7	ENSPCOG00000021492	HYAL4 (ENSPCOG00000024997) #8	WASL (ENSPCOG00000024447) #10	LMOD2 (ENSPCOG00000017932) #11	ASB15 (ENSPCOG00000011820) #12	ENSPCOG00000016990 #13	IQUB (ENSPCOG00000016916) #14	ENSPCOG00000013869 #16	CADPS2 (ENSPCOG00000028725) #17	ENSPCOG00000007052	FEZF1 (ENSPCOG00000021658) #19	AASS (ENSPCOG00000027625) #20	PTPRZ1 (ENSPCOG00000025981) #21	ENSPCOG00000025054	FAM3C (ENSPCOG00000019661) #22	WNT16 (ENSPCOG00000015467) #23	CPED1 (ENSPCOG00000016564) #24	ENSPCOG00000028787	TSPAN12 (ENSPCOG00000021720) #26	KCND2 (ENSPCOG00000015891) #27	ENSPCOG00000017095	ENSPCOG00000003309 #30	CTTNBP2 (ENSPCOG00000000372) #31	CFTR (ENSPCOG00000014929) #33	ASZ1 (ENSPCOG00000018076) #34	WNT2 (ENSPCOG00000027908) #35	ST7 (ENSPCOG00000008893) #36	CAPZA2 (ENSPCOG00000021478) #37	MET (ENSPCOG00000022991)	CAV1 (ENSPCOG00000024742)
Greater bamboo lemur	MODERN SPECIES	654					WASL (ENSPSMG00000013667) #10	ENSPSMG00000013679 #11	ASB15 (ENSPSMG00000013726) #12	ENSPSMG00000013790 #13	IQUB (ENSPSMG00000013811) #14	SLC13A1 (ENSPSMG00000013858) #16	TAS2R16 (ENSPSMG00000013871)	CADPS2 (ENSPSMG00000014152) #17	FEZF1 (ENSPSMG00000014374) #19	AASS (ENSPSMG00000014416) #20	PTPRZ1 (ENSPSMG00000014542) #21	FAM3C (ENSPSMG00000014578) #22	WNT16 (ENSPSMG00000014604) #23	CPED1 (ENSPSMG00000014697) #24	ING3 (ENSPSMG00000014755) #25	TSPAN12 (ENSPSMG00000014789) #26	KCND2 (ENSPSMG00000014803) #27	ENSPSMG00000014820	ENSPSMG00000014837 #29	ENSPSMG00000014842 #30	CTTNBP2 (ENSPSMG00000014929) #31	ENSPSMG00000014944	CFTR (ENSPSMG00000015055) #33	ASZ1 (ENSPSMG00000015104) #34	WNT2 (ENSPSMG00000015124) #35	ST7 (ENSPSMG00000015388) #36	CAPZA2 (ENSPSMG00000015591) #37
Bushbaby	MODERN SPECIES	152	ENSOGAG00000027679 #7	HYAL4 (ENSOGAG00000009563) #8	WASL (ENSOGAG00000007616) #10	ENSOGAG00000025472	LMOD2 (ENSOGAG00000032855) #11	ASB15 (ENSOGAG00000007610) #12	NDUFA5 (ENSOGAG00000033137) #13	IQUB (ENSOGAG00000001073) #14	SLC13A1 (ENSOGAG00000011883) #16	RNF148 (ENSOGAG00000032042)	RNF133 (ENSOGAG00000002671) #18	CADPS2 (ENSOGAG00000002665) #17	FEZF1 (ENSOGAG00000002663) #19	AASS (ENSOGAG00000016086) #20	PTPRZ1 (ENSOGAG00000016074) #21	FAM3C (ENSOGAG00000004219) #22	WNT16 (ENSOGAG00000004218) #23	CPED1 (ENSOGAG00000004213) #24	ING3 (ENSOGAG00000004212) #25	TSPAN12 (ENSOGAG00000004209) #26	KCND2 (ENSOGAG00000031295) #27	ENSOGAG00000027459	ENSOGAG00000025182	ENSOGAG00000006943	LSM8 (ENSOGAG00000013377) #30	CTTNBP2 (ENSOGAG00000001760) #31	CFTR (ENSOGAG00000001756) #33	ASZ1 (ENSOGAG00000003040) #34	WNT2 (ENSOGAG00000013574) #35	ST7 (ENSOGAG00000013563) #36	CAPZA2 (ENSOGAG00000012540) #37
Laurasiatheria	ANCESTRAL SPECIES	21	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Carnivora	ANCESTRAL SPECIES	15	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000163928 #18	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00390000007479.y.b	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37
Caniformia	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00390000007479.y.b	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT01100000263518.B.b.b	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000153661.b.b.m	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00390000007479.y.b.a	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36
Ursidae	ANCESTRAL SPECIES	12	ENSGT01100000263518.B.b.b	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a.h #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT01010000229956	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00490000043329.a.a.a.pb.c.b	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36
Ursus	ANCESTRAL SPECIES	82	ENSGT00390000018285	ENSGT01100000263518.B.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a.h #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00490000043329.a.a.a.pb.c.b	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293.i #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Polar bear	MODERN SPECIES	281	POT1 (ENSUMAG00000005740)	GPR37 (ENSUMAG00000005723)	SPAM1 (ENSUMAG00000005678) #7	HYAL4 (ENSUMAG00000005668) #8	ENSUMAG00000005628 #9	WASL (ENSUMAG00000005599) #10	LMOD2 (ENSUMAG00000005592) #11	ASB15 (ENSUMAG00000005569) #12	ENSUMAG00000005561 #13	IQUB (ENSUMAG00000005549) #14	ENSUMAG00000005539 #16	CADPS2 (ENSUMAG00000004849) #17	FEZF1 (ENSUMAG00000004731) #19	AASS (ENSUMAG00000003535) #20	PTPRZ1 (ENSUMAG00000003260) #21	FAM3C (ENSUMAG00000003239) #22	WNT16 (ENSUMAG00000003225) #23	CPED1 (ENSUMAG00000003165) #24	ING3 (ENSUMAG00000003142) #25	TSPAN12 (ENSUMAG00000003123) #26	ENSUMAG00000003110	ENSUMAG00000003108	ENSUMAG00000003079 #29	LSM8 (ENSUMAG00000003073) #30	CTTNBP2 (ENSUMAG00000003029) #31	CFTR (ENSUMAG00000003001) #33	ASZ1 (ENSUMAG00000002973) #34	WNT2 (ENSUMAG00000002965) #35	ST7 (ENSUMAG00000002912) #36	CAPZA2 (ENSUMAG00000002886) #37	MET (ENSUMAG00000002307)
American black bear	MODERN SPECIES	4003																FAM3C (ENSUAMG00000017362) #22	WNT16 (ENSUAMG00000017360) #23	CPED1 (ENSUAMG00000017357) #24
Giant Panda	MODERN SPECIES		GPR37 (ENSAMEG00000015050)	TMEM229A (ENSAMEG00000028267)	SPAM1 (ENSAMEG00000004578) #7	HYAL4 (ENSAMEG00000004577) #8	ENSAMEG00000004569 #9	WASL (ENSAMEG00000004549) #10	ENSAMEG00000023643 #11	ASB15 (ENSAMEG00000004517) #12	NDUFA5 (ENSAMEG00000004512) #13	IQUB (ENSAMEG00000004491) #14	SLC13A1 (ENSAMEG00000004466) #16	CADPS2 (ENSAMEG00000004390) #17	FEZF1 (ENSAMEG00000004386) #19	AASS (ENSAMEG00000004321) #20	PTPRZ1 (ENSAMEG00000004272) #21	FAM3C (ENSAMEG00000006035) #22	WNT16 (ENSAMEG00000006022) #23	CPED1 (ENSAMEG00000006006) #24	ING3 (ENSAMEG00000005975) #25	TSPAN12 (ENSAMEG00000005955) #26	ENSAMEG00000029289	KCND2 (ENSAMEG00000020256) #27	ENSAMEG00000031336	ENSAMEG00000027977	ENSAMEG00000001159 #29	LSM8 (ENSAMEG00000001162) #30	CTTNBP2 (ENSAMEG00000001163) #31	CFTR (ENSAMEG00000001184) #33	ASZ1 (ENSAMEG00000001244) #34	WNT2 (ENSAMEG00000001256) #35	ST7 (ENSAMEG00000001267) #36
Mustelinae	ANCESTRAL SPECIES	9	ENSGT01100000263518.B.b.b	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000153661.b.b.m	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00390000007479.y.b.a	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36
Ferret	MODERN SPECIES	168	TMEM229A (ENSMPUG00000018743)	SPAM1 (ENSMPUG00000006764) #7	HYAL4 (ENSMPUG00000006771) #8	ENSMPUG00000006776 #9	WASL (ENSMPUG00000006781) #10	LMOD2 (ENSMPUG00000006791) #11	ASB15 (ENSMPUG00000006795) #12	ENSMPUG00000006805	NDUFA5 (ENSMPUG00000006811) #13	IQUB (ENSMPUG00000006817) #14	SLC13A1 (ENSMPUG00000006826) #16	CADPS2 (ENSMPUG00000006834) #17	FEZF1 (ENSMPUG00000006851) #19	AASS (ENSMPUG00000006862) #20	PTPRZ1 (ENSMPUG00000006874) #21	FAM3C (ENSMPUG00000006897) #22	WNT16 (ENSMPUG00000006909) #23	CPED1 (ENSMPUG00000006988) #24	ING3 (ENSMPUG00000007054) #25	TSPAN12 (ENSMPUG00000007059) #26	ENSMPUG00000007063	KCND2 (ENSMPUG00000007070) #27	ENSMPUG00000007078	ENSMPUG00000007093	ENSMPUG00000007100 #30	ENSMPUG00000007110	CTTNBP2 (ENSMPUG00000007124) #31	CFTR (ENSMPUG00000007138) #33	ASZ1 (ENSMPUG00000007155) #34	WNT2 (ENSMPUG00000007172) #35	ST7 (ENSMPUG00000007184) #36
American mink	MODERN SPECIES	3	TMEM229A (ENSNVIG00000000699)	SPAM1 (ENSNVIG00000000705) #7	HYAL4 (ENSNVIG00000000849) #8	ENSNVIG00000000869 #9	WASL (ENSNVIG00000001022) #10	LMOD2 (ENSNVIG00000001035) #11	ASB15 (ENSNVIG00000001045) #12	NDUFA5 (ENSNVIG00000001143) #13	IQUB (ENSNVIG00000001202) #14	SLC13A1 (ENSNVIG00000001237) #16	CADPS2 (ENSNVIG00000001278) #17	ENSNVIG00000001541	FEZF1 (ENSNVIG00000001557) #19	AASS (ENSNVIG00000001583) #20	PTPRZ1 (ENSNVIG00000001621) #21	FAM3C (ENSNVIG00000001700) #22	WNT16 (ENSNVIG00000001731) #23	CPED1 (ENSNVIG00000001760) #24	ING3 (ENSNVIG00000001859) #25	TSN12 (ENSNVIG00000001909) #26	KCND2 (ENSNVIG00000001932) #27	ENSNVIG00000001954	ENSNVIG00000001960 #29	LSM8 (ENSNVIG00000001976) #30	CTTNBP2 (ENSNVIG00000002011) #31	CFTR (ENSNVIG00000002052) #33	ASZ1 (ENSNVIG00000002205) #34	WNT2 (ENSNVIG00000002216) #35	ST7 (ENSNVIG00000002263) #36	CAPZA2 (ENSNVIG00000002498) #37	ENSNVIG00000002532
Canidae	ANCESTRAL SPECIES	22								ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022.a	ENSGT00950000183006.B.f.b.a	ENSGT00950000183006.A.b
Canis_lupus	ANCESTRAL SPECIES	24								ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216.q.a #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212.q.b #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022.a	ENSGT00950000183006.B.f.b.a
Dog	MODERN SPECIES	5											ENSCAFG00845015049 #14	SLC13A1 (ENSCAFG00845014948) #16	CADPS2 (ENSCAFG00845014715) #17	AASS (ENSCAFG00845014560) #20	PTPRZ1 (ENSCAFG00845012086) #21	FAM3C (ENSCAFG00845010960) #22	WNT16 (ENSCAFG00845010924) #23	CPED1 (ENSCAFG00845010739) #24	ING3 (ENSCAFG00845010632) #25	TSPAN12 (ENSCAFG00845010513) #26	ENSCAFG00845010446 #27	ENSCAFG00845010332 #29	ENSCAFG00845010283 #30	CFTR (ENSCAFG00845009171) #33	ASZ1 (ENSCAFG00845008921) #34	WNT2 (ENSCAFG00845008849) #35	ST7 (ENSCAFG00845008329) #36	CAPZA2 (ENSCAFG00845007934) #37	MET (ENSCAFG00845007244)	CAV1 (ENSCAFG00845006847)	CAV2 (ENSCAFG00845006745)
Dingo	MODERN SPECIES	180							IQUB (ENSCAFG00020026130) #14	SLC13A1 (ENSCAFG00020026135) #16	CADPS2 (ENSCAFG00020026141) #17	RNF148 (ENSCAFG00020000101)	RNF133 (ENSCAFG00020000122) #18	FEZF1 (ENSCAFG00020000140) #19	AASS (ENSCAFG00020000347) #20	ENSCAFG00020001699 #21	ENSCAFG00020001960	FAM3C (ENSCAFG00020001978) #22	WNT16 (ENSCAFG00020001982) #23	ENSCAFG00020002041 #24
Red fox	MODERN SPECIES	235											CADPS2 (ENSVVUG00000011725) #17	RNF133 (ENSVVUG00000011814) #18	FEZF1 (ENSVVUG00000011821) #19	AASS (ENSVVUG00000011904) #20	PTPRZ1 (ENSVVUG00000016293) #21	FAM3C (ENSVVUG00000017209) #22	WNT16 (ENSVVUG00000017214) #23	CPED1 (ENSVVUG00000017225) #24	ING3 (ENSVVUG00000017242) #25	TSPAN12 (ENSVVUG00000017249) #26
Felidae	ANCESTRAL SPECIES	13	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.gb.a #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00390000015224.c.b.b.a.b.a	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00390000007479.y.b	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36
Panthera	ANCESTRAL SPECIES	1	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.gb.a #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00390000015224.c.b.b.a.b.a	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00900000143058	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.gb.a #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00390000015224.c.b.b.a.b.a	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00900000143058	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36
leopard	MODERN SPECIES	23	SPAM1 (ENSPPRG00000005615) #7	HYAL4 (ENSPPRG00000005672) #8	ENSPPRG00000005738 #9	WASL (ENSPPRG00000005769) #10	LMOD2 (ENSPPRG00000005815) #11	ASB15 (ENSPPRG00000005862) #12	ENSPPRG00000006159 #13	IQUB (ENSPPRG00000006201) #14	SLC13A1 (ENSPPRG00000006256) #16	ENSPPRG00000006309	CADPS2 (ENSPPRG00000006851) #17	FEZF1 (ENSPPRG00000006922) #19	AASS (ENSPPRG00000007468) #20	ENSPPRG00000019933	PTPRZ1 (ENSPPRG00000007906) #21	FAM3C (ENSPPRG00000008287) #22	WNT16 (ENSPPRG00000008351) #23	CPED1 (ENSPPRG00000008429) #24	ING3 (ENSPPRG00000008514) #25	TSPAN12 (ENSPPRG00000008555) #26	KCND2 (ENSPPRG00000008572) #27	ENSPPRG00000019953	ENSPPRG00000019972
lion	MODERN SPECIES	2	GPR37 (ENSPLOG00000006731)	TMEM229A (ENSPLOG00000006721)	SPAM1 (ENSPLOG00000006697) #7	HYAL4 (ENSPLOG00000006677) #8	ENSPLOG00000006559 #9	WASL (ENSPLOG00000006519) #10	ENSPLOG00000006488 #11	ASB15 (ENSPLOG00000006438) #12	NDUFA5 (ENSPLOG00000006357) #13	ENSPLOG00000006309 #14	SLC13A1 (ENSPLOG00000006227) #16	CADPS2 (ENSPLOG00000005636) #17	FEZF1 (ENSPLOG00000005395) #19	AASS (ENSPLOG00000005333) #20	PTPRZ1 (ENSPLOG00000004914) #21	FAM3C (ENSPLOG00000004694) #22	WNT16 (ENSPLOG00000004662) #23	CPED1 (ENSPLOG00000004600) #24	ING3 (ENSPLOG00000004574) #25	TSPAN12 (ENSPLOG00000004557) #26	KCND2 (ENSPLOG00000004548) #27	ENSPLOG00000004539	ENSPLOG00000004535	ENSPLOG00000004527 #29	LSM8 (ENSPLOG00000004510) #30	CTTNBP2 (ENSPLOG00000004483) #31	CFTR (ENSPLOG00000004296) #33	ASZ1 (ENSPLOG00000004231) #34	WNT2 (ENSPLOG00000004225) #35	ST7 (ENSPLOG00000003747) #36	CAPZA2 (ENSPLOG00000003487) #37
Tiger	MODERN SPECIES	296	GPR37 (ENSPTIG00000010927)	SPAM1 (ENSPTIG00000008304) #7	HYAL4 (ENSPTIG00000007896) #8	ENSPTIG00000007055 #9	WASL (ENSPTIG00000003364) #10	LMOD2 (ENSPTIG00000021981) #11	ASB15 (ENSPTIG00000021697) #12	NDUFA5 (ENSPTIG00000021225) #13	IQUB (ENSPTIG00000020106) #14	SLC13A1 (ENSPTIG00000019436) #16	ENSPTIG00000019227	CADPS2 (ENSPTIG00000008072) #17	FEZF1 (ENSPTIG00000006097) #19	AASS (ENSPTIG00000020365) #20	PTPRZ1 (ENSPTIG00000014785) #21	FAM3C (ENSPTIG00000014410) #22	WNT16 (ENSPTIG00000013116) #23	CPED1 (ENSPTIG00000010438) #24	ING3 (ENSPTIG00000008202) #25	TSPAN12 (ENSPTIG00000007270) #26	KCND2 (ENSPTIG00000006572) #27	ENSPTIG00000005580 #29	LSM8 (ENSPTIG00000004722) #30	CTTNBP2 (ENSPTIG00000019650) #31	ENSPTIG00000017786	CFTR (ENSPTIG00000017030) #33	ASZ1 (ENSPTIG00000014931) #34	WNT2 (ENSPTIG00000014444) #35	ST7 (ENSPTIG00000022098) #36	CAPZA2 (ENSPTIG00000022058) #37	ENSPTIG00000002142
Cat	MODERN SPECIES	1	GPR37 (ENSFCAG00000036887)	TMEM229A (ENSFCAG00000041248)	SPAM1 (ENSFCAG00000010407) #7	HYAL4 (ENSFCAG00000010550) #8	WASL (ENSFCAG00000010127) #10	ASB15 (ENSFCAG00000004489) #11	NDUFA5 (ENSFCAG00000039291) #13	IQUB (ENSFCAG00000008476) #14	SLC13A1 (ENSFCAG00000013589) #16	CADPS2 (ENSFCAG00000000574) #17	FEZF1 (ENSFCAG00000013521) #19	AASS (ENSFCAG00000029895) #20	PTPRZ1 (ENSFCAG00000015760) #21	ENSFCAG00000030800	WNT16 (ENSFCAG00000029148) #23	FAM3C (ENSFCAG00000023087) #22	CPED1 (ENSFCAG00000023648) #24	ING3 (ENSFCAG00000029472) #25	TSPAN12 (ENSFCAG00000023943) #26	KCND2 (ENSFCAG00000007877) #27	ENSFCAG00000038564	ENSFCAG00000047748	ENSFCAG00000031973 #29	LSM8 (ENSFCAG00000036620) #30	ENSFCAG00000032304	CTTNBP2 (ENSFCAG00000014956) #31	CFTR (ENSFCAG00000014955) #33	ASZ1 (ENSFCAG00000023842) #34	WNT2 (ENSFCAG00000036421) #35	ST7 (ENSFCAG00000013253) #36	CAPZA2 (ENSFCAG00000027103) #37
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Equus	ANCESTRAL SPECIES	13	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Horse	DUPLICATION
Horse	MODERN SPECIES	336																ENSECAG00000034839 #22
Horse	MODERN SPECIES	25	GPR37 (ENSECAG00000008565)	TMEM229A (ENSECAG00000049752)	SPAM1 (ENSECAG00000006212) #7	HYAL4 (ENSECAG00000024782) #8	ENSECAG00000023576 #9	WASL (ENSECAG00000015578) #10	LMOD2 (ENSECAG00000057098) #11	ASB15 (ENSECAG00000011379) #12	IQUB (ENSECAG00000005249) #14	SLC13A1 (ENSECAG00000020615) #16	CADPS2 (ENSECAG00000024021) #17	FEZF1 (ENSECAG00000022989) #19	AASS (ENSECAG00000021479) #20	PTPRZ1 (ENSECAG00000011293) #21	WNT16 (ENSECAG00000006880) #23	FAM3C (ENSECAG00000008527) #22	CPED1 (ENSECAG00000017094) #24	ING3 (ENSECAG00000008147) #25	TSPAN12 (ENSECAG00000001545) #26	KCND2 (ENSECAG00000002703) #27	LSM8 (ENSECAG00000024025) #30	CTTNBP2 (ENSECAG00000025076) #31	CFTR (ENSECAG00000009139) #33	ASZ1 (ENSECAG00000011002) #34	ENSECAG00000043879	WNT2 (ENSECAG00000024641) #35	ENSECAG00000059035	ST7 (ENSECAG00000008375) #36	CAPZA2 (ENSECAG00000021693) #37	MET (ENSECAG00000010385)	CAV1 (ENSECAG00000009134)
Donkey	MODERN SPECIES		TMEM229A (ENSEASG00005008480)	ENSEASG00005025329 #7	HYAL4 (ENSEASG00005009393) #8	ENSEASG00005009367 #9	WASL (ENSEASG00005009349) #10	LMOD2 (ENSEASG00005035591) #11	ASB15 (ENSEASG00005009342) #12	NDUFA5 (ENSEASG00005009337) #13	IQUB (ENSEASG00005009328) #14	SLC13A1 (ENSEASG00005009316) #16	TAS2R16 (ENSEASG00005009304)	CADPS2 (ENSEASG00005009041) #17	FEZF1 (ENSEASG00005009026) #19	AASS (ENSEASG00005009016) #20	PTPRZ1 (ENSEASG00005008993) #21	FAM3C (ENSEASG00005008980) #22	WNT16 (ENSEASG00005008977) #23	ENSEASG00005008958 #24	ENSEASG00005028595 #24	ING3 (ENSEASG00005008942) #25	TSPAN12 (ENSEASG00005008941) #26	KCND2 (ENSEASG00005008938) #27	ENSEASG00005008937	LSM8 (ENSEASG00005027658) #30	CTTNBP2 (ENSEASG00005008929) #31	CFTR (ENSEASG00005008909) #33	ASZ1 (ENSEASG00005008894) #34	WNT2 (ENSEASG00005008889) #35	ST7 (ENSEASG00005008859) #36	CAPZA2 (ENSEASG00005008845) #37	MET (ENSEASG00005008840)
Chiroptera	ANCESTRAL SPECIES	41	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Megabat	MODERN SPECIES	1																FAM3C (ENSPVAG00000013933) #22	WNT16 (ENSPVAG00000013932) #23
Microchiroptera	ANCESTRAL SPECIES	23	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Greater horseshoe bat	MODERN SPECIES	18	TMEM229A (ENSRFEG00010014794)	SPAM1 (ENSRFEG00010014812) #7	HYAL4 (ENSRFEG00010014843) #8	WASL (ENSRFEG00010014925) #10	LMOD2 (ENSRFEG00010015166) #11	ASB15 (ENSRFEG00010015245) #12	ENSRFEG00010015311 #13	IQUB (ENSRFEG00010015538) #14	SLC13A1 (ENSRFEG00010015742) #16	TAS2R16 (ENSRFEG00010015907)	CADPS2 (ENSRFEG00010015967) #17	RNF133 (ENSRFEG00010016316) #18	FEZF1 (ENSRFEG00010016383) #19	AASS (ENSRFEG00010016545) #20	PTPRZ1 (ENSRFEG00010016626) #21	FAM3C (ENSRFEG00010016879) #22	WNT16 (ENSRFEG00010016926) #23	CPED1 (ENSRFEG00010016992) #24	ING3 (ENSRFEG00010017054) #25	TSPAN12 (ENSRFEG00010017208) #26	KCND2 (ENSRFEG00010017250) #27	ENSRFEG00010017340	ENSRFEG00010017356	ENSRFEG00010017376 #29	ENSRFEG00010017515 #30	CTTNBP2 (ENSRFEG00010017601) #31	CFTR (ENSRFEG00010017672) #33	ENSRFEG00010018517	ASZ1 (ENSRFEG00010018560) #34	WNT2 (ENSRFEG00010018681) #35	ST7 (ENSRFEG00010018747) #36
Microbat	MODERN SPECIES	1182																FAM3C (ENSMLUG00000016022) #22	WNT16 (ENSMLUG00000016018) #23	CPED1 (ENSMLUG00000016002) #24	ING3 (ENSMLUG00000016322) #25	ENSMLUG00000024124	TSPAN12 (ENSMLUG00000010727) #26	KCND2 (ENSMLUG00000010696) #27	ENSMLUG00000029655	ENSMLUG00000025422
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Suina	ANCESTRAL SPECIES	19	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Chacoan peccary	MODERN SPECIES	72	ENSCWAG00000003365 #9	ENSCWAG00000003358	WASL (ENSCWAG00000003340) #10	LMOD2 (ENSCWAG00000003324) #11	ASB15 (ENSCWAG00000003309) #12	NDUFA5 (ENSCWAG00000003275) #13	IQUB (ENSCWAG00000003237) #14	SLC13A1 (ENSCWAG00000003215) #16	TAS2R16 (ENSCWAG00000003208)	CADPS2 (ENSCWAG00000002856) #17	FEZF1 (ENSCWAG00000002791) #19	ENSCWAG00000002779	AASS (ENSCWAG00000002749) #20	PTPRZ1 (ENSCWAG00000001255) #21	ENSCWAG00000001100	FAM3C (ENSCWAG00000001074) #22	WNT16 (ENSCWAG00000001054) #23	CPED1 (ENSCWAG00000000900) #24	ING3 (ENSCWAG00000000811) #25	TSPAN12 (ENSCWAG00000000779) #26	KCND2 (ENSCWAG00000000757) #27	ENSCWAG00000000745	LSM8 (ENSCWAG00000000714) #30
Pig	MODERN SPECIES	9	TMEM229A (ENSSSCG00000016600)	SPAM1 (ENSSSCG00000016601) #7	HYAL4 (ENSSSCG00000016603) #8	WASL (ENSSSCG00000016604) #10	LMOD2 (ENSSSCG00000016605) #11	ASB15 (ENSSSCG00000016606) #12	NDUFA5 (ENSSSCG00000037869) #13	IQUB (ENSSSCG00000016608) #14	SLC13A1 (ENSSSCG00000016609) #16	ENSSSCG00000035710	TAS2R16 (ENSSSCG00000037368)	CADPS2 (ENSSSCG00000016611) #17	FEZF1 (ENSSSCG00000031221) #19	AASS (ENSSSCG00000016613) #20	PTPRZ1 (ENSSSCG00000016614) #21	FAM3C (ENSSSCG00000016616) #22	WNT16 (ENSSSCG00000016617) #23	CPED1 (ENSSSCG00000016618) #24	ING3 (ENSSSCG00000016619) #25	TSPAN12 (ENSSSCG00000016620) #26	KCND2 (ENSSSCG00000016621) #27	ENSSSCG00000062673	ENSSSCG00000063110	ENSSSCG00000048258	ENSSSCG00000016623 #29	LSM8 (ENSSSCG00000021652) #30	ENSSSCG00000050786	CTTNBP2 (ENSSSCG00000016625) #31	CFTR (ENSSSCG00000016626) #33	ASZ1 (ENSSSCG00000016627) #34	WNT2 (ENSSSCG00000016628) #35
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Camelidae	ANCESTRAL SPECIES	2	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01020000230614	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Arabian camel	MODERN SPECIES	33	TMEM229A (ENSCDRG00005005414)	SPAM1 (ENSCDRG00005005391) #7	HYAL4 (ENSCDRG00005005339) #8	ENSCDRG00005005196 #9	ENSCDRG00005005100 #10	LMOD2 (ENSCDRG00005005071) #11	ASB15 (ENSCDRG00005005043) #12	NDUFA5 (ENSCDRG00005005014) #13	IQUB (ENSCDRG00005004987) #14	ENSCDRG00005004974	SLC13A1 (ENSCDRG00005004922) #16	CADPS2 (ENSCDRG00005004422) #17	FEZF1 (ENSCDRG00005004315) #19	AASS (ENSCDRG00005004255) #20	PTPRZ1 (ENSCDRG00005004019) #21	FAM3C (ENSCDRG00005003932) #22	WNT16 (ENSCDRG00005003896) #23	CPED1 (ENSCDRG00005003698) #24	ING3 (ENSCDRG00005003592) #25	TSPAN12 (ENSCDRG00005003541) #26	KCND2 (ENSCDRG00005003477) #27	ENSCDRG00005003449	ENSCDRG00005003389 #29	LSM8 (ENSCDRG00005003356) #30	CTTNBP2 (ENSCDRG00005002863) #31	CFTR (ENSCDRG00005002205) #33	ASZ1 (ENSCDRG00005002142) #34	WNT2 (ENSCDRG00005002127) #35	ST7 (ENSCDRG00005002055) #36	CAPZA2 (ENSCDRG00005002005) #37	MET (ENSCDRG00005001975)
Alpaca	MODERN SPECIES	1945				SPAM1 (ENSVPAG00000003018) #7	HYAL4 (ENSVPAG00000003015) #8	WASL (ENSVPAG00000003012) #10	ENSVPAG00000003010 #11	ASB15 (ENSVPAG00000003007) #12	IQUB (ENSVPAG00000003005) #14	SLC13A1 (ENSVPAG00000003002) #16	RNF133 (ENSVPAG00000003000) #18	CADPS2 (ENSVPAG00000002995) #17	FEZF1 (ENSVPAG00000002991) #19	AASS (ENSVPAG00000002985) #20	PTPRZ1 (ENSVPAG00000002983) #21	FAM3C (ENSVPAG00000002982) #22	WNT16 (ENSVPAG00000002981) #23	CPED1 (ENSVPAG00000002979) #24	ING3 (ENSVPAG00000002977) #25
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Pecora	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.a.b.a.d #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00950000182882.A.b.a	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116
Yarkand deer	MODERN SPECIES	9	ENSCHYG00000026962 #7	ENSCHYG00000026956 #7	HYAL4 (ENSCHYG00000026955) #8	LMOD2 (ENSCHYG00000026950) #11	WASL (ENSCHYG00000026946) #10	ASB15 (ENSCHYG00000026941) #12	ENSCHYG00000026937 #13	IQUB (ENSCHYG00000026931) #14	SLC13A1 (ENSCHYG00000026920) #16	TAS2R16 (ENSCHYG00000026914)	ENSCHYG00000026909	CADPS2 (ENSCHYG00000026611) #17	FEZF1 (ENSCHYG00000026487) #19	AASS (ENSCHYG00000026446) #20	ENSCHYG00000024383	FAM3C (ENSCHYG00000024340) #22	WNT16 (ENSCHYG00000024300) #23	CPED1 (ENSCHYG00000024149) #24	ING3 (ENSCHYG00000023988) #25	TSPAN12 (ENSCHYG00000023924) #26	KCND2 (ENSCHYG00000023858) #27	ENSCHYG00000023821	ENSCHYG00000023772 #30	ENSCHYG00000023745	ENSCHYG00000023709	ENSCHYG00000023676	ENSCHYG00000023641	ENSCHYG00000023578	TRGV9 (ENSCHYG00000023546)	ENSCHYG00000023515	AMPH (ENSCHYG00000023423)
Percora_a	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.a.b.a.d #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00950000182882.A.b.a	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116
Bovidae	ANCESTRAL SPECIES	12	ENSGT01020000230364.a.a.b.a.d #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00950000182882.A.b.a	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116
Bovinae	ANCESTRAL SPECIES	8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00940000153305.d.`b.b	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a	ENSGT00950000182882.A.b.a	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000159695.h	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866
Bos	ANCESTRAL SPECIES	8	ENSGT01020000230364.a.a.b.b #8	ENSGT01100000263481.n.a.a.a.b.a.a.a.a.a.a.a.b.a.a	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00940000153305.d.`b.b	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b	ENSGT00940000161777.b #29	ENSGT00730000111212.i.a #30	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00950000185265.c	ENSGT00950000185265.d	ENSGT00940000153143.a.a.f.e.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b	ENSGT00940000153143.a.a.f.e.a.a.b.a	ENSGT00940000153143.a.a.f.e.a.a.b.b
Bos_b	ANCESTRAL SPECIES	7	ENSGT01020000230364.a.a.b.b #8	ENSGT01100000263481.n.a.a.a.b.a.a.a.a.a.a.a.b.a.a	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.nb #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00940000153305.d.`b.b	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b	ENSGT00550000074794.k.b.a	ENSGT00730000111212.i.a #30	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00940000153143.a.a.f.e.a.a.b.a	ENSGT00940000153143.a.a.f.e.a.a.b.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00950000182882.A.b.a
Cow	MODERN SPECIES	23	ENSBTAG00000040349 #9	SPAM1 (ENSBTAG00000004640) #7	HYAL4 (ENSBTAG00000005548) #8	ENSBTAG00000054421	WASL (ENSBTAG00000004643) #10	LMOD2 (ENSBTAG00000002157) #11	ASB15 (ENSBTAG00000002151) #12	NDUFA5 (ENSBTAG00000009334) #13	IQUB (ENSBTAG00000004405) #14	SLC13A1 (ENSBTAG00000006674) #16	TAS2R16 (ENSBTAG00000032049)	CADPS2 (ENSBTAG00000005110) #17	FEZF1 (ENSBTAG00000005103) #19	AASS (ENSBTAG00000012128) #20	PTPRZ1 (ENSBTAG00000012119) #21	FAM3C (ENSBTAG00000007976) #22	WNT16 (ENSBTAG00000002940) #23	CPED1 (ENSBTAG00000002938) #24	ING3 (ENSBTAG00000016332) #25	TSPAN12 (ENSBTAG00000015337) #26	KCND2 (ENSBTAG00000032077) #27	ENSBTAG00000031464	ENSBTAG00000006152	LSM8 (ENSBTAG00000012649) #30	ENSBTAG00000049399	ENSBTAG00000002859	ENSBTAG00000055254	ENSBTAG00000053474	ENSBTAG00000000144	AMPH (ENSBTAG00000031967)	VPS41 (ENSBTAG00000007305)
Hybrid Bos Indicus	MODERN SPECIES	23	HYAL4 (ENSBIXG00005022327) #8	ENSBIXG00005022311	WASL (ENSBIXG00005022282) #10	LMOD2 (ENSBIXG00005022196) #11	ASB15 (ENSBIXG00005022162) #12	ENSBIXG00005003748 #13	IQUB (ENSBIXG00005003742) #14	ENSBIXG00005022025	SLC13A1 (ENSBIXG00005003706) #16	TAS2R16 (ENSBIXG00005021920)	CADPS2 (ENSBIXG00005007840) #17	FEZF1 (ENSBIXG00005000004) #19	ENSBIXG00005003630	AASS (ENSBIXG00005021503) #20	PTPRZ1 (ENSBIXG00005021416) #21	FAM3C (ENSBIXG00005021252) #22	WNT16 (ENSBIXG00005021232) #23	CPED1 (ENSBIXG00005021186) #24	ING3 (ENSBIXG00005021098) #25	ENSBIXG00005021009	TSPAN12 (ENSBIXG00005020981) #26	KCND2 (ENSBIXG00005020893) #27	ENSBIXG00005020857	ENSBIXG00005020842	ENSBIXG00005020819	LSM8 (ENSBIXG00005007213) #30	ENSBIXG00005020753	ENSBIXG00005003508	ENSBIXG00005020739	ENSBIXG00005020732	ENSBIXG00005020722
Bos_a	ANCESTRAL SPECIES	12	ENSGT01020000230364.a.a.b.a.d #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01100000263481.n.a.a.a.b.a.a.a.a.a.a.a.b.a.a	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.a.b.b.a.a.b	ENSGT00940000161777.b #29	ENSGT00730000111212.i.a #30	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00950000185265.c	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b	ENSGT00940000153143.a.a.f.e.a.a.b.a	ENSGT00940000153143.a.a.f.e.a.a.b.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.a.f.e.a.b
Wild yak	MODERN SPECIES	648														AASS (ENSBMUG00000024538) #20	PTPRZ1 (ENSBMUG00000024506) #21	FAM3C (ENSBMUG00000024443) #22	WNT16 (ENSBMUG00000024438) #23	CPED1 (ENSBMUG00000024421) #24	ING3 (ENSBMUG00000024352) #25	TSPAN12 (ENSBMUG00000024317) #26
Domestic yak	MODERN SPECIES	23	ENSBGRG00000024591	WASL (ENSBGRG00000024616) #10	ENSBGRG00000024664	LMOD2 (ENSBGRG00000024670) #11	ASB15 (ENSBGRG00000024698) #12	ENSBGRG00000024768 #13	IQUB (ENSBGRG00000024831) #14	ENSBGRG00000024901	ENSBGRG00000024906	SLC13A1 (ENSBGRG00000024917) #16	TAS2R16 (ENSBGRG00000025023)	CADPS2 (ENSBGRG00000025072) #17	FEZF1 (ENSBGRG00000025722) #19	AASS (ENSBGRG00000025745) #20	PTPRZ1 (ENSBGRG00000025791) #21	FAM3C (ENSBGRG00000026163) #22	WNT16 (ENSBGRG00000026173) #23	CPED1 (ENSBGRG00000026179) #24	ENSBGRG00000026183	ING3 (ENSBGRG00000026186) #25	ENSBGRG00000026200	TSPAN12 (ENSBGRG00000026203) #26	KCND2 (ENSBGRG00000026206) #27	ENSBGRG00000026214	ENSBGRG00000026222	ENSBGRG00000026227	ENSBGRG00000026231	ENSBGRG00000007313 #30	ENSBGRG00000007452	ENSBGRG00000007474	ENSBGRG00000007497
American bison	MODERN SPECIES	3018											CADPS2 (ENSBBBG00000018661) #17	FEZF1 (ENSBBBG00000018682) #19	ENSBBBG00000004654	AASS (ENSBBBG00000018722) #20	PTPRZ1 (ENSBBBG00000018816) #21	FAM3C (ENSBBBG00000018849) #22	WNT16 (ENSBBBG00000018861) #23	CPED1 (ENSBBBG00000004771) #24	ING3 (ENSBBBG00000018907) #25	FRMD8 (ENSBBBG00000004816)	SLC25A45 (ENSBBBG00000004847)	TIGD3 (ENSBBBG00000019013)	DPF2 (ENSBBBG00000019075)	CDC42EP2 (ENSBBBG00000004891)	POLA2 (ENSBBBG00000019103)	ENSBBBG00000019114	CAPN1 (ENSBBBG00000019194)	SPDYC (ENSBBBG00000004946)	SYVN1 (ENSBBBG00000007101)	MRPL49 (ENSBBBG00000007626)	FAU (ENSBBBG00000005004)
Caprinae	ANCESTRAL SPECIES	10	ENSGT01020000230364.a.b #9	ENSGT01020000230364.a.a.b.a.d #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT01100000263477.B.d.b	ENSGT00940000163382	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00730000111212.i.b #30	ENSGT00940000153143.a.b.b.a.b.d.a	ENSGT00950000185265	ENSGT00940000153143.a.a.f.e.b.b	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.b	ENSGT00940000153143.a.a.f.e.a.a.a	ENSGT00940000153143.a.a.f.e.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b	ENSGT00950000182882.A.b.a	ENSGT00390000000481
Rambouillet Sheep	MODERN SPECIES	20	ENSOARG00020004099 #9	SPAM1 (ENSOARG00020004042) #7	HYAL4 (ENSOARG00020004017) #8	WASL (ENSOARG00020003974) #10	LMOD2 (ENSOARG00020003951) #11	ASB15 (ENSOARG00020003915) #12	ENSOARG00020003833 #13	ENSOARG00020003808	SLC13A1 (ENSOARG00020003399) #16	TAS2R16 (ENSOARG00020003346)	ENSOARG00020003299	CADPS2 (ENSOARG00020002550) #17	FEZF1 (ENSOARG00020002443) #19	AASS (ENSOARG00020002396) #20	PTPRZ1 (ENSOARG00020002274) #21	FAM3C (ENSOARG00020002246) #22	WNT16 (ENSOARG00020002230) #23	CPED1 (ENSOARG00020002197) #24	ING3 (ENSOARG00020002148) #25	TSPAN12 (ENSOARG00020002120) #26	KCND2 (ENSOARG00020002102) #27	ENSOARG00020002086	ENSOARG00020002076	LSM8 (ENSOARG00020002018) #30	ENSOARG00020002009	ENSOARG00020002006	ENSOARG00020002001	ENSOARG00020001983	ENSOARG00020001968	ENSOARG00020001954	ENSOARG00020001937
Goat	MODERN SPECIES	23	TMEM229A (ENSCHIG00000011201)	ENSCHIG00000015094 #7	ENSCHIG00000020486 #9	ENSCHIG00000020009 #7	HYAL4 (ENSCHIG00000003866) #8	WASL (ENSCHIG00000016281) #10	LMOD2 (ENSCHIG00000023924) #11	ASB15 (ENSCHIG00000018758) #12	NDUFA5 (ENSCHIG00000014906) #13	IQUB (ENSCHIG00000021401) #14	SLC13A1 (ENSCHIG00000014530) #16	CADPS2 (ENSCHIG00000022820) #17	FEZF1 (ENSCHIG00000012204) #19	AASS (ENSCHIG00000009703) #20	PTPRZ1 (ENSCHIG00000017298) #21	FAM3C (ENSCHIG00000026717) #22	WNT16 (ENSCHIG00000016384) #23	CPED1 (ENSCHIG00000007761) #24	ING3 (ENSCHIG00000009707) #25	TSPAN12 (ENSCHIG00000012755) #26	ENSCHIG00000025503	KCND2 (ENSCHIG00000017913) #27	ENSCHIG00000022010	LSM8 (ENSCHIG00000014201) #30	ENSCHIG00000007301	ENSCHIG00000018076	ENSCHIG00000013794	AMPH (ENSCHIG00000020495)	ENSCHIG00000011903	VPS41 (ENSCHIG00000005959)	ENSCHIG00000020600
Siberian musk deer	MODERN SPECIES	85	ENSMMSG00000021652 #7	HYAL4 (ENSMMSG00000021672) #8	WASL (ENSMMSG00000021691) #10	LMOD2 (ENSMMSG00000021706) #11	ASB15 (ENSMMSG00000021744) #12	ENSMMSG00000021762 #13	IQUB (ENSMMSG00000021786) #14	ENSMMSG00000021855	SLC13A1 (ENSMMSG00000007271) #16	TAS2R16 (ENSMMSG00000007364)	CADPS2 (ENSMMSG00000007406) #17	FEZF1 (ENSMMSG00000007591) #19	AASS (ENSMMSG00000007680) #20	PTPRZ1 (ENSMMSG00000007848) #21	ENSMMSG00000008130	FAM3C (ENSMMSG00000008141) #22	WNT16 (ENSMMSG00000008182) #23	CPED1 (ENSMMSG00000008206) #24	ING3 (ENSMMSG00000008263) #25	TSPAN12 (ENSMMSG00000008324) #26
Cetacea	DUPLICATION
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES	13	ENSGT01100000263518.B.b.b	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a.c #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.hb.b #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a.c.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a.c #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.hb.b #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT01010000229619	ENSGT00950000183004.a.b.a.a.c.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00390000018696.ab.b	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Sperm whale	MODERN SPECIES	16	TMEM229A (ENSPCTG00005002465)	SPAM1 (ENSPCTG00005002472) #7	HYAL4 (ENSPCTG00005002485) #8	WASL (ENSPCTG00005002510) #10	ENSPCTG00005002563 #11	ASB15 (ENSPCTG00005002574) #12	NDUFA5 (ENSPCTG00005002601) #13	IQUB (ENSPCTG00005002620) #14	ENSPCTG00005002648	SLC13A1 (ENSPCTG00005002663) #16	CADPS2 (ENSPCTG00005002800) #17	FEZF1 (ENSPCTG00005003111) #19	AASS (ENSPCTG00005003140) #20	PTPRZ1 (ENSPCTG00005003179) #21	ENSPCTG00005003246	FAM3C (ENSPCTG00005003260) #22	WNT16 (ENSPCTG00005003279) #23	CPED1 (ENSPCTG00005003296) #24	ING3 (ENSPCTG00005003320) #25	TSPAN12 (ENSPCTG00005003339) #26	ENSPCTG00005003353	ENSPCTG00005003369 #27	ENSPCTG00005003384	LSM8 (ENSPCTG00005003422) #30	CTTNBP2 (ENSPCTG00005003446) #31	CFTR (ENSPCTG00005003550) #33	ASZ1 (ENSPCTG00005003795) #34	WNT2 (ENSPCTG00005003803) #35	ST7 (ENSPCTG00005003837) #36	CAPZA2 (ENSPCTG00005003893) #37	MET (ENSPCTG00005000258)
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a.c #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.hb.b #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT01010000229619	ENSGT00950000183004.a.b.a.a.c.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00390000018696.ab.b	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Dolphin	MODERN SPECIES	2342																FAM3C (ENSTTRG00000016229) #22	WNT16 (ENSTTRG00000016228) #23	CPED1 (ENSTTRG00000016227) #24	ING3 (ENSTTRG00000016226) #25	TSPAN12 (ENSTTRG00000016225) #26	KCND2 (ENSTTRG00000016224) #27
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT01020000230364.a.a.b.a.c #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.hb.b #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000162417.B	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT01010000229619	ENSGT00950000183004.a.b.a.a.c.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00390000018696.ab.b	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Monodontidae	ANCESTRAL SPECIES	12	ENSGT01020000230364.a.a.b.a.c #7	ENSGT01020000230364.a.a.b.b #8	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.hb.b #13	ENSGT00390000014326 #14	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000162417.B	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00390000002517.a.b.b.c.b.b	ENSGT00950000183004.a.b.a.a.c.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00390000018696.ab.b	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Narwhal	MODERN SPECIES	306	HYAL4 (ENSMMNG00015009237) #8	WASL (ENSMMNG00015009205) #10	ENSMMNG00015009197	LMOD2 (ENSMMNG00015009190) #11	ASB15 (ENSMMNG00015009175) #12	ENSMMNG00015009163 #13	IQUB (ENSMMNG00015009140) #14	SLC13A1 (ENSMMNG00015009128) #16	ENSMMNG00015009100	CADPS2 (ENSMMNG00015009046) #17	FEZF1 (ENSMMNG00015009003) #19	ENSMMNG00015008989	AASS (ENSMMNG00015008962) #20	PTPRZ1 (ENSMMNG00015008685) #21	ENSMMNG00015008511	ENSMMNG00015008492 #22	WNT16 (ENSMMNG00015008481) #23	CPED1 (ENSMMNG00015008430) #24	ING3 (ENSMMNG00015008385) #25	TSPAN12 (ENSMMNG00015008372) #26	ENSMMNG00015008364	KCND2 (ENSMMNG00015008351) #27	ENSMMNG00015008326 #29	LSM8 (ENSMMNG00015008300) #30	CTTNBP2 (ENSMMNG00015008242) #31	CFTR (ENSMMNG00015008191) #33	ASZ1 (ENSMMNG00015008132) #34	WNT2 (ENSMMNG00015008114) #35	ENSMMNG00015008101	ST7 (ENSMMNG00015007638) #36	CAPZA2 (ENSMMNG00015007277) #37
Beluga whale	MODERN SPECIES	72	SPAM1 (ENSDLEG00000012980) #7	HYAL4 (ENSDLEG00000012997) #8	WASL (ENSDLEG00000013023) #10	ENSDLEG00000013076 #11	ASB15 (ENSDLEG00000013080) #12	NDUFA5 (ENSDLEG00000013110) #13	IQUB (ENSDLEG00000013127) #14	ENSDLEG00000013176	SLC13A1 (ENSDLEG00000013207) #16	CADPS2 (ENSDLEG00000007974) #17	FEZF1 (ENSDLEG00000008135) #19	AASS (ENSDLEG00000008185) #20	ENSDLEG00000008472	PTPRZ1 (ENSDLEG00000008502) #21	ENSDLEG00000008697	ENSDLEG00000008725 #22	WNT16 (ENSDLEG00000008763) #23	CPED1 (ENSDLEG00000008806) #24	ING3 (ENSDLEG00000008957) #25	TSPAN12 (ENSDLEG00000009002) #26	ENSDLEG00000009040	ENSDLEG00000009057 #27	ENSDLEG00000009082 #29	LSM8 (ENSDLEG00000009162) #30	CTTNBP2 (ENSDLEG00000009204) #31	CFTR (ENSDLEG00000009386) #33	ASZ1 (ENSDLEG00000010228) #34	ENSDLEG00000010374	WNT2 (ENSDLEG00000010382) #35	ST7 (ENSDLEG00000010402) #36	CAPZA2 (ENSDLEG00000010489) #37
Vaquita	MODERN SPECIES	20	SPAM1 (ENSPSNG00000020149) #7	HYAL4 (ENSPSNG00000020388) #8	WASL (ENSPSNG00000020424) #10	LMOD2 (ENSPSNG00000020477) #11	ASB15 (ENSPSNG00000020518) #12	ENSPSNG00000020559 #13	SLC13A1 (ENSPSNG00000020626) #16	IQUB (ENSPSNG00000020805) #14	ENSPSNG00000020858	ENSPSNG00000004162	CADPS2 (ENSPSNG00000004337) #17	FEZF1 (ENSPSNG00000004653) #19	AASS (ENSPSNG00000004701) #20	PTPRZ1 (ENSPSNG00000005040) #21	ENSPSNG00000005910	FAM3C (ENSPSNG00000005949) #22	WNT16 (ENSPSNG00000005981) #23	CPED1 (ENSPSNG00000006017) #24	ING3 (ENSPSNG00000006054) #25	TSPAN12 (ENSPSNG00000006100) #26	KCND2 (ENSPSNG00000006128) #27	ENSPSNG00000006167	ENSPSNG00000006207 #29	LSM8 (ENSPSNG00000006282) #30	CTTNBP2 (ENSPSNG00000006336) #31	ENSPSNG00000006366	CFTR (ENSPSNG00000006540) #33	ASZ1 (ENSPSNG00000006996) #34	WNT2 (ENSPSNG00000007074) #35	ST7 (ENSPSNG00000007232) #36	CAPZA2 (ENSPSNG00000007567) #37
Blue whale	MODERN SPECIES	20	TMEM229A (ENSBMSG00010005860)	SPAM1 (ENSBMSG00010005920) #7	HYAL4 (ENSBMSG00010006079) #8	WASL (ENSBMSG00010006101) #10	ENSBMSG00010006117 #11	ASB15 (ENSBMSG00010006126) #12	NDUFA5 (ENSBMSG00010006141) #13	IQUB (ENSBMSG00010006156) #14	ENSBMSG00010006184	SLC13A1 (ENSBMSG00010006206) #16	TAS2R16 (ENSBMSG00010006234)	ENSBMSG00010006242	CADPS2 (ENSBMSG00010006309) #17	AASS (ENSBMSG00010006576) #20	PTPRZ1 (ENSBMSG00010006646) #21	ENSBMSG00010006715 #22	WNT16 (ENSBMSG00010006732) #23	CPED1 (ENSBMSG00010006795) #24	ING3 (ENSBMSG00010006892) #25	TSPAN12 (ENSBMSG00010006907) #26	KCND2 (ENSBMSG00010006920) #27	ENSBMSG00010006935	ENSBMSG00010006964 #29	LSM8 (ENSBMSG00010007016) #30	CTTNBP2 (ENSBMSG00010007046) #31	CFTR (ENSBMSG00010007097) #33	ASZ1 (ENSBMSG00010007122) #34	WNT2 (ENSBMSG00010007149) #35	ST7 (ENSBMSG00010007217) #36	CAPZA2 (ENSBMSG00010007309) #37	MET (ENSBMSG00010007360)
Cetacea	ANCESTRAL SPECIES	12	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000155341.g.b	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00950000183004.a.b.a.a.c.b #22	ENSGT00530000063555.A.a.a	ENSGT00940000155527	ENSGT00950000182886.a.b	ENSGT00940000156266	ENSGT00390000016737	ENSGT00530000063841.a	ENSGT00940000158826	ENSGT01050000244841.A.a.a	ENSGT00940000163237	ENSGT00940000161719	ENSGT00940000161698	ENSGT00940000161680	ENSGT00940000163500	ENSGT00940000161786	ENSGT00940000155803
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000163344.b	ENSGT00390000006100.g.b	ENSGT00940000155341.g.b	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00950000183004.a.b.a.a.c.b #22	ENSGT00530000063555.A.a.a	ENSGT00940000155527	ENSGT00950000182886.a.b	ENSGT01050000244891.A.d.a.a	ENSGT00940000156266	ENSGT00390000016737	ENSGT00530000063841.a	ENSGT00940000158826	ENSGT01050000244841.A.a.a	ENSGT00940000163237	ENSGT00940000161719	ENSGT00940000161698	ENSGT00940000161680	ENSGT00940000163500	ENSGT00940000161786
Odontoceti_a	ANCESTRAL SPECIES	23	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000163344.b	ENSGT00390000006100.g.b	ENSGT00940000155341.g.b	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00950000183004.a.b.a.a.c.b #22	ENSGT00530000063555.A.a.a	ENSGT00940000155527	ENSGT00950000185997	ENSGT00950000182886.a.b	ENSGT01050000244891.A.d.a.a	ENSGT00940000156266	ENSGT00390000016737	ENSGT00940000158826	ENSGT01050000244841.A.a.a	ENSGT00940000161719	ENSGT00940000161698	ENSGT00940000161680	ENSGT00940000163500	ENSGT00940000161786	ENSGT00940000155803
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000163344.b	ENSGT00390000006100.g.b	ENSGT00940000155341.g.b	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00950000183004.a.b.a.a.c.b #22	ENSGT00530000063555.A.a.a	ENSGT00940000155527	ENSGT00950000185997	ENSGT00950000182886.a.b	ENSGT01050000244891.A.d.a.a	ENSGT00940000156266	ENSGT00940000153147.m.a.a.a.b.a.a.gb	ENSGT00390000016737	ENSGT00940000158826	ENSGT01050000244841.A.a.a	ENSGT00940000161719	ENSGT00940000161698	ENSGT00940000161680	ENSGT00940000161786	ENSGT00940000155803
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000163344.b	ENSGT00390000006100.g.b	ENSGT00940000155341.g.b	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00950000183004.a.b.a.a.c.b #22	ENSGT00530000063555.A.a.a	ENSGT00940000155527	ENSGT00950000185997.a	ENSGT00950000182886.a.b	ENSGT01050000244891.A.d.a.a	ENSGT00940000156266	ENSGT00940000153147.m.a.a.a.b.a.a.gb	ENSGT00390000016737	ENSGT00940000158826	ENSGT01050000244841.A.a.a	ENSGT00940000161719	ENSGT00940000161698	ENSGT00940000161680	ENSGT00730000111029.g.a	ENSGT00940000161786
Beluga whale	MODERN SPECIES	77	KIAA1211 (ENSDLEG00000014302)	AASDH (ENSDLEG00000014259)	ENSDLEG00000014169	ENSDLEG00000014072	SRP72 (ENSDLEG00000014021)	ARL9 (ENSDLEG00000014007)	THEGL (ENSDLEG00000013936)	HOPX (ENSDLEG00000013911)	ENSDLEG00000013894	ENSDLEG00000013880	ENSDLEG00000013873	LAMTOR2 (ENSDLEG00000013858)	ENSDLEG00000013849	NOA1 (ENSDLEG00000013832)	POLR2B (ENSDLEG00000013785)	ENSDLEG00000013747 #22	IGFBP7 (ENSDLEG00000013741)	ENSDLEG00000013727	ADGRL3 (ENSDLEG00000013614)	ENSDLEG00000013592	ENSDLEG00000013581	TECRL (ENSDLEG00000013514)	ENSDLEG00000013502	RPL15 (ENSDLEG00000013495)	EPHA5 (ENSDLEG00000013414)	ENSDLEG00000013392	CENPC (ENSDLEG00000013357)	ENSDLEG00000013320	ENSDLEG00000010542	TMPRSS11D (ENSDLEG00000010288)	TMPRSS11A (ENSDLEG00000010261)
Narwhal	MODERN SPECIES	307	PPAT (ENSMMNG00015012362)	PAICS (ENSMMNG00015012325)	SRP72 (ENSMMNG00015012225)	ENSMMNG00015012186	ENSMMNG00015012180	THEGL (ENSMMNG00015012165)	HOPX (ENSMMNG00015012141)	ENSMMNG00015012122	ENSMMNG00015012062	ENSMMNG00015012049	ENSMMNG00015012040	ENSMMNG00015012028	NOA1 (ENSMMNG00015012010)	ENSMMNG00015011995	POLR2B (ENSMMNG00015011928)	ENSMMNG00015011894 #22	IGFBP7 (ENSMMNG00015011877)	ADGRL3 (ENSMMNG00015011387)	ENSMMNG00015011177	ENSMMNG00015011164	TECRL (ENSMMNG00015011127)	ENSMMNG00015011106	EPHA5 (ENSMMNG00015010909)	ENSMMNG00015010802	CENPC (ENSMMNG00015010752)	UBA6 (ENSMMNG00015010726)	GNRHR (ENSMMNG00015010706)	TMPRSS11D (ENSMMNG00015010685)	TMPRSS11A (ENSMMNG00015010664)	ENSMMNG00015010645	ENSMMNG00015010607
Blue whale	MODERN SPECIES	16	AASDH (ENSBMSG00010000413)	ENSBMSG00010000372	PPAT (ENSBMSG00010000340)	PAICS (ENSBMSG00010000291)	ENSBMSG00010000244	ARL9 (ENSBMSG00010000197)	ENSBMSG00010000174	THEGL (ENSBMSG00010000109)	HOPX (ENSBMSG00010000065)	ENSBMSG00010014434	ENSBMSG00010014397	ENSBMSG00010014345	NOA1 (ENSBMSG00010014290)	ENSBMSG00010014236	POLR2B (ENSBMSG00010013814)	ENSBMSG00010013726 #22	IGFBP7 (ENSBMSG00010013709)	ENSBMSG00010013694	ENSBMSG00010013680	ADGRL3 (ENSBMSG00010012328)	ENSBMSG00010011844	TECRL (ENSBMSG00010011818)	ENSBMSG00010011805	EPHA5 (ENSBMSG00010011607)	CENPC (ENSBMSG00010011551)	STAP1 (ENSBMSG00010011517)	UBA6 (ENSBMSG00010011479)	GNRHR (ENSBMSG00010011451)	TMPRSS11D (ENSBMSG00010011425)	TMPRSS11A (ENSBMSG00010011350)	TMPRSS11F (ENSBMSG00010011275)
Cetacea	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.a.d #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.a.d #22
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	13	ENSPCTG00005022233	DGKK (ENSPCTG00005022216)	SHROOM4 (ENSPCTG00005022209)	BMP15 (ENSPCTG00005022207)	ENSPCTG00005022201	GSPT2 (ENSPCTG00005022197)	MAGED1 (ENSPCTG00005022188)	ENSPCTG00005022179	ENSPCTG00005022173	DIPK2B (ENSPCTG00005022166)	KDM6A (ENSPCTG00005021226)	DUSP21 (ENSPCTG00005021077)	ENSPCTG00005021071	FUNDC1 (ENSPCTG00005021049)	ENSPCTG00005021039	ENSPCTG00005021033 #22	EFHC2 (ENSPCTG00005020961)	NDP (ENSPCTG00005020930)	MAOB (ENSPCTG00005020909)	MAOA (ENSPCTG00005020779)	ENSPCTG00005020767	ENSPCTG00005020757	ENSPCTG00005020704	ENSPCTG00005020656	GPR82 (ENSPCTG00005020637)	CASK (ENSPCTG00005020288)	NYX (ENSPCTG00005020229)	DDX3X (ENSPCTG00005019909)	USP9X (ENSPCTG00005019450)	MED14 (ENSPCTG00005019253)	C21HXorf38 (ENSPCTG00005019204)
Sperm whale	MODERN SPECIES	18	PPAT (ENSPCTG00005004431)	PAICS (ENSPCTG00005004385)	SRP72 (ENSPCTG00005004329)	ARL9 (ENSPCTG00005004276)	THEGL (ENSPCTG00005004247)	HOPX (ENSPCTG00005004233)	ENSPCTG00005004216	ENSPCTG00005004198	ENSPCTG00005004172	ENSPCTG00005004167	ENSPCTG00005004160	ENSPCTG00005004151	ENSPCTG00005004139	NOA1 (ENSPCTG00005004123)	POLR2B (ENSPCTG00005004031)	ENSPCTG00005004007 #22	IGFBP7 (ENSPCTG00005003998)	ENSPCTG00005003979	ENSPCTG00005003966	ADGRL3 (ENSPCTG00005001783)	TECRL (ENSPCTG00005001362)	ENSPCTG00005001343	EPHA5 (ENSPCTG00005001144)	ENSPCTG00005001061	CENPC (ENSPCTG00005001007)	STAP1 (ENSPCTG00005000943)	UBA6 (ENSPCTG00005000926)	GNRHR (ENSPCTG00005000907)	ENSPCTG00005000891	TMPRSS11D (ENSPCTG00005000868)	TMPRSS11A (ENSPCTG00005000831)
Eulipotyphla	ANCESTRAL SPECIES	214																ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25
Hedgehog	MODERN SPECIES	1112																FAM3C (ENSEEUG00000001328) #22	WNT16 (ENSEEUG00000001323) #23
Common shrew	MODERN SPECIES	5033																FAM3C (ENSSARG00000013032) #22	WNT16 (ENSSARG00000013010) #23	CPED1 (ENSSARG00000012977) #24	ING3 (ENSSARG00000012971) #25
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT01100000263518.B.b.b	ENSGT00390000010899.a.b.b.b	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Xenarthra	ANCESTRAL SPECIES	1588																ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23
Armadillo	MODERN SPECIES	1630																FAM3C (ENSDNOG00000034240) #22	WNT16 (ENSDNOG00000001505) #23
Sloth	MODERN SPECIES	556																FAM3C (ENSCHOG00000003224) #22	ENSCHOG00000003219 #23
Afrotheria	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.a.b	ENSGT00390000018285	ENSGT01100000263518.B.b.b	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Tenrec	MODERN SPECIES	6012																FAM3C (ENSETEG00000002668) #22	WNT16 (ENSETEG00000002663) #23	CPED1 (ENSETEG00000002657) #24
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.a.b	ENSGT00390000018285	ENSGT01100000263518.B.b.b	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Elephant	MODERN SPECIES	428	POT1 (ENSLAFG00000005796)	GPR37 (ENSLAFG00000015710)	ENSLAFG00000004093	HYAL4 (ENSLAFG00000031289) #8	ENSLAFG00000026292 #9	WASL (ENSLAFG00000021439) #10	LMOD2 (ENSLAFG00000007192) #11	ASB15 (ENSLAFG00000011116) #12	NDUFA5 (ENSLAFG00000030971) #13	IQUB (ENSLAFG00000002619) #14	SLC13A1 (ENSLAFG00000005670) #16	CADPS2 (ENSLAFG00000013553) #17	FEZF1 (ENSLAFG00000013550) #19	AASS (ENSLAFG00000004573) #20	PTPRZ1 (ENSLAFG00000004565) #21	FAM3C (ENSLAFG00000010029) #22	WNT16 (ENSLAFG00000010025) #23	ENSLAFG00000005279 #24	ENSLAFG00000032200 #24	ING3 (ENSLAFG00000030488) #25	TSPAN12 (ENSLAFG00000004689) #26	KCND2 (ENSLAFG00000008593) #27	ENSLAFG00000011244 #29	LSM8 (ENSLAFG00000011242) #30	CTTNBP2 (ENSLAFG00000005761) #31	CFTR (ENSLAFG00000005753) #33	ASZ1 (ENSLAFG00000005746) #34	WNT2 (ENSLAFG00000022699) #35	ST7 (ENSLAFG00000016129) #36	CAPZA2 (ENSLAFG00000007766) #37	MET (ENSLAFG00000011703)
Hyrax	MODERN SPECIES	112																FAM3C (ENSPCAG00000014787) #22	WNT16 (ENSPCAG00000014754) #23
Marsupialia	ANCESTRAL SPECIES	4	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000161777.b #29	ENSGT00940000153661.b	ENSGT00940000161777.a ##29	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37
Opossum	MODERN SPECIES	7	HYAL4 (ENSMODG00000015370) #8	ENSMODG00000015371 #9	ENSMODG00000015374	WASL (ENSMODG00000015378) #10	ASB15 (ENSMODG00000015383) #12	NDUFA5 (ENSMODG00000045978) #13	ENSMODG00000037075	ENSMODG00000029118	IQUB (ENSMODG00000015389) #14	SLC13A1 (ENSMODG00000015406) #16	RNF148 (ENSMODG00000029167)	CADPS2 (ENSMODG00000015438) #17	FEZF1 (ENSMODG00000015458) #19	AASS (ENSMODG00000015461) #20	PTPRZ1 (ENSMODG00000015471) #21	FAM3C (ENSMODG00000039929) #22	WNT16 (ENSMODG00000015480) #23	ENSMODG00000038957 #24	ENSMODG00000039477	ENSMODG00000015486 #24	ING3 (ENSMODG00000015490) #25	TSPAN12 (ENSMODG00000015495) #26	KCND2 (ENSMODG00000024535) #27	ENSMODG00000043163	ENSMODG00000044091	ENSMODG00000015504 #29	ENSMODG00000015511	ENSMODG00000042953	ENSMODG00000024541	ENSMODG00000015525 ##29	ENSMODG00000027321
Marsupialia_b	ANCESTRAL SPECIES	10	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT01030000234637.b.c	ENSGT00940000159855	ENSGT00390000003809	ENSGT00940000161807	ENSGT00390000013859
Diprotodontia	ANCESTRAL SPECIES	28	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT01030000234637.b.c	ENSGT00940000159855	ENSGT00390000003809	ENSGT00940000161807	ENSGT00390000013859
Diprotodontia_a	ANCESTRAL SPECIES	27	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099.yb #13	ENSGT00390000014326 #14	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382	ENSGT00940000163928 #18	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT01030000234637.b.c	ENSGT00940000159855	ENSGT00390000003809	ENSGT00940000161807	ENSGT00390000013859
Common wonbat	MODERN SPECIES	685					WASL (ENSVURG00010023873) #10	LMOD2 (ENSVURG00010023872) #11	ASB15 (ENSVURG00010023863) #12	ENSVURG00010023859 #13	IQUB (ENSVURG00010023856) #14	ENSVURG00010023854 #16	RNF133 (ENSVURG00010023853) #18	CADPS2 (ENSVURG00010023830) #17	FEZF1 (ENSVURG00010023820) #19	AASS (ENSVURG00010023818) #20	PTPRZ1 (ENSVURG00010023813) #21	FAM3C (ENSVURG00010023808) #22	WNT16 (ENSVURG00010023806) #23	CPED1 (ENSVURG00010023799) #24	ING3 (ENSVURG00010023795) #25	TSPAN12 (ENSVURG00010023791) #26	KCND2 (ENSVURG00010023786) #27	ENSVURG00010023782	ENSVURG00010023779 #29	ENSVURG00010023774	ENSVURG00010023770 ##29	ENSVURG00010023766
koala	MODERN SPECIES	166	TMEM229A (ENSPCIG00000003592)	ENSPCIG00000012753 #7	HYAL4 (ENSPCIG00000012752) #8	ENSPCIG00000008425 #9	WASL (ENSPCIG00000008785) #10	LMOD2 (ENSPCIG00000008782) #11	ASB15 (ENSPCIG00000008779) #12	IQUB (ENSPCIG00000026660) #14	SLC13A1 (ENSPCIG00000024800) #16	RNF148 (ENSPCIG00000024798)	RNF133 (ENSPCIG00000024797) #18	CADPS2 (ENSPCIG00000025670) #17	FEZF1 (ENSPCIG00000025669) #19	AASS (ENSPCIG00000013881) #20	PTPRZ1 (ENSPCIG00000013887) #21	FAM3C (ENSPCIG00000011074) #22	WNT16 (ENSPCIG00000011079) #23	CPED1 (ENSPCIG00000011081) #24	ING3 (ENSPCIG00000024863) #25	TSPAN12 (ENSPCIG00000006234) #26	KCND2 (ENSPCIG00000036542) #27	ENSPCIG00000036499	ENSPCIG00000024458
Wallaby	DUPLICATION
Wallaby	MODERN SPECIES	9687																ENSMEUG00000006906 #22
Wallaby	MODERN SPECIES	12008																ENSMEUG00000000806 #22
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000011812 #7	HYAL4 (ENSSHAG00000008511) #8	ENSSHAG00000011027 #9	WASL (ENSSHAG00000030619) #10	LMOD2 (ENSSHAG00000009742) #11	ASB15 (ENSSHAG00000009459) #12	ENSSHAG00000024396 #13	IQUB (ENSSHAG00000008101) #14	SLC13A1 (ENSSHAG00000001720) #16	RNF148 (ENSSHAG00000009015)	RNF133 (ENSSHAG00000008983) #18	CADPS2 (ENSSHAG00000002469) #17	FEZF1 (ENSSHAG00000001391) #19	AASS (ENSSHAG00000017254) #20	PTPRZ1 (ENSSHAG00000016799) #21	ENSSHAG00000015103 #22	WNT16 (ENSSHAG00000027699) #23	CPED1 (ENSSHAG00000013416) #24	ING3 (ENSSHAG00000013063) #25	TSPAN12 (ENSSHAG00000012139) #26	KCND2 (ENSSHAG00000007231) #27	ENSSHAG00000018547	ENSSHAG00000026856	ENSSHAG00000018617	LSM8 (ENSSHAG00000023318) #30	CTTNBP2 (ENSSHAG00000017847) #31	CFTR (ENSSHAG00000030052) #33	ASZ1 (ENSSHAG00000017307) #34	WNT2 (ENSSHAG00000017186) #35	ST7 (ENSSHAG00000016896) #36	CAPZA2 (ENSSHAG00000022040) #37
Tasmanian devil	MODERN SPECIES	2	HIBCH (ENSSHAG00000014635)	INPP1 (ENSSHAG00000023119)	MFSD6 (ENSSHAG00000015290)	NEMP2 (ENSSHAG00000015600)	NAB1 (ENSSHAG00000016153)	GLS (ENSSHAG00000016650)	STAT1 (ENSSHAG00000016913)	STAT4 (ENSSHAG00000022399)	MYO1B (ENSSHAG00000017456)	NABP1 (ENSSHAG00000021070)	CAVIN2 (ENSSHAG00000023028)	ENSSHAG00000025067	ENSSHAG00000030374	ENSSHAG00000020882	ENSSHAG00000020735	ENSSHAG00000002184 #22	ENSSHAG00000010445	ENSSHAG00000013144	ENSSHAG00000013382	STK17B (ENSSHAG00000014825)	HECW2 (ENSSHAG00000015049)	CCDC150 (ENSSHAG00000016389)	GTF3C3 (ENSSHAG00000016483)	C2orf66 (ENSSHAG00000029653)	PGAP1 (ENSSHAG00000016631)	ANKRD44 (ENSSHAG00000016824)	SF3B1 (ENSSHAG00000017564)	COQ10B (ENSSHAG00000017719)	HSPD1 (ENSSHAG00000017750)	HSPE1 (ENSSHAG00000017770)	MOB4 (ENSSHAG00000017821)
Platypus	MODERN SPECIES	1	ENSOANG00000000407 #7	HYAL4 (ENSOANG00000000409) #8	ENSOANG00000000410 #9	WASL (ENSOANG00000004830) #10	LMOD2 (ENSOANG00000004828) #11	NDUFA5 (ENSOANG00000004827) #13	ENSOANG00000004826 #14	ENSOANG00000004825	SLC13A1 (ENSOANG00000004824) #16	ENSOANG00000039363	RNF133 (ENSOANG00000015935) #18	CADPS2 (ENSOANG00000004823) #17	FEZF1 (ENSOANG00000041502) #19	AASS (ENSOANG00000004822) #20	PTPRZ1 (ENSOANG00000004821) #21	FAM3C (ENSOANG00000051321) #22	WNT16 (ENSOANG00000005655) #23	CPED1 (ENSOANG00000005654) #24	ING3 (ENSOANG00000043175) #25	TSPAN12 (ENSOANG00000049624) #26	ENSOANG00000039010 #27	ENSOANG00000011984	ENSOANG00000008771	LSM8 (ENSOANG00000049504) #30	CTTNBP2 (ENSOANG00000021090) #31	CFTR (ENSOANG00000008767) #33	ASZ1 (ENSOANG00000031342) #34	WNT2 (ENSOANG00000008766) #35	ST7 (ENSOANG00000008765) #36	CAPZA2 (ENSOANG00000038071) #37	MET (ENSOANG00000015031)
Sauria	ANCESTRAL SPECIES	4	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382.a	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT00940000159912	ENSGT00530000063540.a
Archelosauria	ANCESTRAL SPECIES	3	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382.a	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT01030000238252	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792
Archosauria	ANCESTRAL SPECIES	4	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382.a	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT01030000238252	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37
Aves	ANCESTRAL SPECIES	1	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT01030000238252	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37
Neognathae	ANCESTRAL SPECIES	3	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Galloanserae	ANCESTRAL SPECIES	3	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Anatidae	ANCESTRAL SPECIES	28	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b.e #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27
Duck	MODERN SPECIES		ENSAPLG00000015872	SPAM1 (ENSAPLG00000015825) #7	ENSAPLG00000015709 #9	WASL (ENSAPLG00000015306) #10	LMOD2 (ENSAPLG00000015178) #11	ASB15 (ENSAPLG00000014812) #12	NDUFA5 (ENSAPLG00000019976) #13	IQUB (ENSAPLG00000014571) #14	ENSAPLG00000014367	SLC13A1 (ENSAPLG00000013575) #16	ENSAPLG00000014404 #17	ENSAPLG00000031194 #17	FEZF1 (ENSAPLG00000015055) #19	AASS (ENSAPLG00000015230) #20	PTPRZ1 (ENSAPLG00000015904) #21	FAM3C (ENSAPLG00000016245) #22	WNT16 (ENSAPLG00000030369) #23	CPED1 (ENSAPLG00000000584) #24	ING3 (ENSAPLG00000002016) #25	TSPAN12 (ENSAPLG00000002596) #26	ENSAPLG00000021328	ENSAPLG00000031003 #27	ENSAPLG00000017686	ENSAPLG00000027810	LSM8 (ENSAPLG00000005115) #30	ENSAPLG00000004753	CTTNBP2 (ENSAPLG00000010400) #31	CFTR (ENSAPLG00000011156) #33	ENSAPLG00000029683	WNT2 (ENSAPLG00000003242) #35	ST7 (ENSAPLG00000010396) #36
Pink-footed goose	MODERN SPECIES	32	GPR37 (ENSABRG00000013226)	ENSABRG00000013204	SPAM1 (ENSABRG00000013201) #7	ENSABRG00000013173 #9	WASL (ENSABRG00000013163) #10	LMOD2 (ENSABRG00000013153) #11	ASB15 (ENSABRG00000013148) #12	NDUFA5 (ENSABRG00000013142) #13	IQUB (ENSABRG00000013138) #14	ENSABRG00000013134	ENSABRG00000013133 #16	CADPS2 (ENSABRG00000013030) #17	FEZF1 (ENSABRG00000012997) #19	AASS (ENSABRG00000012966) #20	PTPRZ1 (ENSABRG00000012900) #21	FAM3C (ENSABRG00000012868) #22	WNT16 (ENSABRG00000012855) #23	CPED1 (ENSABRG00000012820) #24	ING3 (ENSABRG00000012803) #25	TSPAN12 (ENSABRG00000012798) #26	KCND2 (ENSABRG00000012789) #27
Phasianidae	ANCESTRAL SPECIES		ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Japanese quail	MODERN SPECIES		ENSCJPG00005012120	ENSCJPG00005012118	SPAM1 (ENSCJPG00005012116) #7	ENSCJPG00005012113 #9	WASL (ENSCJPG00005012112) #10	LMOD2 (ENSCJPG00005012111) #11	ASB15 (ENSCJPG00005012110) #12	NDUFA5 (ENSCJPG00005012109) #13	IQUB (ENSCJPG00005012108) #14	ENSCJPG00005012107	SLC13A1 (ENSCJPG00005012104) #16	CADPS2 (ENSCJPG00005009705) #17	FEZF1 (ENSCJPG00005009701) #19	AASS (ENSCJPG00005009700) #20	PTPRZ1 (ENSCJPG00005008728) #21	FAM3C (ENSCJPG00005008719) #22	WNT16 (ENSCJPG00005008702) #23	GRM8 (ENSCJPG00005008701)	ZNF800 (ENSCJPG00005008684)	PLXNB2 (ENSCJPG00005008647)	MAPK11 (ENSCJPG00005008561)	ENSCJPG00005008560	ENSCJPG00005008559	HDAC10 (ENSCJPG00005008558)	TUBGCP6 (ENSCJPG00005008557)	SELENOO (ENSCJPG00005008556)	TRABD (ENSCJPG00005008445)	ENSCJPG00005008444	ENSCJPG00005008443	PANX2 (ENSCJPG00005008442)	MOV10L1 (ENSCJPG00005008441)
Phasianidae_b	ANCESTRAL SPECIES	9	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Turkey	MODERN SPECIES		GPR37 (ENSMGAG00000008322)	ENSMGAG00000010101	SPAM1 (ENSMGAG00000008329) #7	ENSMGAG00000008334 #9	WASL (ENSMGAG00000008344) #10	LMOD2 (ENSMGAG00000008371) #11	ASB15 (ENSMGAG00000008383) #12	ENSMGAG00000008411 #13	IQUB (ENSMGAG00000008434) #14	ENSMGAG00000008443	SLC13A1 (ENSMGAG00000008451) #16	CADPS2 (ENSMGAG00000008495) #17	FEZF1 (ENSMGAG00000008529) #19	AASS (ENSMGAG00000008535) #20	PTPRZ1 (ENSMGAG00000008579) #21	FAM3C (ENSMGAG00000008660) #22	WNT16 (ENSMGAG00000008679) #23	CPED1 (ENSMGAG00000008745) #24	ENSMGAG00000021432	ING3 (ENSMGAG00000008695) #25	TSPAN12 (ENSMGAG00000008725) #26	ENSMGAG00000015683	ENSMGAG00000018388 #27	ENSMGAG00000016570	ENSMGAG00000008756	LSM8 (ENSMGAG00000008808) #30	CFTR (ENSMGAG00000008826) #33	ASZ1 (ENSMGAG00000008859) #34	WNT2 (ENSMGAG00000008863) #35	ST7 (ENSMGAG00000008883) #36	CAPZA2 (ENSMGAG00000008904) #37
Chicken	MODERN SPECIES		SPAM1 (ENSGALG00010001664) #7	ENSGALG00010001667	HYAL6 (ENSGALG00010001673) #9	WASL (ENSGALG00010001686) #10	LMOD2 (ENSGALG00010001695) #11	ASB15 (ENSGALG00010001699) #12	NDUFA5 (ENSGALG00010001701) #13	IQUB (ENSGALG00010001706) #14	ATP6AP1 (ENSGALG00010001712)	SLC13A1 (ENSGALG00010001714) #16	CADPS2 (ENSGALG00010001745) #17	FEZF1 (ENSGALG00010001917) #19	ENSGALG00010001236	AASS (ENSGALG00010001234) #20	PTPRZ1 (ENSGALG00010001248) #21	FAM3C (ENSGALG00010001264) #22	WNT16 (ENSGALG00010001305) #23	CPED1 (ENSGALG00010001320) #24	ING3 (ENSGALG00010001349) #25	TSPAN12 (ENSGALG00010001232) #26	KCND2 (ENSGALG00010001419) #27	ENSGALG00010001421	ANKRD26 (ENSGALG00010001443)	LSM8 (ENSGALG00010001456) #30	CTTNBP2 (ENSGALG00010001200) #31	CFTR (ENSGALG00010001202) #33	ASZ1 (ENSGALG00010001207) #34	WNT2 (ENSGALG00010001486) #35	ST7 (ENSGALG00010002280) #36	ENSGALG00010001492	CAPZA2 (ENSGALG00010001501) #37
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Passeriformes	ANCESTRAL SPECIES	3	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Medium ground finch	MODERN SPECIES	27	GPR37 (ENSGFOG00000013286)	ENSGFOG00000013284	SPAM1 (ENSGFOG00000013279) #7	ENSGFOG00000013273 #9	WASL (ENSGFOG00000013269) #10	LMOD2 (ENSGFOG00000013267) #11	ENSGFOG00000013265 #12	NDUFA5 (ENSGFOG00000013262) #13	IQUB (ENSGFOG00000013261) #14	ENSGFOG00000013259	SLC13A1 (ENSGFOG00000012916) #16	CADPS2 (ENSGFOG00000012153) #17	FEZF1 (ENSGFOG00000012083) #19	AASS (ENSGFOG00000012070) #20	PTPRZ1 (ENSGFOG00000012035) #21	FAM3C (ENSGFOG00000012026) #22	WNT16 (ENSGFOG00000012022) #23	CPED1 (ENSGFOG00000011981) #24	ING3 (ENSGFOG00000011963) #25	TSPAN12 (ENSGFOG00000011959) #26	ENSGFOG00000011895	LSM8 (ENSGFOG00000011878) #30	CTTNBP2 (ENSGFOG00000011589) #31	CFTR (ENSGFOG00000009036) #33	WNT2 (ENSGFOG00000008973) #35	ST7 (ENSGFOG00000008942) #36	CAPZA2 (ENSGFOG00000008927) #37	MET (ENSGFOG00000008894)	CAV1 (ENSGFOG00000008885)	CAV2 (ENSGFOG00000008881)	ENSGFOG00000008873
Passeroidea	ANCESTRAL SPECIES	3	ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Zebra finch	MODERN SPECIES	11	GRM8 (ENSTGUG00000004198)	POT1 (ENSTGUG00000004218)	GPR37 (ENSTGUG00000023267)	ENSTGUG00000004255	SPAM1 (ENSTGUG00000004270) #7	ENSTGUG00000004273 #9	WASL (ENSTGUG00000004276) #10	LMOD2 (ENSTGUG00000004327) #11	ENSTGUG00000004331 #14	ENSTGUG00000004340	SLC13A1 (ENSTGUG00000004349) #16	CADPS2 (ENSTGUG00000004403) #17	FEZF1 (ENSTGUG00000004488) #19	AASS (ENSTGUG00000004496) #20	PTPRZ1 (ENSTGUG00000004543) #21	FAM3C (ENSTGUG00000004613) #22	WNT16 (ENSTGUG00000025350) #23	CPED1 (ENSTGUG00000004646) #24	ING3 (ENSTGUG00000004655) #25	TSPAN12 (ENSTGUG00000004668) #26	KCND2 (ENSTGUG00000004691) #27	ENSTGUG00000019694	LSM8 (ENSTGUG00000028972) #30	CTTNBP2 (ENSTGUG00000004732) #31	CFTR (ENSTGUG00000004828) #33	ASZ1 (ENSTGUG00000004962) #34	WNT2 (ENSTGUG00000005016) #35	ENSTGUG00000024421	ST7 (ENSTGUG00000005050) #36	CAPZA2 (ENSTGUG00000021964) #37	MET (ENSTGUG00000005136)
Common canary	MODERN SPECIES	6	GPR37 (ENSSCAG00000003770)	ENSSCAG00000003760	SPAM1 (ENSSCAG00000003752) #7	ENSSCAG00000003738 #9	WASL (ENSSCAG00000003718) #10	LMOD2 (ENSSCAG00000003712) #11	ENSSCAG00000003690 #12	NDUFA5 (ENSSCAG00000003685) #13	IQUB (ENSSCAG00000003666) #14	ENSSCAG00000003656	SLC13A1 (ENSSCAG00000003643) #16	CADPS2 (ENSSCAG00000001348) #17	FEZF1 (ENSSCAG00000000429) #19	AASS (ENSSCAG00000000401) #20	PTPRZ1 (ENSSCAG00000000336) #21	FAM3C (ENSSCAG00000000301) #22	WNT16 (ENSSCAG00000000288) #23	CPED1 (ENSSCAG00000000269) #24	ING3 (ENSSCAG00000000233) #25	TSPAN12 (ENSSCAG00000000213) #26	KCND2 (ENSSCAG00000000182) #27	ENSSCAG00000000133	ENSSCAG00000000121	LSM8 (ENSSCAG00000000112) #30	CTTNBP2 (ENSSCAG00000010165) #31	CFTR (ENSSCAG00000009670) #33	ENSSCAG00000009534 #34	WNT2 (ENSSCAG00000009523) #35	ST7 (ENSSCAG00000009507) #36	CAPZA2 (ENSSCAG00000009492) #37	MET (ENSSCAG00000009475)
Flycatcher	MODERN SPECIES	10	GPR37 (ENSFALG00000025236)	ENSFALG00000028250	SPAM1 (ENSFALG00000024464) #7	ENSFALG00000009879 #9	WASL (ENSFALG00000009888) #10	LMOD2 (ENSFALG00000009898) #11	ENSFALG00000023113 #12	NDUFA5 (ENSFALG00000009900) #13	IQUB (ENSFALG00000009903) #14	ENSFALG00000009908	SLC13A1 (ENSFALG00000009911) #16	CADPS2 (ENSFALG00000009915) #17	FEZF1 (ENSFALG00000009923) #19	AASS (ENSFALG00000009936) #20	PTPRZ1 (ENSFALG00000009943) #21	FAM3C (ENSFALG00000028842) #22	WNT16 (ENSFALG00000025164) #23	CPED1 (ENSFALG00000009963) #24	ING3 (ENSFALG00000009971) #25	TSPAN12 (ENSFALG00000009987) #26	KCND2 (ENSFALG00000010001) #27	ENSFALG00000026847	ENSFALG00000028483	ENSFALG00000025919	LSM8 (ENSFALG00000023574) #30	CTTNBP2 (ENSFALG00000010036) #31	CFTR (ENSFALG00000010051) #33	ASZ1 (ENSFALG00000010054) #34	WNT2 (ENSFALG00000024891) #35	ST7 (ENSFALG00000010057) #36	CAPZA2 (ENSFALG00000025088) #37
Great tit	MODERN SPECIES	10	GPR37 (ENSPMJG00000009841)	ENSPMJG00000009923	SPAM1 (ENSPMJG00000009925) #7	ENSPMJG00000009948 #9	WASL (ENSPMJG00000009949) #10	LMOD2 (ENSPMJG00000009951) #11	ENSPMJG00000009952 #12	NDUFA5 (ENSPMJG00000009953) #13	IQUB (ENSPMJG00000009955) #14	ENSPMJG00000009956	SLC13A1 (ENSPMJG00000010001) #16	CADPS2 (ENSPMJG00000010030) #17	FEZF1 (ENSPMJG00000010035) #19	AASS (ENSPMJG00000010036) #20	PTPRZ1 (ENSPMJG00000010040) #21	FAM3C (ENSPMJG00000010041) #22	WNT16 (ENSPMJG00000010042) #23	CPED1 (ENSPMJG00000010048) #24	ING3 (ENSPMJG00000010056) #25	TSPAN12 (ENSPMJG00000010063) #26	ENSPMJG00000010076 #27	ENSPMJG00000010089	ENSPMJG00000010120	LSM8 (ENSPMJG00000010122) #30	CTTNBP2 (ENSPMJG00000010132) #31	CFTR (ENSPMJG00000010133) #33	ASZ1 (ENSPMJG00000010138) #34	WNT2 (ENSPMJG00000010142) #35	ST7 (ENSPMJG00000010160) #36	CAPZA2 (ENSPMJG00000010167) #37	MET (ENSPMJG00000010222)
Neognathae_c	ANCESTRAL SPECIES		ENSGT01100000263518.B.b.b	ENSGT00940000165940	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216.l #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982.sd.a	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Kakapo	MODERN SPECIES	20	POT1 (ENSSHBG00005001641)	GPR37 (ENSSHBG00005001667)	ENSSHBG00005001702	SPAM1 (ENSSHBG00005001770) #7	ENSSHBG00005001861 #9	WASL (ENSSHBG00005001904) #10	LMOD2 (ENSSHBG00005001924) #11	ASB15 (ENSSHBG00005001937) #12	IQUB (ENSSHBG00005001979) #14	ENSSHBG00005002016	SLC13A1 (ENSSHBG00005002158) #16	CADPS2 (ENSSHBG00005003467) #17	FEZF1 (ENSSHBG00005008618) #19	AASS (ENSSHBG00005008699) #20	PTPRZ1 (ENSSHBG00005009048) #21	FAM3C (ENSSHBG00005009145) #22	ENSSHBG00005009160	WNT16 (ENSSHBG00005009190) #23	CPED1 (ENSSHBG00005009250) #24	ENSSHBG00005009264 #24	ING3 (ENSSHBG00005009270) #25	TSPAN12 (ENSSHBG00005009282) #26	KCND2 (ENSSHBG00005009311) #27	ENSSHBG00005009339	ENSSHBG00005009348 #29	ENSSHBG00005009388	LSM8 (ENSSHBG00005009461) #30	ENSSHBG00005009480 #31	ENSSHBG00005009496 #31	ENSSHBG00005009503	CFTR (ENSSHBG00005009547) #33
Golden eagle	MODERN SPECIES	21	SPAM1 (ENSACCG00020011959) #7	ENSACCG00020012045 #9	WASL (ENSACCG00020012101) #10	LMOD2 (ENSACCG00020012138) #11	ASB15 (ENSACCG00020012171) #12	NDUFA5 (ENSACCG00020012194) #13	IQUB (ENSACCG00020012226) #14	ENSACCG00020012259	ENSACCG00020012300	ENSACCG00020012332 #16	CADPS2 (ENSACCG00020012430) #17	FEZF1 (ENSACCG00020012596) #19	AASS (ENSACCG00020012632) #20	PTPRZ1 (ENSACCG00020012691) #21	ENSACCG00020012828	FAM3C (ENSACCG00020012884) #22	WNT16 (ENSACCG00020012907) #23	CPED1 (ENSACCG00020012968) #24	ING3 (ENSACCG00020013015) #25	TSPAN12 (ENSACCG00020013048) #26	KCND2 (ENSACCG00020013078) #27	ENSACCG00020013093	ENSACCG00020013129	LSM8 (ENSACCG00020013148) #30	CTTNBP2 (ENSACCG00020013195) #31	CFTR (ENSACCG00020013240) #33	ENSACCG00020013258 #34	WNT2 (ENSACCG00020013296) #35	ST7 (ENSACCG00020013343) #36	CAPZA2 (ENSACCG00020013367) #37	MET (ENSACCG00020013383)
African ostrich	MODERN SPECIES	1053	GPR37 (ENSSCUG00000018849)	ENSSCUG00000018848	SPAM1 (ENSSCUG00000018845) #7	HYAL4 (ENSSCUG00000018842) #8	ENSSCUG00000018836 #9	WASL (ENSSCUG00000018832) #10	LMOD2 (ENSSCUG00000018831) #11	ASB15 (ENSSCUG00000018829) #12	NDUFA5 (ENSSCUG00000018828) #13	IQUB (ENSSCUG00000018822) #14	SLC13A1 (ENSSCUG00000018818) #16	CADPS2 (ENSSCUG00000018805) #17	FEZF1 (ENSSCUG00000018796) #19	AASS (ENSSCUG00000018794) #20	PTPRZ1 (ENSSCUG00000018788) #21	FAM3C (ENSSCUG00000018786) #22	WNT16 (ENSSCUG00000018784) #23	CPED1 (ENSSCUG00000018779) #24	ING3 (ENSSCUG00000018774) #25	TSPAN12 (ENSSCUG00000018769) #26	KCND2 (ENSSCUG00000018768) #27
Australian saltwater crocodile	MODERN SPECIES	49	WASL (ENSCPRG00005010885) #10	LMOD2 (ENSCPRG00005010878) #11	ASB15 (ENSCPRG00005010877) #12	NDUFA5 (ENSCPRG00005010869) #13	IQUB (ENSCPRG00005010863) #14	ENSCPRG00005010860	ENSCPRG00005010847	ENSCPRG00005010846 #16	RNF148 (ENSCPRG00005010832)	ENSCPRG00005010829	CADPS2 (ENSCPRG00005010813) #17	FEZF1 (ENSCPRG00005010783) #19	AASS (ENSCPRG00005010757) #20	PTPRZ1 (ENSCPRG00005010748) #21	ENSCPRG00005010728	FAM3C (ENSCPRG00005010721) #22	WNT16 (ENSCPRG00005010718) #23	CPED1 (ENSCPRG00005010685) #24	ING3 (ENSCPRG00005010662) #25	TSPAN12 (ENSCPRG00005010654) #26	KCND2 (ENSCPRG00005010626) #27	ENSCPRG00005010585	ENSCPRG00005010524	ENSCPRG00005010484	LSM8 (ENSCPRG00005010480) #30	CTTNBP2 (ENSCPRG00005010434) #31	CFTR (ENSCPRG00005010391) #33	ASZ1 (ENSCPRG00005010351) #34	WNT2 (ENSCPRG00005010348) #35	ST7 (ENSCPRG00005010327) #36	ENSCPRG00005010321
Cryptodira	ANCESTRAL SPECIES	11	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382.a	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382.a	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37
Testudinidae	ANCESTRAL SPECIES	12	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382.a	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00960000189792	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Goode s thornscrub tortoise	MODERN SPECIES		SPAM1 (ENSGEVG00005020488) #7	HYAL4 (ENSGEVG00005020484) #8	ENSGEVG00005020478 #9	WASL (ENSGEVG00005020473) #10	LMOD2 (ENSGEVG00005020470) #11	ASB15 (ENSGEVG00005020468) #12	ENSGEVG00005020466 #13	IQUB (ENSGEVG00005020462) #14	ENSGEVG00005020458	ENSGEVG00005020438 #16	RNF148 (ENSGEVG00005020434)	CADPS2 (ENSGEVG00005020416) #17	FEZF1 (ENSGEVG00005020406) #19	AASS (ENSGEVG00005020403) #20	PTPRZ1 (ENSGEVG00005020397) #21	FAM3C (ENSGEVG00005020393) #22	WNT16 (ENSGEVG00005020388) #23	ENSGEVG00005020385 #24	ENSGEVG00005020382 #24	ING3 (ENSGEVG00005020379) #25	TSPAN12 (ENSGEVG00005020373) #26	KCND2 (ENSGEVG00005020370) #27	ENSGEVG00005020349	LSM8 (ENSGEVG00005020340) #30	CFTR (ENSGEVG00005020286) #33	ASZ1 (ENSGEVG00005020255) #34	WNT2 (ENSGEVG00005020248) #35	ST7 (ENSGEVG00005020215) #36	ENSGEVG00005020193	CAPZA2 (ENSGEVG00005020187) #37	MET (ENSGEVG00005020173)
Abingdon island giant tortoise	MODERN SPECIES	1938													ENSCABG00000012960	PRPH2 (ENSCABG00000012959)	UBR2 (ENSCABG00000010309)	FAM3C (ENSCABG00000010280) #22	WNT16 (ENSCABG00000010277) #23	ENSCABG00000010274 #24	ENSCABG00000010273 #24	ING3 (ENSCABG00000010272) #25	TSPAN12 (ENSCABG00000010271) #26	KCND2 (ENSCABG00000010268) #27
Emydidae	ANCESTRAL SPECIES	10	ENSGT01020000230364.a.a.b.a #7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00940000163382.a	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a	ENSGT00950000183006.A.b
Three-toed box turtle	MODERN SPECIES	28	HYAL4 (ENSTMTG00000005508) #8	ENSTMTG00000005529 #9	WASL (ENSTMTG00000005564) #10	LMOD2 (ENSTMTG00000005593) #11	ASB15 (ENSTMTG00000005621) #12	NDUFA5 (ENSTMTG00000005661) #13	IQUB (ENSTMTG00000005679) #14	ENSTMTG00000005720	ENSTMTG00000005746 #16	CADPS2 (ENSTMTG00000005774) #17	ENSTMTG00000005924	RNF148 (ENSTMTG00000005937)	FEZF1 (ENSTMTG00000005956) #19	AASS (ENSTMTG00000005973) #20	PTPRZ1 (ENSTMTG00000006041) #21	FAM3C (ENSTMTG00000006113) #22	WNT16 (ENSTMTG00000006146) #23	CPED1 (ENSTMTG00000006179) #24	ING3 (ENSTMTG00000006434) #25	TSPAN12 (ENSTMTG00000006457) #26	KCND2 (ENSTMTG00000006474) #27	ENSTMTG00000006488	ENSTMTG00000006508	CTTNBP2 (ENSTMTG00000006565) #31	CFTR (ENSTMTG00000006673) #33	ASZ1 (ENSTMTG00000007462) #34	WNT2 (ENSTMTG00000007579) #35	ST7 (ENSTMTG00000007597) #36	CAPZA2 (ENSTMTG00000007614) #37	MET (ENSTMTG00000007665)	CAV1 (ENSTMTG00000008094)
painted turtle	MODERN SPECIES	7	ENSCPBG00000020766	HYAL4 (ENSCPBG00000020764) #8	ENSCPBG00000020761 #9	WASL (ENSCPBG00000020695) #10	LMOD2 (ENSCPBG00000020678) #11	ASB15 (ENSCPBG00000020670) #12	NDUFA5 (ENSCPBG00000020662) #13	IQUB (ENSCPBG00000020650) #14	ENSCPBG00000020639	SLC13A1 (ENSCPBG00000020633) #16	RNF148 (ENSCPBG00000020629)	CADPS2 (ENSCPBG00000008933) #17	FEZF1 (ENSCPBG00000008446) #19	AASS (ENSCPBG00000008417) #20	PTPRZ1 (ENSCPBG00000008360) #21	FAM3C (ENSCPBG00000008326) #22	WNT16 (ENSCPBG00000008323) #23	ENSCPBG00000008316 #24	ING3 (ENSCPBG00000008307) #25	TSPAN12 (ENSCPBG00000008296) #26	ENSCPBG00000008270	KCND2 (ENSCPBG00000008266) #27	ENSCPBG00000008257	ENSCPBG00000008248	ENSCPBG00000008183	LSM8 (ENSCPBG00000008154) #30	ENSCPBG00000008135 #31	ENSCPBG00000008123 #31	CFTR (ENSCPBG00000007379) #33	ASZ1 (ENSCPBG00000007263) #34	WNT2 (ENSCPBG00000007227) #35
Chinese turtle	MODERN SPECIES	1049	SPAM1 (ENSPSIG00000013181) #7	ENSPSIG00000013129 #9	ENSPSIG00000001365	WASL (ENSPSIG00000012603) #10	LMOD2 (ENSPSIG00000012566) #11	ENSPSIG00000001353	ASB15 (ENSPSIG00000012277) #12	NDUFA5 (ENSPSIG00000012270) #13	IQUB (ENSPSIG00000012185) #14	ENSPSIG00000012174	SLC13A1 (ENSPSIG00000011581) #16	CADPS2 (ENSPSIG00000010156) #17	FEZF1 (ENSPSIG00000009843) #19	AASS (ENSPSIG00000008076) #20	PTPRZ1 (ENSPSIG00000007851) #21	FAM3C (ENSPSIG00000007088) #22	WNT16 (ENSPSIG00000007055) #23	CPED1 (ENSPSIG00000006819) #24	ING3 (ENSPSIG00000006786) #25	TSPAN12 (ENSPSIG00000006353) #26	ENSPSIG00000006333	ENSPSIG00000001347	KCND2 (ENSPSIG00000006329) #27	ENSPSIG00000001336	ENSPSIG00000017191	ENSPSIG00000017169	ENSPSIG00000017066	LSM8 (ENSPSIG00000017054) #30	CTTNBP2 (ENSPSIG00000017035) #31	CFTR (ENSPSIG00000016860) #33	ASZ1 (ENSPSIG00000016815) #34
Lepidosauria	ANCESTRAL SPECIES	31	ENSGT00970000193473	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382.b	ENSGT00990000210432	ENSGT00940000163382.a	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT01030000238252	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Episquamata	ANCESTRAL SPECIES	3	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382.b	ENSGT00990000210432	ENSGT00940000163382.a	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000153661	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT01030000238252	ENSGT00880000138051.a #34	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a	ENSGT00950000183006.A.b
Toxicofera	ANCESTRAL SPECIES	7	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000163382.b	ENSGT00940000163382.a	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216.b #24	ENSGT00390000015216.a #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT01030000238252	ENSGT00880000138051.a #34	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Elapidae	ANCESTRAL SPECIES	6	ENSGT00390000018285	ENSGT01100000263518.B.b.b	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216.b #24	ENSGT01000000221730	ENSGT00390000015216.a #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000153661	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Elapidae_a	ANCESTRAL SPECIES	61	ENSGT00390000018285	ENSGT01100000263518.B.b.b	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216.b #24	ENSGT01000000221730	ENSGT00390000015216.a #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00390000000873.a.b.a #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a
Acanthophiinae	ANCESTRAL SPECIES	57	ENSGT00390000018285	ENSGT01100000263518.B.b.b	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216.b #24	ENSGT01000000221730	ENSGT00390000015216.a #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00940000153661	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00390000000873.a.b.a #36	ENSGT00950000183119.a.e.b #37
Eastern brown snake	MODERN SPECIES	58																FAM3C (ENSPTXG00000010044) #22	WNT16 (ENSPTXG00000010045) #23	ENSPTXG00000010046 #24	ENSPTXG00000010047 #24	ING3 (ENSPTXG00000010048) #25	TSPAN12 (ENSPTXG00000010049) #26	ENSPTXG00000010050 #27	ENSPTXG00000010051	ENSPTXG00000010059	LSM8 (ENSPTXG00000010061) #30	CTTNBP2 (ENSPTXG00000010062) #31	CFTR (ENSPTXG00000010072) #33	ASZ1 (ENSPTXG00000010523) #34	ST7 (ENSPTXG00000010536) #36	CAPZA2 (ENSPTXG00000011530) #37	MET (ENSPTXG00000011531)
Mainland tiger snake	MODERN SPECIES	26	HYAL4 (ENSNSUG00000011415) #8	ENSNSUG00000011419 #9	WASL (ENSNSUG00000011420) #10	ENSNSUG00000011421 #11	ASB15 (ENSNSUG00000011422) #12	NDUFA5 (ENSNSUG00000011424) #13	IQUB (ENSNSUG00000011425) #14	ENSNSUG00000011430	SLC13A1 (ENSNSUG00000011433) #16	CADPS2 (ENSNSUG00000011811) #17	ENSNSUG00000011825	ENSNSUG00000011827	FEZF1 (ENSNSUG00000011831) #19	AASS (ENSNSUG00000011865) #20	PTPRZ1 (ENSNSUG00000012025) #21	FAM3C (ENSNSUG00000012026) #22	WNT16 (ENSNSUG00000012027) #23	CPED1 (ENSNSUG00000012028) #24	ENSNSUG00000012029	ING3 (ENSNSUG00000012030) #25	TSPAN12 (ENSNSUG00000012031) #26	KCND2 (ENSNSUG00000012032) #27	ENSNSUG00000012034	ENSNSUG00000012035	ENSNSUG00000012038	LSM8 (ENSNSUG00000012040) #30	CTTNBP2 (ENSNSUG00000012041) #31	CFTR (ENSNSUG00000012053) #33	ENSNSUG00000012057 #34	ST7 (ENSNSUG00000012058) #36	CAPZA2 (ENSNSUG00000012669) #37
Blue-lipped sea krait	MODERN SPECIES	6214																FAM3C (ENSLLTG00000018446) #22	WNT16 (ENSLLTG00000018447) #23
Indian cobra	MODERN SPECIES	10	ENSNNAG00000005815 #9	WASL (ENSNNAG00000005834) #10	LMOD2 (ENSNNAG00000005853) #11	ASB15 (ENSNNAG00000005917) #12	NDUFA5 (ENSNNAG00000006009) #13	IQUB (ENSNNAG00000006025) #14	ENSNNAG00000006069	ENSNNAG00000006096 #16	CADPS2 (ENSNNAG00000006131) #17	ENSNNAG00000006247	ENSNNAG00000006263	ENSNNAG00000006281	FEZF1 (ENSNNAG00000006291) #19	AASS (ENSNNAG00000006311) #20	PTPRZ1 (ENSNNAG00000006362) #21	FAM3C (ENSNNAG00000006396) #22	WNT16 (ENSNNAG00000006418) #23	ENSNNAG00000006451 #24	ENSNNAG00000006479	ING3 (ENSNNAG00000006488) #25	TSPAN12 (ENSNNAG00000006500) #26	KCND2 (ENSNNAG00000006526) #27	ENSNNAG00000006538	ENSNNAG00000006556	LSM8 (ENSNNAG00000006583) #30	CTTNBP2 (ENSNNAG00000006600) #31	CFTR (ENSNNAG00000006666) #33	ASZ1 (ENSNNAG00000006732) #34	ST7 (ENSNNAG00000006862) #36	CAPZA2 (ENSNNAG00000007317) #37	ENSNNAG00000007327
Lizard	MODERN SPECIES	4	WASL (ENSACAG00000000979) #10	LMOD2 (ENSACAG00000000951) #11	ASB15 (ENSACAG00000000851) #12	NDUFA5 (ENSACAG00000038064) #13	IQUB (ENSACAG00000000747) #14	ENSACAG00000035667	ENSACAG00000006501	ENSACAG00000042703	SLC13A1 (ENSACAG00000006513) #16	CADPS2 (ENSACAG00000006571) #17	ENSACAG00000037678	ENSACAG00000038622	FEZF1 (ENSACAG00000037701) #19	AASS (ENSACAG00000006703) #20	PTPRZ1 (ENSACAG00000006803) #21	FAM3C (ENSACAG00000039015) #22	WNT16 (ENSACAG00000006979) #23	ENSACAG00000042835	ENSACAG00000038723	TAFA5 (ENSACAG00000041810)	ENSACAG00000034745	ENSACAG00000040433	ENSACAG00000044714	ENSACAG00000043588	ENSACAG00000045323	ENSACAG00000045555	TBC1D22A (ENSACAG00000004028)	CERK (ENSACAG00000004135)	GRAMD4 (ENSACAG00000004218)	ENSACAG00000044432	KLB (ENSACAG00000007623)
Laterata	ANCESTRAL SPECIES	6	ENSGT01020000230364.a.a.b.b #8	ENSGT01020000230364.a.b #9	ENSGT00730000110895.b.a #10	ENSGT00940000156567 #11	ENSGT00940000157073 #12	ENSGT00390000008099 #13	ENSGT00390000014326 #14	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00990000210432	ENSGT00940000163382.a	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022	ENSGT00950000183006.B.f.b.a	ENSGT00950000183006.A.b	ENSGT00940000155993	ENSGT00940000159404	ENSGT00940000158685
Argentine black and white tegu	MODERN SPECIES	15	GPR37 (ENSSMRG00000012032)	HYAL4 (ENSSMRG00000012091) #8	ENSSMRG00000012095 #9	WASL (ENSSMRG00000012118) #10	LMOD2 (ENSSMRG00000012119) #11	ASB15 (ENSSMRG00000012120) #12	NDUFA5 (ENSSMRG00000012122) #13	IQUB (ENSSMRG00000012124) #14	ENSSMRG00000012131	ENSSMRG00000012149 #16	CADPS2 (ENSSMRG00000012230) #17	RNF148 (ENSSMRG00000012235)	FEZF1 (ENSSMRG00000012236) #19	AASS (ENSSMRG00000012237) #20	PTPRZ1 (ENSSMRG00000012253) #21	FAM3C (ENSSMRG00000012268) #22	WNT16 (ENSSMRG00000012269) #23	CPED1 (ENSSMRG00000012271) #24	ING3 (ENSSMRG00000012275) #25	TSPAN12 (ENSSMRG00000012286) #26	KCND2 (ENSSMRG00000012315) #27	ENSSMRG00000012339	CTTNBP2 (ENSSMRG00000012375) #31	CFTR (ENSSMRG00000012377) #33	ASZ1 (ENSSMRG00000012548) #34	ST7 (ENSSMRG00000012559) #36	CAPZA2 (ENSSMRG00000012563) #37	MET (ENSSMRG00000012570)	CAV1 (ENSSMRG00000012572)	CAV2 (ENSSMRG00000012573)	TES (ENSSMRG00000012594)
Common wall lizard	MODERN SPECIES	1	HYAL4 (ENSPMRG00000013514) #8	ENSPMRG00000013528 #9	ENSPMRG00000013556	LMOD2 (ENSPMRG00000013576) #11	ASB15 (ENSPMRG00000013589) #12	NDUFA5 (ENSPMRG00000013603) #13	IQUB (ENSPMRG00000013610) #14	ENSPMRG00000013616	SLC13A1 (ENSPMRG00000013622) #16	CADPS2 (ENSPMRG00000013638) #17	ENSPMRG00000013722	RNF148 (ENSPMRG00000013725)	FEZF1 (ENSPMRG00000013731) #19	AASS (ENSPMRG00000013742) #20	PTPRZ1 (ENSPMRG00000010174) #21	FAM3C (ENSPMRG00000010201) #22	WNT16 (ENSPMRG00000010203) #23	CPED1 (ENSPMRG00000010212) #24	ING3 (ENSPMRG00000010234) #25	TSPAN12 (ENSPMRG00000010270) #26	ENSPMRG00000010273	KCND2 (ENSPMRG00000010278) #27	ENSPMRG00000010282	ENSPMRG00000010321	ENSPMRG00000010327	CTTNBP2 (ENSPMRG00000010336) #31	CFTR (ENSPMRG00000010360) #33	ASZ1 (ENSPMRG00000010379) #34	ST7 (ENSPMRG00000010415) #36	CAPZA2 (ENSPMRG00000010465) #37	MET (ENSPMRG00000010518)
tuatara	MODERN SPECIES	209												CADPS2 (ENSSPUG00000006819) #17	AASS (ENSSPUG00000006687) #20	ENSSPUG00000006634 #21	ENSSPUG00000006610 #21	FAM3C (ENSSPUG00000006588) #22	WNT16 (ENSSPUG00000006570) #23	CPED1 (ENSSPUG00000006552) #24	ING3 (ENSSPUG00000006536) #25	TSPAN12 (ENSSPUG00000006520) #26	KCND2 (ENSSPUG00000006490) #27
Anura	ANCESTRAL SPECIES	24	ENSGT00940000160055	ENSGT00940000155948	ENSGT00940000154910.b.b	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b	ENSGT00390000006758.b	ENSGT00940000157402	ENSGT00950000182976.a.b	ENSGT00440000037417.A	ENSGT00940000158268.a	ENSGT01030000234550.a.a.d.a.a #16	ENSGT00590000083094.a.b #17	ENSGT00940000159477 #19	ENSGT00390000013249 #20	ENSGT00940000155529.C #21	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155472.a.a #27	ENSGT00720000108868	ENSGT00940000163982	ENSGT00730000111212 #30	ENSGT00940000158293 #31	ENSGT00940000158567 #33	ENSGT00880000138051.a #34	ENSGT00940000159231 #35	ENSGT00390000000873.a.b #36	ENSGT00950000183119.a.e.b #37	ENSGT00940000158022
Frog	MODERN SPECIES	3	TMEM229A (ENSXETG00000045743)	arl10b (ENSXETG00000022124)	hyal4 (ENSXETG00000038674) #9	wasl (ENSXETG00000022129) #10	lmod2 (ENSXETG00000022132) #11	asb15 (ENSXETG00000022136) #12	ndufa5 (ENSXETG00000038917) #13	iqub (ENSXETG00000022138) #14	atp6ap1.1 (ENSXETG00000038933)	slc13a1 (ENSXETG00000022751) #16	cadps2 (ENSXETG00000022749) #17	fezf1 (ENSXETG00000022748) #19	aass (ENSXETG00000022747) #20	ptprz1 (ENSXETG00000022735) #21	ENSXETG00000045889	fam3c (ENSXETG00000022730) #22	wnt16 (ENSXETG00000022727) #23	cped1 (ENSXETG00000033347) #24	germes (ENSXETG00000022726)	ing3 (ENSXETG00000022722) #25	tspan12 (ENSXETG00000039927) #26	kcnd2 (ENSXETG00000033363) #27	ENSXETG00000047565	ENSXETG00000045849	ENSXETG00000021831	lsm8 (ENSXETG00000021829) #30	cttnbp2 (ENSXETG00000021813) #31	cftr (ENSXETG00000021796) #33	asz1 (ENSXETG00000021791) #34	wnt2 (ENSXETG00000031217) #35	ENSXETG00000035452
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000013725	ASB15 (ENSLLEG00000013660) #12	NDUFA5 (ENSLLEG00000013610) #13	IQUB (ENSLLEG00000013544) #14	ENSLLEG00000013515	ENSLLEG00000013445	SLC13A1 (ENSLLEG00000013350) #16	ENSLLEG00000013323	ENSLLEG00000013299	CADPS2 (ENSLLEG00000011642) #17	ENSLLEG00000011550	FEZF1 (ENSLLEG00000011472) #19	ENSLLEG00000011449	AASS (ENSLLEG00000011337) #20	PTPRZ1 (ENSLLEG00000010960) #21	FAM3C (ENSLLEG00000010809) #22	WNT16 (ENSLLEG00000010707) #23	ENSLLEG00000010688	CPED1 (ENSLLEG00000010420) #24	ING3 (ENSLLEG00000010107) #25	TSPAN12 (ENSLLEG00000009903) #26	KCND2 (ENSLLEG00000009861) #27	ENSLLEG00000009794	ENSLLEG00000009520	LSM8 (ENSLLEG00000009457) #30	CTTNBP2 (ENSLLEG00000009120) #31	CFTR (ENSLLEG00000008811) #33	ASZ1 (ENSLLEG00000008226) #34	ST7 (ENSLLEG00000007521) #36	CAPZA2 (ENSLLEG00000007430) #37	MET (ENSLLEG00000007329)
Coelacanth	MODERN SPECIES	688															ENSLACG00000004449	FAM3C (ENSLACG00000006800) #22	WNT16 (ENSLACG00000007403) #23	ENSLACG00000009239 #24	ENSLACG00000011955	ING3 (ENSLACG00000012102) #25	TSPAN12 (ENSLACG00000012969) #26	ENSLACG00000013287	KCND2 (ENSLACG00000015409) #27
Actinopterygii	ANCESTRAL SPECIES	1	ENSGT00940000155323.a	ENSGT00950000182955.a.b.b	ENSGT00940000155870.b	ENSGT00940000158267	ENSGT00940000165245	ENSGT00940000164528	ENSGT00940000179161	ENSGT00940000156003	ENSGT00550000074844	ENSGT00940000155529.C #21	ENSGT00390000011863.d	ENSGT01070000253775.a.d.a.a.a.a	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00510000047522	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155343.b	ENSGT00940000155472.b ##27	ENSGT00940000153588.a.b	ENSGT00940000159122	ENSGT00390000004323.a	ENSGT00390000014443	ENSGT00940000157983	ENSGT00390000014448	ENSGT01020000230394.e.a.a.b.a.a.b.a.b	ENSGT00940000154003.A	ENSGT00940000157275
Reedfish	MODERN SPECIES		ATXN7L1 (ENSECRG00000003273)	CDHR3 (ENSECRG00000003289)	SYPL1 (ENSECRG00000003308)	NAMPT (ENSECRG00000003323)	pik3cg (ENSECRG00000003338)	PRKAR2B (ENSECRG00000003359)	hbp1 (ENSECRG00000003450)	COG5 (ENSECRG00000003463)	ENSECRG00000003480	dus4l (ENSECRG00000003491)	bcap29 (ENSECRG00000003504)	slc26a4 (ENSECRG00000003515)	slc26a3.2 (ENSECRG00000003681)	cbll1 (ENSECRG00000005325)	ENSECRG00000005357	fam3c (ENSECRG00000005387) #22	wnt16 (ENSECRG00000005399) #23	ing3 (ENSECRG00000005419) #25	tspan12 (ENSECRG00000005443) #26	ENSECRG00000005462 ##27	FLNC (ENSECRG00000005679)	ENSECRG00000006701	sco2 (ENSECRG00000006718)	ncaph2 (ENSECRG00000006729)	socs2 (ENSECRG00000006741)	cradd (ENSECRG00000006747)	PLXNC1 (ENSECRG00000006751)	CEP83 (ENSECRG00000006774)	ndufa12 (ENSECRG00000006791)	nr2c1 (ENSECRG00000006803)	fgd6 (ENSECRG00000006846)
Neopterygii	ANCESTRAL SPECIES	20							ENSGT00940000162514	ENSGT00940000156003	ENSGT00550000074844	ENSGT00940000155529.C #21	ENSGT00390000011863.d	ENSGT01070000253775.a.d.a.a.a.a	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00510000047522	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000157480 #23	ENSGT00390000015216 #24	ENSGT00940000164736	ENSGT00940000156619 #25	ENSGT00510000047764 #26	ENSGT00940000155343.b	ENSGT00940000155472.b ##27	ENSGT00940000153588.a.b	ENSGT00940000159122	ENSGT00390000004323.a	ENSGT00390000014443	ENSGT00940000157983	ENSGT00390000014448	ENSGT01020000230394.e.a.a.b.a.a.b.a.b	ENSGT00940000154003.A
Osteoglossocephalai	ANCESTRAL SPECIES	43							ENSGT01010000222336.b.a.b.a	ENSGT00940000156003	ENSGT00550000074844	ENSGT00940000155529.A ##21	ENSGT00940000155529.C #21	ENSGT01070000253775.a.d.a.a.a.a	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00510000047522	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00940000170238	ENSGT00950000182952.C	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00640000091774	ENSGT00940000154527.a.a.b.a	ENSGT00510000047602	ENSGT00390000016313.a.a	ENSGT00940000160568	ENSGT01030000234814	ENSGT00940000153769.E	ENSGT00730000114050	ENSGT00940000155126.t
Osteoglossiformes	DUPLICATION
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.a.o.a #22
Asian bonytongue	MODERN SPECIES	20	TRHDE (ENSSFOG00015005568)	tbc1d15 (ENSSFOG00015005522)	rab21 (ENSSFOG00015005496)	TMEM19 (ENSSFOG00015005490)	LGR5 (ENSSFOG00015005424)	TSPAN8 (ENSSFOG00015005396)	ENSSFOG00015029014	ENSSFOG00015005360	PTPRB (ENSSFOG00015005286)	KCNMB4 (ENSSFOG00015029027)	cnot2 (ENSSFOG00015005243)	PRICKLE1 (ENSSFOG00015005209)	PPHLN1 (ENSSFOG00015005170)	yaf2 (ENSSFOG00015005147)	pdzrn4 (ENSSFOG00015005129)	fam3c (ENSSFOG00015005114) #22	avpr2l (ENSSFOG00015005098)	ENSSFOG00015005087	nrcama (ENSSFOG00015004992)	ENSSFOG00015004934	ttll1 (ENSSFOG00015004893)	CKAP4 (ENSSFOG00015004870)	ENSSFOG00015004821	chpt1 (ENSSFOG00015029609)	GALNT18 (ENSSFOG00015004745)	EIF4G2 (ENSSFOG00015004640)	ctr9 (ENSSFOG00015004565)	IRAG1 (ENSSFOG00015004552)	ENSSFOG00015025466	AMPD3 (ENSSFOG00015004464)	ENSSFOG00015027785
P. kingsleyae	MODERN SPECIES	650											ENSPKIG00000017030	ENSPKIG00000016987	ENSPKIG00000016956	ttll1 (ENSPKIG00000016905)	cbll1 (ENSPKIG00000016867)	fam3c (ENSPKIG00000016789) #22
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.a.o.b #22
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015000863	apaf1 (ENSSFOG00015000841)	anks1b (ENSSFOG00015000686)	uhrf1bp1l (ENSSFOG00015000671)	IKBIP (ENSSFOG00015000593)	arfgap3 (ENSSFOG00015000529)	pacsin2 (ENSSFOG00015000469)	mcat (ENSSFOG00015000457)	ENSSFOG00015026922	ENSSFOG00015000409	slc26a4 (ENSSFOG00015000396)	slc26a3.1 (ENSSFOG00015000298)	cbll1 (ENSSFOG00015000266)	ENSSFOG00015000257	fam3c (ENSSFOG00015000202) #22	ENSSFOG00015027481 #22	btg1 (ENSSFOG00015032577)	ENSSFOG00015000127	dcn (ENSSFOG00015023966)	lum (ENSSFOG00015023962)	kera (ENSSFOG00015023956)	epyc (ENSSFOG00015023949)	ENSSFOG00015023939	mest (ENSSFOG00015023934)	ucn3l (ENSSFOG00015023931)	ENSSFOG00015023929	ENSSFOG00015023923	slc35b4 (ENSSFOG00015023918)	LRGUK (ENSSFOG00015023914)	exoc4 (ENSSFOG00015023908)	ENSSFOG00015023905
Osteoglossiformes	ANCESTRAL SPECIES	57	ENSGT00390000000616	ENSGT00390000003282.B.f	ENSGT00390000017509	ENSGT00940000160690	ENSGT00940000156027.b	ENSGT00940000157569	ENSGT00940000166500.k	ENSGT00550000074921	ENSGT00940000153541.D	ENSGT00390000007084	ENSGT00940000157262.m.a	ENSGT00940000157494	ENSGT00940000156030.j	ENSGT00990000210069	ENSGT00940000166455	ENSGT00950000183004.a.b.a.a.p #22	ENSGT00950000182952.C	ENSGT00390000010053.k	ENSGT00390000011897	ENSGT00940000159941	ENSGT00940000157444	ENSGT00940000157238.a	ENSGT00390000004860	ENSGT00620000089227	ENSGT00940000156494	ENSGT00940000157928.h	ENSGT00390000013390	ENSGT00940000157869.e.b	ENSGT00940000155146.u	ENSGT00390000017669	ENSGT00530000065109
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	253	CERK (ENSPKIG00000014575)	TAFA5 (ENSPKIG00000014641)	BRD1 (ENSPKIG00000014688)	zbed4 (ENSPKIG00000014756)	alg12 (ENSPKIG00000014771)	creld2 (ENSPKIG00000014813)	pim3 (ENSPKIG00000014884)	ENSPKIG00000014924	acot19 (ENSPKIG00000014971)	lamb4 (ENSPKIG00000015025)	LAMB1 (ENSPKIG00000015123)	slc26a4 (ENSPKIG00000015247)	slc26a3.1 (ENSPKIG00000015437)	cbll1 (ENSPKIG00000015766)	ENSPKIG00000015809	fam3c (ENSPKIG00000015852) #22
P. kingsleyae	MODERN SPECIES	261																fam3c (ENSPKIG00000005028) #22	btg1 (ENSPKIG00000005055)	ENSPKIG00000005069	dcn (ENSPKIG00000005086)	lum (ENSPKIG00000005122)	kera (ENSPKIG00000005157)	epyc (ENSPKIG00000005185)	si:dkeyp-38g8.5 (ENSPKIG00000005205)	ENSPKIG00000005274	mest (ENSPKIG00000005413)	ucn3l (ENSPKIG00000005440)	ENSPKIG00000005453	ENSPKIG00000005475	slc35b4 (ENSPKIG00000005507)	LRGUK (ENSPKIG00000005557)	exoc4 (ENSPKIG00000005678)
Asian bonytongue	MODERN SPECIES	11	tcp11l2 (ENSSFOG00015000867)	ENSSFOG00015000863	apaf1 (ENSSFOG00015000841)	anks1b (ENSSFOG00015000686)	uhrf1bp1l (ENSSFOG00015000671)	IKBIP (ENSSFOG00015000593)	arfgap3 (ENSSFOG00015000529)	pacsin2 (ENSSFOG00015000469)	mcat (ENSSFOG00015000457)	ENSSFOG00015026922	ENSSFOG00015000409	slc26a4 (ENSSFOG00015000396)	slc26a3.1 (ENSSFOG00015000298)	cbll1 (ENSSFOG00015000266)	ENSSFOG00015000257	fam3c (ENSSFOG00015000202) #22	ENSSFOG00015027481 #22	btg1 (ENSSFOG00015032577)	ENSSFOG00015000127	dcn (ENSSFOG00015023966)	lum (ENSSFOG00015023962)	kera (ENSSFOG00015023956)	epyc (ENSSFOG00015023949)	ENSSFOG00015023939	mest (ENSSFOG00015023934)	ucn3l (ENSSFOG00015023931)	ENSSFOG00015023929	ENSSFOG00015023923	slc35b4 (ENSSFOG00015023918)	LRGUK (ENSSFOG00015023914)	exoc4 (ENSSFOG00015023908)
Clupeocephala	ANCESTRAL SPECIES	152								ENSGT01010000222336.b.a.b.a	ENSGT00940000156003.l.b	ENSGT01070000253775.a.d.a.a.a.a	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00510000047522	ENSGT00950000183004.a.b.b ##22	ENSGT00640000091774.a	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00940000180250	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000154527.a.a.b.a	ENSGT00510000047602	ENSGT00390000016313.a.a	ENSGT00940000160568	ENSGT01030000234814
Otomorpha	ANCESTRAL SPECIES	72	ENSGT00940000158123	ENSGT00940000157638	ENSGT00950000182835.d.b	ENSGT00790000123099	ENSGT00390000000121	ENSGT01010000222336.b.a.b.a	ENSGT00940000156003.l.b	ENSGT01070000253775.a.d.a.a.a.a	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00510000047522	ENSGT00950000183004.a.b.b ##22	ENSGT00640000091774.a.c	ENSGT00940000154527.a.a.b.b	ENSGT00940000174622	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068
Otophysi	ANCESTRAL SPECIES	59			ENSGT00970000198416	ENSGT00530000063981.a.g	ENSGT00390000011648.a	ENSGT00390000007283.a	ENSGT00390000001969.b	ENSGT00940000164289.b	ENSGT00390000012875	ENSGT00530000063534.a	ENSGT00940000165989	ENSGT00940000157946.e	ENSGT00940000156400.a	ENSGT00940000154003.A	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00390000009899.b.m	ENSGT00390000005529.b	ENSGT00940000153772.A	ENSGT00940000156878.i.b.b	ENSGT00390000016053	ENSGT00390000013208	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00980000199243	ENSGT00730000111591.b
Characiphysae	ANCESTRAL SPECIES	112				ENSGT00530000063981.a.g	ENSGT00390000011648.a	ENSGT00390000007283.a	ENSGT00390000001969.b	ENSGT00940000164289.b	ENSGT00390000012875	ENSGT00530000063534.a	ENSGT00940000165989	ENSGT00940000157946.e	ENSGT00940000156400.a	ENSGT00940000154003.A	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00390000009899.b.m	ENSGT00390000005529.b	ENSGT00940000153772.A	ENSGT00940000156878.i.b.b	ENSGT00390000016053	ENSGT00390000013208	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00980000199243	ENSGT00730000111591.b
Characiphysae_b	ANCESTRAL SPECIES	31	ENSGT00940000157983	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00530000063981.a.g	ENSGT00390000011648.a	ENSGT00390000007283.a	ENSGT00390000001969.b	ENSGT00940000164289.b	ENSGT00390000012875	ENSGT00530000063534.a	ENSGT00940000165989	ENSGT00940000157946.e	ENSGT00940000156400.a	ENSGT00940000154003.A	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00390000009899.b.m	ENSGT00390000005529.b	ENSGT00940000153772.A	ENSGT00940000156878.i.b.b	ENSGT00390000016053	ENSGT00390000013208	ENSGT01100000265550	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00980000199243
Characoidei	ANCESTRAL SPECIES	80	ENSGT00390000014448	ENSGT00940000157983	ENSGT00390000014443	ENSGT00390000004323.a	ENSGT00530000063981.a.g	ENSGT00390000011648.a	ENSGT00390000007283.a	ENSGT00390000001969.b	ENSGT00940000164289.b	ENSGT00390000012875	ENSGT00530000063534.a	ENSGT00940000157946.e	ENSGT00940000156400.a	ENSGT00940000154003.A	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00390000009899.b.m	ENSGT00390000005529.b	ENSGT00940000153772.A	ENSGT00940000156878.i.b.b	ENSGT00390000016053	ENSGT00390000013208	ENSGT01100000265550	ENSGT00940000160974.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00980000199243	ENSGT00730000111591.b
Red-bellied piranha	MODERN SPECIES	120	cradd (ENSPNAG00000009609)	socs2 (ENSPNAG00000009598)	ncaph2 (ENSPNAG00000009589)	sco2 (ENSPNAG00000009540)	PRR5 (ENSPNAG00000009517)	phtf2 (ENSPNAG00000009448)	TMEM60 (ENSPNAG00000009323)	RSBN1L (ENSPNAG00000009316)	ENSPNAG00000001308	GSAP (ENSPNAG00000009262)	ccdc146 (ENSPNAG00000009204)	fgl2a (ENSPNAG00000009177)	lrrc17 (ENSPNAG00000009167)	ENSPNAG00000009155	ENSPNAG00000009125	fam3c (ENSPNAG00000009111) #22	ppp6r2a (ENSPNAG00000006805)	dennd6b (ENSPNAG00000009061)	gcc1 (ENSPNAG00000008998)	lamtor4 (ENSPNAG00000008996)	atp6v1f (ENSPNAG00000008984)	ENSPNAG00000001274	ENSPNAG00000008966	ENSPNAG00000001260	cacna2d1a (ENSPNAG00000001242)	hgfa (ENSPNAG00000001217)	pax4 (ENSPNAG00000008826)	snd1 (ENSPNAG00000001206)	LRRC4 (ENSPNAG00000001186)	ENSPNAG00000001184	lepb (ENSPNAG00000008752)
Mexicana tetra	MODERN SPECIES	22	socs2 (ENSAMXG00000015948)	ncaph2 (ENSAMXG00000015963)	sco2 (ENSAMXG00000025118)	PRR5 (ENSAMXG00000031753)	phtf2 (ENSAMXG00000016006)	ENSAMXG00000041668	TMEM60 (ENSAMXG00000025119)	RSBN1L (ENSAMXG00000016045)	ENSAMXG00000016060	GSAP (ENSAMXG00000016075)	fgl2a (ENSAMXG00000040760)	ccdc146 (ENSAMXG00000016086)	lrrc17 (ENSAMXG00000016099)	CEP83 (ENSAMXG00000016112)	ENSAMXG00000016131	fam3c (ENSAMXG00000016139) #22	ppp6r2a (ENSAMXG00000016145)	dennd6b (ENSAMXG00000016154)	gcc1 (ENSAMXG00000041943)	ARF5 (ENSAMXG00000031774)	lamtor4 (ENSAMXG00000039103)	atp6v1f (ENSAMXG00000033343)	ENSAMXG00000035051	ENSAMXG00000016215	irf5 (ENSAMXG00000016223)	tnpo3 (ENSAMXG00000016236)	calua (ENSAMXG00000016267)	impdh1b (ENSAMXG00000016283)	ENSAMXG00000043105	ENSAMXG00000038561	hmg20a (ENSAMXG00000013048)
Electric eel	MODERN SPECIES	218							junba (ENSEEEG00000009780)	ENSEEEG00000009779	ENSEEEG00000009774	ENSEEEG00000009773	ENSEEEG00000009771	fgl2a (ENSEEEG00000009770)	lrrc17 (ENSEEEG00000009769)	CEP83 (ENSEEEG00000009760)	ENSEEEG00000009757	fam3c (ENSEEEG00000009755) #22	ppp6r2a (ENSEEEG00000009557)	dennd6b (ENSEEEG00000009517)	gcc1 (ENSEEEG00000009511)	ARF5 (ENSEEEG00000009408)	lamtor4 (ENSEEEG00000009405)	atp6v1f (ENSEEEG00000009402)	ENSEEEG00000009401	ENSEEEG00000009400	irf5 (ENSEEEG00000009399)	tnpo3 (ENSEEEG00000009397)	calua (ENSEEEG00000009393)	impdh1b (ENSEEEG00000008957)	ENSEEEG00000008951	lepb (ENSEEEG00000008949)	ENSEEEG00000008947
Channel catfish	MODERN SPECIES	5	chpt1 (ENSIPUG00000017031)	mybpc1 (ENSIPUG00000017099)	ENSIPUG00000017572	SPIC (ENSIPUG00000017583)	dnajb9b (ENSIPUG00000017594)	apaf1 (ENSIPUG00000017605)	anks1b (ENSIPUG00000017697)	ENSIPUG00000017802	uhrf1bp1l (ENSIPUG00000017811)	ptpn12 (ENSIPUG00000017852)	gsap (ENSIPUG00000017912)	ccdc146 (ENSIPUG00000017962)	fgl2a (ENSIPUG00000017981)	lrrc17 (ENSIPUG00000017992)	cep83 (ENSIPUG00000018002)	fam3c (ENSIPUG00000018023) #22	ppp6r2a (ENSIPUG00000018097)	dennd6b (ENSIPUG00000018134)	GCC1 (ENSIPUG00000018160)	ENSIPUG00000018167	ENSIPUG00000018184
Cyprinoidei	ANCESTRAL SPECIES	28	ENSGT00390000002793	ENSGT00950000182839.B.a.a.k	ENSGT00390000017990	ENSGT00940000156127	ENSGT00940000158409	ENSGT00940000155997.lb.a	ENSGT00940000157572.a.a	ENSGT00940000153544.b	ENSGT00390000012875	ENSGT00530000063534.a	ENSGT00940000165989	ENSGT00940000157946.e	ENSGT00940000156400.a	ENSGT00940000154003.A	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00390000009899.b.m	ENSGT00390000005529.b	ENSGT00940000153772.A	ENSGT00390000016053	ENSGT00390000013208	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00980000199243	ENSGT00730000111591.b	ENSGT00940000154156.c.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	437	ENSGT00940000156127.s	ENSGT00940000158409.`b	ENSGT00940000155997.lb.a.lb.b	ENSGT00940000157572.a.a.a	ENSGT00940000155997.lb.a.mb	ENSGT00940000153544.b.e	ENSGT00390000012875.c	ENSGT00530000063534.a	ENSGT00940000165989	ENSGT00390000012875.d	ENSGT00940000157946.e.d	ENSGT00990000209987	ENSGT00940000156400.a.a	ENSGT00940000154003.A.a	ENSGT01030000234563.a.a.c.a.a.a	ENSGT00950000183004.a.b.a.a.q #22	ENSGT00390000009899.b.m.c	ENSGT00390000005529.b.e	ENSGT00940000153772.A.j	ENSGT00940000181285.c	ENSGT00940000160974.a.b
Goldfish	MODERN SPECIES	33	napepld (ENSCARG00000016922)	cacna1c (ENSCARG00000017044)	dcp1b (ENSCARG00000019092)	CACNA2D4 (ENSCARG00000019247)	LRTM2 (ENSCARG00000022789)	stk38l (ENSCARG00000022790)	ENSCARG00000022798	ENSCARG00000022831	ccdc146 (ENSCARG00000022835)	ENSCARG00000022839	fgl2a (ENSCARG00000022842)	sinup (ENSCARG00000022852)	lrrc17 (ENSCARG00000022867)	CEP83 (ENSCARG00000022885)	ENSCARG00000022913	fam3c (ENSCARG00000022929) #22	ppp6r2a (ENSCARG00000022954)	dennd6b (ENSCARG00000023406)	gcc1 (ENSCARG00000023427)	lamtor4 (ENSCARG00000023435)	ENSCARG00000023449	ENSCARG00000023463	ENSCARG00000023471	ENSCARG00000023480	anks1b (ENSCARG00000023508)	apaf1 (ENSCARG00000023824)	avpr2l (ENSCARG00000025186)	dnajb9b (ENSCARG00000025200)	spic (ENSCARG00000025215)	ENSCARG00000025248	gnptab (ENSCARG00000025313)
Cyprininae_a	ANCESTRAL SPECIES	200	ENSGT00390000002793.c	ENSGT00950000182839.B.a.a.k.b	ENSGT00940000156127.s	ENSGT00940000158409.`b	ENSGT00940000155997.lb.a.lb.b	ENSGT00940000157572.a.a.a	ENSGT00940000155997.lb.a.mb	ENSGT00940000153544.b.e	ENSGT00390000012875.c	ENSGT00530000063534.a	ENSGT00940000157946.e.d	ENSGT00990000209987	ENSGT00940000156400.a.a	ENSGT00940000154003.A.a	ENSGT01030000234563.a.a.c.a.a.a	ENSGT00950000183004.a.b.a.a.q #22	ENSGT00390000009899.b.m.c	ENSGT00390000005529.b.e	ENSGT00940000153772.A.j	ENSGT00390000016053.f	ENSGT00390000013208.d	ENSGT00940000181285.c	ENSGT00940000160974.a.b	ENSGT00940000165748.a.a	ENSGT00940000155209.mb.a	ENSGT00940000156019.c.b.b	ENSGT00940000165785.b	ENSGT00940000165785.a.b	ENSGT00510000047270.k	ENSGT00940000159260.h.a	ENSGT00980000199243.b
Common carp reference	MODERN SPECIES	8	ENSCCRG00000059987	ENSCCRG00000003582	napepld (ENSCCRG00000077775)	cacna1c (ENSCCRG00000021334)	dcp1b (ENSCCRG00000013880)	CACNA2D4 (ENSCCRG00000013920)	ENSCCRG00000039900	ENSCCRG00000059636	stk38l (ENSCCRG00000014108)	ENSCCRG00000069404	fgl2a (ENSCCRG00000016688)	sinup (ENSCCRG00000039907)	lrrc17 (ENSCCRG00000039909)	ENSCCRG00000016668	ENSCCRG00000027405	fam3c (ENSCCRG00000077550) #22	ppp6r2a (ENSCCRG00000015059)	dennd6b (ENSCCRG00000029070)	gcc1 (ENSCCRG00000029079)	lamtor4 (ENSCCRG00000065087)	atp6v1f (ENSCCRG00000067176)	zgc:193726 (ENSCCRG00000041320)	ENSCCRG00000065209	ENSCCRG00000021128	cacna2d1a (ENSCCRG00000026836)	hgfa (ENSCCRG00000013706)	pax4 (ENSCCRG00000012269)	snd1 (ENSCCRG00000012258)	ENSCCRG00000075079	lepb (ENSCCRG00000008887)	ENSCCRG00000071275
Golden-line barbel	DUPLICATION
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	7	ints13 (ENSSGRG00000041790)	rassf8b (ENSSGRG00000041783)	napepld (ENSSGRG00000041781)	ENSSGRG00000041780	cacna1c (ENSSGRG00000041723)	dcp1b (ENSSGRG00000041683)	LRTM2 (ENSSGRG00000041682)	stk38l (ENSSGRG00000041187)	ENSSGRG00000041165	ENSSGRG00000041160	ccdc146 (ENSSGRG00000041157)	fgl2a (ENSSGRG00000041156)	lrrc17 (ENSSGRG00000041152)	CEP83 (ENSSGRG00000041150)	ENSSGRG00000041144	fam3c (ENSSGRG00000041139) #22	fam3c (ENSSGRG00000041138) #22	ppp6r2a (ENSSGRG00000040968)	dennd6b (ENSSGRG00000040087)	gcc1 (ENSSGRG00000039997)	lamtor4 (ENSSGRG00000039995)	atp6v1f (ENSSGRG00000039993)	ENSSGRG00000039991	ENSSGRG00000039989	ENSSGRG00000039986	cacna2d1a (ENSSGRG00000039984)	hgfa (ENSSGRG00000039979)	pax4 (ENSSGRG00000039976)	LRRC4 (ENSSGRG00000039971)	snd1 (ENSSGRG00000038660)	lepb (ENSSGRG00000038636)
Golden-line barbel	MODERN SPECIES	596						tcf7 (ENSSGRG00000040289)	vdac1 (ENSSGRG00000040338)	C5orf15 (ENSSGRG00000040429)	stk38l (ENSSGRG00000040438)	ENSSGRG00000040618	ccdc146 (ENSSGRG00000040619)	fgl2a (ENSSGRG00000040621)	sinup (ENSSGRG00000040622)	lrrc17 (ENSSGRG00000040623)	CEP83 (ENSSGRG00000040625)	fam3c (ENSSGRG00000040629) #22	ppp6r2a (ENSSGRG00000040649)	dennd6b (ENSSGRG00000040979)	gcc1 (ENSSGRG00000041614)	lamtor4 (ENSSGRG00000041616)	atp6v1f (ENSSGRG00000041618)	ENSSGRG00000041624	ENSSGRG00000041625	ENSSGRG00000041626	hgfa (ENSSGRG00000041633)	ENSSGRG00000041648	snd1 (ENSSGRG00000041655)	LRRC4 (ENSSGRG00000041752)
Golden-line barbel	MODERN SPECIES	7	rassf8b (ENSSGRG00000041783)	napepld (ENSSGRG00000041781)	ENSSGRG00000041780	cacna1c (ENSSGRG00000041723)	dcp1b (ENSSGRG00000041683)	LRTM2 (ENSSGRG00000041682)	stk38l (ENSSGRG00000041187)	ENSSGRG00000041165	ENSSGRG00000041160	ccdc146 (ENSSGRG00000041157)	fgl2a (ENSSGRG00000041156)	lrrc17 (ENSSGRG00000041152)	CEP83 (ENSSGRG00000041150)	ENSSGRG00000041144	fam3c (ENSSGRG00000041139) #22	fam3c (ENSSGRG00000041138) #22	ppp6r2a (ENSSGRG00000040968)	dennd6b (ENSSGRG00000040087)	gcc1 (ENSSGRG00000039997)	lamtor4 (ENSSGRG00000039995)	atp6v1f (ENSSGRG00000039993)	ENSSGRG00000039991	ENSSGRG00000039989	ENSSGRG00000039986	cacna2d1a (ENSSGRG00000039984)	hgfa (ENSSGRG00000039979)	pax4 (ENSSGRG00000039976)	LRRC4 (ENSSGRG00000039971)	snd1 (ENSSGRG00000038660)	lepb (ENSSGRG00000038636)	ENSSGRG00000038635
Cyprininae	ANCESTRAL SPECIES	44												ENSGT00940000157946.e.c	ENSGT00940000156400.a.b	ENSGT00940000154003.A.b	ENSGT01030000234563.a.a.c.a.a.b	ENSGT00950000183004.a.b.a.a.r #22	ENSGT00390000009899.b.m.d	ENSGT00390000005529.b.f	ENSGT00940000153772.A.i	ENSGT00390000016053	ENSGT00390000013208	ENSGT00940000181285.d	ENSGT00940000160974.a.a	ENSGT00940000165748.a.b	ENSGT00940000155209.mb.b	ENSGT00940000156019.c.b.a	ENSGT00940000165785.a.a	ENSGT00510000047270.l	ENSGT00940000159260.h.b	ENSGT00980000199243.a	ENSGT00730000111591.b.j
Goldfish	MODERN SPECIES	21	nav3 (ENSCARG00000017765)	ENSCARG00000018015	ENSCARG00000018031	ENSCARG00000018046	ints13 (ENSCARG00000018087)	rassf8b (ENSCARG00000018184)	cacna1c (ENSCARG00000018252)	dcp1b (ENSCARG00000019355)	LRTM2 (ENSCARG00000019365)	stk38l (ENSCARG00000019367)	ENSCARG00000019374	fgl2a (ENSCARG00000019383)	lrrc17 (ENSCARG00000019387)	CEP83 (ENSCARG00000019402)	ENSCARG00000019470	fam3c (ENSCARG00000019485) #22	ppp6r2a (ENSCARG00000019544)	dennd6b (ENSCARG00000020128)	gcc1 (ENSCARG00000020542)	lamtor4 (ENSCARG00000020548)	atp6v1f (ENSCARG00000020554)	ENSCARG00000020558	ENSCARG00000020565	ENSCARG00000020577	cacna2d1a (ENSCARG00000020628)	hgfa (ENSCARG00000020770)	pax4 (ENSCARG00000020826)	snd1 (ENSCARG00000020920)	LRRC4 (ENSCARG00000024082)	ENSCARG00000024086	impdh1b (ENSCARG00000024123)
Cyprininae_a	ANCESTRAL SPECIES	223											ENSGT00940000165989	ENSGT00940000157946.e.c	ENSGT00940000156400.a.b	ENSGT00940000154003.A.b	ENSGT01030000234563.a.a.c.a.a.b	ENSGT00950000183004.a.b.a.a.r #22	ENSGT00390000009899.b.m.d	ENSGT00390000005529.b.f	ENSGT00940000153772.A.i	ENSGT00390000016053.e	ENSGT00390000013208.c	ENSGT00940000181285.d	ENSGT00940000160974.a.a	ENSGT00940000165748.a.b	ENSGT00940000155209.mb.b	ENSGT00940000156019.c.b.a	ENSGT00940000165785.a.a	ENSGT00510000047270.l	ENSGT00940000159260.h.b	ENSGT00980000199243.a	ENSGT00730000111591.b.j
Common carp reference	MODERN SPECIES	36	ENSCCRG00000024630	ENSCCRG00000076072	ENSCCRG00000064902	cacna1c (ENSCCRG00000079889)	dcp1b (ENSCCRG00000016759)	ENSCCRG00000055650	LRTM2 (ENSCCRG00000065045)	stk38l (ENSCCRG00000016711)	ENSCCRG00000059219	ENSCCRG00000016692	fgl2a (ENSCCRG00000064254)	lrrc17 (ENSCCRG00000016681)	ENSCCRG00000027294	ENSCCRG00000016657	ppp6r2a (ENSCCRG00000028127)	fam3c (ENSCCRG00000068515) #22	dennd6b (ENSCCRG00000005996)	gcc1 (ENSCCRG00000065502)	lamtor4 (ENSCCRG00000059015)	atp6v1f (ENSCCRG00000069956)	ENSCCRG00000041316	ENSCCRG00000070693	cacna2d1a (ENSCCRG00000016621)	hgfa (ENSCCRG00000039027)	pax4 (ENSCCRG00000013693)	snd1 (ENSCCRG00000012428)	ENSCCRG00000074920	lepb (ENSCCRG00000008889)	ENSCCRG00000042593	impdh1b (ENSCCRG00000076447)	ENSCCRG00000021005
Golden-line barbel	MODERN SPECIES	3899																fam3c (ENSSGRG00000008458) #22
Zebrafish	MODERN SPECIES	19	ints13 (ENSDARG00000011764)	napepld (ENSDARG00000009252)	cacna1c (ENSDARG00000008398)	dcp1b (ENSDARG00000045484)	CACNA2D4 (ENSDARG00000026855)	LRTM2 (ENSDARG00000045483)	ENSDARG00000103810	stk38l (ENSDARG00000045482)	GSAP (ENSDARG00000045481)	fgl2a (ENSDARG00000019861)	ccdc146 (ENSDARG00000004794)	sinup (ENSDARG00000017163)	lrrc17 (ENSDARG00000037960)	CEP83 (ENSDARG00000101236)	ENSDARG00000056145	fam3c (ENSDARG00000056152) #22	ppp6r2a (ENSDARG00000045540)	dennd6b (ENSDARG00000011605)	gcc1 (ENSDARG00000045541)	lamtor4 (ENSDARG00000045542)	atp6v1f (ENSDARG00000045543)	zgc:193726 (ENSDARG00000104301)	ENSDARG00000106138	drd4-rs (ENSDARG00000001912)	ENSDARG00000111326	cacna2d1a (ENSDARG00000014804)	hgfa (ENSDARG00000045544)	pax4 (ENSDARG00000021336)	LRRC4 (ENSDARG00000069402)	snd1 (ENSDARG00000006766)	ENSDARG00000094118
Clupeiformes	ANCESTRAL SPECIES	87		ENSGT01050000244850.A.a.o.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT00940000154003.A	ENSGT00940000158466	ENSGT00950000182973.a.c.b	ENSGT00940000156720	ENSGT00990000207548	ENSGT00390000013715	ENSGT00950000183017.b.b.a.a	ENSGT01070000253775.a.d.a.a.a.a	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00510000047522	ENSGT00950000183004.a.b.b ##22	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00390000010053	ENSGT00390000011897	ENSGT00940000159941	ENSGT00940000157444	ENSGT00940000160986	ENSGT00940000157238.a	ENSGT00390000004860	ENSGT00620000089227	ENSGT00940000156494	ENSGT00940000157928	ENSGT00940000155306.a	ENSGT00940000157869.e.b	ENSGT00940000155146	ENSGT00390000017669
Denticle herring	MODERN SPECIES	6	DEPDC4 (ENSDCDG00000030889)	scyl2 (ENSDCDG00000030867)	ENSDCDG00000030860	si:ch211-244b2.4 (ENSDCDG00000030854)	st8sia1 (ENSDCDG00000030847)	tnni1d (ENSDCDG00000030845)	ENSDCDG00000030840	nr2c1 (ENSDCDG00000030829)	ndufa12 (ENSDCDG00000030824)	tmcc3 (ENSDCDG00000030821)	ENSDCDG00000030480	slc26a4 (ENSDCDG00000030416)	slc26a3.1 (ENSDCDG00000030168)	cbll1 (ENSDCDG00000030160)	ENSDCDG00000030158	fam3c (ENSDCDG00000030157) #22	btg1 (ENSDCDG00000030156)	ENSDCDG00000030155	dcn (ENSDCDG00000030138)	lum (ENSDCDG00000030135)	kera (ENSDCDG00000030133)	ENSDCDG00000030123	epyc (ENSDCDG00000030120)	si:dkeyp-38g8.5 (ENSDCDG00000030115)	dclre1c (ENSDCDG00000028734)	hspa14 (ENSDCDG00000028503)	cdnf (ENSDCDG00000028492)	SHANK3 (ENSDCDG00000028485)	TYMP (ENSDCDG00000028454)	lsm8 (ENSDCDG00000028445) #30	ENSDCDG00000028442
Euteleosteomorpha	ANCESTRAL SPECIES	60	ENSGT00440000033504.B.b	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT00990000205707	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00390000018647
Acanthomorphata	ANCESTRAL SPECIES	67	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.d	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00390000014507.b	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00940000171480	ENSGT00940000164581.B	ENSGT00880000138031
Euacanthomorphacea	ANCESTRAL SPECIES	18	ENSGT00940000155867.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00390000014507.b	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b
Percomorphaceae	ANCESTRAL SPECIES	19	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00390000014507.b	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b
Tiger tail seahorse	MODERN SPECIES	260											ENSHCOG00000012077	ENSHCOG00000012088	impdh1b (ENSHCOG00000012104)	impdh1b (ENSHCOG00000012116)	ENSHCOG00000012123	fam3c (ENSHCOG00000012163) #22	btg1 (ENSHCOG00000012176)	ENSHCOG00000012187	dcn (ENSHCOG00000012199)	lum (ENSHCOG00000012212)	kera (ENSHCOG00000012222)	epyc (ENSHCOG00000012307)	si:dkeyp-38g8.5 (ENSHCOG00000012324)	psmc2 (ENSHCOG00000012361)	slc26a5 (ENSHCOG00000012374)	ENSHCOG00000012404	strap (ENSHCOG00000012449)	spx (ENSHCOG00000012470)	ENSHCOG00000012489	gys2 (ENSHCOG00000012532)	LDHB (ENSHCOG00000000598)
Percomorphaceae_B	ANCESTRAL SPECIES	21	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835
Percomorphaceae_C	ANCESTRAL SPECIES	22	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835
Eupercaria	ANCESTRAL SPECIES	21	ENSGT01040000240400.c.b.a.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Tetraodontidae	ANCESTRAL SPECIES	17	ENSGT00440000033504.B.b	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000156759.b	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00390000015968
Fugu	MODERN SPECIES	9	prmt8b (ENSTRUG00000015128)	tspan11 (ENSTRUG00000015081)	ENSTRUG00000029430	sema3aa (ENSTRUG00000014935)	ENSTRUG00000014864	cacna2d1a (ENSTRUG00000014542)	hgfa (ENSTRUG00000014427)	ENSTRUG00000014412	ENSTRUG00000020292	LRRC4 (ENSTRUG00000014390)	snd1 (ENSTRUG00000014067)	si:dkey-5i3.5 (ENSTRUG00000024951)	ENSTRUG00000024191	ENSTRUG00000026379	impdh1b (ENSTRUG00000014021)	fam3c (ENSTRUG00000013911) #22	btg1 (ENSTRUG00000032692)	ENSTRUG00000013884	dcn (ENSTRUG00000013771)	lum (ENSTRUG00000025547)	kera (ENSTRUG00000013697)	epyc (ENSTRUG00000013658)	ENSTRUG00000022466	scyl2 (ENSTRUG00000013597)	ENSTRUG00000013501	tcp11l2 (ENSTRUG00000013371)	apaf1 (ENSTRUG00000013192)	anks1b (ENSTRUG00000013069)	uhrf1bp1l (ENSTRUG00000012937)	ENSTRUG00000012913	ENSTRUG00000023311
Tetraodon	MODERN SPECIES	11	CRACR2A (ENSTNIG00000011027)	ENSTNIG00000001448	ENSTNIG00000011026	tspan11 (ENSTNIG00000011025)	sema3aa (ENSTNIG00000011024)	ENSTNIG00000011023	cacna2d1a (ENSTNIG00000011022)	hgfa (ENSTNIG00000011021)	ENSTNIG00000000660	ENSTNIG00000011020	LRRC4 (ENSTNIG00000011018)	snd1 (ENSTNIG00000011019)	si:dkey-5i3.5 (ENSTNIG00000011017)	impdh1b (ENSTNIG00000011016)	ENSTNIG00000011015	fam3c (ENSTNIG00000011014) #22	btg1 (ENSTNIG00000011013)	dcn (ENSTNIG00000011012)	lum (ENSTNIG00000001124)	kera (ENSTNIG00000011011)	epyc (ENSTNIG00000011010)	ENSTNIG00000011009	tcp11l2 (ENSTNIG00000011008)	apaf1 (ENSTNIG00000011007)	anks1b (ENSTNIG00000018849)	uhrf1bp1l (ENSTNIG00000011426)	ENSTNIG00000011425	ENSTNIG00000000798	arfgap3 (ENSTNIG00000011424)	pacsin2 (ENSTNIG00000011423)	ttll1 (ENSTNIG00000011422)
Eupecaria_A	ANCESTRAL SPECIES	21	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b.c	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Ballan wrasse	MODERN SPECIES	288	syt10 (ENSLBEG00000021731)	tnnt2c (ENSLBEG00000021670)	ENSLBEG00000021657	IKBIP (ENSLBEG00000021638)	arfgap3 (ENSLBEG00000021563)	pacsin2 (ENSLBEG00000021510)	ttll1 (ENSLBEG00000021464)	ENSLBEG00000021449	mcat (ENSLBEG00000021435)	ENSLBEG00000021405	ENSLBEG00000021382	ENSLBEG00000021362	washc3 (ENSLBEG00000021335)	dram1 (ENSLBEG00000021279)	ENSLBEG00000021230	fam3c (ENSLBEG00000021194) #22	btg1 (ENSLBEG00000021173)
Eupecaria_B	ANCESTRAL SPECIES	21	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b.c	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Perciformes	ANCESTRAL SPECIES	18	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b.c	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000156759.b	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Perciformes_a	ANCESTRAL SPECIES	19	ENSGT00440000033504.B.b	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b.c	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000156759.b	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Channel bull blenny	MODERN SPECIES	15	prmt8b (ENSCGOG00000013706)	tspan11 (ENSCGOG00000013698)	sema3aa (ENSCGOG00000011836)	ENSCGOG00000022327	cacna2d1a (ENSCGOG00000022290)	hgfa (ENSCGOG00000022277)	ENSCGOG00000022275	ENSCGOG00000022274	LRRC4 (ENSCGOG00000022273)	snd1 (ENSCGOG00000021564)	ENSCGOG00000021531	si:dkey-5i3.5 (ENSCGOG00000021529)	ENSCGOG00000021528	impdh1b (ENSCGOG00000019758)	ENSCGOG00000019702	fam3c (ENSCGOG00000019696) #22	btg1 (ENSCGOG00000019694)	ENSCGOG00000019675	dcn (ENSCGOG00000019639)	lum (ENSCGOG00000019634)	kera (ENSCGOG00000019628)	epyc (ENSCGOG00000019622)	si:dkeyp-38g8.5 (ENSCGOG00000019621)	ENSCGOG00000019619	washc3 (ENSCGOG00000019618)	ENSCGOG00000019606	ENSCGOG00000019585	ENSCGOG00000019583	mcat (ENSCGOG00000019581)	ttll1 (ENSCGOG00000019575)	pacsin2 (ENSCGOG00000019377)
Pike perch	MODERN SPECIES	28	CRACR2A (ENSSLUG00000001965)	prmt8b (ENSSLUG00000001990)	ENSSLUG00000002065	tspan11 (ENSSLUG00000002072)	sema3aa (ENSSLUG00000002250)	ENSSLUG00000004427	cacna2d1a (ENSSLUG00000004742)	hgfa (ENSSLUG00000009514)	ENSSLUG00000009539	snd1 (ENSSLUG00000009620)	LRRC4 (ENSSLUG00000011583)	si:dkey-5i3.5 (ENSSLUG00000011591)	PRRT4 (ENSSLUG00000011597)	impdh1b (ENSSLUG00000011693)	ENSSLUG00000013391	fam3c (ENSSLUG00000013431) #22	btg1 (ENSSLUG00000013451)	ENSSLUG00000013470	dcn (ENSSLUG00000013521)	lum (ENSSLUG00000013524)	kera (ENSSLUG00000013525)	epyc (ENSSLUG00000013536)	si:dkeyp-38g8.5 (ENSSLUG00000013540)	si:ch211-244b2.4 (ENSSLUG00000013543)	ENSSLUG00000013547	scyl2 (ENSSLUG00000013558)	DEPDC4 (ENSSLUG00000013571)	FUT9 (ENSSLUG00000013575)	tcp11l2 (ENSSLUG00000013639)	apaf1 (ENSSLUG00000013724)	anks1b (ENSSLUG00000014070)
Cottioidei	ANCESTRAL SPECIES	19	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b.c	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000156759.b	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00940000171480	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710
Lumpfish	MODERN SPECIES	15	ENSCLMG00005016196	ASCL4 (ENSCLMG00005016191)	ENSCLMG00005016190	sema3aa (ENSCLMG00005015353)	ENSCLMG00005015345	cacna2d1a (ENSCLMG00005015343)	ENSCLMG00005015342	pax4 (ENSCLMG00005015261)	LRRC4 (ENSCLMG00005015257)	snd1 (ENSCLMG00005012045)	ENSCLMG00005012035	ENSCLMG00005012034	ENSCLMG00005012033	impdh1b (ENSCLMG00005010639)	ENSCLMG00005010623	fam3c (ENSCLMG00005010620) #22	btg1 (ENSCLMG00005010618)	ENSCLMG00005010615	dcn (ENSCLMG00005010613)	lum (ENSCLMG00005010610)	kera (ENSCLMG00005010608)	epyc (ENSCLMG00005010607)	si:dkeyp-38g8.5 (ENSCLMG00005010605)	ENSCLMG00005010604	ENSCLMG00005010600	ENSCLMG00005010584	ENSCLMG00005022740	FUT9 (ENSCLMG00005022735)	tcp11l2 (ENSCLMG00005022733)	ppp1r12a (ENSCLMG00005022725)	pawr (ENSCLMG00005022721)
Stickleback	MODERN SPECIES	3	prmt8b (ENSGACG00000019772)	ENSGACG00000019776	tspan11 (ENSGACG00000019777)	sema3aa (ENSGACG00000019783)	ENSGACG00000019785	cacna2d1a (ENSGACG00000019787)	ENSGACG00000019789	hgfa (ENSGACG00000019791)	ENSGACG00000019792	snd1 (ENSGACG00000019793)	LRRC4 (ENSGACG00000019795)	si:dkey-5i3.5 (ENSGACG00000019796)	impdh1b (ENSGACG00000019797)	ENSGACG00000019800	ENSGACG00000019801	fam3c (ENSGACG00000019804) #22	btg1 (ENSGACG00000019805)	dcn (ENSGACG00000019806)	lum (ENSGACG00000019814)	kera (ENSGACG00000019816)	epyc (ENSGACG00000019817)	si:ch211-244b2.4 (ENSGACG00000019820)	ENSGACG00000019823	scyl2 (ENSGACG00000019825)	ENSGACG00000019827	FUT9 (ENSGACG00000019829)	FUT9 (ENSGACG00000019830)	FUT9 (ENSGACG00000019831)	ENSGACG00000019832	FUT9 (ENSGACG00000019833)	FUT9 (ENSGACG00000019835)
Eupecaria_C	ANCESTRAL SPECIES	18	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b.c	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Gilthead seabream	MODERN SPECIES	5	ENSSAUG00010027443	ENSSAUG00010027444	tspan11 (ENSSAUG00010027445)	sema3aa (ENSSAUG00010027449)	ENSSAUG00010027511	cacna2d1a (ENSSAUG00010027525)	hgfa (ENSSAUG00010027570)	pax4 (ENSSAUG00010027572)	snd1 (ENSSAUG00010027589)	LRRC4 (ENSSAUG00010027596)	ENSSAUG00010027598	si:dkey-5i3.5 (ENSSAUG00010011949)	ENSSAUG00010011954	impdh1b (ENSSAUG00010011966)	ENSSAUG00010012091	fam3c (ENSSAUG00010012092) #22	btg1 (ENSSAUG00010012097)	ENSSAUG00010012099	dcn (ENSSAUG00010012101)	lum (ENSSAUG00010012103)	kera (ENSSAUG00010012104)	epyc (ENSSAUG00010012106)	si:dkeyp-38g8.5 (ENSSAUG00010012108)	si:ch211-244b2.4 (ENSSAUG00010012111)	ENSSAUG00010012115	scyl2 (ENSSAUG00010012122)	ENSSAUG00010012145	FUT9 (ENSSAUG00010012147)	ENSSAUG00010012149	FUT9 (ENSSAUG00010012150)	FUT9 (ENSSAUG00010012151)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	22	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b.c	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00940000164581.A.a.a	ENSGT00940000164581.B	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Large yellow croaker	MODERN SPECIES	491											ENSLCRG00005006167	si:dkey-5i3.5 (ENSLCRG00005006168)	ENSLCRG00005006169	impdh1b (ENSLCRG00005006179)	ENSLCRG00005006296	fam3c (ENSLCRG00005006303) #22	btg1 (ENSLCRG00005006306)	ENSLCRG00005006307	dcn (ENSLCRG00005006311)	lum (ENSLCRG00005006313)	kera (ENSLCRG00005006315)	epyc (ENSLCRG00005006316)	si:ch211-244b2.4 (ENSLCRG00005006321)	si:ch211-244b2.3 (ENSLCRG00005006324)	scyl2 (ENSLCRG00005006328)	ENSLCRG00005006355	ENSLCRG00005006364	tcp11l2 (ENSLCRG00005006367)	apaf1 (ENSLCRG00005006390)	anks1b (ENSLCRG00005006505)	uhrf1bp1l (ENSLCRG00005006536)
Percomorphaceae_D	ANCESTRAL SPECIES	22	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT00990000205707	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835
Anabantaria	ANCESTRAL SPECIES	21	ENSGT00940000161249	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000156759.b	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT00990000205707	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a
Zig-zag eel	MODERN SPECIES	15	prmt8b (ENSMAMG00000011397)	tspan11 (ENSMAMG00000027467)	sema3aa (ENSMAMG00000011440)	ENSMAMG00000024590	ENSMAMG00000011477	cacna2d1a (ENSMAMG00000011694)	hgfa (ENSMAMG00000011726)	ENSMAMG00000024898	snd1 (ENSMAMG00000011739)	ENSMAMG00000011765	ENSMAMG00000011786	ENSMAMG00000011806	ENSMAMG00000011818	ENSMAMG00000011828	ENSMAMG00000011982	ENSMAMG00000012008 #22	btg1 (ENSMAMG00000012039)	ENSMAMG00000012054	dcn (ENSMAMG00000012078)	lum (ENSMAMG00000012085)	kera (ENSMAMG00000012100)	epyc (ENSMAMG00000012105)	si:ch211-244b2.4 (ENSMAMG00000012121)	ENSMAMG00000026388	ENSMAMG00000012148	ENSMAMG00000012235	ENSMAMG00000012270	apaf1 (ENSMAMG00000012291)	ENSMAMG00000012379	ENSMAMG00000012493	uhrf1bp1l (ENSMAMG00000012506)
Anabantoidei	ANCESTRAL SPECIES	21	ENSGT01040000240400.c.b.a.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000156759.b	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT00990000205707	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b	ENSGT00950000183116.a.a
Climbing perch	MODERN SPECIES	14	ENSATEG00000018052	ENSATEG00000018086	tspan11 (ENSATEG00000027100)	ENSATEG00000028344	ENSATEG00000025588	cacna2d1a (ENSATEG00000018264)	hgfa (ENSATEG00000018339)	ENSATEG00000018371	snd1 (ENSATEG00000018475)	ENSATEG00000018557	ENSATEG00000018588	ENSATEG00000029683	ENSATEG00000018613	ENSATEG00000018624	ENSATEG00000018692	ENSATEG00000018715 #22	btg1 (ENSATEG00000027464)	ENSATEG00000018736	dcn (ENSATEG00000018748)	lum (ENSATEG00000018779)	kera (ENSATEG00000018788)	epyc (ENSATEG00000018806)	si:ch211-244b2.4 (ENSATEG00000018837)	si:ch211-244b2.3 (ENSATEG00000018871)	scyl2 (ENSATEG00000018903)	ENSATEG00000018962	ENSATEG00000018990	apaf1 (ENSATEG00000019013)	ENSATEG00000019046	ENSATEG00000019162	uhrf1bp1l (ENSATEG00000019174)
Siamese fighting fish	MODERN SPECIES	20	CRACR2A (ENSBSLG00000026509)	prmt8b (ENSBSLG00000026516)	ENSBSLG00000026529	tspan11 (ENSBSLG00000026530)	sema3aa (ENSBSLG00000026538)	cacna2d1a (ENSBSLG00000026569)	hgfa (ENSBSLG00000026581)	ENSBSLG00000026582	snd1 (ENSBSLG00000008385)	LRRC4 (ENSBSLG00000009577)	si:dkey-5i3.5 (ENSBSLG00000009589)	PRRT4 (ENSBSLG00000009687)	impdh1b (ENSBSLG00000009792)	ENSBSLG00000010306	ENSBSLG00000010315	fam3c (ENSBSLG00000010343) #22	btg1 (ENSBSLG00000010351)	ENSBSLG00000010590	dcn (ENSBSLG00000010636)	lum (ENSBSLG00000010713)	kera (ENSBSLG00000010731)	epyc (ENSBSLG00000010748)	si:ch211-244b2.4 (ENSBSLG00000010787)	ENSBSLG00000010862	scyl2 (ENSBSLG00000010899)	ENSBSLG00000010973	tcp11l2 (ENSBSLG00000010985)	apaf1 (ENSBSLG00000011042)	anks1b (ENSBSLG00000011808)	uhrf1bp1l (ENSBSLG00000012485)	ENSBSLG00000012696
Carangaria	ANCESTRAL SPECIES	22	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT00990000205707	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835
Carangaria_A	ANCESTRAL SPECIES	21	ENSGT01040000240400.c.b.a.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Barramundi perch	MODERN SPECIES	320												ENSLCAG00010015427	impdh1b (ENSLCAG00010015454)	ENSLCAG00010015589	ENSLCAG00010015592	fam3c (ENSLCAG00010015595) #22	btg1 (ENSLCAG00010015599)	ENSLCAG00010015602	dcn (ENSLCAG00010015605)	lum (ENSLCAG00010015609)	kera (ENSLCAG00010015612)	epyc (ENSLCAG00010015616)	si:ch211-244b2.4 (ENSLCAG00010015621)	ENSLCAG00010015627	scyl2 (ENSLCAG00010015638)	ENSLCAG00010015660	ft1 (ENSLCAG00010015665)	tcp11l2 (ENSLCAG00010015670)	apaf1 (ENSLCAG00010015728)
Seriola	ANCESTRAL SPECIES	9	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000156759.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Yellowtail amberjack	MODERN SPECIES	2783											ENSSLDG00000020226	si:dkey-5i3.5 (ENSSLDG00000020234)	ENSSLDG00000020241	impdh1b (ENSSLDG00000020252)	ENSSLDG00000020323	fam3c (ENSSLDG00000020374) #22	btg1 (ENSSLDG00000020401)	ENSSLDG00000020414	dcn (ENSSLDG00000020428)	lum (ENSSLDG00000020452)	kera (ENSSLDG00000020461)	epyc (ENSSLDG00000020475)	si:dkeyp-38g8.5 (ENSSLDG00000020484)	si:ch211-244b2.4 (ENSSLDG00000020508)	ENSSLDG00000020544	scyl2 (ENSSLDG00000020602)	DEPDC4 (ENSSLDG00000020699)	FUT9 (ENSSLDG00000020719)	FUT9 (ENSSLDG00000020741)	tcp11l2 (ENSSLDG00000020756)	apaf1 (ENSSLDG00000020771)
Greater amberjack	MODERN SPECIES	60	ENSSDUG00000003059	tspan11 (ENSSDUG00000003042)	sema3aa (ENSSDUG00000002963)	ENSSDUG00000002932	ENSSDUG00000002909	cacna2d1a (ENSSDUG00000002864)	hgfa (ENSSDUG00000002813)	ENSSDUG00000002799	LRRC4 (ENSSDUG00000002786)	snd1 (ENSSDUG00000002699)	ENSSDUG00000002653	si:dkey-5i3.5 (ENSSDUG00000002645)	ENSSDUG00000002636	impdh1b (ENSSDUG00000002584)	ENSSDUG00000002506	fam3c (ENSSDUG00000002419) #22	btg1 (ENSSDUG00000002395)	dcn (ENSSDUG00000002362)	ENSSDUG00000002068	lum (ENSSDUG00000002031)	kera (ENSSDUG00000002021)	epyc (ENSSDUG00000002000)	si:dkeyp-38g8.5 (ENSSDUG00000001977)	si:ch211-244b2.4 (ENSSDUG00000001958)	si:ch211-244b2.3 (ENSSDUG00000001944)	scyl2 (ENSSDUG00000001846)	ENSSDUG00000001819	FUT9 (ENSSDUG00000001785)	FUT9 (ENSSDUG00000001739)	tcp11l2 (ENSSDUG00000001701)	apaf1 (ENSSDUG00000001603)
Pleuronectoidei	ANCESTRAL SPECIES	16	ENSGT00940000161249	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT00990000205707	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT00940000164581.B	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b.m	ENSGT00940000157835	ENSGT00940000157710
Turbot	MODERN SPECIES	11	prmt8b (ENSSMAG00000001331)	sema3aa (ENSSMAG00000001436)	ENSSMAG00000001530	cacna2d1a (ENSSMAG00000001768)	hgfa (ENSSMAG00000001813)	ENSSMAG00000001900	snd1 (ENSSMAG00000001932)	ENSSMAG00000002020	ENSSMAG00000028564	ENSSMAG00000002041	ENSSMAG00000024437	ENSSMAG00000002059	ENSSMAG00000025577	ENSSMAG00000002204	ENSSMAG00000002216	ENSSMAG00000002244 #22	btg1 (ENSSMAG00000034290)	ENSSMAG00000002295	dcn (ENSSMAG00000002300)	lum (ENSSMAG00000002317)	kera (ENSSMAG00000002343)	epyc (ENSSMAG00000002361)	si:dkeyp-38g8.5 (ENSSMAG00000002384)	si:ch211-244b2.4 (ENSSMAG00000002425)	si:ch211-244b2.3 (ENSSMAG00000002442)	scyl2 (ENSSMAG00000002554)	ENSSMAG00000002674	ENSSMAG00000002702	ENSSMAG00000002712	apaf1 (ENSSMAG00000002753)	ENSSMAG00000002919
Tongue sole	MODERN SPECIES	18	ABCF3 (ENSCSEG00000006154)	LRCH3 (ENSCSEG00000006184)	rpl35a (ENSCSEG00000006207)	rnpepl1 (ENSCSEG00000006216)	ENSCSEG00000006219	mmp23bb (ENSCSEG00000006231)	SERP1 (ENSCSEG00000006236)	eif2a (ENSCSEG00000006247)	tsen34 (ENSCSEG00000006278)	clrn1 (ENSCSEG00000006287)	ENSCSEG00000006289	si:dkey-5i3.5 (ENSCSEG00000006293)	ENSCSEG00000006297	impdh1b (ENSCSEG00000006303)	ENSCSEG00000006326	fam3c (ENSCSEG00000006349) #22	btg1 (ENSCSEG00000006365)	ENSCSEG00000006371	dcn (ENSCSEG00000006390)	lum (ENSCSEG00000006414)	kera (ENSCSEG00000006422)	ENSCSEG00000006424	epyc (ENSCSEG00000006428)	si:dkeyp-38g8.5 (ENSCSEG00000006433)	ENSCSEG00000006438	scyl2 (ENSCSEG00000006450)	FUT9 (ENSCSEG00000006483)	FUT9 (ENSCSEG00000006487)	FUT9 (ENSCSEG00000006489)	tcp11l2 (ENSCSEG00000006496)	apaf1 (ENSCSEG00000006505)
Ovalentaria	ANCESTRAL SPECIES	22	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.g.b
Atherinomorphae	ANCESTRAL SPECIES	21	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Cyprinodontiformes	ANCESTRAL SPECIES	19	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Aplocheiloidei	ANCESTRAL SPECIES	14	ENSGT00440000033504.B.b	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Mangrove rivulus	MODERN SPECIES	19											ENSKMAG00000008762	si:dkey-5i3.5 (ENSKMAG00000008778)	ENSKMAG00000008787	impdh1b (ENSKMAG00000008802)	ENSKMAG00000008842	fam3c (ENSKMAG00000008875) #22	btg1 (ENSKMAG00000008916)	ENSKMAG00000008974	dcn (ENSKMAG00000009180)	lum (ENSKMAG00000009216)	kera (ENSKMAG00000009228)	epyc (ENSKMAG00000009247)	si:dkeyp-38g8.5 (ENSKMAG00000009306)	si:ch211-244b2.4 (ENSKMAG00000009331)	si:ch211-244b2.3 (ENSKMAG00000009347)	scyl2 (ENSKMAG00000009396)	ENSKMAG00000009476	tcp11l2 (ENSKMAG00000009492)	apaf1 (ENSKMAG00000009512)	anks1b (ENSKMAG00000009595)	uhrf1bp1l (ENSKMAG00000009835)
Turquoise killifish	MODERN SPECIES	1610	ENSNFUG00015002734	TSPAN11 (ENSNFUG00015002739)	SEMA3AA (ENSNFUG00015002856)	ENSNFUG00015003399	ENSNFUG00015003423	cacna2d1a (ENSNFUG00015003476)	hgfa (ENSNFUG00015003689)	pax4 (ENSNFUG00015003700)	snd1 (ENSNFUG00015003758)	LRRC4.1 (ENSNFUG00015004107)	ENSNFUG00015004109	Nfu_g_1_012058 (ENSNFUG00015004110)	PRRT4 (ENSNFUG00015004112)	impdh1b (ENSNFUG00015004128)	ENSNFUG00015004209	FAM3C (ENSNFUG00015004219) #22	ENSNFUG00015004223	ENSNFUG00015004227	BTG1 (ENSNFUG00015004230)	ENSNFUG00015004237	DCN (ENSNFUG00015004249)	lum (ENSNFUG00015004253)	kera (ENSNFUG00015004256)	epyc (ENSNFUG00015004258)	ENSNFUG00015004268	si:ch211-244b2.4 (ENSNFUG00015004277)	ENSNFUG00015004284	scyl2 (ENSNFUG00015004308)	DEPDC4 (ENSNFUG00015004366)	tcp11l2 (ENSNFUG00015004375)	ENSNFUG00015004386
Cyprinodontoidei	ANCESTRAL SPECIES	20	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT01100000264068	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT00940000164581.B	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Poeciliinae	ANCESTRAL SPECIES	19	ENSGT00940000161249.d	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Poecilia	ANCESTRAL SPECIES	29	ENSGT00940000161249.d	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Guppy	MODERN SPECIES	454	ENSPREG00000002394	cacna2d1a (ENSPREG00000002328)	ENSPREG00000002320	ENSPREG00000002300	pax4 (ENSPREG00000002286)	LRRC4 (ENSPREG00000002278)	snd1 (ENSPREG00000002189)	ENSPREG00000002167	ENSPREG00000002159	ENSPREG00000002150	ENSPREG00000002133	si:dkey-5i3.5 (ENSPREG00000002110)	ENSPREG00000002102	impdh1b (ENSPREG00000002032)	ENSPREG00000001866	fam3c (ENSPREG00000001835) #22	btg1 (ENSPREG00000001817)	ENSPREG00000001801	dcn (ENSPREG00000001779)	lum (ENSPREG00000001725)	kera (ENSPREG00000001702)	EPYC (ENSPREG00000001638)	si:dkeyp-38g8.5 (ENSPREG00000001593)	si:ch211-244b2.4 (ENSPREG00000001561)	ENSPREG00000001533	scyl2 (ENSPREG00000001218)	ENSPREG00000001150	ENSPREG00000001131	apaf1 (ENSPREG00000000752)	anks1b (ENSPREG00000023036)	uhrf1bp1l (ENSPREG00000023028)
NAME_6	ANCESTRAL SPECIES	144												ENSGT00530000064743.b.c	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Amazon molly	MODERN SPECIES	404											ENSPFOG00000009135	si:dkey-5i3.5 (ENSPFOG00000009129)	ENSPFOG00000023055	impdh1b (ENSPFOG00000008979)	ENSPFOG00000008791	fam3c (ENSPFOG00000008654) #22	btg1 (ENSPFOG00000008625)	ENSPFOG00000008612	dcn (ENSPFOG00000008407)	kera (ENSPFOG00000008371)	epyc (ENSPFOG00000008328)	si:dkeyp-38g8.5 (ENSPFOG00000008311)	si:ch211-244b2.4 (ENSPFOG00000008262)	ENSPFOG00000008191	scyl2 (ENSPFOG00000007922)	ENSPFOG00000007804	tcp11l2 (ENSPFOG00000007657)	apaf1 (ENSPFOG00000007334)	ENSPFOG00000021939	ENSPFOG00000024317	anks1b (ENSPFOG00000006852)
Sailfin molly	MODERN SPECIES	1137										ENSPLAG00000021182	si:dkey-5i3.5 (ENSPLAG00000021187)	ENSPLAG00000021215	ENSPLAG00000021240	impdh1b (ENSPLAG00000021264)	ENSPLAG00000021319	fam3c (ENSPLAG00000000462) #22	btg1 (ENSPLAG00000021336)	ENSPLAG00000021348
Platyfish	MODERN SPECIES	8	gnsa (ENSXMAG00000015215)	dennd6b (ENSXMAG00000015257)	gcc1 (ENSXMAG00000015300)	arf5 (ENSXMAG00000015306)	lamtor4 (ENSXMAG00000027828)	atp6v1f (ENSXMAG00000015320)	KCNA5 (ENSXMAG00000020121)	KCNA1 (ENSXMAG00000020119)	ENSXMAG00000020118	ENSXMAG00000026635	ENSXMAG00000025240	si:dkey-5i3.5 (ENSXMAG00000026885)	ENSXMAG00000028675	impdh1b (ENSXMAG00000018652)	ENSXMAG00000018632	fam3c (ENSXMAG00000018624) #22	btg1 (ENSXMAG00000018622)	ENSXMAG00000028648	dcn (ENSXMAG00000027036)	lum (ENSXMAG00000018604)	kera (ENSXMAG00000018602)	epyc (ENSXMAG00000018588)	si:dkeyp-38g8.5 (ENSXMAG00000026377)	si:ch211-244b2.4 (ENSXMAG00000018584)	si:ch211-244b2.3 (ENSXMAG00000018581)	scyl2 (ENSXMAG00000018567)	ENSXMAG00000018558	tcp11l2 (ENSXMAG00000018543)	apaf1 (ENSXMAG00000018504)	anks1b (ENSXMAG00000001252)	ENSXMAG00000025411
NAME_4	ANCESTRAL SPECIES	16	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382.n	ENSGT00940000158177.b	ENSGT00940000158968.j	ENSGT01100000264068	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT00940000164581.B	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Sheepshead minnow	MODERN SPECIES	1168												ENSCVAG00000017267	impdh1b (ENSCVAG00000017253)	ENSCVAG00000017137	ENSCVAG00000017117	fam3c (ENSCVAG00000017107) #22	btg1 (ENSCVAG00000017093)	ENSCVAG00000017087	ENSCVAG00000017068
Mummichog	MODERN SPECIES	2268					cacna2d1a (ENSFHEG00000003995)	hgfa (ENSFHEG00000004020)	pax4 (ENSFHEG00000004042)	LRRC4 (ENSFHEG00000004055)	snd1 (ENSFHEG00000004093)	ENSFHEG00000004102	si:dkey-5i3.5 (ENSFHEG00000004110)	ENSFHEG00000004116	impdh1b (ENSFHEG00000004178)	ENSFHEG00000004191	ENSFHEG00000004291	fam3c (ENSFHEG00000004353) #22	btg1 (ENSFHEG00000004367)	ENSFHEG00000004400	dcn (ENSFHEG00000004440)	lum (ENSFHEG00000004449)	kera (ENSFHEG00000004459)	epyc (ENSFHEG00000004613)	si:dkeyp-38g8.5 (ENSFHEG00000004625)	si:ch211-244b2.4 (ENSFHEG00000004642)	si:ch211-244b2.3 (ENSFHEG00000004656)	scyl2 (ENSFHEG00000004766)	ENSFHEG00000004783	tcp11l2 (ENSFHEG00000004788)	apaf1 (ENSFHEG00000004836)	anks1b (ENSFHEG00000005075)	uhrf1bp1l (ENSFHEG00000005121)
Oryzias	ANCESTRAL SPECIES	20	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676.f	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Oryzias_a	ANCESTRAL SPECIES	15	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.d	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676.f	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	52	tmtc2a (ENSOSIG00000016224)	mettl25 (ENSOSIG00000016243)	ccdc59 (ENSOSIG00000016247)	ENSOSIG00000016273	prmt8b (ENSOSIG00000016298)	tspan11 (ENSOSIG00000016529)	sema3aa (ENSOSIG00000016598)	ENSOSIG00000018373	hgfa (ENSOSIG00000018737)	ENSOSIG00000018746	snd1 (ENSOSIG00000018785)	LRRC4 (ENSOSIG00000019624)	ENSOSIG00000019625	impdh1b (ENSOSIG00000019664)	ENSOSIG00000019825	fam3c (ENSOSIG00000019832) #22	btg1 (ENSOSIG00000019835)	ENSOSIG00000019839	dcn (ENSOSIG00000019846)	lum (ENSOSIG00000019847)	kera (ENSOSIG00000019848)	epyc (ENSOSIG00000019850)	si:dkeyp-38g8.5 (ENSOSIG00000019852)	si:ch211-244b2.4 (ENSOSIG00000019857)	ENSOSIG00000019859	scyl2 (ENSOSIG00000019870)	ENSOSIG00000019878	tcp11l2 (ENSOSIG00000019881)	apaf1 (ENSOSIG00000019941)	anks1b (ENSOSIG00000020564)	uhrf1bp1l (ENSOSIG00000020583)
Chinese medaka	MODERN SPECIES	51	mettl25 (ENSOSIG00000020233)	ccdc59 (ENSOSIG00000020236)	CRACR2A (ENSOSIG00000020243)	prmt8b (ENSOSIG00000020278)	sema3aa (ENSOSIG00000021042)	ENSOSIG00000021070	hgfa (ENSOSIG00000021164)	pax4 (ENSOSIG00000021168)	snd1 (ENSOSIG00000021258)	LRRC4 (ENSOSIG00000021276)	ENSOSIG00000021277	ENSOSIG00000021278	si:dkey-5i3.5 (ENSOSIG00000021280)	ENSOSIG00000021281	impdh1b (ENSOSIG00000021287)	fam3c (ENSOSIG00000021340) #22	btg1 (ENSOSIG00000021344)	ENSOSIG00000021347	dcn (ENSOSIG00000021349)	lum (ENSOSIG00000021350)	kera (ENSOSIG00000021352)	epyc (ENSOSIG00000021354)	si:dkeyp-38g8.5 (ENSOSIG00000021356)	si:ch211-244b2.4 (ENSOSIG00000021357)	ENSOSIG00000021361	scyl2 (ENSOSIG00000021363)	ENSOSIG00000021372	tcp11l2 (ENSOSIG00000021375)	apaf1 (ENSOSIG00000021425)	anks1b (ENSOSIG00000021498)	uhrf1bp1l (ENSOSIG00000021508)
Japanese Medaka HdrR	MODERN SPECIES	15	prmt8b (ENSORLG00000014905)	tspan11 (ENSORLG00000014952)	sema3aa (ENSORLG00000015034)	ENSORLG00000015076	ENSORLG00000015164	ENSORLG00000025600	ENSORLG00000030537	ENSORLG00000015177	snd1 (ENSORLG00000015201)	LRRC4 (ENSORLG00000015207)	ENSORLG00000028186	lep-b (ENSORLG00000021942)	ENSORLG00000024290	impdh1b (ENSORLG00000015224)	ENSORLG00000015230	fam3c (ENSORLG00000015255) #22	btg1 (ENSORLG00000029614)	ENSORLG00000029439	ENSORLG00000026036	dcn (ENSORLG00000015308)	lum (ENSORLG00000015318)	kera (ENSORLG00000015326)	epyc (ENSORLG00000029785)	si:dkeyp-38g8.5 (ENSORLG00000015334)	si:ch211-244b2.4 (ENSORLG00000015345)	ENSORLG00000015352	scyl2 (ENSORLG00000015396)	ENSORLG00000015415	tcp11l2 (ENSORLG00000015425)	apaf1 (ENSORLG00000015449)	ENSORLG00000022959
Oryzias_b	ANCESTRAL SPECIES	19	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676.f	ENSGT01000000214676.e	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h
Javanese ricefish	MODERN SPECIES	15	CRACR2A (ENSOJAG00000013914)	prmt8b (ENSOJAG00000012190)	tspan11 (ENSOJAG00000012067)	ENSOJAG00000012058	ENSOJAG00000012011	cacna2d1a (ENSOJAG00000011975)	hgfa (ENSOJAG00000011910)	ENSOJAG00000011878	LRRC4 (ENSOJAG00000011873)	snd1 (ENSOJAG00000009781)	ENSOJAG00000009606	ENSOJAG00000009591	ENSOJAG00000009587	impdh1b (ENSOJAG00000009409)	ENSOJAG00000009356	fam3c (ENSOJAG00000009244) #22	btg1 (ENSOJAG00000009216)	ENSOJAG00000009190	dcn (ENSOJAG00000009156)	lum (ENSOJAG00000009146)	kera (ENSOJAG00000009135)	epyc (ENSOJAG00000009122)	si:ch211-244b2.4 (ENSOJAG00000009092)	ENSOJAG00000009045	ENSOJAG00000009030	scyl2 (ENSOJAG00000022587)	ENSOJAG00000022579	tcp11l2 (ENSOJAG00000022552)	apaf1 (ENSOJAG00000022532)	anks1b (ENSOJAG00000022495)	ENSOJAG00000022382
Indian medaka	MODERN SPECIES	2	tspan11 (ENSOMEG00000007078)	sema3aa (ENSOMEG00000007029)	ENSOMEG00000006887	ENSOMEG00000006659	hgfa (ENSOMEG00000006634)	pax4 (ENSOMEG00000006589)	snd1 (ENSOMEG00000006406)	LRRC4 (ENSOMEG00000006324)	ENSOMEG00000006321	ENSOMEG00000006310	si:dkey-5i3.5 (ENSOMEG00000006302)	ENSOMEG00000006295	ENSOMEG00000006284	impdh1b (ENSOMEG00000006271)	ENSOMEG00000006249	fam3c (ENSOMEG00000006203) #22	btg1 (ENSOMEG00000006173)	ENSOMEG00000006163	dcn (ENSOMEG00000006148)	lum (ENSOMEG00000006096)	kera (ENSOMEG00000006086)	epyc (ENSOMEG00000006079)	si:dkeyp-38g8.5 (ENSOMEG00000000137)	si:ch211-244b2.4 (ENSOMEG00000006058)	ENSOMEG00000006048	ENSOMEG00000006032	scyl2 (ENSOMEG00000006012)	DEPDC4 (ENSOMEG00000005967)	tcp11l2 (ENSOMEG00000005951)	apaf1 (ENSOMEG00000000126)	anks1b (ENSOMEG00000005882)
Ovalentaria_B	ANCESTRAL SPECIES	23	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000177480.a
Cichlidae	ANCESTRAL SPECIES	24	ENSGT00940000161249	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000177670	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	21	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000182271	ENSGT00940000154572.h
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000156759.b	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000182271	ENSGT00940000154572.h
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT00940000164581.B	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000182271	ENSGT00940000154572.h
Burton s mouthbrooder	MODERN SPECIES	385	prmt8b (ENSHBUG00000018781)	ENSHBUG00000018789	tspan11 (ENSHBUG00000018804)	sema3aa (ENSHBUG00000018911)	ENSHBUG00000019024	cacna2d1a (ENSHBUG00000019038)	hgfa (ENSHBUG00000019052)	pax4 (ENSHBUG00000019061)	LRRC4 (ENSHBUG00000019076)	snd1 (ENSHBUG00000019135)	ENSHBUG00000019142	si:dkey-5i3.5 (ENSHBUG00000019150)	ENSHBUG00000019158	impdh1b (ENSHBUG00000019305)	ENSHBUG00000019350	fam3c (ENSHBUG00000019362) #22	btg1 (ENSHBUG00000019375)	ENSHBUG00000019386	dcn (ENSHBUG00000019392)	lum (ENSHBUG00000019397)	kera (ENSHBUG00000019407)	epyc (ENSHBUG00000000865)	si:dkeyp-38g8.5 (ENSHBUG00000000579)	si:ch211-244b2.4 (ENSHBUG00000019440)	si:ch211-244b2.3 (ENSHBUG00000019453)	scyl2 (ENSHBUG00000019473)	ENSHBUG00000019508	tcp11l2 (ENSHBUG00000019597)	apaf1 (ENSHBUG00000019631)
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000182271	ENSGT00940000154572.h
P. nyererei	MODERN SPECIES	347	prmt8b (ENSPNYG00000000641)	ENSPNYG00000000666	tspan11 (ENSPNYG00000000682)	sema3aa (ENSPNYG00000000710)	ENSPNYG00000000770	ENSPNYG00000000785	hgfa (ENSPNYG00000000796)	ENSPNYG00000000866	snd1 (ENSPNYG00000000932)	LRRC4 (ENSPNYG00000001024)	ENSPNYG00000001038	si:dkey-5i3.5 (ENSPNYG00000001056)	ENSPNYG00000001080	impdh1b (ENSPNYG00000001120)	ENSPNYG00000001182	fam3c (ENSPNYG00000001211) #22	btg1 (ENSPNYG00000001236)	ENSPNYG00000001247	dcn (ENSPNYG00000001271)	lum (ENSPNYG00000001280)	kera (ENSPNYG00000001289)	epyc (ENSPNYG00000001335)	si:ch211-244b2.4 (ENSPNYG00000001424)	ENSPNYG00000001439	scyl2 (ENSPNYG00000001469)	ENSPNYG00000001482	tcp11l2 (ENSPNYG00000001534)	apaf1 (ENSPNYG00000001602)	ENSPNYG00000001696	anks1b (ENSPNYG00000001726)	ENSPNYG00000001813
Haplochromini_B	ANCESTRAL SPECIES	11	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00940000159260.h	ENSGT00510000047270	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT00940000164581.B	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Zebra mbuna	MODERN SPECIES	1099	tspan11 (ENSMZEG00005005904)	sema3aa (ENSMZEG00005005876)	ENSMZEG00005005817	ENSMZEG00005005790	hgfa (ENSMZEG00005005777)	ENSMZEG00005005760	ENSMZEG00005005747	LRRC4 (ENSMZEG00005005741)	snd1 (ENSMZEG00005005681)	ENSMZEG00005005662	ENSMZEG00005005652	si:dkey-5i3.5 (ENSMZEG00005005643)	ENSMZEG00005005637	impdh1b (ENSMZEG00005005561)	ENSMZEG00005005521	fam3c (ENSMZEG00005005500) #22	btg1 (ENSMZEG00005005485)	ENSMZEG00005005478	dcn (ENSMZEG00005005461)	lum (ENSMZEG00005005454)	kera (ENSMZEG00005005437)	epyc (ENSMZEG00005005416)	si:dkeyp-38g8.5 (ENSMZEG00005005404)	si:ch211-244b2.4 (ENSMZEG00005005397)	si:ch211-244b2.3 (ENSMZEG00005005381)	scyl2 (ENSMZEG00005005348)	ENSMZEG00005005331	tcp11l2 (ENSMZEG00005005314)	apaf1 (ENSMZEG00005005271)	anks1b (ENSMZEG00005005137)	uhrf1bp1l (ENSMZEG00005005085)
Eastern happy	MODERN SPECIES	8	ENSACLG00000023608	tspan11 (ENSACLG00000023552)	sema3aa (ENSACLG00000023484)	ENSACLG00000023166	cacna2d1a (ENSACLG00000023002)	hgfa (ENSACLG00000022967)	pax4 (ENSACLG00000022952)	LRRC4 (ENSACLG00000022949)	snd1 (ENSACLG00000022897)	ENSACLG00000022802	si:dkey-5i3.5 (ENSACLG00000022784)	ENSACLG00000022758	impdh1b (ENSACLG00000022668)	ENSACLG00000022656	ENSACLG00000022622	fam3c (ENSACLG00000022525) #22	btg1 (ENSACLG00000022519)	ENSACLG00000022513	dcn (ENSACLG00000022503)	lum (ENSACLG00000022489)	kera (ENSACLG00000022464)	epyc (ENSACLG00000022420)	si:dkeyp-38g8.5 (ENSACLG00000022438)	si:ch211-244b2.4 (ENSACLG00000022403)	si:ch211-244b2.3 (ENSACLG00000022380)	scyl2 (ENSACLG00000022310)	ENSACLG00000022256	tcp11l2 (ENSACLG00000022214)	apaf1 (ENSACLG00000022176)	ENSACLG00000022153	anks1b (ENSACLG00000022062)
Lyretail cichlid	MODERN SPECIES	291	prmt8b (ENSNBRG00000005971)	ENSNBRG00000005998	tspan11 (ENSNBRG00000006004)	sema3aa (ENSNBRG00000006039)	ENSNBRG00000006103	ENSNBRG00000006276	hgfa (ENSNBRG00000006504)	ENSNBRG00000006652	snd1 (ENSNBRG00000006681)	LRRC4 (ENSNBRG00000006717)	ENSNBRG00000006741	si:dkey-5i3.5 (ENSNBRG00000006761)	ENSNBRG00000006765	impdh1b (ENSNBRG00000006793)	ENSNBRG00000006818	fam3c (ENSNBRG00000006867) #22	btg1 (ENSNBRG00000006972)	ENSNBRG00000006982	dcn (ENSNBRG00000007021)	lum (ENSNBRG00000007027)	kera (ENSNBRG00000007031)	epyc (ENSNBRG00000007038)	si:dkeyp-38g8.5 (ENSNBRG00000007068)	si:ch211-244b2.4 (ENSNBRG00000007103)	ENSNBRG00000007125	scyl2 (ENSNBRG00000007169)	ENSNBRG00000007440	tcp11l2 (ENSNBRG00000007474)	apaf1 (ENSNBRG00000007523)	ENSNBRG00000008092	anks1b (ENSNBRG00000008153)
Nile tilapia	MODERN SPECIES	8	tspan11 (ENSONIG00000011539)	sema3aa (ENSONIG00000011531)	ENSONIG00000011526	cacna2d1a (ENSONIG00000011520)	hgfa (ENSONIG00000011505)	ENSONIG00000041328	pax4 (ENSONIG00000011503)	snd1 (ENSONIG00000011481)	LRRC4 (ENSONIG00000029412)	ENSONIG00000011480	ENSONIG00000037271	si:dkey-5i3.5 (ENSONIG00000011479)	ENSONIG00000031172	impdh1b (ENSONIG00000011474)	ENSONIG00000011468	fam3c (ENSONIG00000011462) #22	btg1 (ENSONIG00000042934)	ENSONIG00000011456	dcn (ENSONIG00000034299)	lum (ENSONIG00000037870)	kera (ENSONIG00000011450)	epyc (ENSONIG00000011449)	si:dkeyp-38g8.5 (ENSONIG00000011448)	si:ch211-244b2.4 (ENSONIG00000011444)	si:ch211-244b2.3 (ENSONIG00000030041)	scyl2 (ENSONIG00000011440)	ENSONIG00000011437	tcp11l2 (ENSONIG00000011431)	apaf1 (ENSONIG00000011426)	ENSONIG00000039975	anks1b (ENSONIG00000011422)
Midas cichlid	MODERN SPECIES	30	ENSACIG00000003975	tspan11 (ENSACIG00000003904)	sema3aa (ENSACIG00000003852)	ENSACIG00000003840	ENSACIG00000003780	ENSACIG00000003758	cacna2d1a (ENSACIG00000003681)	hgfa (ENSACIG00000003632)	ENSACIG00000003608	LRRC4 (ENSACIG00000003594)	snd1 (ENSACIG00000003551)	ENSACIG00000003535	si:dkey-5i3.5 (ENSACIG00000003531)	impdh1b (ENSACIG00000003493)	ENSACIG00000003468	fam3c (ENSACIG00000003446) #22	btg1 (ENSACIG00000003434)	ENSACIG00000003426	dcn (ENSACIG00000003406)	lum (ENSACIG00000003369)	kera (ENSACIG00000003343)	epyc (ENSACIG00000003231)	si:dkeyp-38g8.5 (ENSACIG00000003215)	ENSACIG00000003171	scyl2 (ENSACIG00000003116)	DEPDC4 (ENSACIG00000003093)	tcp11l2 (ENSACIG00000003022)	ENSACIG00000003006	apaf1 (ENSACIG00000002681)	anks1b (ENSACIG00000002599)	uhrf1bp1l (ENSACIG00000002419)
Pomacentridae	ANCESTRAL SPECIES	53	ENSGT00940000161249	ENSGT00940000167336	ENSGT01030000235313	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270.f	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000177480.a
Pomacentridae_A	ANCESTRAL SPECIES	23	ENSGT01040000240400.c.b.a.a.b.a	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb.e	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270.f	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.g.b	ENSGT00940000177480.a
Amphiprion	ANCESTRAL SPECIES	53	ENSGT00940000155867.a.b	ENSGT01040000240400.c.b.a.a.b.a	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb.e	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270.f	ENSGT00940000159260.h	ENSGT01030000234865	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000157835	ENSGT00940000157710	ENSGT00940000154572.h	ENSGT00600000084428.b
Orange clownfish	MODERN SPECIES	13	ENSAPEG00000006538	tspan11 (ENSAPEG00000006557)	sema3aa (ENSAPEG00000006668)	ENSAPEG00000006747	cacna2d1a (ENSAPEG00000006854)	ENSAPEG00000006918	hgfa (ENSAPEG00000006934)	pax4 (ENSAPEG00000007008)	snd1 (ENSAPEG00000007067)	LRRC4 (ENSAPEG00000007177)	ENSAPEG00000007244	si:dkey-5i3.5 (ENSAPEG00000007262)	ENSAPEG00000007277	impdh1b (ENSAPEG00000007301)	ENSAPEG00000007354	fam3c (ENSAPEG00000007370) #22	btg1 (ENSAPEG00000007416)	ENSAPEG00000007430	dcn (ENSAPEG00000007455)	lum (ENSAPEG00000007485)	kera (ENSAPEG00000007496)	epyc (ENSAPEG00000007508)	si:dkeyp-38g8.5 (ENSAPEG00000007561)	si:ch211-244b2.4 (ENSAPEG00000007620)	ENSAPEG00000007632	scyl2 (ENSAPEG00000007681)	ENSAPEG00000007791	tcp11l2 (ENSAPEG00000007824)	apaf1 (ENSAPEG00000007835)	anks1b (ENSAPEG00000007920)	uhrf1bp1l (ENSAPEG00000008081)
Clown anemonefish	MODERN SPECIES	1693											ENSAOCG00000009240	si:dkey-5i3.5 (ENSAOCG00000009253)	ENSAOCG00000009264	ENSAOCG00000009287	impdh1b (ENSAOCG00000009335)	fam3c (ENSAOCG00000009388) #22	btg1 (ENSAOCG00000009401)	ENSAOCG00000000572	dcn (ENSAOCG00000009447)	lum (ENSAOCG00000009459)	kera (ENSAOCG00000009471)	epyc (ENSAOCG00000009498)	si:dkeyp-38g8.5 (ENSAOCG00000009552)	si:ch211-244b2.4 (ENSAOCG00000009571)	ENSAOCG00000009597	scyl2 (ENSAOCG00000009694)	ENSAOCG00000009736	tcp11l2 (ENSAOCG00000000601)	apaf1 (ENSAOCG00000009836)	ENSAOCG00000009912
Spiny chromis	MODERN SPECIES	78						cacna2d1a (ENSAPOG00000000467)	hgfa (ENSAPOG00000017488)	pax4 (ENSAPOG00000017552)	LRRC4 (ENSAPOG00000017571)	snd1 (ENSAPOG00000017599)	ENSAPOG00000017648	si:dkey-5i3.5 (ENSAPOG00000017658)	ENSAPOG00000017668	impdh1b (ENSAPOG00000017764)	ENSAPOG00000017820	fam3c (ENSAPOG00000017879) #22	btg1 (ENSAPOG00000017895)	ENSAPOG00000017908	dcn (ENSAPOG00000017942)	lum (ENSAPOG00000017948)	kera (ENSAPOG00000017975)	epyc (ENSAPOG00000018016)	si:dkeyp-38g8.5 (ENSAPOG00000018023)	si:ch211-244b2.4 (ENSAPOG00000018028)	ENSAPOG00000018036	scyl2 (ENSAPOG00000018066)	ENSAPOG00000018117	tcp11l2 (ENSAPOG00000018129)	apaf1 (ENSAPOG00000018493)	ENSAPOG00000018515	ENSAPOG00000018537
Bicolor damselfish	MODERN SPECIES	372											ENSSPAG00000011784	si:dkey-5i3.5 (ENSSPAG00000011791)	ENSSPAG00000011795	impdh1b (ENSSPAG00000011815)	ENSSPAG00000011910	fam3c (ENSSPAG00000011924) #22	btg1 (ENSSPAG00000011935)	ENSSPAG00000011945	dcn (ENSSPAG00000011955)	lum (ENSSPAG00000011980)	kera (ENSSPAG00000011988)	epyc (ENSSPAG00000011995)	si:dkeyp-38g8.5 (ENSSPAG00000012016)	si:ch211-244b2.4 (ENSSPAG00000012034)	ENSSPAG00000012067	scyl2 (ENSSPAG00000012110)	ENSSPAG00000012194	tcp11l2 (ENSSPAG00000012228)	apaf1 (ENSSPAG00000012262)
Pinecone sodierfish	MODERN SPECIES	15	ENSMMDG00005021159	tspan11 (ENSMMDG00005021158)	sema3aa (ENSMMDG00005020157)	ENSMMDG00005020122	cacna2d1a (ENSMMDG00005020111)	hgfa (ENSMMDG00005020099)	ENSMMDG00005020095	LRRC4 (ENSMMDG00005020091)	snd1 (ENSMMDG00005017281)	ENSMMDG00005017225	ENSMMDG00005017222	si:dkey-5i3.5 (ENSMMDG00005017221)	ENSMMDG00005017220	impdh1b (ENSMMDG00005015996)	ENSMMDG00005015962	fam3c (ENSMMDG00005015958) #22	btg1 (ENSMMDG00005015955)	dcn (ENSMMDG00005015950)	kera (ENSMMDG00005015945)	epyc (ENSMMDG00005015938)	si:dkeyp-38g8.5 (ENSMMDG00005015935)	si:ch211-244b2.4 (ENSMMDG00005015930)	ENSMMDG00005015921	scyl2 (ENSMMDG00005015906)	ENSMMDG00005015900	FUT9 (ENSMMDG00005015894)	FUT9 (ENSMMDG00005015893)	FUT9 (ENSMMDG00005015892)	FUT9 (ENSMMDG00005015891)	FUT9 (ENSMMDG00005015886)	tcp11l2 (ENSMMDG00005015882)
Cod	MODERN SPECIES	10	prmt8b (ENSGMOG00000018750)	tspan11 (ENSGMOG00000018762)	sema3aa (ENSGMOG00000018773)	ENSGMOG00000022391	cacna2d1a (ENSGMOG00000018874)	hgfa (ENSGMOG00000018906)	pax4 (ENSGMOG00000018922)	snd1 (ENSGMOG00000018932)	ENSGMOG00000029925	ENSGMOG00000023616	ENSGMOG00000028590	ENSGMOG00000024197	ENSGMOG00000000331	ENSGMOG00000025444	ENSGMOG00000000346	ENSGMOG00000000352 #22	btg1 (ENSGMOG00000037023)	ENSGMOG00000030692	dcn (ENSGMOG00000012684)	kera (ENSGMOG00000012686)	epyc (ENSGMOG00000012689)	si:dkeyp-38g8.5 (ENSGMOG00000034180)	FGD6 (ENSGMOG00000002085)	VEZT (ENSGMOG00000002049)	METAP2 (ENSGMOG00000002039)	USP44 (ENSGMOG00000031024)	ENSGMOG00000012925	ENSGMOG00000012934	ENSGMOG00000012943	ENSGMOG00000012951	ENSGMOG00000025875
Protacanthopterygii	ANCESTRAL SPECIES	23	ENSGT00940000155867.a.b	ENSGT00940000161249	ENSGT00940000167336	ENSGT00620000087961.a.b.a.b.a	ENSGT00940000155209.mb	ENSGT00940000156019.c.b	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h	ENSGT00990000206730	ENSGT00530000064743.b	ENSGT00730000111591.b	ENSGT00940000154156.c.b	ENSGT00990000205707	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455	ENSGT00940000158382	ENSGT00940000158177.b	ENSGT00940000158968	ENSGT00940000157574	ENSGT00640000091774.b	ENSGT00940000164581.A.a.a	ENSGT01000000214676	ENSGT00880000138031	ENSGT00950000182976.a.a	ENSGT00940000155095.i.b.b	ENSGT00940000157835	ENSGT00390000018647	ENSGT00940000157710
Salmoninae	ANCESTRAL SPECIES	94	ENSGT00940000167336.e	ENSGT00620000087961.a.b.a.b.a.i	ENSGT00940000155209.mb.h	ENSGT00530000064743.b.e	ENSGT00940000155209.mb.g.b.a	ENSGT00940000156019.c.b.c	ENSGT00940000165785	ENSGT00510000047270	ENSGT00940000159260.h.c.a	ENSGT00990000206730	ENSGT00530000064743.b.f	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a.c.b	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h	ENSGT00940000167455.i	ENSGT00940000158382.o.a	ENSGT00940000167455.j
Huchen	DUPLICATION
Huchen	MODERN SPECIES	3391															ENSHHUG00000000244	fam3c (ENSHHUG00000000251) #22	btg1 (ENSHHUG00000000270)	ENSHHUG00000000311
Huchen	MODERN SPECIES	5408															ENSHHUG00000003347	fam3c (ENSHHUG00000003351) #22
Salmoninae_a	ANCESTRAL SPECIES	107	ENSGT00620000087961.a.b.a.b.a.i	ENSGT00940000155209.mb.g.a	ENSGT00940000156019.c.b.d.b.b	ENSGT00940000155209.mb.g.b.a	ENSGT00940000156019.c.b.c	ENSGT00940000165785	ENSGT00510000047270.j	ENSGT00940000159260.h.c.a	ENSGT00990000206730	ENSGT00530000064743.b.f	ENSGT00530000064743.b.e.a	ENSGT00730000111591.b	ENSGT00990000205707	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a.c.b	ENSGT00950000183004.a.b.a.a #22	ENSGT00950000182952.C.h.f	ENSGT00940000167455.j	ENSGT00940000158382.o.b
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	92	ENSGT00940000161249.a.a	ENSGT00940000161249.b	ENSGT00940000167336.f	ENSGT00620000087961.a.b.a.b.a.j	ENSGT00940000155209.mb.g.a.b	ENSGT00940000156019.c.b.d.b.a	ENSGT00940000165785	ENSGT00940000159260.h.c.a	ENSGT00510000047270.i.a	ENSGT00940000159260.h.d	ENSGT00990000206730.c.a	ENSGT00530000064743.b.e.a	ENSGT00730000111591.b.c	ENSGT00940000154156.c.b.n.a	ENSGT01030000234563.a.a.c.a.c.a	ENSGT00950000183004.a.b.a.a.w #22	ENSGT00950000182952.C.h.f	ENSGT00940000167455.j	ENSGT00940000158382.o.b	ENSGT00940000158177.b.e	ENSGT00940000158968.e	ENSGT00940000157574.w.b	ENSGT00640000091774.b.h	ENSGT00940000164581.A.a.a.h	ENSGT01000000214676.c	ENSGT00880000138031.t	ENSGT00950000182976.a.a.d	ENSGT00940000155095.i.b.b.c.a.a	ENSGT00940000155095.i.b.b.c.b	ENSGT00940000157835.g.b	ENSGT00940000157835.h
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000006266	ENSSSAG00000100925	ENSSSAG00000006525	cacna2d1a (ENSSSAG00000006531)	hgfa (ENSSSAG00000025368)	pax4 (ENSSSAG00000047932)	ENSSSAG00000105511	ENSSSAG00000032651	snd1 (ENSSSAG00000082155)	lepb1 (ENSSSAG00000033095)	ENSSSAG00000107514	ENSSSAG00000101057	ENSSSAG00000084661	imdh1 (ENSSSAG00000103871)	ENSSSAG00000084632	ENSSSAG00000107588 #22	BTG1 (ENSSSAG00000115043)	ENSSSAG00000117866	pgs2 (ENSSSAG00000020386)	lum (ENSSSAG00000020979)	kera (ENSSSAG00000106037)	ENSSSAG00000115936	epyc (ENSSSAG00000020178)	si:dkeyp-38g8.5 (ENSSSAG00000100850)	ENSSSAG00000020083	ENSSSAG00000054949	ENSSSAG00000055007	ENSSSAG00000019477	ENSSSAG00000109817	ENSSSAG00000019400	ENSSSAG00000120410
River trout	MODERN SPECIES	34	ccdc59 (ENSSTUG00000030858)	ENSSTUG00000030864	prmt8b (ENSSTUG00000030889)	tspan11 (ENSSTUG00000030895)	sema3aa (ENSSTUG00000030948)	ENSSTUG00000032798	cacna2d1a (ENSSTUG00000033393)	ENSSTUG00000036491	hgfa (ENSSTUG00000036503)	pax4 (ENSSTUG00000036524)	snd1 (ENSSTUG00000036606)	LRRC4 (ENSSTUG00000037929)	ENSSTUG00000037939	IMPDH1 (ENSSTUG00000037947)	ENSSTUG00000037967	fam3c (ENSSTUG00000038086) #22	btg1 (ENSSTUG00000038102)	ENSSTUG00000038107	ENSSTUG00000038113	dcn (ENSSTUG00000038117)	lum (ENSSTUG00000038135)	kera (ENSSTUG00000038142)	epyc (ENSSTUG00000038152)	si:dkeyp-38g8.5 (ENSSTUG00000038179)	si:ch211-244b2.4 (ENSSTUG00000038185)	si:ch211-244b2.3 (ENSSTUG00000038205)	scyl2 (ENSSTUG00000038285)	ENSSTUG00000038470	FUT9 (ENSSTUG00000038490)	FUT9 (ENSSTUG00000038493)	tcp11l2 (ENSSTUG00000038503)
Salmo	ANCESTRAL SPECIES	25	ENSGT00940000155867.a.b.c.b	ENSGT00940000161249.a.b	ENSGT00940000167336.e	ENSGT00620000087961.a.b.a.b.a.i	ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.a.b	ENSGT01040000240385.A.b.b.a.b.a.a.a.a.b.a.a	ENSGT00940000155209.mb.g.a.a	ENSGT00940000156019.c.b.d.b.b	ENSGT00990000206730.d	ENSGT00530000064743.b.f	ENSGT00530000064743.b.e.b	ENSGT00730000111591.b.d	ENSGT00940000154156.c.b.n.b	ENSGT01030000234563.a.a.c.a.d	ENSGT01030000234563.a.a.c.a.c.b	ENSGT00950000183004.a.b.a.a.x #22	ENSGT00950000182952.C.h.e	ENSGT00940000167455.i	ENSGT00940000158382.o.a.a	ENSGT00940000158177.b.f	ENSGT00940000158968.f	ENSGT00940000157574.w.a	ENSGT00640000091774.b.g	ENSGT00940000164581.A.a.a.g	ENSGT01000000214676.d	ENSGT00880000138031.s	ENSGT00950000182976.a.a.c	ENSGT00940000155095.i.b.b.c.a.b	ENSGT00940000157835.g.a	ENSGT00390000018647	ENSGT01100000263473.a.b.g.a.a.b.a.b.a.a.b.a
River trout	MODERN SPECIES	38	ENSSTUG00000027553	ENSSTUG00000027542	ENSSTUG00000027536	cacna2d1a (ENSSTUG00000024038)	hgfa (ENSSTUG00000023769)	ENSSTUG00000023744	ENSSTUG00000023732	LRRC4 (ENSSTUG00000023724)	snd1 (ENSSTUG00000020987)	ENSSTUG00000020864	si:dkey-5i3.5 (ENSSTUG00000020855)	ENSSTUG00000020842	ENSSTUG00000020824	impdh1b (ENSSTUG00000020282)	ENSSTUG00000020245	fam3c (ENSSTUG00000020216) #22	btg1 (ENSSTUG00000020204)	ENSSTUG00000020198	dcn (ENSSTUG00000020180)	lum (ENSSTUG00000020158)	kera (ENSSTUG00000020154)	epyc (ENSSTUG00000020139)	si:dkeyp-38g8.5 (ENSSTUG00000020129)	si:ch211-244b2.4 (ENSSTUG00000020114)	ENSSTUG00000020094	scyl2 (ENSSTUG00000019896)	ENSSTUG00000019868	FUT9 (ENSSTUG00000019862)	FUT9 (ENSSTUG00000019855)	FUT9 (ENSSTUG00000019845)	tcp11l2 (ENSSTUG00000019829)
Atlantic salmon	MODERN SPECIES	26	prmt8b (ENSSSAG00000085587)	tspan11 (ENSSSAG00000004120)	sema3aa (ENSSSAG00000100291)	ENSSSAG00000086957	cacna2d1a (ENSSSAG00000092621)	hgfa (ENSSSAG00000083023)	pax4 (ENSSSAG00000043621)	ENSSSAG00000109065	snd1 (ENSSSAG00000026891)	lepb2 (ENSSSAG00000002231)	ENSSSAG00000002250	ENSSSAG00000118736	ENSSSAG00000033335	impdh1b (ENSSSAG00000034895)	ENSSSAG00000002619	ENSSSAG00000101565 #22	btg1 (ENSSSAG00000054085)	ENSSSAG00000108947	ENSSSAG00000095748	dcn (ENSSSAG00000121802)	lum (ENSSSAG00000020269)	kera (ENSSSAG00000110385)	epyc (ENSSSAG00000054919)	si:dkeyp-38g8.5 (ENSSSAG00000083861)	ENSSSAG00000054938	scyl2 (ENSSSAG00000115955)	ENSSSAG00000114174	ENSSSAG00000098002	ENSSSAG00000002665	ENSSSAG00000054071	ENSSSAG00000084023
Oncorhynchus	DUPLICATION
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	91	ENSGT00940000155209.mb.g.b.a	ENSGT00940000156019.c.b.c.a	ENSGT00940000165785	ENSGT00510000047270.i.a	ENSGT00940000159260.h.c.b	ENSGT00510000047270.j	ENSGT00940000159260.h.c.a.a	ENSGT00990000206730.f	ENSGT00530000064743.b.e.a	ENSGT00730000111591.b.f	ENSGT00990000205707	ENSGT00530000064743.b.f	ENSGT00730000111591.b.e	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a.c.b	ENSGT00950000183004.a.b.a.a.y.a #22	ENSGT00950000182952.C.h.e	ENSGT01030000234563.a.a.c.a.c.a	ENSGT00950000183004.a.b.a.a.y.b #22	ENSGT00950000182952.C.h.f	ENSGT00940000167455.i	ENSGT00940000158382.o.a	ENSGT00940000158177.b.h	ENSGT00940000158968.e.b	ENSGT00940000167455.j	ENSGT00940000158382.o.b	ENSGT00940000157574.u.a	ENSGT00640000091774.b.j	ENSGT00940000164581.A.a.a.h	ENSGT01000000214676.d	ENSGT00880000138031.r.a
Rainbow trout	MODERN SPECIES	6	ENSOMYG00000035827	ENSOMYG00000070133	ENSOMYG00000059451	ENSOMYG00000049526	ENSOMYG00000062922	snd1 (ENSOMYG00000035597)	ENSOMYG00000073817	ENSOMYG00000071236	ENSOMYG00000035462	ENSOMYG00000068470	ENSOMYG00000035448	ENSOMYG00000035432	ENSOMYG00000035412	impdh1b (ENSOMYG00000035078)	ENSOMYG00000020508	ENSOMYG00000035003 #22	btg1 (ENSOMYG00000034979)	ENSOMYG00000062686	ENSOMYG00000047881	ENSOMYG00000072178	ENSOMYG00000034970	dcn (ENSOMYG00000034961)	lum (ENSOMYG00000034937)	kera (ENSOMYG00000034932)	epyc (ENSOMYG00000034911)	si:dkeyp-38g8.5 (ENSOMYG00000034901)	si:ch211-244b2.4 (ENSOMYG00000034884)	ENSOMYG00000077608	ENSOMYG00000034804	ENSOMYG00000034780	ENSOMYG00000034776
Oncorhynchus_a	ANCESTRAL SPECIES	83	ENSGT00940000155209.mb.g.a	ENSGT00940000156019.c.b.c.b	ENSGT00940000167336.e	ENSGT00620000087961.a.b.a.b.a.j	ENSGT00940000156019.c.b.c.a	ENSGT00940000165785	ENSGT00510000047270.i.a	ENSGT00940000159260.h.c.b	ENSGT00510000047270.j	ENSGT00940000159260.h.c.a.a	ENSGT00990000206730.f	ENSGT00530000064743.b.e.a	ENSGT00730000111591.b.f	ENSGT00940000154156.c.b.i	ENSGT01030000234563.a.a.c.a.c.b.a	ENSGT00950000183004.a.b.a.a.y.a #22	ENSGT00940000167455.i	ENSGT00940000158382.p	ENSGT00940000158177.b.g.a	ENSGT00940000158968.e.a	ENSGT00940000157574.u.b	ENSGT00640000091774.b.i	ENSGT01000000214676.c.a	ENSGT00880000138031.r.b	ENSGT00950000182976.a.a.c	ENSGT00940000155095.i.b.b.d.a	ENSGT00940000155095.i.b.b.c.a.b	ENSGT00940000157835.g.a	ENSGT00390000018647	ENSGT00940000157710.p.b	ENSGT01100000263473.a.b.g.a.a.b.a.b.a.a.b.a
Chinook salmon	MODERN SPECIES	57	zgc:65873 (ENSOTSG00005027209)	SYDE2 (ENSOTSG00005027207)	DNAI3 (ENSOTSG00005027171)	MCOLN3 (ENSOTSG00005027154)	gpsm2l (ENSOTSG00005027060)	STXBP3 (ENSOTSG00005027030)	ENSOTSG00005027028	btg1 (ENSOTSG00005027027)	fam3c (ENSOTSG00005027026) #22	ENSOTSG00005027025	ENSOTSG00005027024	impdh1b (ENSOTSG00005027023)	ENSOTSG00005027021	ENSOTSG00005027020	impdh1b (ENSOTSG00005024879)	fam3c (ENSOTSG00005024866) #22	si:dkey-5i3.5 (ENSOTSG00005024865)	ENSOTSG00005024863	ENSOTSG00005024862
Coho salmon	MODERN SPECIES	29	tspan11 (ENSOKIG00005025789)	ENSOKIG00005025931	ENSOKIG00005028950	cacna2d1a (ENSOKIG00005029137)	ENSOKIG00005032822	ENSOKIG00005032834	hgfa (ENSOKIG00005032853)	pax4 (ENSOKIG00005033046)	snd1 (ENSOKIG00005033151)	LRRC4 (ENSOKIG00005035146)	ENSOKIG00005035157	ENSOKIG00005035184	ENSOKIG00005035208	impdh1b (ENSOKIG00005035400)	ENSOKIG00005037584	ENSOKIG00005037620 #22	btg1 (ENSOKIG00005037694)	ENSOKIG00005037721	ENSOKIG00005037736	dcn (ENSOKIG00005037745)	lum (ENSOKIG00005037761)	kera (ENSOKIG00005037781)	epyc (ENSOKIG00005037790)	si:dkeyp-38g8.5 (ENSOKIG00005037807)	ENSOKIG00005037833	SCYL2 (ENSOKIG00005037889)	ENSOKIG00005038053	FUT9 (ENSOKIG00005038095)	tcp11l2 (ENSOKIG00005038105)	ENSOKIG00005038162	apaf1 (ENSOKIG00005038271)
Oncorhynchus	ANCESTRAL SPECIES	91	ENSGT00510000047270.i.a	ENSGT00940000159260.h.c.b	ENSGT00510000047270.j	ENSGT00940000159260.h.c.a.a	ENSGT00990000206730.f	ENSGT00530000064743.b.e.a	ENSGT00730000111591.b.f	ENSGT00990000205707	ENSGT00530000064743.b.f	ENSGT00730000111591.b.e	ENSGT00940000154156.c.b	ENSGT01030000234563.a.a.c.a.c.b	ENSGT00950000183004.a.b.a.a.y.a #22	ENSGT00950000182952.C.h.e	ENSGT01030000234563.a.a.c.a.c.a	ENSGT00950000183004.a.b.a.a.y.b #22	ENSGT00950000182952.C.h.f	ENSGT00940000167455.i	ENSGT00940000158382.o.a	ENSGT00940000158177.b.h	ENSGT00940000158968.e.b	ENSGT00940000167455.j	ENSGT00940000158382.o.b	ENSGT00940000157574.u.a	ENSGT00640000091774.b.j	ENSGT00940000164581.A.a.a.h	ENSGT01000000214676.d	ENSGT00880000138031.r.a	ENSGT00950000182976.a.a.d	ENSGT00940000155095.i.b.b.c.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	459															ENSGT01030000234563.a.a.c.a.c.a	ENSGT00950000183004.a.b.a.a.y.b #22	ENSGT00950000182952.C.h.f.b
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2924													ENSOTSG00005026823	impdh1b (ENSOTSG00005026822)	ENSOTSG00005026821	fam3c (ENSOTSG00005026820) #22	btg1 (ENSOTSG00005026819)	STXBP3 (ENSOTSG00005026808)	ENSOTSG00005026792	MCOLN3 (ENSOTSG00005026755)	DNAI3 (ENSOTSG00005026747)	SYDE2 (ENSOTSG00005026742)	zgc:65873 (ENSOTSG00005026737)	DDAH1 (ENSOTSG00005026734)	ENSOTSG00005026733	ccn1 (ENSOTSG00005026732)	ZNHIT6 (ENSOTSG00005026731)	ENSOTSG00005030989	ENSOTSG00005030984	CLCA1 (ENSOTSG00005030540)	lurap1 (ENSOTSG00005030536)
Chinook salmon	MODERN SPECIES	57						ENSOTSG00005024862	ENSOTSG00005024863	si:dkey-5i3.5 (ENSOTSG00005024865)	fam3c (ENSOTSG00005024866) #22	impdh1b (ENSOTSG00005024879)	ENSOTSG00005027020	ENSOTSG00005027021	impdh1b (ENSOTSG00005027023)	ENSOTSG00005027024	ENSOTSG00005027025	fam3c (ENSOTSG00005027026) #22	btg1 (ENSOTSG00005027027)	ENSOTSG00005027028	STXBP3 (ENSOTSG00005027030)	gpsm2l (ENSOTSG00005027060)	MCOLN3 (ENSOTSG00005027154)	DNAI3 (ENSOTSG00005027171)	SYDE2 (ENSOTSG00005027207)	zgc:65873 (ENSOTSG00005027209)	DDAH1 (ENSOTSG00005027211)	ENSOTSG00005027213	ccn1 (ENSOTSG00005027214)	ZNHIT6 (ENSOTSG00005027216)	ENSOTSG00005027218	ENSOTSG00005027222	CLCA1 (ENSOTSG00005027227)
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.a.z #22
Oncorhynchus_a	ANCESTRAL SPECIES	636															ENSGT01030000234563.a.a.c.a.c.b.b	ENSGT00950000183004.a.b.a.a.z #22
Coho salmon	MODERN SPECIES	10						ENSOKIG00005050988	ENSOKIG00005005851	snd1 (ENSOKIG00005005921)	LRRC4 (ENSOKIG00005006529)	ENSOKIG00005006547	ENSOKIG00005006555	ENSOKIG00005006567	ENSOKIG00005006612	ENSOKIG00005006879	ENSOKIG00005006891	fam3c (ENSOKIG00005006911) #22	ENSOKIG00005006943	btg1 (ENSOKIG00005006949)	ENSOKIG00005006958	ENSOKIG00005006965	dcn (ENSOKIG00005006972)	ENSOKIG00005006986	lum (ENSOKIG00005006995)	kera (ENSOKIG00005007007)	epyc (ENSOKIG00005007016)	si:dkeyp-38g8.5 (ENSOKIG00005007040)	si:ch211-244b2.4 (ENSOKIG00005007055)	ENSOKIG00005007068	scyl2 (ENSOKIG00005007097)	ENSOKIG00005007178	FUT9 (ENSOKIG00005007194)
Rainbow trout	MODERN SPECIES	13	sema3aa (ENSOMYG00000020099)	ENSOMYG00000020120	cacna2d1a (ENSOMYG00000073753)	ENSOMYG00000020150	ENSOMYG00000063040	hgfa (ENSOMYG00000050980)	pax4 (ENSOMYG00000020172)	snd1 (ENSOMYG00000020231)	ENSOMYG00000020485	ENSOMYG00000020702	ENSOMYG00000020694	ENSOMYG00000020681	ENSOMYG00000075808	ENSOMYG00000020540	ENSOMYG00000020669	ENSOMYG00000075921 #22	ENSOMYG00000054903	btg1 (ENSOMYG00000020493)	ENSOMYG00000020799	dcn (ENSOMYG00000020811)	lum (ENSOMYG00000020839)	kera (ENSOMYG00000020847)	epyc (ENSOMYG00000020857)	si:dkeyp-38g8.5 (ENSOMYG00000020868)	ENSOMYG00000020878	ENSOMYG00000020885	ENSOMYG00000020932	fut9 (ENSOMYG00000021009)	ENSOMYG00000021015	ENSOMYG00000005587	apaf1 (ENSOMYG00000006669)
Northern pike	MODERN SPECIES	22	prmt8b (ENSELUG00000001782)	tspan11 (ENSELUG00000001783)	sema3aa (ENSELUG00000001784)	ENSELUG00000001786	cacna2d1a (ENSELUG00000001792)	hgfa (ENSELUG00000001794)	pax4 (ENSELUG00000001797)	snd1 (ENSELUG00000001805)	LRRC4 (ENSELUG00000032942)	ENSELUG00000001808	ENSELUG00000029671	si:dkey-5i3.5 (ENSELUG00000001809)	ENSELUG00000001810	impdh1b (ENSELUG00000001819)	ENSELUG00000001825	fam3c (ENSELUG00000001830) #22	btg1 (ENSELUG00000032189)	ENSELUG00000000049	dcn (ENSELUG00000001835)	lum (ENSELUG00000001843)	kera (ENSELUG00000001846)	epyc (ENSELUG00000001849)	si:dkeyp-38g8.5 (ENSELUG00000029910)	si:ch211-244b2.4 (ENSELUG00000001852)	si:ch211-244b2.3 (ENSELUG00000001856)	scyl2 (ENSELUG00000001857)	ENSELUG00000001860	tcp11l2 (ENSELUG00000001862)	ENSELUG00000001863	apaf1 (ENSELUG00000001867)	anks1b (ENSELUG00000001877)
Spotted gar	MODERN SPECIES	674	SYPL1 (ENSLOCG00000015838)	NAMPT (ENSLOCG00000015835)	ENSLOCG00000015833	pik3cg (ENSLOCG00000015829)	PRKAR2B (ENSLOCG00000015827)	hbp1 (ENSLOCG00000015822)	gpr22a (ENSLOCG00000017904)	COG5 (ENSLOCG00000015817)	dus4l (ENSLOCG00000015815)	bcap29 (ENSLOCG00000015812)	slc26a4 (ENSLOCG00000015808)	ENSLOCG00000015806	slc26a3.1 (ENSLOCG00000015805)	cbll1 (ENSLOCG00000015804)	ENSLOCG00000015801	fam3c (ENSLOCG00000015800) #22	wnt16 (ENSLOCG00000015799) #23	ENSLOCG00000015797	CPED1 (ENSLOCG00000015795) #24	ENSLOCG00000015794	ing3 (ENSLOCG00000015792) #25	tspan12 (ENSLOCG00000015791) #26	ENSLOCG00000015789 ##27	FLNC (ENSLOCG00000015781)	ENSLOCG00000015779	ENSLOCG00000015776	sco2 (ENSLOCG00000017903)	ncaph2 (ENSLOCG00000015775)	socs2 (ENSLOCG00000015773)	cradd (ENSLOCG00000015772)	PLXNC1 (ENSLOCG00000015767)
Elephant shark	MODERN SPECIES	1896																fam3c (ENSCMIG00000012576) #22	pus7l (ENSCMIG00000012585)	nup205 (ENSCMIG00000012763)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.a #22
Hagfish	MODERN SPECIES	403	ENSEBUG00000010976	ENSEBUG00000011123	ENSEBUG00000013064	ENSEBUG00000005757	ENSEBUG00000004105	ENSEBUG00000014198	ENSEBUG00000003340	ENSEBUG00000001265	ENSEBUG00000000564	ENSEBUG00000011760	ENSEBUG00000002447	ENSEBUG00000002744	rbbp5 (ENSEBUG00000009691)	RYBP (ENSEBUG00000010088)	ENSEBUG00000005872	fam3c (ENSEBUG00000009355) #22	ENSEBUG00000010245	ENSEBUG00000008626	ENSEBUG00000008713
Lamprey	MODERN SPECIES	522																ENSPMAG00000004975 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.b ##22
Gnathostomata	ANCESTRAL SPECIES	255													ENSGT01090000260929	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000164201	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00390000016511	ENSGT00940000161028
Euteleostomi	ANCESTRAL SPECIES	37	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000164201	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00390000016511	ENSGT00940000161028	ENSGT00940000159975
Sarcopterygii	ANCESTRAL SPECIES	67	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000164201	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00390000002429	ENSGT00950000182952.A.b	ENSGT00940000154829	ENSGT00940000157962	ENSGT00390000007999	ENSGT00940000157806
Tetrapoda	ANCESTRAL SPECIES	28	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT01070000254068	ENSGT00940000158589
Amniota	ANCESTRAL SPECIES		ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT01070000254012	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Sauria	ANCESTRAL SPECIES	2	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c	ENSGT00940000164201	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT01070000254012	ENSGT00940000158589
Lepidosauria	ANCESTRAL SPECIES	4	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c	ENSGT00940000164201	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000161334.g	ENSGT01070000254012	ENSGT01070000254068	ENSGT00940000161334.h	ENSGT00940000158589
Episquamata	ANCESTRAL SPECIES	2	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964.c	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c	ENSGT00940000164201	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT01070000254068	ENSGT00940000161334.h	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Toxicofera	ANCESTRAL SPECIES	9	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964.c	ENSGT00940000160964.d	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c	ENSGT00940000164201	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT01070000254068	ENSGT00940000161334.h	ENSGT00940000161334.g	ENSGT01070000254012	ENSGT00940000158589
Elapidae	ANCESTRAL SPECIES	10	ENSGT00950000183064.b	ENSGT00940000157408.e	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00940000165905	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964.c	ENSGT00940000160964.d	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c.a	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT01070000254068	ENSGT00940000161334.h	ENSGT00940000161334.g	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Elapidae_a	ANCESTRAL SPECIES	64									ENSGT00940000159847	ENSGT00940000160964.c	ENSGT00940000160964.d	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c.a	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890.i	ENSGT00940000157890.j	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT01070000254068	ENSGT00940000161334.h	ENSGT00940000161334.g	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Acanthophiinae	ANCESTRAL SPECIES	58									ENSGT00940000159847	ENSGT00940000160964.c	ENSGT00940000160964.d	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c.a	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890.i	ENSGT00940000157890.j	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT01070000254068	ENSGT00940000161334.h	ENSGT00980000201888	ENSGT00990000211936	ENSGT00940000158589	ENSGT00940000160841
Eastern brown snake	MODERN SPECIES	62															BACE2 (ENSPTXG00000010234)	FAM3B (ENSPTXG00000010236) ##22	MX1 (ENSPTXG00000010245)	TMPRSS2 (ENSPTXG00000010484)	RIPK4 (ENSPTXG00000010486)	PRDM15 (ENSPTXG00000010491)	ZBTB21 (ENSPTXG00000010495)	UMODL1 (ENSPTXG00000010496)	ABCG1 (ENSPTXG00000010497)	ENSPTXG00000010499	ENSPTXG00000010500	ENSPTXG00000010501	TMPRSS3 (ENSPTXG00000010502)	UBASH3A (ENSPTXG00000010504)	SLC37A1 (ENSPTXG00000010543)	PDE9A (ENSPTXG00000010544)	ENSPTXG00000010545
Mainland tiger snake	MODERN SPECIES	58									SH3BGR (ENSNSUG00000007181)	ENSNSUG00000007184	ENSNSUG00000007186	ENSNSUG00000007187	PCP4 (ENSNSUG00000007189)	DSCAM (ENSNSUG00000007191)	BACE2 (ENSNSUG00000007201)	FAM3B (ENSNSUG00000007202) ##22	MX1 (ENSNSUG00000007203)	TMPRSS2 (ENSNSUG00000007292)	RIPK4 (ENSNSUG00000007293)	ENSNSUG00000007308	ENSNSUG00000007312	C2CD2 (ENSNSUG00000007317)	ZBTB21 (ENSNSUG00000007320)	ENSNSUG00000007322	ABCG1 (ENSNSUG00000007324)	ENSNSUG00000007327	TFF2 (ENSNSUG00000007328)	ENSNSUG00000007329	ENSNSUG00000007331	TMPRSS3 (ENSNSUG00000007332)	UBASH3A (ENSNSUG00000007336)
Blue-lipped sea krait	MODERN SPECIES	8649																FAM3B (ENSLLTG00000005976) ##22
Indian cobra	MODERN SPECIES	4	KCNJ15 (ENSNNAG00000015348)	ERG (ENSNNAG00000015103)	ETS2 (ENSNNAG00000015067)	ENSNNAG00000015057	ENSNNAG00000015024	ENSNNAG00000015010	ENSNNAG00000014992	GET1 (ENSNNAG00000014983)	LCA5L (ENSNNAG00000014964)	SH3BGR (ENSNNAG00000014946)	ENSNNAG00000014931	ENSNNAG00000014920	PCP4 (ENSNNAG00000014905)	DSCAM (ENSNNAG00000014616)	BACE2 (ENSNNAG00000014576)	FAM3B (ENSNNAG00000014550) ##22	ENSNNAG00000014530	ENSNNAG00000014519	TMPRSS2 (ENSNNAG00000014479)	RIPK4 (ENSNNAG00000014451)	PRDM15 (ENSNNAG00000014280)	C2CD2 (ENSNNAG00000014209)	ZBTB21 (ENSNNAG00000014183)	ENSNNAG00000014168	ENSNNAG00000014142	ABCG1 (ENSNNAG00000014043)	ENSNNAG00000014021	ENSNNAG00000014012	ENSNNAG00000014007	ENSNNAG00000013990	TMPRSS3 (ENSNNAG00000013964)
Lizard	MODERN SPECIES	2	BRWD1 (ENSACAG00000005460)	GET1 (ENSACAG00000005451)	LCA5L (ENSACAG00000005442)	SH3BGR (ENSACAG00000005419)	ENSACAG00000037146	ENSACAG00000005416	ENSACAG00000037008	ENSACAG00000005415	ENSACAG00000028616	ENSACAG00000036222	ENSACAG00000042918	DSCAM (ENSACAG00000005358)	ENSACAG00000041995	ENSACAG00000045102	BACE2 (ENSACAG00000005800)	FAM3B (ENSACAG00000001496) ##22	ENSACAG00000023592	MX1 (ENSACAG00000005450)	TMPRSS2 (ENSACAG00000005446)	RIPK4 (ENSACAG00000005401)	ENSACAG00000035551	ENSACAG00000005374	C2CD2 (ENSACAG00000003189)	ZBTB21 (ENSACAG00000003185)	UMODL1 (ENSACAG00000003165)	ENSACAG00000038608	ABCG1 (ENSACAG00000003056)	ENSACAG00000027433	ENSACAG00000003033	ENSACAG00000042608	ENSACAG00000044509
Laterata	ANCESTRAL SPECIES		ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964.c	ENSGT00940000163947	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT01070000254068	ENSGT00940000161334.h	ENSGT00980000201888	ENSGT00940000161334.g	ENSGT01070000254012	ENSGT00940000158589
Common wall lizard	MODERN SPECIES	12	DYRK1A (ENSPMRG00000021041)	KCNJ6 (ENSPMRG00000021055)	KCNJ15 (ENSPMRG00000021059)	ERG (ENSPMRG00000021074)	ETS2 (ENSPMRG00000021097)	BRWD1 (ENSPMRG00000021108)	GET1 (ENSPMRG00000021140)	LCA5L (ENSPMRG00000021152)	SH3BGR (ENSPMRG00000021165)	B3GALT5 (ENSPMRG00000021171)	ENSPMRG00000021172	ENSPMRG00000021180	PCP4 (ENSPMRG00000021191)	DSCAM (ENSPMRG00000021325)	BACE2 (ENSPMRG00000021807)	FAM3B (ENSPMRG00000021816) ##22	MX1 (ENSPMRG00000021831)	TMPRSS2 (ENSPMRG00000021850)	ENSPMRG00000021866	ENSPMRG00000021882	PRDM15 (ENSPMRG00000021892)	C2CD2 (ENSPMRG00000021944)	ZBTB21 (ENSPMRG00000021961)	UMODL1 (ENSPMRG00000021978)	ABCG1 (ENSPMRG00000022041)	ENSPMRG00000022054	TFF2 (ENSPMRG00000022069)	ENSPMRG00000022075	ENSPMRG00000022081	TMPRSS3 (ENSPMRG00000022090)	UBASH3A (ENSPMRG00000022100)
Argentine black and white tegu	MODERN SPECIES		ENSSMRG00000022998	KCNJ15 (ENSSMRG00000022997)	ERG (ENSSMRG00000022995)	ETS2 (ENSSMRG00000022993)	BRWD1 (ENSSMRG00000022992)	ENSSMRG00000022983	ENSSMRG00000022982	LCA5L (ENSSMRG00000022981)	SH3BGR (ENSSMRG00000022980)	ENSSMRG00000022979	B3GALT5 (ENSSMRG00000022978)	ENSSMRG00000022977	PCP4 (ENSSMRG00000022976)	DSCAM (ENSSMRG00000022942)	BACE2 (ENSSMRG00000022940)	FAM3B (ENSSMRG00000022939) ##22	ENSSMRG00000022938	ENSSMRG00000022937	TMPRSS2 (ENSSMRG00000022936)	ENSSMRG00000022935	RIPK4 (ENSSMRG00000022933)	PRDM15 (ENSSMRG00000022932)	C2CD2 (ENSSMRG00000022931)	ZBTB21 (ENSSMRG00000022929)	UMODL1 (ENSSMRG00000022928)	ABCG1 (ENSSMRG00000022927)	ENSSMRG00000022926	ENSSMRG00000022925	ENSSMRG00000022924	ENSSMRG00000022923	TMPRSS3 (ENSSMRG00000022922)
tuatara	MODERN SPECIES	318															BACE2 (ENSSPUG00000002995)	FAM3B (ENSSPUG00000003037) ##22	ENSSPUG00000003071	ENSSPUG00000003093	MDFIC (ENSSPUG00000003126)	FOXP2 (ENSSPUG00000003160)
Archelosauria	ANCESTRAL SPECIES		ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT01070000254012	ENSGT00940000158589
Cryptodira	ANCESTRAL SPECIES		ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000185616	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334.j	ENSGT00940000158589	ENSGT00940000160841
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000185616	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c.f	ENSGT00940000155686.c.e	ENSGT00940000155686.d.b	ENSGT00940000155686.d.a	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334.j	ENSGT01070000254012
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000154465.C	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c.f	ENSGT00940000155686.c.e	ENSGT00940000155686.d.b	ENSGT00940000155686.d.a	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334.j	ENSGT01070000254012
Goode s thornscrub tortoise	MODERN SPECIES		VPS26C (ENSGEVG00005003088)	DYRK1A (ENSGEVG00005003065)	KCNJ6 (ENSGEVG00005003053)	KCNJ15 (ENSGEVG00005003045)	ERG (ENSGEVG00005002947)	ETS2 (ENSGEVG00005002886)	PSMG1 (ENSGEVG00005002870)	BRWD1 (ENSGEVG00005002258)	GET1 (ENSGEVG00005001943)	LCA5L (ENSGEVG00005001928)	SH3BGR (ENSGEVG00005001914)	B3GALT5 (ENSGEVG00005001907)	PCP4 (ENSGEVG00005001894)	DSCAM (ENSGEVG00005001860)	BACE2 (ENSGEVG00005001818)	FAM3B (ENSGEVG00005001801) ##22	ENSGEVG00005001700	ENSGEVG00005001600	ENSGEVG00005001562	ENSGEVG00005001544	RIPK4 (ENSGEVG00005001522)	ENSGEVG00005001504	PRDM15 (ENSGEVG00005001471)	C2CD2 (ENSGEVG00005001430)	ZBTB21 (ENSGEVG00005001414)	ENSGEVG00005001398	ABCG1 (ENSGEVG00005001379)	TFF2 (ENSGEVG00005001355)	ENSGEVG00005001325	TMPRSS3 (ENSGEVG00005001298)	UBASH3A (ENSGEVG00005001268)
Abingdon island giant tortoise	MODERN SPECIES	1623														DSCAM (ENSCABG00000015491)	BACE2 (ENSCABG00000015496)	FAM3B (ENSCABG00000015500) ##22	ARHGAP5 (ENSCABG00000015502)	ENSCABG00000015503	ENSCABG00000015504 #17	FEZF1 (ENSCABG00000015505) #19	AASS (ENSCABG00000015506) #20	ENSCABG00000015507 #21	ENSCABG00000015509 #21	ENSCABG00000015513
Emydidae	ANCESTRAL SPECIES	28	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000185616	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.c.e	ENSGT00940000155686.d.b	ENSGT00940000155686.d.a	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a.e	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT01070000254068	ENSGT00940000161334.j	ENSGT01070000254012
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	10	ENSTMTG00000016213	ENSTMTG00000016204	ENSTMTG00000016192	ENSTMTG00000015909	ENSTMTG00000015878	ENSTMTG00000015865	ENSTMTG00000015854	ENSTMTG00000015835	ENSTMTG00000015816	ENSTMTG00000015810	ENSTMTG00000015795	ENSTMTG00000015787	ENSTMTG00000015776	ENSTMTG00000015467	ENSTMTG00000015422	ENSTMTG00000015411 ##22	ENSTMTG00000015076	ENSTMTG00000015041	ENSTMTG00000015032	ENSTMTG00000014978	ENSTMTG00000014957	ENSTMTG00000014933	ENSTMTG00000014892	ENSTMTG00000014819	ENSTMTG00000014802	ENSTMTG00000014732	ENSTMTG00000014703	ENSTMTG00000014694	TFF2 (ENSTMTG00000014687)	ENSTMTG00000014672	ENSTMTG00000014661
Three-toed box turtle	MODERN SPECIES	11	ENSTMTG00000022091	ENSTMTG00000022082	ENSTMTG00000022077	ENSTMTG00000022076	ENSTMTG00000022073	ENSTMTG00000022067	ENSTMTG00000022062	ENSTMTG00000022059	ENSTMTG00000021797	ENSTMTG00000021738	ENSTMTG00000021734	ENSTMTG00000021729	ENSTMTG00000021726	ENSTMTG00000021646	ENSTMTG00000021626	ENSTMTG00000021619 ##22	ENSTMTG00000021585	ENSTMTG00000021576	ENSTMTG00000021573	ENSTMTG00000021559	ENSTMTG00000021556	ENSTMTG00000021549	ENSTMTG00000021533	ENSTMTG00000021482	ENSTMTG00000021448	ENSTMTG00000021439	ENSTMTG00000021417	ENSTMTG00000021408	ENSTMTG00000021397	ENSTMTG00000021391	ENSTMTG00000021373
painted turtle	MODERN SPECIES	2389	KCNJ6 (ENSCPBG00000012397)	KCNJ15 (ENSCPBG00000012399)	ERG (ENSCPBG00000012403)	ETS2 (ENSCPBG00000012415)	PSMG1 (ENSCPBG00000012418)	BRWD1 (ENSCPBG00000012420)	ENSCPBG00000012425	GET1 (ENSCPBG00000012428)	LCA5L (ENSCPBG00000012429)	SH3BGR (ENSCPBG00000012430)	B3GALT5 (ENSCPBG00000012433)	IGSF5 (ENSCPBG00000012436)	PCP4 (ENSCPBG00000012442)	DSCAM (ENSCPBG00000012456)	BACE2 (ENSCPBG00000012845)	FAM3B (ENSCPBG00000012846) ##22	ENSCPBG00000012848	ENSCPBG00000012852	ENSCPBG00000012892	TMPRSS2 (ENSCPBG00000012905)	RIPK4 (ENSCPBG00000012906)	ENSCPBG00000012908	PRDM15 (ENSCPBG00000012917)	C2CD2 (ENSCPBG00000012921)	ZBTB21 (ENSCPBG00000012923)	UMODL1 (ENSCPBG00000012927)	ABCG1 (ENSCPBG00000012934)	TFF3 (ENSCPBG00000012936)	PDE9A (ENSCPBG00000012938)	WDR4 (ENSCPBG00000012943)	ENSCPBG00000012948
Chinese turtle	MODERN SPECIES	1640													ENSPSIG00000016397	ENSPSIG00000016399	BACE2 (ENSPSIG00000009969)	FAM3B (ENSPSIG00000010681) ##22	ENSPSIG00000011129	ENSPSIG00000015810	TMPRSS2 (ENSPSIG00000017551)	RIPK4 (ENSPSIG00000006258)	ENSPSIG00000006452	PRDM15 (ENSPSIG00000006944)	C2CD2 (ENSPSIG00000008473)	ZBTB21 (ENSPSIG00000000652)	ENSPSIG00000008846	ENSPSIG00000008853
Archosauria	ANCESTRAL SPECIES	2	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686.c	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT01070000254012	ENSGT00940000158589
Aves	ANCESTRAL SPECIES		ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT01070000254012	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Neognathae	ANCESTRAL SPECIES	1	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Neognathae_b	ANCESTRAL SPECIES		ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589.c	ENSGT00940000158589.d	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b
Passeroidea	ANCESTRAL SPECIES	10	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589.c	ENSGT00940000158589.d	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b
Zebra finch	MODERN SPECIES		DYRK1A (ENSTGUG00000004960)	KCNJ6 (ENSTGUG00000004993)	KCNJ15 (ENSTGUG00000004997)	ERG (ENSTGUG00000004998)	ETS2 (ENSTGUG00000005028)	PSMG1 (ENSTGUG00000005059)	BRWD1 (ENSTGUG00000005062)	HMGN1 (ENSTGUG00000005112)	GET1 (ENSTGUG00000005116)	SH3BGR (ENSTGUG00000005133)	ENSTGUG00000005124	B3GALT5 (ENSTGUG00000005144)	ENSTGUG00000021600	PCP4 (ENSTGUG00000005150)	BACE2 (ENSTGUG00000005268)	FAM3B (ENSTGUG00000005255) ##22	MX1 (ENSTGUG00000005326)	TMPRSS2 (ENSTGUG00000005348)	RIPK4 (ENSTGUG00000005420)	PRDM15 (ENSTGUG00000005437)	C2CD2 (ENSTGUG00000005496)	ZBTB21 (ENSTGUG00000005526)	UMODL1 (ENSTGUG00000005528)	ABCG1 (ENSTGUG00000005541)	TFF2 (ENSTGUG00000005579)	TMPRSS3 (ENSTGUG00000005582)	UBASH3A (ENSTGUG00000005618)	RSPH1 (ENSTGUG00000005646)	SLC37A1 (ENSTGUG00000005671)	PDE9A (ENSTGUG00000005695)	WDR4 (ENSTGUG00000005733)
Common canary	MODERN SPECIES	11	VPS26C (ENSSCAG00000010780)	ENSSCAG00000010806	ENSSCAG00000010829	PIGP (ENSSCAG00000010835)	ENSSCAG00000010840	ENSSCAG00000010846	ENSSCAG00000010856	RCAN1 (ENSSCAG00000010862)	KCNE1 (ENSSCAG00000010868)	CBR1 (ENSSCAG00000010872)	SETD4 (ENSSCAG00000010875)	IGSF5 (ENSSCAG00000010884)	PCP4 (ENSSCAG00000010888)	DSCAM (ENSSCAG00000010895)	BACE2 (ENSSCAG00000010911)	FAM3B (ENSSCAG00000010915) ##22	MX1 (ENSSCAG00000010924)	TMPRSS2 (ENSSCAG00000010931)	RIPK4 (ENSSCAG00000010937)	PRDM15 (ENSSCAG00000010947)	C2CD2 (ENSSCAG00000010957)	ZBTB21 (ENSSCAG00000010963)	ENSSCAG00000010967	ABCG1 (ENSSCAG00000010972)	TFF2 (ENSSCAG00000010978)	TMPRSS3 (ENSSCAG00000010983)	UBASH3A (ENSSCAG00000010991)	RSPH1 (ENSSCAG00000011006)	SLC37A1 (ENSSCAG00000011016)	PDE9A (ENSSCAG00000011039)	WDR4 (ENSSCAG00000011104)
Medium ground finch	MODERN SPECIES	141															BACE2 (ENSGFOG00000014562)	FAM3B (ENSGFOG00000014554) ##22	MX1 (ENSGFOG00000014552)	TMPRSS2 (ENSGFOG00000014548)	RIPK4 (ENSGFOG00000014546)	PRDM15 (ENSGFOG00000014544)	C2CD2 (ENSGFOG00000014541)	ZBTB21 (ENSGFOG00000014540)	ENSGFOG00000014538	ABCG1 (ENSGFOG00000014537)	TFF2 (ENSGFOG00000014536)	ENSGFOG00000014535	ENSGFOG00000014534	UBASH3A (ENSGFOG00000014531)	RSPH1 (ENSGFOG00000014528)	SLC37A1 (ENSGFOG00000014521)	PDE9A (ENSGFOG00000014513)
Flycatcher	MODERN SPECIES		KCNJ6 (ENSFALG00000023707)	KCNJ15 (ENSFALG00000025214)	ERG (ENSFALG00000005094)	ETS2 (ENSFALG00000026706)	ENSFALG00000026279	PSMG1 (ENSFALG00000005056)	BRWD1 (ENSFALG00000005039)	GET1 (ENSFALG00000028042)	ENSFALG00000005019	SH3BGR (ENSFALG00000005014)	B3GALT5 (ENSFALG00000005008)	IGSF5 (ENSFALG00000005004)	PCP4 (ENSFALG00000025034)	DSCAM (ENSFALG00000004983)	BACE2 (ENSFALG00000029036)	FAM3B (ENSFALG00000002111) ##22	MX1 (ENSFALG00000002094)	TMPRSS2 (ENSFALG00000002079)	RIPK4 (ENSFALG00000002070)	PRDM15 (ENSFALG00000002064)	ENSFALG00000002057	ZBTB21 (ENSFALG00000002056)	ENSFALG00000028853	ENSFALG00000028291	ABCG1 (ENSFALG00000002052)	TFF2 (ENSFALG00000002051)	TMPRSS3 (ENSFALG00000002042)	UBASH3A (ENSFALG00000002028)	RSPH1 (ENSFALG00000002230)	SLC37A1 (ENSFALG00000001964)	PDE9A (ENSFALG00000001967)
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b
Golden eagle	MODERN SPECIES	23	KCNJ6 (ENSACCG00020006608)	KCNJ15 (ENSACCG00020006619)	ERG (ENSACCG00020006656)	ETS2 (ENSACCG00020006692)	PSMG1 (ENSACCG00020006704)	BRWD1 (ENSACCG00020006729)	ENSACCG00020006775	GET1 (ENSACCG00020006786)	LCA5L (ENSACCG00020006800)	SH3BGR (ENSACCG00020006813)	B3GALT5 (ENSACCG00020006827)	IGSF5 (ENSACCG00020006845)	PCP4 (ENSACCG00020006869)	DSCAM (ENSACCG00020007031)	BACE2 (ENSACCG00020007183)	FAM3B (ENSACCG00020007233) ##22	MX1 (ENSACCG00020007248)	TMPRSS2 (ENSACCG00020007290)	RIPK4 (ENSACCG00020007325)	ENSACCG00020007388	PRDM15 (ENSACCG00020007436)	C2CD2 (ENSACCG00020007512)	ZBTB21 (ENSACCG00020007548)	UMODL1 (ENSACCG00020007566)	ABCG1 (ENSACCG00020007594)	TFF2 (ENSACCG00020007620)	TMPRSS3 (ENSACCG00020007654)	UBASH3A (ENSACCG00020007674)	RSPH1 (ENSACCG00020007688)	SLC37A1 (ENSACCG00020007707)	PDE9A (ENSACCG00020007792)
Kakapo	MODERN SPECIES	11	VPS26C (ENSSHBG00005017954)	DYRK1A (ENSSHBG00005017956)	KCNJ6 (ENSSHBG00005017962)	KCNJ15 (ENSSHBG00005017964)	ERG (ENSSHBG00005017966)	ETS2 (ENSSHBG00005017977)	PSMG1 (ENSSHBG00005017979)	BRWD1 (ENSSHBG00005018061)	ENSSHBG00005019123	ENSSHBG00005019126	SH3BGR (ENSSHBG00005019130)	B3GALT5 (ENSSHBG00005019133)	PCP4 (ENSSHBG00005019137)	DSCAM (ENSSHBG00005019146)	BACE2 (ENSSHBG00005019201)	FAM3B (ENSSHBG00005019204) ##22	MX1 (ENSSHBG00005019205)	TMPRSS2 (ENSSHBG00005019207)	RIPK4 (ENSSHBG00005019208)	ENSSHBG00005019212	PRDM15 (ENSSHBG00005019220)	C2CD2 (ENSSHBG00005019235)	ZBTB21 (ENSSHBG00005019241)	ENSSHBG00005019243	ABCG1 (ENSSHBG00005019254)	TFF2 (ENSSHBG00005019267)	TMPRSS3 (ENSSHBG00005019269)	UBASH3A (ENSSHBG00005019270)	RSPH1 (ENSSHBG00005019277)	SLC37A1 (ENSSHBG00005019286)	PDE9A (ENSSHBG00005019339)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Anatidae	ANCESTRAL SPECIES	6	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00940000164489	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947.a	ENSGT00530000064267.a	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686.d	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Pink-footed goose	MODERN SPECIES	92	ENSABRG00000007532	KCNJ15 (ENSABRG00000007567)	ERG (ENSABRG00000007601)	ETS2 (ENSABRG00000007653)	PSMG1 (ENSABRG00000007673)	BRWD1 (ENSABRG00000007702)	ENSABRG00000007815	GET1 (ENSABRG00000007894)	LCA5L (ENSABRG00000007911)	SH3BGR (ENSABRG00000007927)	B3GALT5 (ENSABRG00000007941)	IGSF5 (ENSABRG00000007955)	PCP4 (ENSABRG00000007977)	DSCAM (ENSABRG00000008016)	BACE2 (ENSABRG00000008215)	FAM3B (ENSABRG00000008237) ##22	MX2 (ENSABRG00000008287)	ENSABRG00000008382	TMPRSS2 (ENSABRG00000008407)	RIPK4 (ENSABRG00000008447)	ENSABRG00000008465	PRDM15 (ENSABRG00000008548)	C2CD2 (ENSABRG00000008747)	ZBTB21 (ENSABRG00000008780)	UMODL1 (ENSABRG00000008812)
Duck	MODERN SPECIES		NHS (ENSAPLG00000011104)	ENSAPLG00000030010	RAI2 (ENSAPLG00000026209)	SCML2 (ENSAPLG00000010725)	CDKL5 (ENSAPLG00000010656)	RS1 (ENSAPLG00000010522)	PPEF1 (ENSAPLG00000010050)	PHKA2 (ENSAPLG00000009522)	ADGRG2 (ENSAPLG00000008909)	ENSAPLG00000008450	MAP3K15 (ENSAPLG00000007410)	SH3KBP1 (ENSAPLG00000007164)	BCLAF3 (ENSAPLG00000005332)	MAP7D2 (ENSAPLG00000005077)	EIF1AX (ENSAPLG00000029362)	FAM3B (ENSAPLG00000015920) ##22	MX1 (ENSAPLG00000015976)	TMPRSS2 (ENSAPLG00000016160)	RIPK4 (ENSAPLG00000016253)	ENSAPLG00000001186	PRDM15 (ENSAPLG00000001239)	C2CD2 (ENSAPLG00000001983)	ZBTB21 (ENSAPLG00000000767)	ENSAPLG00000002409	ABCG1 (ENSAPLG00000008841)	TFF2 (ENSAPLG00000020197)	TMPRSS3 (ENSAPLG00000008634)	UBASH3A (ENSAPLG00000008138)	RSPH1 (ENSAPLG00000007969)	SLC37A1 (ENSAPLG00000007435)	PDE9A (ENSAPLG00000007348)
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000164201	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00730000113741	ENSGT00940000160131	ENSGT00940000161334	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b
Turkey	MODERN SPECIES		BRWD1 (ENSMGAG00000014556)	GET1 (ENSMGAG00000014558)	LCA5L (ENSMGAG00000014559)	SH3BGR (ENSMGAG00000014561)	B3GALT5 (ENSMGAG00000022407)	IGSF5 (ENSMGAG00000014560)	DSCAM (ENSMGAG00000014563)	ENSMGAG00000016169	ENSMGAG00000014569	ENSMGAG00000020084	ENSMGAG00000014568	ENSMGAG00000014566	ENSMGAG00000014565	ENSMGAG00000017801	ENSMGAG00000014567	ENSMGAG00000014572 ##22	ENSMGAG00000014564	ENSMGAG00000014604	ENSMGAG00000014606	ENSMGAG00000014605	EFHC2 (ENSMGAG00000014603)	ENSMGAG00000014602	ENSMGAG00000017681	ENSMGAG00000014601	ENSMGAG00000017006	ENSMGAG00000014599	ENSMGAG00000014597	ENSMGAG00000017291	ENSMGAG00000014596	ENSMGAG00000014594	ENSMGAG00000019240
Chicken	MODERN SPECIES		KCNJ6 (ENSGALG00010013205)	KCNJ15 (ENSGALG00010013304)	ERG (ENSGALG00010013330)	ETS2 (ENSGALG00010013349)	PSMG1 (ENSGALG00010013375)	BRWD1 (ENSGALG00010014738)	HMGN1 (ENSGALG00010013391)	WRB (ENSGALG00010013413)	LCA5L (ENSGALG00010013449)	SH3BGR (ENSGALG00010013457)	B3GALT5 (ENSGALG00010013492)	IGSF5 (ENSGALG00010013504)	PCP4 (ENSGALG00010013549)	DSCAM (ENSGALG00010013589)	BACE2 (ENSGALG00010013650)	FAM3B (ENSGALG00010013758) ##22	ENSGALG00010013778	MX1 (ENSGALG00010013809)	TMPRSS2 (ENSGALG00010013833)	RIPK4 (ENSGALG00010010941)	PRDM15 (ENSGALG00010010948)	C2CD2 (ENSGALG00010010991)	ZBTB21 (ENSGALG00010010982)	UMODL1 (ENSGALG00010011004)	ENSGALG00010011074	ABCG1 (ENSGALG00010011104)	TFF3 (ENSGALG00010011115)	TMPRSS3 (ENSGALG00010011125)	UBASH3A (ENSGALG00010011139)	RSPH1 (ENSGALG00010011185)	SLC37A1 (ENSGALG00010011211)
Japanese quail	MODERN SPECIES		KCNJ15 (ENSCJPG00005007938)	ERG (ENSCJPG00005007939)	ETS2 (ENSCJPG00005007967)	PSMG1 (ENSCJPG00005007970)	BRWD1 (ENSCJPG00005007977)	ENSCJPG00005008183	GET1 (ENSCJPG00005008185)	LCA5L (ENSCJPG00005008251)	SH3BGR (ENSCJPG00005008263)	B3GALT5 (ENSCJPG00005008266)	IGSF5 (ENSCJPG00005008268)	PCP4 (ENSCJPG00005008270)	DSCAM (ENSCJPG00005008335)	ENSCJPG00005008648	BACE2 (ENSCJPG00005008649)	FAM3B (ENSCJPG00005008650) ##22	MX2 (ENSCJPG00005008653)	TMPRSS2 (ENSCJPG00005008655)	RIPK4 (ENSCJPG00005008656)	PRDM15 (ENSCJPG00005008658)	C2CD2 (ENSCJPG00005008685)	ZBTB21 (ENSCJPG00005008686)	UMODL1 (ENSCJPG00005008688)	ABCG1 (ENSCJPG00005008689)	TFF2 (ENSCJPG00005008691)	TMPRSS3 (ENSCJPG00005008707)	UBASH3A (ENSCJPG00005008708)	RSPH1 (ENSCJPG00005008709)	SLC37A1 (ENSCJPG00005008710)	PDE9A (ENSCJPG00005008711)	WDR4 (ENSCJPG00005008712)
African ostrich	MODERN SPECIES	769	KCNJ6 (ENSSCUG00000011913)	KCNJ15 (ENSSCUG00000011919)	ERG (ENSSCUG00000011922)	ETS2 (ENSSCUG00000011923)	PSMG1 (ENSSCUG00000011926)	ENSSCUG00000011927	ENSSCUG00000011932	GET1 (ENSSCUG00000011935)	LCA5L (ENSSCUG00000011937)	SH3BGR (ENSSCUG00000011939)	B3GALT5 (ENSSCUG00000011940)	ENSSCUG00000011943	PCP4 (ENSSCUG00000011946)	DSCAM (ENSSCUG00000011964)	BACE2 (ENSSCUG00000012025)	FAM3B (ENSSCUG00000012033) ##22	MX1 (ENSSCUG00000012037)	TMPRSS2 (ENSSCUG00000012041)	RIPK4 (ENSSCUG00000012044)	ENSSCUG00000012048	PRDM15 (ENSSCUG00000012056)	C2CD2 (ENSSCUG00000012063)	ZBTB21 (ENSSCUG00000012066)	ENSSCUG00000012067	ABCG1 (ENSSCUG00000012073)	TFF2 (ENSSCUG00000012074)	ENSSCUG00000012076	TMPRSS3 (ENSSCUG00000012081)	UBASH3A (ENSSCUG00000012087)	RSPH1 (ENSSCUG00000012092)	SLC37A1 (ENSSCUG00000012095)
Australian saltwater crocodile	MODERN SPECIES	27	KCNJ6 (ENSCPRG00005015758)	KCNJ15 (ENSCPRG00005015763)	ERG (ENSCPRG00005015767)	ETS2 (ENSCPRG00005015772)	PSMG1 (ENSCPRG00005015780)	BRWD1 (ENSCPRG00005015859)	ENSCPRG00005016019	ENSCPRG00005016020	LCA5L (ENSCPRG00005016022)	ENSCPRG00005016025	ENSCPRG00005016026	B3GALT5 (ENSCPRG00005016029)	PCP4 (ENSCPRG00005016038)	DSCAM (ENSCPRG00005016058)	BACE2 (ENSCPRG00005016096)	FAM3B (ENSCPRG00005016105) ##22	ENSCPRG00005016122	ENSCPRG00005016133	ENSCPRG00005016141	TMPRSS2 (ENSCPRG00005016148)	RIPK4 (ENSCPRG00005016165)	ENSCPRG00005016167	PRDM15 (ENSCPRG00005016176)	C2CD2 (ENSCPRG00005016182)	ZBTB21 (ENSCPRG00005016188)	UMODL1 (ENSCPRG00005016194)	ABCG1 (ENSCPRG00005016219)	TMPRSS3 (ENSCPRG00005016234)	UBASH3A (ENSCPRG00005016241)	RSPH1 (ENSCPRG00005016260)	SLC37A1 (ENSCPRG00005016286)
Mammalia	ANCESTRAL SPECIES		ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.D	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT01070000254012	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Theria	ANCESTRAL SPECIES	1	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.D	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Marsupialia	ANCESTRAL SPECIES	23	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00940000156253	ENSGT00940000158923	ENSGT00950000183107.a.b.a	ENSGT00950000182802.D	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000154829	ENSGT00940000157962	ENSGT00390000007999	ENSGT00940000157806	ENSGT00890000139503	ENSGT00940000162802	ENSGT00870000136493.c	ENSGT00940000161940
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000154826	ENSGT00390000011821.b	ENSGT00950000182836.b.b.b.a.a	ENSGT00500000044950	ENSGT00940000156253	ENSGT00940000158923	ENSGT00950000183107.a.b.a	ENSGT00950000182802.D	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000154829	ENSGT00940000157962	ENSGT00390000007999	ENSGT00940000157806	ENSGT00890000139503	ENSGT00940000162802	ENSGT00870000136493.c	ENSGT00940000161940
Diprotodontia	ANCESTRAL SPECIES	32	ENSGT00390000003874	ENSGT00940000154826	ENSGT00390000011821.b	ENSGT00950000182836.b.b.b.a.a	ENSGT00500000044950	ENSGT00940000156253	ENSGT00940000158923	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000154829	ENSGT00940000157962	ENSGT00390000007999	ENSGT00940000157806	ENSGT00890000139503	ENSGT00940000162802	ENSGT00940000161940	ENSGT00940000158977	ENSGT00950000183030.m.a.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	31	ENSGT00390000003874	ENSGT00940000154826.bc	ENSGT00390000011821.b	ENSGT00950000182836.b.b.b.a.a	ENSGT00500000044950	ENSGT00940000156253	ENSGT00940000158923	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964.i	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00870000136508.c.b	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000154829	ENSGT00940000157962	ENSGT00390000007999	ENSGT00940000157806	ENSGT00890000139503	ENSGT00940000162802	ENSGT00940000161940	ENSGT00940000158977	ENSGT00950000183030.m.a.a.a.b
Common wonbat	MODERN SPECIES	1120	ENSVURG00010023246	PSMG1 (ENSVURG00010023242)	GRIK1 (ENSVURG00010022936)	BACH1 (ENSVURG00010022808)	ENSVURG00010022806	BRWD1 (ENSVURG00010020972)	GET1 (ENSVURG00010020815)	LCA5L (ENSVURG00010020810)	SH3BGR (ENSVURG00010020806)	ENSVURG00010020804	ENSVURG00010020802	PCP4 (ENSVURG00010020798)	DSCAM (ENSVURG00010020750)	ENSVURG00010020735	BACE2 (ENSVURG00010020728)	FAM3B (ENSVURG00010020723) ##22	TMPRSS2 (ENSVURG00010020641)	RIPK4 (ENSVURG00010020636)	PRDM15 (ENSVURG00010020621)	C2CD2 (ENSVURG00010020605)	ZBTB21 (ENSVURG00010020588)	ENSVURG00010020582	ENSVURG00010020564	ENSVURG00010020560	ENSVURG00010020553	USP25 (ENSVURG00010020504)	NRIP1 (ENSVURG00010020486)	SAMSN1 (ENSVURG00010020469)	HSPA13 (ENSVURG00010020464)	ENSVURG00010011644	ENSVURG00010011224
koala	MODERN SPECIES	285															BACE2 (ENSPCIG00000036487)	FAM3B (ENSPCIG00000010997) ##22	TMPRSS2 (ENSPCIG00000010999)	RIPK4 (ENSPCIG00000011000)	ENSPCIG00000011003	PRDM15 (ENSPCIG00000011005)	C2CD2 (ENSPCIG00000011008)	ZBTB21 (ENSPCIG00000036467)	ENSPCIG00000011012	ENSPCIG00000030908	USP25 (ENSPCIG00000022945)	NRIP1 (ENSPCIG00000014945)
Wallaby	MODERN SPECIES	8996																ENSMEUG00000003634 ##22
Opossum	MODERN SPECIES	3	ERG (ENSMODG00000020980)	ETS2 (ENSMODG00000020979)	PSMG1 (ENSMODG00000043453)	GRIK1 (ENSMODG00000020977)	ENSMODG00000020976	ENSMODG00000020974	BRWD1 (ENSMODG00000020973)	ENSMODG00000020972	WRB (ENSMODG00000040658)	LCA5L (ENSMODG00000020970)	SH3BGR (ENSMODG00000020969)	B3GALT5 (ENSMODG00000038204)	PCP4 (ENSMODG00000020967)	DSCAM (ENSMODG00000020965)	BACE2 (ENSMODG00000020963)	FAM3B (ENSMODG00000020962) ##22	TMPRSS2 (ENSMODG00000020961)	RIPK4 (ENSMODG00000020960)	ENSMODG00000044893	PRDM15 (ENSMODG00000020959)	ENSMODG00000037980	ENSMODG00000020954	ENSMODG00000025438	ENSMODG00000020951	SAMSN1 (ENSMODG00000020950)	HSPA13 (ENSMODG00000020949)
Eutheria	ANCESTRAL SPECIES	5	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000011549	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000011549	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Primates	ANCESTRAL SPECIES	1	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.a	ENSGT00390000011549	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.a	ENSGT00390000011549	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.a.e.a.a.a	ENSGT00390000011549	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.a.e.a.a.a	ENSGT00390000011549	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.a.e.a.a.a	ENSGT00390000011549	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Hominidae	ANCESTRAL SPECIES	25	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Gorilla	MODERN SPECIES	12	ENSGGOG00000036523	KCNJ15 (ENSGGOG00000038780)	ERG (ENSGGOG00000011391)	ETS2 (ENSGGOG00000015464)	PSMG1 (ENSGGOG00000005681)	BRWD1 (ENSGGOG00000002545)	ENSGGOG00000013672	GET1 (ENSGGOG00000013144)	LCA5L (ENSGGOG00000013149)	ENSGGOG00000005007	B3GALT5 (ENSGGOG00000004209)	IGSF5 (ENSGGOG00000000146)	PCP4 (ENSGGOG00000008772)	DSCAM (ENSGGOG00000014691)	BACE2 (ENSGGOG00000023241)	FAM3B (ENSGGOG00000015137) ##22	MX2 (ENSGGOG00000001554)	MX1 (ENSGGOG00000001560)	TMPRSS2 (ENSGGOG00000004836)	RIPK4 (ENSGGOG00000015422)	PRDM15 (ENSGGOG00000011345)	C2CD2 (ENSGGOG00000013707)	UMODL1 (ENSGGOG00000008453)	ENSGGOG00000014667	TFF3 (ENSGGOG00000014678)	TFF2 (ENSGGOG00000014685)	TFF1 (ENSGGOG00000014689)	TMPRSS3 (ENSGGOG00000007461)	UBASH3A (ENSGGOG00000012038)	RSPH1 (ENSGGOG00000012051)	SLC37A1 (ENSGGOG00000012067)
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Human	MODERN SPECIES	13	KCNJ15 (ENSG00000157551)	ERG (ENSG00000157554)	ETS2 (ENSG00000157557)	PSMG1 (ENSG00000183527)	BRWD1 (ENSG00000185658)	HMGN1 (ENSG00000205581)	GET1 (ENSG00000182093)	GET1-SH3BGR (ENSG00000285815)	LCA5L (ENSG00000157578)	SH3BGR (ENSG00000185437)	B3GALT5 (ENSG00000183778)	IGSF5 (ENSG00000183067)	PCP4 (ENSG00000183036)	DSCAM (ENSG00000171587)	BACE2 (ENSG00000182240)	FAM3B (ENSG00000183844) ##22	MX2 (ENSG00000183486)	MX1 (ENSG00000157601)	TMPRSS2 (ENSG00000184012)	RIPK4 (ENSG00000183421)	PRDM15 (ENSG00000141956)	C2CD2 (ENSG00000157617)	ZBTB21 (ENSG00000173276)	UMODL1 (ENSG00000177398)	ABCG1 (ENSG00000160179)	TFF3 (ENSG00000160180)	TFF2 (ENSG00000160181)	TFF1 (ENSG00000160182)	TMPRSS3 (ENSG00000160183)	UBASH3A (ENSG00000160185)	RSPH1 (ENSG00000160188)
Pan	ANCESTRAL SPECIES	27	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00860000136018	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841
Chimpanzee	MODERN SPECIES	12	ENSPTRG00000052552	KCNJ15 (ENSPTRG00000043267)	ERG (ENSPTRG00000013907)	ETS2 (ENSPTRG00000013908)	PSMG1 (ENSPTRG00000013911)	BRWD1 (ENSPTRG00000013912)	ENSPTRG00000031426	GET1 (ENSPTRG00000013915)	LCA5L (ENSPTRG00000013916)	SH3BGR (ENSPTRG00000013917)	B3GALT5 (ENSPTRG00000052056)	IGSF5 (ENSPTRG00000013920)	PCP4 (ENSPTRG00000013921)	DSCAM (ENSPTRG00000013922)	BACE2 (ENSPTRG00000013924)	FAM3B (ENSPTRG00000013925) ##22	MX1 (ENSPTRG00000013927)	TMPRSS2 (ENSPTRG00000013928)	RIPK4 (ENSPTRG00000013929)	PRDM15 (ENSPTRG00000013930)	C2CD2 (ENSPTRG00000013932)	ZBTB21 (ENSPTRG00000050158)	UMODL1 (ENSPTRG00000013936)	ABCG1 (ENSPTRG00000013937)	ENSPTRG00000046019	TFF3 (ENSPTRG00000013939)	TFF2 (ENSPTRG00000013940)	TFF1 (ENSPTRG00000013941)	TMPRSS3 (ENSPTRG00000013942)	UBASH3A (ENSPTRG00000013943)	RSPH1 (ENSPTRG00000013944)
Bonobo	MODERN SPECIES	12	ENSPPAG00000037211	ENSPPAG00000033288	KCNJ15 (ENSPPAG00000032085)	ERG (ENSPPAG00000030567)	ETS2 (ENSPPAG00000027688)	PSMG1 (ENSPPAG00000028596)	BRWD1 (ENSPPAG00000029543)	ENSPPAG00000032181	GET1 (ENSPPAG00000034665)	LCA5L (ENSPPAG00000036290)	ENSPPAG00000037065	B3GALT5 (ENSPPAG00000039797)	PCP4 (ENSPPAG00000041210)	DSCAM (ENSPPAG00000017108)	BACE2 (ENSPPAG00000028296)	FAM3B (ENSPPAG00000030408) ##22	MX2 (ENSPPAG00000032451)	MX1 (ENSPPAG00000034486)	ENSPPAG00000000669	TMPRSS2 (ENSPPAG00000018889)	RIPK4 (ENSPPAG00000027031)	ENSPPAG00000030922	C2CD2 (ENSPPAG00000004421)	ZBTB21 (ENSPPAG00000005987)	UMODL1 (ENSPPAG00000011906)	ENSPPAG00000027172	ENSPPAG00000030016	TFF3 (ENSPPAG00000030214)	TFF2 (ENSPPAG00000030237)	TFF1 (ENSPPAG00000030343)	TMPRSS3 (ENSPPAG00000030425)
Orangutan	MODERN SPECIES	12	KCNJ6 (ENSPPYG00000011556)	ENSPPYG00000011415	KCNJ15 (ENSPPYG00000031631)	ERG (ENSPPYG00000011419)	ETS2 (ENSPPYG00000011421)	PSMG1 (ENSPPYG00000011423)	BRWD1 (ENSPPYG00000011424)	ENSPPYG00000011426	GET1 (ENSPPYG00000011427)	LCA5L (ENSPPYG00000032149)	ENSPPYG00000011428	B3GALT5 (ENSPPYG00000011429)	IGSF5 (ENSPPYG00000011430)	DSCAM (ENSPPYG00000011432)	BACE2 (ENSPPYG00000011433)	FAM3B (ENSPPYG00000011435) ##22	MX2 (ENSPPYG00000011436)	MX1 (ENSPPYG00000011437)	TMPRSS2 (ENSPPYG00000011438)	RIPK4 (ENSPPYG00000011440)	PRDM15 (ENSPPYG00000011441)	C2CD2 (ENSPPYG00000011442)	ZBTB21 (ENSPPYG00000011443)	UMODL1 (ENSPPYG00000011445)	ABCG1 (ENSPPYG00000011448)	ENSPPYG00000011449	TFF2 (ENSPPYG00000011450)	TFF1 (ENSPPYG00000011451)	TMPRSS3 (ENSPPYG00000011452)	UBASH3A (ENSPPYG00000011453)	ENSPPYG00000011454
Gibbon	MODERN SPECIES	17	KCNJ15 (ENSNLEG00000033586)	ERG (ENSNLEG00000004758)	ETS2 (ENSNLEG00000004804)	PSMG1 (ENSNLEG00000028150)	BRWD1 (ENSNLEG00000013134)	ENSNLEG00000028365	GET1 (ENSNLEG00000033928)	LCA5L (ENSNLEG00000013153)	ENSNLEG00000013169	B3GALT5 (ENSNLEG00000013171)	IGSF5 (ENSNLEG00000013181)	PCP4 (ENSNLEG00000013201)	ENSNLEG00000032106	DSCAM (ENSNLEG00000028860)	ENSNLEG00000008585	FAM3B (ENSNLEG00000008601) ##22	MX2 (ENSNLEG00000008625)	MX1 (ENSNLEG00000008634)	TMPRSS2 (ENSNLEG00000008677)	RIPK4 (ENSNLEG00000008693)	PRDM15 (ENSNLEG00000014454)	C2CD2 (ENSNLEG00000033883)	ZBTB21 (ENSNLEG00000014479)	UMODL1 (ENSNLEG00000014490)	ABCG1 (ENSNLEG00000028849)	TFF3 (ENSNLEG00000014549)	TFF2 (ENSNLEG00000014551)	TFF1 (ENSNLEG00000014554)	TMPRSS3 (ENSNLEG00000014558)	UBASH3A (ENSNLEG00000014571)	RSPH1 (ENSNLEG00000014607)
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00410000028657	ENSGT00860000136018	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00410000028657	ENSGT00860000136018	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00860000136018	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841
Macaca	ANCESTRAL SPECIES	3	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00860000136018	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841
Pig-tailed macaque	MODERN SPECIES	503	ENSMNEG00000043068	KCNJ15 (ENSMNEG00000012650)	ERG (ENSMNEG00000028447)	ETS2 (ENSMNEG00000029078)	PSMG1 (ENSMNEG00000028968)	BRWD1 (ENSMNEG00000037268)	ENSMNEG00000043143	GET1 (ENSMNEG00000036276)	LCA5L (ENSMNEG00000034779)	SH3BGR (ENSMNEG00000044767)	B3GALT5 (ENSMNEG00000028563)	IGSF5 (ENSMNEG00000036150)	PCP4 (ENSMNEG00000043382)	DSCAM (ENSMNEG00000045567)	BACE2 (ENSMNEG00000039867)	FAM3B (ENSMNEG00000036712) ##22	MX2 (ENSMNEG00000038461)	MX1 (ENSMNEG00000032698)	TMPRSS2 (ENSMNEG00000029183)	RIPK4 (ENSMNEG00000024370)	PRDM15 (ENSMNEG00000041997)	C2CD2 (ENSMNEG00000043656)	ZBTB21 (ENSMNEG00000028147)	UMODL1 (ENSMNEG00000005265)	ENSMNEG00000037122	ABCG1 (ENSMNEG00000030770)	TFF3 (ENSMNEG00000044665)	TFF2 (ENSMNEG00000043148)	TFF1 (ENSMNEG00000040403)	TMPRSS3 (ENSMNEG00000034522)	UBASH3A (ENSMNEG00000030168)
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00940000160662	ENSGT00940000160202	ENSGT00940000163505.a.a.b.b.b.a.b.b.c	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00950000182802.A.a.a.e.a.a.a	ENSGT00390000011549	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Crab-eating macaque	MODERN SPECIES	13	ERG (ENSMFAG00000031991)	ETS2 (ENSMFAG00000055774)	ENSMFAG00000055049	BRWD1 (ENSMFAG00000039942)	ENSMFAG00000056788	ENSMFAG00000002474	LCA5L (ENSMFAG00000008201)	ENSMFAG00000031582	B3GALT5 (ENSMFAG00000000800)	IGSF5 (ENSMFAG00000033889)	ENSMFAG00000052126	PCP4 (ENSMFAG00000002748)	ENSMFAG00000060227	DSCAM (ENSMFAG00000033365)	BACE2 (ENSMFAG00000032329)	FAM3B (ENSMFAG00000033710) ##22	MX2 (ENSMFAG00000046255)	TMPRSS2 (ENSMFAG00000044952)	MX1 (ENSMFAG00000044214)	ENSMFAG00000063892	RIPK4 (ENSMFAG00000044571)	PRDM15 (ENSMFAG00000042871)	C2CD2 (ENSMFAG00000032505)	ZBTB21 (ENSMFAG00000000518)	UMODL1 (ENSMFAG00000039195)	ABCG1 (ENSMFAG00000035347)	TFF3 (ENSMFAG00000045102)	TFF2 (ENSMFAG00000057433)	TFF1 (ENSMFAG00000030916)	TMPRSS3 (ENSMFAG00000003673)	UBASH3A (ENSMFAG00000031488)
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00860000136018	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00910000147022	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a.ub	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00860000136018	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841
Drill	MODERN SPECIES	887	ENSMLEG00000020165	KCNJ15 (ENSMLEG00000027520)	ERG (ENSMLEG00000033749)	ETS2 (ENSMLEG00000024380)	PSMG1 (ENSMLEG00000043473)	BRWD1 (ENSMLEG00000043257)	ENSMLEG00000031999	GET1 (ENSMLEG00000038301)	LCA5L (ENSMLEG00000020734)	SH3BGR (ENSMLEG00000031375)	B3GALT5 (ENSMLEG00000030055)	IGSF5 (ENSMLEG00000006808)	PCP4 (ENSMLEG00000031531)	DSCAM (ENSMLEG00000028425)	BACE2 (ENSMLEG00000044038)	FAM3B (ENSMLEG00000033110) ##22	MX2 (ENSMLEG00000037071)	MX1 (ENSMLEG00000032199)	TMPRSS2 (ENSMLEG00000029709)
Sooty mangabey	MODERN SPECIES	465	KCNJ15 (ENSCATG00000021817)	ERG (ENSCATG00000045169)	ETS2 (ENSCATG00000032809)	PSMG1 (ENSCATG00000042084)	BRWD1 (ENSCATG00000007352)	ENSCATG00000043642	GET1 (ENSCATG00000041953)	LCA5L (ENSCATG00000012924)	SH3BGR (ENSCATG00000040538)	B3GALT5 (ENSCATG00000039495)	IGSF5 (ENSCATG00000041067)	PCP4 (ENSCATG00000043532)	DSCAM (ENSCATG00000016259)	BACE2 (ENSCATG00000042433)	ENSCATG00000032305	FAM3B (ENSCATG00000039352) ##22	MX2 (ENSCATG00000035920)	MX1 (ENSCATG00000036673)	TMPRSS2 (ENSCATG00000035193)	RIPK4 (ENSCATG00000044519)	PRDM15 (ENSCATG00000034002)	C2CD2 (ENSCATG00000041335)	ZBTB21 (ENSCATG00000031344)	UMODL1 (ENSCATG00000042383)	ABCG1 (ENSCATG00000015933)	TFF3 (ENSCATG00000039028)	TFF2 (ENSCATG00000002257)	TFF1 (ENSCATG00000042160)	TMPRSS3 (ENSCATG00000003510)	UBASH3A (ENSCATG00000028990)	RSPH1 (ENSCATG00000037984)
Vervet Monkey	MODERN SPECIES	11	ERG (ENSCSAG00000008463)	ETS2 (ENSCSAG00000008454)	PSMG1 (ENSCSAG00000008450)	BRWD1 (ENSCSAG00000008437)	HMGN1 (ENSCSAG00000008397)	GET1 (ENSCSAG00000008355)	LCA5L (ENSCSAG00000008329)	SH3BGR (ENSCSAG00000008320)	B3GALT5 (ENSCSAG00000018714)	IGSF5 (ENSCSAG00000008315)	PCP4 (ENSCSAG00000008304)	DSCAM (ENSCSAG00000008297)	ENSCSAG00000008272	ENSCSAG00000000280	BACE2 (ENSCSAG00000008267)	FAM3B (ENSCSAG00000008260) ##22	MX2 (ENSCSAG00000008253)	MX1 (ENSCSAG00000008237)	TMPRSS2 (ENSCSAG00000008229)	RIPK4 (ENSCSAG00000008221)	PRDM15 (ENSCSAG00000008213)	C2CD2 (ENSCSAG00000008199)	ZBTB21 (ENSCSAG00000000279)	UMODL1 (ENSCSAG00000008176)	ENSCSAG00000000278	ABCG1 (ENSCSAG00000008143)	TFF3 (ENSCSAG00000008136)	TFF2 (ENSCSAG00000008132)	TFF1 (ENSCSAG00000008127)	TMPRSS3 (ENSCSAG00000008120)	UBASH3A (ENSCSAG00000008109)
Rhinopithecus	ANCESTRAL SPECIES	648														ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b
Golden snub-nosed monkey	MODERN SPECIES	2927														DSCAM (ENSRROG00000034579)	BACE2 (ENSRROG00000042557)	FAM3B (ENSRROG00000010006) ##22	MX2 (ENSRROG00000031481)	MX1 (ENSRROG00000033539)	TMPRSS2 (ENSRROG00000032632)
Black snub-nosed monkey	MODERN SPECIES	638	KRT28 (ENSRBIG00000018840)	KRT27 (ENSRBIG00000041899)	KRT26 (ENSRBIG00000036214)	KRT25 (ENSRBIG00000044480)	KRT24 (ENSRBIG00000044202)	ENSRBIG00000036799	SMARCE1 (ENSRBIG00000040707)	CCR7 (ENSRBIG00000036537)	TNS4 (ENSRBIG00000032169)	IGFBP4 (ENSRBIG00000029579)	TOP2A (ENSRBIG00000027893)	RARA (ENSRBIG00000029995)	CDC6 (ENSRBIG00000042270)	WIPF2 (ENSRBIG00000030934)	BACE2 (ENSRBIG00000024759)	FAM3B (ENSRBIG00000029637) ##22	MX2 (ENSRBIG00000037804)	MX1 (ENSRBIG00000044394)	TMPRSS2 (ENSRBIG00000042071)
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Cebidae	ANCESTRAL SPECIES	32	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a.h	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00390000011636	ENSGT00940000169148	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a.h	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Capuchin	MODERN SPECIES	112														ENSCCAG00000015027	BACE2 (ENSCCAG00000035482)	FAM3B (ENSCCAG00000030600) ##22	MX2 (ENSCCAG00000029612)	ENSCCAG00000020180	MX1 (ENSCCAG00000025192)	TMPRSS2 (ENSCCAG00000030906)	RIPK4 (ENSCCAG00000029896)	PRDM15 (ENSCCAG00000030489)	ENSCCAG00000029556	ZBTB21 (ENSCCAG00000037414)	ENSCCAG00000030168	UMODL1 (ENSCCAG00000028529)	ABCG1 (ENSCCAG00000022414)	TFF3 (ENSCCAG00000022195)	TFF2 (ENSCCAG00000022205)	TFF1 (ENSCCAG00000022303)	TMPRSS3 (ENSCCAG00000038076)
Bolivian squirrel monkey	MODERN SPECIES	66	ENSSBOG00000019633	KCNJ15 (ENSSBOG00000016506)	ERG (ENSSBOG00000026628)	ETS2 (ENSSBOG00000033069)	PSMG1 (ENSSBOG00000027602)	ENSSBOG00000019150	BRWD1 (ENSSBOG00000030561)	ENSSBOG00000032422	GET1 (ENSSBOG00000020756)	LCA5L (ENSSBOG00000028818)	SH3BGR (ENSSBOG00000035842)	IGSF5 (ENSSBOG00000021300)	ENSSBOG00000016785	DSCAM (ENSSBOG00000032237)	BACE2 (ENSSBOG00000025958)	FAM3B (ENSSBOG00000035878) ##22	MX2 (ENSSBOG00000029626)	TMPRSS2 (ENSSBOG00000020098)	RIPK4 (ENSSBOG00000029180)	PRDM15 (ENSSBOG00000013278)	C2CD2 (ENSSBOG00000031814)	UMODL1 (ENSSBOG00000035786)	ABCG1 (ENSSBOG00000021366)	TFF3 (ENSSBOG00000024872)	TFF2 (ENSSBOG00000022921)	TFF1 (ENSSBOG00000032001)	TMPRSS3 (ENSSBOG00000024992)	UBASH3A (ENSSBOG00000030574)	RSPH1 (ENSSBOG00000035861)	SLC37A1 (ENSSBOG00000030217)	PDE9A (ENSSBOG00000027099)
Marmoset	MODERN SPECIES	13	BRWD1 (ENSCJAG00000015042)	ENSCJAG00000045192	ENSCJAG00000038251	LCA5L (ENSCJAG00000005693)	ENSCJAG00000005687	ENSCJAG00000085074	ENSCJAG00000070994	B3GALT5 (ENSCJAG00000005667)	ENSCJAG00000083298	PCP4 (ENSCJAG00000086635)	DSCAM (ENSCJAG00000005540)	ENSCJAG00000083017	ENSCJAG00000084691	ENSCJAG00000083619	BACE2 (ENSCJAG00000011344)	FAM3B (ENSCJAG00000011329) ##22	MX2 (ENSCJAG00000011261)	TMPRSS2 (ENSCJAG00000011236)	ENSCJAG00000085605	RIPK4 (ENSCJAG00000011251)	ENSCJAG00000085735	PRDM15 (ENSCJAG00000013815)	ENSCJAG00000013827	ZBTB21 (ENSCJAG00000064368)	UMODL1 (ENSCJAG00000007292)	ENSCJAG00000082919	ABCG1 (ENSCJAG00000033076)	TFF3 (ENSCJAG00000077292)	TFF2 (ENSCJAG00000007364)	TFF1 (ENSCJAG00000007371)	TMPRSS3 (ENSCJAG00000007372)
Mas night monkey	MODERN SPECIES	1376	KCNJ15 (ENSANAG00000019657)	ERG (ENSANAG00000027714)	ENSANAG00000019801	ETS2 (ENSANAG00000035263)	PSMG1 (ENSANAG00000029982)	BRWD1 (ENSANAG00000027426)	ENSANAG00000037575	GET1 (ENSANAG00000014374)	LCA5L (ENSANAG00000036638)	SH3BGR (ENSANAG00000033495)	IGSF5 (ENSANAG00000023294)	PCP4 (ENSANAG00000022174)	DSCAM (ENSANAG00000029585)	ENSANAG00000034923	BACE2 (ENSANAG00000020891)	FAM3B (ENSANAG00000019755) ##22	MX2 (ENSANAG00000030389)	MX1 (ENSANAG00000032841)	TMPRSS2 (ENSANAG00000031604)	RIPK4 (ENSANAG00000030821)	PRDM15 (ENSANAG00000023230)	C2CD2 (ENSANAG00000021285)	ZBTB21 (ENSANAG00000020407)	UMODL1 (ENSANAG00000030497)	ABCG1 (ENSANAG00000025567)	TFF3 (ENSANAG00000033542)	TFF2 (ENSANAG00000033470)	TFF1 (ENSANAG00000032792)	TMPRSS3 (ENSANAG00000030095)	UBASH3A (ENSANAG00000022507)	RSPH1 (ENSANAG00000035302)
Tarsier	MODERN SPECIES	6002															BACE2 (ENSTSYG00000009166)	FAM3B (ENSTSYG00000004223) ##22
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.a.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Mouse lemur	MODERN SPECIES	24	CSTB (ENSMICG00000031601)	RRP1 (ENSMICG00000004700)	AGPAT3 (ENSMICG00000047320)	TRAPPC10 (ENSMICG00000000992)	PWP2 (ENSMICG00000001002)	GATD3 (ENSMICG00000001007)	ICOSLG (ENSMICG00000001250)	DNMT3L (ENSMICG00000048144)	AIRE (ENSMICG00000034908)	ENSMICG00000046893	PFKL (ENSMICG00000035233)	CFAP410 (ENSMICG00000026921)	TRPM2 (ENSMICG00000012499)	TSPEAR (ENSMICG00000009957)	BACE2 (ENSMICG00000027643)	FAM3B (ENSMICG00000012335) ##22	MX2 (ENSMICG00000012345)	MX1 (ENSMICG00000017322)	TMPRSS2 (ENSMICG00000017325)	TFF3 (ENSMICG00000015162)	ABCG1 (ENSMICG00000015133)	UMODL1 (ENSMICG00000016376)	ZBTB21 (ENSMICG00000042192)	C2CD2 (ENSMICG00000013844)	PRDM15 (ENSMICG00000013783)	RIPK4 (ENSMICG00000038490)	DSCAM (ENSMICG00000042048)	PCP4 (ENSMICG00000015516)	ENSMICG00000028713	B3GALT5 (ENSMICG00000045304)	SH3BGR (ENSMICG00000007755)
Lemuriformes_a	ANCESTRAL SPECIES	60	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.a.a.a.b.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a
Coquerels sifaka	MODERN SPECIES	186	ERG (ENSPCOG00000018128)	ETS2 (ENSPCOG00000003472)	PSMG1 (ENSPCOG00000015910)	ENSPCOG00000009124	ENSPCOG00000018754	ENSPCOG00000017286	GET1 (ENSPCOG00000014862)	ENSPCOG00000026254	SH3BGR (ENSPCOG00000018334)	B3GALT5 (ENSPCOG00000017471)	ENSPCOG00000013389	PCP4 (ENSPCOG00000022744)	DSCAM (ENSPCOG00000017132)	ENSPCOG00000023190	BACE2 (ENSPCOG00000022910)	FAM3B (ENSPCOG00000022148) ##22	MX2 (ENSPCOG00000025353)	MX1 (ENSPCOG00000027202)	TMPRSS2 (ENSPCOG00000020814)	RIPK4 (ENSPCOG00000001750)	PRDM15 (ENSPCOG00000017473)	C2CD2 (ENSPCOG00000026979)
Greater bamboo lemur	MODERN SPECIES	664	ETS2 (ENSPSMG00000022910)	ENSPSMG00000022915	PSMG1 (ENSPSMG00000022930)	BRWD1 (ENSPSMG00000023022)	ENSPSMG00000023069	GET1 (ENSPSMG00000023096)	ENSPSMG00000023100	ENSPSMG00000023105	SH3BGR (ENSPSMG00000023123)	ENSPSMG00000023127	B3GALT5 (ENSPSMG00000023128)	ENSPSMG00000023138	PCP4 (ENSPSMG00000023144)	DSCAM (ENSPSMG00000023178)	BACE2 (ENSPSMG00000023186)	FAM3B (ENSPSMG00000023193) ##22	MX2 (ENSPSMG00000023200)	MX1 (ENSPSMG00000023244)	TMPRSS2 (ENSPSMG00000023280)	RIPK4 (ENSPSMG00000023294)	COMMD6 (ENSPSMG00000023298)	LMO7 (ENSPSMG00000023539)
Bushbaby	MODERN SPECIES	243												PCP4 (ENSOGAG00000008491)	DSCAM (ENSOGAG00000015945)	ENSOGAG00000027351	BACE2 (ENSOGAG00000006848)	FAM3B (ENSOGAG00000006849) ##22	MX2 (ENSOGAG00000006851)	MX1 (ENSOGAG00000009515)	TMPRSS2 (ENSOGAG00000009520)	RIPK4 (ENSOGAG00000015484)	PRDM15 (ENSOGAG00000006444)	C2CD2 (ENSOGAG00000006465)	ZBTB21 (ENSOGAG00000014370)	ENSOGAG00000026493	ENSOGAG00000005904	ABCG1 (ENSOGAG00000012289)	TFF3 (ENSOGAG00000014507)	TFF2 (ENSOGAG00000014510)	TFF1 (ENSOGAG00000032775)	TMPRSS3 (ENSOGAG00000014513)	UBASH3A (ENSOGAG00000015734)
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Tree shrew	MODERN SPECIES	4475														ENSTBEG00000005129	BACE2 (ENSTBEG00000006372)	ENSTBEG00000006984 ##22
Glires	ANCESTRAL SPECIES	2	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Rodentia	ANCESTRAL SPECIES	2	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT01090000259987.a.a.a.d	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Muroidea	ANCESTRAL SPECIES	11	ENSGT00940000155587.a.b	ENSGT00940000159245	ENSGT00940000157240	ENSGT00940000160841	ENSGT00940000158589	ENSGT00940000162623	ENSGT00940000161334	ENSGT00940000162416	ENSGT00940000160131	ENSGT00940000159975	ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Muroidea_A	ANCESTRAL SPECIES	17										ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Cricetidae	ANCESTRAL SPECIES	16										ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Cricetinae	ANCESTRAL SPECIES	10									ENSGT00940000153805.q.b.a.a.a.a.a.a.a.a.c.a.a	ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662	ENSGT00990000203615.b.a.a.a.b
Golden Hamster	MODERN SPECIES	659						ENSMAUG00000011099	ENSMAUG00000013074	ENSMAUG00000014178	ENSMAUG00000014891	ENSMAUG00000011188	C2cd2 (ENSMAUG00000013544)	Prdm15 (ENSMAUG00000013730)	Ripk4 (ENSMAUG00000017222)	Tmprss2 (ENSMAUG00000018948)	Mx2 (ENSMAUG00000016913)	Fam3b (ENSMAUG00000018355) ##22	Mx1 (ENSMAUG00000000088)	Bace2 (ENSMAUG00000018970)	Dscam (ENSMAUG00000002565)	ENSMAUG00000001783	Igsf5 (ENSMAUG00000018757)	ENSMAUG00000001722	Lca5l (ENSMAUG00000001467)	ENSMAUG00000008620	Hmgn1 (ENSMAUG00000009433)	ENSMAUG00000005957	ENSMAUG00000004019	Psmg1 (ENSMAUG00000014265)	Ets2 (ENSMAUG00000012072)	Erg (ENSMAUG00000012151)	Kcnj15 (ENSMAUG00000009656)
Chinese hamster chok1gshd	MODERN SPECIES	382								ENSCGRG00001016488	Zbtb21 (ENSCGRG00001012061)	C2cd2 (ENSCGRG00001018582)	Prdm15 (ENSCGRG00001012883)	Ripk4 (ENSCGRG00001021625)	ENSCGRG00001011892	Tmprss2 (ENSCGRG00001008718)	Mx2 (ENSCGRG00001004304)	Fam3b (ENSCGRG00001021679) ##22	Mx1 (ENSCGRG00001009938)	Bace2 (ENSCGRG00001006826)	Dscam (ENSCGRG00001020907)	ENSCGRG00001011223	Igsf5 (ENSCGRG00001017358)	B3galt5 (ENSCGRG00001003465)	ENSCGRG00001018634	Lca5l (ENSCGRG00001001508)	ENSCGRG00001008454	ENSCGRG00001015026	Hmgn1 (ENSCGRG00001006425)	Brwd1 (ENSCGRG00001019901)	Psmg1 (ENSCGRG00001023463)	Ets2 (ENSCGRG00001019241)	Erg (ENSCGRG00001005751)
Cricetidae_B	ANCESTRAL SPECIES	13										ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Prairie vole	MODERN SPECIES	155										ENSMOCG00000000330	C2cd2 (ENSMOCG00000007215)	Prdm15 (ENSMOCG00000019515)	Ripk4 (ENSMOCG00000004535)	Tmprss2 (ENSMOCG00000009120)	Mx2 (ENSMOCG00000015763)	Fam3b (ENSMOCG00000001358) ##22	Mx1 (ENSMOCG00000015113)	Bace2 (ENSMOCG00000018255)	Dscam (ENSMOCG00000000769)	ENSMOCG00000016357	Itgb2l (ENSMOCG00000000046)	Igsf5 (ENSMOCG00000013940)
Northern American deer mouse	MODERN SPECIES	3	ENSPEMG00000029598	ENSPEMG00000018395	Cbr3 (ENSPEMG00000018622)	Dop1b (ENSPEMG00000007073)	Morc3 (ENSPEMG00000011221)	ENSPEMG00000030407	Zbtb21 (ENSPEMG00000025526)	C2cd2 (ENSPEMG00000014730)	Prdm15 (ENSPEMG00000011962)	Ripk4 (ENSPEMG00000016616)	Tmprss2 (ENSPEMG00000007177)	ENSPEMG00000027256	ENSPEMG00000024660	ENSPEMG00000027181	ENSPEMG00000014739	Fam3b (ENSPEMG00000017357) ##22	ENSPEMG00000015989	Bace2 (ENSPEMG00000015582)	Dscam (ENSPEMG00000013979)	ENSPEMG00000029164	Itgb2l (ENSPEMG00000009654)	Igsf5 (ENSPEMG00000007617)	B3galt5 (ENSPEMG00000006922)	ENSPEMG00000003252	Lca5l (ENSPEMG00000020214)	ENSPEMG00000027492	ENSPEMG00000020156	Brwd1 (ENSPEMG00000014898)	Psmg1 (ENSPEMG00000010416)	ENSPEMG00000031015	Ets2 (ENSPEMG00000012273)
Murinae	ANCESTRAL SPECIES	13										ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Mus	ANCESTRAL SPECIES	13										ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Mus_A	ANCESTRAL SPECIES	18										ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A.u.b	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Mus_B	ANCESTRAL SPECIES	18										ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A.u.a	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Mouse	MODERN SPECIES	7								A630089N07Rik (ENSMUSG00000116673)	B230307C23Rik (ENSMUSG00000080717)	Zbtb21 (ENSMUSG00000046962)	C2cd2 (ENSMUSG00000045975)	Prdm15 (ENSMUSG00000014039)	Ripk4 (ENSMUSG00000005251)	Tmprss2 (ENSMUSG00000000385)	Mx2 (ENSMUSG00000023341)	Fam3b (ENSMUSG00000022938) ##22	Mx1 (ENSMUSG00000000386)	Bace2 (ENSMUSG00000040605)	Dscam (ENSMUSG00000050272)	Pcp4 (ENSMUSG00000090223)	Itgb2l (ENSMUSG00000000157)	Gm49948 (ENSMUSG00000117081)	Igsf5 (ENSMUSG00000000159)	B3galt5 (ENSMUSG00000074892)	Sh3bgr (ENSMUSG00000040666)	Lca5l (ENSMUSG00000045275)	Get1 (ENSMUSG00000023147)	Hmgn1 (ENSMUSG00000040681)	Brwd1 (ENSMUSG00000022914)	Psmg1 (ENSMUSG00000022913)	Ets2 (ENSMUSG00000022895)
Mus_C	ANCESTRAL SPECIES	12										ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00940000155686.i	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.j	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT01090000259987.a.a.a.d	ENSGT00940000163238	ENSGT00940000160964	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A.u.a	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
spretus	MODERN SPECIES	7											Zbtb21 (MGP_SPRETEiJ_G0021921)	C2cd2 (MGP_SPRETEiJ_G0021920)	Prdm15 (MGP_SPRETEiJ_G0021919)	Ripk4 (MGP_SPRETEiJ_G0021918)	Tmprss2 (MGP_SPRETEiJ_G0021917)	Fam3b (MGP_SPRETEiJ_G0021916) ##22	MGP_SPRETEiJ_G0021915	Bace2 (MGP_SPRETEiJ_G0021914)	Dscam (MGP_SPRETEiJ_G0021913)	MGP_SPRETEiJ_G0021912	Itgb2l (MGP_SPRETEiJ_G0021911)	Igsf5 (MGP_SPRETEiJ_G0021910)	B3galt5 (MGP_SPRETEiJ_G0021909)	MGP_SPRETEiJ_G0021908	Lca5l (MGP_SPRETEiJ_G0021907)	MGP_SPRETEiJ_G0021906	Hmgn1 (MGP_SPRETEiJ_G0021905)	Psmg1 (MGP_SPRETEiJ_G0021903)	Ets2 (MGP_SPRETEiJ_G0021902)	Erg (MGP_SPRETEiJ_G0021901)	Kcnj15 (MGP_SPRETEiJ_G0021900)
Steppe mouse	MODERN SPECIES	2600										ENSMSIG00000020680	ENSMSIG00000020580	Prdm15 (ENSMSIG00000020473)	Ripk4 (ENSMSIG00000020456)	ENSMSIG00000020427	ENSMSIG00000020383	Fam3b (ENSMSIG00000020247) ##22	ENSMSIG00000020084	Bace2 (ENSMSIG00000020064)
Ryukyu mouse	MODERN SPECIES	7											Zbtb21 (MGP_CAROLIEiJ_G0021014)	C2cd2 (MGP_CAROLIEiJ_G0021013)	Prdm15 (MGP_CAROLIEiJ_G0021012)	Ripk4 (MGP_CAROLIEiJ_G0021011)	MGP_CAROLIEiJ_G0008949	Fam3b (MGP_CAROLIEiJ_G0021010) ##22	MGP_CAROLIEiJ_G0021009	Bace2 (MGP_CAROLIEiJ_G0021008)	Dscam (MGP_CAROLIEiJ_G0021007)	MGP_CAROLIEiJ_G0021006	Itgb2l (MGP_CAROLIEiJ_G0021005)	Igsf5 (MGP_CAROLIEiJ_G0021004)	B3galt5 (MGP_CAROLIEiJ_G0021003)	MGP_CAROLIEiJ_G0021002	Lca5l (MGP_CAROLIEiJ_G0021001)	MGP_CAROLIEiJ_G0021000	MGP_CAROLIEiJ_G0020999	Brwd1 (MGP_CAROLIEiJ_G0020998)	Psmg1 (MGP_CAROLIEiJ_G0020997)	Ets2 (MGP_CAROLIEiJ_G0020996)	Erg (MGP_CAROLIEiJ_G0020995)
Shrew mouse	MODERN SPECIES	3										Zbtb21 (MGP_PahariEiJ_G0016720)	C2cd2 (MGP_PahariEiJ_G0016719)	Prdm15 (MGP_PahariEiJ_G0016718)	Ripk4 (MGP_PahariEiJ_G0016717)	Tmprss2 (MGP_PahariEiJ_G0016716)	MGP_PahariEiJ_G0008412	Fam3b (MGP_PahariEiJ_G0016715) ##22	MGP_PahariEiJ_G0016714	Bace2 (MGP_PahariEiJ_G0016713)	Dscam (MGP_PahariEiJ_G0016712)	MGP_PahariEiJ_G0016711	Itgb2l (MGP_PahariEiJ_G0016710)	Igsf5 (MGP_PahariEiJ_G0016709)	B3galt5 (MGP_PahariEiJ_G0016708)	MGP_PahariEiJ_G0016707	Lca5l (MGP_PahariEiJ_G0016706)	MGP_PahariEiJ_G0016705	MGP_PahariEiJ_G0016704	MGP_PahariEiJ_G0016703	Psmg1 (MGP_PahariEiJ_G0016702)	Ets2 (MGP_PahariEiJ_G0016701)	Erg (MGP_PahariEiJ_G0016700)
Rat	MODERN SPECIES	2	Or5ac24 (ENSRNOG00000064234)	Or5ac25 (ENSRNOG00000066783)	Gabrr3 (ENSRNOG00000001679)	Riox2 (ENSRNOG00000001680)	Crybg3 (ENSRNOG00000045728)	Arl6 (ENSRNOG00000001689)	Epha6 (ENSRNOG00000029184)	RGD1565472 (ENSRNOG00000046991)	Nsun3 (ENSRNOG00000070121)	Zbtb21 (ENSRNOG00000001623)	C2cd2 (ENSRNOG00000001621)	Prdm15 (ENSRNOG00000001620)	Ripk4 (ENSRNOG00000001618)	Tmprss2 (ENSRNOG00000001976)	Mx2 (ENSRNOG00000001963)	Fam3b (ENSRNOG00000001962) ##22	Mx1 (ENSRNOG00000001959)	Bace2 (ENSRNOG00000001953)	Dscam (ENSRNOG00000027992)	Pcp4 (ENSRNOG00000001628)	ENSRNOG00000063024	Igsf5 (ENSRNOG00000028216)	B3galt5 (ENSRNOG00000030983)	Sh3bgr (ENSRNOG00000028238)	Lca5l (ENSRNOG00000028248)	Get1 (ENSRNOG00000001629)	Hmgn1 (ENSRNOG00000048226)	ENSRNOG00000067977	Brwd1 (ENSRNOG00000001632)	Psmg1 (ENSRNOG00000001643)	Ets2 (ENSRNOG00000001647)
Lesser Egyptian jerboa	MODERN SPECIES	54	Kcnj15 (ENSJJAG00000016880)	Erg (ENSJJAG00000024273)	Ets2 (ENSJJAG00000000366)	Psmg1 (ENSJJAG00000000631)	ENSJJAG00000014608	ENSJJAG00000010871	ENSJJAG00000013400	ENSJJAG00000014499	Lca5l (ENSJJAG00000017192)	ENSJJAG00000018659	Igsf5 (ENSJJAG00000000540)	ENSJJAG00000013366	Dscam (ENSJJAG00000010430)	Bace2 (ENSJJAG00000006557)	ENSJJAG00000012773	ENSJJAG00000023642 ##22	ENSJJAG00000023808	Tmprss2 (ENSJJAG00000021090)	Ripk4 (ENSJJAG00000023752)	Prdm15 (ENSJJAG00000016457)	C2cd2 (ENSJJAG00000016581)	Zbtb21 (ENSJJAG00000002063)	Umodl1 (ENSJJAG00000012073)	Abcg1 (ENSJJAG00000011288)	Tff3 (ENSJJAG00000014849)	Tff2 (ENSJJAG00000022987)	Tff1 (ENSJJAG00000020776)	Tmprss3 (ENSJJAG00000017683)	Ubash3a (ENSJJAG00000018947)	Rsph1 (ENSJJAG00000023687)	Slc37a1 (ENSJJAG00000009176)
Kangaroo rat	MODERN SPECIES	422	Psmg1 (ENSDORG00000024369)	ENSDORG00000028290	ENSDORG00000023919	Hmgn1 (ENSDORG00000024516)	ENSDORG00000023446	Lca5l (ENSDORG00000016061)	ENSDORG00000010100	B3galt5 (ENSDORG00000027270)	Igsf5 (ENSDORG00000005042)	ENSDORG00000007355	ENSDORG00000025922	Dscam (ENSDORG00000002348)	ENSDORG00000030205	Bace2 (ENSDORG00000010948)	ENSDORG00000027605	Fam3b (ENSDORG00000011095) ##22	ENSDORG00000003337	Tmprss2 (ENSDORG00000003340)	Ripk4 (ENSDORG00000008414)	Prdm15 (ENSDORG00000009748)	C2cd2 (ENSDORG00000000978)	ENSDORG00000028102	Zbtb21 (ENSDORG00000000981)	Umodl1 (ENSDORG00000001772)	Abcg1 (ENSDORG00000025745)	Tff3 (ENSDORG00000029966)	Tff2 (ENSDORG00000003845)	Tff1 (ENSDORG00000009227)	Tmprss3 (ENSDORG00000009229)	ENSDORG00000024014	Rsph1 (ENSDORG00000005155)
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Hystricomorpha	ANCESTRAL SPECIES	60	ENSGT00390000011821.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a	ENSGT00940000161590	ENSGT00940000162228	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.n.b	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00390000011821.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a	ENSGT00940000161590	ENSGT00940000162228	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.n.b	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00390000011821.b	ENSGT00950000182836.b.b.b.a	ENSGT00390000003873	ENSGT00550000074981	ENSGT00390000003706.a.a	ENSGT00940000161590	ENSGT00940000162228	ENSGT00940000161104	ENSGT00940000159292	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000154360.A.b	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.n.b	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Long-tailed chinchilla	MODERN SPECIES	114	PDXK (ENSCLAG00000004982)	CSTB (ENSCLAG00000009970)	RRP1 (ENSCLAG00000011639)	AGPAT3 (ENSCLAG00000005641)	TRAPPC10 (ENSCLAG00000004935)	PWP2 (ENSCLAG00000009503)	GATD3 (ENSCLAG00000006863)	ICOSLG (ENSCLAG00000004572)	DNMT3L (ENSCLAG00000008128)	AIRE (ENSCLAG00000004699)	PFKL (ENSCLAG00000006907)	CFAP410 (ENSCLAG00000005977)	TRPM2 (ENSCLAG00000007001)	LRRC3 (ENSCLAG00000006488)	TMPRSS2 (ENSCLAG00000006480)	FAM3B (ENSCLAG00000005832) ##22	ENSCLAG00000006920	BACE2 (ENSCLAG00000006208)	DSCAM (ENSCLAG00000016317)	PCP4 (ENSCLAG00000012532)	RIPK4 (ENSCLAG00000007447)	PRDM15 (ENSCLAG00000005430)	C2CD2 (ENSCLAG00000007896)	ZBTB21 (ENSCLAG00000006530)	UMODL1 (ENSCLAG00000009892)	ABCG1 (ENSCLAG00000013116)	TFF3 (ENSCLAG00000013670)	TFF2 (ENSCLAG00000014359)	TMPRSS3 (ENSCLAG00000006858)	UBASH3A (ENSCLAG00000005633)	RSPH1 (ENSCLAG00000005001)
Degu	MODERN SPECIES	86	ENSODEG00000013838	ENSODEG00000014012	ENSODEG00000013439	TSPEAR (ENSODEG00000013818)	PDXK (ENSODEG00000013386)	AGPAT3 (ENSODEG00000012787)	ENSODEG00000013648	PWP2 (ENSODEG00000013073)	ENSODEG00000013954	PFKL (ENSODEG00000014418)	CFAP410 (ENSODEG00000012840)	TRPM2 (ENSODEG00000013043)	LRRC3 (ENSODEG00000020091)	DSCAM (ENSODEG00000012858)	BACE2 (ENSODEG00000013570)	ENSODEG00000014232 ##22	ENSODEG00000013917	TMPRSS2 (ENSODEG00000013358)	RIPK4 (ENSODEG00000013779)	PRDM15 (ENSODEG00000013112)	C2CD2 (ENSODEG00000014616)	ZBTB21 (ENSODEG00000014325)	UMODL1 (ENSODEG00000012627)	ABCG1 (ENSODEG00000012323)	TFF3 (ENSODEG00000013636)	TFF2 (ENSODEG00000012650)	ENSODEG00000014901	TMPRSS3 (ENSODEG00000013031)	UBASH3A (ENSODEG00000013424)	RSPH1 (ENSODEG00000012910)	SLC37A1 (ENSODEG00000013553)
Guinea pig	MODERN SPECIES	90	PDE9A (ENSCPOG00000014197)	SLC37A1 (ENSCPOG00000011616)	RSPH1 (ENSCPOG00000002266)	UBASH3A (ENSCPOG00000013429)	TMPRSS3 (ENSCPOG00000012057)	TFF2 (ENSCPOG00000012065)	ENSCPOG00000006226	ABCG1 (ENSCPOG00000015194)	UMODL1 (ENSCPOG00000023566)	ZBTB21 (ENSCPOG00000019792)	C2CD2 (ENSCPOG00000002808)	PRDM15 (ENSCPOG00000023446)	RIPK4 (ENSCPOG00000022900)	ENSCPOG00000007052	ENSCPOG00000021489	ENSCPOG00000013108 ##22	ENSCPOG00000025373	BACE2 (ENSCPOG00000007403)	DSCAM (ENSCPOG00000005367)	PCP4 (ENSCPOG00000039173)	LRRC3 (ENSCPOG00000030436)	TRPM2 (ENSCPOG00000023512)	CFAP410 (ENSCPOG00000009611)	PFKL (ENSCPOG00000019438)	AIRE (ENSCPOG00000019868)	DNMT3L (ENSCPOG00000004070)	GATD3 (ENSCPOG00000011419)	PWP2 (ENSCPOG00000023616)	TRAPPC10 (ENSCPOG00000011117)	AGPAT3 (ENSCPOG00000032718)	RRP1 (ENSCPOG00000038986)
Naked mole-rat female	MODERN SPECIES	11	UBASH3A (ENSHGLG00000036614)	TMPRSS3 (ENSHGLG00000007911)	ENSHGLG00000050421	TFF2 (ENSHGLG00000006500)	TFF3 (ENSHGLG00000007574)	ENSHGLG00000040957	ENSHGLG00000035485	ENSHGLG00000009228	ENSHGLG00000015409	ZBTB21 (ENSHGLG00000017068)	C2CD2 (ENSHGLG00000016958)	PRDM15 (ENSHGLG00000016972)	RIPK4 (ENSHGLG00000011078)	ENSHGLG00000018181	ENSHGLG00000017431	ENSHGLG00000005110 ##22	ENSHGLG00000041834	ENSHGLG00000006993	ENSHGLG00000008616	ENSHGLG00000005193	PCP4 (ENSHGLG00000043480)	ENSHGLG00000042683	TRPM2 (ENSHGLG00000018785)	ENSHGLG00000016027	PFKL (ENSHGLG00000017234)	AIRE (ENSHGLG00000016716)	ENSHGLG00000009448	ENSHGLG00000013877	ENSHGLG00000018104	PWP2 (ENSHGLG00000017401)	TRAPPC10 (ENSHGLG00000013176)
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00960000188749	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b
Marmotini_b	ANCESTRAL SPECIES	30	ENSGT00390000012174	ENSGT00940000155587.a.b	ENSGT00940000159245	ENSGT00940000157240	ENSGT00940000160841	ENSGT00940000158589	ENSGT00960000188749	ENSGT00940000162416	ENSGT00940000160131	ENSGT00940000159975	ENSGT00940000161028	ENSGT00530000063764.a	ENSGT00940000157890	ENSGT00940000159908	ENSGT00940000155207.a.b	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000159548	ENSGT00940000154678.a.a	ENSGT00530000064267	ENSGT00940000163238	ENSGT00940000160964	ENSGT00950000182901.a.a.a.b.b	ENSGT00940000159847	ENSGT00560000077266.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00950000182802.A	ENSGT00950000183107.a.b.a	ENSGT00500000044950	ENSGT00940000160202	ENSGT00940000160662
Arctic ground squirrel	MODERN SPECIES	1113																FAM3B (ENSUPAG00010001131) ##22
Squirrel	MODERN SPECIES	100	NDUFV3 (ENSSTOG00000000445)	WDR4 (ENSSTOG00000000442)	PDE9A (ENSSTOG00000001452)	SLC37A1 (ENSSTOG00000025445)	RSPH1 (ENSSTOG00000002331)	ENSSTOG00000000600	TMPRSS3 (ENSSTOG00000024702)	TFF3 (ENSSTOG00000000593)	ABCG1 (ENSSTOG00000027580)	UMODL1 (ENSSTOG00000027158)	ZBTB21 (ENSSTOG00000010003)	C2CD2 (ENSSTOG00000015690)	PRDM15 (ENSSTOG00000000262)	RIPK4 (ENSSTOG00000020499)	TMPRSS2 (ENSSTOG00000012868)	FAM3B (ENSSTOG00000006382) ##22	MX1 (ENSSTOG00000012846)	BACE2 (ENSSTOG00000011669)	DSCAM (ENSSTOG00000004849)	PCP4 (ENSSTOG00000033674)	ENSSTOG00000002986	B3GALT5 (ENSSTOG00000012749)	SH3BGR (ENSSTOG00000020100)	GET1 (ENSSTOG00000012736)	HMGN1 (ENSSTOG00000030815)	BRWD1 (ENSSTOG00000027149)	PSMG1 (ENSSTOG00000007084)	ETS2 (ENSSTOG00000024655)	ERG (ENSSTOG00000025814)	KCNJ15 (ENSSTOG00000000052)	KCNJ6 (ENSSTOG00000016154)
Alpin marmot	MODERN SPECIES	4	SLC37A1 (ENSMMMG00000010809)	RSPH1 (ENSMMMG00000010607)	UBASH3A (ENSMMMG00000010550)	TMPRSS3 (ENSMMMG00000010515)	ENSMMMG00000010506	ENSMMMG00000010491	TFF3 (ENSMMMG00000010483)	ABCG1 (ENSMMMG00000010456)	UMODL1 (ENSMMMG00000010282)	ENSMMMG00000010266	C2CD2 (ENSMMMG00000010233)	PRDM15 (ENSMMMG00000010191)	RIPK4 (ENSMMMG00000010156)	TMPRSS2 (ENSMMMG00000010132)	MX1 (ENSMMMG00000004765)	FAM3B (ENSMMMG00000004645) ##22	BACE2 (ENSMMMG00000004641)	DSCAM (ENSMMMG00000004573)	PCP4 (ENSMMMG00000004533)	ENSMMMG00000004498	B3GALT5 (ENSMMMG00000004484)	ENSMMMG00000004462	SH3BGR (ENSMMMG00000004305)	LCA5L (ENSMMMG00000004259)	GET1 (ENSMMMG00000004202)	HMGN1 (ENSMMMG00000004197)	BRWD1 (ENSMMMG00000004116)	ENSMMMG00000004110	PSMG1 (ENSMMMG00000004106)	ETS2 (ENSMMMG00000004068)	ERG (ENSMMMG00000003632)
Eurasian red squirrel	MODERN SPECIES	1	RSPH1 (ENSSVLG00005013160)	UBASH3A (ENSSVLG00005013444)	TMPRSS3 (ENSSVLG00005013778)	ENSSVLG00005014123	TFF2 (ENSSVLG00005014174)	ENSSVLG00005014242	ENSSVLG00005014286	ABCG1 (ENSSVLG00005014331)	UMODL1 (ENSSVLG00005014644)	ZBTB21 (ENSSVLG00005015081)	C2CD2 (ENSSVLG00005015130)	PRDM15 (ENSSVLG00005015213)	RIPK4 (ENSSVLG00005015741)	TMPRSS2 (ENSSVLG00005015845)	ENSSVLG00005015978	FAM3B (ENSSVLG00005016099) ##22	ENSSVLG00005016342	BACE2 (ENSSVLG00005017213)	DSCAM (ENSSVLG00005017352)	PCP4 (ENSSVLG00005018045)	ENSSVLG00005018094	B3GALT5 (ENSSVLG00005018186)	SH3BGR (ENSSVLG00005018209)	LCA5L (ENSSVLG00005018302)	GET1 (ENSSVLG00005018408)	ENSSVLG00005018529	ENSSVLG00005018655	ENSSVLG00005018680	PSMG1 (ENSSVLG00005018720)	ETS2 (ENSSVLG00005018858)	ERG (ENSSVLG00005018996)
Lagomorpha	ANCESTRAL SPECIES	393														ENSGT00940000155207.a.b	ENSGT00940000155686	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266
Pika	MODERN SPECIES	3951																ENSOPRG00000015955 ##22
Rabbit	MODERN SPECIES	780														TMPRSS2 (ENSOCUG00000024741)	ENSOCUG00000021924	ENSOCUG00000023923 ##22	ENSOCUG00000021037
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00390000011549	ENSGT00950000182802.A	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b	ENSGT00940000164489	ENSGT00390000011549	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Carnivora	ANCESTRAL SPECIES	10	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163845	ENSGT00940000163441.f.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334
Caniformia	ANCESTRAL SPECIES		ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163845	ENSGT00940000163441.f.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890.c	ENSGT00940000157890.d	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416
Caniformia_b	ANCESTRAL SPECIES		ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163845	ENSGT00940000159908	ENSGT00940000157890.c	ENSGT00940000157890.d	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
Ursidae	ANCESTRAL SPECIES	1	ENSGT00950000185378	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163845.i	ENSGT00940000159908	ENSGT00940000157890.c	ENSGT00940000157890.d	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
Ursus	ANCESTRAL SPECIES	94																ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163845.i	ENSGT00940000159908	ENSGT00940000157890.c	ENSGT00940000157890.d	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
American black bear	MODERN SPECIES	3557																FAM3B (ENSUAMG00000026743) ##22	MX2 (ENSUAMG00000026737)	MX1 (ENSUAMG00000026734)	TMPRSS2 (ENSUAMG00000026733)
Polar bear	MODERN SPECIES	394																ENSUMAG00000025634 ##22	MX2 (ENSUMAG00000025633)	MX1 (ENSUMAG00000025632)	TMPRSS2 (ENSUMAG00000025631)	ENSUMAG00000025630	RIPK4 (ENSUMAG00000025629)	ENSUMAG00000025628	ENSUMAG00000025627	C2CD2 (ENSUMAG00000025626)	ZBTB21 (ENSUMAG00000025623)	UMODL1 (ENSUMAG00000025621)	ABCG1 (ENSUMAG00000025548)	TFF3 (ENSUMAG00000025547)	TFF2 (ENSUMAG00000025546)	TFF1 (ENSUMAG00000025545)	TMPRSS3 (ENSUMAG00000025544)
Giant Panda	MODERN SPECIES		KCNJ6 (ENSAMEG00000018222)	ENSAMEG00000029134	KCNJ15 (ENSAMEG00000005431)	ERG (ENSAMEG00000016610)	ETS2 (ENSAMEG00000016631)	PSMG1 (ENSAMEG00000014078)	BRWD1 (ENSAMEG00000014080)	HMGN1 (ENSAMEG00000014100)	GET1 (ENSAMEG00000014104)	LCA5L (ENSAMEG00000014108)	SH3BGR (ENSAMEG00000028047)	B3GALT5 (ENSAMEG00000019434)	ENSAMEG00000006410	DSCAM (ENSAMEG00000005759)	BACE2 (ENSAMEG00000005103)	FAM3B (ENSAMEG00000005115) ##22	MX1 (ENSAMEG00000010494)	TMPRSS2 (ENSAMEG00000010563)	ENSAMEG00000024617	ENSAMEG00000031524	RIPK4 (ENSAMEG00000002205)	PRDM15 (ENSAMEG00000002162)	C2CD2 (ENSAMEG00000002123)	ZBTB21 (ENSAMEG00000028624)	UMODL1 (ENSAMEG00000002089)	ABCG1 (ENSAMEG00000002038)	TFF3 (ENSAMEG00000025151)	ENSAMEG00000025924	ENSAMEG00000002024	ENSAMEG00000002023	TMPRSS3 (ENSAMEG00000001989)
Mustelinae	ANCESTRAL SPECIES	67	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890.c	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Ferret	MODERN SPECIES	248	ENSMPUG00000008483	ENSMPUG00000008489	ETS2 (ENSMPUG00000008494)	PSMG1 (ENSMPUG00000008503)	BRWD1 (ENSMPUG00000008515)	HMGN1 (ENSMPUG00000008550)	GET1 (ENSMPUG00000008557)	LCA5L (ENSMPUG00000008561)	SH3BGR (ENSMPUG00000008609)	B3GALT5 (ENSMPUG00000008621)	ENSMPUG00000008652	PCP4 (ENSMPUG00000008663)	ENSMPUG00000008669	ENSMPUG00000008687	BACE2 (ENSMPUG00000008693)	FAM3B (ENSMPUG00000008701) ##22	MX2 (ENSMPUG00000008716)	MX1 (ENSMPUG00000008778)	TMPRSS2 (ENSMPUG00000008804)	ENSMPUG00000008922	RIPK4 (ENSMPUG00000008928)	PRDM15 (ENSMPUG00000008938)	C2CD2 (ENSMPUG00000008960)	ZBTB21 (ENSMPUG00000009040)	UMODL1 (ENSMPUG00000009050)	ENSMPUG00000009133	ABCG1 (ENSMPUG00000009157)	TFF3 (ENSMPUG00000009174)	TFF2 (ENSMPUG00000009192)	ENSMPUG00000009203	TMPRSS3 (ENSMPUG00000009212)
American mink	MODERN SPECIES	122														DSCAM (ENSNVIG00000004782)	BACE2 (ENSNVIG00000004884)	FAM3B (ENSNVIG00000004941) ##22	MX2 (ENSNVIG00000004991)	MX1 (ENSNVIG00000005239)	TMPRSS2 (ENSNVIG00000005330)	RIPK4 (ENSNVIG00000005386)	PRDM15 (ENSNVIG00000005389)	C2CD2 (ENSNVIG00000005456)	UMODL1 (ENSNVIG00000005508)	ABCG1 (ENSNVIG00000005652)	TFF3 (ENSNVIG00000005732)	TFF2 (ENSNVIG00000005743)	TFF1 (ENSNVIG00000005753)	TMPRSS3 (ENSNVIG00000005758)	UBASH3A (ENSNVIG00000005820)	RSPH1 (ENSNVIG00000005890)	SLC37A1 (ENSNVIG00000005945)
Canidae	ANCESTRAL SPECIES	39	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000016972.b	ENSGT00950000182802.A.ab.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.a.b.b	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890.c	ENSGT00940000157890.d	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000016972.b	ENSGT00950000182802.A.ab.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000155183.a.a	ENSGT01100000263929	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890.c	ENSGT00940000157890.d	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334
Dingo	MODERN SPECIES	63																FAM3B (ENSCAFG00020016531) ##22	MX2 (ENSCAFG00020016534)	MX1 (ENSCAFG00020016550)	TMPRSS2 (ENSCAFG00020016552)	ENSCAFG00020016554	ENSCAFG00020016563	ENSCAFG00020016567	RIPK4 (ENSCAFG00020016569)	ENSCAFG00020016573	ENSCAFG00020016578	C2CD2 (ENSCAFG00020016591)	ENSCAFG00020016594	UMODL1 (ENSCAFG00020016599)	ABCG1 (ENSCAFG00020016625)	TFF3 (ENSCAFG00020018411)	ENSCAFG00020018415
Dog	MODERN SPECIES	24	KCNJ15 (ENSCAFG00845028983)	ERG (ENSCAFG00845029042)	ETS2 (ENSCAFG00845029168)	ENSCAFG00845029206	BRWD1 (ENSCAFG00845029268)	ENSCAFG00845029559	HMGN1 (ENSCAFG00845029582)	GET1 (ENSCAFG00845029628)	LCA5L (ENSCAFG00845029679)	SH3BGR (ENSCAFG00845029733)	B3GALT5 (ENSCAFG00845029783)	IGSF5 (ENSCAFG00845029797)	PCP4 (ENSCAFG00845029822)	DSCAM (ENSCAFG00845029877)	BACE2 (ENSCAFG00845030032)	FAM3B (ENSCAFG00845030073) ##22	MX1 (ENSCAFG00845030104)	TMPRSS2 (ENSCAFG00845030150)	ENSCAFG00845030190	ENSCAFG00845030203	ENSCAFG00845030213	RIPK4 (ENSCAFG00845030222)	PRDM15 (ENSCAFG00845030258)	C2CD2 (ENSCAFG00845030326)	ZBTB21 (ENSCAFG00845030348)	UMODL1 (ENSCAFG00845030370)	ABCG1 (ENSCAFG00845030427)	TFF3 (ENSCAFG00845030487)	TFF2 (ENSCAFG00845030490)	TFF1 (ENSCAFG00845030496)	TMPRSS3 (ENSCAFG00845030504)
Red fox	MODERN SPECIES	181											ENSVVUG00000016315	IGSF5 (ENSVVUG00000016321)	PCP4 (ENSVVUG00000016329)	DSCAM (ENSVVUG00000016345)	BACE2 (ENSVVUG00000016424)	FAM3B (ENSVVUG00000016454) ##22	ENSVVUG00000016470	ENSVVUG00000016483	ENSVVUG00000016487	TMPRSS2 (ENSVVUG00000016490)	ENSVVUG00000016502	ENSVVUG00000016503	ENSVVUG00000016507	RIPK4 (ENSVVUG00000016514)	PRDM15 (ENSVVUG00000016527)	C2CD2 (ENSVVUG00000016600)	ZBTB21 (ENSVVUG00000016612)	UMODL1 (ENSVVUG00000016621)	ABCG1 (ENSVVUG00000016638)	TFF3 (ENSVVUG00000016649)	TFF2 (ENSVVUG00000016652)
Felidae	ANCESTRAL SPECIES	9	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.b.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
Panthera	ANCESTRAL SPECIES	17	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240	ENSGT00940000159245
Tiger	MODERN SPECIES	321	DYRK1A (ENSPTIG00000017042)	KCNJ6 (ENSPTIG00000018401)	KCNJ15 (ENSPTIG00000018526)	ERG (ENSPTIG00000019250)	ETS2 (ENSPTIG00000021524)	PSMG1 (ENSPTIG00000021655)	BRWD1 (ENSPTIG00000021862)	HMGN1 (ENSPTIG00000009429)	GET1 (ENSPTIG00000009749)	LCA5L (ENSPTIG00000010441)	SH3BGR (ENSPTIG00000011349)	B3GALT5 (ENSPTIG00000012211)	PCP4 (ENSPTIG00000012652)	DSCAM (ENSPTIG00000012935)	BACE2 (ENSPTIG00000015773)	FAM3B (ENSPTIG00000016871) ##22	MX1 (ENSPTIG00000017829)	TMPRSS2 (ENSPTIG00000018133)	PRDM15 (ENSPTIG00000019585)	C2CD2 (ENSPTIG00000020254)
Panthera_a	ANCESTRAL SPECIES	21	ENSGT00950000183064.b	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686	ENSGT00940000155207.a.b
lion	MODERN SPECIES	9	VPS26C (ENSPLOG00000010027)	DYRK1A (ENSPLOG00000010164)	KCNJ6 (ENSPLOG00000010233)	KCNJ15 (ENSPLOG00000010261)	ERG (ENSPLOG00000011044)	ETS2 (ENSPLOG00000011156)	PSMG1 (ENSPLOG00000011266)	BRWD1 (ENSPLOG00000011385)	GET1 (ENSPLOG00000011476)	LCA5L (ENSPLOG00000011547)	SH3BGR (ENSPLOG00000011642)	B3GALT5 (ENSPLOG00000011684)	PCP4 (ENSPLOG00000011697)	DSCAM (ENSPLOG00000011858)	BACE2 (ENSPLOG00000012363)	FAM3B (ENSPLOG00000012689) ##22	MX1 (ENSPLOG00000012833)	TMPRSS2 (ENSPLOG00000013265)	ENSPLOG00000013356	ENSPLOG00000013430	ENSPLOG00000013454	RIPK4 (ENSPLOG00000013487)	PRDM15 (ENSPLOG00000013728)	C2CD2 (ENSPLOG00000014058)	ZBTB21 (ENSPLOG00000014100)	UMODL1 (ENSPLOG00000014146)	ABCG1 (ENSPLOG00000014424)	ENSPLOG00000014592	TFF2 (ENSPLOG00000014654)	ENSPLOG00000014767	TMPRSS3 (ENSPLOG00000014832)
leopard	MODERN SPECIES	81	VPS26C (ENSPPRG00000007535)	DYRK1A (ENSPPRG00000007385)	KCNJ6 (ENSPPRG00000006638)	KCNJ15 (ENSPPRG00000019894)	ERG (ENSPPRG00000006437)	ETS2 (ENSPPRG00000006275)	PSMG1 (ENSPPRG00000006180)	HMGN1 (ENSPPRG00000005458)	GET1 (ENSPPRG00000005407)	LCA5L (ENSPPRG00000004820)	SH3BGR (ENSPPRG00000004726)	B3GALT5 (ENSPPRG00000004649)	PCP4 (ENSPPRG00000004577)	DSCAM (ENSPPRG00000004553)	BACE2 (ENSPPRG00000003944)	FAM3B (ENSPPRG00000003865) ##22	MX1 (ENSPPRG00000003339)	TMPRSS2 (ENSPPRG00000002829)
Cat	MODERN SPECIES	240	KCNJ15 (ENSFCAG00000025648)	ERG (ENSFCAG00000007485)	ETS2 (ENSFCAG00000007489)	ENSFCAG00000053464	PSMG1 (ENSFCAG00000038855)	BRWD1 (ENSFCAG00000031344)	ENSFCAG00000046512	GET1 (ENSFCAG00000042925)	LCA5L (ENSFCAG00000008508)	SH3BGR (ENSFCAG00000004671)	B3GALT5 (ENSFCAG00000004673)	IGSF5 (ENSFCAG00000004674)	PCP4 (ENSFCAG00000035623)	DSCAM (ENSFCAG00000008209)	BACE2 (ENSFCAG00000001969)	FAM3B (ENSFCAG00000001970) ##22	MX1 (ENSFCAG00000008068)	TMPRSS2 (ENSFCAG00000008071)	ENSFCAG00000053296	ENSFCAG00000044509	ENSFCAG00000039699	RIPK4 (ENSFCAG00000012694)	PRDM15 (ENSFCAG00000012695)	C2CD2 (ENSFCAG00000012696)	ZBTB21 (ENSFCAG00000036093)	UMODL1 (ENSFCAG00000012699)	ABCG1 (ENSFCAG00000012701)	TFF3 (ENSFCAG00000029722)	TFF2 (ENSFCAG00000012703)	TFF1 (ENSFCAG00000012704)	TMPRSS3 (ENSFCAG00000012705)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
Chiroptera	ANCESTRAL SPECIES	35	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163845	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841
Microchiroptera	ANCESTRAL SPECIES	37	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163845	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841
Microbat	MODERN SPECIES	1502															BACE2 (ENSMLUG00000014539)	FAM3B (ENSMLUG00000014543) ##22	ENSMLUG00000024389	MX1 (ENSMLUG00000011447)	ENSMLUG00000011487
Megabat	MODERN SPECIES	2729																ENSPVAG00000004303 ##22
Equus	ANCESTRAL SPECIES	42	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163258.b	ENSGT00940000161526.b.b.a.a.a	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
Donkey	MODERN SPECIES	9	KCNJ6 (ENSEASG00005006078)	KCNJ15 (ENSEASG00005025006)	ERG (ENSEASG00005006076)	ETS2 (ENSEASG00005006072)	PSMG1 (ENSEASG00005006069)	BRWD1 (ENSEASG00005006066)	HMGN1 (ENSEASG00005036575)	GET1 (ENSEASG00005027299)	LCA5L (ENSEASG00005006060)	SH3BGR (ENSEASG00005006056)	B3GALT5 (ENSEASG00005032992)	ENSEASG00005006052	PCP4 (ENSEASG00005028031)	DSCAM (ENSEASG00005006046)	BACE2 (ENSEASG00005006036)	FAM3B (ENSEASG00005029773) ##22	MX2 (ENSEASG00005004002)	MX1 (ENSEASG00005003911)	ENSEASG00005003908	ENSEASG00005032518	ENSEASG00005014723	ENSEASG00005024756	PRDM15 (ENSEASG00005003891)	C2CD2 (ENSEASG00005003887)	ZBTB21 (ENSEASG00005030372)	UMODL1 (ENSEASG00005003854)	ABCG1 (ENSEASG00005003849)	ENSEASG00005025530	TFF2 (ENSEASG00005003842)	TFF1 (ENSEASG00005003840)	TMPRSS3 (ENSEASG00005003829)
Horse	MODERN SPECIES	18	KCNJ6 (ENSECAG00000004703)	KCNJ15 (ENSECAG00000008811)	ERG (ENSECAG00000010667)	ETS2 (ENSECAG00000021269)	PSMG1 (ENSECAG00000060286)	BRWD1 (ENSECAG00000022262)	ENSECAG00000059753	GET1 (ENSECAG00000007859)	LCA5L (ENSECAG00000008618)	SH3BGR (ENSECAG00000010747)	B3GALT5 (ENSECAG00000004805)	IGSF5 (ENSECAG00000012049)	PCP4 (ENSECAG00000012551)	DSCAM (ENSECAG00000012936)	BACE2 (ENSECAG00000005305)	FAM3B (ENSECAG00000043951) ##22	MX2 (ENSECAG00000049815)	MX1 (ENSECAG00000011776)	TMPRSS2 (ENSECAG00000022289)	ENSECAG00000053969	ENSECAG00000007982	ENSECAG00000015072	RIPK4 (ENSECAG00000008330)	PRDM15 (ENSECAG00000017225)	C2CD2 (ENSECAG00000006419)	ZBTB21 (ENSECAG00000013046)	UMODL1 (ENSECAG00000013946)	ABCG1 (ENSECAG00000019065)	TFF3 (ENSECAG00000015204)	TFF2 (ENSECAG00000016409)	TFF1 (ENSECAG00000018260)
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b	ENSGT00950000182802.A.ab.a.a.a.a.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Suina	ANCESTRAL SPECIES	35	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.a.a.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.a.b	ENSGT00940000163441.f.a.b	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Chacoan peccary	MODERN SPECIES	99	KCNJ15 (ENSCWAG00000009886)	ERG (ENSCWAG00000009993)	ETS2 (ENSCWAG00000010529)	PSMG1 (ENSCWAG00000010601)	BRWD1 (ENSCWAG00000010679)	ENSCWAG00000010747	ENSCWAG00000010782	ENSCWAG00000010801	ENSCWAG00000010819	SH3BGR (ENSCWAG00000010866)	B3GALT5 (ENSCWAG00000010904)	ENSCWAG00000010918	PCP4 (ENSCWAG00000010963)	DSCAM (ENSCWAG00000011010)	BACE2 (ENSCWAG00000011510)	FAM3B (ENSCWAG00000011663) ##22	MX2 (ENSCWAG00000011842)	MX1 (ENSCWAG00000011993)	TMPRSS2 (ENSCWAG00000012074)	ENSCWAG00000012213	ENSCWAG00000012265	RIPK4 (ENSCWAG00000012285)	PRDM15 (ENSCWAG00000012386)	C2CD2 (ENSCWAG00000012763)	ZBTB21 (ENSCWAG00000012917)	UMODL1 (ENSCWAG00000012980)	ABCG1 (ENSCWAG00000013204)	TFF3 (ENSCWAG00000013544)	TFF2 (ENSCWAG00000013597)	TFF1 (ENSCWAG00000013623)	TMPRSS3 (ENSCWAG00000013680)
Pig	MODERN SPECIES	4	ERG (ENSSSCG00000022318)	ETS2 (ENSSSCG00000038948)	PSMG1 (ENSSSCG00000062206)	BRWD1 (ENSSSCG00000021042)	ENSSSCG00000033733	ENSSSCG00000051671	GET1 (ENSSSCG00000037381)	LCA5L (ENSSSCG00000028122)	SH3BGR (ENSSSCG00000029219)	ENSSSCG00000050754	ENSSSCG00000038056	ENSSSCG00000012071	PCP4 (ENSSSCG00000037110)	DSCAM (ENSSSCG00000012072)	ENSSSCG00000012074	FAM3B (ENSSSCG00000012075) ##22	MX2 (ENSSSCG00000012076)	MX1 (ENSSSCG00000012077)	TMPRSS2 (ENSSSCG00000024336)	ENSSSCG00000020673	ENSSSCG00000036487	RIPK4 (ENSSSCG00000012083)	PRDM15 (ENSSSCG00000012084)	C2CD2 (ENSSSCG00000025821)	ZBTB21 (ENSSSCG00000054999)	UMODL1 (ENSSSCG00000022290)	ABCG1 (ENSSSCG00000027745)	TFF3 (ENSSSCG00000022857)	TFF2 (ENSSSCG00000024320)	TFF1 (ENSSSCG00000034731)	TMPRSS3 (ENSSSCG00000022568)
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b	ENSGT00950000182802.A.ab.a.a.a.a.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b.a.b	ENSGT00950000182802.A.ab.a.a.a.a.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Cetacea	ANCESTRAL SPECIES	10	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.a.a.a.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Odontoceti	ANCESTRAL SPECIES	9	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.a.a.a.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.a.a.a.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841	ENSGT00940000157240
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00950000183178.b.a.jb.b	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.a.a.a.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00950000182802.A.ab.b.b	ENSGT00940000159953.A	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623	ENSGT00940000158589
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00950000183178.b.a.jb.b	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.a.a.a.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00950000182802.A.ab.b.b	ENSGT01030000236716	ENSGT00940000159953.A	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Narwhal	MODERN SPECIES	297	KCNJ15 (ENSMMNG00015004403)	ERG (ENSMMNG00015004343)	ETS2 (ENSMMNG00015004287)	ENSMMNG00015004276	PSMG1 (ENSMMNG00015004262)	BRWD1 (ENSMMNG00015004196)	ENSMMNG00015004161	GET1 (ENSMMNG00015004133)	LCA5L (ENSMMNG00015004108)	SH3BGR (ENSMMNG00015004078)	B3GALT5 (ENSMMNG00015004063)	ENSMMNG00015004044	PCP4 (ENSMMNG00015004028)	DSCAM (ENSMMNG00015003949)	BACE2 (ENSMMNG00015003863)	FAM3B (ENSMMNG00015003809) ##22	ENSMMNG00015003775	ENSMMNG00015003743	TMPRSS2 (ENSMMNG00015003713)	ENSMMNG00015003689	ENSMMNG00015003659	ENSMMNG00015003646	RIPK4 (ENSMMNG00015003627)	PRDM15 (ENSMMNG00015003594)	C2CD2 (ENSMMNG00015003489)	ZBTB21 (ENSMMNG00015003466)	UMODL1 (ENSMMNG00015003254)	ABCG1 (ENSMMNG00015003156)	TFF3 (ENSMMNG00015003140)	TFF2 (ENSMMNG00015003126)	ENSMMNG00015003110
Beluga whale	MODERN SPECIES	111	KCNJ15 (ENSDLEG00000020013)	ERG (ENSDLEG00000019992)	ETS2 (ENSDLEG00000019986)	ENSDLEG00000019984	PSMG1 (ENSDLEG00000019972)	ENSDLEG00000019966	ENSDLEG00000017476	WRB (ENSDLEG00000017158)	LCA5L (ENSDLEG00000017127)	SH3BGR (ENSDLEG00000017102)	B3GALT5 (ENSDLEG00000017088)	IGSF5 (ENSDLEG00000017082)	PCP4 (ENSDLEG00000017075)	DSCAM (ENSDLEG00000021237)	BACE2 (ENSDLEG00000021225)	FAM3B (ENSDLEG00000021216) ##22	ENSDLEG00000021211	ENSDLEG00000021207	TMPRSS2 (ENSDLEG00000021202)	ENSDLEG00000021198	ENSDLEG00000021194	RIPK4 (ENSDLEG00000021191)	PRDM15 (ENSDLEG00000021181)	C2CD2 (ENSDLEG00000021174)	ZBTB21 (ENSDLEG00000021171)	UMODL1 (ENSDLEG00000021156)	ABCG1 (ENSDLEG00000021150)	TFF3 (ENSDLEG00000021148)	TFF2 (ENSDLEG00000021145)	ENSDLEG00000021144	TMPRSS3 (ENSDLEG00000021135)
Vaquita	MODERN SPECIES	15	KCNJ15 (ENSPSNG00000003129)	ERG (ENSPSNG00000003229)	ETS2 (ENSPSNG00000003466)	ENSPSNG00000003490	PSMG1 (ENSPSNG00000003503)	BRWD1 (ENSPSNG00000003542)	ENSPSNG00000003581	GET1 (ENSPSNG00000003633)	LCA5L (ENSPSNG00000003698)	SH3BGR (ENSPSNG00000003727)	B3GALT5 (ENSPSNG00000003756)	ENSPSNG00000003781	PCP4 (ENSPSNG00000003804)	DSCAM (ENSPSNG00000003835)	BACE2 (ENSPSNG00000003936)	FAM3B (ENSPSNG00000003986) ##22	ENSPSNG00000004017	TMPRSS2 (ENSPSNG00000004031)	ENSPSNG00000004058	ENSPSNG00000004073	RIPK4 (ENSPSNG00000004086)	PRDM15 (ENSPSNG00000004163)	C2CD2 (ENSPSNG00000004376)	ZBTB21 (ENSPSNG00000004418)	UMODL1 (ENSPSNG00000004496)	ENSPSNG00000004667	TFF2 (ENSPSNG00000004686)	TFF1 (ENSPSNG00000004712)	TMPRSS3 (ENSPSNG00000004757)	UBASH3A (ENSPSNG00000004836)	RSPH1 (ENSPSNG00000004899)
Dolphin	MODERN SPECIES	2313																FAM3B (ENSTTRG00000000680) ##22	ENSTTRG00000000681	MX1 (ENSTTRG00000000683)	TMPRSS2 (ENSTTRG00000000684)
Sperm whale	MODERN SPECIES	19	ETS2 (ENSPCTG00005006070)	ENSPCTG00005006121	ENSPCTG00005006137	PSMG1 (ENSPCTG00005006154)	BRWD1 (ENSPCTG00005006235)	ENSPCTG00005006378	HMGN1 (ENSPCTG00005006397)	WRB (ENSPCTG00005006465)	LCA5L (ENSPCTG00005006541)	ENSPCTG00005006556	B3GALT5 (ENSPCTG00005006578)	ENSPCTG00005006605	PCP4 (ENSPCTG00005006627)	DSCAM (ENSPCTG00005006665)	BACE2 (ENSPCTG00005006931)	FAM3B (ENSPCTG00005007016) ##22	MX2 (ENSPCTG00005007105)	ENSPCTG00005007261	TMPRSS2 (ENSPCTG00005007309)	RIPK4 (ENSPCTG00005007402)	PRDM15 (ENSPCTG00005007461)	C2CD2 (ENSPCTG00005007843)	UMODL1 (ENSPCTG00005007872)	TFF3 (ENSPCTG00005007980)	TFF2 (ENSPCTG00005008001)	TFF1 (ENSPCTG00005008027)	TMPRSS3 (ENSPCTG00005008050)	UBASH3A (ENSPCTG00005008150)	RSPH1 (ENSPCTG00005008271)	SLC37A1 (ENSPCTG00005008374)	CBS (ENSPCTG00005008728)
Blue whale	MODERN SPECIES	15	KCNJ15 (ENSBMSG00010004859)	ERG (ENSBMSG00010004899)	ETS2 (ENSBMSG00010005046)	PSMG1 (ENSBMSG00010005067)	BRWD1 (ENSBMSG00010005088)	ENSBMSG00010005108	ENSBMSG00010005116	GET1 (ENSBMSG00010005140)	LCA5L (ENSBMSG00010005153)	ENSBMSG00010005171	B3GALT5 (ENSBMSG00010005204)	ENSBMSG00010005220	PCP4 (ENSBMSG00010005232)	DSCAM (ENSBMSG00010005253)	BACE2 (ENSBMSG00010005328)	FAM3B (ENSBMSG00010005351) ##22	ENSBMSG00010005372	ENSBMSG00010005388	MX1 (ENSBMSG00010005420)	TMPRSS2 (ENSBMSG00010005432)	ENSBMSG00010005449	ENSBMSG00010005452	RIPK4 (ENSBMSG00010005460)	PRDM15 (ENSBMSG00010005502)	C2CD2 (ENSBMSG00010005605)	ZBTB21 (ENSBMSG00010005664)	UMODL1 (ENSBMSG00010005688)	ABCG1 (ENSBMSG00010005783)	TFF3 (ENSBMSG00010005816)	TFF2 (ENSBMSG00010005825)	TFF1 (ENSBMSG00010005833)
Pecora	ANCESTRAL SPECIES	8	ENSGT00940000160525	ENSGT00390000010145.c.b	ENSGT00940000156421	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b.a.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b	ENSGT00940000161526.a	ENSGT00940000161526.b.j	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Yarkand deer	MODERN SPECIES	10	NUDT16 (ENSCHYG00000025324)	NEK11 (ENSCHYG00000025386)	ASTE1 (ENSCHYG00000025620)	ATP2C1 (ENSCHYG00000025704)	BRWD1 (ENSCHYG00000026058)	ENSCHYG00000026355	GET1 (ENSCHYG00000026385)	LCA5L (ENSCHYG00000026397)	SH3BGR (ENSCHYG00000026419)	B3GALT5 (ENSCHYG00000026443)	ENSCHYG00000026450	PCP4 (ENSCHYG00000026460)	DSCAM (ENSCHYG00000026466)	BACE2 (ENSCHYG00000026498)	ENSCHYG00000026515	FAM3B (ENSCHYG00000026526) ##22	MX2 (ENSCHYG00000026550)	MX1 (ENSCHYG00000026565)	TMPRSS2 (ENSCHYG00000026573)	ENSCHYG00000026581	ENSCHYG00000026585	ENSCHYG00000026590	ENSCHYG00000026595	RIPK4 (ENSCHYG00000026601)	PRDM15 (ENSCHYG00000026615)	C2CD2 (ENSCHYG00000007736)	ZBTB21 (ENSCHYG00000007803)	UMODL1 (ENSCHYG00000007853)	ABCG1 (ENSCHYG00000008044)	ENSCHYG00000008123	TFF2 (ENSCHYG00000008137)
Percora_a	ANCESTRAL SPECIES	7	ENSGT00940000160525	ENSGT00390000010145.c.b	ENSGT00940000156421	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b.a.b.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b.a	ENSGT00940000161526.a	ENSGT00940000161526.b.j	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Bovidae	ANCESTRAL SPECIES	9	ENSGT00940000160525	ENSGT00390000010145.c.b	ENSGT00940000156421	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b.a.b.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000161526.a	ENSGT00940000161526.b.j.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334
Bovinae	ANCESTRAL SPECIES	6	ENSGT00940000160525	ENSGT00390000010145.c.b	ENSGT00940000156421	ENSGT00390000003718.d.sb.a	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b.a.b.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000161526.a	ENSGT00940000161526.b.j.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334
Bos	ANCESTRAL SPECIES	7	ENSGT00390000010145.c.b	ENSGT00940000156421	ENSGT00390000003718.d.sb.a	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00950000182802.A.ab.b.a.b.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000161526.a	ENSGT00940000161526.b.j.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000160525.h	ENSGT00390000010145.c.b	ENSGT00940000156421	ENSGT00390000003718.d.sb.a	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b.a.b.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000161526.a	ENSGT00940000161526.b.j.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334
Wild yak	MODERN SPECIES	530															BACE2 (ENSBMUG00000018798)	FAM3B (ENSBMUG00000018837) ##22	MX2 (ENSBMUG00000018867)	MX1 (ENSBMUG00000018928)	TMPRSS2 (ENSBMUG00000018962)	ENSBMUG00000018981	ENSBMUG00000018987	ENSBMUG00000019002	RIPK4 (ENSBMUG00000019020)	PRDM15 (ENSBMUG00000019098)	C2CD2 (ENSBMUG00000019154)	ENSBMUG00000019176	UMODL1 (ENSBMUG00000019328)	ABCG1 (ENSBMUG00000019411)	TFF3 (ENSBMUG00000019437)
Domestic yak	MODERN SPECIES		NUDT16 (ENSBGRG00000008026)	NEK11 (ENSBGRG00000008075)	ASTE1 (ENSBGRG00000008357)	ATP2C1 (ENSBGRG00000008500)	BRWD1 (ENSBGRG00000009216)	ENSBGRG00000011102	ENSBGRG00000011188	ENSBGRG00000011465	LCA5L (ENSBGRG00000011685)	SH3BGR (ENSBGRG00000011752)	ENSBGRG00000011815	ENSBGRG00000011865	PCP4 (ENSBGRG00000011953)	DSCAM (ENSBGRG00000012032)	BACE2 (ENSBGRG00000013059)	FAM3B (ENSBGRG00000013649) ##22	MX1 (ENSBGRG00000014066)	TMPRSS2 (ENSBGRG00000014644)	ENSBGRG00000014855	ENSBGRG00000014875	ENSBGRG00000014892	RIPK4 (ENSBGRG00000014918)	PRDM15 (ENSBGRG00000014984)	ENSBGRG00000015730	C2CD2 (ENSBGRG00000015751)	ZBTB21 (ENSBGRG00000016033)	UMODL1 (ENSBGRG00000016109)	ABCG1 (ENSBGRG00000017210)	TFF3 (ENSBGRG00000017602)	TFF2 (ENSBGRG00000017623)	TFF1 (ENSBGRG00000017683)
Bos_b	ANCESTRAL SPECIES	5	ENSGT00390000010145.c.b	ENSGT00940000156421	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.bb	ENSGT00390000011549.k.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT01030000238221	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a	ENSGT00940000161526.a	ENSGT00940000161526.b.j.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT01100000263480.a.a.b.a.b.b.b.a.a.a.b.b.a.a.a.a.a.a.b.b.a	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334
Hybrid Bos Indicus	MODERN SPECIES		PSMG1 (ENSBIXG00005004043)	BRWD1 (ENSBIXG00005023566)	ENSBIXG00005023526	ENSBIXG00005023486	GET1 (ENSBIXG00005023381)	LCA5L (ENSBIXG00005003991)	SH3BGR (ENSBIXG00005023251)	ENSBIXG00005023221	B3GALT5 (ENSBIXG00005023200)	ENSBIXG00005023175	ENSBIXG00005005999	PCP4 (ENSBIXG00005003943)	DSCAM (ENSBIXG00005007073)	ENSBIXG00005003909	BACE2 (ENSBIXG00005022860)	FAM3B (ENSBIXG00005022792) ##22	MX2 (ENSBIXG00005022650)	MX1 (ENSBIXG00005022624)	TMPRSS2 (ENSBIXG00005003825)	ENSBIXG00005022425	ENSBIXG00005003820	ENSBIXG00005022411	RIPK4 (ENSBIXG00005022388)	PRDM15 (ENSBIXG00005022361)	ENSBIXG00005022313	C2CD2 (ENSBIXG00005022294)	ENSBIXG00005022244	UMODL1 (ENSBIXG00005022204)	ABCG1 (ENSBIXG00005021948)	ENSBIXG00005021724	TFF2 (ENSBIXG00005003655)
Cow	MODERN SPECIES		ATP2C1 (ENSBTAG00000011626)	ENSBTAG00000050167	PSMG1 (ENSBTAG00000013600)	BRWD1 (ENSBTAG00000013602)	HMGN1 (ENSBTAG00000018768)	ENSBTAG00000023106	GET1 (ENSBTAG00000013629)	LCA5L (ENSBTAG00000030993)	SH3BGR (ENSBTAG00000007068)	B3GALT5 (ENSBTAG00000023407)	IGSF5 (ENSBTAG00000002029)	PCP4 (ENSBTAG00000051421)	DSCAM (ENSBTAG00000004754)	ENSBTAG00000054486	BACE2 (ENSBTAG00000000394)	FAM3B (ENSBTAG00000030921) ##22	MX2 (ENSBTAG00000008471)	MX1 (ENSBTAG00000030913)	TMPRSS2 (ENSBTAG00000009132)	ENSBTAG00000050235	ENSBTAG00000045771	ENSBTAG00000046015	RIPK4 (ENSBTAG00000021251)	PRDM15 (ENSBTAG00000021253)	C2CD2 (ENSBTAG00000021259)	ZBTB21 (ENSBTAG00000030836)	UMODL1 (ENSBTAG00000021270)	ABCG1 (ENSBTAG00000021272)	TFF3 (ENSBTAG00000021276)	TFF2 (ENSBTAG00000030814)	TFF1 (ENSBTAG00000048276)
American bison	MODERN SPECIES	2975	ATP2C1 (ENSBBBG00000013474)	ENSBBBG00000013524	PSMG1 (ENSBBBG00000013540)	ENSBBBG00000013544	BRWD1 (ENSBBBG00000013614)	ENSBBBG00000013623	GET1 (ENSBBBG00000013645)	LCA5L (ENSBBBG00000013656)	SH3BGR (ENSBBBG00000013682)	B3GALT5 (ENSBBBG00000013686)	ENSBBBG00000013694	PCP4 (ENSBBBG00000001532)	ENSBBBG00000001530	DSCAM (ENSBBBG00000001524)	BACE2 (ENSBBBG00000013772)	FAM3B (ENSBBBG00000009103) ##22	MX2 (ENSBBBG00000013811)	MX1 (ENSBBBG00000013880)	TMPRSS2 (ENSBBBG00000013909)	ENSBBBG00000007548	RIPK4 (ENSBBBG00000013940)	PRDM15 (ENSBBBG00000013969)	C2CD2 (ENSBBBG00000003069)	UMODL1 (ENSBBBG00000003135)	ABCG1 (ENSBBBG00000003152)	TFF3 (ENSBBBG00000003155)	TFF2 (ENSBBBG00000009109)	TFF1 (ENSBBBG00000014105)	TMPRSS3 (ENSBBBG00000014114)	UBASH3A (ENSBBBG00000014132)	RSPH1 (ENSBBBG00000007983)
Caprinae	ANCESTRAL SPECIES	8	ENSGT00940000156421	ENSGT00500000044950	ENSGT00950000185720	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.b.b.b	ENSGT00440000033232.c.b.b.b	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000158524.h	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT01030000238221	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b	ENSGT00960000187239	ENSGT00940000161526.b.j.a.a	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT00940000162623
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020002122	ENSOARG00020002138	PSMG1 (ENSOARG00020002147)	BRWD1 (ENSOARG00020002189)	ENSOARG00020002318	GET1 (ENSOARG00020002343)	LCA5L (ENSOARG00020002371)	SH3BGR (ENSOARG00020002389)	B3GALT5 (ENSOARG00020002400)	ENSOARG00020002404	PCP4 (ENSOARG00020002413)	DSCAM (ENSOARG00020002425)	ENSOARG00020002543	ENSOARG00020002557	BACE2 (ENSOARG00020002588)	ENSOARG00020002630 ##22	MX2 (ENSOARG00020002675)	ENSOARG00020002693 ##22	MX1 (ENSOARG00020002706)	TMPRSS2 (ENSOARG00020002743)	ENSOARG00020002760	ENSOARG00020002764	ENSOARG00020002770	RIPK4 (ENSOARG00020002780)	ENSOARG00020002794	ENSOARG00020002815	C2CD2 (ENSOARG00020002824)	ZBTB21 (ENSOARG00020002853)	UMODL1 (ENSOARG00020002885)	ABCG1 (ENSOARG00020003108)	TFF3 (ENSOARG00020003218)
Rambouillet Sheep	MODERN SPECIES		PSMG1 (ENSOARG00020002147)	BRWD1 (ENSOARG00020002189)	ENSOARG00020002318	GET1 (ENSOARG00020002343)	LCA5L (ENSOARG00020002371)	SH3BGR (ENSOARG00020002389)	B3GALT5 (ENSOARG00020002400)	ENSOARG00020002404	PCP4 (ENSOARG00020002413)	DSCAM (ENSOARG00020002425)	ENSOARG00020002543	ENSOARG00020002557	BACE2 (ENSOARG00020002588)	ENSOARG00020002630 ##22	MX2 (ENSOARG00020002675)	ENSOARG00020002693 ##22	MX1 (ENSOARG00020002706)	TMPRSS2 (ENSOARG00020002743)	ENSOARG00020002760	ENSOARG00020002764	ENSOARG00020002770	RIPK4 (ENSOARG00020002780)	ENSOARG00020002794	ENSOARG00020002815	C2CD2 (ENSOARG00020002824)	ZBTB21 (ENSOARG00020002853)	UMODL1 (ENSOARG00020002885)	ABCG1 (ENSOARG00020003108)	TFF3 (ENSOARG00020003218)	TFF2 (ENSOARG00020003264)	TFF1 (ENSOARG00020003284)
Goat	MODERN SPECIES		ENSCHIG00000022501	BRWD1 (ENSCHIG00000013528)	ENSCHIG00000008037	ENSCHIG00000000879	GET1 (ENSCHIG00000008859)	LCA5L (ENSCHIG00000013759)	SH3BGR (ENSCHIG00000018188)	B3GALT5 (ENSCHIG00000003423)	ENSCHIG00000010437	PCP4 (ENSCHIG00000026748)	DSCAM (ENSCHIG00000010917)	ENSCHIG00000025338	ENSCHIG00000015454	BACE2 (ENSCHIG00000019839)	ENSCHIG00000016035	FAM3B (ENSCHIG00000017490) ##22	MX2 (ENSCHIG00000014150)	MX1 (ENSCHIG00000001865)	TMPRSS2 (ENSCHIG00000024477)	ENSCHIG00000007612	ENSCHIG00000011563	ENSCHIG00000008117	RIPK4 (ENSCHIG00000012268)	PRDM15 (ENSCHIG00000016222)	C2CD2 (ENSCHIG00000012559)	ZBTB21 (ENSCHIG00000022184)	ENSCHIG00000016072	ABCG1 (ENSCHIG00000007254)	TFF3 (ENSCHIG00000016300)	TFF2 (ENSCHIG00000026146)	TFF1 (ENSCHIG00000020308)
Siberian musk deer	MODERN SPECIES	1185														ENSMMSG00000009000	BACE2 (ENSMMSG00000009034)	FAM3B (ENSMMSG00000009128) ##22	MX2 (ENSMMSG00000009201)	MX1 (ENSMMSG00000009295)	TMPRSS2 (ENSMMSG00000009350)	ENSMMSG00000009563	RIPK4 (ENSMMSG00000009579)	PRDM15 (ENSMMSG00000009607)	C2CD2 (ENSMMSG00000009701)	ZBTB21 (ENSMMSG00000009739)	UMODL1 (ENSMMSG00000009762)	ABCG1 (ENSMMSG00000009849)	TFF3 (ENSMMSG00000009944)	TFF2 (ENSMMSG00000009956)	TFF1 (ENSMMSG00000009981)	TMPRSS3 (ENSMMSG00000010004)	UBASH3A (ENSMMSG00000010155)
Camelidae	ANCESTRAL SPECIES		ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000182802.A.ab.a.a.a.a.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000163266	ENSGT00940000155686	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT00940000162416	ENSGT00940000161334	ENSGT01070000254012	ENSGT00940000162623	ENSGT00940000158589	ENSGT00940000160841
Arabian camel	MODERN SPECIES		KCNJ15 (ENSCDRG00005007361)	ERG (ENSCDRG00005007389)	ETS2 (ENSCDRG00005007775)	PSMG1 (ENSCDRG00005007842)	BRWD1 (ENSCDRG00005007896)	ENSCDRG00005008049	ENSCDRG00005008082	GET1 (ENSCDRG00005008195)	LCA5L (ENSCDRG00005008281)	ENSCDRG00005008380	B3GALT5 (ENSCDRG00005008464)	ENSCDRG00005008490	PCP4 (ENSCDRG00005008560)	DSCAM (ENSCDRG00005008610)	BACE2 (ENSCDRG00005008744)	FAM3B (ENSCDRG00005008840) ##22	ENSCDRG00005009009	ENSCDRG00005009188	ENSCDRG00005009225	ENSCDRG00005009289	ENSCDRG00005009347	TMPRSS2 (ENSCDRG00005009423)	ENSCDRG00005009585	RIPK4 (ENSCDRG00005009625)	PRDM15 (ENSCDRG00005009685)	C2CD2 (ENSCDRG00005009991)	ENSCDRG00005010047	UMODL1 (ENSCDRG00005010088)	ABCG1 (ENSCDRG00005010367)	ENSCDRG00005010551	TFF2 (ENSCDRG00005010588)
Alpaca	MODERN SPECIES	2380																ENSVPAG00000010192 ##22
Atlantogenata	ANCESTRAL SPECIES	110	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22
Afrotheria	ANCESTRAL SPECIES	144	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22
Afrotheria_a	ANCESTRAL SPECIES	147	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163238	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22
Elephant	MODERN SPECIES	513	KCNJ6 (ENSLAFG00000007238)	KCNJ15 (ENSLAFG00000013702)	ERG (ENSLAFG00000005455)	ETS2 (ENSLAFG00000004469)	PSMG1 (ENSLAFG00000015096)	BRWD1 (ENSLAFG00000015097)	GET1 (ENSLAFG00000008072)	LCA5L (ENSLAFG00000012558)	ENSLAFG00000027123	ENSLAFG00000005853	ENSLAFG00000026827	ENSLAFG00000005039	PCP4 (ENSLAFG00000017850)	DSCAM (ENSLAFG00000005372)	BACE2 (ENSLAFG00000027997)	FAM3B (ENSLAFG00000005755) ##22	ENSLAFG00000016541	ENSLAFG00000029694	MX2 (ENSLAFG00000009018)	TMPRSS2 (ENSLAFG00000027954)	RIPK4 (ENSLAFG00000008863)	PRDM15 (ENSLAFG00000008866)	C2CD2 (ENSLAFG00000008880)	ZBTB21 (ENSLAFG00000003660)	UMODL1 (ENSLAFG00000007706)	ABCG1 (ENSLAFG00000009158)	TFF3 (ENSLAFG00000012686)	TFF2 (ENSLAFG00000021463)	ENSLAFG00000023145	TMPRSS3 (ENSLAFG00000031726)	UBASH3A (ENSLAFG00000012601)
Hyrax	MODERN SPECIES	6266																ENSPCAG00000015691 ##22
Tenrec	MODERN SPECIES	7460																ENSETEG00000010798 ##22
Xenarthra	ANCESTRAL SPECIES	1737															ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22
Armadillo	MODERN SPECIES	4557														ENSDNOG00000037206	BACE2 (ENSDNOG00000025458)	FAM3B (ENSDNOG00000003882) ##22
Anura	ANCESTRAL SPECIES	60	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00950000185616	ENSGT00950000182802.D	ENSGT00940000165905	ENSGT00940000159847	ENSGT00940000160964	ENSGT00940000163947	ENSGT01090000260929	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155686.b	ENSGT00940000155686.a	ENSGT00940000155207.a.b	ENSGT00940000159908	ENSGT00940000157890	ENSGT00530000063764.a	ENSGT00940000161028	ENSGT00940000159975	ENSGT00940000160131	ENSGT01070000254068	ENSGT00940000158589	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C	ENSGT01050000244864.D
Frog	MODERN SPECIES	2	hmgn1 (ENSXETG00000025097)	get1 (ENSXETG00000023739)	sh3bgr (ENSXETG00000042349)	ENSXETG00000047345	b3galt5.2 (ENSXETG00000045829)	b3galt5.3 (ENSXETG00000044184)	ENSXETG00000042777	b3galt5.4 (ENSXETG00000044775)	ENSXETG00000006113	b3galt5l (ENSXETG00000006123)	igsf5 (ENSXETG00000006124)	ENSXETG00000038478	ENSXETG00000046142	dscam (ENSXETG00000033779)	bace2 (ENSXETG00000005167)	fam3b (ENSXETG00000005180) ##22	ENSXETG00000047752	mx1 (ENSXETG00000005177)	tmprss2.15 (ENSXETG00000031788)	ENSXETG00000042799	tmprss2.13 (ENSXETG00000046938)	tmprss2.12 (ENSXETG00000000063)	ENSXETG00000045692	ENSXETG00000027108	ENSXETG00000043775	tmprss2.6 (ENSXETG00000040037)	ENSXETG00000048224	tmprss2.6 (ENSXETG00000005963)	ENSXETG00000043492	ENSXETG00000027064	ENSXETG00000047075
Leishan spiny toad	MODERN SPECIES	5	BRWD1 (ENSLLEG00000005021)	ENSLLEG00000004967	ENSLLEG00000004942	ENSLLEG00000004920	ENSLLEG00000004876	SH3BGR (ENSLLEG00000003820)	ENSLLEG00000003815	ENSLLEG00000003809	ENSLLEG00000003795	ENSLLEG00000003788	ENSLLEG00000003783	DSCAM (ENSLLEG00000003644)	ENSLLEG00000003550	BACE2 (ENSLLEG00000003527)	ENSLLEG00000003513	FAM3B (ENSLLEG00000003471) ##22	ENSLLEG00000003421	ENSLLEG00000003403	ENSLLEG00000003362	ENSLLEG00000003346	TMPRSS2 (ENSLLEG00000003317)	RIPK4 (ENSLLEG00000003301)	ENSLLEG00000003182	ENSLLEG00000003156	ENSLLEG00000003103	ENSLLEG00000003046	ENSLLEG00000003002	ABCG1 (ENSLLEG00000002918)	ENSLLEG00000002888	ENSLLEG00000002841	ENSLLEG00000002824
Coelacanth	MODERN SPECIES	359											ENSLACG00000001489	PCP4 (ENSLACG00000022631)	DSCAM (ENSLACG00000005272)	ENSLACG00000013522	BACE2 (ENSLACG00000015003)	FAM3B (ENSLACG00000015233) ##22	ENSLACG00000015439	TMPRSS2 (ENSLACG00000015538)	RIPK4 (ENSLACG00000015865)	zgc:112083 (ENSLACG00000016085)	PRDM15 (ENSLACG00000016206)	TRAPPC10 (ENSLACG00000016449)	CRYAA (ENSLACG00000016822)	SIK1 (ENSLACG00000017075)	AGPAT3 (ENSLACG00000017316)	PDXK (ENSLACG00000022240)
Actinopterygii	ANCESTRAL SPECIES	5	ENSGT00940000157408	ENSGT01080000257365.b.a.b.a.a	ENSGT00990000203615.b.a.a.a.b	ENSGT00940000160662	ENSGT00940000160202	ENSGT00500000044950	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000165615	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000155207.a.b	ENSGT00670000098061	ENSGT00390000012388	ENSGT01030000234626.E	ENSGT00940000167100	ENSGT00940000154907.a.a	ENSGT00940000166189	ENSGT00940000154907.a.b	ENSGT00730000110920.a	ENSGT00940000160984	ENSGT00940000166134	ENSGT00940000156163	ENSGT00940000159690	ENSGT00890000139503	ENSGT00940000157806
Reedfish	MODERN SPECIES	12	vps26c (ENSECRG00000007541)	dyrk1ab (ENSECRG00000007487)	KCNJ6 (ENSECRG00000007465)	KCNJ15 (ENSECRG00000007456)	erg (ENSECRG00000007416)	ETS2 (ENSECRG00000007384)	psmg1 (ENSECRG00000007374)	BRWD1 (ENSECRG00000007330)	ENSECRG00000007315	get1 (ENSECRG00000007303)	sh3bgr (ENSECRG00000007282)	ENSECRG00000007261	pcp4a (ENSECRG00000007251)	DSCAM (ENSECRG00000007139)	bace2 (ENSECRG00000007072)	FAM3B (ENSECRG00000007065) ##22	TMPRSS2 (ENSECRG00000006779)	ATM (ENSECRG00000006745)	ENSECRG00000006723	acat1 (ENSECRG00000006706)	mmp30 (ENSECRG00000006685)	MMP1 (ENSECRG00000006675)	MMP1 (ENSECRG00000006660)	MMP1 (ENSECRG00000006653)	ENSECRG00000005212	ENSECRG00000005047	MMP20 (ENSECRG00000005019)	MMP1 (ENSECRG00000004986)	MMP1 (ENSECRG00000004020)	MMP1 (ENSECRG00000003949)	MMP1 (ENSECRG00000003942)
Neopterygii	ANCESTRAL SPECIES	57	ENSGT00940000160956	ENSGT00940000159187	ENSGT00390000016695	ENSGT00980000203400	ENSGT00940000153259.a.a.b	ENSGT00950000183171.B	ENSGT00950000183107.a.b.a	ENSGT00390000008610.a.b.a.a.b	ENSGT00560000077266.b	ENSGT00940000159847	ENSGT00940000165615	ENSGT00940000163947	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b ##22	ENSGT00940000164201.d	ENSGT00940000155207.a.b	ENSGT00670000098061	ENSGT00390000012388	ENSGT00940000160903	ENSGT00940000156340.b	ENSGT00940000161277	ENSGT01030000234626.E	ENSGT00940000167100	ENSGT00940000154907.a.a	ENSGT00940000166189	ENSGT00940000154907.a.b	ENSGT00730000110920.a	ENSGT00940000160984	ENSGT00940000166134
Spotted gar	MODERN SPECIES	669	zdhhc20a (ENSLOCG00000001760)	micu2 (ENSLOCG00000001747)	FGF9 (ENSLOCG00000001730)	sgcg (ENSLOCG00000001705)	SACS (ENSLOCG00000001682)	TNFRSF19 (ENSLOCG00000001649)	MIPEP (ENSLOCG00000001633)	BRWD1 (ENSLOCG00000001608)	GET1 (ENSLOCG00000001591)	ENSLOCG00000001582	SH3BGR (ENSLOCG00000001571)	ENSLOCG00000001556	pcp4a (ENSLOCG00000001548)	DSCAM (ENSLOCG00000001471)	bace2 (ENSLOCG00000001455)	FAM3B (ENSLOCG00000001440) ##22	ENSLOCG00000001408	tmprss2 (ENSLOCG00000001392)	ATM (ENSLOCG00000001332)	ENSLOCG00000001312	ENSLOCG00000001296	MMP7 (ENSLOCG00000001263)	ENSLOCG00000001242	ENSLOCG00000001235	MMP20 (ENSLOCG00000001207)	mmp13a (ENSLOCG00000001156)	ENSLOCG00000001094	acer3 (ENSLOCG00000001064)	tsku (ENSLOCG00000001049)	gucy2f (ENSLOCG00000001011)	serpinh1a (ENSLOCG00000000987)
Elephant shark	MODERN SPECIES	1655													ENSCMIG00000012579	DSCAM (ENSCMIG00000012582)	bace2 (ENSCMIG00000012594)	ENSCMIG00000012612 ##22	ENSCMIG00000012614	ENSCMIG00000012646	ENSCMIG00000012723	ENSCMIG00000012812	ENSCMIG00000012815	ripk4 (ENSCMIG00000012817)	zgc:112083 (ENSCMIG00000012826)	PRDM15 (ENSCMIG00000012832)	atg101 (ENSCMIG00000012851)	ZBTB21 (ENSCMIG00000012852)	ENSCMIG00000012855	ENSCMIG00000012856	ENSCMIG00000012862	ENSCMIG00000012870	cfap298 (ENSCMIG00000012875)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.a.b ##22
Hagfish	MODERN SPECIES	747			ENSEBUG00000015456	ENSEBUG00000015041	ENSEBUG00000004279	ENSEBUG00000016390	ENSEBUG00000015558	ENSEBUG00000004203	ENSEBUG00000002791	ENSEBUG00000015238	ENSEBUG00000016212	ENSEBUG00000012353	arcn1a (ENSEBUG00000000939)	ENSEBUG00000015251	ENSEBUG00000014083	ENSEBUG00000003143 ##22	GBE1 (ENSEBUG00000011697)	tagln2 (ENSEBUG00000015396)	ENSEBUG00000011346	ENSEBUG00000001444	ENSEBUG00000002781	ENSEBUG00000005202	ENSEBUG00000004175	ENSEBUG00000000758	chmp1b (ENSEBUG00000015228)	ENSEBUG00000003496	ENSEBUG00000016011	ENSEBUG00000003141	ENSEBUG00000016549	ENSEBUG00000011444	ENSEBUG00000009310
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.b ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.b ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.b ##22
Actinopterygii	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.b ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.b ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000183004.a.b.b ##22
Clupeocephala	ANCESTRAL SPECIES	152	ENSGT00510000047602	ENSGT00940000154527.a.a.b.a	ENSGT00640000091774.b	ENSGT00940000157574	ENSGT00390000015805.a	ENSGT00940000180250	ENSGT01100000264068	ENSGT00940000158968	ENSGT00940000158177.b	ENSGT00940000158382	ENSGT00940000167455	ENSGT00950000182952.C.h	ENSGT00950000183004.a.b.a.a #22	ENSGT01030000234563.a.a.c.a	ENSGT00640000091774.a	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT01070000253775.a.d.a.a.a.a	ENSGT00940000156003.l.b	ENSGT01010000222336.b.a.b.a
Otomorpha	ANCESTRAL SPECIES	72					ENSGT01100000264068	ENSGT00940000158968	ENSGT00940000158177.b	ENSGT00940000158382	ENSGT00940000167455	ENSGT00950000182952.C.h	ENSGT00950000183004.a.b.a.a #22	ENSGT01030000234563.a.a.c.a	ENSGT00940000174622	ENSGT00940000154527.a.a.b.b	ENSGT00640000091774.a.c	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT01070000253775.a.d.a.a.a.a	ENSGT00940000156003.l.b	ENSGT01010000222336.b.a.b.a	ENSGT00390000000121	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837
Otophysi	ANCESTRAL SPECIES	104	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833	ENSGT00940000154189.B	ENSGT00940000158686.d	ENSGT00640000091774.a.c.a	ENSGT00640000091774.a.c.b	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522	ENSGT00940000159839.d.b	ENSGT00390000010968.a	ENSGT00940000164299.b.b	ENSGT00940000158576.a.b	ENSGT00390000015299.a.b.b.a.e	ENSGT00390000000068.a.b	ENSGT00390000007427	ENSGT00940000165644.e	ENSGT01030000234588.b.b.b.a.a.b.a.b	ENSGT01030000234588.b.b.b.a.b	ENSGT01030000234588.b.b.b.a.a.b.a.a	ENSGT00950000182926.a	ENSGT00940000153901.a.a.a	ENSGT00940000154709.a.b.b.c
Characiphysae	ANCESTRAL SPECIES	15	ENSGT00940000158113	ENSGT00940000180228	ENSGT00390000007831.c	ENSGT00940000175936	ENSGT00940000178824	ENSGT00980000199676	ENSGT00390000004106	ENSGT00940000154429	ENSGT00390000013715	ENSGT01030000234980	ENSGT00940000162970	ENSGT00390000017006	ENSGT00940000159852.a	ENSGT00390000007925	ENSGT00640000091774.a.c.b	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b.d	ENSGT01070000253775.a.d.a.a.a.b.c	ENSGT01070000253775.a.d.a.a.a.a.c	ENSGT01070000253775.a.d.a.a.a.a.d	ENSGT00950000183017.b.b.a.a	ENSGT00390000010377	ENSGT00940000158861.B	ENSGT00940000157097.h	ENSGT00390000007134	ENSGT00390000011492.a	ENSGT00390000001775.B	ENSGT01030000234852.g	ENSGT00940000155834.i.a	ENSGT00940000157129.f.a
Characiphysae_b	ANCESTRAL SPECIES	102	ENSGT00940000158113	ENSGT00940000180228	ENSGT00390000007831.c	ENSGT00940000175936	ENSGT00940000178824	ENSGT00980000199676	ENSGT00390000004106	ENSGT00940000154429	ENSGT00390000013715	ENSGT01030000234980	ENSGT00940000162970	ENSGT00390000017006	ENSGT00940000159852.a	ENSGT00390000007925	ENSGT00640000091774.a.c.b	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b.d	ENSGT01070000253775.a.d.a.a.a.b.c	ENSGT01070000253775.a.d.a.a.a.a.c	ENSGT01070000253775.a.d.a.a.a.a.d	ENSGT00950000183017.b.b.a.a	ENSGT00390000010377	ENSGT00940000158861.B	ENSGT00940000157097.h	ENSGT00390000007134	ENSGT00390000011492.a	ENSGT00390000001775.B	ENSGT01030000234852.g
Characoidei	ANCESTRAL SPECIES	2	ENSGT00390000009048.a.a.h	ENSGT00940000158701.b	ENSGT00390000018319.a.a.a.b.d.b	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833	ENSGT00940000154189.B	ENSGT00940000158686.d	ENSGT00640000091774.a.c.a	ENSGT00640000091774.a.c.b	ENSGT00950000183004.a.b.b ##22	ENSGT00940000159839.d.b	ENSGT00390000010968.a	ENSGT00940000164299.b.b	ENSGT00940000158576.a.b	ENSGT00390000015299.a.b.b.a.e	ENSGT00390000000068.a.b	ENSGT00390000007427	ENSGT00940000165644.e	ENSGT01030000234588.b.b.b.a.a.b.a.b	ENSGT01030000234588.b.b.b.a.b	ENSGT01030000234588.b.b.b.a.a.b.a.a	ENSGT00950000182926.a	ENSGT00940000153901.a.a.a	ENSGT00940000154709.a.b.b.c	ENSGT00940000155504
Red-bellied piranha	MODERN SPECIES	14	ENSPNAG00000022016	cart2 (ENSPNAG00000021749)	zgc:193812 (ENSPNAG00000021711)	ENSPNAG00000021683	sh3gl3b (ENSPNAG00000021567)	nedd1 (ENSPNAG00000021510)	lyrm5b (ENSPNAG00000021436)	si:ch211-59o9.10 (ENSPNAG00000021419)	sycp3 (ENSPNAG00000021372)	actr6 (ENSPNAG00000021050)	gtse1 (ENSPNAG00000021021)	atp2b1b (ENSPNAG00000005335)	zgc:171459 (ENSPNAG00000020891)	zgc:113426 (ENSPNAG00000020885)	ENSPNAG00000020874	zgc:101783 (ENSPNAG00000020851) ##22	ENSPNAG00000020670	GRAMD4 (ENSPNAG00000020639)	ENSPNAG00000020490	KCNA1 (ENSPNAG00000020478)	tmem178ba (ENSPNAG00000020457)	CNOT4 (ENSPNAG00000020433)	zgc:136858 (ENSPNAG00000020362)	ENSPNAG00000005186	ENSPNAG00000020311	tnni4b.2 (ENSPNAG00000020281)	ENSPNAG00000020275	ENSPNAG00000020254	bpgm (ENSPNAG00000020232)	ENSPNAG00000020214	tnnt2d (ENSPNAG00000020179)
Mexicana tetra	MODERN SPECIES	16	ENSAMXG00000039144	PPIP5K1 (ENSAMXG00000013519)	ENSAMXG00000029484	cart2 (ENSAMXG00000032334)	zgc:193812 (ENSAMXG00000036518)	ENSAMXG00000009485	sh3gl3b (ENSAMXG00000009473)	nedd1 (ENSAMXG00000009459)	si:ch211-59o9.10 (ENSAMXG00000031339)	lyrm5b (ENSAMXG00000024910)	sycp3 (ENSAMXG00000009449)	actr6 (ENSAMXG00000009440)	ENSAMXG00000009428	atp2b1b (ENSAMXG00000009418)	zgc:171459 (ENSAMXG00000032912)	zgc:101783 (ENSAMXG00000033552) ##22	ENSAMXG00000009402	ENSAMXG00000009342	GRAMD4 (ENSAMXG00000034463)	ENSAMXG00000035147	ENSAMXG00000033288	KCNA1 (ENSAMXG00000024909)	CNOT4 (ENSAMXG00000001373)	tmem178ba (ENSAMXG00000001358)	zgc:136858 (ENSAMXG00000001386)	ENSAMXG00000001401	ENSAMXG00000001410	ENSAMXG00000041360	bpgm (ENSAMXG00000043597)	ENSAMXG00000001442	tnnt2d (ENSAMXG00000001452)
Electric eel	MODERN SPECIES	210	ENSEEEG00000020105	ENSEEEG00000020121	PPIP5K1 (ENSEEEG00000020153)	ENSEEEG00000021525	cart2 (ENSEEEG00000021530)	zgc:193812 (ENSEEEG00000021534)	ENSEEEG00000021536	sh3gl3b (ENSEEEG00000021537)	nedd1 (ENSEEEG00000021542)	si:ch211-59o9.10 (ENSEEEG00000021545)	sycp3 (ENSEEEG00000021546)	actr6 (ENSEEEG00000021556)	gtse1 (ENSEEEG00000021630)	ENSEEEG00000021632	zgc:171459 (ENSEEEG00000021636)	zgc:101783 (ENSEEEG00000021638) ##22	ENSEEEG00000021640	ENSEEEG00000021646	ENSEEEG00000021676	GRAMD4 (ENSEEEG00000021680)	ENSEEEG00000021741	KCNA1 (ENSEEEG00000021742)	tmem178ba (ENSEEEG00000021744)	CNOT4 (ENSEEEG00000021750)	zgc:136858 (ENSEEEG00000021808)	ENSEEEG00000021811	ENSEEEG00000021812	tnni4b.2 (ENSEEEG00000021817)	bpgm (ENSEEEG00000021875)	ENSEEEG00000021880	tnnt2d (ENSEEEG00000021889)
Cyprinoidei	ANCESTRAL SPECIES	53	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000157398.i.b	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00720000108833	ENSGT00940000154189.B	ENSGT00940000158686.d	ENSGT00640000091774.a.c.a	ENSGT00640000091774.a.c.b	ENSGT00940000164201.c.b.b.b	ENSGT00940000164201.c.b.a.e.a	ENSGT00940000164201.c.b.a.e.b.a	ENSGT00950000183004.a.b.b ##22	ENSGT00940000159839.d.b	ENSGT00390000010968.a	ENSGT00940000164299.b.b	ENSGT00940000158576.a.b	ENSGT00390000015299.a.b.b.a.e	ENSGT00390000000068.a.b	ENSGT00390000007427	ENSGT00940000165644.e	ENSGT01030000234588.b.b.b.a.a.b.a.b	ENSGT01030000234588.b.b.b.a.b	ENSGT01030000234588.b.b.b.a.a.b.a.a	ENSGT00950000182926.a	ENSGT00940000153901.a.a.a	ENSGT00940000154709.a.b.b.c	ENSGT00940000155504.j
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	152	ENSGT00940000159628.d.a	ENSGT00940000155971.d.a.b.g.b	ENSGT00390000009048.a.a.h.b	ENSGT00940000158701.b.a	ENSGT00390000018319.a.a.a.b.d.b.a.b	ENSGT00390000010463.b.d	ENSGT00940000157398.i.b.g	ENSGT00940000164439.h	ENSGT00940000158553.b.a.g	ENSGT00390000000062.l	ENSGT00720000108833.a	ENSGT00940000154189.B.a	ENSGT00940000158686.d.b	ENSGT00640000091774.a.c.a.a	ENSGT00640000091774.a.c.b.a	ENSGT00950000183004.a.b.b.a ##22	ENSGT00510000047522.d.a	ENSGT00940000159839.d.b.a	ENSGT00390000010968.a.a	ENSGT00940000164299.b.b	ENSGT00940000158576.a.b.e	ENSGT00390000015299.a.b.b.a.e.b	ENSGT00390000000068.a.b.b	ENSGT00390000007427.b	ENSGT01030000234588.b.b.b.a.a.b.b.n.b	ENSGT01030000234588.b.b.b.a.b	ENSGT01030000234588.b.b.b.a.a.b.a.a.a	ENSGT00950000182926.a.q	ENSGT00940000153901.a.a.a.a	ENSGT00940000154709.a.b.b.c.e	ENSGT00940000155504.j.b
Goldfish	MODERN SPECIES	45	hapln3 (ENSCARG00000029871)	ENSCARG00000029878	ENSCARG00000030183	cart2 (ENSCARG00000030201)	ENSCARG00000030210	sh3gl3b (ENSCARG00000030236)	nedd1 (ENSCARG00000030248)	ENSCARG00000030262	si:ch211-59o9.10 (ENSCARG00000030267)	sycp3 (ENSCARG00000030275)	actr6 (ENSCARG00000030303)	gtse1 (ENSCARG00000030510)	atp2b1b (ENSCARG00000030541)	zgc:171459 (ENSCARG00000030552)	zgc:113426 (ENSCARG00000030557)	zgc:101783 (ENSCARG00000030568) ##22	ENSCARG00000030579	ENSCARG00000030683	GRAMD4 (ENSCARG00000033635)	kcna6a (ENSCARG00000033980)	KCNA1 (ENSCARG00000033987)	tmem178ba (ENSCARG00000033995)	CNOT4 (ENSCARG00000034017)	ENSCARG00000034142	ENSCARG00000034162	tnni4b.2 (ENSCARG00000034173)	bpgm (ENSCARG00000034210)	ENSCARG00000034231	tnnt2d (ENSCARG00000034258)	DNM1L (ENSCARG00000034349)	dnajb9a (ENSCARG00000035528)
Cyprininae_a	ANCESTRAL SPECIES	46	ENSGT00390000009048.a.a.h.b	ENSGT00940000158701.b.a	ENSGT00390000018319.a.a.a.b.d.b.a.b	ENSGT00390000010463.b.d	ENSGT00940000157398.i.b.g	ENSGT00940000164439.h	ENSGT00390000001810.a	ENSGT00940000158553.b.a.g	ENSGT00390000000062.l	ENSGT00720000108833.a	ENSGT00940000154189.B.a	ENSGT00940000158686.d.b	ENSGT00640000091774.a.c.a.a	ENSGT00640000091774.a.c.b.a	ENSGT00940000164201.c.b.a.e.a.b	ENSGT00950000183004.a.b.b.a ##22	ENSGT00510000047522.d.a	ENSGT00940000159839.d.b.a	ENSGT00390000010968.a.a	ENSGT00940000164299.b.b	ENSGT00940000158576.a.b.e	ENSGT00390000015299.a.b.b.a.e.b	ENSGT00390000000068.a.b.b	ENSGT00390000007427.b	ENSGT01030000234588.b.b.b.a.a.b.b.n.b	ENSGT01030000234588.b.b.b.a.b	ENSGT01030000234588.b.b.b.a.a.b.a.a.a	ENSGT00950000182926.a.q	ENSGT00940000153901.a.a.a.a	ENSGT00940000154709.a.b.b.c.e	ENSGT00940000155504.j.b
Common carp reference	MODERN SPECIES	33	hapln3 (ENSCCRG00000056368)	ENSCCRG00000022233	ENSCCRG00000022225	ENSCCRG00000055594	cart2 (ENSCCRG00000015954)	ENSCCRG00000065466	sh3gl3b (ENSCCRG00000015937)	nedd1 (ENSCCRG00000015929)	ENSCCRG00000064001	si:ch211-59o9.10 (ENSCCRG00000015921)	actr6 (ENSCCRG00000015866)	atp2b1b (ENSCCRG00000015848)	zgc:113426 (ENSCCRG00000015835)	mxg (ENSCCRG00000045849)	ENSCCRG00000053451	zgc:101783 (ENSCCRG00000014583) ##22	ENSCCRG00000071231	ENSCCRG00000000912	ENSCCRG00000006960	ENSCCRG00000076127	ENSCCRG00000065772	ENSCCRG00000038814	zgc:136858 (ENSCCRG00000038816)	ENSCCRG00000038826	ENSCCRG00000072998	tnni4b.2 (ENSCCRG00000038842)	bpgm (ENSCCRG00000074369)	ENSCCRG00000079503	ENSCCRG00000059759	tnnt2d (ENSCCRG00000067690)	ENSCCRG00000038928
Golden-line barbel	MODERN SPECIES	30	PPIP5K1 (ENSSGRG00000050149)	ENSSGRG00000050144	cart2 (ENSSGRG00000050131)	ENSSGRG00000050126	nedd1 (ENSSGRG00000050122)	nedd1 (ENSSGRG00000050120)	lyrm5b (ENSSGRG00000050119)	si:ch211-59o9.10 (ENSSGRG00000050118)	sycp3 (ENSSGRG00000050117)	actr6 (ENSSGRG00000050041)	gtse1 (ENSSGRG00000050039)	atp2b1b (ENSSGRG00000050038)	zgc:171459 (ENSSGRG00000050037)	zgc:113426 (ENSSGRG00000050035)	mxg (ENSSGRG00000049977)	zgc:101783 (ENSSGRG00000049975) ##22	ENSSGRG00000049974	ENSSGRG00000049973	GRAMD4 (ENSSGRG00000049972)	kcna6a (ENSSGRG00000049971)	KCNA1 (ENSSGRG00000049969)	tmem178ba (ENSSGRG00000049967)	CNOT4 (ENSSGRG00000049881)	zgc:136858 (ENSSGRG00000049879)	ENSSGRG00000049878	tnni4b.2 (ENSSGRG00000049876)	ENSSGRG00000049833	ENSSGRG00000049830	bpgm (ENSSGRG00000049828)	tnnt2d (ENSSGRG00000049789)	DNM1L (ENSSGRG00000049324)
Cyprininae	ANCESTRAL SPECIES	197	ENSGT00940000164795	ENSGT00390000010463.b.c	ENSGT00940000157398.i.b.h	ENSGT00940000164439.g	ENSGT00390000001810.a	ENSGT00940000158553.b.a.h	ENSGT00390000000062.k	ENSGT00720000108833.b	ENSGT00940000154189.B.b	ENSGT00940000158686.d.a	ENSGT00640000091774.a.c.a.b	ENSGT00640000091774.a.c.b.b	ENSGT00940000164201.c.b.b.b	ENSGT00940000164201.c.b.a.e.a	ENSGT00940000164201.c.b.a.e.b.a	ENSGT00950000183004.a.b.b.b ##22	ENSGT00510000047522.d.b	ENSGT00940000159839.d.b.b	ENSGT00390000010968.a.b	ENSGT00940000158576.b	ENSGT00940000158576.a.b.f	ENSGT00390000015299.a.b.b.a.e.a	ENSGT00390000000068.a.b.a	ENSGT00390000007427.a	ENSGT00940000165644.e	ENSGT01030000234588.b.b.b.a.a.b.b.n.a	ENSGT01030000234588.b.b.b.a.a.b.a.a.b	ENSGT00950000182926.a.r	ENSGT00940000153901.a.a.a.b	ENSGT00940000154709.a.b.b.c.f	ENSGT00940000155504.j.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	17	si:ch211-59o9.10 (ENSCARG00000012657)	sycp3 (ENSCARG00000012665)	actr6 (ENSCARG00000012688)	gtse1 (ENSCARG00000012672)	atp2b1b (ENSCARG00000012709)	zgc:171459 (ENSCARG00000012728)	zgc:113426 (ENSCARG00000012738)	ENSCARG00000012756	ENSCARG00000012786	ENSCARG00000012807	ENSCARG00000012829	ENSCARG00000012834	ENSCARG00000012847	ENSCARG00000012852	ENSCARG00000012871	zgc:101783 (ENSCARG00000012876) ##22	ENSCARG00000012881	ENSCARG00000012918	GRAMD4 (ENSCARG00000013383)	KCNA1 (ENSCARG00000013602)	tmem178ba (ENSCARG00000013604)	CNOT4 (ENSCARG00000013610)	zgc:136858 (ENSCARG00000013641)	ENSCARG00000013671	bpgm (ENSCARG00000013697)	ENSCARG00000013709	tnnt2d (ENSCARG00000013727)	DNM1L (ENSCARG00000013834)	dnajb9a (ENSCARG00000016226)	ENSCARG00000016236	kctd15a (ENSCARG00000016261)
Goldfish	MODERN SPECIES	3093															ENSCARG00000064439	zgc:101783 (ENSCARG00000064420) ##22	ENSCARG00000064372
Cyprininae_a	ANCESTRAL SPECIES	16	ENSGT00390000010463.b.c	ENSGT00940000157398.i.b.h	ENSGT00940000164439.g	ENSGT00940000158553.b.a.h	ENSGT00390000000062.k	ENSGT00720000108833.b	ENSGT00940000154189.B.b	ENSGT00940000158686.d.a	ENSGT00640000091774.a.c.a.b	ENSGT00640000091774.a.c.b.b	ENSGT00940000164201.c.b.b.b	ENSGT00940000164201.c.b.a.e.a.a	ENSGT00940000164201.c.b.a.e.b.a	ENSGT00940000164201.c.b.a.e.b.b.a.a	ENSGT00940000161814.g.a.d.d.b	ENSGT00950000183004.a.b.b.b ##22	ENSGT00510000047522.d.b	ENSGT00940000159839.d.b.b	ENSGT00390000010968.a.b	ENSGT00940000158576.b	ENSGT00940000158576.a.b.f	ENSGT00390000015299.a.b.b.a.e.a	ENSGT00390000000068.a.b.a	ENSGT00390000007427.a	ENSGT00940000165644.e	ENSGT01030000234588.b.b.b.a.a.b.b.n.a	ENSGT01030000234588.b.b.b.a.a.b.a.a.b	ENSGT00950000182926.a.r	ENSGT00940000153901.a.a.a.b	ENSGT00940000154709.a.b.b.c.f	ENSGT00940000155504.j.a
Golden-line barbel	MODERN SPECIES	132	zgc:193812 (ENSSGRG00000027932)	ENSSGRG00000027929	sh3gl3b (ENSSGRG00000027889)	nedd1 (ENSSGRG00000027888)	sycp3 (ENSSGRG00000027885)	actr6 (ENSSGRG00000027674)	atp2b1b (ENSSGRG00000027010)	zgc:171459 (ENSSGRG00000026995)	zgc:113426 (ENSSGRG00000026994)	ENSSGRG00000026889	ENSSGRG00000026887	ENSSGRG00000026886	ENSSGRG00000026885	ENSSGRG00000026869	ENSSGRG00000026868	zgc:101783 (ENSSGRG00000026865) ##22	ENSSGRG00000026864	ENSSGRG00000026862	ENSSGRG00000026860	ENSSGRG00000026858	kcna6a (ENSSGRG00000026857)	KCNA1 (ENSSGRG00000026856)	CNOT4 (ENSSGRG00000026568)	zgc:136858 (ENSSGRG00000026564)	ENSSGRG00000026562	ENSSGRG00000026556	ENSSGRG00000026554	bpgm (ENSSGRG00000026553)	ENSSGRG00000026549	tnnt2d (ENSSGRG00000026548)	DNM1L (ENSSGRG00000026381)
Zebrafish	MODERN SPECIES	17	ENSDARG00000062781	zgc:193812 (ENSDARG00000097310)	sh3gl3b (ENSDARG00000007302)	nedd1 (ENSDARG00000013472)	lyrm5b (ENSDARG00000045827)	si:ch211-59o9.10 (ENSDARG00000089967)	sycp3 (ENSDARG00000013438)	actr6 (ENSDARG00000021370)	gtse1 (ENSDARG00000013719)	atp2b1b (ENSDARG00000007788)	zgc:171459 (ENSDARG00000077248)	zgc:113426 (ENSDARG00000051793)	ENSDARG00000051795	mxg (ENSDARG00000008019)	ENSDARG00000023369	zgc:101783 (ENSDARG00000045824) ##22	ENSDARG00000058259	GRAMD4 (ENSDARG00000045506)	kcna6a (ENSDARG00000046014)	KCNA1 (ENSDARG00000062942)	tmem178ba (ENSDARG00000004577)	CNOT4 (ENSDARG00000007045)	zgc:136858 (ENSDARG00000070830)	ENSDARG00000092999	tnni4b.2 (ENSDARG00000036671)	bpgm (ENSDARG00000070826)	ENSDARG00000086391	tnnt2d (ENSDARG00000002988)	dnm1l (ENSDARG00000015006)	dnajb9a (ENSDARG00000052072)	ENSDARG00000075805
Clupeiformes	ANCESTRAL SPECIES	87	ENSGT00940000157869.e.b	ENSGT00940000155306.a	ENSGT00940000157928	ENSGT00940000156494	ENSGT00620000089227	ENSGT00390000004860	ENSGT00940000157238.a	ENSGT00940000160986	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053	ENSGT00950000182952.C.h	ENSGT00950000183004.a.b.a.a #22	ENSGT01030000234563.a.a.c.a	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT01070000253775.a.d.a.a.a.a	ENSGT00950000183017.b.b.a.a	ENSGT00390000013715	ENSGT00990000207548	ENSGT00940000156720	ENSGT00950000182973.a.c.b	ENSGT00940000158466	ENSGT00940000154003.A	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.b	ENSGT01050000244850.A.a.o.b
Atlantic herring	MODERN SPECIES	19	ENSCHAG00000001832	zgc:136858 (ENSCHAG00000001892)	ENSCHAG00000002049	ENSCHAG00000002073	CNOT4 (ENSCHAG00000002097)	tmem178ba (ENSCHAG00000002185)	KCNA1 (ENSCHAG00000002201)	ENSCHAG00000002221	GRAMD4 (ENSCHAG00000002310)	ENSCHAG00000004490	gtse1 (ENSCHAG00000006220)	atp2b1b (ENSCHAG00000006419)	ENSCHAG00000012164	ruvbl2 (ENSCHAG00000012194)	faxdc2 (ENSCHAG00000012360)	zgc:101783 (ENSCHAG00000012388) ##22	cbll1 (ENSCHAG00000012461)	actr6 (ENSCHAG00000012469)	sycp3 (ENSCHAG00000012593)	si:ch211-59o9.10 (ENSCHAG00000012601)	lyrm5b (ENSCHAG00000012612)	nedd1 (ENSCHAG00000012636)	sh3gl3b (ENSCHAG00000012714)	ENSCHAG00000012739	ENSCHAG00000012775	zgc:193812 (ENSCHAG00000012792)	cart2 (ENSCHAG00000012801)	ENSCHAG00000012830	PPIP5K1 (ENSCHAG00000012889)	ENSCHAG00000013341	hapln3 (ENSCHAG00000013424)
Euteleosteomorpha	ANCESTRAL SPECIES	284														ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00940000157398.i.b	ENSGT00390000010463.b	ENSGT00940000164795	ENSGT00530000063834.f	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b
Protacanthopterygii	ANCESTRAL SPECIES	171											ENSGT00950000182844.b.b.b.a.b	ENSGT00940000158940.b	ENSGT00940000153567.a.a.b.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00950000183117.a.b.b	ENSGT00940000153544.a.i.a	ENSGT00390000007975.b.a	ENSGT00940000158289.a.a	ENSGT00940000163864	ENSGT00950000183017.b.b.a.b.b	ENSGT00940000156676.c	ENSGT00940000158553.b.a	ENSGT00390000001810.b.b	ENSGT00940000164439	ENSGT00940000157398.i.b	ENSGT00390000010463.b
Salmoninae	ANCESTRAL SPECIES	120	ENSGT00940000161014.l	ENSGT00950000182839.B.a.a.l.f	ENSGT00940000155871.h.a	ENSGT00940000155871.g	ENSGT00530000065415.h	ENSGT00390000011116.c	ENSGT00940000155200	ENSGT00390000001368.l	ENSGT00390000005855	ENSGT00390000000453.j	ENSGT00950000182844.b.b.b.a.b.e	ENSGT00940000153567.a.a.b.a.a.a	ENSGT00640000091774.a.a.b	ENSGT00640000091774.a.b.h	ENSGT00640000091774.a.b.g.b	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522.n	ENSGT00720000108833	ENSGT00390000000062	ENSGT00950000183117.a.b.b.f	ENSGT00940000153544.a.i.a.d	ENSGT00940000158289.a.a.e.a.b	ENSGT00390000012918.c.h	ENSGT00940000155197.b	ENSGT00940000164439.b	ENSGT00940000157398.i.b	ENSGT00390000010463.b	ENSGT00940000155628.cb.b.a	ENSGT00510000048252.t	ENSGT00940000161555	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b
Huchen	MODERN SPECIES	557													ENSHHUG00000020504	ENSHHUG00000020493	ENSHHUG00000020492	zgc:101783 (ENSHHUG00000020469) ##22	ENSHHUG00000020457	actr6 (ENSHHUG00000020432)	sycp3 (ENSHHUG00000020415)	si:ch211-59o9.10 (ENSHHUG00000020402)	ENSHHUG00000020397	mfsd11 (ENSHHUG00000020390)	strap (ENSHHUG00000020372)	nedd1 (ENSHHUG00000020367)	sh3gl3b (ENSHHUG00000020359)	ENSHHUG00000020340	ENSHHUG00000020331	ENSHHUG00000020326	ENSHHUG00000020233	ENSHHUG00000019732	PCLAF (ENSHHUG00000019721)
Salmoninae_a	ANCESTRAL SPECIES	13	ENSGT00390000007747.e	ENSGT00940000161014.l	ENSGT00950000182839.B.a.a.l.f	ENSGT00940000155871.h.a	ENSGT00530000065415.h	ENSGT00390000011116.c	ENSGT00940000155200	ENSGT00390000001368.l	ENSGT00390000005855	ENSGT00390000000453.j	ENSGT00950000182844.b.b.b.a.b.e	ENSGT00940000153567.a.a.b.a.a.a	ENSGT00640000091774.a.a.b	ENSGT00640000091774.a.b.h	ENSGT00640000091774.a.b.g.b	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522.n	ENSGT00720000108833	ENSGT00390000000062.h	ENSGT00390000012918.c.h	ENSGT00940000164439.b	ENSGT00940000157398.i.b	ENSGT00390000010463.b	ENSGT00960000190193	ENSGT00530000063834.f	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000155628.cb.b.a	ENSGT00510000048252.t	ENSGT00940000161555	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00390000007747.e	ENSGT00940000161014.l	ENSGT00950000182839.B.a.a.l.f	ENSGT00940000155871.h.a	ENSGT00530000065415.h	ENSGT00390000011116.c	ENSGT00940000155200	ENSGT00390000001368.l	ENSGT00390000005855	ENSGT00390000000453.j	ENSGT00950000182844.b.b.b.a.b.e	ENSGT00940000153567.a.a.b.a.a.a	ENSGT00640000091774.a.a.b	ENSGT00640000091774.a.b.h	ENSGT00640000091774.a.b.g.b	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522.n	ENSGT00720000108833	ENSGT00390000000062.h	ENSGT00390000012918.c.h	ENSGT00940000164439.b	ENSGT00940000157398.i.b	ENSGT00390000010463.b	ENSGT00960000190193	ENSGT00530000063834.f	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000155628.cb.b.a	ENSGT00510000048252.t	ENSGT00940000161555	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00390000007747.e	ENSGT00940000161014.l	ENSGT00950000182839.B.a.a.l.f	ENSGT00940000155871.h.a	ENSGT00530000065415.h	ENSGT00390000011116.c	ENSGT00940000155200	ENSGT00390000001368.l	ENSGT00390000005855	ENSGT00390000000453.j	ENSGT00950000182844.b.b.b.a.b.e	ENSGT00940000153567.a.a.b.a.a.a	ENSGT00640000091774.a.a.b	ENSGT00640000091774.a.b.h	ENSGT00640000091774.a.b.g.b	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522.n	ENSGT00720000108833	ENSGT00390000000062.h	ENSGT00390000012918.c.h	ENSGT00940000164439.b	ENSGT00940000157398.i.b	ENSGT00390000010463.b	ENSGT00960000190193	ENSGT00530000063834.f	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000155628.cb.b.a	ENSGT00510000048252.t	ENSGT00940000161555	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b
Chinook salmon	MODERN SPECIES	10	sspn (ENSOTSG00005035489)	bhlhe41 (ENSOTSG00005035488)	RASSF8 (ENSOTSG00005035486)	ENSOTSG00005035433	ENSOTSG00005035421	ENSOTSG00005035410	banp (ENSOTSG00005035406)	ENSOTSG00005035392	FBXO31 (ENSOTSG00005034959)	fanci (ENSOTSG00005034930)	RHCG (ENSOTSG00005034658)	ENSOTSG00005034655	ENSOTSG00005034652	ENSOTSG00005034649	ENSOTSG00005034648	zgc:101783 (ENSOTSG00005034645) ##22	ENSOTSG00005034642	actr6 (ENSOTSG00005034621)	ARL1 (ENSOTSG00005034620)	sycp3 (ENSOTSG00005034618)	mfsd11 (ENSOTSG00005034617)	nedd1 (ENSOTSG00005034616)	ENSOTSG00005034615	ENSOTSG00005034613	ENSOTSG00005034610	ENSOTSG00005034609	ENSOTSG00005034601	CSNK1G1 (ENSOTSG00005034454)	PCLAF (ENSOTSG00005034449)	ENSOTSG00005034446	ENSOTSG00005034442
Coho salmon	MODERN SPECIES	14	sspn (ENSOKIG00005043695)	bhlhe41 (ENSOKIG00005043674)	RASSF8 (ENSOKIG00005043659)	kras (ENSOKIG00005043614)	ENSOKIG00005043596	banp (ENSOKIG00005043581)	ENSOKIG00005043524	FBXO31 (ENSOKIG00005043118)	fanci (ENSOKIG00005042080)	ENSOKIG00005041954	RHCG (ENSOKIG00005041654)	ENSOKIG00005041524	ENSOKIG00005041495	ENSOKIG00005041467	ENSOKIG00005041414	zgc:101783 (ENSOKIG00005041383) ##22	ENSOKIG00005041357	actr6 (ENSOKIG00005041197)	ARL1 (ENSOKIG00005041145)	sycp3 (ENSOKIG00005041088)	MFSD11 (ENSOKIG00005041082)	nedd1 (ENSOKIG00005041053)	sh3gl3b (ENSOKIG00005041041)	ENSOKIG00005041032	ENSOKIG00005040998	ENSOKIG00005040982	ENSOKIG00005040948	ENSOKIG00005040825	ENSOKIG00005040540	PCLAF (ENSOKIG00005040501)	ENSOKIG00005040220
Rainbow trout	MODERN SPECIES	11	ITPR2 (ENSOMYG00000009829)	sspn (ENSOMYG00000006270)	bhlhe41 (ENSOMYG00000006233)	RASSF8 (ENSOMYG00000006199)	kras (ENSOMYG00000006134)	ENSOMYG00000006027	banp (ENSOMYG00000005977)	ENSOMYG00000005891	ENSOMYG00000005746	ENSOMYG00000005210	rhcg1-b (ENSOMYG00000004443)	ENSOMYG00000003987	ENSOMYG00000003900	ENSOMYG00000003883	ENSOMYG00000003866	ENSOMYG00000003837 ##22	ENSOMYG00000003779	actr6 (ENSOMYG00000003691)	sycp3 (ENSOMYG00000003523)	ENSOMYG00000003467	ENSOMYG00000048053	nedd1 (ENSOMYG00000003390)	ENSOMYG00000070283	ENSOMYG00000003231	ENSOMYG00000003149	ENSOMYG00000003121	ENSOMYG00000003090	ENSOMYG00000002961	ENSOMYG00000002752	ENSOMYG00000002714	ENSOMYG00000002562
Salmo	ANCESTRAL SPECIES	9	ENSGT00510000046843.b.f	ENSGT00940000156039.t.a	ENSGT00940000161014.l	ENSGT00950000182839.B.a.a.l.f	ENSGT00940000155871.h.a	ENSGT00530000065415.h	ENSGT00390000011116.c	ENSGT00940000155200.sb.a	ENSGT00390000001368.l	ENSGT00390000005855	ENSGT00390000000453.j	ENSGT00950000182844.b.b.b.a.b.e	ENSGT00940000153567.a.a.b.a.a.a	ENSGT00640000091774.a.a.b	ENSGT00640000091774.a.b.g.b	ENSGT00950000183004.a.b.b ##22	ENSGT00510000047522.n	ENSGT00720000108833	ENSGT00390000000062.h	ENSGT00390000012918.c.h	ENSGT00940000164439.b	ENSGT00390000010463.b	ENSGT00960000190193	ENSGT00990000211920	ENSGT00530000063834.f	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000006548.a.b.b	ENSGT00940000155628.cb.b.a	ENSGT00510000048252.t	ENSGT00940000161555	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b
Atlantic salmon	MODERN SPECIES	1	plekhg7 (ENSSSAG00000053006)	ITPR2 (ENSSSAG00000043713)	bhlh3 (ENSSSAG00000043542)	RASSF8 (ENSSSAG00000043531)	rask (ENSSSAG00000099686)	ENSSSAG00000043478	banp (ENSSSAG00000043342)	ENSSSAG00000099589	ENSSSAG00000043186	ENSSSAG00000042460	ENSSSAG00000029761	ENSSSAG00000018622	ENSSSAG00000017038	ENSSSAG00000016871	ENSSSAG00000067677	FAM3C (ENSSSAG00000016498) ##22	ENSSSAG00000091451	ENSSSAG00000015931	ENSSSAG00000113855	sycp3 (ENSSSAG00000087032)	ENSSSAG00000015833	ENSSSAG00000015814	nedd1 (ENSSSAG00000015613)	ENSSSAG00000015519	ENSSSAG00000015566	ENSSSAG00000015496	ENSSSAG00000015484	ENSSSAG00000015472	rs17 (ENSSSAG00000015449)	ENSSSAG00000090042	ENSSSAG00000009474
River trout	MODERN SPECIES	37	ITPR2 (ENSSTUG00000004225)	bhlhe41 (ENSSTUG00000004136)	RASSF8 (ENSSTUG00000004102)	kras (ENSSTUG00000004056)	ENSSTUG00000004049	ENSSTUG00000004016	banp (ENSSTUG00000003968)	ENSSTUG00000003851	FBXO31 (ENSSTUG00000003303)	fanci (ENSSTUG00000002112)	ENSSTUG00000001929	RHCG (ENSSTUG00000001652)	ENSSTUG00000001577	ENSSTUG00000001574	ENSSTUG00000001560	zgc:101783 (ENSSTUG00000001531) ##22	ENSSTUG00000001512	actr6 (ENSSTUG00000001441)	sycp3 (ENSSTUG00000001397)	mfsd11 (ENSSTUG00000001391)	nedd1 (ENSSTUG00000001361)	ENSSTUG00000001354	ENSSTUG00000001313	ENSSTUG00000001290	ENSSTUG00000001271	ENSSTUG00000001263	ENSSTUG00000001242	ENSSTUG00000001164	PCLAF (ENSSTUG00000001118)	ENSSTUG00000001094	ENSSTUG00000010401
Northern pike	MODERN SPECIES	18	RASSF8 (ENSELUG00000003044)	kras (ENSELUG00000003058)	ENSELUG00000003066	ENSELUG00000028248	banp (ENSELUG00000003078)	ENSELUG00000003142	FBXO31 (ENSELUG00000003171)	ENSELUG00000000104	fanci (ENSELUG00000003277)	POLG (ENSELUG00000003339)	RHCG (ENSELUG00000003374)	ENSELUG00000034411	ENSELUG00000003412	ENSELUG00000003424	ENSELUG00000003438	ENSELUG00000003467 ##22	actr6 (ENSELUG00000003514)	sycp3 (ENSELUG00000003569)	arl1 (ENSELUG00000001287)	si:ch211-59o9.10 (ENSELUG00000003601)	strap (ENSELUG00000003627)	nedd1 (ENSELUG00000003698)	ENSELUG00000003737	zgc:193812 (ENSELUG00000003754)	ENSELUG00000003761	zgc:114188 (ENSELUG00000003785)	ENSELUG00000003842	PCLAF (ENSELUG00000003869)	tmem17 (ENSELUG00000003898)	agbl2 (ENSELUG00000003925)	ENSELUG00000003939
Acanthomorphata	ANCESTRAL SPECIES	217					ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00940000157398.i.b
Euacanthomorphacea	ANCESTRAL SPECIES	39	ENSGT00940000160204	ENSGT00390000009212	ENSGT00530000063759.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00940000157398.i.b	ENSGT01010000229167
Percomorphaceae	ANCESTRAL SPECIES	31	ENSGT00390000009212	ENSGT00530000063759.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00990000204734	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT01010000229167	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00940000159483.a.a	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a
Atherinomorphae	ANCESTRAL SPECIES	44	ENSGT00940000159483.a.a	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a.b	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a.b	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22
Aplocheiloidei	ANCESTRAL SPECIES	97	ENSGT00940000158553.b.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00950000183202.a.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00940000159100.h	ENSGT00390000011620.b.e	ENSGT00940000154415.lb.b	ENSGT00390000000707.y.a	ENSGT00390000009212	ENSGT00530000063759.a
Mangrove rivulus	MODERN SPECIES	724												ENSKMAG00000007074	ENSKMAG00000007043	ENSKMAG00000007024	ENSKMAG00000007001	ENSKMAG00000006982 ##22	CHST8 (ENSKMAG00000006945)	ENSKMAG00000006890	lsm14aa (ENSKMAG00000006797)
Turquoise killifish	MODERN SPECIES	1622	RBL2 (ENSNFUG00015022104)	ENSNFUG00015022089	ENSNFUG00015022079	RPGRIP1L (ENSNFUG00015022052)	NOX5 (ENSNFUG00015022021)	ambra1b (ENSNFUG00015021989)	MDKB (ENSNFUG00015021966)	ENSNFUG00015021962	ENSNFUG00015021960	CU181898.3 (ENSNFUG00015021766)	ENSNFUG00015021729	PHF21A (ENSNFUG00015021710)	ENSNFUG00015021703	KCNJ11L (ENSNFUG00015021694)	ENSNFUG00015021688	ENSNFUG00015021661 ##22	ENSNFUG00015021656	ENSNFUG00015021652	GPI (ENSNFUG00015021157)	MPHOSPH6 (ENSNFUG00015021146)	SNX20 (ENSNFUG00015021144)	ZFC3H1 (ENSNFUG00015021134)	TBC1D15 (ENSNFUG00015017940)	tph2 (ENSNFUG00015017768)	PTPRB (ENSNFUG00015017466)	FRS2B (ENSNFUG00015017412)	NUP160 (ENSNFUG00015017051)	ENSNFUG00015017016	ENSNFUG00015013240	LAMB1 (ENSNFUG00015007776)	ENSNFUG00015006851
Cyprinodontoidei	ANCESTRAL SPECIES	47	ENSGT00720000108833	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a.b	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00390000002251	ENSGT00720000108833	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT01100000263483.E.a.c.b.b.c.a.a.b.b	ENSGT01100000263483.E.a.c.b.b.c.a.a.a	ENSGT01100000263483.F.a	ENSGT01100000263483.E.a.c.b.b.d	ENSGT00390000001116	ENSGT00940000156429	ENSGT00950000182885.A.b	ENSGT00940000159100.h	ENSGT00940000178960	ENSGT00530000063759.a	ENSGT00390000009212	ENSGT00390000000707.y.a	ENSGT00940000154415.lb.b	ENSGT00390000011620.b.e	ENSGT00940000159496.l
Poecilia	ANCESTRAL SPECIES	39	ENSGT00390000002251	ENSGT00720000108833	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT01100000263483.E.a.c.b.b.c.a.a.b.b	ENSGT01100000263483.E.a.c.b.b.c.a.a.a	ENSGT01100000263483.F.a	ENSGT01100000263483.E.a.c.b.b.c.a.b
NAME_6	ANCESTRAL SPECIES	29	ENSGT00390000002251	ENSGT00720000108833	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT01100000263483.E.a.c.b.b.c.a.a.b.b	ENSGT01100000263483.E.a.c.b.b.c.a.a.b.a.b.b	ENSGT01100000263483.E.a.c.b.b.c.a.a.a	ENSGT01100000263483.F.a	ENSGT01100000263483.E.a.c.b.b.c.a.b
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	459	actr6 (ENSPFOG00000013412)	ENSPFOG00000013187	IRX5 (ENSPFOG00000013162)	ENSPFOG00000023663	rpgrip1l (ENSPFOG00000013083)	NOX5 (ENSPFOG00000012976)	ambra1b (ENSPFOG00000012748)	ENSPFOG00000012741	mdkb (ENSPFOG00000012737)	DGKZ (ENSPFOG00000012412)	PHF21A (ENSPFOG00000012323)	PRDM11 (ENSPFOG00000012305)	ENSPFOG00000012303	ENSPFOG00000012265	ENSPFOG00000012260	ENSPFOG00000012188 ##22
Amazon molly	MODERN SPECIES	1134																ENSPFOG00000000688 ##22	ENSPFOG00000020120	ENSPFOG00000022684	ENSPFOG00000023365	ENSPFOG00000000735	ENSPFOG00000023369
Sailfin molly	MODERN SPECIES	2206										ENSPLAG00000006500	ENSPLAG00000006512	PRDM11 (ENSPLAG00000000662)	ENSPLAG00000006533	ENSPLAG00000006556	ENSPLAG00000006568	ENSPLAG00000006624 ##22
Guppy	MODERN SPECIES	458	FCSK (ENSPREG00000020331)	actr6 (ENSPREG00000020359)	RBL2 (ENSPREG00000020409)	IRX5 (ENSPREG00000020584)	rpgrip1l (ENSPREG00000020613)	NOX5 (ENSPREG00000020638)	ambra1b (ENSPREG00000020660)	ENSPREG00000020699	mdkb (ENSPREG00000020797)	DGKZ (ENSPREG00000020808)	PHF21A (ENSPREG00000020836)	PRDM11 (ENSPREG00000020891)	ENSPREG00000020901	ENSPREG00000020907	ENSPREG00000020917	ENSPREG00000020927 ##22	chmp1a (ENSPREG00000020973)	slc10a3 (ENSPREG00000020981)	ENSPREG00000020993	znf276 (ENSPREG00000021015)	vps9d1 (ENSPREG00000021032)	ENSPREG00000021047	ENSPREG00000021062	pdf (ENSPREG00000021070)	ENSPREG00000021075	tat (ENSPREG00000000553)	zgc:56622 (ENSPREG00000000605)	klhl36 (ENSPREG00000000664)	cotl1 (ENSPREG00000000672)	meak7 (ENSPREG00000000709)	plcg2 (ENSPREG00000000819)
Platyfish	MODERN SPECIES	11	ENSXMAG00000022305	actr6 (ENSXMAG00000009452)	RBL2 (ENSXMAG00000004674)	IRX5 (ENSXMAG00000018551)	rpgrip1l (ENSXMAG00000006728)	NOX5 (ENSXMAG00000006758)	ambra1b (ENSXMAG00000006779)	ENSXMAG00000022606	mdkb (ENSXMAG00000006797)	DGKZ (ENSXMAG00000006803)	PHF21A (ENSXMAG00000006871)	PRDM11 (ENSXMAG00000006891)	ENSXMAG00000006895	ENSXMAG00000006897	ENSXMAG00000027525	ENSXMAG00000022198 ##22	ENSXMAG00000025922	ENSXMAG00000023591	ENSXMAG00000021690	ENSXMAG00000027763	ENSXMAG00000006930	ENSXMAG00000022832	ENSXMAG00000026760	ENSXMAG00000006931	ENSXMAG00000006932	ENSXMAG00000006933	tbc1d15 (ENSXMAG00000006966)	ENSXMAG00000024795	tph2 (ENSXMAG00000026324)	CHST8 (ENSXMAG00000007050)	ENSXMAG00000025358
NAME_4	ANCESTRAL SPECIES	30	ENSGT00950000183202.a.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a.b	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT01100000263483.E.a.c.b.b	ENSGT00390000001116	ENSGT00940000156429	ENSGT00950000182885.A.b	ENSGT00940000154318.A.b	ENSGT00530000063759.a	ENSGT00390000009212	ENSGT00390000000707.y.a	ENSGT00940000154415.lb.b	ENSGT00390000011620.b.e	ENSGT00940000159496.l	ENSGT00940000159100.h	ENSGT00940000156088.c.b	ENSGT00940000157033.h	ENSGT00390000000972
Mummichog	MODERN SPECIES	2241	actr6 (ENSFHEG00000018617)	RBL2 (ENSFHEG00000018632)	IRX5 (ENSFHEG00000018641)	rpgrip1l (ENSFHEG00000000487)	NOX5 (ENSFHEG00000018900)	ambra1b (ENSFHEG00000018969)	ENSFHEG00000018976	mdkb (ENSFHEG00000019005)	DGKZ (ENSFHEG00000019036)	PHF21A (ENSFHEG00000019123)	ENSFHEG00000019138	PRDM11 (ENSFHEG00000019163)	ENSFHEG00000019167	ENSFHEG00000019186	ENSFHEG00000019213	ENSFHEG00000019244 ##22	ENSFHEG00000019279	tbc1d15 (ENSFHEG00000019311)	tph2 (ENSFHEG00000019344)	ENSFHEG00000019352	SNX20 (ENSFHEG00000019358)	mphosph6 (ENSFHEG00000019377)	gpia (ENSFHEG00000019417)	lsm14aa (ENSFHEG00000019482)	ENSFHEG00000019573	KCTD15 (ENSFHEG00000019589)	CHST8 (ENSFHEG00000019601)	ENSFHEG00000019616	PTPRB (ENSFHEG00000019688)	frs2b (ENSFHEG00000019727)	nup160 (ENSFHEG00000019843)
Sheepshead minnow	MODERN SPECIES	1557											PRDM11 (ENSCVAG00000014953)	ENSCVAG00000014879	ENSCVAG00000014870	ENSCVAG00000014861	ENSCVAG00000014849	ENSCVAG00000014817 ##22
Oryzias	ANCESTRAL SPECIES	35	ENSGT01050000246145	ENSGT00530000064134.a.a	ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000174623	ENSGT00390000006218	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00730000111190	ENSGT01050000246145	ENSGT00530000064134.a.a	ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b.c.a	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439.e	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000006218	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b
Japanese Medaka HdrR	MODERN SPECIES	20	zc3h18 (ENSORLG00000014056)	il17c (ENSORLG00000023466)	ENSORLG00000029430	ENSORLG00000028664	ENSORLG00000028919	rpgrip1l (ENSORLG00000014081)	NOX5 (ENSORLG00000014089)	ambra1b (ENSORLG00000014123)	ENSORLG00000014138	mdkb (ENSORLG00000014169)	DGKZ (ENSORLG00000014238)	PHF21A (ENSORLG00000014276)	ENSORLG00000025402	ENSORLG00000014293	ENSORLG00000027002	ENSORLG00000027832 ##22	actr6 (ENSORLG00000014326)	FCSK (ENSORLG00000014336)	PCLAF (ENSORLG00000014346)	nedd1 (ENSORLG00000014380)	lyrm5b (ENSORLG00000014387)	si:ch211-59o9.10 (ENSORLG00000014392)	commd9 (ENSORLG00000014404)	zgc:114188 (ENSORLG00000026689)	cart2 (ENSORLG00000014424)	cstpp1 (ENSORLG00000014436)	ckap5 (ENSORLG00000014504)	ENSORLG00000023774	dnaaf4 (ENSORLG00000014547)	anpepb.1 (ENSORLG00000014593)	ENSORLG00000014604
Chinese medaka	MODERN SPECIES	421	ENSOSIG00000017846	ENSOSIG00000017842	ENSOSIG00000017836	IRX5 (ENSOSIG00000017828)	ENSOSIG00000017823	rpgrip1l (ENSOSIG00000017818)	NOX5 (ENSOSIG00000017810)	ambra1b (ENSOSIG00000017804)	ENSOSIG00000017797	mdkb (ENSOSIG00000017795)	DGKZ (ENSOSIG00000017792)	PHF21A (ENSOSIG00000017627)	ENSOSIG00000017622	ENSOSIG00000017621	ENSOSIG00000017620	ENSOSIG00000017605 ##22	actr6 (ENSOSIG00000017599)	FCSK (ENSOSIG00000017425)	ENSOSIG00000017390	nedd1 (ENSOSIG00000017358)	ENSOSIG00000017348	commd9 (ENSOSIG00000017347)	zgc:114188 (ENSOSIG00000017344)	cart3 (ENSOSIG00000017343)	cstpp1 (ENSOSIG00000017341)	ckap5 (ENSOSIG00000015708)	ENSOSIG00000014817
Oryzias_b	ANCESTRAL SPECIES		ENSGT01050000246145	ENSGT00530000064134.a.a	ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000174623	ENSGT00390000006218	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000012935	ENSGT00390000014757	ENSGT00950000183093.B.a.a	ENSGT00390000004930	ENSGT00940000154876.a.b.a	ENSGT00940000154876.a.b.b
Javanese ricefish	MODERN SPECIES	20	trhr2 (ENSOJAG00000011348)	zc3h18 (ENSOJAG00000011374)	ENSOJAG00000011391	ENSOJAG00000011401	ENSOJAG00000011414	IRX5 (ENSOJAG00000011451)	rpgrip1l (ENSOJAG00000011523)	ambra1b (ENSOJAG00000011582)	ENSOJAG00000011627	mdkb (ENSOJAG00000011708)	DGKZ (ENSOJAG00000011775)	PHF21A (ENSOJAG00000013172)	ENSOJAG00000013258	ENSOJAG00000013267	ENSOJAG00000013281	ENSOJAG00000013325 ##22	actr6 (ENSOJAG00000013334)	FCSK (ENSOJAG00000013383)	PCLAF (ENSOJAG00000013420)	nedd1 (ENSOJAG00000013428)	lyrm5b (ENSOJAG00000013446)	ENSOJAG00000013461	ENSOJAG00000013468	commd9 (ENSOJAG00000013477)	zgc:114188 (ENSOJAG00000013484)	ENSOJAG00000013520	cstpp1 (ENSOJAG00000013533)	DBX1 (ENSOJAG00000013901)	dnaaf4 (ENSOJAG00000013916)	anpepb.1 (ENSOJAG00000013970)	ANPEP (ENSOJAG00000014425)
Indian medaka	MODERN SPECIES	15	ENSOMEG00000000689	ENSOMEG00000016317	ENSOMEG00000016331	IRX5 (ENSOMEG00000016355)	ENSOMEG00000016388	rpgrip1l (ENSOMEG00000016490)	NOX5 (ENSOMEG00000016523)	ambra1b (ENSOMEG00000016619)	ENSOMEG00000016654	mdkb (ENSOMEG00000016668)	DGKZ (ENSOMEG00000016895)	PHF21A (ENSOMEG00000016967)	ENSOMEG00000016977	ENSOMEG00000016992	ENSOMEG00000017056	ENSOMEG00000017088 ##22	actr6 (ENSOMEG00000017107)	ENSOMEG00000017122	FCSK (ENSOMEG00000017194)	PCLAF (ENSOMEG00000017224)	nedd1 (ENSOMEG00000017252)	lyrm5b (ENSOMEG00000017270)	ENSOMEG00000017317	ENSOMEG00000017340	commd9 (ENSOMEG00000017360)	zgc:114188 (ENSOMEG00000017396)	cart2 (ENSOMEG00000017414)	cstpp1 (ENSOMEG00000017441)	ckap5 (ENSOMEG00000017514)	DBX1 (ENSOMEG00000017547)	dnaaf4 (ENSOMEG00000017571)
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00950000182940.b.a.a.g.a	ENSGT00940000154876.a.b.b	ENSGT00940000154876.a.b.a
Pomacentridae	ANCESTRAL SPECIES	43	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000162591	ENSGT00520000055620.B
Pomacentridae_A	ANCESTRAL SPECIES	56	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00940000162591	ENSGT00520000055620.B	ENSGT00950000183003.a.b	ENSGT00940000159483.a.a	ENSGT00940000163250.A.b	ENSGT00950000183202.a.b
Amphiprion	ANCESTRAL SPECIES	73	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00940000162591	ENSGT00520000055620.B	ENSGT00940000159483.a.a	ENSGT00940000163250.A.b	ENSGT00950000183202.a.b.n
Orange clownfish	MODERN SPECIES	18	FCSK (ENSAPEG00000002727)	PCLAF (ENSAPEG00000002713)	nedd1 (ENSAPEG00000002649)	lyrm5b (ENSAPEG00000002631)	si:ch211-59o9.10 (ENSAPEG00000002616)	ambra1b (ENSAPEG00000002507)	ENSAPEG00000002478	ENSAPEG00000002469	DGKZ (ENSAPEG00000002165)	PHF21A (ENSAPEG00000001925)	ENSAPEG00000001855	PRDM11 (ENSAPEG00000001799)	ENSAPEG00000001763	ENSAPEG00000001731	ENSAPEG00000001655	ENSAPEG00000001598 ##22	actr6 (ENSAPEG00000001522)	ENSAPEG00000001514	sycp3 (ENSAPEG00000001494)	NOX5 (ENSAPEG00000001440)	rpgrip1l (ENSAPEG00000000985)	IRX5 (ENSAPEG00000000940)	ENSAPEG00000000796	ENSAPEG00000000724	ENSAPEG00000000687	ENSAPEG00000000667	SNX20 (ENSAPEG00000000649)	ENSAPEG00000000573	snrkb (ENSAPEG00000000540)	ano10b (ENSAPEG00000000462)	fa2h (ENSAPEG00000000423)
Clown anemonefish	MODERN SPECIES	3461																ENSAOCG00000021748 ##22	actr6 (ENSAOCG00000021704)	ENSAOCG00000002495	slc29a1a (ENSAOCG00000021622)	ENSAOCG00000021565	ENSAOCG00000021552
Spiny chromis	MODERN SPECIES	992										ENSAPOG00000008391	ENSAPOG00000008413	PRDM11 (ENSAPOG00000008441)	ENSAPOG00000008446	ENSAPOG00000008478	ENSAPOG00000008489	ENSAPOG00000008499 ##22	actr6 (ENSAPOG00000008554)
Bicolor damselfish	MODERN SPECIES	2579																ENSSPAG00000002876 ##22	actr6 (ENSSPAG00000002891)	sycp3 (ENSSPAG00000002939)	ENSSPAG00000003042
Cichlidae	ANCESTRAL SPECIES	83		ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062
Midas cichlid	MODERN SPECIES	225		RBL2 (ENSACIG00000018550)	ENSACIG00000018591	IRX5 (ENSACIG00000018601)	rpgrip1l (ENSACIG00000018623)	NOX5 (ENSACIG00000018681)	ambra1b (ENSACIG00000018702)	ENSACIG00000018729	mdkb (ENSACIG00000018809)	DGKZ (ENSACIG00000018820)	PHF21A (ENSACIG00000018865)	PRDM11 (ENSACIG00000018938)	ENSACIG00000018954	ENSACIG00000018963	ENSACIG00000018975	ENSACIG00000018986 ##22	actr6 (ENSACIG00000019001)	FCSK (ENSACIG00000019023)	ENSACIG00000019083	nedd1 (ENSACIG00000019095)	znf277 (ENSACIG00000019164)	ENSACIG00000019183	spg11 (ENSACIG00000019210)	CIAO2A (ENSACIG00000019357)
Pseudocrenilabrinae	ANCESTRAL SPECIES	42			ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h	ENSGT00940000164099.a.b	ENSGT00940000155465.j	ENSGT00940000164138	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	30	ENSGT00940000159496.l	ENSGT00940000159100.h	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00390000000062	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h	ENSGT00940000164099.a.b	ENSGT00940000155465.j	ENSGT00940000164138	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a	ENSGT00390000017697.a
Haplochromini	ANCESTRAL SPECIES	27	ENSGT00940000159496.l	ENSGT00940000159100.h	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a.e	ENSGT00990000204734	ENSGT00940000158553.b.a.f	ENSGT00390000000062	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h	ENSGT00940000164099.a.b	ENSGT00940000155465.j	ENSGT00940000164138	ENSGT00940000157859.a.b
Haplochromini_A	ANCESTRAL SPECIES	25	ENSGT00390000011620.b.e	ENSGT00940000159496.l	ENSGT00940000159100.h	ENSGT00520000055620.B.k.a	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a.e	ENSGT00990000204734.a	ENSGT00390000000062	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h	ENSGT00940000164099.a.b	ENSGT00940000155465.j	ENSGT00940000164138	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a
Haplochromini_B	ANCESTRAL SPECIES	67	ENSGT00940000159496.l	ENSGT00940000159100.h	ENSGT00950000183202.a.b	ENSGT00520000055620.B.k.a	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000002251	ENSGT00510000048252	ENSGT00940000164439	ENSGT00390000001810.a	ENSGT00940000158553.b.a.e	ENSGT00990000204734.a	ENSGT00390000000062	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h	ENSGT00940000164099.a.b	ENSGT00940000155465.j	ENSGT00940000164138	ENSGT00940000157859.a.b	ENSGT01030000234534.B.a.b.a.a
Eastern happy	MODERN SPECIES	19	ENSACLG00000021798	rpgrip1l (ENSACLG00000021843)	NOX5 (ENSACLG00000021924)	ambra1b (ENSACLG00000022006)	ENSACLG00000022090	ENSACLG00000022189	mdkb (ENSACLG00000022271)	DGKZ (ENSACLG00000022285)	ENSACLG00000022387	PHF21A (ENSACLG00000022400)	PRDM11 (ENSACLG00000022418)	ENSACLG00000022430	ENSACLG00000022441	ENSACLG00000022469	ENSACLG00000022494	ENSACLG00000022504 ##22	actr6 (ENSACLG00000022517)	ENSACLG00000022567	FCSK (ENSACLG00000022626)	PCLAF (ENSACLG00000022657)	nedd1 (ENSACLG00000022669)	lyrm5b (ENSACLG00000022704)	ENSACLG00000022707	ENSACLG00000022721	sycp3 (ENSACLG00000022736)	ENSACLG00000022744	ENSACLG00000022808	ENSACLG00000022820	ENSACLG00000022826	ITGA11 (ENSACLG00000022852)	ENSACLG00000022942
Zebra mbuna	MODERN SPECIES	1110	slc12a3 (ENSMZEG00005002901)	herpud1 (ENSMZEG00005002860)	cetp (ENSMZEG00005002845)	rpgrip1l (ENSMZEG00005002793)	NOX5 (ENSMZEG00005002723)	ambra1b (ENSMZEG00005002673)	ENSMZEG00005002651	mdkb (ENSMZEG00005002642)	DGKZ (ENSMZEG00005002561)	PHF21A (ENSMZEG00005002519)	PRDM11 (ENSMZEG00005002489)	ENSMZEG00005002480	ENSMZEG00005002468	ENSMZEG00005002453	ENSMZEG00005002446	ENSMZEG00005002433 ##22	actr6 (ENSMZEG00005002411)	FCSK (ENSMZEG00005002399)	PCLAF (ENSMZEG00005002394)	nedd1 (ENSMZEG00005002377)	lyrm5b (ENSMZEG00005002365)	ENSMZEG00005002349	ENSMZEG00005002329	sycp3 (ENSMZEG00005002309)	ENSMZEG00005002289	ENSMZEG00005002266	ENSMZEG00005002250	ITGA11 (ENSMZEG00005002210)	ENSMZEG00005002193	CLN6 (ENSMZEG00005001296)	CALML4 (ENSMZEG00005001256)
P. nyererei	MODERN SPECIES	449	CHST8 (ENSPNYG00000001932)	ENSPNYG00000001845	IRX5 (ENSPNYG00000001801)	rpgrip1l (ENSPNYG00000001728)	NOX5 (ENSPNYG00000001666)	ambra1b (ENSPNYG00000001588)	ENSPNYG00000001568	mdkb (ENSPNYG00000001513)	DGKZ (ENSPNYG00000001190)	PHF21A (ENSPNYG00000001089)	PRDM11 (ENSPNYG00000001057)	ENSPNYG00000001046	ENSPNYG00000001020	ENSPNYG00000001005	ENSPNYG00000000974	ENSPNYG00000000936 ##22	actr6 (ENSPNYG00000000889)	FCSK (ENSPNYG00000000816)	PCLAF (ENSPNYG00000000810)	nedd1 (ENSPNYG00000023142)	lyrm5b (ENSPNYG00000023136)	ENSPNYG00000023131	sycp3 (ENSPNYG00000023119)	ENSPNYG00000023107	ENSPNYG00000023093	ENSPNYG00000023084	ITGA11 (ENSPNYG00000023074)	ENSPNYG00000023067	CLN6 (ENSPNYG00000023044)	CALML4 (ENSPNYG00000023026)	ENSPNYG00000023015
Burton s mouthbrooder	MODERN SPECIES	483	KCTD15 (ENSHBUG00000007115)	CHST8 (ENSHBUG00000007065)	ENSHBUG00000007055	ENSHBUG00000007034	rpgrip1l (ENSHBUG00000006943)	NOX5 (ENSHBUG00000006926)	ambra1b (ENSHBUG00000006893)	ENSHBUG00000006849	mdkb (ENSHBUG00000000169)	DGKZ (ENSHBUG00000006799)	PHF21A (ENSHBUG00000006727)	PRDM11 (ENSHBUG00000006714)	ENSHBUG00000006689	ENSHBUG00000006678	ENSHBUG00000006654	ENSHBUG00000006614 ##22	actr6 (ENSHBUG00000006598)	FCSK (ENSHBUG00000006533)	PCLAF (ENSHBUG00000006492)	nedd1 (ENSHBUG00000006485)	lyrm5b (ENSHBUG00000006476)	ENSHBUG00000006462	ENSHBUG00000006447	sycp3 (ENSHBUG00000006443)	ENSHBUG00000006430	ENSHBUG00000006415	ENSHBUG00000006383	ITGA11 (ENSHBUG00000006362)	ENSHBUG00000006349	CLN6 (ENSHBUG00000006344)	CALML4 (ENSHBUG00000000801)
Nile tilapia	MODERN SPECIES	19	nedd1 (ENSONIG00000010563)	ENSONIG00000033180	FCSK (ENSONIG00000010560)	rpgrip1l (ENSONIG00000018233)	NOX5 (ENSONIG00000018231)	ambra1b (ENSONIG00000018229)	ENSONIG00000018227	mdkb (ENSONIG00000018226)	DGKZ (ENSONIG00000018220)	PHF21A (ENSONIG00000018218)	PRDM11 (ENSONIG00000024618)	ENSONIG00000040079	ENSONIG00000018215	ENSONIG00000020618	ENSONIG00000018213	ENSONIG00000018207 ##22	actr6 (ENSONIG00000018203)
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00990000204734	ENSGT00390000001810.a	ENSGT00940000158553.b.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT01010000229167	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b
Carangaria	ANCESTRAL SPECIES	6	ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b
Carangaria_A	ANCESTRAL SPECIES		ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b
Seriola	ANCESTRAL SPECIES	165											ENSGT00940000159837	ENSGT00730000111696.b.e	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252
Greater amberjack	MODERN SPECIES	132	hsd17b2 (ENSSDUG00000000619)	gpia (ENSSDUG00000000541)	lsm14aa (ENSSDUG00000000495)	ENSSDUG00000000429	kctd15a (ENSSDUG00000000401)	CHST8 (ENSSDUG00000000397)	tph2 (ENSSDUG00000000350)	tbc1d15 (ENSSDUG00000000277)	ZFC3H1 (ENSSDUG00000000244)	PRDM11 (ENSSDUG00000000235)	ENSSDUG00000000211	ENSSDUG00000000204	ENSSDUG00000000167	ENSSDUG00000000117	ENSSDUG00000000086	ENSSDUG00000021488 ##22	actr6 (ENSSDUG00000021467)	sycp3 (ENSSDUG00000021453)	si:ch211-59o9.10 (ENSSDUG00000021442)	lyrm5b (ENSSDUG00000021436)	nedd1 (ENSSDUG00000021390)	PCLAF (ENSSDUG00000021380)
Yellowtail amberjack	MODERN SPECIES	2219															ENSSLDG00000004463	ENSSLDG00000004442 ##22	actr6 (ENSSLDG00000004379)	sycp3 (ENSSLDG00000004209)	lyrm5b (ENSSLDG00000004159)
Barramundi perch	MODERN SPECIES	31								mdkb (ENSLCAG00010000875)	DGKZ (ENSLCAG00010000837)	ENSLCAG00010000806	ENSLCAG00010000781	ENSLCAG00010000776	PRDM11 (ENSLCAG00010000770)	ENSLCAG00010000768	ENSLCAG00010000765	ENSLCAG00010000692 ##22	actr6 (ENSLCAG00010000610)	sycp3 (ENSLCAG00010000570)	si:ch211-59o9.10 (ENSLCAG00010000556)	lyrm5b (ENSLCAG00010000546)	ftsj1 (ENSLCAG00010000530)	brd1b (ENSLCAG00010000509)	ENSLCAG00010000493	ENSLCAG00010000489	ENSLCAG00010000482	ENSLCAG00010000456	grm8b (ENSLCAG00010000405)	pot1 (ENSLCAG00010000346)	GPR37 (ENSLCAG00010000337)	SPAM1 (ENSLCAG00010000329) #7	ENSLCAG00010000320 #7
Pleuronectoidei	ANCESTRAL SPECIES												ENSGT00940000159837	ENSGT00730000111696.b.d	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00990000204734	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h
Turbot	MODERN SPECIES	1	ENSSMAG00000032849	ENSSMAG00000032605	ambra1b (ENSSMAG00000019264)	ENSSMAG00000019136	ENSSMAG00000019083	ENSSMAG00000036853	ENSSMAG00000019069	ENSSMAG00000036455	ENSSMAG00000025609	ENSSMAG00000018983	ENSSMAG00000030267	ENSSMAG00000018927	ENSSMAG00000018919	ENSSMAG00000023542	ENSSMAG00000018878	ENSSMAG00000018845 ##22	ENSSMAG00000018810	ENSSMAG00000018749	ENSSMAG00000018680	ENSSMAG00000037101	ENSSMAG00000018585	ENSSMAG00000030786	ENSSMAG00000033887	ENSSMAG00000018544	ENSSMAG00000018479	ENSSMAG00000034286	ENSSMAG00000018443	ENSSMAG00000018431	ENSSMAG00000018426	ITGA11 (ENSSMAG00000018384)	ENSSMAG00000018363
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00940000155938.b.b	ENSGT00950000183202.a.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00530000063759.a	ENSGT00940000155938.b.b	ENSGT00950000183202.a.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b
Climbing perch	MODERN SPECIES	19	ENSATEG00000013794	ENSATEG00000013755	rpgrip1l (ENSATEG00000013724)	ENSATEG00000013689	ambra1b (ENSATEG00000013668)	ENSATEG00000013658	ENSATEG00000027168	mdkb (ENSATEG00000013643)	DGKZ (ENSATEG00000013496)	PHF21A (ENSATEG00000013406)	ENSATEG00000013354	ENSATEG00000029658	ENSATEG00000013321	ENSATEG00000013296	ENSATEG00000013277	ENSATEG00000013263 ##22	actr6 (ENSATEG00000013224)	sycp3 (ENSATEG00000013194)	si:ch211-59o9.10 (ENSATEG00000027594)	lyrm5b (ENSATEG00000013180)	nedd1 (ENSATEG00000013081)	ENSATEG00000013057	ENSATEG00000013012	ENSATEG00000027876	ENSATEG00000012744	ENSATEG00000012699	ENSATEG00000012691	zgc:193812 (ENSATEG00000027113)	ENSATEG00000028003	ENSATEG00000025785	ENSATEG00000026005
Siamese fighting fish	MODERN SPECIES	17	hsd17b2 (ENSBSLG00000004690)	mphosph6 (ENSBSLG00000004687)	SNX20 (ENSBSLG00000004685)	IRX5 (ENSBSLG00000004615)	ENSBSLG00000004613	rpgrip1l (ENSBSLG00000004609)	ambra1b (ENSBSLG00000004581)	ENSBSLG00000004573	mdkb (ENSBSLG00000004571)	DGKZ (ENSBSLG00000004551)	PHF21A (ENSBSLG00000004450)	PRDM11 (ENSBSLG00000004419)	ENSBSLG00000004415	ENSBSLG00000004413	ENSBSLG00000004410	ENSBSLG00000004341 ##22	actr6 (ENSBSLG00000004319)	sycp3 (ENSBSLG00000004303)	si:ch211-59o9.10 (ENSBSLG00000004296)	nedd1 (ENSBSLG00000004290)	PCLAF (ENSBSLG00000004286)	FCSK (ENSBSLG00000004244)	commd9 (ENSBSLG00000004237)	ENSBSLG00000004214	zgc:114188 (ENSBSLG00000004175)	ENSBSLG00000004160	zgc:193812 (ENSBSLG00000004152)	ENSBSLG00000004145	PRR5L (ENSBSLG00000004026)	ENSBSLG00000003987	ENSBSLG00000003971
Zig-zag eel	MODERN SPECIES	20	ENSMAMG00000027445	ENSMAMG00000015799	ENSMAMG00000015781	rpgrip1l (ENSMAMG00000015755)	ENSMAMG00000015722	ambra1b (ENSMAMG00000015652)	ENSMAMG00000015636	mdkb (ENSMAMG00000015628)	DGKZ (ENSMAMG00000015557)	PHF21A (ENSMAMG00000015525)	ENSMAMG00000027463	ENSMAMG00000015482	ENSMAMG00000024273	ENSMAMG00000015445	ENSMAMG00000015415	ENSMAMG00000015401 ##22	actr6 (ENSMAMG00000015332)	sycp3 (ENSMAMG00000015042)	lyrm5b (ENSMAMG00000014996)	nedd1 (ENSMAMG00000014949)	ENSMAMG00000014937	ENSMAMG00000014918	ENSMAMG00000014904	ENSMAMG00000014892	ENSMAMG00000014878	ENSMAMG00000014842	ENSMAMG00000014831	zgc:193812 (ENSMAMG00000014823)	ENSMAMG00000014812	ENSMAMG00000028248	ENSMAMG00000014777
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT01010000229167	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b
Tetraodontidae	ANCESTRAL SPECIES	32			ENSGT00950000183202.a.b	ENSGT00940000163250.A.b	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h	ENSGT00940000164099.a.b	ENSGT00940000155465.j
Tetraodon	MODERN SPECIES	4	psma1 (ENSTNIG00000013744)	ENSTNIG00000013745	INSC (ENSTNIG00000013746)	ENSTNIG00000013747	lamb1a (ENSTNIG00000013748)	ENSTNIG00000013749	nup160 (ENSTNIG00000013750)	ENSTNIG00000013751	ENSTNIG00000013752	mdkb (ENSTNIG00000013753)	DGKZ (ENSTNIG00000013754)	PHF21A (ENSTNIG00000013755)	ENSTNIG00000002691	ENSTNIG00000002690	ENSTNIG00000002689	ENSTNIG00000002688 ##22	actr6 (ENSTNIG00000002687)	sycp3 (ENSTNIG00000002686)	nedd1 (ENSTNIG00000002685)	PCLAF (ENSTNIG00000002684)	FCSK (ENSTNIG00000002683)	commd9 (ENSTNIG00000002682)	sh3gl3b (ENSTNIG00000002681)	zgc:114188 (ENSTNIG00000002680)	cart2 (ENSTNIG00000001730)	ENSTNIG00000002679	PRR5L (ENSTNIG00000002678)	ENSTNIG00000002677	ENSTNIG00000002676	ENSTNIG00000002675	ENSTNIG00000002674
Fugu	MODERN SPECIES	21	ENSTRUG00000020426	IRX5 (ENSTRUG00000012894)	ENSTRUG00000031582	rpgrip1l (ENSTRUG00000012929)	NOX5 (ENSTRUG00000013075)	ambra1b (ENSTRUG00000013113)	ENSTRUG00000013182	mdkb (ENSTRUG00000013268)	DGKZ (ENSTRUG00000013299)	PHF21A (ENSTRUG00000013593)	PRDM11 (ENSTRUG00000025724)	ENSTRUG00000029929	ENSTRUG00000028978	ENSTRUG00000022045	ENSTRUG00000013659	ENSTRUG00000032757 ##22	actr6 (ENSTRUG00000013801)	sycp3 (ENSTRUG00000013870)	nedd1 (ENSTRUG00000013932)	PCLAF (ENSTRUG00000014009)	FCSK (ENSTRUG00000014015)	commd9 (ENSTRUG00000014104)	sh3gl3b (ENSTRUG00000014107)	zgc:114188 (ENSTRUG00000014186)	cart2 (ENSTRUG00000013661)	ENSTRUG00000024212	PRR5L (ENSTRUG00000014336)	ENSTRUG00000032221	ENSTRUG00000014375	ENSTRUG00000014407	ENSTRUG00000025542
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT01010000229167	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b
Ballan wrasse	MODERN SPECIES	318		rpgrip1l (ENSLBEG00000005179)	NOX5 (ENSLBEG00000005119)	ambra1b (ENSLBEG00000005034)	ENSLBEG00000004993	mdkb (ENSLBEG00000004974)	ENSLBEG00000004953	DGKZ (ENSLBEG00000004814)	PHF21A (ENSLBEG00000004736)	ENSLBEG00000004676	PRDM11 (ENSLBEG00000004656)	ENSLBEG00000004634	ENSLBEG00000004591	ENSLBEG00000004548	ENSLBEG00000004515	ENSLBEG00000004483 ##22	actr6 (ENSLBEG00000004442)	sycp3 (ENSLBEG00000004398)	lyrm5b (ENSLBEG00000004379)	si:ch211-59o9.10 (ENSLBEG00000004360)	nedd1 (ENSLBEG00000004331)	PCLAF (ENSLBEG00000004313)	ENSLBEG00000004274	FCSK (ENSLBEG00000004235)	COMMD9 (ENSLBEG00000004203)	ENSLBEG00000004183	zgc:114188 (ENSLBEG00000004090)	cart2 (ENSLBEG00000004068)	zgc:193812 (ENSLBEG00000004054)	ENSLBEG00000003973	ENSLBEG00000003929
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT01010000229167	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b
Perciformes	ANCESTRAL SPECIES	7	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT01010000229167	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00530000063981.b	ENSGT00940000159572.a.b
Cottioidei	ANCESTRAL SPECIES	37	ENSGT00390000009212	ENSGT00530000063759.a	ENSGT00940000159483.a.a	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00390000006548.a.b.b	ENSGT00940000164795	ENSGT00530000063981.b	ENSGT00940000159572.a.b	ENSGT00390000008748.b.h	ENSGT00940000164099.a.b	ENSGT00940000155465.j
Lumpfish	MODERN SPECIES	21	IRX5 (ENSCLMG00005022100)	rpgrip1l (ENSCLMG00005022101)	ENSCLMG00005022102	NOX5 (ENSCLMG00005000163)	ambra1b (ENSCLMG00005000358)	ENSCLMG00005000365	mdkb (ENSCLMG00005000367)	ENSCLMG00005000368	DGKZ (ENSCLMG00005000500)	PHF21A (ENSCLMG00005006087)	PRDM11 (ENSCLMG00005006116)	ENSCLMG00005006117	ENSCLMG00005006118	ENSCLMG00005006120	ENSCLMG00005006121	ENSCLMG00005006122 ##22	actr6 (ENSCLMG00005006124)	sycp3 (ENSCLMG00005006131)	si:ch211-59o9.10 (ENSCLMG00005006132)	lyrm5b (ENSCLMG00005006133)	nedd1 (ENSCLMG00005006135)	PCLAF (ENSCLMG00005006139)	commd9 (ENSCLMG00005006142)	zgc:114188 (ENSCLMG00005006143)	zgc:193812 (ENSCLMG00005006149)	ENSCLMG00005006152	ENSCLMG00005006154	ENSCLMG00005006155	ENSCLMG00005006157	ENSCLMG00005006165	CLN6 (ENSCLMG00005006166)
Perciformes_a	ANCESTRAL SPECIES	74								ENSGT00940000156124.c.b	ENSGT00940000164249.b.a.b.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00940000177432.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251
Pike perch	MODERN SPECIES	275								PHF21A (ENSSLUG00000020630)	ENSSLUG00000020641	PRDM11 (ENSSLUG00000020647)	ENSSLUG00000020650	ENSSLUG00000020654	ENSSLUG00000020658	ENSSLUG00000020661	ENSSLUG00000020668	ENSSLUG00000020670 ##22	actr6 (ENSSLUG00000020678)	sycp3 (ENSSLUG00000020700)	ENSSLUG00000020702	ENSSLUG00000020705	lyrm5b (ENSSLUG00000020708)	nedd1 (ENSSLUG00000020713)	PCLAF (ENSSLUG00000020716)	FCSK (ENSSLUG00000020735)
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00940000159483.a.a	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00950000183202.a.b	ENSGT00940000159483.a.a	ENSGT00980000201244	ENSGT00520000055620.B	ENSGT00940000162591	ENSGT00390000016223	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000176877	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00640000091774.a.b	ENSGT00950000183004.a.b.b ##22	ENSGT00720000108833	ENSGT00390000000062	ENSGT00940000158553.b.a	ENSGT00390000001810.a	ENSGT00940000164439	ENSGT00510000048252	ENSGT00390000002251	ENSGT00390000006218	ENSGT00940000157398.i.b	ENSGT00390000006548.a.b.b	ENSGT00390000018319.a.a.a.b.c	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00530000063981.b	ENSGT00940000159572.a.b
Large yellow croaker	MODERN SPECIES	39								ENSLCRG00005012879	mdkb (ENSLCRG00005012878)	DGKZ (ENSLCRG00005011680)	PHF21A (ENSLCRG00005011202)	PRDM11 (ENSLCRG00005011195)	cd59 (ENSLCRG00005011194)	ENSLCRG00005011192	ENSLCRG00005011189	ENSLCRG00005011187 ##22	actr6 (ENSLCRG00005011113)	sycp3 (ENSLCRG00005011110)	ambra1b (ENSLCRG00005011107)	NOX5 (ENSLCRG00005011101)	rpgrip1l (ENSLCRG00005010979)	ENSLCRG00005010971	ENSLCRG00005010961	RBL2 (ENSLCRG00005010934)	hsd17b2 (ENSLCRG00005010924)	mphosph6 (ENSLCRG00005010922)	SNX20 (ENSLCRG00005010921)	gpia (ENSLCRG00005010834)	lsm14aa (ENSLCRG00005010826)	ENSLCRG00005010823	KCTD15 (ENSLCRG00005010822)
Gilthead seabream	MODERN SPECIES	22	ENSSAUG00010000706	rpgrip1l (ENSSAUG00010000708)	NOX5 (ENSSAUG00010000717)	ambra1b (ENSSAUG00010000742)	ENSSAUG00010000751	mdkb (ENSSAUG00010000755)	DGKZ (ENSSAUG00010000773)	ENSSAUG00010000845	PHF21A (ENSSAUG00010000865)	ENSSAUG00010001040	PRDM11 (ENSSAUG00010001043)	ENSSAUG00010001046	ENSSAUG00010001047	ENSSAUG00010001052	ENSSAUG00010001055	ENSSAUG00010001059 ##22	actr6 (ENSSAUG00010001068)	sycp3 (ENSSAUG00010001074)	si:ch211-59o9.10 (ENSSAUG00010001077)	lyrm5b (ENSSAUG00010001079)	nedd1 (ENSSAUG00010001082)	PCLAF (ENSSAUG00010001088)	FCSK (ENSSAUG00010001091)	commd9 (ENSSAUG00010001102)	ENSSAUG00010001112	ENSSAUG00010001123	zgc:114188 (ENSSAUG00010001125)	ENSSAUG00010001133	zgc:193812 (ENSSAUG00010001135)	ENSSAUG00010001141	ENSSAUG00010001146
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	20	bmal1a (ENSMMDG00005018404)	btbd10a (ENSMMDG00005018367)	pth1a (ENSMMDG00005018364)	tcp11l1 (ENSMMDG00005018161)	hipk3a (ENSMMDG00005018148)	ENSMMDG00005018145	spon1b (ENSMMDG00005017999)	syt9b (ENSMMDG00005017970)	OLFML1 (ENSMMDG00005017963)	ENSMMDG00005017958	RASSF10 (ENSMMDG00005017954)	tead1a (ENSMMDG00005017895)	parvaa (ENSMMDG00005017819)	mical2b (ENSMMDG00005017690)	sycp3 (ENSMMDG00005017670)	ENSMMDG00005017665 ##22	zgc:103499 (ENSMMDG00005017664)	ENSMMDG00005017662	ENSMMDG00005017660	ENSMMDG00005017656	lrrk2 (ENSMMDG00005017275)	SLC6A15 (ENSMMDG00005017254)	alx1 (ENSMMDG00005017249)	RASSF9 (ENSMMDG00005017247)	NTS (ENSMMDG00005017244)	MGAT4C (ENSMMDG00005017242)	eif4g2b (ENSMMDG00005016863)	ENSMMDG00005016849	zgc:103499 (ENSMMDG00005016845)	borcs5 (ENSMMDG00005016839)	MGAT4C (ENSMMDG00005016836)
Pinecone sodierfish	MODERN SPECIES	20	ENSMMDG00005016614	PPIP5K1 (ENSMMDG00005016687)	ENSMMDG00005018062	hapln3 (ENSMMDG00005018067)	mfge8b (ENSMMDG00005018074)	ABHD2 (ENSMMDG00005018226)	rlbp1b (ENSMMDG00005018231)	ENSMMDG00005018236	pdia3 (ENSMMDG00005018245)	ckmt1 (ENSMMDG00005018331)	ENSMMDG00005018380	si:ch1073-281m9.1 (ENSMMDG00005018383)	ENSMMDG00005018384	alkbh3 (ENSMMDG00005018388)	hsd17b12a (ENSMMDG00005018395)	zgc:101783 (ENSMMDG00005018413) ##22	hal (ENSMMDG00005018417)	elk3 (ENSMMDG00005018420)	CDK17 (ENSMMDG00005018465)	ucmab (ENSMMDG00005021084)	camk1db (ENSMMDG00005021114)	dhtkd1 (ENSMMDG00005021586)	CELF2 (ENSMMDG00005021649)	taf3 (ENSMMDG00005021729)	ENSMMDG00005021734	ASB13 (ENSMMDG00005021741)	NET1 (ENSMMDG00005021777)	ENSMMDG00005022000	slc35b4 (ENSMMDG00005022002)	golt1bb (ENSMMDG00005022012)	ENSMMDG00005022014
Cod	MODERN SPECIES	22	ENSGMOG00000033624	ENSGMOG00000029428	ENSGMOG00000011112	ENSGMOG00000011136	faap24 (ENSGMOG00000030947)	ENSGMOG00000026187	ambra1b (ENSGMOG00000014863)	ENSGMOG00000033951	ENSGMOG00000009524	ENSGMOG00000028403	ENSGMOG00000009519	ENSGMOG00000009508	ENSGMOG00000035361	ENSGMOG00000031788	ENSGMOG00000034008	ENSGMOG00000031025 ##22	actr6 (ENSGMOG00000003691)	ENSGMOG00000027867	si:ch211-59o9.10 (ENSGMOG00000037257)	ENSGMOG00000003566	ENSGMOG00000003907	ENSGMOG00000024112	ENSGMOG00000003800	ENSGMOG00000030879	tnnt3a (ENSGMOG00000016942)	ENSGMOG00000027097	ENSGMOG00000034763	ENSGMOG00000036471	tnni2a.1 (ENSGMOG00000026765)	ENSGMOG00000031300	SYT8 (ENSGMOG00000016874)
Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a ##22
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a ##22
Sarcopterygii	ANCESTRAL SPECIES	6	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00940000153456.b.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Tetrapoda	ANCESTRAL SPECIES	14	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Amniota	ANCESTRAL SPECIES	22	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Sauria	ANCESTRAL SPECIES	13	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Lepidosauria	ANCESTRAL SPECIES	14	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
tuatara	MODERN SPECIES	1770														ENSSPUG00000004369	ENSSPUG00000004339	FAM3D (ENSSPUG00000004314) ##22	FAM107A (ENSSPUG00000004300)	ACOX2 (ENSSPUG00000004285)	KCTD6 (ENSSPUG00000004273)	ENSSPUG00000004268	ENSSPUG00000004253	PXK (ENSSPUG00000004246)	RPP14 (ENSSPUG00000004221)	PRKAR2A (ENSSPUG00000004206)	SLC25A20 (ENSSPUG00000004178)	ARIH2 (ENSSPUG00000004155)	ENSSPUG00000004140	P4HTM (ENSSPUG00000004126)	WDR6 (ENSSPUG00000004121)	DALRD3 (ENSSPUG00000004108)	IMPDH2 (ENSSPUG00000004093)
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225.e.a.a	ENSGT00510000047225.e.a.b	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00390000014570	ENSGT00940000164203	ENSGT00420000029923
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225.e.a.a	ENSGT00510000047225.e.a.b	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154715.b.k.b.a.a.a.b.a.b.a.a.a.a.b.a.a.a.a.a.a.b.d.a	ENSGT00510000047225.e.a.b.b	ENSGT00510000047225.e.a.b.a	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00390000014570	ENSGT00420000029923
Elapidae_a	ANCESTRAL SPECIES	8	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154715.b.k.b.a.a.a.b.a.b.a.a.a.a.b.a.a.a.a.a.a.b.d.a
Acanthophiinae	ANCESTRAL SPECIES	10	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00990000213253	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154715.b.k.b.a.a.a.b.a.b.a.a.a.a.b.a.a.a.a.a.a.b.d.a
Mainland tiger snake	MODERN SPECIES	186													ENSNSUG00000010914	CFAP20DC (ENSNSUG00000010909)	ENSNSUG00000010902	FAM3D (ENSNSUG00000010895) ##22	ENSNSUG00000010893	ACOX2 (ENSNSUG00000010778)	KCTD6 (ENSNSUG00000010775)	PXK (ENSNSUG00000010773)	RPP14 (ENSNSUG00000010772)	HTD2 (ENSNSUG00000010771)	ENSNSUG00000010770
Eastern brown snake	MODERN SPECIES	3	ENSPTXG00000002518	PRICKLE2 (ENSPTXG00000002510)	PSMD6 (ENSPTXG00000002506)	ATXN7 (ENSPTXG00000002502)	THOC7 (ENSPTXG00000002499)	SNTN (ENSPTXG00000002496)	SYNPR (ENSPTXG00000002481)	ENSPTXG00000002477 ##17	ENSPTXG00000002475 ##17	FEZF2 (ENSPTXG00000002474)	C3orf14 (ENSPTXG00000002472)	PTPRG (ENSPTXG00000002471)	ENSPTXG00000002469	CFAP20DC (ENSPTXG00000002465)	ENSPTXG00000002464	FAM3D (ENSPTXG00000002455) ##22	FAM107A (ENSPTXG00000002453)	ACOX2 (ENSPTXG00000002438)	KCTD6 (ENSPTXG00000002434)	PDHB (ENSPTXG00000002433)	PXK (ENSPTXG00000002430)	HTD2 (ENSPTXG00000002429)	RPP14 (ENSPTXG00000002426)	ENSPTXG00000002425	ENSPTXG00000002424	ENSPTXG00000002422
Indian cobra	MODERN SPECIES	1	PRICKLE2 (ENSNNAG00000004484)	PSMD6 (ENSNNAG00000004451)	ATXN7 (ENSNNAG00000004394)	THOC7 (ENSNNAG00000004290)	SNTN (ENSNNAG00000004265)	SYNPR (ENSNNAG00000004217)	ENSNNAG00000003563 ##17	FEZF2 (ENSNNAG00000003488)	C3orf14 (ENSNNAG00000003478)	PTPRG (ENSNNAG00000003369)	ENSNNAG00000003339	ENSNNAG00000003324	ENSNNAG00000003319	ENSNNAG00000003297	ENSNNAG00000003287	FAM3D (ENSNNAG00000003223) ##22	FAM107A (ENSNNAG00000003195)	ACOX2 (ENSNNAG00000003161)	KCTD6 (ENSNNAG00000003141)	PDHB (ENSNNAG00000003128)	PXK (ENSNNAG00000003116)	RPP14 (ENSNNAG00000003101)	ENSNNAG00000003095	ENSNNAG00000003080	ENSNNAG00000003065	ENSNNAG00000003060	ENSNNAG00000003041	ENSNNAG00000002998	PRKAR2A (ENSNNAG00000002978)	SLC25A20 (ENSNNAG00000002971)	ARIH2 (ENSNNAG00000002958)
Lizard	MODERN SPECIES	1	LRIG1 (ENSACAG00000002482)	ENSACAG00000039409	SLC25A26 (ENSACAG00000002472)	ENSACAG00000038697	ENSACAG00000041637	ENSACAG00000040654	ENSACAG00000038408	ENSACAG00000038848	ENSACAG00000009205	ENSACAG00000036364	ENSACAG00000039580	ENSACAG00000044057	ENSACAG00000042705	ENSACAG00000036917	CFAP20DC (ENSACAG00000011335)	FAM3D (ENSACAG00000011383) ##22	FAM107A (ENSACAG00000011413)	ACOX2 (ENSACAG00000011418)	KCTD6 (ENSACAG00000011662)	PDHB (ENSACAG00000011676)	PXK (ENSACAG00000011721)	ENSACAG00000038296	ENSACAG00000039188	ENSACAG00000040241	HTD2 (ENSACAG00000040522)	RPP14 (ENSACAG00000011880)	ENSACAG00000011899	ENSACAG00000011937	ENSACAG00000029351	ENSACAG00000041483	PRKAR2A (ENSACAG00000012010)
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT01030000237505	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225.e.a.a	ENSGT00510000047225.e.a.b.c	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570
Argentine black and white tegu	MODERN SPECIES	30	ATXN7 (ENSSMRG00000017404)	THOC7 (ENSSMRG00000017403)	SNTN (ENSSMRG00000017390)	SYNPR (ENSSMRG00000017386)	ENSSMRG00000017371 ##17	FEZF2 (ENSSMRG00000017366)	C3orf14 (ENSSMRG00000017365)	PTPRG (ENSSMRG00000017361)	ENSSMRG00000017352	ENSSMRG00000017349	ENSSMRG00000017345	ENSSMRG00000017344	ENSSMRG00000017340	ENSSMRG00000017336	CFAP20DC (ENSSMRG00000017334)	FAM3D (ENSSMRG00000017332) ##22	FAM107A (ENSSMRG00000017331)	ACOX2 (ENSSMRG00000017330)	KCTD6 (ENSSMRG00000017328)	PDHB (ENSSMRG00000017327)	PXK (ENSSMRG00000017325)	ENSSMRG00000017324	HTD2 (ENSSMRG00000017322)	RPP14 (ENSSMRG00000017321)	ENSSMRG00000017320	ENSSMRG00000017319	ENSSMRG00000017314	PRKAR2A (ENSSMRG00000017313)	SLC25A20 (ENSSMRG00000017311)	ARIH2 (ENSSMRG00000017308)	ENSSMRG00000017307
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000013379 ##17	FEZF2 (ENSPMRG00000013500)	C3orf14 (ENSPMRG00000013506)	PTPRG (ENSPMRG00000013512)	ENSPMRG00000013533	ENSPMRG00000013540	ENSPMRG00000013542	ENSPMRG00000013548	ENSPMRG00000013552	ENSPMRG00000013561	ENSPMRG00000013569	ENSPMRG00000013581	ENSPMRG00000013585	ENSPMRG00000013590	CFAP20DC (ENSPMRG00000013595)	FAM3D (ENSPMRG00000013607) ##22	FAM107A (ENSPMRG00000013615)	ACOX2 (ENSPMRG00000013621)	KCTD6 (ENSPMRG00000013629)	PDHB (ENSPMRG00000013633)	PXK (ENSPMRG00000013637)	RPP14 (ENSPMRG00000013654)	HTD2 (ENSPMRG00000013658)	ENSPMRG00000013662	ENSPMRG00000013672	ENSPMRG00000013689	ENSPMRG00000013692	PRKAR2A (ENSPMRG00000013697)	ENSPMRG00000013713	SLC25A20 (ENSPMRG00000013723)	ARIH2 (ENSPMRG00000013741)
Archelosauria	ANCESTRAL SPECIES	17	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Archosauria	ANCESTRAL SPECIES	24	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Aves	ANCESTRAL SPECIES	29	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Neognathae	ANCESTRAL SPECIES	27	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Neognathae_b	ANCESTRAL SPECIES	18	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Neognathae_c	ANCESTRAL SPECIES	21	ENSGT00550000074950	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Kakapo	MODERN SPECIES	3	SLC25A26 (ENSSHBG00005014260)	MAGI1 (ENSSHBG00005014282)	ADAMTS9 (ENSSHBG00005014460)	PRICKLE2 (ENSSHBG00005014821)	PSMD6 (ENSSHBG00005014829)	ATXN7 (ENSSHBG00005014850)	THOC7 (ENSSHBG00005014867)	SNTN (ENSSHBG00005014875)	SYNPR (ENSSHBG00005014888)	ENSSHBG00005015047 ##17	FEZF2 (ENSSHBG00005016024)	C3orf14 (ENSSHBG00005016035)	PTPRG (ENSSHBG00005016050)	ENSSHBG00005016057	CFAP20DC (ENSSHBG00005016082)	FAM3D (ENSSHBG00005016094) ##22	FAM107A (ENSSHBG00005016102)	ACOX2 (ENSSHBG00005016121)	KCTD6 (ENSSHBG00005016263)	PDHB (ENSSHBG00005016272)	PXK (ENSSHBG00005016286)	HTD2 (ENSSHBG00005016298)	PRKAR2A (ENSSHBG00005016314)	SLC25A20 (ENSSHBG00005016329)	ARIH2 (ENSSHBG00005016333)	P4HTM (ENSSHBG00005016338)	ENSSHBG00005016345	WDR6 (ENSSHBG00005016352)	DALRD3 (ENSSHBG00005016365)	NDUFAF3 (ENSSHBG00005016388)	IMPDH2 (ENSSHBG00005016402)
Golden eagle	MODERN SPECIES	12	SLC25A26 (ENSACCG00020016695)	MAGI1 (ENSACCG00020016667)	ADAMTS9 (ENSACCG00020016650)	PRICKLE2 (ENSACCG00020016643)	PSMD6 (ENSACCG00020016638)	ATXN7 (ENSACCG00020016632)	THOC7 (ENSACCG00020016628)	SNTN (ENSACCG00020016624)	SYNPR (ENSACCG00020016617)	ENSACCG00020016282 ##17	FEZF2 (ENSACCG00020014787)	C3orf14 (ENSACCG00020014772)	PTPRG (ENSACCG00020014073)	ENSACCG00020013179	CFAP20DC (ENSACCG00020013154)	FAM3D (ENSACCG00020013103) ##22	FAM107A (ENSACCG00020013007)	ACOX2 (ENSACCG00020012979)	KCTD6 (ENSACCG00020012941)	PDHB (ENSACCG00020012932)	PXK (ENSACCG00020012820)	HTD2 (ENSACCG00020012755)	RPP14 (ENSACCG00020012728)	PRKAR2A (ENSACCG00020012703)	SLC25A20 (ENSACCG00020012666)	ARIH2 (ENSACCG00020012611)	ENSACCG00020012568	P4HTM (ENSACCG00020012539)	ENSACCG00020012507	DALRD3 (ENSACCG00020012461)	NDUFAF3 (ENSACCG00020012422)
Passeriformes	ANCESTRAL SPECIES	16	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00950000185179	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Great tit	MODERN SPECIES	3	MAGI1 (ENSPMJG00000005138)	ADAMTS9 (ENSPMJG00000005116)	PRICKLE2 (ENSPMJG00000005105)	PSMD6 (ENSPMJG00000005080)	ATXN7 (ENSPMJG00000005075)	THOC7 (ENSPMJG00000005073)	SNTN (ENSPMJG00000005070)	SYNPR (ENSPMJG00000005050)	ENSPMJG00000005031 ##17	FEZF2 (ENSPMJG00000005019)	C3orf14 (ENSPMJG00000005013)	PTPRG (ENSPMJG00000005009)	ENSPMJG00000005008	ENSPMJG00000005000	CFAP20DC (ENSPMJG00000004990)	FAM3D (ENSPMJG00000004987) ##22	FAM107A (ENSPMJG00000004986)	ACOX2 (ENSPMJG00000004983)	KCTD6 (ENSPMJG00000004981)	PDHB (ENSPMJG00000004971)	PXK (ENSPMJG00000004956)	RPP14 (ENSPMJG00000004952)	HTD2 (ENSPMJG00000004951)	PRKAR2A (ENSPMJG00000004949)	SLC25A20 (ENSPMJG00000004945)	ARIH2 (ENSPMJG00000004935)	ENSPMJG00000004934	P4HTM (ENSPMJG00000004932)	ENSPMJG00000004927	DALRD3 (ENSPMJG00000004925)	NDUFAF3 (ENSPMJG00000004921)
Passeriformes_d	ANCESTRAL SPECIES	16	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00950000185179	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Flycatcher	MODERN SPECIES	3	ENSFALG00000023566	MAGI1 (ENSFALG00000013283)	ADAMTS9 (ENSFALG00000013265)	PRICKLE2 (ENSFALG00000013263)	PSMD6 (ENSFALG00000013261)	ATXN7 (ENSFALG00000013254)	THOC7 (ENSFALG00000013245)	ENSFALG00000024803	SYNPR (ENSFALG00000013235)	ENSFALG00000013227 ##17	FEZF2 (ENSFALG00000013225)	C3orf14 (ENSFALG00000013220)	PTPRG (ENSFALG00000013214)	ENSFALG00000024618	CFAP20DC (ENSFALG00000013205)	FAM3D (ENSFALG00000024598) ##22	ENSFALG00000028004	ENSFALG00000023249	FAM107A (ENSFALG00000023435)	ACOX2 (ENSFALG00000013192)	KCTD6 (ENSFALG00000029058)	PDHB (ENSFALG00000013169)	PXK (ENSFALG00000013159)	HTD2 (ENSFALG00000023112)	RPP14 (ENSFALG00000013148)	PRKAR2A (ENSFALG00000023232)	SLC25A20 (ENSFALG00000013123)	ARIH2 (ENSFALG00000013114)	ENSFALG00000013102	P4HTM (ENSFALG00000013097)	ENSFALG00000023573
Passeriformes_g	ANCESTRAL SPECIES	16	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00950000185179	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312	ENSGT00910000146976
Passeroidea	ANCESTRAL SPECIES	16	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00950000185179	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00390000014570	ENSGT00940000164203	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Common canary	MODERN SPECIES	15	PRICKLE2 (ENSSCAG00000007292)	PSMD6 (ENSSCAG00000007252)	ATXN7 (ENSSCAG00000007233)	ENSSCAG00000007232	THOC7 (ENSSCAG00000007223)	SNTN (ENSSCAG00000007220)	SYNPR (ENSSCAG00000007215)	ENSSCAG00000006382 ##17	FEZF2 (ENSSCAG00000006244)	C3orf14 (ENSSCAG00000006240)	PTPRG (ENSSCAG00000006226)	ENSSCAG00000006217	ENSSCAG00000006213	ENSSCAG00000006207	ENSSCAG00000006201	FAM3D (ENSSCAG00000006195) ##22	FAM107A (ENSSCAG00000006193)	ACOX2 (ENSSCAG00000006188)	KCTD6 (ENSSCAG00000006187)	PDHB (ENSSCAG00000006180)	PXK (ENSSCAG00000005953)	ENSSCAG00000005914	HTD2 (ENSSCAG00000005909)	PRKAR2A (ENSSCAG00000005901)	SLC25A20 (ENSSCAG00000005883)	ARIH2 (ENSSCAG00000005865)	ENSSCAG00000005861	ENSSCAG00000005857	P4HTM (ENSSCAG00000005804)	DALRD3 (ENSSCAG00000005791)	NDUFAF3 (ENSSCAG00000005786)
Zebra finch	MODERN SPECIES	3	SLC25A26 (ENSTGUG00000009590)	MAGI1 (ENSTGUG00000009560)	ADAMTS9 (ENSTGUG00000009483)	PRICKLE2 (ENSTGUG00000009461)	PSMD6 (ENSTGUG00000009442)	ATXN7 (ENSTGUG00000009416)	THOC7 (ENSTGUG00000009431)	SNTN (ENSTGUG00000009426)	SYNPR (ENSTGUG00000018356)	ENSTGUG00000009352 ##17	C3orf14 (ENSTGUG00000026142)	FEZF2 (ENSTGUG00000021940)	PTPRG (ENSTGUG00000009280)	ENSTGUG00000026510	CFAP20DC (ENSTGUG00000009261)	FAM3D (ENSTGUG00000009255) ##22	FAM107A (ENSTGUG00000027669)	ACOX2 (ENSTGUG00000009192)	KCTD6 (ENSTGUG00000009191)	PDHB (ENSTGUG00000009179)	PXK (ENSTGUG00000009162)	ENSTGUG00000009157	PRKAR2A (ENSTGUG00000009123)	SLC25A20 (ENSTGUG00000009104)	ARIH2 (ENSTGUG00000009080)	P4HTM (ENSTGUG00000009060)	ENSTGUG00000009077	WDR6 (ENSTGUG00000009040)	NDUFAF3 (ENSTGUG00000009019)	DALRD3 (ENSTGUG00000009024)	IMPDH2 (ENSTGUG00000008980)
Medium ground finch	MODERN SPECIES	20	LRIG1 (ENSGFOG00000005456)	SLC25A26 (ENSGFOG00000005568)	MAGI1 (ENSGFOG00000005601)	ADAMTS9 (ENSGFOG00000005699)	PRICKLE2 (ENSGFOG00000005985)	PSMD6 (ENSGFOG00000005991)	ATXN7 (ENSGFOG00000005996)	THOC7 (ENSGFOG00000006002)	SNTN (ENSGFOG00000006009)	SYNPR (ENSGFOG00000006020)	ENSGFOG00000006121 ##17	C3orf14 (ENSGFOG00000008730)	PTPRG (ENSGFOG00000008759)	ENSGFOG00000009016	CFAP20DC (ENSGFOG00000004941)	FAM3D (ENSGFOG00000004969) ##22	FAM107A (ENSGFOG00000004992)	ACOX2 (ENSGFOG00000004999)	KCTD6 (ENSGFOG00000005013)	PDHB (ENSGFOG00000005020)	PXK (ENSGFOG00000005061)	HTD2 (ENSGFOG00000006345)	ENSGFOG00000006354	PRKAR2A (ENSGFOG00000006375)	SLC25A20 (ENSGFOG00000006408)	ARIH2 (ENSGFOG00000006421)	ENSGFOG00000006429	P4HTM (ENSGFOG00000006438)	ENSGFOG00000006457	DALRD3 (ENSGFOG00000006460)	IMPDH2 (ENSGFOG00000006492)
Galloanserae	ANCESTRAL SPECIES	26	ENSGT00550000074950	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Anatidae	ANCESTRAL SPECIES	41	ENSGT00550000074950	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Duck	MODERN SPECIES	4	ENSAPLG00000027785	ADAMTS9 (ENSAPLG00000005973)	PRICKLE2 (ENSAPLG00000003962)	PSMD6 (ENSAPLG00000003464)	ATXN7 (ENSAPLG00000003397)	THOC7 (ENSAPLG00000003317)	SNTN (ENSAPLG00000003311)	SYNPR (ENSAPLG00000003065)	ENSAPLG00000002031 ##17	FEZF2 (ENSAPLG00000020979)	C3orf14 (ENSAPLG00000013146)	PTPRG (ENSAPLG00000012378)	ENSAPLG00000025191	ENSAPLG00000016636	CFAP20DC (ENSAPLG00000005403)	FAM3D (ENSAPLG00000005464) ##22	FAM107A (ENSAPLG00000005707)	ACOX2 (ENSAPLG00000005757)	KCTD6 (ENSAPLG00000005871)	ENSAPLG00000028332	PXK (ENSAPLG00000005874)	HTD2 (ENSAPLG00000006269)	RPP14 (ENSAPLG00000006272)	PRKAR2A (ENSAPLG00000006277)	SLC25A20 (ENSAPLG00000029472)	ARIH2 (ENSAPLG00000006502)	P4HTM (ENSAPLG00000006841)	ENSAPLG00000006785	WDR6 (ENSAPLG00000025697)	DALRD3 (ENSAPLG00000006918)	NDUFAF3 (ENSAPLG00000024636)
Pink-footed goose	MODERN SPECIES	91	ENSABRG00000004110	MAGI1 (ENSABRG00000003972)	ADAMTS9 (ENSABRG00000003094)	PRICKLE2 (ENSABRG00000003016)	PSMD6 (ENSABRG00000002968)	ATXN7 (ENSABRG00000002852)	THOC7 (ENSABRG00000002714)	SNTN (ENSABRG00000002685)	SYNPR (ENSABRG00000002616)	ENSABRG00000002463 ##17	FEZF2 (ENSABRG00000002354)	C3orf14 (ENSABRG00000002287)	PTPRG (ENSABRG00000001987)	FHIT (ENSABRG00000001781)	CFAP20DC (ENSABRG00000001177)	FAM3D (ENSABRG00000001014) ##22	FAM107A (ENSABRG00000000880)	ACOX2 (ENSABRG00000019321)	KCTD6 (ENSABRG00000019307)	ENSABRG00000019305	PXK (ENSABRG00000019000)	HTD2 (ENSABRG00000018916)	RPP14 (ENSABRG00000018912)	PRKAR2A (ENSABRG00000018891)	SLC25A20 (ENSABRG00000018818)	ARIH2 (ENSABRG00000018552)	ENSABRG00000018535	P4HTM (ENSABRG00000018510)	WDR6 (ENSABRG00000018507)	DALRD3 (ENSABRG00000018505)	NDUFAF3 (ENSABRG00000018501)
Phasianidae	ANCESTRAL SPECIES	16	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Phasianidae_b	ANCESTRAL SPECIES	16	ENSGT00550000074950	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Chicken	MODERN SPECIES	3	SLC25A26 (ENSGALG00010019297)	MAGI1 (ENSGALG00010020282)	ADAMTS9 (ENSGALG00010020246)	PRICKLE2 (ENSGALG00010020194)	PSMD6 (ENSGALG00010020179)	ATXN7 (ENSGALG00010020152)	THOC7 (ENSGALG00010020141)	SNTN (ENSGALG00010021119)	SYP (ENSGALG00010021113)	ENSGALG00010021078 ##17	FEZF2 (ENSGALG00010021054)	C12H3orf14 (ENSGALG00010021052)	PTPRG (ENSGALG00010021043)	FHIT (ENSGALG00010021016)	CFAP20DC (ENSGALG00010020986)	FAM3D (ENSGALG00010020958) ##22	FAM107A (ENSGALG00010020943)	ACOX2 (ENSGALG00010020920)	KCTD6 (ENSGALG00010020905)	PDHB (ENSGALG00010020900)	PXK (ENSGALG00010020880)	HTD2 (ENSGALG00010020806)	PRKAR2A (ENSGALG00010020764)	SLC25A20 (ENSGALG00010020754)	ARIH2 (ENSGALG00010020732)	ENSGALG00010020695	P4HTM (ENSGALG00010020684)	ENSGALG00010020670	DALRD3 (ENSGALG00010020657)	NDUFAF3 (ENSGALG00010020653)	IMPDH2 (ENSGALG00010020638)
Turkey	MODERN SPECIES	5	LRIG1 (ENSMGAG00000009269)	SLC25A26 (ENSMGAG00000009255)	MAGI1 (ENSMGAG00000009228)	ADAMTS9 (ENSMGAG00000009150)	PRICKLE2 (ENSMGAG00000009081)	PSMD6 (ENSMGAG00000009125)	ATXN7 (ENSMGAG00000009100)	THOC7 (ENSMGAG00000009059)	SNTN (ENSMGAG00000009047)	SYNPR (ENSMGAG00000009030)	ENSMGAG00000008911 ##17	C3orf14 (ENSMGAG00000008896)	PTPRG (ENSMGAG00000008850)	ENSMGAG00000021099	CFAP20DC (ENSMGAG00000008832)	FAM3D (ENSMGAG00000008819) ##22	FAM107A (ENSMGAG00000008795)	ACOX2 (ENSMGAG00000008748)	KCTD6 (ENSMGAG00000008746)	PDHB (ENSMGAG00000008428)	PXK (ENSMGAG00000008724)	RPP14 (ENSMGAG00000015512)	PRKAR2A (ENSMGAG00000008680)	SLC25A20 (ENSMGAG00000008643)	ARIH2 (ENSMGAG00000008587)	ENSMGAG00000008569	P4HTM (ENSMGAG00000008559)	ENSMGAG00000008550	DALRD3 (ENSMGAG00000008545)	NDUFAF3 (ENSMGAG00000019024)	IMPDH2 (ENSMGAG00000008504)
Japanese quail	MODERN SPECIES	3	SLC25A26 (ENSCJPG00005018055)	MAGI1 (ENSCJPG00005018045)	ADAMTS9 (ENSCJPG00005018038)	PRICKLE2 (ENSCJPG00005018037)	PSMD6 (ENSCJPG00005018035)	ATXN7 (ENSCJPG00005018034)	THOC7 (ENSCJPG00005018032)	SNTN (ENSCJPG00005018031)	SYNPR (ENSCJPG00005018030)	ENSCJPG00005016828 ##17	FEZF2 (ENSCJPG00005016825)	C3orf14 (ENSCJPG00005016824)	PTPRG (ENSCJPG00005016823)	ENSCJPG00005016819	CFAP20DC (ENSCJPG00005016809)	FAM3D (ENSCJPG00005016808) ##22	FAM107A (ENSCJPG00005016807)	ACOX2 (ENSCJPG00005016806)	KCTD6 (ENSCJPG00005016805)	PDHB (ENSCJPG00005016804)	PXK (ENSCJPG00005016803)	HTD2 (ENSCJPG00005016802)	RPP14 (ENSCJPG00005016801)	PRKAR2A (ENSCJPG00005016800)	SLC25A20 (ENSCJPG00005016799)	ARIH2 (ENSCJPG00005016745)	ENSCJPG00005016744	P4HTM (ENSCJPG00005016743)	WDR6 (ENSCJPG00005016742)	DALRD3 (ENSCJPG00005016741)	NDUFAF3 (ENSCJPG00005016740)
Australian saltwater crocodile	MODERN SPECIES	37	MAGI1 (ENSCPRG00005015934)	ADAMTS9 (ENSCPRG00005016132)	PRICKLE2 (ENSCPRG00005016258)	ENSCPRG00005016274	PSMD6 (ENSCPRG00005016279)	ATXN7 (ENSCPRG00005016288)	THOC7 (ENSCPRG00005016300)	SNTN (ENSCPRG00005016304)	SYNPR (ENSCPRG00005016305)	ENSCPRG00005016336 ##17	C3orf14 (ENSCPRG00005016434)	PTPRG (ENSCPRG00005016446)	ENSCPRG00005016492	ENSCPRG00005016496	ENSCPRG00005016504	FAM3D (ENSCPRG00005016509) ##22	FAM107A (ENSCPRG00005016515)	ACOX2 (ENSCPRG00005016518)	KCTD6 (ENSCPRG00005016528)	PDHB (ENSCPRG00005016540)	PXK (ENSCPRG00005016582)	RPP14 (ENSCPRG00005016588)	HTD2 (ENSCPRG00005016591)	PRKAR2A (ENSCPRG00005016598)	SLC25A20 (ENSCPRG00005016620)	ARIH2 (ENSCPRG00005016670)	P4HTM (ENSCPRG00005016677)	ENSCPRG00005016694	ENSCPRG00005016706	DALRD3 (ENSCPRG00005016712)	NDUFAF3 (ENSCPRG00005016718)
Cryptodira	ANCESTRAL SPECIES	17	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048.w	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Emydidae	ANCESTRAL SPECIES	13	ENSGT00940000166512	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048.w	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
painted turtle	MODERN SPECIES	847															CFAP20DC (ENSCPBG00000003664)	FAM3D (ENSCPBG00000003743) ##22	FAM107A (ENSCPBG00000003768)	ACOX2 (ENSCPBG00000003787)	KCTD6 (ENSCPBG00000003806)	PDHB (ENSCPBG00000003822)	PXK (ENSCPBG00000003869)	HTD2 (ENSCPBG00000003897)	PRKAR2A (ENSCPBG00000003911)	SLC25A20 (ENSCPBG00000003921)	ARIH2 (ENSCPBG00000003938)	ENSCPBG00000003958	P4HTM (ENSCPBG00000003969)	WDR6 (ENSCPBG00000003992)	DALRD3 (ENSCPBG00000004002)	NDUFAF3 (ENSCPBG00000004053)	IMPDH2 (ENSCPBG00000004204)
Three-toed box turtle	MODERN SPECIES	33	MAGI1 (ENSTMTG00000016802)	ADAMTS9 (ENSTMTG00000014575)	PRICKLE2 (ENSTMTG00000014312)	PSMD6 (ENSTMTG00000014295)	ATXN7 (ENSTMTG00000014272)	THOC7 (ENSTMTG00000014251)	SNTN (ENSTMTG00000014239)	SYNPR (ENSTMTG00000014199)	ENSTMTG00000014140 ##17	ENSTMTG00000014120 ##17	FEZF2 (ENSTMTG00000014109)	C3orf14 (ENSTMTG00000014098)	PTPRG (ENSTMTG00000014069)	ENSTMTG00000014048	CFAP20DC (ENSTMTG00000014034)	FAM3D (ENSTMTG00000013998) ##22	FAM107A (ENSTMTG00000006131)	ACOX2 (ENSTMTG00000006059)	KCTD6 (ENSTMTG00000006036)	PDHB (ENSTMTG00000006005)	PXK (ENSTMTG00000005961)	HTD2 (ENSTMTG00000005947)	RPP14 (ENSTMTG00000005929)	PRKAR2A (ENSTMTG00000005904)	SLC25A20 (ENSTMTG00000005880)	ARIH2 (ENSTMTG00000005683)	ENSTMTG00000005631	P4HTM (ENSTMTG00000005581)	WDR6 (ENSTMTG00000005555)	NDUFAF3 (ENSTMTG00000005544)	ENSTMTG00000005518
Testudinidae	ANCESTRAL SPECIES	5	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00950000185997	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048.w	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00940000154836	ENSGT00940000157863	ENSGT00940000154875	ENSGT00940000164203	ENSGT00390000014570	ENSGT00420000029923	ENSGT00390000014621	ENSGT00390000018312
Abingdon island giant tortoise	MODERN SPECIES	821									ENSCABG00000019762 ##17	FEZF2 (ENSCABG00000019759)	C3orf14 (ENSCABG00000019756)	ENSCABG00000019749	ENSCABG00000019744	ENSCABG00000019742	ENSCABG00000019739	FAM3D (ENSCABG00000019737) ##22	FAM107A (ENSCABG00000019735)	ACOX2 (ENSCABG00000019734)	KCTD6 (ENSCABG00000019733)	PDHB (ENSCABG00000019731)	PXK (ENSCABG00000019729)	HTD2 (ENSCABG00000019728)	RPP14 (ENSCABG00000019727)	PRKAR2A (ENSCABG00000019726)	SLC25A20 (ENSCABG00000019725)	ARIH2 (ENSCABG00000019724)	ENSCABG00000019723	P4HTM (ENSCABG00000019717)	WDR6 (ENSCABG00000019716)	ENSCABG00000019715	ENSCABG00000019714
Goode s thornscrub tortoise	MODERN SPECIES	21	ADAMTS9 (ENSGEVG00005006238)	PRICKLE2 (ENSGEVG00005007020)	PSMD6 (ENSGEVG00005007090)	ATXN7 (ENSGEVG00005007114)	THOC7 (ENSGEVG00005007138)	ENSGEVG00005007158	ENSGEVG00005007182	SYNPR (ENSGEVG00005007208)	ENSGEVG00005007302 ##17	ENSGEVG00005007389 ##17	FEZF2 (ENSGEVG00005007428)	C3orf14 (ENSGEVG00005007456)	PTPRG (ENSGEVG00005007503)	ENSGEVG00005007656	CFAP20DC (ENSGEVG00005007712)	FAM3D (ENSGEVG00005007833) ##22	FAM107A (ENSGEVG00005008090)	ACOX2 (ENSGEVG00005008113)	KCTD6 (ENSGEVG00005008209)	PDHB (ENSGEVG00005008227)	PXK (ENSGEVG00005008278)	HTD2 (ENSGEVG00005008441)	RPP14 (ENSGEVG00005008471)	PRKAR2A (ENSGEVG00005008524)	SLC25A20 (ENSGEVG00005008545)	ARIH2 (ENSGEVG00005008565)	P4HTM (ENSGEVG00005008597)	ENSGEVG00005008651	WDR6 (ENSGEVG00005008674)	DALRD3 (ENSGEVG00005008702)	NDUFAF3 (ENSGEVG00005008759)
Chinese turtle	MODERN SPECIES	1322								ENSPSIG00000009763 ##17	FEZF2 (ENSPSIG00000009757)	C3orf14 (ENSPSIG00000009749)	PTPRG (ENSPSIG00000007338)	ENSPSIG00000000982	FHIT (ENSPSIG00000007319)	ENSPSIG00000000970	CFAP20DC (ENSPSIG00000006406)	FAM3D (ENSPSIG00000006380) ##22	ENSPSIG00000006377	ACOX2 (ENSPSIG00000005738)	KCTD6 (ENSPSIG00000005628)	PDHB (ENSPSIG00000005492)	PXK (ENSPSIG00000005046)	HTD2 (ENSPSIG00000005016)	RPP14 (ENSPSIG00000017212)	PRKAR2A (ENSPSIG00000017020)	ENSPSIG00000016872	KANK4 (ENSPSIG00000016625)	USP1 (ENSPSIG00000016572)	ANGPTL3 (ENSPSIG00000016440)	DOCK7 (ENSPSIG00000013971)	ATG4C (ENSPSIG00000013481)
Mammalia	ANCESTRAL SPECIES	18	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Theria	ANCESTRAL SPECIES	28	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Marsupialia	ANCESTRAL SPECIES	14	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.c	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00950000182965.a.b.b.a.a.a.a.b.b	ENSGT00940000163977	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Marsupialia_b	ANCESTRAL SPECIES	14	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.c	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00950000182965.a.b.b.a.a.a.a.b.b	ENSGT00940000163977	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Diprotodontia	ANCESTRAL SPECIES	12	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.c	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00950000182965.a.b.b.a.a.a.a.b.b	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Diprotodontia_a	ANCESTRAL SPECIES	10	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.c	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00950000182965.a.b.b.a.a.a.a.b.b	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109.o	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Common wonbat	MODERN SPECIES	1012	PRICKLE2 (ENSVURG00010006134)	PSMD6 (ENSVURG00010006048)	ATXN7 (ENSVURG00010006027)	ENSVURG00010006017	C3orf49 (ENSVURG00010005993)	SNTN (ENSVURG00010005958)	SYNPR (ENSVURG00010005907)	ENSVURG00010005137 ##17	FEZF2 (ENSVURG00010005007)	ENSVURG00010004992	PTPRG (ENSVURG00010004969)	ENSVURG00010004856	ENSVURG00010004808	ENSVURG00010004775	CFAP20DC (ENSVURG00010004687)	FAM3D (ENSVURG00010004538) ##22	FAM107A (ENSVURG00010004527)	ACOX2 (ENSVURG00010004517)	KCTD6 (ENSVURG00010004491)	PDHB (ENSVURG00010004455)	PXK (ENSVURG00010004160)	ENSVURG00010004130	RPP14 (ENSVURG00010004122)	ABHD6 (ENSVURG00010004113)	DNASE1L3 (ENSVURG00010004073)	ENSVURG00010004062	FLNB (ENSVURG00010003968)	SLMAP (ENSVURG00010003817)	DENND6A (ENSVURG00010003576)	ARF4 (ENSVURG00010003521)	PDE12 (ENSVURG00010003514)
koala	MODERN SPECIES	188															CFAP20DC (ENSPCIG00000025056)	FAM3D (ENSPCIG00000000098) ##22	FAM107A (ENSPCIG00000007678)	ACOX2 (ENSPCIG00000007680)	KCTD6 (ENSPCIG00000007688)	ENSPCIG00000007692	ENSPCIG00000007710	ENSPCIG00000007714	PXK (ENSPCIG00000007705)	ABHD6 (ENSPCIG00000007724)	DNASE1L3 (ENSPCIG00000012796)	ENSPCIG00000012798	FLNB (ENSPCIG00000013209)	ENSPCIG00000027327	DENND6A (ENSPCIG00000027324)	ARF4 (ENSPCIG00000027320)	PDE12 (ENSPCIG00000035850)
Wallaby	MODERN SPECIES	9913																ENSMEUG00000001236 ##22
Tasmanian devil	MODERN SPECIES		ADAMTS9 (ENSSHAG00000014822)	PRICKLE2 (ENSSHAG00000013056)	PSMD6 (ENSSHAG00000012357)	ATXN7 (ENSSHAG00000012231)	THOC7 (ENSSHAG00000011615)	C3orf49 (ENSSHAG00000011430)	SNTN (ENSSHAG00000009729)	SYNPR (ENSSHAG00000030353)	ENSSHAG00000018442 ##17	FEZF2 (ENSSHAG00000027636)	ENSSHAG00000018343	PTPRG (ENSSHAG00000017902)	ENSSHAG00000022090	FHIT (ENSSHAG00000030893)	CFAP20DC (ENSSHAG00000005793)	FAM3D (ENSSHAG00000003169) ##22	ENSSHAG00000024622	ACOX2 (ENSSHAG00000009080)	KCTD6 (ENSSHAG00000024301)	PDHB (ENSSHAG00000030926)	HTD2 (ENSSHAG00000029328)	PXK (ENSSHAG00000007751)	RPP14 (ENSSHAG00000031484)	ABHD6 (ENSSHAG00000007204)	DNASE1L3 (ENSSHAG00000006068)	ENSSHAG00000026769	FLNB (ENSSHAG00000004199)	SLMAP (ENSSHAG00000017695)	DENND6A (ENSSHAG00000023281)	ENSSHAG00000021291	PDE12 (ENSSHAG00000029640)
Opossum	MODERN SPECIES	5	ATXN7 (ENSMODG00000025517)	ENSMODG00000003009	C3orf49 (ENSMODG00000002989)	SNTN (ENSMODG00000050561)	SYNPR (ENSMODG00000002954)	ENSMODG00000039038	CADPS (ENSMODG00000002901)	FEZF2 (ENSMODG00000002738)	ENSMODG00000025512	PTPRG (ENSMODG00000002722)	ENSMODG00000049978	ENSMODG00000002580	ENSMODG00000024453	ENSMODG00000029766	CFAP20DC (ENSMODG00000002419)	FAM3D (ENSMODG00000002406) ##22	KCTD6 (ENSMODG00000048497)	PDHB (ENSMODG00000002398)	PXK (ENSMODG00000002378)	HTD2 (ENSMODG00000041764)	RPP14 (ENSMODG00000002344)	ABHD6 (ENSMODG00000002333)	DNASE1L3 (ENSMODG00000002269)	ENSMODG00000028639	FLNB (ENSMODG00000002189)	SLMAP (ENSMODG00000000227)	DENND6A (ENSMODG00000000204)	ARF4 (ENSMODG00000037451)	PDE12 (ENSMODG00000037969)	DNAH12 (ENSMODG00000024484)	ASB14 (ENSMODG00000000105)
Eutheria	ANCESTRAL SPECIES	14	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Atlantogenata	ANCESTRAL SPECIES	56	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Xenarthra	ANCESTRAL SPECIES	1197															ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985
Armadillo	MODERN SPECIES	3713															CFAP20DC (ENSDNOG00000014788)	FAM3D (ENSDNOG00000010772) ##22	FAM107A (ENSDNOG00000016301)	ACOX2 (ENSDNOG00000017022)
Sloth	MODERN SPECIES	7402																FAM3D (ENSCHOG00000001524) ##22
Afrotheria	ANCESTRAL SPECIES	63	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280	ENSGT00940000156550
Tenrec	MODERN SPECIES	16209																FAM3D (ENSETEG00000010347) ##22
Afrotheria_a	ANCESTRAL SPECIES	61	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280	ENSGT00940000156550
Hyrax	MODERN SPECIES	6981																FAM3D (ENSPCAG00000004137) ##22
Elephant	MODERN SPECIES	49	MAGI1 (ENSLAFG00000018125)	ADAMTS9 (ENSLAFG00000011498)	PRICKLE2 (ENSLAFG00000000039)	PSMD6 (ENSLAFG00000000036)	ENSLAFG00000032573	THOC7 (ENSLAFG00000001987)	ENSLAFG00000010388	SYNPR (ENSLAFG00000018746)	CADPS (ENSLAFG00000010539)	FEZF2 (ENSLAFG00000022425)	C3orf14 (ENSLAFG00000010537)	PTPRG (ENSLAFG00000015768)	ENSLAFG00000004111	ENSLAFG00000030021	CFAP20DC (ENSLAFG00000009835)	FAM3D (ENSLAFG00000003733) ##22	FAM107A (ENSLAFG00000027601)	ACOX2 (ENSLAFG00000027265)	KCTD6 (ENSLAFG00000022622)	PDHB (ENSLAFG00000002931)	PXK (ENSLAFG00000002929)	RPP14 (ENSLAFG00000031481)	ABHD6 (ENSLAFG00000016818)	DNASE1L3 (ENSLAFG00000006296)	FLNB (ENSLAFG00000006278)	SLMAP (ENSLAFG00000000245)	DENND6A (ENSLAFG00000003914)	ARF4 (ENSLAFG00000006203)	PDE12 (ENSLAFG00000002821)	DNAH12 (ENSLAFG00000014308)	ASB14 (ENSLAFG00000014301)
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Suina	ANCESTRAL SPECIES	1	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Chacoan peccary	MODERN SPECIES	950	PRICKLE2 (ENSCWAG00000014815)	PSMD6 (ENSCWAG00000014720)	ATXN7 (ENSCWAG00000014420)	THOC7 (ENSCWAG00000014303)	C3orf49 (ENSCWAG00000014198)	SNTN (ENSCWAG00000014159)	SYNPR (ENSCWAG00000013911)	CADPS (ENSCWAG00000012263)	FEZF2 (ENSCWAG00000012160)	C3orf14 (ENSCWAG00000012118)	PTPRG (ENSCWAG00000012014)	FHIT (ENSCWAG00000011930)	ENSCWAG00000011875	ENSCWAG00000011856	ENSCWAG00000021841	FAM3D (ENSCWAG00000021839) ##22	FAM107A (ENSCWAG00000021832)	ACOX2 (ENSCWAG00000021819)	KCTD6 (ENSCWAG00000021815)	PDHB (ENSCWAG00000021808)	PXK (ENSCWAG00000021686)	HTD2 (ENSCWAG00000021674)	RPP14 (ENSCWAG00000021672)	ABHD6 (ENSCWAG00000021669)	DNASE1L3 (ENSCWAG00000021660)	FLNB (ENSCWAG00000021626)	SLMAP (ENSCWAG00000021268)	DENND6A (ENSCWAG00000021152)	ARF4 (ENSCWAG00000021124)	PDE12 (ENSCWAG00000021116)	ENSCWAG00000021108
Pig	MODERN SPECIES	4	PSMD6 (ENSSSCG00000011494)	ATXN7 (ENSSSCG00000011493)	THOC7 (ENSSSCG00000011491)	C3orf49 (ENSSSCG00000011490)	SNTN (ENSSSCG00000011492)	SYNPR (ENSSSCG00000027617)	ENSSSCG00000011489 ##17	FEZF2 (ENSSSCG00000011487)	C3orf14 (ENSSSCG00000011486)	PTPRG (ENSSSCG00000011485)	ENSSSCG00000054111	ENSSSCG00000050599	FHIT (ENSSSCG00000035818)	ENSSSCG00000042396	CFAP20DC (ENSSSCG00000011482)	ENSSSCG00000033189 ##22	ACOX2 (ENSSSCG00000011477)	KCTD6 (ENSSSCG00000022131)	PDHB (ENSSSCG00000025881)	PXK (ENSSSCG00000011474)	HTD2 (ENSSSCG00000035452)	ABHD6 (ENSSSCG00000011470)	DNASE1L3 (ENSSSCG00000032019)	FLNB (ENSSSCG00000011471)	SLMAP (ENSSSCG00000038873)	DENND6A (ENSSSCG00000011467)	ARF4 (ENSSSCG00000031791)	PDE12 (ENSSSCG00000011465)	DNAH12 (ENSSSCG00000020990)	ASB14 (ENSSSCG00000035320)	APPL1 (ENSSSCG00000032357)
Artiodactyla_a	ANCESTRAL SPECIES	18	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Camelidae	ANCESTRAL SPECIES	7	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Arabian camel	MODERN SPECIES	8	ADAMTS9 (ENSCDRG00005020777)	PRICKLE2 (ENSCDRG00005020751)	PSMD6 (ENSCDRG00005020711)	ATXN7 (ENSCDRG00005020697)	THOC7 (ENSCDRG00005020683)	C3orf49 (ENSCDRG00005020674)	SNTN (ENSCDRG00005020668)	SYNPR (ENSCDRG00005020648)	ENSCDRG00005020523 ##17	FEZF2 (ENSCDRG00005020488)	C3orf14 (ENSCDRG00005020482)	ENSCDRG00005020465	PTPRG (ENSCDRG00005020404)	FHIT (ENSCDRG00005020377)	CFAP20DC (ENSCDRG00005020351)	FAM3D (ENSCDRG00005020324) ##22	FAM107A (ENSCDRG00005020301)	ACOX2 (ENSCDRG00005020282)	KCTD6 (ENSCDRG00005020274)	PDHB (ENSCDRG00005020239)	PXK (ENSCDRG00005019326)	HTD2 (ENSCDRG00005019248)	RPP14 (ENSCDRG00005019234)	ABHD6 (ENSCDRG00005019209)	ENSCDRG00005019192	DNASE1L3 (ENSCDRG00005019156)	FLNB (ENSCDRG00005018788)	SLMAP (ENSCDRG00005018160)	DENND6A (ENSCDRG00005017935)	ARF4 (ENSCDRG00005017832)	PDE12 (ENSCDRG00005017801)
Artiodactyla_b	ANCESTRAL SPECIES	21	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Pecora	ANCESTRAL SPECIES	17	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a.p ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121.i	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Yarkand deer	MODERN SPECIES	16	PSMD6 (ENSCHYG00000016855)	ATXN7 (ENSCHYG00000016316)	THOC7 (ENSCHYG00000016054)	C3orf49 (ENSCHYG00000015763)	ENSCHYG00000015619	SYNPR (ENSCHYG00000015063)	ENSCHYG00000014745 ##17	ENSCHYG00000014655 ##17	FEZF2 (ENSCHYG00000014589)	C3orf14 (ENSCHYG00000014502)	PTPRG (ENSCHYG00000013912)	ENSCHYG00000013777	FHIT (ENSCHYG00000027057)	ENSCHYG00000027054	CFAP20DC (ENSCHYG00000027019)	FAM3D (ENSCHYG00000026999) ##22	FAM107A (ENSCHYG00000026993)	ACOX2 (ENSCHYG00000026985)	KCTD6 (ENSCHYG00000026981)	PDHB (ENSCHYG00000026973)	PXK (ENSCHYG00000026930)	ENSCHYG00000026897	ENSCHYG00000026894	ABHD6 (ENSCHYG00000026878)	DNASE1L3 (ENSCHYG00000026838)	ENSCHYG00000026831	FLNB (ENSCHYG00000026471)	SLMAP (ENSCHYG00000026352)	DENND6A (ENSCHYG00000026288)	ARF4 (ENSCHYG00000026250)	ENSCHYG00000026238
Percora_a	ANCESTRAL SPECIES	19	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a.p ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121.i	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Siberian musk deer	MODERN SPECIES	1221									ENSMMSG00000018917 ##17	FEZF2 (ENSMMSG00000018876)	C3orf14 (ENSMMSG00000018848)	ENSMMSG00000018833	PTPRG (ENSMMSG00000018405)	FHIT (ENSMMSG00000018323)	CFAP20DC (ENSMMSG00000018150)	FAM3D (ENSMMSG00000018088) ##22	FAM107A (ENSMMSG00000017997)	ACOX2 (ENSMMSG00000017804)	KCTD6 (ENSMMSG00000017765)	PDHB (ENSMMSG00000017687)	PXK (ENSMMSG00000017258)	HTD2 (ENSMMSG00000017200)	ENSMMSG00000017169	ABHD6 (ENSMMSG00000017116)	DNASE1L3 (ENSMMSG00000017047)	FLNB (ENSMMSG00000016309)	SLMAP (ENSMMSG00000015387)	DENND6A (ENSMMSG00000015208)	ARF4 (ENSMMSG00000015121)	PDE12 (ENSMMSG00000015099)	ENSMMSG00000015088
Bovidae	ANCESTRAL SPECIES	19	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a.p ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109.g	ENSGT00510000048121.i	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Caprinae	ANCESTRAL SPECIES	15	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a.p ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109.g	ENSGT00510000048121.i	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Goat	MODERN SPECIES	14	PSMD6 (ENSCHIG00000024309)	ATXN7 (ENSCHIG00000023713)	THOC7 (ENSCHIG00000018603)	C3orf49 (ENSCHIG00000024382)	SNTN (ENSCHIG00000013587)	SYNPR (ENSCHIG00000026328)	ENSCHIG00000019114	ENSCHIG00000016893 ##17	ENSCHIG00000014909 ##17	FEZF2 (ENSCHIG00000011964)	C3orf14 (ENSCHIG00000016342)	PTPRG (ENSCHIG00000017497)	ENSCHIG00000010336	ENSCHIG00000016747	CFAP20DC (ENSCHIG00000010846)	FAM3D (ENSCHIG00000010042) ##22	FAM107A (ENSCHIG00000001759)	ACOX2 (ENSCHIG00000014174)	KCTD6 (ENSCHIG00000014901)	ENSCHIG00000012102	PXK (ENSCHIG00000024839)	ENSCHIG00000012688	RPP14 (ENSCHIG00000019415)	ABHD6 (ENSCHIG00000013660)	DNASE1L3 (ENSCHIG00000022130)	FLNB (ENSCHIG00000015995)	SLMAP (ENSCHIG00000009299)	ENSCHIG00000023598	DENND6A (ENSCHIG00000010103)	ENSCHIG00000017997	PDE12 (ENSCHIG00000014202)
Rambouillet Sheep	MODERN SPECIES	10	ADAMTS9 (ENSOARG00020024236)	PRICKLE2 (ENSOARG00020024549)	PSMD6 (ENSOARG00020024605)	ATXN7 (ENSOARG00020024681)	THOC7 (ENSOARG00020024776)	C3orf49 (ENSOARG00020024817)	SNTN (ENSOARG00020024841)	SYNPR (ENSOARG00020024871)	ENSOARG00020024987 ##17	FEZF2 (ENSOARG00020025251)	C3orf14 (ENSOARG00020025268)	PTPRG (ENSOARG00020025302)	ENSOARG00020025360	FHIT (ENSOARG00020025365)	ENSOARG00020025372	FAM3D (ENSOARG00020025418) ##22	FAM107A (ENSOARG00020025461)	ACOX2 (ENSOARG00020025478)	KCTD6 (ENSOARG00020025501)	ENSOARG00020025507	PDHB (ENSOARG00020025513)	PXK (ENSOARG00020025560)	RPP14 (ENSOARG00020025646)	ABHD6 (ENSOARG00020025651)	DNASE1L3 (ENSOARG00020010174)	FLNB (ENSOARG00020010340)	SLMAP (ENSOARG00020011836)	DENND6A (ENSOARG00020016911)	ARF4 (ENSOARG00020017072)	PDE12 (ENSOARG00020017185)	DNAH12 (ENSOARG00020017219)
Bovinae	ANCESTRAL SPECIES	16	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a.p ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109.g	ENSGT00510000048121.i	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297.g	ENSGT00940000157205	ENSGT00940000154280
American bison	MODERN SPECIES	3218	PRICKLE2 (ENSBBBG00000020897)	PSMD6 (ENSBBBG00000008784)	ATXN7 (ENSBBBG00000005611)	ENSBBBG00000020811	C3orf49 (ENSBBBG00000020799)	SNTN (ENSBBBG00000020783)	SYNPR (ENSBBBG00000020682)	CADPS (ENSBBBG00000008952)	FEZF2 (ENSBBBG00000000567)	C3orf14 (ENSBBBG00000000579)	PTPRG (ENSBBBG00000000590)	ENSBBBG00000000706	FHIT (ENSBBBG00000020412)	ENSBBBG00000020400	ENSBBBG00000020395	FAM3D (ENSBBBG00000020387) ##22	FAM107A (ENSBBBG00000020372)	ACOX2 (ENSBBBG00000020341)	KCTD6 (ENSBBBG00000020309)	PDHB (ENSBBBG00000020298)	PXK (ENSBBBG00000020262)	HTD2 (ENSBBBG00000005419)	RPP14 (ENSBBBG00000020021)	ABHD6 (ENSBBBG00000020006)	DNASE1L3 (ENSBBBG00000019985)	FLNB (ENSBBBG00000019924)	SLMAP (ENSBBBG00000019320)	DENND6A (ENSBBBG00000019102)	ARF4 (ENSBBBG00000004889)	PDE12 (ENSBBBG00000019061)	DNAH12 (ENSBBBG00000008659)
Bos	ANCESTRAL SPECIES	16	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a.p ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109.g	ENSGT00510000048121.i	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297.g	ENSGT00940000157205	ENSGT00940000154280
Bos_b	ANCESTRAL SPECIES	17	ENSGT00510000046608.B	ENSGT01100000263511.b.a.b.a.b.a.b.b.a.b.a.b.a.a.b.a.b	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a.p ##17	ENSGT00950000183306	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00510000048121.i	ENSGT00530000065109.g	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297.g	ENSGT00940000157205	ENSGT00390000007133.ib.b
Cow	MODERN SPECIES	14	PRICKLE2 (ENSBTAG00000021835)	PSMD6 (ENSBTAG00000015112)	ENSBTAG00000052900	ATXN7 (ENSBTAG00000011287)	THOC7 (ENSBTAG00000032872)	C22H3orf49 (ENSBTAG00000039133)	SNTN (ENSBTAG00000013026)	SYNPR (ENSBTAG00000000265)	CADPS (ENSBTAG00000005321)	FEZF2 (ENSBTAG00000020302)	C22H3orf14 (ENSBTAG00000001889)	PTPRG (ENSBTAG00000021911)	ENSBTAG00000051322	FHIT (ENSBTAG00000014418)	CFAP20DC (ENSBTAG00000020373)	FAM3D (ENSBTAG00000023207) ##22	FAM107A (ENSBTAG00000046763)	ACOX2 (ENSBTAG00000004178)	KCTD6 (ENSBTAG00000022656)	PDHB (ENSBTAG00000021724)	PXK (ENSBTAG00000019989)	RPP14 (ENSBTAG00000019987)	ABHD6 (ENSBTAG00000016615)	ENSBTAG00000048746	DNASE1L3 (ENSBTAG00000018294)	FLNB (ENSBTAG00000022004)	SLMAP (ENSBTAG00000021164)	DENND6A (ENSBTAG00000018433)	ARF4 (ENSBTAG00000016069)	PDE12 (ENSBTAG00000015563)	DNAH12 (ENSBTAG00000020802)
Hybrid Bos Indicus	MODERN SPECIES	14	ATXN7 (ENSBIXG00005031097)	THOC7 (ENSBIXG00005031087)	SNTN (ENSBIXG00005031067)	SYNPR (ENSBIXG00005031052)	ENSBIXG00005030983 ##17	ENSBIXG00005030940	FEZF2 (ENSBIXG00005030934)	C3orf14 (ENSBIXG00005030927)	ENSBIXG00005030923	ENSBIXG00005030920	PTPRG (ENSBIXG00005030859)	ENSBIXG00005030817	ENSBIXG00005030814	FHIT (ENSBIXG00005030806)	CFAP20DC (ENSBIXG00005030757)	FAM3D (ENSBIXG00005030732) ##22	FAM107A (ENSBIXG00005030714)	ACOX2 (ENSBIXG00005030705)	KCTD6 (ENSBIXG00005030695)	ENSBIXG00005030689	PDHB (ENSBIXG00005030678)	PXK (ENSBIXG00005030611)	ENSBIXG00005030552	ENSBIXG00005030516	ENSBIXG00005030495	DNASE1L3 (ENSBIXG00005030486)	FLNB (ENSBIXG00005030379)	ENSBIXG00005030348	SLMAP (ENSBIXG00005030294)	DENND6A (ENSBIXG00005030234)	ARF4 (ENSBIXG00005030221)
Bos_a	ANCESTRAL SPECIES	9	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a.p ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00950000185179	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109.g	ENSGT00510000048121.i	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297.g	ENSGT00940000157205	ENSGT00940000154280
Wild yak	MODERN SPECIES	1052														ENSBMUG00000002992	ENSBMUG00000003014	ENSBMUG00000003136 ##22	FAM107A (ENSBMUG00000003190)	ACOX2 (ENSBMUG00000003218)	KCTD6 (ENSBMUG00000003255)	PDHB (ENSBMUG00000003293)	PXK (ENSBMUG00000003636)	ENSBMUG00000003871	RPP14 (ENSBMUG00000003878)	ABHD6 (ENSBMUG00000003911)	DNASE1L3 (ENSBMUG00000003952)	FLNB (ENSBMUG00000004321)	SLMAP (ENSBMUG00000005116)	ENSBMUG00000005515	DENND6A (ENSBMUG00000005528)
Domestic yak	MODERN SPECIES	14	ENSBGRG00000026614	SNTN (ENSBGRG00000026611)	SYNPR (ENSBGRG00000026605)	ENSBGRG00000026531 ##17	FEZF2 (ENSBGRG00000026510)	C3orf14 (ENSBGRG00000026503)	ENSBGRG00000026498	PTPRG (ENSBGRG00000026439)	ENSBGRG00000026428	ENSBGRG00000026423	ENSBGRG00000026422	ENSBGRG00000026418	ENSBGRG00000026413	FHIT (ENSBGRG00000026409)	CFAP20DC (ENSBGRG00000026346)	FAM3D (ENSBGRG00000026326) ##22	ENSBGRG00000026305	ACOX2 (ENSBGRG00000026285)	KCTD6 (ENSBGRG00000026274)	PDHB (ENSBGRG00000026264)	PXK (ENSBGRG00000026115)	ENSBGRG00000026079	ENSBGRG00000026068	ABHD6 (ENSBGRG00000026051)	DNASE1L3 (ENSBGRG00000025974)	FLNB (ENSBGRG00000025399)	SLMAP (ENSBGRG00000024830)	DENND6A (ENSBGRG00000024720)	ARF4 (ENSBGRG00000024665)	PDE12 (ENSBGRG00000024632)	DNAH12 (ENSBGRG00000023549)
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.z.a.a	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.z.a.b	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.z.a.b	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Dolphin	MODERN SPECIES	1714																ENSTTRG00000013753 ##22	FAM107A (ENSTTRG00000013752)	ACOX2 (ENSTTRG00000013751)	KCTD6 (ENSTTRG00000013750)
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.z.a.b	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00550000074840.y.a.d	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669.a	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.z.a.b	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00550000074840.y.a.d	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669.a	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Narwhal	MODERN SPECIES	310	PRICKLE2 (ENSMMNG00015018213)	PSMD6 (ENSMMNG00015018161)	ATXN7 (ENSMMNG00015017959)	THOC7 (ENSMMNG00015017848)	C3orf49 (ENSMMNG00015017811)	ENSMMNG00015017780	SYNPR (ENSMMNG00015017647)	ENSMMNG00015017570	CADPS (ENSMMNG00015016924)	FEZF2 (ENSMMNG00015016721)	C3orf14 (ENSMMNG00015016683)	PTPRG (ENSMMNG00015016625)	ENSMMNG00015016567	FHIT (ENSMMNG00015016528)	CFAP20DC (ENSMMNG00015016237)	FAM3D (ENSMMNG00015016132) ##22	FAM107A (ENSMMNG00015016044)	ACOX2 (ENSMMNG00015015878)	KCTD6 (ENSMMNG00015016469)	PDHB (ENSMMNG00015016377)	ENSMMNG00015015792	HTD2 (ENSMMNG00015015587)	RPP14 (ENSMMNG00015015570)	ABHD6 (ENSMMNG00015015546)	DNASE1L3 (ENSMMNG00015015517)	FLNB (ENSMMNG00015015248)	SLMAP (ENSMMNG00015014760)	DENND6A (ENSMMNG00015014587)	ARF4 (ENSMMNG00015014553)	PDE12 (ENSMMNG00015014538)	DNAH12 (ENSMMNG00015014412)
Beluga whale	MODERN SPECIES	28	PSMD6 (ENSDLEG00000012939)	ATXN7 (ENSDLEG00000012953)	ENSDLEG00000013022	C3orf49 (ENSDLEG00000013067)	ENSDLEG00000013084	SYNPR (ENSDLEG00000013106)	ENSDLEG00000013121	CADPS (ENSDLEG00000013182) ##17	FEZF2 (ENSDLEG00000013509)	CUNH3orf14 (ENSDLEG00000013515)	PTPRG (ENSDLEG00000013533)	ENSDLEG00000013657	ENSDLEG00000013683	ENSDLEG00000013694	CFAP20DC (ENSDLEG00000013720)	FAM3D (ENSDLEG00000013752) ##22	FAM107A (ENSDLEG00000013803)	ACOX2 (ENSDLEG00000013864)	KCTD6 (ENSDLEG00000014694)	PDHB (ENSDLEG00000014718)	ENSDLEG00000014951	HTD2 (ENSDLEG00000015394)	RPP14 (ENSDLEG00000015401)	ABHD6 (ENSDLEG00000015419)	DNASE1L3 (ENSDLEG00000015499)	FLNB (ENSDLEG00000003605)	SLMAP (ENSDLEG00000005203)	DENND6A (ENSDLEG00000006061)	ARF4 (ENSDLEG00000006152)	PDE12 (ENSDLEG00000006178)	DNAH12 (ENSDLEG00000006542)
Vaquita	MODERN SPECIES	2	PSMD6 (ENSPSNG00000015223)	ATXN7 (ENSPSNG00000015407)	THOC7 (ENSPSNG00000015780)	C3orf49 (ENSPSNG00000015853)	ENSPSNG00000015956	SYNPR (ENSPSNG00000016116)	ENSPSNG00000016417	CADPS (ENSPSNG00000016609)	FEZF2 (ENSPSNG00000017856)	C3orf14 (ENSPSNG00000017899)	PTPRG (ENSPSNG00000017965)	ENSPSNG00000018481	FHIT (ENSPSNG00000018518)	ENSPSNG00000018598	CFAP20DC (ENSPSNG00000018627)	FAM3D (ENSPSNG00000018707) ##22	FAM107A (ENSPSNG00000018991)	ACOX2 (ENSPSNG00000019095)	KCTD6 (ENSPSNG00000019141)	PDHB (ENSPSNG00000019176)	ENSPSNG00000019364	HTD2 (ENSPSNG00000019905)	ABHD6 (ENSPSNG00000019942)	DNASE1L3 (ENSPSNG00000020015)	FLNB (ENSPSNG00000020226)	SLMAP (ENSPSNG00000020431)	DENND6A (ENSPSNG00000020586)	ARF4 (ENSPSNG00000020627)	PDE12 (ENSPSNG00000020682)	DNAH12 (ENSPSNG00000020778)	ASB14 (ENSPSNG00000021183)
Sperm whale	MODERN SPECIES	1174																ENSPCTG00005014308 ##22
Blue whale	MODERN SPECIES	2	ENSBMSG00010015826	C3orf49 (ENSBMSG00010015790)	SNTN (ENSBMSG00010015768)	ENSBMSG00010015743	SYNPR (ENSBMSG00010015614)	CADPS (ENSBMSG00010014814)	FEZF2 (ENSBMSG00010014587)	C3orf14 (ENSBMSG00010014539)	PTPRG (ENSBMSG00010014239)	ENSBMSG00010014084	FHIT (ENSBMSG00010014004)	ENSBMSG00010013952	ENSBMSG00010013910	ENSBMSG00010013875	ENSBMSG00010013854	FAM3D (ENSBMSG00010010935) ##22	FAM107A (ENSBMSG00010010894)	ACOX2 (ENSBMSG00010010847)	KCTD6 (ENSBMSG00010010831)	PDHB (ENSBMSG00010010799)	PXK (ENSBMSG00010010621)	HTD2 (ENSBMSG00010010553)	ABHD6 (ENSBMSG00010010527)	DNASE1L3 (ENSBMSG00010010512)	FLNB (ENSBMSG00010010441)	SLMAP (ENSBMSG00010010185)	DENND6A (ENSBMSG00010010058)	ENSBMSG00010010012	PDE12 (ENSBMSG00010009980)	DNAH12 (ENSBMSG00010009860)	ASB14 (ENSBMSG00010009807)
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Felidae	ANCESTRAL SPECIES	17	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00950000185179	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Tiger	MODERN SPECIES	202	PSMD6 (ENSPTIG00000006635)	ATXN7 (ENSPTIG00000008113)	THOC7 (ENSPTIG00000010860)	C3orf49 (ENSPTIG00000011510)	SNTN (ENSPTIG00000011995)	SYNPR (ENSPTIG00000012400)	CADPS (ENSPTIG00000013364)	FEZF2 (ENSPTIG00000018609)	C3orf14 (ENSPTIG00000019782)	PTPRG (ENSPTIG00000019869)	ENSPTIG00000005591	ENSPTIG00000005768	FHIT (ENSPTIG00000006722)	ENSPTIG00000008176	ENSPTIG00000008509	FAM3D (ENSPTIG00000009620) ##22	FAM107A (ENSPTIG00000010190)	ACOX2 (ENSPTIG00000011237)	KCTD6 (ENSPTIG00000012043)	PDHB (ENSPTIG00000012719)	PXK (ENSPTIG00000016629)	HTD2 (ENSPTIG00000004999)	RPP14 (ENSPTIG00000020506)	ABHD6 (ENSPTIG00000020605)	DNASE1L3 (ENSPTIG00000020975)	FLNB (ENSPTIG00000001592)	SLMAP (ENSPTIG00000011558)	DENND6A (ENSPTIG00000018031)	ARF4 (ENSPTIG00000018850)	PDE12 (ENSPTIG00000019166)	DNAH12 (ENSPTIG00000019846)
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
leopard	MODERN SPECIES	57	PSMD6 (ENSPPRG00000005003)	ATXN7 (ENSPPRG00000004611)	ENSPPRG00000004069	THOC7 (ENSPPRG00000004022)	C3orf49 (ENSPPRG00000003956)	SNTN (ENSPPRG00000003698)	SYNPR (ENSPPRG00000003285)	ENSPPRG00000003102 ##17	ENSPPRG00000002698 ##17	FEZF2 (ENSPPRG00000001538)	C3orf14 (ENSPPRG00000000662)	PTPRG (ENSPPRG00000022761)	ENSPPRG00000023202	FHIT (ENSPPRG00000023211)	CFAP20DC (ENSPPRG00000023339)	FAM3D (ENSPPRG00000024157) ##22	FAM107A (ENSPPRG00000024198)	ACOX2 (ENSPPRG00000024320)	KCTD6 (ENSPPRG00000024342)	PDHB (ENSPPRG00000024464)	PXK (ENSPPRG00000024622)	HTD2 (ENSPPRG00000020475)	RPP14 (ENSPPRG00000019524)	ABHD6 (ENSPPRG00000019460)	DNASE1L3 (ENSPPRG00000018907)	FLNB (ENSPPRG00000017735)	SLMAP (ENSPPRG00000012264)	DENND6A (ENSPPRG00000011845)	ARF4 (ENSPPRG00000011774)	PDE12 (ENSPPRG00000011738)	DNAH12 (ENSPPRG00000011561)
lion	MODERN SPECIES	2	ADAMTS9 (ENSPLOG00000000956)	PRICKLE2 (ENSPLOG00000000862)	PSMD6 (ENSPLOG00000000825)	ATXN7 (ENSPLOG00000000770)	THOC7 (ENSPLOG00000000726)	C3orf49 (ENSPLOG00000000710)	SNTN (ENSPLOG00000000688)	SYNPR (ENSPLOG00000000626)	CADPS (ENSPLOG00000000293)	FEZF2 (ENSPLOG00000000192)	C3orf14 (ENSPLOG00000000186)	ENSPLOG00000000178	PTPRG (ENSPLOG00000000124)	FHIT (ENSPLOG00000009665)	CFAP20DC (ENSPLOG00000009506)	FAM3D (ENSPLOG00000009293) ##22	FAM107A (ENSPLOG00000009114)	ACOX2 (ENSPLOG00000008935)	KCTD6 (ENSPLOG00000008883)	PDHB (ENSPLOG00000008742)	PXK (ENSPLOG00000008543)	HTD2 (ENSPLOG00000008454)	RPP14 (ENSPLOG00000008418)	ABHD6 (ENSPLOG00000008364)	DNASE1L3 (ENSPLOG00000008238)	FLNB (ENSPLOG00000007173)	SLMAP (ENSPLOG00000006112)	DENND6A (ENSPLOG00000005683)	ARF4 (ENSPLOG00000005601)	PDE12 (ENSPLOG00000005551)	DNAH12 (ENSPLOG00000005462)
Cat	MODERN SPECIES	1	ADAMTS9 (ENSFCAG00000001564)	PRICKLE2 (ENSFCAG00000012183)	PSMD6 (ENSFCAG00000000573)	ATXN7 (ENSFCAG00000031292)	THOC7 (ENSFCAG00000023008)	C3orf49 (ENSFCAG00000000570)	SNTN (ENSFCAG00000003859)	SYNPR (ENSFCAG00000038136)	CADPS (ENSFCAG00000012727) ##17	FEZF2 (ENSFCAG00000012726)	C3orf14 (ENSFCAG00000045830)	ENSFCAG00000034355	PTPRG (ENSFCAG00000006340)	FHIT (ENSFCAG00000033312)	CFAP20DC (ENSFCAG00000031444)	FAM3D (ENSFCAG00000006529) ##22	FAM107A (ENSFCAG00000031113)	ACOX2 (ENSFCAG00000002210)	KCTD6 (ENSFCAG00000023632)	PDHB (ENSFCAG00000002206)	PXK (ENSFCAG00000006526)	HTD2 (ENSFCAG00000040350)	RPP14 (ENSFCAG00000033032)	ABHD6 (ENSFCAG00000006524)	DNASE1L3 (ENSFCAG00000006522)	ENSFCAG00000049756	FLNB (ENSFCAG00000006518)	SLMAP (ENSFCAG00000030822)	DENND6A (ENSFCAG00000027725)	PDE12 (ENSFCAG00000031696)	DNAH12 (ENSFCAG00000038961)
Caniformia	DUPLICATION
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00630000090979	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Canidae	ANCESTRAL SPECIES		ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214.a	ENSGT00940000155048	ENSGT00910000148820	ENSGT00630000090979	ENSGT00390000000378.d.b.eb.g.a.b	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214.a	ENSGT00940000155048	ENSGT00910000148820	ENSGT00390000018085.a.b.a.c.a	ENSGT00630000090979	ENSGT00390000000378.d.b.eb.g.a.b	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280.ec
Dingo	MODERN SPECIES	401	ATXN7 (ENSCAFG00020010789)	THOC7 (ENSCAFG00020010785)	C3orf49 (ENSCAFG00020010782)	SNTN (ENSCAFG00020010778)	SYNPR (ENSCAFG00020010764)	ENSCAFG00020010590 ##17	FEZF2 (ENSCAFG00020010552)	C3orf14 (ENSCAFG00020010549)	ENSCAFG00020010546	PTPRG (ENSCAFG00020010252)	ENSCAFG00020010227	ENSCAFG00020010226	ENSCAFG00020010221	ENSCAFG00020010214	CFAP20DC (ENSCAFG00020010174)	FAM3D (ENSCAFG00020010163) ##22	FAM107A (ENSCAFG00020010161)	ACOX2 (ENSCAFG00020010158)	KCTD6 (ENSCAFG00020010154)	PDHB (ENSCAFG00020010134)	PXK (ENSCAFG00020010131)	HTD2 (ENSCAFG00020010130)	RPP14 (ENSCAFG00020010128)	ABHD6 (ENSCAFG00020010122)	DNASE1L3 (ENSCAFG00020010119)	ENSCAFG00020010019	FLNB (ENSCAFG00020008260)	SLMAP (ENSCAFG00020007038)	DENND6A (ENSCAFG00020006723)	ARF4 (ENSCAFG00020006698)	PDE12 (ENSCAFG00020006692)
Dog	MODERN SPECIES	12	PSMD6 (ENSCAFG00845013485)	ATXN7 (ENSCAFG00845013551)	THOC7 (ENSCAFG00845013663)	C20H3orf49 (ENSCAFG00845013688)	SNTN (ENSCAFG00845013709)	SYNPR (ENSCAFG00845013755)	ENSCAFG00845014108 ##17	FEZF2 (ENSCAFG00845014997)	ENSCAFG00845015023	PTPRG (ENSCAFG00845015120)	ENSCAFG00845015252	ENSCAFG00845015296	ENSCAFG00845015351	FHIT (ENSCAFG00845017871)	CFAP20DC (ENSCAFG00845018102)	FAM3D (ENSCAFG00845018633) ##22	FAM107A (ENSCAFG00845018733)	ACOX2 (ENSCAFG00845018826)	KCTD6 (ENSCAFG00845019061)	PDHB (ENSCAFG00845019154)	PXK (ENSCAFG00845019503)	HTD2 (ENSCAFG00845020286)	ABHD6 (ENSCAFG00845020446)	DNASE1L3 (ENSCAFG00845020523)	FLNB (ENSCAFG00845020721)	SLMAP (ENSCAFG00845021335)	DENND6A (ENSCAFG00845021689)	ARF4 (ENSCAFG00845021882)	PDE12 (ENSCAFG00845022018)	DNAH12 (ENSCAFG00845022260)	ASB14 (ENSCAFG00845023178)
Red fox	MODERN SPECIES	5	THOC7 (ENSVVUG00000014787)	ENSVVUG00000014789	CUNH3orf49 (ENSVVUG00000014791)	SNTN (ENSVVUG00000014798)	SYNPR (ENSVVUG00000014802)	ENSVVUG00000014819 ##17	FEZF2 (ENSVVUG00000014834)	CUNH3orf14 (ENSVVUG00000014835)	PTPRG (ENSVVUG00000014881)	ENSVVUG00000015322	ENSVVUG00000015330	ENSVVUG00000015339	ENSVVUG00000015358	CFAP20DC (ENSVVUG00000015388)	ENSVVUG00000015431	ENSVVUG00000015434 ##22	FAM107A (ENSVVUG00000015450)	ACOX2 (ENSVVUG00000015454)	KCTD6 (ENSVVUG00000015462)	PDHB (ENSVVUG00000015465)	PXK (ENSVVUG00000015499)	ENSVVUG00000016087	ABHD6 (ENSVVUG00000016097)	DNASE1L3 (ENSVVUG00000016103)	ENSVVUG00000016106	ENSVVUG00000016113	FLNB (ENSVVUG00000016468)	SLMAP (ENSVVUG00000020288)	ENSVVUG00000020326	DENND6A (ENSVVUG00000020328)	ARF4 (ENSVVUG00000020333)
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00630000090979	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Ursidae	ANCESTRAL SPECIES	11	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00910000148820	ENSGT00940000155048	ENSGT00630000090979	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000163089.b.k.d	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297.d
Ursus	ANCESTRAL SPECIES	89	ENSGT00940000155820	ENSGT00940000156409	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00630000090979	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000163089.b.k.d	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297.d	ENSGT00940000157205
American black bear	MODERN SPECIES	3994																FAM3D (ENSUAMG00000017160) ##22
Polar bear	MODERN SPECIES	251	ENSUMAG00000023532	ENSUMAG00000023522	ATXN7 (ENSUMAG00000023518)	ENSUMAG00000023514	ENSUMAG00000023513	C3orf49 (ENSUMAG00000023511)	SNTN (ENSUMAG00000023507)	SYNPR (ENSUMAG00000023503)	ENSUMAG00000023502 ##17	ENSUMAG00000023498 ##17	C3orf14 (ENSUMAG00000023496)	ENSUMAG00000023495	PTPRG (ENSUMAG00000023396)	ENSUMAG00000023355	CFAP20DC (ENSUMAG00000023336)	FAM3D (ENSUMAG00000023325) ##22	FAM107A (ENSUMAG00000023320)	ACOX2 (ENSUMAG00000023278)	KCTD6 (ENSUMAG00000023272)	ENSUMAG00000023271	PDHB (ENSUMAG00000023268)	PXK (ENSUMAG00000023178)	HTD2 (ENSUMAG00000023134)	RPP14 (ENSUMAG00000023130)	ABHD6 (ENSUMAG00000023128)	DNASE1L3 (ENSUMAG00000023124)	ENSUMAG00000023083	ENSUMAG00000022158	ENSUMAG00000021934	SLMAP (ENSUMAG00000021927)	DENND6A (ENSUMAG00000021916)
Giant Panda	MODERN SPECIES	14	PSMD6 (ENSAMEG00000015235)	ATXN7 (ENSAMEG00000015260)	THOC7 (ENSAMEG00000015287)	C3orf49 (ENSAMEG00000015295)	SNTN (ENSAMEG00000015296)	SYNPR (ENSAMEG00000024916)	CADPS (ENSAMEG00000015310)	FEZF2 (ENSAMEG00000029919)	C3orf14 (ENSAMEG00000024752)	ENSAMEG00000024667	ENSAMEG00000030770	PTPRG (ENSAMEG00000015376)	ENSAMEG00000028134	ENSAMEG00000017139	CFAP20DC (ENSAMEG00000012130)	FAM3D (ENSAMEG00000012119) ##22	FAM107A (ENSAMEG00000012112)	ACOX2 (ENSAMEG00000012066)	KCTD6 (ENSAMEG00000012064)	ENSAMEG00000014747	PDHB (ENSAMEG00000012042)	PXK (ENSAMEG00000012000)	HTD2 (ENSAMEG00000030181)	ABHD6 (ENSAMEG00000011973)	DNASE1L3 (ENSAMEG00000011952)	ENSAMEG00000028857	FLNB (ENSAMEG00000011883)	ENSAMEG00000024164	SLMAP (ENSAMEG00000011861)	DENND6A (ENSAMEG00000011826)	ARF4 (ENSAMEG00000011813)
Mustelinae	ANCESTRAL SPECIES	18	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280.ec
American mink	MODERN SPECIES	47														FHIT (ENSNVIG00000020547)	CFAP20DC (ENSNVIG00000020597)	ENSNVIG00000020805 ##22	ENSNVIG00000020818	FAM107A (ENSNVIG00000020822)	ACOX2 (ENSNVIG00000020861)	KCTD6 (ENSNVIG00000020909)	PDHB (ENSNVIG00000020924)	PXK (ENSNVIG00000020975)	HTD2 (ENSNVIG00000021195)	RPP14 (ENSNVIG00000021200)	ABHD6 (ENSNVIG00000021220)	DNSL3 (ENSNVIG00000021246)	FLNB (ENSNVIG00000021302)	SLMAP (ENSNVIG00000021646)	DENND6A (ENSNVIG00000022141)	ARF4 (ENSNVIG00000022160)	PDE12 (ENSNVIG00000022177)
Ferret	MODERN SPECIES	163	ENSMPUG00000016938	ADAMTS9 (ENSMPUG00000016936)	PRICKLE2 (ENSMPUG00000016934)	PSMD6 (ENSMPUG00000016933)	ATXN7 (ENSMPUG00000016932)	THOC7 (ENSMPUG00000016928)	C3orf49 (ENSMPUG00000016925)	SNTN (ENSMPUG00000016924)	SYNPR (ENSMPUG00000016922)	ENSMPUG00000016917 ##17	FEZF2 (ENSMPUG00000016916)	C3orf14 (ENSMPUG00000016914)	PTPRG (ENSMPUG00000016911)	ENSMPUG00000016910	CFAP20DC (ENSMPUG00000016909)	FAM3D (ENSMPUG00000016903) ##22	FAM107A (ENSMPUG00000016902)	ACOX2 (ENSMPUG00000016900)	KCTD6 (ENSMPUG00000016899)	PDHB (ENSMPUG00000016896)	PXK (ENSMPUG00000016881)	RPP14 (ENSMPUG00000016880)	ABHD6 (ENSMPUG00000016878)	DNASE1L3 (ENSMPUG00000016877)	FLNB (ENSMPUG00000016876)	SLMAP (ENSMPUG00000016875)	DENND6A (ENSMPUG00000016873)	ARF4 (ENSMPUG00000016871)	PDE12 (ENSMPUG00000016869)	DNAH12 (ENSMPUG00000016863)	ASB14 (ENSMPUG00000016857)
Caniformia	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a.b ##22
Canidae	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a.b ##22
Red fox	MODERN SPECIES	116									ENSVVUG00000012328	PLSCR1 (ENSVVUG00000012320)	PLSCR5 (ENSVVUG00000012305)	ENSVVUG00000012281	ZIC4 (ENSVVUG00000012278)	ZIC1 (ENSVVUG00000012273)	ENSVVUG00000012264	ENSVVUG00000012257 ##22	AGTR1 (ENSVVUG00000012243)	CPB1 (ENSVVUG00000012236)	CPA3 (ENSVVUG00000012233)	GYG1 (ENSVVUG00000012194)	HLTF (ENSVVUG00000012173)	HPS3 (ENSVVUG00000012125)	CP (ENSVVUG00000012074)	ENSVVUG00000011311	TM4SF18 (ENSVVUG00000011274)	ENSVVUG00000011270	TM4SF1 (ENSVVUG00000011257)	TM4SF4 (ENSVVUG00000011230)	WWTR1 (ENSVVUG00000011160)	COMMD2 (ENSVVUG00000011132)	RNF13 (ENSVVUG00000011109)
Caniformia_b	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a.b ##22
Mustelinae	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a.b ##22
American mink	MODERN SPECIES	198														PLOD2 (ENSNVIG00000009482)	PLSCR4 (ENSNVIG00000009409)	ENSNVIG00000009383 ##22	PLSCR1 (ENSNVIG00000009374)	PLSCR5 (ENSNVIG00000009349)	MAB21L2 (ENSNVIG00000009337)	LRBA (ENSNVIG00000009168)	DCLK2 (ENSNVIG00000009004)
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00910000148820	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Equus	ANCESTRAL SPECIES	5	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00940000160100	ENSGT00390000005214	ENSGT00910000148820	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Horse	MODERN SPECIES	7	ADAMTS9 (ENSECAG00000019880)	PRICKLE2 (ENSECAG00000018642)	PSMD6 (ENSECAG00000021193)	ATXN7 (ENSECAG00000024801)	THOC7 (ENSECAG00000000497)	C16H3orf49 (ENSECAG00000010234)	SNTN (ENSECAG00000049202)	SYNPR (ENSECAG00000011166)	CADPS (ENSECAG00000014486)	FEZF2 (ENSECAG00000021037)	C16H3orf14 (ENSECAG00000001334)	PTPRG (ENSECAG00000007607)	ENSECAG00000028174	ENSECAG00000049939	CFAP20DC (ENSECAG00000011861)	FAM3D (ENSECAG00000018836) ##22	FAM107A (ENSECAG00000009135)	ACOX2 (ENSECAG00000011932)	KCTD6 (ENSECAG00000000409)	PXK (ENSECAG00000021069)	PDHB (ENSECAG00000005244)	HTD2 (ENSECAG00000052171)	ABHD6 (ENSECAG00000007024)	DNASE1L3 (ENSECAG00000015857)	ENSECAG00000042823	FLNB (ENSECAG00000015849)	SLMAP (ENSECAG00000019132)	ENSECAG00000047504	DENND6A (ENSECAG00000011706)	ARF4 (ENSECAG00000005229)	PDE12 (ENSECAG00000005326)
Donkey	MODERN SPECIES	13	ADAMTS9 (ENSEASG00005001635)	PRICKLE2 (ENSEASG00005001555)	PSMD6 (ENSEASG00005001544)	ATXN7 (ENSEASG00005001537)	THOC7 (ENSEASG00005001507)	C3orf49 (ENSEASG00005001501)	SNTN (ENSEASG00005033677)	SYNPR (ENSEASG00005001493)	CADPS (ENSEASG00005001465)	FEZF2 (ENSEASG00005001451)	C3orf14 (ENSEASG00005028011)	ENSEASG00005001443	PTPRG (ENSEASG00005001438)	FHIT (ENSEASG00005034025)	CFAP20DC (ENSEASG00005001417)	FAM3D (ENSEASG00005001408) ##22	FAM107A (ENSEASG00005001406)	ACOX2 (ENSEASG00005001306)	KCTD6 (ENSEASG00005030299)	PDHB (ENSEASG00005001281)	PXK (ENSEASG00005001264)	HTD2 (ENSEASG00005034841)	ABHD6 (ENSEASG00005001247)	DNASE1L3 (ENSEASG00005001234)	ENSEASG00005033149	FLNB (ENSEASG00005001198)	SLMAP (ENSEASG00005001149)	DENND6A (ENSEASG00005000843)	ARF4 (ENSEASG00005000663)	PDE12 (ENSEASG00005000644)	DNAH12 (ENSEASG00005000351)
Chiroptera	ANCESTRAL SPECIES	49	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Megabat	MODERN SPECIES	8014																FAM3D (ENSPVAG00000016562) ##22
Microchiroptera	ANCESTRAL SPECIES	47	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Microbat	MODERN SPECIES	1303														ENSMLUG00000025231	CFAP20DC (ENSMLUG00000002839)	FAM3D (ENSMLUG00000004938) ##22	FAM107A (ENSMLUG00000004935)	ACOX2 (ENSMLUG00000004929)	KCTD6 (ENSMLUG00000004923)	PDHB (ENSMLUG00000003956)	PXK (ENSMLUG00000003948)	RPP14 (ENSMLUG00000007998)	ABHD6 (ENSMLUG00000008200)	DNASE1L3 (ENSMLUG00000008179)	FLNB (ENSMLUG00000008090)
Greater horseshoe bat	MODERN SPECIES	8	MAGI1 (ENSRFEG00010012442)	ADAMTS9 (ENSRFEG00010012302)	PRICKLE2 (ENSRFEG00010012124)	PSMD6 (ENSRFEG00010011978)	ATXN7 (ENSRFEG00010011808)	THOC7 (ENSRFEG00010011747)	SNTN (ENSRFEG00010011418)	SYNPR (ENSRFEG00010011126)	CADPS (ENSRFEG00010010542)	ENSRFEG00010010393 ##17	FEZF2 (ENSRFEG00010010350)	C3orf14 (ENSRFEG00010010285)	PTPRG (ENSRFEG00010009803)	FHIT (ENSRFEG00010009725)	CFAP20DC (ENSRFEG00010009470)	FAM3D (ENSRFEG00010009429) ##22	FAM107A (ENSRFEG00010009358)	ACOX2 (ENSRFEG00010009311)	KCTD6 (ENSRFEG00010009284)	PDHB (ENSRFEG00010009165)	PXK (ENSRFEG00010008633)	HTD2 (ENSRFEG00010008586)	RPP14 (ENSRFEG00010008545)	ABHD6 (ENSRFEG00010008494)	DNASE1L3 (ENSRFEG00010008397)	FLNB (ENSRFEG00010007736)	SLMAP (ENSRFEG00010006232)	DENND6A (ENSRFEG00010005389)	ARF4 (ENSRFEG00010005363)	PDE12 (ENSRFEG00010005314)	ENSRFEG00010005307
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a ##22
Common shrew	MODERN SPECIES	6596																ENSSARG00000007503 ##22
Hedgehog	MODERN SPECIES	8360																ENSEEUG00000013923 ##22
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Tree shrew	MODERN SPECIES	1660																ENSTBEG00000012594 ##22	ACOX2 (ENSTBEG00000012161)	KCTD6 (ENSTBEG00000012063)	PXK (ENSTBEG00000011351)	RPP14 (ENSTBEG00000011066)	ENSTBEG00000010641	DNASE1L3 (ENSTBEG00000010012)	FLNB (ENSTBEG00000016221)
Glires	ANCESTRAL SPECIES	2	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Lagomorpha	ANCESTRAL SPECIES	11	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00950000182825.A.a.b.a.b.a.a.b	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Rabbit	MODERN SPECIES	20	SNTN (ENSOCUG00000004993)	ENSOCUG00000030562	SYNPR (ENSOCUG00000012918)	ENSOCUG00000002826 ##17	FEZF2 (ENSOCUG00000002823)	C3orf14 (ENSOCUG00000002820)	PTPRG (ENSOCUG00000002809)	ENSOCUG00000037455	ENSOCUG00000011936	ENSOCUG00000036123	ENSOCUG00000033273	ENSOCUG00000031954	ENSOCUG00000013177	ENSOCUG00000022146	CFAP20DC (ENSOCUG00000002773)	FAM3D (ENSOCUG00000002770) ##22	FAM107A (ENSOCUG00000004160)	ACOX2 (ENSOCUG00000004155)	KCTD6 (ENSOCUG00000009284)	ENSOCUG00000035883	PDHB (ENSOCUG00000015632)	PXK (ENSOCUG00000000833)	HTD2 (ENSOCUG00000030235)	RPP14 (ENSOCUG00000027202)	ABHD6 (ENSOCUG00000000832)	DNASE1L3 (ENSOCUG00000000831)	FLNB (ENSOCUG00000000828)	SLMAP (ENSOCUG00000000827)	ENSOCUG00000033749	DENND6A (ENSOCUG00000000826)	ENSOCUG00000000824
Pika	MODERN SPECIES	3161																FAM3D (ENSOPRG00000017221) ##22	ACOX2 (ENSOPRG00000017219)	ENSOPRG00000017218
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Rodentia_A	ANCESTRAL SPECIES	27	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225
Hystricomorpha	ANCESTRAL SPECIES	34	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00940000156679	ENSGT00390000017724.a.a.d	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000018500.b	ENSGT00940000155892	ENSGT00940000154791
Naked mole-rat female	MODERN SPECIES	28	SNTN (ENSHGLG00000038920)	ENSHGLG00000049764	SYNPR (ENSHGLG00000011002)	ENSHGLG00000002399 ##17	FEZF2 (ENSHGLG00000011569)	ENSHGLG00000012089	ENSHGLG00000000045	ENSHGLG00000034798	ENSHGLG00000046435	ENSHGLG00000034459	ENSHGLG00000006739	FHIT (ENSHGLG00000004547)	ENSHGLG00000020136	ENSHGLG00000008440	CFAP20DC (ENSHGLG00000004034)	ENSHGLG00000042914 ##22	ENSHGLG00000044019	FAM107A (ENSHGLG00000039598)	ACOX2 (ENSHGLG00000003614)	KCTD6 (ENSHGLG00000043396)	PDHB (ENSHGLG00000003420)	PXK (ENSHGLG00000003319)	HTD2 (ENSHGLG00000047381)	ABHD6 (ENSHGLG00000043839)	ENSHGLG00000006022	ENSHGLG00000042411	COLQ (ENSHGLG00000005340)	ENSHGLG00000003574	ENSHGLG00000002882	CAPN7 (ENSHGLG00000018881)	ENSHGLG00000015068
Hystricomorpha_a	ANCESTRAL SPECIES	50	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00940000156679	ENSGT00390000017724.a.a.d	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000018500.b	ENSGT00940000155892	ENSGT00940000154791
Guinea pig	MODERN SPECIES		ADAMTS9 (ENSCPOG00000004877)	PRICKLE2 (ENSCPOG00000031153)	PSMD6 (ENSCPOG00000006160)	ATXN7 (ENSCPOG00000002924)	THOC7 (ENSCPOG00000007930)	ENSCPOG00000021409	SNTN (ENSCPOG00000012821)	SYNPR (ENSCPOG00000012817)	ENSCPOG00000001699 ##17	FEZF2 (ENSCPOG00000001697)	C3orf14 (ENSCPOG00000006026)	PTPRG (ENSCPOG00000003197)	ENSCPOG00000032909	FHIT (ENSCPOG00000014924)	CFAP20DC (ENSCPOG00000010572)	FAM3D (ENSCPOG00000014686) ##22	FAM107A (ENSCPOG00000014689)	ACOX2 (ENSCPOG00000006721)	KCTD6 (ENSCPOG00000006719)	PDHB (ENSCPOG00000006713)	PXK (ENSCPOG00000006707)	HTD2 (ENSCPOG00000036094)	RPP14 (ENSCPOG00000004281)	ABHD6 (ENSCPOG00000037337)	METTL6 (ENSCPOG00000037082)	EAF1 (ENSCPOG00000031143)	COLQ (ENSCPOG00000002476)	HACL1 (ENSCPOG00000024203)	SH3BP5 (ENSCPOG00000015586)	CAPN7 (ENSCPOG00000015583)	DNAH1 (ENSCPOG00000003223)
Hystricomorpha_b	ANCESTRAL SPECIES	56	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00940000156679	ENSGT00390000017724.a.a.d	ENSGT00940000157248	ENSGT00940000156802	ENSGT00390000018500.b	ENSGT00940000155892	ENSGT00940000154791
Long-tailed chinchilla	MODERN SPECIES	137													ENSCLAG00000009212	CFAP20DC (ENSCLAG00000010156)	ENSCLAG00000011111	FAM3D (ENSCLAG00000008654) ##22	FAM107A (ENSCLAG00000008892)	ACOX2 (ENSCLAG00000006027)	KCTD6 (ENSCLAG00000006383)	PDHB (ENSCLAG00000006533)	PXK (ENSCLAG00000006771)	HTD2 (ENSCLAG00000007172)	ABHD6 (ENSCLAG00000007460)	METTL6 (ENSCLAG00000004710)	EAF1 (ENSCLAG00000004790)	COLQ (ENSCLAG00000004933)	HACL1 (ENSCLAG00000005601)	SH3BP5 (ENSCLAG00000005750)	CAPN7 (ENSCLAG00000006072)	DNAH1 (ENSCLAG00000006841)	BAP1 (ENSCLAG00000004745)
Degu	MODERN SPECIES	84													ENSODEG00000008902	ENSODEG00000009079	CFAP20DC (ENSODEG00000010376)	FAM3D (ENSODEG00000009550) ##22	FAM107A (ENSODEG00000009417)	ACOX2 (ENSODEG00000009665)	KCTD6 (ENSODEG00000009456)	PDHB (ENSODEG00000011071)	PXK (ENSODEG00000009061)	ENSODEG00000010715	ABHD6 (ENSODEG00000008297)	ENSODEG00000010685	METTL6 (ENSODEG00000008650)	EAF1 (ENSODEG00000008752)	COLQ (ENSODEG00000009333)	HACL1 (ENSODEG00000007866)	ENSODEG00000019451	SH3BP5 (ENSODEG00000013984)	CAPN7 (ENSODEG00000009154)
Sciuridae	ANCESTRAL SPECIES	37	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00390000013823.a.d	ENSGT00940000156802	ENSGT00940000157248	ENSGT00390000017724.a.a	ENSGT00940000156679	ENSGT00390000018500.b	ENSGT00940000155892
Eurasian red squirrel	MODERN SPECIES	7	PRICKLE2 (ENSSVLG00005021577)	PSMD6 (ENSSVLG00005021483)	ATXN7 (ENSSVLG00005021435)	THOC7 (ENSSVLG00005021365)	C3orf49 (ENSSVLG00005021282)	SNTN (ENSSVLG00005021224)	SYNPR (ENSSVLG00005021015)	ENSSVLG00005020948	CADPS (ENSSVLG00005019850)	FEZF2 (ENSSVLG00005019149)	C3orf14 (ENSSVLG00005019094)	PTPRG (ENSSVLG00005019016)	ENSSVLG00005018937	FHIT (ENSSVLG00005018873)	CFAP20DC (ENSSVLG00005018694)	FAM3D (ENSSVLG00005018585) ##22	FAM107A (ENSSVLG00005018396)	ACOX2 (ENSSVLG00005018118)	KCTD6 (ENSSVLG00005018061)	PDHB (ENSSVLG00005017770)	PXK (ENSSVLG00005016921)	HTD2 (ENSSVLG00005023060)	RPP14 (ENSSVLG00005023037)	ENSSVLG00005023010	ABHD6 (ENSSVLG00005022978)	ENSSVLG00005022958	HACL1 (ENSSVLG00005022883)	COLQ (ENSSVLG00005022341)	EAF1 (ENSSVLG00005022245)	METTL6 (ENSSVLG00005022187)	SH3BP5 (ENSSVLG00005022124)
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000157279	ENSGT00390000002873.j.a	ENSGT00390000002873.j.b	ENSGT00390000007318	ENSGT00390000002873.i	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00940000163977	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121.a	ENSGT00510000047225	ENSGT00390000013823.a.d	ENSGT00940000156802	ENSGT00940000157248	ENSGT00390000017724.a.a	ENSGT00940000156679	ENSGT00390000018500.b	ENSGT00940000155892
Marmotini_b	ANCESTRAL SPECIES	24														ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00510000048121.a.a	ENSGT00530000065109	ENSGT00510000047225	ENSGT00390000013823.a.d	ENSGT00940000156802	ENSGT00940000157248	ENSGT00390000017724.a.a	ENSGT00940000156679	ENSGT00390000018500.b	ENSGT00940000155892
Arctic ground squirrel	MODERN SPECIES	259														FHIT (ENSUPAG00010017629)	CFAP20DC (ENSUPAG00010017648)	ENSUPAG00010017673 ##22	FAM107A (ENSUPAG00010017743)	ACOX2 (ENSUPAG00010017757)	KCTD6 (ENSUPAG00010017784)	PDHB (ENSUPAG00010017799)	PXK (ENSUPAG00010017807)	ENSUPAG00010017884	ABHD6 (ENSUPAG00010017892)	ENSUPAG00010017908	HACL1 (ENSUPAG00010017918)	COLQ (ENSUPAG00010017933)	EAF1 (ENSUPAG00010017973)	METTL6 (ENSUPAG00010017985)
Squirrel	MODERN SPECIES	73													FHIT (ENSSTOG00000029715)	ENSSTOG00000022099	CFAP20DC (ENSSTOG00000014823)	FAM3D (ENSSTOG00000033685) ##22	FAM107A (ENSSTOG00000006312)	ACOX2 (ENSSTOG00000006269)	KCTD6 (ENSSTOG00000006260)	PDHB (ENSSTOG00000019553)	PXK (ENSSTOG00000015398)	ENSSTOG00000015394	HTD2 (ENSSTOG00000024837)	ABHD6 (ENSSTOG00000015390)	ENSSTOG00000015008	HACL1 (ENSSTOG00000020242)	COLQ (ENSSTOG00000031231)	EAF1 (ENSSTOG00000014978)	METTL6 (ENSSTOG00000014974)	SH3BP5 (ENSSTOG00000014966)	CAPN7 (ENSSTOG00000014949)
Rodentia_B	ANCESTRAL SPECIES	26	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Myomorpha	ANCESTRAL SPECIES	62			ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb
Muroidea	ANCESTRAL SPECIES	76			ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb
Muroidea_A	ANCESTRAL SPECIES	32	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb
Cricetidae	ANCESTRAL SPECIES	31	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb
Cricetinae	ANCESTRAL SPECIES	9	ENSGT01090000260018.A.a.a.a.b.a	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00710000106792.h	ENSGT00940000160729.h	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856
Chinese hamster chok1gshd	MODERN SPECIES	76	Psmd6 (ENSCGRG00001024223)	Atxn7 (ENSCGRG00001022842)	Thoc7 (ENSCGRG00001014815)	Cdhr18 (ENSCGRG00001009383)	Sntn (ENSCGRG00001000254)	Synpr (ENSCGRG00001024206)	Cadps (ENSCGRG00001018622) ##17	Fezf2 (ENSCGRG00001011113)	3830406C13Rik (ENSCGRG00001009640)	ENSCGRG00001023304	Fhit (ENSCGRG00001000886)	ENSCGRG00001008920	ENSCGRG00001011021	Cfap20dc (ENSCGRG00001017819)	ENSCGRG00001016036	Fam3d (ENSCGRG00001000168) ##22	Fam107a (ENSCGRG00001022141)	Acox2 (ENSCGRG00001013444)	Kctd6 (ENSCGRG00001009848)	ENSCGRG00001000571	Abcg3 (ENSCGRG00001004887)	ENSCGRG00001023071	Thoc2l (ENSCGRG00001009811)	Pkd2 (ENSCGRG00001016312)	Spp1 (ENSCGRG00001012247)	Dspp (ENSCGRG00001007381)	Mepe (ENSCGRG00001019599)	Ibsp (ENSCGRG00001016273)	Dmp1 (ENSCGRG00001013845)	Sparcl1 (ENSCGRG00001009590)	Gm17660 (ENSCGRG00001013296)
Golden Hamster	MODERN SPECIES	679	Or2t35 (ENSMAUG00000018066)	Or2t1 (ENSMAUG00000017961)	Or2t6 (ENSMAUG00000018019)	Psmd6 (ENSMAUG00000012233)	Atxn7 (ENSMAUG00000006633)	Thoc7 (ENSMAUG00000002228)	Cdhr18 (ENSMAUG00000007566)	Sntn (ENSMAUG00000004227)	Synpr (ENSMAUG00000000263)	Cadps (ENSMAUG00000017076) ##17	Fezf2 (ENSMAUG00000016293)	3830406C13Rik (ENSMAUG00000014212)	ENSMAUG00000011303	Fhit (ENSMAUG00000008107)	Cfap20dc (ENSMAUG00000000388)	Fam3d (ENSMAUG00000019297) ##22	Fam107a (ENSMAUG00000014387)	Acox2 (ENSMAUG00000013454)	Kctd6 (ENSMAUG00000012810)	ENSMAUG00000010500	ENSMAUG00000012640	Pkd2 (ENSMAUG00000006073)	Spp1 (ENSMAUG00000018138)	Mepe (ENSMAUG00000017270)	Ibsp (ENSMAUG00000016877)	Dmp1 (ENSMAUG00000005904)	Dspp (ENSMAUG00000003984)	Sparcl1 (ENSMAUG00000001180)	Gm17660 (ENSMAUG00000000460)	Nudt9 (ENSMAUG00000008475)	Hsd17b11 (ENSMAUG00000008255)
Cricetidae_B	ANCESTRAL SPECIES	42	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb
Northern American deer mouse	MODERN SPECIES	22	Psmd6 (ENSPEMG00000007867)	Atxn7 (ENSPEMG00000003214)	Thoc7 (ENSPEMG00000000620)	Gm11100 (ENSPEMG00000031200)	Cdhr18 (ENSPEMG00000018094)	Sntn (ENSPEMG00000009053)	Synpr (ENSPEMG00000008249)	Cadps (ENSPEMG00000018786) ##17	Fezf2 (ENSPEMG00000016571)	3830406C13Rik (ENSPEMG00000016152)	ENSPEMG00000013206	ENSPEMG00000028105	ENSPEMG00000000080	Fhit (ENSPEMG00000014589)	Cfap20dc (ENSPEMG00000013755)	Fam3d (ENSPEMG00000013914) ##22	Fam107a (ENSPEMG00000030495)	Acox2 (ENSPEMG00000016996)	Kctd6 (ENSPEMG00000026577)	ENSPEMG00000017537	Pdhb (ENSPEMG00000010631)	Pxk (ENSPEMG00000000865)	Rpp14 (ENSPEMG00000006600)	ENSPEMG00000029189	Abhd6 (ENSPEMG00000014877)	Dnase1l3 (ENSPEMG00000010743)	Flnb (ENSPEMG00000003413)	ENSPEMG00000030669	Galnt15 (ENSPEMG00000008935)	ENSPEMG00000014981	ENSPEMG00000030131
Prairie vole	MODERN SPECIES	14	ENSMOCG00000003409	Psmd6 (ENSMOCG00000000946)	Atxn7 (ENSMOCG00000018713)	Thoc7 (ENSMOCG00000019446)	Cdhr18 (ENSMOCG00000002117)	Sntn (ENSMOCG00000022682)	Synpr (ENSMOCG00000017455)	Cadps (ENSMOCG00000000470) ##17	Fezf2 (ENSMOCG00000008456)	3830406C13Rik (ENSMOCG00000002777)	ENSMOCG00000006123	ENSMOCG00000001937	Fhit (ENSMOCG00000002096)	Cfap20dc (ENSMOCG00000013078)	ENSMOCG00000014517	Fam3d (ENSMOCG00000000282) ##22	Fam107a (ENSMOCG00000022210)	Acox2 (ENSMOCG00000020368)	Kctd6 (ENSMOCG00000016836)	Pdhb (ENSMOCG00000021251)	Pxk (ENSMOCG00000016503)	Rpp14 (ENSMOCG00000012609)	ENSMOCG00000015810	Abhd6 (ENSMOCG00000013420)	Dnase1l3 (ENSMOCG00000006651)	Gm45521 (ENSMOCG00000005472)	Flnb (ENSMOCG00000012697)	ENSMOCG00000019983	Ptgs2 (ENSMOCG00000014822)	Pla2g4a (ENSMOCG00000011318)	ENSMOCG00000015221
Murinae	ANCESTRAL SPECIES	26	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00940000153661.a.b.a.b.a.a
Mus	ANCESTRAL SPECIES	8	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00860000135929
Mus_A	ANCESTRAL SPECIES	12	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00860000135929
Mus_B	ANCESTRAL SPECIES	11	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00860000135929
Mouse	MODERN SPECIES	5	Psmd6 (ENSMUSG00000021737)	Atxn7 (ENSMUSG00000021738)	Thoc7 (ENSMUSG00000053453)	Gm11100 (ENSMUSG00000079357)	Cdhr18 (ENSMUSG00000084902)	Sntn (ENSMUSG00000044772)	Synpr (ENSMUSG00000056296)	Cadps (ENSMUSG00000054423) ##17	Fezf2 (ENSMUSG00000021743)	Gm49355 (ENSMUSG00000114378)	3830406C13Rik (ENSMUSG00000033111)	PTPRG (ENSMUSG00000121513)	Gm3839 (ENSMUSG00000097148)	Fhit (ENSMUSG00000060579)	Cfap20dc (ENSMUSG00000021747)	Fam3d (ENSMUSG00000021749) ##22	Fam107a (ENSMUSG00000021750)	Acox2 (ENSMUSG00000021751)	Kctd6 (ENSMUSG00000021752)	Pdhb (ENSMUSG00000021748)	Pxk (ENSMUSG00000033885)	Rpp14 (ENSMUSG00000023156)	Abhd6 (ENSMUSG00000025277)	Dnase1l3 (ENSMUSG00000025279)	Gm45521 (ENSMUSG00000109649)	Flnb (ENSMUSG00000025278)	Gm10128 (ENSMUSG00000063277)	Gm10338 (ENSMUSG00000094706)	Gm3558 (ENSMUSG00000079364)	Gm3752 (ENSMUSG00000091617)	Gm5797 (ENSMUSG00000072726)
Mus_C	ANCESTRAL SPECIES	26	ENSGT01090000260018.A.a.a.a.a.b.a.f	ENSGT01090000260018.A.a.a.a.a.b.b	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873.h	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286.pb	ENSGT00860000135929
Steppe mouse	MODERN SPECIES	2532																Fam3d (ENSMSIG00000013802) ##22	Fam107a (ENSMSIG00000013777)	Acox2 (ENSMSIG00000013728)	Kctd6 (ENSMSIG00000013714)	Pdhb (ENSMSIG00000013665)	ENSMSIG00000013429	Rpp14 (ENSMSIG00000013425)	ENSMSIG00000013396	Abhd6 (ENSMSIG00000013377)	Dnase1l3 (ENSMSIG00000013352)	ENSMSIG00000013348	Flnb (ENSMSIG00000013237)	ENSMSIG00000013183
spretus	MODERN SPECIES	5	Il3ra (MGP_SPRETEiJ_G0019838)	Or2t1 (MGP_SPRETEiJ_G0019837)	Or2t6 (MGP_SPRETEiJ_G0019836)	Psmd6 (MGP_SPRETEiJ_G0019835)	MGP_SPRETEiJ_G0019834	Thoc7 (MGP_SPRETEiJ_G0019833)	Cdhr18 (MGP_SPRETEiJ_G0019832)	Sntn (MGP_SPRETEiJ_G0019831)	Synpr (MGP_SPRETEiJ_G0019830)	Cadps (MGP_SPRETEiJ_G0019829) ##17	Fezf2 (MGP_SPRETEiJ_G0019828)	MGP_SPRETEiJ_G0019827	MGP_SPRETEiJ_G0019826	Fhit (MGP_SPRETEiJ_G0019825)	Cfap20dc (MGP_SPRETEiJ_G0019824)	Fam3d (MGP_SPRETEiJ_G0019823) ##22	Fam107a (MGP_SPRETEiJ_G0019822)	Acox2 (MGP_SPRETEiJ_G0019821)	Kctd6 (MGP_SPRETEiJ_G0019820)	Pdhb (MGP_SPRETEiJ_G0019819)	Pxk (MGP_SPRETEiJ_G0019818)	Rpp14 (MGP_SPRETEiJ_G0019817)	Abhd6 (MGP_SPRETEiJ_G0019816)	Dnase1l3 (MGP_SPRETEiJ_G0019815)	Flnb (MGP_SPRETEiJ_G0019814)	MGP_SPRETEiJ_G0019813
Ryukyu mouse	MODERN SPECIES	5	Or2t1 (MGP_CAROLIEiJ_G0018961)	Or2t6 (MGP_CAROLIEiJ_G0018960)	Psmd6 (MGP_CAROLIEiJ_G0018959)	Atxn7 (MGP_CAROLIEiJ_G0018958)	Thoc7 (MGP_CAROLIEiJ_G0018957)	Cdhr18 (MGP_CAROLIEiJ_G0018956)	Sntn (MGP_CAROLIEiJ_G0018955)	Synpr (MGP_CAROLIEiJ_G0018954)	Cadps (MGP_CAROLIEiJ_G0018953) ##17	Fezf2 (MGP_CAROLIEiJ_G0018952)	MGP_CAROLIEiJ_G0018951	MGP_CAROLIEiJ_G0018950	MGP_CAROLIEiJ_G0018949	Fhit (MGP_CAROLIEiJ_G0018948)	Cfap20dc (MGP_CAROLIEiJ_G0018947)	Fam3d (MGP_CAROLIEiJ_G0018946) ##22	Fam107a (MGP_CAROLIEiJ_G0018945)	Acox2 (MGP_CAROLIEiJ_G0018944)	Kctd6 (MGP_CAROLIEiJ_G0018943)	Pdhb (MGP_CAROLIEiJ_G0018942)	Pxk (MGP_CAROLIEiJ_G0018941)	Rpp14 (MGP_CAROLIEiJ_G0018940)	Abhd6 (MGP_CAROLIEiJ_G0018939)	Dnase1l3 (MGP_CAROLIEiJ_G0018938)	Flnb (MGP_CAROLIEiJ_G0018937)	MGP_CAROLIEiJ_G0018936
Shrew mouse	MODERN SPECIES	21	MGP_PahariEiJ_G0029976	Or2t1 (MGP_PahariEiJ_G0029975)	Or2t6 (MGP_PahariEiJ_G0029974)	Psmd6 (MGP_PahariEiJ_G0029973)	Atxn7 (MGP_PahariEiJ_G0029972)	Thoc7 (MGP_PahariEiJ_G0029971)	Cdhr18 (MGP_PahariEiJ_G0029970)	Sntn (MGP_PahariEiJ_G0029969)	Synpr (MGP_PahariEiJ_G0029968)	Cadps (MGP_PahariEiJ_G0029967) ##17	Fezf2 (MGP_PahariEiJ_G0029966)	MGP_PahariEiJ_G0029965	MGP_PahariEiJ_G0029964	Fhit (MGP_PahariEiJ_G0029963)	Cfap20dc (MGP_PahariEiJ_G0029962)	Fam3d (MGP_PahariEiJ_G0029961) ##22	Fam107a (MGP_PahariEiJ_G0029960)	Acox2 (MGP_PahariEiJ_G0029959)	Kctd6 (MGP_PahariEiJ_G0029958)	Pdhb (MGP_PahariEiJ_G0029957)	Pxk (MGP_PahariEiJ_G0029956)	Rpp14 (MGP_PahariEiJ_G0029955)	Abhd6 (MGP_PahariEiJ_G0029954)	Dnase1l3 (MGP_PahariEiJ_G0029953)	Flnb (MGP_PahariEiJ_G0029952)	MGP_PahariEiJ_G0029951
Rat	MODERN SPECIES	6	LOC102550375 (ENSRNOG00000027633)	RGD1565725 (ENSRNOG00000070977)	LOC100910341 (ENSRNOG00000070440)	Sntn (ENSRNOG00000027383)	Synpr (ENSRNOG00000008203)	ENSRNOG00000068103	Cadps (ENSRNOG00000008570) ##17	Fezf2 (ENSRNOG00000009206)	RGD1306063 (ENSRNOG00000039871)	LOC103693281 (ENSRNOG00000063454)	Ptprg (ENSRNOG00000009419)	Tpt1-ps2 (ENSRNOG00000070732)	Fhit (ENSRNOG00000064939)	Cfap20dc (ENSRNOG00000007206)	ENSRNOG00000070952	Fam3d (ENSRNOG00000007320) ##22	Fam107a (ENSRNOG00000033261)	Acox2 (ENSRNOG00000007378)	Kctd6 (ENSRNOG00000007817)	ENSRNOG00000028821	AABR07072440.1 (ENSRNOG00000033030)	Pdhb (ENSRNOG00000007895)	Pxk (ENSRNOG00000008024)	Rpp14 (ENSRNOG00000063660)	Rpp14 (ENSRNOG00000039829)	Abhd6 (ENSRNOG00000008167)	Dnase1l3 (ENSRNOG00000009291)	LOC108353015 (ENSRNOG00000061275)	Flnb (ENSRNOG00000009470)	AABR07017236.1 (ENSRNOG00000024504)	AABR07017236.2 (ENSRNOG00000057837)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1129															Cfap20dc (ENSNGAG00000013178)	Fam3d (ENSNGAG00000020425) ##22	Fam107a (ENSNGAG00000018416)	Acox2 (ENSNGAG00000017258)	Kctd6 (ENSNGAG00000016876)	Pdhb (ENSNGAG00000012646)	Pxk (ENSNGAG00000005739)	Rpp14 (ENSNGAG00000000352)	ENSNGAG00000020216	Abhd6 (ENSNGAG00000012361)	Dnase1l3 (ENSNGAG00000004622)	Gm45521 (ENSNGAG00000002541)	ENSNGAG00000001421
Lesser Egyptian jerboa	MODERN SPECIES	166														ENSJJAG00000008056	Cfap20dc (ENSJJAG00000004346)	Fam3d (ENSJJAG00000001255) ##22	Fam107a (ENSJJAG00000000596)	Acox2 (ENSJJAG00000024029)	Kctd6 (ENSJJAG00000023801)	Lmod3 (ENSJJAG00000023783)	ENSJJAG00000023684	Uba3 (ENSJJAG00000004056)	ENSJJAG00000000648	Tmf1 (ENSJJAG00000021404)	Eogt (ENSJJAG00000020125)	Tafa4 (ENSJJAG00000023530)	Tafa1 (ENSJJAG00000023297)	Suclg2 (ENSJJAG00000023096)	Kbtbd8 (ENSJJAG00000022687)	Lrig1 (ENSJJAG00000021266)	Slc25a26 (ENSJJAG00000019520)
Kangaroo rat	MODERN SPECIES	331	Adamts9 (ENSDORG00000001254)	Prickle2 (ENSDORG00000005850)	Psmd6 (ENSDORG00000007608)	Atxn7 (ENSDORG00000007600)	ENSDORG00000028787	Cdhr18 (ENSDORG00000027325)	Sntn (ENSDORG00000001877)	Synpr (ENSDORG00000001872)	Cadps (ENSDORG00000006824) ##17	Fezf2 (ENSDORG00000000030)	ENSDORG00000007695	ENSDORG00000007693	ENSDORG00000029010	Fhit (ENSDORG00000007571)	Cfap20dc (ENSDORG00000011111)	Fam3d (ENSDORG00000011108) ##22	Fam107a (ENSDORG00000005759)	Acox2 (ENSDORG00000016332)	Kctd6 (ENSDORG00000027474)	ENSDORG00000009685	Pxk (ENSDORG00000009687)	Rpp14 (ENSDORG00000028703)	Abhd6 (ENSDORG00000014648)	Dnase1l3 (ENSDORG00000024128)	Flnb (ENSDORG00000013143)	Slmap (ENSDORG00000006527)	Dennd6a (ENSDORG00000008820)	Arf4 (ENSDORG00000004312)	Pde12 (ENSDORG00000004313)	ENSDORG00000024834	ENSDORG00000007012
Primates	ANCESTRAL SPECIES	1	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Lemuriformes	ANCESTRAL SPECIES	17	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Lemuriformes_a	ANCESTRAL SPECIES	6	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00910000148820	ENSGT00940000163977	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Coquerels sifaka	MODERN SPECIES	50	PSMD6 (ENSPCOG00000017855)	ATXN7 (ENSPCOG00000021138)	ENSPCOG00000022000	C3orf49 (ENSPCOG00000016558)	ENSPCOG00000023618	SNTN (ENSPCOG00000016354)	SYNPR (ENSPCOG00000022257)	CADPS (ENSPCOG00000027683)	FEZF2 (ENSPCOG00000020418)	C3orf14 (ENSPCOG00000020405)	ENSPCOG00000027667	PTPRG (ENSPCOG00000011073)	ENSPCOG00000015146	ENSPCOG00000026096	CFAP20DC (ENSPCOG00000026642)	FAM3D (ENSPCOG00000016154) ##22	FAM107A (ENSPCOG00000016417)	ACOX2 (ENSPCOG00000027383)	KCTD6 (ENSPCOG00000016167)	PDHB (ENSPCOG00000018714)	PXK (ENSPCOG00000023402)	RPP14 (ENSPCOG00000027150)	ABHD6 (ENSPCOG00000023970)	DNASE1L3 (ENSPCOG00000014644)	FLNB (ENSPCOG00000028790)	SLMAP (ENSPCOG00000002153)	DENND6A (ENSPCOG00000016384)	ARF4 (ENSPCOG00000001896)	PDE12 (ENSPCOG00000026004)	DNAH12 (ENSPCOG00000018048)	ASB14 (ENSPCOG00000026351)
Greater bamboo lemur	MODERN SPECIES	740													ENSPSMG00000019709	ENSPSMG00000019723	CFAP20DC (ENSPSMG00000019750)	FAM3D (ENSPSMG00000019771) ##22	FAM107A (ENSPSMG00000019826)	ACOX2 (ENSPSMG00000019901)	KCTD6 (ENSPSMG00000019925)	PDHB (ENSPSMG00000020007)	PXK (ENSPSMG00000020270)	ENSPSMG00000020498	ENSPSMG00000020501	ENSPSMG00000020505	RPP14 (ENSPSMG00000020525)	ABHD6 (ENSPSMG00000020543)	DNASE1L3 (ENSPSMG00000020574)	FLNB (ENSPSMG00000021657)	SLMAP (ENSPSMG00000022635)	ENSPSMG00000022702	ENSPSMG00000022704
Mouse lemur	MODERN SPECIES	129															CFAP20DC (ENSMICG00000012436)	FAM3D (ENSMICG00000035637) ##22	ENSMICG00000017888	PSMD6 (ENSMICG00000014542)	PRICKLE2 (ENSMICG00000033980)	TMEM150C (ENSMICG00000033462)	ENOPH1 (ENSMICG00000001452)	HNRNPDL (ENSMICG00000001445)	HNRNPD (ENSMICG00000010984)	SEC31A (ENSMICG00000036189)	THAP9 (ENSMICG00000043018)	ENSMICG00000008553	COPS4 (ENSMICG00000032901)	PLAC8 (ENSMICG00000046029)	COQ2 (ENSMICG00000041881)	HPSE (ENSMICG00000031866)	HELQ (ENSMICG00000026967)
Bushbaby	MODERN SPECIES	130	PRICKLE2 (ENSOGAG00000009507)	ENSOGAG00000028241	PSMD6 (ENSOGAG00000015279)	ATXN7 (ENSOGAG00000031555)	THOC7 (ENSOGAG00000024865)	C3orf49 (ENSOGAG00000015268)	ENSOGAG00000030192	SNTN (ENSOGAG00000016059)	SYNPR (ENSOGAG00000000442)	ENSOGAG00000008116 ##17	FEZF2 (ENSOGAG00000008112)	C3orf14 (ENSOGAG00000008107)	PTPRG (ENSOGAG00000008069)	ENSOGAG00000030687	CFAP20DC (ENSOGAG00000004296)	FAM3D (ENSOGAG00000004294) ##22	FAM107A (ENSOGAG00000004293)	ACOX2 (ENSOGAG00000004289)	KCTD6 (ENSOGAG00000004287)	PDHB (ENSOGAG00000004285)	PXK (ENSOGAG00000004283)	ENSOGAG00000029128	ABHD6 (ENSOGAG00000006920)	DNASE1L3 (ENSOGAG00000004461)	FLNB (ENSOGAG00000004454)	SLMAP (ENSOGAG00000032914)	DENND6A (ENSOGAG00000005320)	ARF4 (ENSOGAG00000012034)	PDE12 (ENSOGAG00000024093)	DNAH12 (ENSOGAG00000028219)
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Tarsier	MODERN SPECIES	2283														CFAP20DC (ENSTSYG00000012121)	ENSTSYG00000033815	FAM3D (ENSTSYG00000008033) ##22	FAM107A (ENSTSYG00000009779)
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00860000135738	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Hominidae	ANCESTRAL SPECIES	2	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00860000135738	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Pan	ANCESTRAL SPECIES	2	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00390000007888.d	ENSGT00860000135738	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000156464.p	ENSGT00940000155048	ENSGT00390000004428.a.g.b.c.a.a	ENSGT00940000155143.x	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Chimpanzee	MODERN SPECIES	16	SNTN (ENSPTRG00000015074)	SYNPR (ENSPTRG00000015073)	ENSPTRG00000051485	ENSPTRG00000052322	CADPS (ENSPTRG00000015072) ##17	FEZF2 (ENSPTRG00000015071)	C3H3orf14 (ENSPTRG00000015070)	ENSPTRG00000038955	ENSPTRG00000051643	PTPRG (ENSPTRG00000015067)	ENSPTRG00000047476	ENSPTRG00000043102	FHIT (ENSPTRG00000015065)	ENSPTRG00000034348	CFAP20DC (ENSPTRG00000015064)	FAM3D (ENSPTRG00000022801) ##22	FAM107A (ENSPTRG00000015062)	ACOX2 (ENSPTRG00000015061)	KCTD6 (ENSPTRG00000015060)	PDHB (ENSPTRG00000015059)	PXK (ENSPTRG00000015058)	HTD2 (ENSPTRG00000040419)	RPP14 (ENSPTRG00000048740)	ABHD6 (ENSPTRG00000015056)	DNASE1L3 (ENSPTRG00000015055)	FLNB (ENSPTRG00000015054)	SLMAP (ENSPTRG00000015053)	DENND6A (ENSPTRG00000015052)	ARF4 (ENSPTRG00000015051)	PDE12 (ENSPTRG00000030221)	DNAH12 (ENSPTRG00000015049)
Bonobo	MODERN SPECIES	16	ENSPPAG00000014773	SYNPR (ENSPPAG00000037002)	ENSPPAG00000034871	ENSPPAG00000033241	ENSPPAG00000037095 ##17	FEZF2 (ENSPPAG00000039379)	C3orf14 (ENSPPAG00000033418)	ENSPPAG00000005174	ENSPPAG00000027644	PTPRG (ENSPPAG00000036859)	ENSPPAG00000015559	ENSPPAG00000034829	ENSPPAG00000037040	ENSPPAG00000004830	CFAP20DC (ENSPPAG00000037900)	FAM3D (ENSPPAG00000033729) ##22	FAM107A (ENSPPAG00000043565)	ACOX2 (ENSPPAG00000029182)	KCTD6 (ENSPPAG00000031362)	PDHB (ENSPPAG00000028933)	PXK (ENSPPAG00000027245)	HTD2 (ENSPPAG00000036591)	RPP14 (ENSPPAG00000041153)	ABHD6 (ENSPPAG00000039614)	DNASE1L3 (ENSPPAG00000042704)	FLNB (ENSPPAG00000030465)	ENSPPAG00000027261	SLMAP (ENSPPAG00000038504)	DENND6A (ENSPPAG00000032750)	ARF4 (ENSPPAG00000036638)	PDE12 (ENSPPAG00000034712)
Human	MODERN SPECIES	15	MAGI1 (ENSG00000151276)	ADAMTS9 (ENSG00000163638)	PRICKLE2 (ENSG00000163637)	PSMD6 (ENSG00000163636)	ATXN7 (ENSG00000163635)	THOC7 (ENSG00000163634)	C3orf49 (ENSG00000163632)	SNTN (ENSG00000188817)	SYNPR (ENSG00000163630)	CADPS (ENSG00000163618)	FEZF2 (ENSG00000153266)	C3orf14 (ENSG00000114405)	PTPRG (ENSG00000144724)	FHIT (ENSG00000189283)	CFAP20DC (ENSG00000163689)	FAM3D (ENSG00000198643) ##22	FAM107A (ENSG00000168309)	ACOX2 (ENSG00000168306)	KCTD6 (ENSG00000168301)	PDHB (ENSG00000168291)	PXK (ENSG00000168297)	HTD2 (ENSG00000255154)	RPP14 (ENSG00000163684)	ABHD6 (ENSG00000163686)	DNASE1L3 (ENSG00000163687)	FLNB (ENSG00000136068)	SLMAP (ENSG00000163681)	DENND6A (ENSG00000174839)	ARF4 (ENSG00000168374)	PDE12 (ENSG00000174840)	DNAH12 (ENSG00000174844)
Gorilla	MODERN SPECIES	16	ATXN7 (ENSGGOG00000012900)	THOC7 (ENSGGOG00000024282)	C3orf49 (ENSGGOG00000012760)	SNTN (ENSGGOG00000012870)	SYNPR (ENSGGOG00000002513)	ENSGGOG00000037389	ENSGGOG00000042564	ENSGGOG00000015194 ##17	ENSGGOG00000026200	C3orf14 (ENSGGOG00000043774)	ENSGGOG00000022395	ENSGGOG00000026144	PTPRG (ENSGGOG00000006858)	FHIT (ENSGGOG00000042949)	CFAP20DC (ENSGGOG00000034942)	FAM3D (ENSGGOG00000015448) ##22	FAM107A (ENSGGOG00000015452)	ACOX2 (ENSGGOG00000015441)	KCTD6 (ENSGGOG00000010706)	PDHB (ENSGGOG00000013150)	PXK (ENSGGOG00000015022)	HTD2 (ENSGGOG00000040783)	RPP14 (ENSGGOG00000016164)	ABHD6 (ENSGGOG00000015826)	DNASE1L3 (ENSGGOG00000010072)	FLNB (ENSGGOG00000010039)	SLMAP (ENSGGOG00000034879)	DENND6A (ENSGGOG00000034949)	ARF4 (ENSGGOG00000000294)	PDE12 (ENSGGOG00000003312)	ENSGGOG00000004557
Orangutan	MODERN SPECIES	16	MAGI1 (ENSPPYG00000013739)	ADAMTS9 (ENSPPYG00000013740)	PRICKLE2 (ENSPPYG00000013741)	PSMD6 (ENSPPYG00000013743)	ATXN7 (ENSPPYG00000013744)	THOC7 (ENSPPYG00000013746)	C3orf49 (ENSPPYG00000013745)	SNTN (ENSPPYG00000013747)	SYNPR (ENSPPYG00000013748)	CADPS (ENSPPYG00000013749)	FEZF2 (ENSPPYG00000013750)	C3orf14 (ENSPPYG00000013751)	PTPRG (ENSPPYG00000013752)	FHIT (ENSPPYG00000013753)	CFAP20DC (ENSPPYG00000013754)	FAM3D (ENSPPYG00000013756) ##22	FAM107A (ENSPPYG00000035448)	ENSPPYG00000025893	ACOX2 (ENSPPYG00000013758)	KCTD6 (ENSPPYG00000013759)	PDHB (ENSPPYG00000013760)	PXK (ENSPPYG00000013761)	RPP14 (ENSPPYG00000013762)	ENSPPYG00000039120	ABHD6 (ENSPPYG00000013763)	DNASE1L3 (ENSPPYG00000013764)	FLNB (ENSPPYG00000013765)	SLMAP (ENSPPYG00000013766)	DENND6A (ENSPPYG00000013767)	ARF4 (ENSPPYG00000013768)	PDE12 (ENSPPYG00000013769)
Gibbon	MODERN SPECIES	19	ENSNLEG00000026950	ENSNLEG00000013386	ENSNLEG00000031578	TNNI2 (ENSNLEG00000013373)	SYT8 (ENSNLEG00000013338)	ENSNLEG00000013309	ENSNLEG00000029513	ENSNLEG00000013307	ENSNLEG00000010801	DUSP8 (ENSNLEG00000013284)	MOB2 (ENSNLEG00000013254)	BRSK2 (ENSNLEG00000013155)	TOLLIP (ENSNLEG00000013139)	ENSNLEG00000034795	ENSNLEG00000018904	FAM3D (ENSNLEG00000007320) ##22	FAM107A (ENSNLEG00000007318)	ACOX2 (ENSNLEG00000007315)	KCTD6 (ENSNLEG00000034378)	PDHB (ENSNLEG00000007307)	PXK (ENSNLEG00000007304)	RPP14 (ENSNLEG00000034186)	HTD2 (ENSNLEG00000018543)	ABHD6 (ENSNLEG00000033375)	DNASE1L3 (ENSNLEG00000007300)	FLNB (ENSNLEG00000007278)	SLMAP (ENSNLEG00000007275)	DENND6A (ENSNLEG00000007273)	ARF4 (ENSNLEG00000027374)	ENSNLEG00000007269	DNAH12 (ENSNLEG00000007264)
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00910000148224	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00510000047967	ENSGT00390000005497.p	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00910000148224	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00510000047967	ENSGT00390000005497.p	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00910000148224	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00390000000153.l.a.cb.h.b	ENSGT00510000047967	ENSGT00390000005497.p	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a
Macaca	ANCESTRAL SPECIES	5	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00910000148224	ENSGT00390000005214	ENSGT00940000155048	ENSGT00390000000153.l.a.cb.h.b	ENSGT00510000047967	ENSGT00390000005497.p	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT01050000245604.A	ENSGT01100000263493.a.a.a.b.a.a.a.a.a.a.a.b.b.b	ENSGT00510000047967	ENSGT00390000005497.p	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297.p.b	ENSGT00940000157205	ENSGT00940000154280
Rhesus	MODERN SPECIES	11	ATXN7 (ENSMMUG00000001508)	THOC7 (ENSMMUG00000012783)	C2H3orf49 (ENSMMUG00000012780)	SNTN (ENSMMUG00000062888)	SYNPR (ENSMMUG00000023718)	ENSMMUG00000031902 ##17	FEZF2 (ENSMMUG00000021592)	C2H3orf14 (ENSMMUG00000055858)	ENSMMUG00000049870	PTPRG (ENSMMUG00000012487)	ENSMMUG00000063860	ENSMMUG00000065043	FHIT (ENSMMUG00000012832)	ENSMMUG00000061324	CFAP20DC (ENSMMUG00000021205)	FAM3D (ENSMMUG00000043629) ##22	FAM107A (ENSMMUG00000064614)	ENSMMUG00000063800	ACOX2 (ENSMMUG00000006229)	KCTD6 (ENSMMUG00000031896)	PDHB (ENSMMUG00000015672)	PXK (ENSMMUG00000006432)	RPP14 (ENSMMUG00000002841)	ABHD6 (ENSMMUG00000006315)	DNASE1L3 (ENSMMUG00000011235)	FLNB (ENSMMUG00000000706)	ENSMMUG00000064837	SLMAP (ENSMMUG00000004800)	DENND6A (ENSMMUG00000018619)	ARF4 (ENSMMUG00000018617)	PDE12 (ENSMMUG00000004052)
Crab-eating macaque	MODERN SPECIES	11	THOC7 (ENSMFAG00000032653)	C3orf49 (ENSMFAG00000014502)	SNTN (ENSMFAG00000041510)	SYNPR (ENSMFAG00000039535)	CADPS (ENSMFAG00000037884)	FEZF2 (ENSMFAG00000039881)	C3orf14 (ENSMFAG00000058151)	ENSMFAG00000050866	PTPRG (ENSMFAG00000044130)	ENSMFAG00000003368	ENSMFAG00000054468	ENSMFAG00000059503	FHIT (ENSMFAG00000040773)	ENSMFAG00000062846	CFAP20DC (ENSMFAG00000002952)	FAM3D (ENSMFAG00000063776) ##22	FAM107A (ENSMFAG00000057310)	ACOX2 (ENSMFAG00000033938)	KCTD6 (ENSMFAG00000040632)	PDHB (ENSMFAG00000032932)	PXK (ENSMFAG00000031688)	RPP14 (ENSMFAG00000054440)	HTD2 (ENSMFAG00000003971)	ENSMFAG00000050622	ABHD6 (ENSMFAG00000022753)	DNASE1L3 (ENSMFAG00000042137)	FLNB (ENSMFAG00000003065)	ENSMFAG00000054539	ENSMFAG00000049790	SLMAP (ENSMFAG00000038300)	ENSMFAG00000060596
Pig-tailed macaque	MODERN SPECIES	106	PRICKLE2 (ENSMNEG00000017820)	PSMD6 (ENSMNEG00000028262)	ATXN7 (ENSMNEG00000037292)	THOC7 (ENSMNEG00000035012)	C3orf49 (ENSMNEG00000002764)	SNTN (ENSMNEG00000032350)	SYNPR (ENSMNEG00000037219)	CADPS (ENSMNEG00000043979)	ENSMNEG00000027707	C3orf14 (ENSMNEG00000039569)	FEZF2 (ENSMNEG00000041706)	PTPRG (ENSMNEG00000031869)	ENSMNEG00000041448	FHIT (ENSMNEG00000040755)	CFAP20DC (ENSMNEG00000030469)	FAM3D (ENSMNEG00000036367) ##22	FAM107A (ENSMNEG00000042838)	ACOX2 (ENSMNEG00000032610)	KCTD6 (ENSMNEG00000040452)	PDHB (ENSMNEG00000036075)	PXK (ENSMNEG00000033433)	HTD2 (ENSMNEG00000035045)	RPP14 (ENSMNEG00000028567)	ABHD6 (ENSMNEG00000037859)	ENSMNEG00000001241	DNASE1L3 (ENSMNEG00000034780)	FLNB (ENSMNEG00000035632)	SLMAP (ENSMNEG00000032830)	DENND6A (ENSMNEG00000004566)	ARF4 (ENSMNEG00000034663)	PDE12 (ENSMNEG00000030068)
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00390000000153.l.a.cb.h.b	ENSGT00510000047967	ENSGT00390000005497.o.a	ENSGT00390000018085.a.a.a.a	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a
Cercopithecinae_d	ANCESTRAL SPECIES	12	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00630000090979	ENSGT00390000000153.l.a.cb.h.b	ENSGT00510000047967	ENSGT00390000005497.p	ENSGT00390000018085.a.a.a.a	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a
Sooty mangabey	MODERN SPECIES	650	ATXN7 (ENSCATG00000044553)	THOC7 (ENSCATG00000038732)	C3orf49 (ENSCATG00000041531)	SNTN (ENSCATG00000038530)	SYNPR (ENSCATG00000000279)	ENSCATG00000043197	ENSCATG00000007026 ##17	FEZF2 (ENSCATG00000038119)	C3orf14 (ENSCATG00000041520)	PTPRG (ENSCATG00000040252)	ENSCATG00000016623	ENSCATG00000001678	FHIT (ENSCATG00000036063)	ENSCATG00000022026	CFAP20DC (ENSCATG00000033800)	FAM3D (ENSCATG00000042717) ##22	FAM107A (ENSCATG00000036228)	ACOX2 (ENSCATG00000038077)	KCTD6 (ENSCATG00000032690)	PDHB (ENSCATG00000033647)	PXK (ENSCATG00000040881)	HTD2 (ENSCATG00000036301)	RPP14 (ENSCATG00000044209)	ABHD6 (ENSCATG00000043430)	DNASE1L3 (ENSCATG00000033881)	FLNB (ENSCATG00000043450)	SLMAP (ENSCATG00000034577)	DENND6A (ENSCATG00000033270)	ARF4 (ENSCATG00000044002)	PDE12 (ENSCATG00000044539)	ENSCATG00000035398
Drill	MODERN SPECIES	1271								CADPS (ENSMLEG00000029573)	FEZF2 (ENSMLEG00000040394)	C3orf14 (ENSMLEG00000033197)	PTPRG (ENSMLEG00000007529)	ENSMLEG00000031389	FHIT (ENSMLEG00000032123)	CFAP20DC (ENSMLEG00000043296)	ENSMLEG00000026687	FAM3D (ENSMLEG00000037201) ##22	FAM107A (ENSMLEG00000042308)	ACOX2 (ENSMLEG00000023406)	KCTD6 (ENSMLEG00000040120)	PDHB (ENSMLEG00000042649)	PXK (ENSMLEG00000035460)	RPP14 (ENSMLEG00000025255)	HTD2 (ENSMLEG00000032919)	ABHD6 (ENSMLEG00000034439)	ENSMLEG00000007909	DNASE1L3 (ENSMLEG00000039348)	FLNB (ENSMLEG00000030068)	SLMAP (ENSMLEG00000027108)	DENND6A (ENSMLEG00000044187)	ARF4 (ENSMLEG00000038341)	PDE12 (ENSMLEG00000036137)
Olive baboon	MODERN SPECIES	11	C3orf49 (ENSPANG00000011418)	ENSPANG00000041214	SYNPR (ENSPANG00000021872)	ENSPANG00000015659 ##17	ENSPANG00000042442	FEZF2 (ENSPANG00000015063)	C3orf14 (ENSPANG00000020596)	PTPRG (ENSPANG00000005383)	ENSPANG00000041030	ENSPANG00000037541	FHIT (ENSPANG00000018461)	ENSPANG00000044281	ENSPANG00000045192	ENSPANG00000015061	ENSPANG00000049946	FAM3D (ENSPANG00000031785) ##22	FAM107A (ENSPANG00000020595)	ACOX2 (ENSPANG00000005667)	KCTD6 (ENSPANG00000032615)	PDHB (ENSPANG00000019216)	PXK (ENSPANG00000001127)	RPP14 (ENSPANG00000006374)	ABHD6 (ENSPANG00000015059)	DNASE1L3 (ENSPANG00000008562)	FLNB (ENSPANG00000018826)	SLMAP (ENSPANG00000006014)	DENND6A (ENSPANG00000012146)	ARF4 (ENSPANG00000006704)	PDE12 (ENSPANG00000007324)	DNAH12 (ENSPANG00000013369)	ENSPANG00000032702
Vervet Monkey	MODERN SPECIES	14	MAGI1 (ENSCSAG00000011889)	ADAMTS9 (ENSCSAG00000011951)	PRICKLE2 (ENSCSAG00000011960)	PSMD6 (ENSCSAG00000011965)	ATXN7 (ENSCSAG00000011977)	THOC7 (ENSCSAG00000011986)	C3orf49 (ENSCSAG00000011999)	SYNPR (ENSCSAG00000012010)	ENSCSAG00000012025 ##17	FEZF2 (ENSCSAG00000012034)	C3orf14 (ENSCSAG00000012039)	PTPRG (ENSCSAG00000012056)	ENSCSAG00000012066	ENSCSAG00000012082	ENSCSAG00000012092	FAM3D (ENSCSAG00000012100) ##22	FAM107A (ENSCSAG00000012116)	ACOX2 (ENSCSAG00000012133)	KCTD6 (ENSCSAG00000012148)	PDHB (ENSCSAG00000012153)	PXK (ENSCSAG00000012166)	HTD2 (ENSCSAG00000018798)	RPP14 (ENSCSAG00000012176)	ABHD6 (ENSCSAG00000012185)	DNASE1L3 (ENSCSAG00000012190)	FLNB (ENSCSAG00000012217)	SLMAP (ENSCSAG00000012241)	DENND6A (ENSCSAG00000012260)	ARF4 (ENSCSAG00000012271)	PDE12 (ENSCSAG00000012275)	ENSCSAG00000018796
Rhinopithecus	ANCESTRAL SPECIES	173														ENSGT00510000047967	ENSGT00390000005497.p	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000155481.u.a
Golden snub-nosed monkey	MODERN SPECIES	881															ENSRROG00000028325	FAM3D (ENSRROG00000033238) ##22	FAM107A (ENSRROG00000044494)	ACOX2 (ENSRROG00000042193)	KCTD6 (ENSRROG00000035541)	PDHB (ENSRROG00000004890)	PXK (ENSRROG00000044268)	HTD2 (ENSRROG00000030647)	RPP14 (ENSRROG00000045678)	ABHD6 (ENSRROG00000037362)	DNASE1L3 (ENSRROG00000044465)	FLNB (ENSRROG00000041820)	ENSRROG00000026669	SLMAP (ENSRROG00000041937)	DENND6A (ENSRROG00000039060)	ARF4 (ENSRROG00000034971)	PDE12 (ENSRROG00000031279)
Black snub-nosed monkey	MODERN SPECIES	1174														FHIT (ENSRBIG00000024516)	CFAP20DC (ENSRBIG00000043143)	FAM3D (ENSRBIG00000038367) ##22	FAM107A (ENSRBIG00000027909)	ACOX2 (ENSRBIG00000044259)	KCTD6 (ENSRBIG00000033835)	PDHB (ENSRBIG00000030636)	PXK (ENSRBIG00000031289)	HTD2 (ENSRBIG00000029042)	RPP14 (ENSRBIG00000031797)	ABHD6 (ENSRBIG00000034261)	DNASE1L3 (ENSRBIG00000029448)	FLNB (ENSRBIG00000028391)	ENSRBIG00000032653	SLMAP (ENSRBIG00000040826)	DENND6A (ENSRBIG00000035704)	ARF4 (ENSRBIG00000034461)	PDE12 (ENSRBIG00000040704)
Platyrrhini	ANCESTRAL SPECIES	18	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00910000147889	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Cebidae	ANCESTRAL SPECIES	14	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00910000147889	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280	ENSGT00940000156550
Cebidae_a	ANCESTRAL SPECIES	24	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00950000183306	ENSGT00910000147889	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00940000156286.pb	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00540000070023.c.a.b.l.a	ENSGT00940000156297	ENSGT00940000157205	ENSGT00940000154280
Capuchin	MODERN SPECIES	48	PRICKLE2 (ENSCCAG00000016463)	PSMD6 (ENSCCAG00000034649)	ATXN7 (ENSCCAG00000023325)	THOC7 (ENSCCAG00000001638)	C3orf49 (ENSCCAG00000026972)	SNTN (ENSCCAG00000027577)	SYNPR (ENSCCAG00000033216)	CADPS (ENSCCAG00000024148)	ENSCCAG00000034106	FEZF2 (ENSCCAG00000024939)	C3orf14 (ENSCCAG00000033614)	PTPRG (ENSCCAG00000018758)	FHIT (ENSCCAG00000034976)	WDR53 (ENSCCAG00000002009)	CFAP20DC (ENSCCAG00000032271)	FAM3D (ENSCCAG00000035965) ##22	FAM107A (ENSCCAG00000025613)	ACOX2 (ENSCCAG00000036274)	KCTD6 (ENSCCAG00000032258)	PDHB (ENSCCAG00000023841)	PXK (ENSCCAG00000031467)	RPP14 (ENSCCAG00000033002)	ABHD6 (ENSCCAG00000027507)	DNASE1L3 (ENSCCAG00000024544)	FLNB (ENSCCAG00000036094)	SLMAP (ENSCCAG00000020439)	SNRPD1 (ENSCCAG00000020611)	DENND6A (ENSCCAG00000036911)	ENSCCAG00000037598	ENSCCAG00000023440	PDE12 (ENSCCAG00000031290)
Bolivian squirrel monkey	MODERN SPECIES	217														FHIT (ENSSBOG00000028228)	CFAP20DC (ENSSBOG00000022223)	FAM3D (ENSSBOG00000009473) ##22	FAM107A (ENSSBOG00000018133)	ACOX2 (ENSSBOG00000022529)	KCTD6 (ENSSBOG00000024445)
Marmoset	MODERN SPECIES	6	PSMD6 (ENSCJAG00000019540)	ATXN7 (ENSCJAG00000019570)	ENSCJAG00000081411	THOC7 (ENSCJAG00000034899)	C3orf49 (ENSCJAG00000019599)	SNTN (ENSCJAG00000041591)	SYNPR (ENSCJAG00000019605)	ENSCJAG00000086397	ENSCJAG00000077198	ENSCJAG00000019620 ##17	C3orf14 (ENSCJAG00000068672)	FEZF2 (ENSCJAG00000079813)	PTPRG (ENSCJAG00000019680)	FHIT (ENSCJAG00000019708)	CFAP20DC (ENSCJAG00000019711)	FAM3D (ENSCJAG00000019719) ##22	FAM107A (ENSCJAG00000019725)	ACOX2 (ENSCJAG00000019727)	KCTD6 (ENSCJAG00000077075)	ENSCJAG00000019739	PXK (ENSCJAG00000019744)	DNASE1L3 (ENSCJAG00000019760)	FLNB (ENSCJAG00000019764)	ENSCJAG00000074595	SLMAP (ENSCJAG00000019871)	ENSCJAG00000067423	DENND6A (ENSCJAG00000019910)	ARF4 (ENSCJAG00000040282)	PDE12 (ENSCJAG00000019905)	DNAH12 (ENSCJAG00000031846)	ENSCJAG00000014737
Mas night monkey	MODERN SPECIES	625									ENSANAG00000027885 ##17	ENSANAG00000032183	FEZF2 (ENSANAG00000027542)	C3orf14 (ENSANAG00000036031)	PTPRG (ENSANAG00000036437)	FHIT (ENSANAG00000027270)	CFAP20DC (ENSANAG00000035433)	FAM3D (ENSANAG00000025080) ##22	FAM107A (ENSANAG00000032782)	ACOX2 (ENSANAG00000024736)	KCTD6 (ENSANAG00000025890)	ENSANAG00000019782	PXK (ENSANAG00000031813)	ENSANAG00000018785	ENSANAG00000028778	ABHD6 (ENSANAG00000020339)	DNASE1L3 (ENSANAG00000037772)	FLNB (ENSANAG00000036066)	SLMAP (ENSANAG00000034506)	DENND6A (ENSANAG00000024277)
Platypus	MODERN SPECIES	84	ENSOANG00000012850	SLC25A26 (ENSOANG00000021347)	MAGI1 (ENSOANG00000030734)	ADAMTS9 (ENSOANG00000002273)	PRICKLE2 (ENSOANG00000011930)	ATXN7 (ENSOANG00000044322)	THOC7 (ENSOANG00000050840)	C3orf49 (ENSOANG00000000242)	SYNPR (ENSOANG00000001762)	ENSOANG00000006013 ##17	FEZF2 (ENSOANG00000006012)	ENSOANG00000043273	PTPRG (ENSOANG00000006011)	ENSOANG00000050573	ENSOANG00000042553	FAM3D (ENSOANG00000001686) ##22	ENSOANG00000038535	ACOX2 (ENSOANG00000022188)	KCTD6 (ENSOANG00000047869)	PDHB (ENSOANG00000022190)	PXK (ENSOANG00000012932)	HTD2 (ENSOANG00000044016)	ENSOANG00000040726	ABHD6 (ENSOANG00000049067)	ENSOANG00000051039	DNASE1L3 (ENSOANG00000050327)	ENSOANG00000047153	FLNB (ENSOANG00000013849)	SLMAP (ENSOANG00000013848)	DENND6A (ENSOANG00000012888)	ENSOANG00000012887
Anura	ANCESTRAL SPECIES	52	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00390000007318	ENSGT00940000164126	ENSGT01010000229997	ENSGT00980000202009	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00390000005497	ENSGT00950000183004.a.a.a.a ##22	ENSGT00940000163282.e.a	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297
Frog	MODERN SPECIES	4	ENSXETG00000038272	ENSXETG00000037421	synpr (ENSXETG00000044908)	ENSXETG00000048041	ENSXETG00000046743	cadps (ENSXETG00000022243) ##17	fezf2 (ENSXETG00000022248)	C3orf14 (ENSXETG00000035030)	ptprg (ENSXETG00000033844)	ENSXETG00000044524	ENSXETG00000048395	ENSXETG00000047716	ENSXETG00000044867	cfap20dc (ENSXETG00000000564)	ENSXETG00000043914	fam3d (ENSXETG00000025698) ##22	ENSXETG00000037274	ENSXETG00000048371	ENSXETG00000037278	MGC107780 (ENSXETG00000008638)	fam107a (ENSXETG00000046417)	pde12 (ENSXETG00000008653)	arf4 (ENSXETG00000008654)	dennd6a (ENSXETG00000008657)	slmap (ENSXETG00000042040)	flnb (ENSXETG00000008663)	ENSXETG00000035388	dnase1l3 (ENSXETG00000008665)	abhd6 (ENSXETG00000008670)	ENSXETG00000044285	HTD2 (ENSXETG00000035998)
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000017825	ENSLLEG00000017849	ENSLLEG00000017975 ##17	ENSLLEG00000020669	ENSLLEG00000020710	FEZF2 (ENSLLEG00000020750)	C3orf14 (ENSLLEG00000020885)	PTPRG (ENSLLEG00000021000)	ENSLLEG00000022574	ENSLLEG00000022592	ENSLLEG00000022685	ENSLLEG00000022700	ENSLLEG00000022720	ENSLLEG00000022740	ENSLLEG00000022798	FAM3D (ENSLLEG00000023115) ##22	ENSLLEG00000023297	ENSLLEG00000023328	FAM107A (ENSLLEG00000023599)	ACOX2 (ENSLLEG00000023737)	KCTD6 (ENSLLEG00000025329)	PDHB (ENSLLEG00000025416)	PXK (ENSLLEG00000025922)	HTD2 (ENSLLEG00000026092)	RPP14 (ENSLLEG00000026138)	ABHD6 (ENSLLEG00000026195)	FLNB (ENSLLEG00000026297)	SLMAP (ENSLLEG00000026862)	DENND6A (ENSLLEG00000027744)	ARF4 (ENSLLEG00000028009)	PDE12 (ENSLLEG00000028037)
Coelacanth	MODERN SPECIES	632															CFAP20DC (ENSLACG00000006842)	FAM3D (ENSLACG00000010238) ##22	FAM107A (ENSLACG00000011575)	ACOX2 (ENSLACG00000012008)	ENSLACG00000012170	ENSLACG00000012220	PDHB (ENSLACG00000012309)	PXK (ENSLACG00000012402)	HTD2 (ENSLACG00000012813)	ABHD6 (ENSLACG00000013052)	FLNB (ENSLACG00000013413)	SLMAP (ENSLACG00000014699)	DENND6A (ENSLACG00000015156)	ARF4 (ENSLACG00000015381)	PDE12 (ENSLACG00000015492)	atp6ap1lb (ENSLACG00000015549)	RPS23 (ENSLACG00000015609)
Cyclostomata	DUPLICATION
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a.c ##22
Hagfish	MODERN SPECIES	1308	SCAPER (ENSEBUG00000004562)	ENSEBUG00000001623	isl1a (ENSEBUG00000016346)	ENSEBUG00000010417	ndufs4 (ENSEBUG00000015074)	ENSEBUG00000010606	apc (ENSEBUG00000015476)	rps15 (ENSEBUG00000012933)	ENSEBUG00000009275	ENSEBUG00000011079	ENSEBUG00000016816	ENSEBUG00000016052	xpot (ENSEBUG00000007650)	ENSEBUG00000009361	ENSEBUG00000006757	ENSEBUG00000000618 ##22	ENSEBUG00000012876
Lamprey	MODERN SPECIES	1273															ENSPMAG00000008865	ENSPMAG00000008858 ##22	tktb (ENSPMAG00000008826)	fbxl14a (ENSPMAG00000008823)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.a.d ##22
Lamprey	MODERN SPECIES	3666																ENSPMAG00000006027 ##22
Hagfish	MODERN SPECIES	334				ENSEBUG00000002803	ENSEBUG00000001722	sec13 (ENSEBUG00000002245)	cand1 (ENSEBUG00000002135)	ENSEBUG00000012856	tat (ENSEBUG00000010600)	ndufs2 (ENSEBUG00000013742)	ENSEBUG00000009438	ENSEBUG00000000868	ENSEBUG00000012632	ENSEBUG00000012982	ENSEBUG00000015085	ENSEBUG00000017075 ##22	ENSEBUG00000008307	GRIP2 (ENSEBUG00000001042)	trnt1 (ENSEBUG00000012779)
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b ##22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b ##22
Euteleostomi	ANCESTRAL SPECIES	279										ENSGT00550000074803	ENSGT00390000016224	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00390000008992	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614
Actinopterygii	ANCESTRAL SPECIES	362													ENSGT00390000015154	ENSGT00940000164755.A	ENSGT00530000063168.a.a.b	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614
Neopterygii	ANCESTRAL SPECIES	168						ENSGT00940000153629.a.b	ENSGT01030000234637.b.c	ENSGT00940000159855	ENSGT00390000008631.b	ENSGT00940000163880	ENSGT00390000017780.e	ENSGT00950000183102.C	ENSGT00390000015154	ENSGT00940000164755.A	ENSGT00530000063168.a.a.b	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00390000016224	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00940000167208	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000008992	ENSGT00390000000950.c.a
Osteoglossocephalai	ANCESTRAL SPECIES	103			ENSGT00940000154256.`c	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00550000074803	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000182824.a.b.b.c	ENSGT00950000183006.A.a.b	ENSGT00530000063808.a	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT01030000240148	ENSGT00390000000950.c.a	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00950000182835.c.c.g.a	ENSGT00940000164454	ENSGT00950000182835.c.c.g.b	ENSGT00940000162980	ENSGT00950000182994.B.a.a.a	ENSGT00940000167069
Osteoglossiformes	ANCESTRAL SPECIES	318							ENSGT00940000166246.A	ENSGT00530000063435.a.d	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00530000063808.a.h	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a.e	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b.db.b	ENSGT00950000182989.D.a.a.a.f	ENSGT00940000160145.b.eb	ENSGT00940000157847.o	ENSGT00940000156319.o	ENSGT00940000157506.e	ENSGT00390000010825.a
Asian bonytongue	MODERN SPECIES	10	ptges3a (ENSSFOG00015030993)	ENSSFOG00015003355	dtx3 (ENSSFOG00015003347)	RND1 (ENSSFOG00015003311)	CACNB3 (ENSSFOG00015002480)	ADCY6 (ENSSFOG00015002378)	galnt6 (ENSSFOG00015002330)	G6PD (ENSSFOG00015002261)	zgc:158263 (ENSSFOG00015002183)	naa10 (ENSSFOG00015002127)	arhgap4a (ENSSFOG00015002112)	ikbkg (ENSSFOG00015002062)	SSR4 (ENSSFOG00015002046)	AVPR2 (ENSSFOG00015002009)	idh3g (ENSSFOG00015001955)	fam3a (ENSSFOG00015001920) ##22	ENSSFOG00015001777	ENSSFOG00015024887	phf8 (ENSSFOG00015001667)	HUWE1 (ENSSFOG00015001314)	l1cama (ENSSFOG00015001266)	ribc1 (ENSSFOG00015001204)	pfkfb1 (ENSSFOG00015001150)	ENSSFOG00015001038	gdi1 (ENSSFOG00015000981)	atp6ap1a (ENSSFOG00015000968)	dnase1l1l (ENSSFOG00015000930)	rpl10 (ENSSFOG00015000901)	ENSSFOG00015000775	atp2b3a (ENSSFOG00015000684)	ugt5e1 (ENSSFOG00015000634)
P. kingsleyae	MODERN SPECIES	29				atf7a (ENSPKIG00000016778)	SCN8A (ENSPKIG00000016733)	dtx3 (ENSPKIG00000016692)	naca (ENSPKIG00000016613)	ptges3a (ENSPKIG00000016562)	ENSPKIG00000016533	galnt6 (ENSPKIG00000016490)	naa10 (ENSPKIG00000016446)	ikbkg (ENSPKIG00000016357)	ENSPKIG00000016312	ssr4 (ENSPKIG00000016289)	idh3g (ENSPKIG00000016241)	fam3a (ENSPKIG00000016195) ##22	ENSPKIG00000015997	HUWE1 (ENSPKIG00000015785)	l1cama (ENSPKIG00000015616)	pfkfb1 (ENSPKIG00000015559)	CASR (ENSPKIG00000015540)	GJD2 (ENSPKIG00000015516)	taf13 (ENSPKIG00000015501)	kptn (ENSPKIG00000015461)	UPK1B (ENSPKIG00000015419)	ENSPKIG00000015385	alkbh6 (ENSPKIG00000015358)	ENSPKIG00000015312	capns1a (ENSPKIG00000015255)	fpgt (ENSPKIG00000015211)	ENSPKIG00000015107
Clupeocephala	ANCESTRAL SPECIES	94	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00390000016224	ENSGT00950000182824.a.b.b.d	ENSGT00950000182824.a.b.b.c	ENSGT00950000183006.A.a.b	ENSGT00530000063808.a	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00950000182835.c.c.g.a	ENSGT00940000164454	ENSGT00940000160207.b	ENSGT00940000155094.b	ENSGT00950000182835.c.c.g.b	ENSGT00940000162980	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650.i	ENSGT00940000167069
Otomorpha	ANCESTRAL SPECIES	22	ENSGT00940000177752	ENSGT00940000166246.B	ENSGT00530000063435.a.a.a	ENSGT00550000074803	ENSGT00390000016224	ENSGT00950000182824.a.b.b.c.e	ENSGT00950000183006.A.a.b	ENSGT00530000063808.a	ENSGT00390000008992	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00950000182824.a.b.b.c.f	ENSGT01050000244882.b.c.b.a.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000156107.e.a	ENSGT00940000164713	ENSGT00980000203442	ENSGT00940000156561.a.a	ENSGT00940000159962	ENSGT01070000253744.a.a.a.a	ENSGT00940000157899.a.b.b	ENSGT01090000260051.b.a.a.a	ENSGT00940000155250.q.a	ENSGT00940000155489.b	ENSGT01050000244890.a.b.b.c.b	ENSGT00390000012629	ENSGT00940000164283.b.a	ENSGT00940000156458.e.a
Clupeiformes	ANCESTRAL SPECIES	2	ENSGT00940000161971	ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.b	ENSGT00940000167208	ENSGT00950000182824.a.b.b.c.f	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000156107.e.a	ENSGT00940000164713	ENSGT00940000156561.a.a	ENSGT00940000159962	ENSGT01070000253744.a.a.a.a	ENSGT00940000155250.q.a	ENSGT00940000155489.b	ENSGT01050000244890.a.b.b.c.b	ENSGT00390000012629	ENSGT00940000164283.b.a	ENSGT00940000156458.f	ENSGT00950000183025.b.b.e.a	ENSGT00940000161087.i.b	ENSGT00940000161087.i.a
Atlantic herring	MODERN SPECIES	20	FIGNL2 (ENSCHAG00000024124)	stat6 (ENSCHAG00000024133)	mipa (ENSCHAG00000024180)	ptges3a (ENSCHAG00000024182)	dtx3 (ENSCHAG00000024186)	ENSCHAG00000024192	rnd1b (ENSCHAG00000024197)	CACNB3 (ENSCHAG00000024204)	ADCY6 (ENSCHAG00000024297)	galnt6 (ENSCHAG00000025436)	G6PD (ENSCHAG00000025470)	zgc:158263 (ENSCHAG00000025650)	arhgap4a (ENSCHAG00000025658)	AVPR2 (ENSCHAG00000025705)	idh3g (ENSCHAG00000025715)	fam3a (ENSCHAG00000025778) ##22	ENSCHAG00000025785	ENSCHAG00000025787	erbb3b (ENSCHAG00000025795)	pa2g4b (ENSCHAG00000025882)	ENSCHAG00000026007	ENSCHAG00000026013	ENSCHAG00000026020	ENSCHAG00000026023	ENSCHAG00000026030	ESYT1 (ENSCHAG00000026062)	fmnl3 (ENSCHAG00000026269)	ENSCHAG00000026619	rbms2b (ENSCHAG00000026631)	ENSCHAG00000026771	FAIM2 (ENSCHAG00000026778)
Denticle herring	MODERN SPECIES	1	dip2ba (ENSDCDG00000017766)	scn8aa (ENSDCDG00000014906)	FIGNL2 (ENSDCDG00000014847)	stat6 (ENSDCDG00000014813)	mipa (ENSDCDG00000014793)	ptges3a (ENSDCDG00000014784)	dtx3 (ENSDCDG00000014772)	RND1 (ENSDCDG00000014759)	CACNB3 (ENSDCDG00000009942)	ADCY6 (ENSDCDG00000005446)	galnt6 (ENSDCDG00000005384)	arhgap4a (ENSDCDG00000005373)	SSR4 (ENSDCDG00000005368)	AVPR2 (ENSDCDG00000005367)	idh3g (ENSDCDG00000004857)	fam3a (ENSDCDG00000004787) ##22	ENSDCDG00000004767	erbb3b (ENSDCDG00000004294)	igfbp6b (ENSDCDG00000004262)	spryd3 (ENSDCDG00000004258)	ENSDCDG00000004252	zgc:174906 (ENSDCDG00000004247)	csad (ENSDCDG00000004195)	znf740b (ENSDCDG00000004192)	nfe2 (ENSDCDG00000004189)	ENSDCDG00000004186	cbx5 (ENSDCDG00000004185)	ENSDCDG00000004182	hoxc4a (ENSDCDG00000004178)	hoxc8a (ENSDCDG00000004176)	hoxc9a (ENSDCDG00000004174)
Otophysi	ANCESTRAL SPECIES	2	ENSGT00940000156477.d.a	ENSGT00950000182872.f.a.a.a.b	ENSGT00940000160331	ENSGT00390000018330	ENSGT00940000160318.c.b	ENSGT00940000154681.b.d	ENSGT00980000199461	ENSGT00940000163461.b	ENSGT00390000016224	ENSGT00950000182824.a.b.b.c.e	ENSGT00950000183006.A.a.b	ENSGT00530000063808.a	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000156107.e.a	ENSGT00940000164713	ENSGT00980000203442	ENSGT00940000156561.a.a	ENSGT00940000159962	ENSGT01070000253744.a.a.a.a	ENSGT00940000157899.a.b.b	ENSGT01090000260051.b.a.a.a	ENSGT00940000155250.q.a	ENSGT00940000155489.b	ENSGT01050000244890.a.b.b.c.b	ENSGT00530000063693.b	ENSGT00940000161086	ENSGT00940000157965.d
Characiphysae	ANCESTRAL SPECIES	16	ENSGT00940000177198	ENSGT00940000159884	ENSGT00390000006696	ENSGT00950000182932.C.b	ENSGT00940000159728	ENSGT00940000165811	ENSGT00940000166581	ENSGT00940000165935	ENSGT00950000183003.a.b	ENSGT00510000046843.a.b.k	ENSGT00940000159698	ENSGT00950000182824.a.b.b.c.f	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000156107.e.a	ENSGT00940000164713	ENSGT00980000203442	ENSGT00940000156561.a.a	ENSGT00940000159962	ENSGT00940000157899.a.b.b	ENSGT01090000260051.b.a.a.a	ENSGT00940000155250.q.a	ENSGT00940000155489.b	ENSGT01050000244890.a.b.b.c.b	ENSGT00530000063693.b	ENSGT00940000161086	ENSGT00940000157965.d	ENSGT00940000155407
Characiphysae_b	ANCESTRAL SPECIES	8	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00950000182696.B.b.b	ENSGT00390000018330	ENSGT00940000163461.b	ENSGT00390000016224	ENSGT00950000182824.a.b.b.c.e	ENSGT00950000183006.A.a.b	ENSGT00530000063808.a	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000156107.e.a	ENSGT00940000164713	ENSGT00980000203442	ENSGT00940000156561.a.a	ENSGT00940000159962	ENSGT01090000260051.b.a.a.a	ENSGT00940000157899.a.b.b	ENSGT00940000155250.q.a	ENSGT00940000155489.b	ENSGT01050000244890.a.b.b.c.b	ENSGT00530000063693.b	ENSGT00940000161086	ENSGT00940000157965.d	ENSGT00940000155407
Characoidei	ANCESTRAL SPECIES	8	ENSGT00940000158950	ENSGT01090000260003.a.b.b.a.a.b.b.a.k	ENSGT00390000002407.c	ENSGT00950000183056.B.a.h	ENSGT00520000055567.a.a.a	ENSGT00950000182696.B.b.b	ENSGT00390000018330	ENSGT00940000163461.b	ENSGT00390000016224	ENSGT00950000182824.a.b.b.c.e	ENSGT00950000183006.A.a.b	ENSGT00530000063808.a	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000156107.e.a	ENSGT00940000164713	ENSGT00980000203442	ENSGT00940000156561.a.a	ENSGT00940000159962	ENSGT00940000157899.a.b.b	ENSGT01090000260051.b.a.a.a	ENSGT00940000155250.q.a	ENSGT00940000155489.b	ENSGT01050000244890.a.b.b.c.b	ENSGT00530000063693.b	ENSGT00940000161086	ENSGT00940000157965.d	ENSGT00940000155407
Red-bellied piranha	MODERN SPECIES	32	TSHZ2 (ENSPNAG00000020910)	ENSPNAG00000020904	znf217 (ENSPNAG00000020890)	PFDN4 (ENSPNAG00000020866)	ENSPNAG00000020842	cbln4 (ENSPNAG00000020840)	ENSPNAG00000020824	irx7 (ENSPNAG00000020808)	ENSPNAG00000020788	PLEKHG5 (ENSPNAG00000020727)	casp9 (ENSPNAG00000020640)	arhgap4a (ENSPNAG00000020564)	SSR4 (ENSPNAG00000003648)	AVPR2 (ENSPNAG00000020379)	idh3g (ENSPNAG00000020360)	fam3a (ENSPNAG00000020330) ##22	ENSPNAG00000020302	erbb3b (ENSPNAG00000020247)	pa2g4b (ENSPNAG00000020217)	ENSPNAG00000020152	ESYT1 (ENSPNAG00000005554)	fmnl3 (ENSPNAG00000020050)	LRP1 (ENSPNAG00000019827)	ENSPNAG00000019594	rbms2b (ENSPNAG00000019569)	ENSPNAG00000019504	ENSPNAG00000019391	fitm2 (ENSPNAG00000019383)	R3HDML (ENSPNAG00000019374)	hnf4a (ENSPNAG00000019345)	ttpal (ENSPNAG00000003585)
Mexicana tetra	MODERN SPECIES	6	PFDN4 (ENSAMXG00000031280)	ENSAMXG00000009362	ENSAMXG00000039052	cbln4 (ENSAMXG00000005306)	ENSAMXG00000034936	tssk6 (ENSAMXG00000000342)	cd40 (ENSAMXG00000041127)	irx7 (ENSAMXG00000000335)	ENSAMXG00000031946	ENSAMXG00000043356	ENSAMXG00000006216	ENSAMXG00000041537	arhgap4a (ENSAMXG00000037374)	AVPR2 (ENSAMXG00000043546)	idh3g (ENSAMXG00000018176)	fam3a (ENSAMXG00000042871) ##22	ENSAMXG00000037667	ENSAMXG00000039613	erbb3b (ENSAMXG00000018110)	PA2G4 (ENSAMXG00000018093)	ENSAMXG00000032680	ESYT1 (ENSAMXG00000018065)	fmnl3 (ENSAMXG00000030705)	ENSAMXG00000025183	LRP1 (ENSAMXG00000040036)	rbms2b (ENSAMXG00000017399)	ENSAMXG00000030203	fitm2 (ENSAMXG00000031336)	R3HDML (ENSAMXG00000031382)	hnf4a (ENSAMXG00000017366)	ttpal (ENSAMXG00000017348)
Electric eel	MODERN SPECIES	261														AVPR2 (ENSEEEG00000024039)	idh3g (ENSEEEG00000024028)	fam3a (ENSEEEG00000024024) ##22	ENSEEEG00000024021	erbb3b (ENSEEEG00000023999)	pa2g4b (ENSEEEG00000023996)	ESYT1 (ENSEEEG00000023949)	fmnl3 (ENSEEEG00000023915)	ENSEEEG00000023910	LRP1 (ENSEEEG00000023828)	rbms2b (ENSEEEG00000023809)	ENSEEEG00000023808	fitm2 (ENSEEEG00000023807)	R3HDML (ENSEEEG00000023806)	hnf4a (ENSEEEG00000023803)	ttpal (ENSEEEG00000023801)	ENSEEEG00000023800	ada (ENSEEEG00000023790)
Channel catfish	MODERN SPECIES	6	tshz2 (ENSIPUG00000019206)	ENSIPUG00000019212	ZNF217 (ENSIPUG00000019222)	pfdn4 (ENSIPUG00000019264)	CBLN4 (ENSIPUG00000019289)	ENSIPUG00000019305	cd40 (ENSIPUG00000019334)	irx7 (ENSIPUG00000019356)	ENSIPUG00000019362	plekhg5 (ENSIPUG00000019378)	casp9 (ENSIPUG00000019414)	arhgap4a (ENSIPUG00000019443)	SSR4 (ENSIPUG00000019496)	AVPR2 (ENSIPUG00000019575)	idh3g (ENSIPUG00000019597)	fam3a (ENSIPUG00000019634) ##22	ENSIPUG00000019655	erbb3 (ENSIPUG00000019692)	pa2g4b (ENSIPUG00000019716)	ESYT1 (ENSIPUG00000019741)	Fmnl3 (ENSIPUG00000019787)	LRP1 (ENSIPUG00000021231)	ENSIPUG00000021308	RBMS2 (ENSIPUG00000021323)	ENSIPUG00000021348	FAIM2 (ENSIPUG00000021383)	r3hdml (ENSIPUG00000021413)	hnf4a (ENSIPUG00000021425)	ttpal (ENSIPUG00000021511)	pkig (ENSIPUG00000021516)	ada (ENSIPUG00000021522)
Cyprinoidei	ANCESTRAL SPECIES		ENSGT00800000124176	ENSGT00940000155808	ENSGT00530000063607.a	ENSGT01040000240451.a.b.a	ENSGT01010000222360.B	ENSGT00940000160300	ENSGT00940000158083.a	ENSGT00940000157665.a	ENSGT00940000158631	ENSGT00940000158981	ENSGT00940000153668.A	ENSGT00940000159698	ENSGT00950000182824.a.b.b.c.f	ENSGT01050000244882.b.c.b.a.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000156107.e.a	ENSGT00940000164713	ENSGT00980000203442	ENSGT00940000156561.a.a	ENSGT00940000159962	ENSGT01070000253744.a.a.a.a	ENSGT00940000157899.a.b.b	ENSGT00940000159286.b	ENSGT00940000155250.q.a	ENSGT00940000155489.b	ENSGT01050000244890.a.b.b.c.b	ENSGT00530000063693.b	ENSGT00940000161086	ENSGT00940000157965.d
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	33	ENSGT00800000124176.m	ENSGT00940000155808.l	ENSGT00530000063607.a.r	ENSGT01040000240451.a.b.a.c	ENSGT01010000222360.B.b	ENSGT00940000160300.l.a	ENSGT00940000158083.a.a	ENSGT00940000157665.a.a	ENSGT00940000158631.b	ENSGT00940000158981.c	ENSGT00940000153668.A.l	ENSGT00940000159698.b	ENSGT00950000182824.a.b.b.c.f.b	ENSGT01050000244882.b.c.b.a.a.b	ENSGT00950000182989.D.a.a.a.b	ENSGT00950000183004.a.a.a.b.a ##22	ENSGT00940000160145.b.cb.a	ENSGT00940000156107.e.a.g	ENSGT00940000164713.b	ENSGT00940000156561.a.a.c	ENSGT00940000159962.g	ENSGT01070000253744.a.a.a.a	ENSGT00940000157899.a.b.b.a	ENSGT00940000155250.q.a.a.b	ENSGT00940000159286.b	ENSGT00940000155250.q.a.a.a.a	ENSGT00940000155489.b.b	ENSGT01050000244890.a.b.b.c.b.b	ENSGT00530000063693.b.e	ENSGT00940000161086.b	ENSGT00940000157965.d.f
Cyprininae_a	ANCESTRAL SPECIES	5	ENSGT00800000124176.m	ENSGT00940000155808.l	ENSGT00530000063607.a.r	ENSGT01040000240451.a.b.a.c	ENSGT01010000222360.B.b	ENSGT00940000160300.l.a	ENSGT00940000158083.a.a	ENSGT00940000157665.a.a	ENSGT00940000158631.b	ENSGT00940000158981.c	ENSGT00940000153668.A.l	ENSGT00940000159698.b	ENSGT00950000182824.a.b.b.c.f.b	ENSGT01050000244882.b.c.b.a.a.b	ENSGT00950000182989.D.a.a.a.b	ENSGT00950000183004.a.a.a.b.a ##22	ENSGT00940000160145.b.cb.a	ENSGT00940000156107.e.a.g	ENSGT00940000164713.b	ENSGT00940000156561.a.a.c	ENSGT00940000159962.g	ENSGT01070000253744.a.a.a.a	ENSGT00940000157899.a.b.b.a	ENSGT00940000155250.q.a.a.b	ENSGT00940000159286.b	ENSGT00940000155250.q.a.a.a.a	ENSGT00940000155489.b.b	ENSGT01050000244890.a.b.b.c.b.b	ENSGT00530000063693.b.e	ENSGT00940000161086.b	ENSGT00940000157965.d.f
Golden-line barbel	MODERN SPECIES	136	ENSSGRG00000000086	ENSSGRG00000049001	kansl2 (ENSSGRG00000048991)	ENSSGRG00000048986	ctdsp2 (ENSSGRG00000048975)	sdf4 (ENSSGRG00000048974)	c1qtnf12 (ENSSGRG00000048973)	olfml3a (ENSSGRG00000048972)	SYT6 (ENSSGRG00000048971)	klhl21 (ENSSGRG00000048970)	ENSSGRG00000048956	NOL9 (ENSSGRG00000048955)	casp9 (ENSSGRG00000048922)	AVPR2 (ENSSGRG00000048816)	idh3g (ENSSGRG00000048628)	fam3a (ENSSGRG00000048615) ##22	ENSSGRG00000048614	erbb3b (ENSSGRG00000048602)	pa2g4b (ENSSGRG00000048358)	ENSSGRG00000048349
Common carp reference	MODERN SPECIES	49	ENSCCRG00000046155	kansl2 (ENSCCRG00000046174)	ENSCCRG00000053406	ctdsp2 (ENSCCRG00000080842)	sdf4 (ENSCCRG00000066254)	c1qtnf12 (ENSCCRG00000056468)	olfml3a (ENSCCRG00000080143)	ENSCCRG00000065414	klhl21 (ENSCCRG00000015780)	ENSCCRG00000015784	NOL9 (ENSCCRG00000015792)	casp9 (ENSCCRG00000015795)	arhgap4a (ENSCCRG00000073653)	ENSCCRG00000062239	idh3g (ENSCCRG00000082896)	fam3a (ENSCCRG00000058415) ##22	ENSCCRG00000056741	erbb3b (ENSCCRG00000020160)	pa2g4b (ENSCCRG00000019353)	ENSCCRG00000045325	fmnl3 (ENSCCRG00000045563)	ENSCCRG00000066806	ENSCCRG00000027097	rbms2b (ENSCCRG00000011212)	ENSCCRG00000017074	ENSCCRG00000029015	fitm2 (ENSCCRG00000072615)	R3HDML (ENSCCRG00000017107)	hnf4a (ENSCCRG00000011233)	ttpal (ENSCCRG00000054721)	ENSCCRG00000011843
Goldfish	MODERN SPECIES	2973	kansl2 (ENSCARG00000069029)	ENSCARG00000069054	ctdsp2 (ENSCARG00000069063)	sdf4 (ENSCARG00000069077)	ENSCARG00000069087	c1qtnf12 (ENSCARG00000069097)	olfml3a (ENSCARG00000069109)	SYT6 (ENSCARG00000069115)	klhl21 (ENSCARG00000069125)	ZBTB48 (ENSCARG00000069132)	NOL9 (ENSCARG00000069149)	casp9 (ENSCARG00000069165)	arhgap4a (ENSCARG00000069197)	AVPR2 (ENSCARG00000069215)	idh3g (ENSCARG00000069297)	fam3a (ENSCARG00000069332) ##22	ENSCARG00000069355	erbb3b (ENSCARG00000069413)	pa2g4b (ENSCARG00000069491)	ENSCARG00000069578	fmnl3 (ENSCARG00000069777)	LRP1 (ENSCARG00000070131)	rbms2b (ENSCARG00000070347)	ENSCARG00000070353	FAIM2 (ENSCARG00000070358)	fitm2 (ENSCARG00000070360)	ENSCARG00000070362	hnf4a (ENSCARG00000070363)
Cyprininae	ANCESTRAL SPECIES	323	ENSGT00800000124176.n	ENSGT00940000155808.k	ENSGT00530000063607.a.q	ENSGT01040000240451.a.b.a.d	ENSGT01010000222360.B.a	ENSGT00940000160300.l.b	ENSGT00940000158083.a.b	ENSGT00940000157665.a.b	ENSGT00940000158631.a	ENSGT00940000158981.d	ENSGT00940000153668.A.k	ENSGT00940000159698.a	ENSGT00950000182824.a.b.b.c.f.a	ENSGT01050000244882.b.c.b.a.a.a	ENSGT00950000182989.D.a.a.a.a	ENSGT00950000183004.a.a.a.b.b ##22	ENSGT00940000160145.b.cb.b.a.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	42	lzic (ENSCARG00000051999)	clstn1 (ENSCARG00000052199)	ctnnbip1 (ENSCARG00000056099)	pik3cd (ENSCARG00000056173)	c1qtnf12 (ENSCARG00000057124)	olfml3a (ENSCARG00000057144)	SYT6 (ENSCARG00000057152)	ENSCARG00000057165	klhl21 (ENSCARG00000057175)	ZBTB48 (ENSCARG00000057210)	NOL9 (ENSCARG00000057575)	casp9 (ENSCARG00000057607)	arhgap4a (ENSCARG00000058079)	AVPR2 (ENSCARG00000058130)	idh3g (ENSCARG00000058144)	fam3a (ENSCARG00000058168) ##22	ENSCARG00000058220	PLXNA1 (ENSCARG00000058290)	ENSCARG00000059439	sars1 (ENSCARG00000059512)	ENSCARG00000059588	fam50a (ENSCARG00000059622)	tmed4 (ENSCARG00000059857)	plpbp (ENSCARG00000059939)	SNRPG (ENSCARG00000060020)	COQ10A (ENSCARG00000060050)	cs (ENSCARG00000060087)	ENSCARG00000060338	racgap1 (ENSCARG00000060367)	ENSCARG00000060624	bin2a (ENSCARG00000060667)
Goldfish	MODERN SPECIES	2135																fam3a (ENSCARG00000062836) ##22	ENSCARG00000062868
Cyprininae_a	ANCESTRAL SPECIES	489									ENSGT00940000158631.a	ENSGT00940000158981.d	ENSGT00940000153668.A.k	ENSGT00940000159698.a	ENSGT00950000182824.a.b.b.c.f.a	ENSGT01050000244882.b.c.b.a.a.a	ENSGT00950000182989.D.a.a.a.a	ENSGT00950000183004.a.a.a.b.b ##22	ENSGT00940000160145.b.cb.b.a.b	ENSGT00940000160145.b.cb.b.b	ENSGT00940000160145.b.cb.b.a.a	ENSGT00940000156107.e.a.h	ENSGT00940000164713.a	ENSGT00940000156561.a.a.d	ENSGT00940000159962.h	ENSGT00940000157899.a.b.b.b
Common carp reference	MODERN SPECIES	11	ENSCCRG00000058011	kansl2 (ENSCCRG00000036318)	ENSCCRG00000036327	ctdsp2 (ENSCCRG00000076751)	ENSCCRG00000018615	sdf4 (ENSCCRG00000070968)	c1qtnf12 (ENSCCRG00000079534)	olfml3a (ENSCCRG00000018607)	klhl21 (ENSCCRG00000018619)	ENSCCRG00000019160	NOL9 (ENSCCRG00000019143)	casp9 (ENSCCRG00000019120)	arhgap4a (ENSCCRG00000019108)	ENSCCRG00000019019	idh3g (ENSCCRG00000064047)	fam3a (ENSCCRG00000019003) ##22	ENSCCRG00000018996	ENSCCRG00000071664	erbb3b (ENSCCRG00000018982)	pa2g4b (ENSCCRG00000045277)	ENSCCRG00000045295	fmnl3 (ENSCCRG00000051392)	ENSCCRG00000062902	ENSCCRG00000056278	rbms2b (ENSCCRG00000067090)	ENSCCRG00000051452	ENSCCRG00000051457	hnf4a (ENSCCRG00000080027)	ttpal (ENSCCRG00000074309)	pkig (ENSCCRG00000056848)	ada (ENSCCRG00000011844)
Golden-line barbel	MODERN SPECIES	176	TMEM240 (ENSSGRG00000014245)	ENSSGRG00000014244	kansl2 (ENSSGRG00000014241)	ENSSGRG00000014240	ctdsp2 (ENSSGRG00000014239)	sdf4 (ENSSGRG00000014238)	c1qtnf12 (ENSSGRG00000014237)	SYT6 (ENSSGRG00000014236)	olfml3a (ENSSGRG00000014235)	klhl21 (ENSSGRG00000014233)	ZBTB48 (ENSSGRG00000014232)	NOL9 (ENSSGRG00000014231)	casp9 (ENSSGRG00000014193)	arhgap4a (ENSSGRG00000014190)	idh3g (ENSSGRG00000013256)	fam3a (ENSSGRG00000013242) ##22	ENSSGRG00000013240	erbb3b (ENSSGRG00000013034)	ESYT1 (ENSSGRG00000012634)	fmnl3 (ENSSGRG00000011346)	LRP1 (ENSSGRG00000008433)
Zebrafish	MODERN SPECIES	15	kansl2 (ENSDARG00000056318)	ENSDARG00000079148	ctdsp2 (ENSDARG00000036102)	sdf4 (ENSDARG00000070682)	c1qtnf12 (ENSDARG00000070681)	olfml3a (ENSDARG00000061852)	SYT6 (ENSDARG00000076730)	klhl21 (ENSDARG00000039255)	ZBTB48 (ENSDARG00000039263)	NOL9 (ENSDARG00000077751)	casp9 (ENSDARG00000004325)	arhgap4a (ENSDARG00000039265)	ENSDARG00000007436	ENSDARG00000077589	idh3g (ENSDARG00000023648)	fam3a (ENSDARG00000070675) ##22	ENSDARG00000021611	erbb3b (ENSDARG00000036993)	pa2g4b (ENSDARG00000070657)	ENSDARG00000092807	ENSDARG00000034714	fmnl3 (ENSDARG00000004372)	LRP1 (ENSDARG00000029146)	rbms2b (ENSDARG00000056150)	ENSDARG00000078574	fitm2 (ENSDARG00000034568)	R3HDML (ENSDARG00000030650)	hnf4a (ENSDARG00000021494)	ENSDARG00000111751	ttpal (ENSDARG00000070644)	pkig (ENSDARG00000086471)
Euteleosteomorpha	ANCESTRAL SPECIES	2	ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Acanthomorphata	ANCESTRAL SPECIES	20	ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT01030000234570.d.b.a.a.h	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000177181	ENSGT00940000164002.k.a
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Percomorphaceae	ANCESTRAL SPECIES	7	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Tiger tail seahorse	MODERN SPECIES	261	ENSHCOG00000008248	ahr1b (ENSHCOG00000008459)	ENSHCOG00000008499	mfsd6a (ENSHCOG00000008521)	nab1a (ENSHCOG00000008544)	glsa (ENSHCOG00000008581)	stat1a (ENSHCOG00000008635)	mstna (ENSHCOG00000010987)	ENSHCOG00000011134	sumo1 (ENSHCOG00000011147)	MAP3K2 (ENSHCOG00000011184)	ENSHCOG00000011195	ENSHCOG00000011233	AVPR2 (ENSHCOG00000011651)	idh3g (ENSHCOG00000011694)	fam3a (ENSHCOG00000011707) ##22	ENSHCOG00000011731	phf8 (ENSHCOG00000011831)	ENSHCOG00000011889	ENSHCOG00000011911	l1cama (ENSHCOG00000012044)
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Tetraodontidae	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00940000177181	ENSGT00940000164002.k.a
Fugu	MODERN SPECIES	15	ptges3a (ENSTRUG00000015676)	dtx3 (ENSTRUG00000015669)	ENSTRUG00000025546	rnd1b (ENSTRUG00000028801)	CACNB3 (ENSTRUG00000000500)	ADCY6 (ENSTRUG00000015455)	ENSTRUG00000033127	CACNB3 (ENSTRUG00000015617)	galnt6 (ENSTRUG00000015420)	G6PD (ENSTRUG00000015385)	zgc:158263 (ENSTRUG00000023337)	naa10 (ENSTRUG00000015343)	arhgap4a (ENSTRUG00000015312)	ssr4 (ENSTRUG00000015280)	idh3g (ENSTRUG00000015080)	fam3a (ENSTRUG00000015047) ##22	ENSTRUG00000020630	phf8 (ENSTRUG00000014867)	HUWE1 (ENSTRUG00000014610)	l1cama (ENSTRUG00000014373)	ribc1 (ENSTRUG00000014325)	smc1al (ENSTRUG00000014137)	cacna1sb (ENSTRUG00000029231)	tmem9 (ENSTRUG00000013495)	C1QL4 (ENSTRUG00000013483)	zgc:153867 (ENSTRUG00000024805)	neurod4 (ENSTRUG00000013273)	birc5b (ENSTRUG00000023078)	ZNF385A (ENSTRUG00000013160)	ENSTRUG00000023133	c1galt1la (ENSTRUG00000013143)
Tetraodon	MODERN SPECIES	24	stat6 (ENSTNIG00000015103)	mipa (ENSTNIG00000015102)	ptges3a (ENSTNIG00000015101)	dtx3 (ENSTNIG00000015100)	rnd1b (ENSTNIG00000015099)	CACNB3 (ENSTNIG00000015098)	ADCY6 (ENSTNIG00000015097)	galnt6 (ENSTNIG00000015096)	G6PD (ENSTNIG00000015095)	zgc:158263 (ENSTNIG00000015094)	naa10 (ENSTNIG00000015093)	arhgap4a (ENSTNIG00000015092)	ssr4 (ENSTNIG00000015091)	AVPR2 (ENSTNIG00000015090)	idh3g (ENSTNIG00000015089)	fam3a (ENSTNIG00000015088) ##22	WNK3 (ENSTNIG00000015087)	phf8 (ENSTNIG00000015086)	ENSTNIG00000001095	HUWE1 (ENSTNIG00000015085)	l1cama (ENSTNIG00000015084)	ENSTNIG00000000352	smc1al (ENSTNIG00000015083)	cacna1sb (ENSTNIG00000015082)	tmem9 (ENSTNIG00000015081)	C1QL4 (ENSTNIG00000015080)	birc5b (ENSTNIG00000015079)	ZNF385A (ENSTNIG00000015078)	c1galt1la (ENSTNIG00000015077)	b4galnt1a (ENSTNIG00000015076)	ENSTNIG00000015075
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526.a	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Ballan wrasse	MODERN SPECIES	832											naa10 (ENSLBEG00000014504)	arhgap4a (ENSLBEG00000014536)	ssr4 (ENSLBEG00000014623)	AVPR2 (ENSLBEG00000014893)	idh3g (ENSLBEG00000014930)	fam3a (ENSLBEG00000015077) ##22	ENSLBEG00000015132	ENSLBEG00000015179	phf8 (ENSLBEG00000015226)
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526.a	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526.a	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526.a	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Pike perch	MODERN SPECIES	111	stat6 (ENSSLUG00000014360)	mipa (ENSSLUG00000014342)	ptges3a (ENSSLUG00000014339)	dtx3 (ENSSLUG00000014325)	ENSSLUG00000014318	rnd1b (ENSSLUG00000014310)	CACNB3 (ENSSLUG00000014290)	ADCY6 (ENSSLUG00000012939)	galnt6 (ENSSLUG00000012809)	G6PD (ENSSLUG00000012638)	zgc:158263 (ENSSLUG00000012544)	naa10 (ENSSLUG00000012513)	ssr4 (ENSSLUG00000012492)	AVPR2 (ENSSLUG00000012485)	idh3g (ENSSLUG00000011296)	fam3a (ENSSLUG00000011205) ##22	ENSSLUG00000011195	phf8 (ENSSLUG00000011161)	l1cama (ENSSLUG00000008276)	ribc1 (ENSSLUG00000008154)	smc1al (ENSSLUG00000002937)	cacna1sb (ENSSLUG00000002284)	tmem9 (ENSSLUG00000002152)	C1QL4 (ENSSLUG00000002147)	zgc:153867 (ENSSLUG00000002014)	neurod4 (ENSSLUG00000001989)	birc5b (ENSSLUG00000001985)	ZNF385A (ENSSLUG00000001974)	ENSSLUG00000001964	ENSSLUG00000001958	tac3a (ENSSLUG00000001947)
Channel bull blenny	MODERN SPECIES	21	mipa (ENSCGOG00000016516)	ptges3a (ENSCGOG00000016513)	dtx3 (ENSCGOG00000016509)	ENSCGOG00000016506	rnd1b (ENSCGOG00000016494)	CACNB3 (ENSCGOG00000016326)	ADCY6 (ENSCGOG00000014938)	galnt6 (ENSCGOG00000014885)	G6PD (ENSCGOG00000014249)	zgc:158263 (ENSCGOG00000014220)	naa10 (ENSCGOG00000013995)	arhgap4a (ENSCGOG00000013984)	ssr4 (ENSCGOG00000013970)	AVPR2 (ENSCGOG00000013937)	idh3g (ENSCGOG00000013894)	fam3a (ENSCGOG00000013885) ##22	ENSCGOG00000013877	phf8 (ENSCGOG00000013396)	HUWE1 (ENSCGOG00000013257)	l1cama (ENSCGOG00000012422)	ribc1 (ENSCGOG00000012397)	smc1al (ENSCGOG00000010166)	cacna1sb (ENSCGOG00000009136)	tmem9 (ENSCGOG00000009106)	C1QL4 (ENSCGOG00000009101)	zgc:153867 (ENSCGOG00000009079)	ENSCGOG00000009074	neurod4 (ENSCGOG00000009070)	ENSCGOG00000009067	ZNF385A (ENSCGOG00000009053)	tac3a (ENSCGOG00000009035)
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526.a	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Lumpfish	MODERN SPECIES	22	mipa (ENSCLMG00005021961)	ptges3a (ENSCLMG00005021963)	dtx3 (ENSCLMG00005021965)	ENSCLMG00005021966	rnd1b (ENSCLMG00005021967)	CACNB3 (ENSCLMG00005021969)	ADCY6 (ENSCLMG00005022096)	galnt6 (ENSCLMG00005022283)	G6PD (ENSCLMG00005022284)	zgc:158263 (ENSCLMG00005022290)	naa10 (ENSCLMG00005022291)	arhgap4a (ENSCLMG00005022292)	ssr4 (ENSCLMG00005002887)	AVPR2 (ENSCLMG00005002933)	idh3g (ENSCLMG00005003051)	fam3a (ENSCLMG00005003552) ##22	ENSCLMG00005003556	ENSCLMG00005003559	ENSCLMG00005003561	phf8 (ENSCLMG00005003573)	HUWE1 (ENSCLMG00005003600)	l1cama (ENSCLMG00005005065)	ribc1 (ENSCLMG00005005073)	smc1al (ENSCLMG00005005092)	cacna1sb (ENSCLMG00005005216)	tmem9 (ENSCLMG00005006202)	C1QL4 (ENSCLMG00005006207)	zgc:153867 (ENSCLMG00005006210)	birc5b (ENSCLMG00005006248)	ZNF385A (ENSCLMG00005006295)	tac3a (ENSCLMG00005006346)
Stickleback	MODERN SPECIES	11	mipa (ENSGACG00000008484)	ptges3a (ENSGACG00000008508)	dtx3 (ENSGACG00000008546)	rnd1b (ENSGACG00000008549)	CACNB3 (ENSGACG00000008568)	ADCY6 (ENSGACG00000008575)	galnt6 (ENSGACG00000008590)	G6PD (ENSGACG00000008614)	zgc:158263 (ENSGACG00000008620)	naa10 (ENSGACG00000008630)	arhgap4a (ENSGACG00000008645)	ENSGACG00000008657	ssr4 (ENSGACG00000008662)	AVPR2 (ENSGACG00000008681)	idh3g (ENSGACG00000008709)	fam3a (ENSGACG00000008732) ##22	WNK3 (ENSGACG00000008755)	phf8 (ENSGACG00000008770)	HUWE1 (ENSGACG00000008789)	l1cama (ENSGACG00000008823)	ribc1 (ENSGACG00000008846)	smc1al (ENSGACG00000008848)	cacna1sb (ENSGACG00000008900)	tmem9 (ENSGACG00000008927)	C1QL4 (ENSGACG00000008938)	zgc:153867 (ENSGACG00000008944)	neurod4 (ENSGACG00000008952)	birc5b (ENSGACG00000008954)	ZNF385A (ENSGACG00000008964)	c1galt1la (ENSGACG00000008969)	b4galnt1a (ENSGACG00000008972)
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	15	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Large yellow croaker	MODERN SPECIES	487	mipa (ENSLCRG00005008070)	ptges3a (ENSLCRG00005008066)	dtx3 (ENSLCRG00005008064)	ENSLCRG00005008062	rnd1b (ENSLCRG00005008060)	CACNB3 (ENSLCRG00005007983)	ADCY6 (ENSLCRG00005007891)	galnt6 (ENSLCRG00005007866)	G6PD (ENSLCRG00005007159)	zgc:158263 (ENSLCRG00005007155)	naa10 (ENSLCRG00005007137)	arhgap4a (ENSLCRG00005007135)	ssr4 (ENSLCRG00005007134)	AVPR2 (ENSLCRG00005007133)	idh3g (ENSLCRG00005007128)	fam3a (ENSLCRG00005007122) ##22	ENSLCRG00005007118	phf8 (ENSLCRG00005007102)	HUWE1 (ENSLCRG00005007025)	l1cama (ENSLCRG00005006668)	ribc1 (ENSLCRG00005006661)	smc1al (ENSLCRG00005006657)	cacna1sb (ENSLCRG00005002472)	tmem9 (ENSLCRG00005002300)	C1QL4 (ENSLCRG00005002298)	zgc:153867 (ENSLCRG00005002248)	neurod4 (ENSLCRG00005002244)	birc5b (ENSLCRG00005002241)	ZNF385A (ENSLCRG00005002232)	tac3a (ENSLCRG00005002228)	c1galt1la (ENSLCRG00005002225)
European seabass	MODERN SPECIES	14	stat6 (ENSDLAG00005023192)	ENSDLAG00005035116	mipa (ENSDLAG00005025616)	ptges3a (ENSDLAG00005032503)	dtx3 (ENSDLAG00005032563)	ENSDLAG00005031938	rnd1b (ENSDLAG00005023154)	ENSDLAG00005023112	ENSDLAG00005022942	ENSDLAG00005022824	zgc:158263 (ENSDLAG00005022811)	NAA10 (ENSDLAG00005022794)	ARHGAP4 (ENSDLAG00005030799)	ENSDLAG00005022773	AVPR2 (ENSDLAG00005022761)	fam3a (ENSDLAG00005022400) ##22	ENSDLAG00005022418	ENSDLAG00005033753	ENSDLAG00005022327	HUWE1 (ENSDLAG00005021511)	ENSDLAG00005021041	ribc1 (ENSDLAG00005020997)	ENSDLAG00005018845	ENSDLAG00005014917	ENSDLAG00005034445	ENSDLAG00005035107	zgc:153867 (ENSDLAG00005014609)	neurod4 (ENSDLAG00005030346)	birc5b (ENSDLAG00005014595)	ENSDLAG00005014554	tac3a (ENSDLAG00005014515)
Gilthead seabream	MODERN SPECIES	21	mipa (ENSSAUG00010022169)	ptges3a (ENSSAUG00010022168)	dtx3 (ENSSAUG00010022167)	ENSSAUG00010022166	rnd1b (ENSSAUG00010022163)	CACNB3 (ENSSAUG00010022151)	ADCY6 (ENSSAUG00010022037)	galnt6 (ENSSAUG00010022026)	G6PD (ENSSAUG00010022016)	zgc:158263 (ENSSAUG00010022010)	naa10 (ENSSAUG00010022003)	arhgap4a (ENSSAUG00010021999)	ssr4 (ENSSAUG00010021995)	AVPR2 (ENSSAUG00010021979)	idh3g (ENSSAUG00010021899)	fam3a (ENSSAUG00010021897) ##22	ENSSAUG00010021896	phf8 (ENSSAUG00010021826)	l1cama (ENSSAUG00010020181)	ribc1 (ENSSAUG00010020173)	smc1al (ENSSAUG00010020123)	cacna1sb (ENSSAUG00010018860)	tmem9 (ENSSAUG00010018850)	C1QL4 (ENSSAUG00010018848)	zgc:153867 (ENSSAUG00010018840)	neurod4 (ENSSAUG00010018838)	birc5b (ENSSAUG00010018835)	ZNF385A (ENSSAUG00010018825)	tac3a (ENSSAUG00010018819)	c1galt1la (ENSSAUG00010018817)	b4galnt1a (ENSSAUG00010018811)
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Climbing perch	MODERN SPECIES	20	stat6 (ENSATEG00000020969)	mipa (ENSATEG00000021018)	ptges3a (ENSATEG00000021136)	dtx3 (ENSATEG00000021146)	ENSATEG00000026241	rnd1b (ENSATEG00000025823)	ENSATEG00000021180	ENSATEG00000021204	galnt6 (ENSATEG00000021315)	ENSATEG00000021326	zgc:158263 (ENSATEG00000021345)	arhgap4a (ENSATEG00000021383)	ENSATEG00000021404	ENSATEG00000021411	idh3g (ENSATEG00000021436)	fam3a (ENSATEG00000021448) ##22	WNK3 (ENSATEG00000021469)	ENSATEG00000021514	HUWE1 (ENSATEG00000021573)	ENSATEG00000021665	ribc1 (ENSATEG00000021740)	ENSATEG00000021761	ENSATEG00000021840	ENSATEG00000021882	ENSATEG00000021894	zgc:153867 (ENSATEG00000021905)	neurod4 (ENSATEG00000021935)	birc5b (ENSATEG00000021946)	ENSATEG00000021954	tac3a (ENSATEG00000021993)	c1galt1la (ENSATEG00000021975)
Siamese fighting fish	MODERN SPECIES	18	stat6 (ENSBSLG00000000609)	mipa (ENSBSLG00000000576)	ptges3a (ENSBSLG00000000557)	dtx3 (ENSBSLG00000000536)	ENSBSLG00000000515	rnd1b (ENSBSLG00000000494)	ADCY6 (ENSBSLG00000021358)	galnt6 (ENSBSLG00000021226)	G6PD (ENSBSLG00000021097)	zgc:158263 (ENSBSLG00000021001)	naa10 (ENSBSLG00000020304)	arhgap4a (ENSBSLG00000020301)	ssr4 (ENSBSLG00000020276)	AVPR2 (ENSBSLG00000020269)	idh3g (ENSBSLG00000019900)	fam3a (ENSBSLG00000019834) ##22	WNK3 (ENSBSLG00000019783)	phf8 (ENSBSLG00000019443)	HUWE1 (ENSBSLG00000019318)	l1cama (ENSBSLG00000019188)	ribc1 (ENSBSLG00000019162)	smc1al (ENSBSLG00000018947)	tmem9 (ENSBSLG00000018145)	C1QL4 (ENSBSLG00000018142)	zgc:153867 (ENSBSLG00000018110)	neurod4 (ENSBSLG00000018099)	birc5b (ENSBSLG00000018090)	ZNF385A (ENSBSLG00000018085)	ZNF385A (ENSBSLG00000018060)	tac3a (ENSBSLG00000018033)	c1galt1la (ENSBSLG00000018029)
Zig-zag eel	MODERN SPECIES	21	ptges3a (ENSMAMG00000004005)	dtx3 (ENSMAMG00000004032)	ENSMAMG00000028514	ENSMAMG00000026072	rnd1b (ENSMAMG00000004070)	ENSMAMG00000004086	ENSMAMG00000004146	galnt6 (ENSMAMG00000004300)	ENSMAMG00000024746	zgc:158263 (ENSMAMG00000004352)	NAA10 (ENSMAMG00000004390)	arhgap4a (ENSMAMG00000004425)	ENSMAMG00000004545	AVPR2 (ENSMAMG00000005420)	idh3g (ENSMAMG00000005461)	fam3a (ENSMAMG00000005488) ##22	ENSMAMG00000005507	ENSMAMG00000005572	HUWE1 (ENSMAMG00000005766)	ENSMAMG00000005964	ribc1 (ENSMAMG00000006002)	ENSMAMG00000006012	ENSMAMG00000006070	ENSMAMG00000006098	ENSMAMG00000006123	zgc:153867 (ENSMAMG00000006134)	birc5b (ENSMAMG00000006191)	ENSMAMG00000006256	tac3a (ENSMAMG00000006319)	c1galt1la (ENSMAMG00000006293)	b4galnt1a (ENSMAMG00000006347)
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Seriola	ANCESTRAL SPECIES	8	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Greater amberjack	MODERN SPECIES	23	ENSSDUG00000011251	rnd1b (ENSSDUG00000011263)	CACNB3 (ENSSDUG00000011285)	ADCY6 (ENSSDUG00000011320)	galnt6 (ENSSDUG00000011358)	G6PD (ENSSDUG00000011387)	galnt6 (ENSSDUG00000011446)	ENSSDUG00000011458	G6PD (ENSSDUG00000011472)	zgc:158263 (ENSSDUG00000011498)	naa10 (ENSSDUG00000011526)	arhgap4a (ENSSDUG00000011553)	ssr4 (ENSSDUG00000011578)	AVPR2 (ENSSDUG00000011606)	idh3g (ENSSDUG00000011616)	fam3a (ENSSDUG00000011643) ##22	ENSSDUG00000011683	ENSSDUG00000011690	phf8 (ENSSDUG00000011716)	HUWE1 (ENSSDUG00000011761)	l1cama (ENSSDUG00000011951)	ribc1 (ENSSDUG00000012024)	smc1al (ENSSDUG00000012044)	cacna1sb (ENSSDUG00000012119)	tmem9 (ENSSDUG00000012195)	C1QL4 (ENSSDUG00000012215)	zgc:153867 (ENSSDUG00000012228)	neurod4 (ENSSDUG00000012267)	birc5b (ENSSDUG00000012272)	ZNF385A (ENSSDUG00000012278)	c1galt1la (ENSSDUG00000012311)
Yellowtail amberjack	MODERN SPECIES	3155	mipa (ENSSLDG00000005389)	ptges3a (ENSSLDG00000005403)	dtx3 (ENSSLDG00000005439)	ENSSLDG00000005449	rnd1b (ENSSLDG00000005460)	CACNB3 (ENSSLDG00000006055)	ADCY6 (ENSSLDG00000008229)	galnt6 (ENSSLDG00000008345)	G6PD (ENSSLDG00000008374)	zgc:158263 (ENSSLDG00000008428)	naa10 (ENSSLDG00000008517)	arhgap4a (ENSSLDG00000008556)	ssr4 (ENSSLDG00000008589)	AVPR2 (ENSSLDG00000008621)	idh3g (ENSSLDG00000008676)	fam3a (ENSSLDG00000008712) ##22	ENSSLDG00000008760	phf8 (ENSSLDG00000008836)	HUWE1 (ENSSLDG00000008966)	l1cama (ENSSLDG00000009298)	ribc1 (ENSSLDG00000009524)	smc1al (ENSSLDG00000009559)
Barramundi perch	MODERN SPECIES	102	mipa (ENSLCAG00010018348)	ptges3a (ENSLCAG00010018353)	dtx3 (ENSLCAG00010018357)	ENSLCAG00010018359	rnd1b (ENSLCAG00010018360)	CACNB3 (ENSLCAG00010018362)	ADCY6 (ENSLCAG00010018483)	galnt6 (ENSLCAG00010019052)	G6PD (ENSLCAG00010019073)	zgc:158263 (ENSLCAG00010019112)	naa10 (ENSLCAG00010019126)	arhgap4a (ENSLCAG00010019139)	ssr4 (ENSLCAG00010019155)	AVPR2 (ENSLCAG00010019162)	idh3g (ENSLCAG00010019172)	fam3a (ENSLCAG00010019177) ##22	ENSLCAG00010019187	phf8 (ENSLCAG00010019206)	HUWE1 (ENSLCAG00010019441)	l1cama (ENSLCAG00010020538)	ribc1 (ENSLCAG00010020571)	smc1al (ENSLCAG00010020791)	cacna1sb (ENSLCAG00010021549)	tmem9 (ENSLCAG00010021845)	C1QL4 (ENSLCAG00010021850)	zgc:153867 (ENSLCAG00010021883)	neurod4 (ENSLCAG00010021998)	birc5b (ENSLCAG00010022000)	ZNF385A (ENSLCAG00010022008)	tac3a (ENSLCAG00010022021)	c1galt1la (ENSLCAG00010022027)
Pleuronectoidei	ANCESTRAL SPECIES	14	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a	ENSGT00390000006679.a.f
Tongue sole	MODERN SPECIES	1	ENSCSEG00000001235	ENSCSEG00000001240	fam50a (ENSCSEG00000001241)	ptges3a (ENSCSEG00000001251)	dtx3 (ENSCSEG00000001255)	rnd1b (ENSCSEG00000001268)	CACNB3 (ENSCSEG00000001270)	ADCY6 (ENSCSEG00000001277)	galnt6 (ENSCSEG00000001291)	zgc:158263 (ENSCSEG00000001313)	naa10 (ENSCSEG00000001327)	arhgap4a (ENSCSEG00000001389)	ssr4 (ENSCSEG00000001399)	AVPR2 (ENSCSEG00000001404)	idh3g (ENSCSEG00000001409)	fam3a (ENSCSEG00000001428) ##22	ENSCSEG00000001434	ENSCSEG00000001437	phf8 (ENSCSEG00000001447)	HUWE1 (ENSCSEG00000001466)	l1cama (ENSCSEG00000001510)	ribc1 (ENSCSEG00000001548)	smc1al (ENSCSEG00000001552)	lamtor5 (ENSCSEG00000001567)	prok1 (ENSCSEG00000001581)	ZNF335 (ENSCSEG00000001591)	mmp9 (ENSCSEG00000001640)	adora1b (ENSCSEG00000001717)	dclre1b (ENSCSEG00000001718)	cpne5a (ENSCSEG00000001725)	lhfpl5b (ENSCSEG00000001747)
Turbot	MODERN SPECIES	2	mipa (ENSSMAG00000027989)	ptges3a (ENSSMAG00000001022)	dtx3 (ENSSMAG00000001056)	ENSSMAG00000001061	rnd1b (ENSSMAG00000001076)	ENSSMAG00000001088	ENSSMAG00000001128	galnt6 (ENSSMAG00000001232)	ENSSMAG00000001281	zgc:158263 (ENSSMAG00000001327)	NAA10 (ENSSMAG00000001400)	arhgap4a (ENSSMAG00000001421)	ENSSMAG00000001448	AVPR2 (ENSSMAG00000001459)	idh3g (ENSSMAG00000001478)	fam3a (ENSSMAG00000001510) ##22	ENSSMAG00000024916	ENSSMAG00000001536	ENSSMAG00000022001	ENSSMAG00000001577	HUWE1 (ENSSMAG00000001712)	ENSSMAG00000001904	ribc1 (ENSSMAG00000002005)	ENSSMAG00000002013	ENSSMAG00000002083	ENSSMAG00000002247	ENSSMAG00000002281	zgc:153867 (ENSSMAG00000002379)	neurod4 (ENSSMAG00000002363)	ENSSMAG00000036508	ENSSMAG00000002448
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Oryzias	ANCESTRAL SPECIES	4	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.c.a	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.c.a	ENSGT00940000158289.a.b.b.c.b	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335
Indian medaka	MODERN SPECIES	23	ptges3a (ENSOMEG00000019283)	dtx3 (ENSOMEG00000019240)	ENSOMEG00000019225	rnd1b (ENSOMEG00000019214)	CACNB3 (ENSOMEG00000019194)	ENSOMEG00000019177	ADCY6 (ENSOMEG00000019144)	galnt6 (ENSOMEG00000019030)	G6PD (ENSOMEG00000018995)	zgc:158263 (ENSOMEG00000018964)	naa10 (ENSOMEG00000018920)	arhgap4a (ENSOMEG00000018883)	ssr4 (ENSOMEG00000018823)	AVPR2 (ENSOMEG00000000485)	idh3g (ENSOMEG00000018769)	fam3a (ENSOMEG00000018725) ##22	WNK3 (ENSOMEG00000018698)	phf8 (ENSOMEG00000018644)	ENSOMEG00000018538	ENSOMEG00000018496	l1cama (ENSOMEG00000018404)	ribc1 (ENSOMEG00000018085)	smc1al (ENSOMEG00000018047)	ENSOMEG00000017972	ENSOMEG00000017961	ENSOMEG00000017945	tmem9 (ENSOMEG00000017927)	C1QL4 (ENSOMEG00000017901)	zgc:153867 (ENSOMEG00000017882)	neurod4 (ENSOMEG00000017852)	birc5b (ENSOMEG00000017843)
Javanese ricefish	MODERN SPECIES	21	mipa (ENSOJAG00000021911)	ptges3a (ENSOJAG00000021924)	dtx3 (ENSOJAG00000021933)	ENSOJAG00000021945	rnd1b (ENSOJAG00000021953)	CACNB3 (ENSOJAG00000021999)	ADCY6 (ENSOJAG00000022246)	galnt6 (ENSOJAG00000022665)	G6PD (ENSOJAG00000022675)	zgc:158263 (ENSOJAG00000022696)	naa10 (ENSOJAG00000022703)	arhgap4a (ENSOJAG00000022713)	ssr4 (ENSOJAG00000022722)	AVPR2 (ENSOJAG00000022751)	idh3g (ENSOJAG00000022809)	fam3a (ENSOJAG00000022923) ##22	ENSOJAG00000022936	phf8 (ENSOJAG00000022991)	ENSOJAG00000023557	ribc1 (ENSOJAG00000023564)	smc1al (ENSOJAG00000023577)	tmem9 (ENSOJAG00000023603)	C1QL4 (ENSOJAG00000023605)	zgc:153867 (ENSOJAG00000005725)	neurod4 (ENSOJAG00000006057)	birc5b (ENSOJAG00000006069)	ZNF385A (ENSOJAG00000006085)	tac3a (ENSOJAG00000006182)	c1galt1la (ENSOJAG00000006203)	b4galnt1a (ENSOJAG00000006217)	ENSOJAG00000006287
Oryzias_a	ANCESTRAL SPECIES		ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.c.a	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Chinese medaka	MODERN SPECIES	1092	FIGNL2 (ENSOSIG00000010919)	stat6 (ENSOSIG00000010899)	mipa (ENSOSIG00000010897)	ptges3a (ENSOSIG00000010896)	dtx3 (ENSOSIG00000010895)	ENSOSIG00000010894	rnd1b (ENSOSIG00000010892)	CACNB3 (ENSOSIG00000010747)	ADCY6 (ENSOSIG00000007926)	galnt6 (ENSOSIG00000007878)	G6PD (ENSOSIG00000007683)	zgc:158263 (ENSOSIG00000007674)	ssr4 (ENSOSIG00000007519)	AVPR2 (ENSOSIG00000007500)	idh3g (ENSOSIG00000006803)	fam3a (ENSOSIG00000006800) ##22	ENSOSIG00000006798	phf8 (ENSOSIG00000005986)	l1cama (ENSOSIG00000020268)	ENSOSIG00000020230	smc1al (ENSOSIG00000018777)	tmem9 (ENSOSIG00000018648)	C1QL4 (ENSOSIG00000018647)	zgc:153867 (ENSOSIG00000018540)	neurod4 (ENSOSIG00000018528)	birc5b (ENSOSIG00000018525)	ZNF385A (ENSOSIG00000018521)	tac3a (ENSOSIG00000018512)	c1galt1la (ENSOSIG00000018504)	b4galnt1a (ENSOSIG00000018500)	ENSOSIG00000018488
Japanese Medaka HdrR	MODERN SPECIES	21	mipa (ENSORLG00000020190)	ptges3a (ENSORLG00000030045)	dtx3 (ENSORLG00000024916)	ENSORLG00000026267	rnd1b (ENSORLG00000023113)	ENSORLG00000006945	ENSORLG00000006969	galnt6 (ENSORLG00000006993)	ENSORLG00000007024	zgc:158263 (ENSORLG00000007039)	naa10 (ENSORLG00000007057)	arhgap4a (ENSORLG00000023003)	ssr4 (ENSORLG00000007070)	avpr2 (ENSORLG00000007088)	ENSORLG00000028587	fam3a (ENSORLG00000027045) ##22	idh3g (ENSORLG00000007106)	WNK3 (ENSORLG00000007137)	phf8 (ENSORLG00000007172)	HUWE1 (ENSORLG00000007276)	l1cama (ENSORLG00000007291)	ribc1 (ENSORLG00000007297)	smc1al (ENSORLG00000007360)	ENSORLG00000030075	cacna1sb (ENSORLG00000007431)	tmem9 (ENSORLG00000029544)	ENSORLG00000007449	zgc:153867 (ENSORLG00000007460)	neurod4 (ENSORLG00000007467)	birc5b (ENSORLG00000027336)	ENSORLG00000007485
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000177181
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00940000177181	ENSGT00940000164002.k.a
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00940000177181	ENSGT00940000164002.k.a
Poecilia	DUPLICATION
Poecilia	ANCESTRAL SPECIES	14	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b.c ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00940000177181	ENSGT00940000164002.k.a
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	45	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b.c.b ##22	ENSGT00950000183004.a.a.a.b.c.a ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00940000177181	ENSGT00940000164002.k.a
Amazon molly	MODERN SPECIES	331	ENSPFOG00000012339	rnd1b (ENSPFOG00000012338)	CACNB3 (ENSPFOG00000023304)	ADCY6 (ENSPFOG00000012088)	G6PD (ENSPFOG00000011931)	ADCY6 (ENSPFOG00000011466)	galnt6 (ENSPFOG00000011425)	G6PD (ENSPFOG00000011236)	zgc:158263 (ENSPFOG00000011077)	naa10 (ENSPFOG00000011021)	arhgap4a (ENSPFOG00000010862)	ssr4 (ENSPFOG00000010858)	AVPR2 (ENSPFOG00000010816)	idh3g (ENSPFOG00000010697)	fam3a (ENSPFOG00000010674) ##22	fam3a (ENSPFOG00000010563) ##22	WNK3 (ENSPFOG00000010465)	phf8 (ENSPFOG00000010366)	HUWE1 (ENSPFOG00000010355)	l1cama (ENSPFOG00000010077)	ribc1 (ENSPFOG00000009982)	smc1al (ENSPFOG00000009812)	cacna1sb (ENSPFOG00000009012)	tmem9 (ENSPFOG00000008968)	C1QL4 (ENSPFOG00000008945)	zgc:153867 (ENSPFOG00000008829)	neurod4 (ENSPFOG00000008824)	birc5b (ENSPFOG00000008790)	ZNF385A (ENSPFOG00000008692)	c1galt1la (ENSPFOG00000008682)	b4galnt1a (ENSPFOG00000008471)
Sailfin molly	MODERN SPECIES	1835																fam3a (ENSPLAG00000010851) ##22	ENSPLAG00000010885	phf8 (ENSPLAG00000010986)	HUWE1 (ENSPLAG00000011180)
NAME_6	ANCESTRAL SPECIES	45	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b.c.b ##22	ENSGT00950000183004.a.a.a.b.c.a ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00940000177181
Amazon molly	MODERN SPECIES	331	dtx3 (ENSPFOG00000012343)	ENSPFOG00000012339	rnd1b (ENSPFOG00000012338)	CACNB3 (ENSPFOG00000023304)	ADCY6 (ENSPFOG00000012088)	G6PD (ENSPFOG00000011931)	ADCY6 (ENSPFOG00000011466)	galnt6 (ENSPFOG00000011425)	G6PD (ENSPFOG00000011236)	zgc:158263 (ENSPFOG00000011077)	naa10 (ENSPFOG00000011021)	arhgap4a (ENSPFOG00000010862)	ssr4 (ENSPFOG00000010858)	AVPR2 (ENSPFOG00000010816)	idh3g (ENSPFOG00000010697)	fam3a (ENSPFOG00000010674) ##22	fam3a (ENSPFOG00000010563) ##22	WNK3 (ENSPFOG00000010465)	phf8 (ENSPFOG00000010366)	HUWE1 (ENSPFOG00000010355)	l1cama (ENSPFOG00000010077)	ribc1 (ENSPFOG00000009982)	smc1al (ENSPFOG00000009812)	cacna1sb (ENSPFOG00000009012)	tmem9 (ENSPFOG00000008968)	C1QL4 (ENSPFOG00000008945)	zgc:153867 (ENSPFOG00000008829)	neurod4 (ENSPFOG00000008824)	birc5b (ENSPFOG00000008790)	ZNF385A (ENSPFOG00000008692)	c1galt1la (ENSPFOG00000008682)
Sailfin molly	MODERN SPECIES	1939									G6PD (ENSPLAG00000009885)	zgc:158263 (ENSPLAG00000009937)	naa10 (ENSPLAG00000009981)	arhgap4a (ENSPLAG00000010027)	ssr4 (ENSPLAG00000010047)	AVPR2 (ENSPLAG00000010064)	idh3g (ENSPLAG00000010075)	fam3a (ENSPLAG00000010106) ##22
Guppy	MODERN SPECIES	459	dtx3 (ENSPREG00000022207)	ENSPREG00000022199	rnd1b (ENSPREG00000022195)	CACNB3 (ENSPREG00000022186)	ENSPREG00000022183	ADCY6 (ENSPREG00000022160)	galnt6 (ENSPREG00000022099)	G6PD (ENSPREG00000022079)	zgc:158263 (ENSPREG00000022068)	naa10 (ENSPREG00000022064)	ENSPREG00000022061	arhgap4a (ENSPREG00000022046)	ssr4 (ENSPREG00000022038)	AVPR2 (ENSPREG00000022030)	idh3g (ENSPREG00000022014)	fam3a (ENSPREG00000021999) ##22	ENSPREG00000021990	phf8 (ENSPREG00000021976)	HUWE1 (ENSPREG00000021868)	l1cama (ENSPREG00000021765)	ribc1 (ENSPREG00000021737)	smc1al (ENSPREG00000021702)	cacna1sb (ENSPREG00000021511)	tmem9 (ENSPREG00000021440)	C1QL4 (ENSPREG00000021433)	zgc:153867 (ENSPREG00000021421)	neurod4 (ENSPREG00000021410)	birc5b (ENSPREG00000021398)	ZNF385A (ENSPREG00000021375)	ENSPREG00000021367	c1galt1la (ENSPREG00000021363)
Poecilia	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b.d ##22
NAME_6	ANCESTRAL SPECIES	50	ENSGT00940000156746.b	ENSGT00940000155542.b	ENSGT00390000006503.a	ENSGT00940000155190.bb.b	ENSGT00950000183104.B.a.a	ENSGT00530000063347.A.a	ENSGT00390000008608	ENSGT00940000160185	ENSGT01030000234573.A.b.a	ENSGT00940000155665.b	ENSGT00520000055591.a.b	ENSGT00390000013340.c	ENSGT00940000154842.a.b.f	ENSGT00510000046975.a	ENSGT00940000164081.a	ENSGT00950000183004.a.a.a.b.d ##22	ENSGT00940000165058.b	ENSGT00940000164769	ENSGT00940000166298	ENSGT00940000157316.e.a	ENSGT00940000158520.e.a	ENSGT00940000157937.b.c	ENSGT00390000006200	ENSGT00940000155117.f.b	ENSGT00390000001114	ENSGT00940000154967.a.b.a.b	ENSGT00940000154615.i.a.a.c.b.b.a	ENSGT00940000154615.i.a.a.c.b.b.b	ENSGT00940000154386	ENSGT00550000075080	ENSGT00940000155152.f.a
Amazon molly	MODERN SPECIES	318	PGM1 (ENSPFOG00000008561)	LEPROT (ENSPFOG00000008551)	ENSPFOG00000024325	ENSPFOG00000008210	FZR1 (ENSPFOG00000008112)	ENSPFOG00000007967	mgst3a (ENSPFOG00000007961)	DYNLT5 (ENSPFOG00000007932)	mier1b (ENSPFOG00000007859)	slc35d1b (ENSPFOG00000007855)	SERBP1 (ENSPFOG00000007788)	hsd17b7 (ENSPFOG00000023149)	ENSPFOG00000007533	ENSPFOG00000007434	rgs5b (ENSPFOG00000007380)	fam3a (ENSPFOG00000007357) ##22	ENSPFOG00000007255	ENSPFOG00000007241	rgs18 (ENSPFOG00000007165)	RGS1 (ENSPFOG00000007127)	rgs13 (ENSPFOG00000007049)	ENSPFOG00000024043	ro60 (ENSPFOG00000006974)	ENSPFOG00000020073	cdc73 (ENSPFOG00000006725)	MFAP4 (ENSPFOG00000023765)	ENSPFOG00000021923	ENSPFOG00000006658	ZBTB41 (ENSPFOG00000006537)	CRB1 (ENSPFOG00000006439)	ENSPFOG00000006382
Sailfin molly	MODERN SPECIES	12				ENSPLAG00000008594	FZR1 (ENSPLAG00000008648)	ENSPLAG00000008702	mgst3a (ENSPLAG00000008721)	DYNLT5 (ENSPLAG00000008736)	mier1b (ENSPLAG00000008742)	slc35d1b (ENSPLAG00000008787)	ENSPLAG00000008801	hsd17b7 (ENSPLAG00000008813)	ENSPLAG00000008855	ENSPLAG00000008888	rgs5b (ENSPLAG00000008894)	fam3a (ENSPLAG00000008905) ##22	ENSPLAG00000008926	ENSPLAG00000008943	rgs18 (ENSPLAG00000008969)	RGS1 (ENSPLAG00000008997)	rgs13 (ENSPLAG00000009006)	ENSPLAG00000009020	ro60 (ENSPLAG00000009027)	ENSPLAG00000009040	cdc73 (ENSPLAG00000009096)	ENSPLAG00000009107	MFAP4 (ENSPLAG00000009136)	ENSPLAG00000009142	ENSPLAG00000000535	ZBTB41 (ENSPLAG00000009179)	ENSPLAG00000009189
Guppy	MODERN SPECIES	447	PGM1 (ENSPREG00000005002)	LEPROT (ENSPREG00000005025)	ENSPREG00000005074	FZR1 (ENSPREG00000005211)	ENSPREG00000005243	mgst3a (ENSPREG00000005308)	DYNLT5 (ENSPREG00000005338)	mier1b (ENSPREG00000005356)	slc35d1b (ENSPREG00000005375)	SERBP1 (ENSPREG00000005399)	hsd17b7 (ENSPREG00000005416)	DDR2 (ENSPREG00000005483)	ENSPREG00000005536	rgs5b (ENSPREG00000005548)	ENSPREG00000005560	fam3a (ENSPREG00000005570) ##22	ENSPREG00000005585	rgs18 (ENSPREG00000005604)	RGS1 (ENSPREG00000005638)	rgs13 (ENSPREG00000005649)	ENSPREG00000005655	ro60 (ENSPREG00000005674)	cdc73 (ENSPREG00000005705)	ENSPREG00000005764	ENSPREG00000005775	ENSPREG00000005796	ENSPREG00000005830	ZBTB41 (ENSPREG00000005852)	ENSPREG00000005895	ENSPREG00000005919	ahsg2 (ENSPREG00000005956)
Platyfish	MODERN SPECIES		ptges3a (ENSXMAG00000010616)	dtx3 (ENSXMAG00000010629)	ENSXMAG00000028926	rnd1b (ENSXMAG00000010632)	CACNB3 (ENSXMAG00000010645)	ENSXMAG00000029132	ADCY6 (ENSXMAG00000010656)	galnt6 (ENSXMAG00000010719)	G6PD (ENSXMAG00000010738)	zgc:158263 (ENSXMAG00000010739)	naa10 (ENSXMAG00000016782)	arhgap4a (ENSXMAG00000010757)	ssr4 (ENSXMAG00000010777)	AVPR2 (ENSXMAG00000010783)	idh3g (ENSXMAG00000010795)	fam3a (ENSXMAG00000025512) ##22	ENSXMAG00000021004	phf8 (ENSXMAG00000010813)	HUWE1 (ENSXMAG00000010828)	l1cama (ENSXMAG00000010902)	ribc1 (ENSXMAG00000010952)	smc1al (ENSXMAG00000010960)	cacna1sb (ENSXMAG00000010988)	tmem9 (ENSXMAG00000011047)	ENSXMAG00000022714	C1QL4 (ENSXMAG00000016054)	zgc:153867 (ENSXMAG00000027869)	neurod4 (ENSXMAG00000027447)	birc5b (ENSXMAG00000023757)	ZNF385A (ENSXMAG00000028272)	ENSXMAG00000022256
NAME_4	ANCESTRAL SPECIES	4	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00940000177181	ENSGT00940000164002.k.a
Sheepshead minnow	MODERN SPECIES	273								galnt6 (ENSCVAG00000022923)	G6PD (ENSCVAG00000022910)	zgc:158263 (ENSCVAG00000022869)	naa10 (ENSCVAG00000022816)	arhgap4a (ENSCVAG00000022798)	ssr4 (ENSCVAG00000022752)	AVPR2 (ENSCVAG00000022742)	idh3g (ENSCVAG00000022700)	fam3a (ENSCVAG00000022668) ##22	ENSCVAG00000022628	phf8 (ENSCVAG00000022608)	HUWE1 (ENSCVAG00000022590)	ENSCVAG00000022466	l1cama (ENSCVAG00000022441)	ribc1 (ENSCVAG00000022406)	smc1al (ENSCVAG00000022389)	cacna1sb (ENSCVAG00000022296)	tmem9 (ENSCVAG00000022208)	C1QL4 (ENSCVAG00000022186)	zgc:153867 (ENSCVAG00000022165)	neurod4 (ENSCVAG00000022137)	birc5b (ENSCVAG00000000571)	ZNF385A (ENSCVAG00000000567)	ENSCVAG00000022093
Aplocheiloidei	ANCESTRAL SPECIES		ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Turquoise killifish	MODERN SPECIES	1624	stat6 (ENSNFUG00015024081)	mipa (ENSNFUG00015024084)	PTGES3A (ENSNFUG00015004816)	DTX3 (ENSNFUG00015004846)	Nfu_g_1_010243 (ENSNFUG00015004853)	RND1L (ENSNFUG00015004862)	CACNB3 (ENSNFUG00015004920)	ADCY6 (ENSNFUG00015005287)	ENSNFUG00015005749	galnt6 (ENSNFUG00015005752)	NAA10 (ENSNFUG00015005801)	arhgap4a (ENSNFUG00015005846)	SSR4 (ENSNFUG00015005857)	AVPR2 (ENSNFUG00015005888)	idh3g (ENSNFUG00015005905)	FAM3A (ENSNFUG00015005930) ##22	ENSNFUG00015005943	PHF8 (ENSNFUG00015005976)	HUWE1 (ENSNFUG00015006087)	l1cama (ENSNFUG00015006292)	ribc1 (ENSNFUG00015006406)	smc1al (ENSNFUG00015006519)	cacna1sb (ENSNFUG00015007284)	tmem9 (ENSNFUG00015007865)	AL954698.2 (ENSNFUG00015007868)	zgc:153867 (ENSNFUG00015007883)	NEUROD4 (ENSNFUG00015007939)	ENSNFUG00015007942	ZNF385A (ENSNFUG00015007954)	ENSNFUG00015007963	ENSNFUG00015007969
Mangrove rivulus	MODERN SPECIES	144	mipa (ENSKMAG00000006281)	ptges3a (ENSKMAG00000006256)	dtx3 (ENSKMAG00000006239)	ENSKMAG00000006227	rnd1b (ENSKMAG00000006193)	CACNB3 (ENSKMAG00000006152)	ADCY6 (ENSKMAG00000006103)	galnt6 (ENSKMAG00000006044)	G6PD (ENSKMAG00000006021)	zgc:158263 (ENSKMAG00000005985)	naa10 (ENSKMAG00000005952)	arhgap4a (ENSKMAG00000005896)	ssr4 (ENSKMAG00000005845)	AVPR2 (ENSKMAG00000005823)	idh3g (ENSKMAG00000005778)	fam3a (ENSKMAG00000005735) ##22	ENSKMAG00000005716	WNK3 (ENSKMAG00000005689)	phf8 (ENSKMAG00000005611)	HUWE1 (ENSKMAG00000005429)	l1cama (ENSKMAG00000005329)	ribc1 (ENSKMAG00000005301)	smc1al (ENSKMAG00000005218)	cacna1sb (ENSKMAG00000004901)	tmem9 (ENSKMAG00000004819)	C1QL4 (ENSKMAG00000004802)	zgc:153867 (ENSKMAG00000004763)	neurod4 (ENSKMAG00000004746)	birc5b (ENSKMAG00000004735)	ZNF385A (ENSKMAG00000004707)	tac3a (ENSKMAG00000004673)
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Pomacentridae	ANCESTRAL SPECIES	2	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Pomacentridae_A	ANCESTRAL SPECIES	12	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000154578.A.d	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A.g	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Amphiprion	ANCESTRAL SPECIES	22		ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A.g	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Clown anemonefish	MODERN SPECIES	1575	mipa (ENSAOCG00000008686)	ptges3a (ENSAOCG00000008702)	dtx3 (ENSAOCG00000008710)	ENSAOCG00000008722	rnd1b (ENSAOCG00000008749)	CACNB3 (ENSAOCG00000008945)	ADCY6 (ENSAOCG00000009049)	galnt6 (ENSAOCG00000009073)	G6PD (ENSAOCG00000009123)	zgc:158263 (ENSAOCG00000009194)	naa10 (ENSAOCG00000009245)	arhgap4a (ENSAOCG00000009278)	ssr4 (ENSAOCG00000009309)	AVPR2 (ENSAOCG00000009354)	idh3g (ENSAOCG00000002531)	fam3a (ENSAOCG00000009383) ##22	ENSAOCG00000000571	phf8 (ENSAOCG00000002387)	HUWE1 (ENSAOCG00000000593)	ENSAOCG00000009673	l1cama (ENSAOCG00000009751)	ribc1 (ENSAOCG00000009785)	smc1al (ENSAOCG00000009905)
Orange clownfish	MODERN SPECIES	22	mipa (ENSAPEG00000021881)	ptges3a (ENSAPEG00000021897)	dtx3 (ENSAPEG00000021909)	ENSAPEG00000021915	rnd1b (ENSAPEG00000021925)	CACNB3 (ENSAPEG00000021951)	ADCY6 (ENSAPEG00000022104)	galnt6 (ENSAPEG00000022172)	G6PD (ENSAPEG00000022195)	zgc:158263 (ENSAPEG00000022216)	naa10 (ENSAPEG00000022239)	arhgap4a (ENSAPEG00000000299)	ssr4 (ENSAPEG00000000443)	AVPR2 (ENSAPEG00000000467)	idh3g (ENSAPEG00000000489)	fam3a (ENSAPEG00000000539) ##22	ENSAPEG00000000575	ENSAPEG00000000640	phf8 (ENSAPEG00000000698)	HUWE1 (ENSAPEG00000000881)	l1cama (ENSAPEG00000001589)	ribc1 (ENSAPEG00000001700)	smc1al (ENSAPEG00000001735)	cacna1sb (ENSAPEG00000001852)	tmem9 (ENSAPEG00000001984)	C1QL4 (ENSAPEG00000002005)	zgc:153867 (ENSAPEG00000002021)	neurod4 (ENSAPEG00000002047)	birc5b (ENSAPEG00000002074)	ZNF385A (ENSAPEG00000002080)	tac3a (ENSAPEG00000002106)
Spiny chromis	MODERN SPECIES	360										zgc:158263 (ENSAPOG00000006929)	naa10 (ENSAPOG00000006874)	arhgap4a (ENSAPOG00000000896)	ssr4 (ENSAPOG00000006786)	AVPR2 (ENSAPOG00000001002)	idh3g (ENSAPOG00000006735)	fam3a (ENSAPOG00000006683) ##22	WNK3 (ENSAPOG00000006629)	phf8 (ENSAPOG00000006591)	HUWE1 (ENSAPOG00000006455)	l1cama (ENSAPOG00000006196)	ribc1 (ENSAPOG00000006052)	smc1al (ENSAPOG00000000156)	cacna1sb (ENSAPOG00000005809)	tmem9 (ENSAPOG00000004848)	C1QL4 (ENSAPOG00000004812)	zgc:153867 (ENSAPOG00000004767)	neurod4 (ENSAPOG00000004718)	birc5b (ENSAPOG00000004694)	ZNF385A (ENSAPOG00000004652)	c1galt1la (ENSAPOG00000004597)	tac3a (ENSAPOG00000004577)
Bicolor damselfish	MODERN SPECIES	920						CACNB3 (ENSSPAG00000019859)	ADCY6 (ENSSPAG00000019893)	galnt6 (ENSSPAG00000019974)	G6PD (ENSSPAG00000020023)	zgc:158263 (ENSSPAG00000020077)	naa10 (ENSSPAG00000020139)	arhgap4a (ENSSPAG00000020354)	ssr4 (ENSSPAG00000020493)	AVPR2 (ENSSPAG00000020513)	idh3g (ENSSPAG00000020526)	fam3a (ENSSPAG00000020574) ##22	WNK3 (ENSSPAG00000020615)	phf8 (ENSSPAG00000020650)	HUWE1 (ENSSPAG00000020753)	l1cama (ENSSPAG00000020948)	ribc1 (ENSSPAG00000021021)	smc1al (ENSSPAG00000021044)
Cichlidae	ANCESTRAL SPECIES		ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	17	ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Haplochromini	ANCESTRAL SPECIES	18	ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Burton s mouthbrooder	MODERN SPECIES	277	stat6 (ENSHBUG00000023428)	mipa (ENSHBUG00000023441)	ptges3a (ENSHBUG00000023457)	dtx3 (ENSHBUG00000023469)	rnd1b (ENSHBUG00000023506)	CACNB3 (ENSHBUG00000023538)	ADCY6 (ENSHBUG00000023606)	galnt6 (ENSHBUG00000023617)	G6PD (ENSHBUG00000023637)	zgc:158263 (ENSHBUG00000023682)	naa10 (ENSHBUG00000023737)	arhgap4a (ENSHBUG00000023747)	ssr4 (ENSHBUG00000023757)	AVPR2 (ENSHBUG00000023808)	ENSHBUG00000023839	fam3a (ENSHBUG00000000057) ##22	ENSHBUG00000002770	phf8 (ENSHBUG00000002801)	ENSHBUG00000002815	HUWE1 (ENSHBUG00000002965)	l1cama (ENSHBUG00000000070)	ribc1 (ENSHBUG00000003387)	smc1al (ENSHBUG00000003482)	cacna1sb (ENSHBUG00000003865)	tmem9 (ENSHBUG00000003926)	C1QL4 (ENSHBUG00000003934)	zgc:153867 (ENSHBUG00000003977)	neurod4 (ENSHBUG00000004000)	birc5b (ENSHBUG00000004010)	ZNF385A (ENSHBUG00000004041)	ENSHBUG00000004060
Haplochromini_A	ANCESTRAL SPECIES	22	ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
P. nyererei	MODERN SPECIES	342	stat6 (ENSPNYG00000021725)	mipa (ENSPNYG00000021692)	ptges3a (ENSPNYG00000021676)	dtx3 (ENSPNYG00000021661)	rnd1b (ENSPNYG00000021635)	ENSPNYG00000021623	ADCY6 (ENSPNYG00000021584)	galnt6 (ENSPNYG00000021530)	G6PD (ENSPNYG00000021513)	zgc:158263 (ENSPNYG00000021483)	naa10 (ENSPNYG00000021464)	arhgap4a (ENSPNYG00000021431)	ssr4 (ENSPNYG00000021417)	AVPR2 (ENSPNYG00000021402)	idh3g (ENSPNYG00000021363)	fam3a (ENSPNYG00000021337) ##22	WNK3 (ENSPNYG00000021299)	phf8 (ENSPNYG00000021215)	HUWE1 (ENSPNYG00000021015)	l1cama (ENSPNYG00000020761)	ribc1 (ENSPNYG00000020711)	smc1al (ENSPNYG00000020647)	cacna1sb (ENSPNYG00000020299)	tmem9 (ENSPNYG00000020233)	C1QL4 (ENSPNYG00000020221)	ENSPNYG00000020207	zgc:153867 (ENSPNYG00000020185)	neurod4 (ENSPNYG00000020175)	birc5b (ENSPNYG00000020164)	ZNF385A (ENSPNYG00000020147)	tac3a (ENSPNYG00000020132)
Haplochromini_B	ANCESTRAL SPECIES	19	ENSGT01080000257420.C.b.a	ENSGT00940000156260.d	ENSGT00940000154256.`c	ENSGT00940000161404	ENSGT00940000158666.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT00390000008992	ENSGT01050000244882.b.c.b.a	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b.d	ENSGT00390000000819.b	ENSGT00940000155969.y.b	ENSGT01030000234570.d.b.a.a.g.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Eastern happy	MODERN SPECIES	12	mipa (ENSACLG00000003244)	ptges3a (ENSACLG00000003254)	dtx3 (ENSACLG00000003269)	rnd1b (ENSACLG00000003282)	CACNB3 (ENSACLG00000003302)	ADCY6 (ENSACLG00000003564)	galnt6 (ENSACLG00000003608)	G6PD (ENSACLG00000003619)	zgc:158263 (ENSACLG00000003680)	naa10 (ENSACLG00000003714)	arhgap4a (ENSACLG00000003734)	ssr4 (ENSACLG00000003780)	ENSACLG00000003975	AVPR2 (ENSACLG00000003982)	idh3g (ENSACLG00000004002)	fam3a (ENSACLG00000004140) ##22	ENSACLG00000004180	phf8 (ENSACLG00000004276)	HUWE1 (ENSACLG00000004379)	l1cama (ENSACLG00000004611)	ribc1 (ENSACLG00000004660)	smc1al (ENSACLG00000004712)	cacna1sb (ENSACLG00000004840)	tmem9 (ENSACLG00000005051)	C1QL4 (ENSACLG00000005071)	zgc:153867 (ENSACLG00000005087)	neurod4 (ENSACLG00000005139)	birc5b (ENSACLG00000005142)	ZNF385A (ENSACLG00000005163)	tac3a (ENSACLG00000005246)	c1galt1la (ENSACLG00000005257)
Zebra mbuna	MODERN SPECIES	1103	stat6 (ENSMZEG00005000290)	mipa (ENSMZEG00005000282)	ptges3a (ENSMZEG00005000280)	dtx3 (ENSMZEG00005000276)	rnd1b (ENSMZEG00005000231)	ENSMZEG00005027254	ADCY6 (ENSMZEG00005027249)	galnt6 (ENSMZEG00005027246)	G6PD (ENSMZEG00005027244)	zgc:158263 (ENSMZEG00005027242)	naa10 (ENSMZEG00005027240)	arhgap4a (ENSMZEG00005027239)	ssr4 (ENSMZEG00005027238)	AVPR2 (ENSMZEG00005027237)	idh3g (ENSMZEG00005027236)	fam3a (ENSMZEG00005027235) ##22	WNK3 (ENSMZEG00005027234)	phf8 (ENSMZEG00005027233)	HUWE1 (ENSMZEG00005027230)	l1cama (ENSMZEG00005027229)	ribc1 (ENSMZEG00005027228)	smc1al (ENSMZEG00005027227)	cacna1sb (ENSMZEG00005027226)	tmem9 (ENSMZEG00005027225)	C1QL4 (ENSMZEG00005027224)	zgc:153867 (ENSMZEG00005027223)	neurod4 (ENSMZEG00005027222)	birc5b (ENSMZEG00005027221)	ZNF385A (ENSMZEG00005027220)	tac3a (ENSMZEG00005027219)	c1galt1la (ENSMZEG00005027218)
Lyretail cichlid	MODERN SPECIES	298	stat6 (ENSNBRG00000014356)	mipa (ENSNBRG00000014389)	ptges3a (ENSNBRG00000014401)	dtx3 (ENSNBRG00000014429)	rnd1b (ENSNBRG00000014457)	CACNB3 (ENSNBRG00000014539)	ADCY6 (ENSNBRG00000014570)	galnt6 (ENSNBRG00000014594)	G6PD (ENSNBRG00000014667)	zgc:158263 (ENSNBRG00000014821)	naa10 (ENSNBRG00000014855)	arhgap4a (ENSNBRG00000014890)	ssr4 (ENSNBRG00000014939)	AVPR2 (ENSNBRG00000015029)	idh3g (ENSNBRG00000015094)	fam3a (ENSNBRG00000015210) ##22	WNK3 (ENSNBRG00000015252)	phf8 (ENSNBRG00000015349)	HUWE1 (ENSNBRG00000015437)	l1cama (ENSNBRG00000015666)	ribc1 (ENSNBRG00000015891)	smc1al (ENSNBRG00000015949)	ENSNBRG00000016202	tmem9 (ENSNBRG00000016227)	C1QL4 (ENSNBRG00000016239)	zgc:153867 (ENSNBRG00000016250)	neurod4 (ENSNBRG00000016268)	birc5b (ENSNBRG00000016281)	ENSNBRG00000016305	ENSNBRG00000016328	c1galt1la (ENSNBRG00000016346)
Nile tilapia	MODERN SPECIES	12	stat6 (ENSONIG00000011930)	mipa (ENSONIG00000011938)	ptges3a (ENSONIG00000011940)	dtx3 (ENSONIG00000040313)	rnd1b (ENSONIG00000038567)	CACNB3 (ENSONIG00000011945)	ADCY6 (ENSONIG00000011957)	galnt6 (ENSONIG00000011973)	G6PD (ENSONIG00000011984)	zgc:158263 (ENSONIG00000011988)	naa10 (ENSONIG00000011991)	arhgap4a (ENSONIG00000011994)	ssr4 (ENSONIG00000036077)	AVPR2 (ENSONIG00000032219)	idh3g (ENSONIG00000012002)	fam3a (ENSONIG00000012005) ##22	WNK3 (ENSONIG00000029710)	phf8 (ENSONIG00000012011)	HUWE1 (ENSONIG00000012021)	l1cama (ENSONIG00000012032)	ribc1 (ENSONIG00000012047)	smc1al (ENSONIG00000012052)	cacna1sb (ENSONIG00000012059)	tmem9 (ENSONIG00000012101)	C1QL4 (ENSONIG00000012102)	zgc:153867 (ENSONIG00000012103)	ENSONIG00000040374	neurod4 (ENSONIG00000020540)	birc5b (ENSONIG00000012106)	ZNF385A (ENSONIG00000032855)	tac3a (ENSONIG00000034962)
Midas cichlid	MODERN SPECIES	814	stat6 (ENSACIG00000000828)	mipa (ENSACIG00000000627)	ptges3a (ENSACIG00000000593)	dtx3 (ENSACIG00000000565)	rnd1b (ENSACIG00000000550)	CACNB3 (ENSACIG00000000277)	ADCY6 (ENSACIG00000000168)	galnt6 (ENSACIG00000023351)	G6PD (ENSACIG00000023344)	zgc:158263 (ENSACIG00000023336)	naa10 (ENSACIG00000023332)	arhgap4a (ENSACIG00000023326)	ssr4 (ENSACIG00000023321)	AVPR2 (ENSACIG00000023316)	idh3g (ENSACIG00000023311)	fam3a (ENSACIG00000023304) ##22	phf8 (ENSACIG00000023286)	HUWE1 (ENSACIG00000023252)	l1cama (ENSACIG00000023139)	ribc1 (ENSACIG00000023115)	smc1al (ENSACIG00000023088)	cacna1sb (ENSACIG00000022926)	tmem9 (ENSACIG00000022891)	C1QL4 (ENSACIG00000022888)	zgc:153867 (ENSACIG00000022883)	neurod4 (ENSACIG00000022880)	birc5b (ENSACIG00000022871)	ZNF385A (ENSACIG00000022862)	ENSACIG00000022852	c1galt1la (ENSACIG00000022842)	b4galnt1a (ENSACIG00000022832)
Pinecone sodierfish	MODERN SPECIES	21	ptges3a (ENSMMDG00005018644)	ENSMMDG00005018622	dtx3 (ENSMMDG00005018618)	ENSMMDG00005018615	rnd1b (ENSMMDG00005018613)	CACNB3 (ENSMMDG00005018594)	ADCY6 (ENSMMDG00005018588)	galnt6 (ENSMMDG00005018546)	G6PD (ENSMMDG00005018501)	zgc:158263 (ENSMMDG00005018493)	naa10 (ENSMMDG00005018485)	arhgap4a (ENSMMDG00005018472)	ssr4 (ENSMMDG00005018455)	AVPR2 (ENSMMDG00005018415)	idh3g (ENSMMDG00005018105)	fam3a (ENSMMDG00005018102) ##22	WNK3 (ENSMMDG00005018016)	phf8 (ENSMMDG00005017979)	HUWE1 (ENSMMDG00005002216)	l1cama (ENSMMDG00005001673)	ribc1 (ENSMMDG00005001654)	smc1al (ENSMMDG00005001586)	cacna1sb (ENSMMDG00005001533)	tmem9 (ENSMMDG00005001516)	C1QL4 (ENSMMDG00005001508)	zgc:153867 (ENSMMDG00005001098)	neurod4 (ENSMMDG00005001091)	birc5b (ENSMMDG00005001089)	ZNF385A (ENSMMDG00005001057)	tac3a (ENSMMDG00005001051)	c1galt1la (ENSMMDG00005001049)
Cod	MODERN SPECIES		stat6 (ENSGMOG00000008275)	mipa (ENSGMOG00000032495)	ptges3a (ENSGMOG00000008282)	dtx3 (ENSGMOG00000033095)	rnd1b (ENSGMOG00000009588)	ENSGMOG00000008288	ENSGMOG00000008289	galnt6 (ENSGMOG00000008290)	ENSGMOG00000008292	zgc:158263 (ENSGMOG00000008297)	NAA10 (ENSGMOG00000008300)	arhgap4a (ENSGMOG00000008303)	ENSGMOG00000008305	AVPR2 (ENSGMOG00000008306)	idh3g (ENSGMOG00000008308)	fam3a (ENSGMOG00000008311) ##22	ENSGMOG00000025327	PHF8 (ENSGMOG00000008324)	HUWE1 (ENSGMOG00000008327)	RIBC1 (ENSGMOG00000008343)	SMC1A (ENSGMOG00000008344)	ENSGMOG00000008348	ENSGMOG00000003366	mfn2 (ENSGMOG00000003331)	PLOD1 (ENSGMOG00000003290)	si:dkeyp-104h9.5 (ENSGMOG00000003278)	ENSGMOG00000001773	CLCN6 (ENSGMOG00000001687)	mthfr (ENSGMOG00000001673)	ENSGMOG00000001654	ENSGMOG00000023994
Protacanthopterygii	ANCESTRAL SPECIES	6	ENSGT00940000154256.`c	ENSGT00440000033468.k.b	ENSGT00940000161404	ENSGT00940000169526	ENSGT00940000158666.a.a.a	ENSGT00950000182837.b.a.a	ENSGT00940000155687.e.b	ENSGT00940000166246.A	ENSGT00530000063435.a.a.b	ENSGT00940000167208	ENSGT00550000074803	ENSGT00950000182824.a.b.b.c	ENSGT01050000244882.b.c.b.a	ENSGT00390000008992	ENSGT00950000182989.D.a.a.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000157506.e	ENSGT00390000010825.a	ENSGT00940000155614	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00940000155969.y.a.b	ENSGT01030000234570.d.b.a.a.h.b	ENSGT00940000160217.a	ENSGT00940000161744	ENSGT00940000160876.a	ENSGT00390000000335	ENSGT00940000164002.k.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	525						ENSGT00950000182837.b.a.a.n.b	ENSGT00940000155687.e.b.k	ENSGT00940000166246.A.m.a	ENSGT00530000063435.a.a.b	ENSGT00940000167208.c	ENSGT00550000074803.a.a	ENSGT00950000182824.a.b.b.c.d	ENSGT01050000244882.b.c.b.a.c	ENSGT00390000008992.o	ENSGT00950000182989.D.a.a.a.d	ENSGT00950000183004.a.a.a.b.e ##22	ENSGT00940000160145.b	ENSGT00940000157847.s.b	ENSGT00940000156319.db.b	ENSGT00940000157506.e.d	ENSGT00940000155614.h	ENSGT00390000000819.b.f.b.a	ENSGT00390000012710.b.a	ENSGT00390000000819.b.f.b.b
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000156260.d.d	ENSGT00940000154256.`c.c	ENSGT00440000033468.k.b	ENSGT00940000161404.a	ENSGT00940000158666.a.a.a.a	ENSGT00950000182837.b.a.a.n.b	ENSGT00940000155687.e.b.k	ENSGT00940000166246.A.m.a	ENSGT00530000063435.a.a.b	ENSGT00940000167208.c	ENSGT00550000074803.a.a	ENSGT00950000182824.a.b.b.c.d	ENSGT01050000244882.b.c.b.a.c	ENSGT00390000008992.o	ENSGT00950000182989.D.a.a.a.d	ENSGT00950000183004.a.a.a.b.e ##22	ENSGT00940000160145.b	ENSGT00940000157847.s.b	ENSGT00940000156319.db.b	ENSGT00940000157506.e.d	ENSGT00940000155614.h	ENSGT00390000000819.b.f.b.a	ENSGT00940000155969.y.a.b.a	ENSGT01030000234570.d.b.a.a.h.b	ENSGT00940000160217.a.d	ENSGT00940000161744.i	ENSGT00940000160876.a.e.b	ENSGT00390000000335.a	ENSGT00940000164002.k.a.f	ENSGT00390000006679.a.f	ENSGT00940000166618.k.a
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000156260.d.d	ENSGT00940000154256.`c.c	ENSGT00440000033468.k.b	ENSGT00940000161404.a	ENSGT00940000158666.a.a.a.a	ENSGT00950000182837.b.a.a.n.b	ENSGT00940000155687.e.b.k	ENSGT00940000166246.A.m.a	ENSGT00530000063435.a.a.b	ENSGT00940000167208.c	ENSGT00550000074803.a.a	ENSGT00950000182824.a.b.b.c.d	ENSGT01050000244882.b.c.b.a.c	ENSGT00390000008992.o	ENSGT00950000182989.D.a.a.a.d	ENSGT00950000183004.a.a.a.b.e ##22	ENSGT00940000160145.a.a	ENSGT00940000157847.s.b	ENSGT00940000156319.db.b	ENSGT00940000157506.e.d	ENSGT00940000155614.h	ENSGT00390000000819.b.f.b.a	ENSGT00940000155969.y.a.b.a	ENSGT01030000234570.d.b.a.a.h.b	ENSGT00940000160217.a.d	ENSGT00940000161744.i	ENSGT00940000160876.a.e.b	ENSGT00390000000335.a	ENSGT00940000164002.k.a.f	ENSGT00390000006679.a.f	ENSGT00940000166618.k.a
River trout	MODERN SPECIES	20	ptges3a (ENSSTUG00000013905)	ENSSTUG00000013925	dtx3 (ENSSTUG00000014047)	rnd1b (ENSSTUG00000014087)	ENSSTUG00000014092	CACNB3 (ENSSTUG00000014099)	ADCY6 (ENSSTUG00000014158)	galnt6 (ENSSTUG00000015887)	G6PD (ENSSTUG00000016272)	zgc:158263 (ENSSTUG00000016350)	naa10 (ENSSTUG00000016376)	arhgap4a (ENSSTUG00000016448)	AVPR2 (ENSSTUG00000016474)	ssr4 (ENSSTUG00000016478)	idh3g (ENSSTUG00000016541)	fam3a (ENSSTUG00000016728) ##22	ENSSTUG00000016755	phf8 (ENSSTUG00000016788)	HUWE1 (ENSSTUG00000017735)	l1cama (ENSSTUG00000024645)	l1cama (ENSSTUG00000025134)	SMC1A (ENSSTUG00000025324)	tmem9 (ENSSTUG00000025701)	ENSSTUG00000025730	C1QL4 (ENSSTUG00000025733)	ENSSTUG00000025740	zgc:153867 (ENSSTUG00000025761)	ENSSTUG00000026055	neurod4 (ENSSTUG00000026063)	birc5b (ENSSTUG00000026069)	ENSSTUG00000026077
Atlantic salmon	MODERN SPECIES	6	dtx3 (ENSSSAG00000041405)	ENSSSAG00000103535	ENSSSAG00000089188	RND1 (ENSSSAG00000039073)	ENSSSAG00000114035	ENSSSAG00000040958	ENSSSAG00000113151	ADCY6 (ENSSSAG00000024733)	ENSSSAG00000012488	zgc:158263 (ENSSSAG00000090990)	ENSSSAG00000011256	ENSSSAG00000010799	ENSSSAG00000010725	ssrd (ENSSSAG00000010584)	idh3g (ENSSSAG00000010302)	fam3a (ENSSSAG00000103659) ##22	WNK3 (ENSSSAG00000094744)	ENSSSAG00000009854	HUWE1 (ENSSSAG00000009738)	ENSSSAG00000008173	ENSSSAG00000105043	ENSSSAG00000009847	ENSSSAG00000006452	ENSSSAG00000110198	ENSSSAG00000006330	ENSSSAG00000106668	ENSSSAG00000094423	myl6b (ENSSSAG00000006022)	ENSSSAG00000090289	birc5b (ENSSSAG00000095509)	ENSSSAG00000102865
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000156260.d.d	ENSGT00940000154256.`c.c	ENSGT00440000033468.k.b	ENSGT00940000161404.a	ENSGT00940000158666.a.a.a.a	ENSGT00950000182837.b.a.a.n.b	ENSGT00940000155687.e.b.k	ENSGT00940000166246.A.n	ENSGT00530000063435.a.a.b	ENSGT00940000167208.c	ENSGT00550000074803.a.a	ENSGT00950000182824.a.b.b.c.d	ENSGT01050000244882.b.c.b.a.c	ENSGT00390000008992.o	ENSGT00950000182989.D.a.a.a.d	ENSGT00950000183004.a.a.a.b.e ##22	ENSGT00940000160145.b	ENSGT00940000157847.s.b	ENSGT00940000156319.db.b	ENSGT00940000157506.e.d	ENSGT00940000155614.h	ENSGT00390000012710.b.a	ENSGT00390000000819.b.f.a	ENSGT00940000155969.y.a.b.a	ENSGT01030000234570.d.b.a.a.h.b	ENSGT00940000160217.a.d	ENSGT00940000161744.i	ENSGT00940000160876.a.e.b	ENSGT00940000177181	ENSGT00940000160876.a.f.b	ENSGT00390000000335.a
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000066780	RND1 (ENSOMYG00000059160)	ENSOMYG00000018763	ENSOMYG00000054902	ENSOMYG00000074227	ADCY6 (ENSOMYG00000018723)	galnt6 (ENSOMYG00000018610)	ENSOMYG00000018063	zgc:158263 (ENSOMYG00000018022)	ENSOMYG00000017698	ENSOMYG00000017660	ENSOMYG00000064354	ENSOMYG00000017649	SSRD (ENSOMYG00000017595)	idh3g (ENSOMYG00000016155)	ENSOMYG00000016093 ##22	ENSOMYG00000064444	ENSOMYG00000015951	HUWE1 (ENSOMYG00000015460)	ENSOMYG00000015311	ENSOMYG00000062947	ENSOMYG00000015220	ENSOMYG00000015131	ENSOMYG00000015122	ENSOMYG00000071354	ENSOMYG00000015071	ENSOMYG00000015039	ENSOMYG00000014868	ENSOMYG00000064888	ENSOMYG00000070964	ENSOMYG00000014222
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000170524.b	ENSGT00940000161971.q.b	ENSGT00940000156260.d.d	ENSGT00940000154256.`c.c	ENSGT00440000033468.k.b	ENSGT00940000161404.a	ENSGT00940000158666.a.a.a.a	ENSGT00940000155687.e.b.k	ENSGT00940000166246.A.m.a	ENSGT00530000063435.a.a.b	ENSGT00940000167208.c	ENSGT00550000074803.a.a	ENSGT01050000244882.b.c.b.a.c	ENSGT00390000008992.o	ENSGT00950000182989.D.a.a.a.d	ENSGT00950000183004.a.a.a.b.e ##22	ENSGT00940000160145.a.a	ENSGT00940000157847.s.b	ENSGT00940000156319.db.b	ENSGT00940000157506.e.d	ENSGT00940000155614.h	ENSGT00390000012710.b.a	ENSGT00390000000819.b.f.a	ENSGT00940000155969.y.a.b.a	ENSGT01030000234570.d.b.a.a.h.b	ENSGT00940000160217.a.d	ENSGT00940000161744.i	ENSGT00940000160876.a.e.b	ENSGT00940000177181	ENSGT00940000160876.a.f.b	ENSGT00390000000335.a
Coho salmon	MODERN SPECIES	8	MIP (ENSOKIG00005044301)	PTGES3 (ENSOKIG00005044268)	ENSOKIG00005044215	dtx3 (ENSOKIG00005044145)	rnd1b (ENSOKIG00005044124)	ADCY6 (ENSOKIG00005043775)	ENSOKIG00005043542	G6PD (ENSOKIG00005043196)	zgc:158263 (ENSOKIG00005043168)	naa10 (ENSOKIG00005042832)	ENSOKIG00005042786	ENSOKIG00005042777	ENSOKIG00005042744	SSR4 (ENSOKIG00005042622)	idh3g (ENSOKIG00005041973)	FAM3A (ENSOKIG00005041922) ##22	ENSOKIG00005041842	PHF8 (ENSOKIG00005041701)	HUWE1 (ENSOKIG00005040585)	ENSOKIG00005040543	ENSOKIG00005040160	SMC1A (ENSOKIG00005039978)	ENSOKIG00005039958	TMEM9 (ENSOKIG00005039949)	ENSOKIG00005039823	NEUROD4 (ENSOKIG00005039810)	birc5b (ENSOKIG00005039805)	ENSOKIG00005039792	ENSOKIG00005039784	c1galt1la (ENSOKIG00005039778)	b4galnt1a (ENSOKIG00005039762)
Chinook salmon	MODERN SPECIES	7	ENSOTSG00005033057	pfkma (ENSOTSG00005033018)	ITGB7 (ENSOTSG00005033009)	ENSOTSG00005033006	mpx (ENSOTSG00005033005)	ENSOTSG00005033004	atf7a (ENSOTSG00005033003)	dip2ba (ENSOTSG00005010419)	ENSOTSG00005010402	ENSOTSG00005010401	ENSOTSG00005010400	ENSOTSG00005010399	AVPR2 (ENSOTSG00005010398)	ssr4 (ENSOTSG00005010359)	idh3g (ENSOTSG00005010249)	fam3a (ENSOTSG00005010244) ##22	ENSOTSG00005010243	phf8 (ENSOTSG00005010113)	HUWE1 (ENSOTSG00005010105)	l1cama (ENSOTSG00005010092)	SMC1A (ENSOTSG00005010080)	ENSOTSG00005010075	tmem9 (ENSOTSG00005010072)	ENSOTSG00005010069	C1QL4 (ENSOTSG00005010067)	zgc:153867 (ENSOTSG00005010040)	neurod4 (ENSOTSG00005010039)	ENSOTSG00005010037	birc5b (ENSOTSG00005010035)	ANKRD33 (ENSOTSG00005010033)	acvrl1 (ENSOTSG00005010032)
Huchen	MODERN SPECIES	1803											ENSHHUG00000009629	ENSHHUG00000009633	ENSHHUG00000009636	ssr4 (ENSHHUG00000009647)	idh3g (ENSHHUG00000009711)	fam3a (ENSHHUG00000009770) ##22
Salmoninae	ANCESTRAL SPECIES	63	ENSGT00940000156260.d.c	ENSGT00940000154256.`c.d	ENSGT00440000033468.l	ENSGT00940000161404.b	ENSGT00940000169526	ENSGT00940000158666.a.a.a.b	ENSGT00950000182837.b.a.a.n.a	ENSGT00940000155687.e.b.l	ENSGT00940000166246.A.m.b	ENSGT00940000167208.d	ENSGT00550000074803.a.b	ENSGT00950000182824.a.b.b.c.c	ENSGT01050000244882.b.c.b.a.d	ENSGT00390000008992.p	ENSGT00950000182989.D.a.a.a.c	ENSGT00950000183004.a.a.a.b.f ##22	ENSGT00940000160145.a.b	ENSGT00940000157847.s.a	ENSGT00940000156319.db.a	ENSGT00940000157506.e.c	ENSGT00390000010825.a	ENSGT00940000155614.g	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b.e	ENSGT00940000155969.y.a.b.b	ENSGT01030000234570.d.b.a.a.h.a	ENSGT00940000160217.a.c	ENSGT00940000161744.j	ENSGT00940000160876.a.e	ENSGT00390000000335.b	ENSGT00940000164002.k.a.e
Salmoninae_a	ANCESTRAL SPECIES	14	ENSGT00940000156260.d.c	ENSGT00940000154256.`c.d	ENSGT00440000033468.l	ENSGT00940000161404.b	ENSGT00940000169526	ENSGT00940000158666.a.a.a.b	ENSGT00950000182837.b.a.a.n.a	ENSGT00940000155687.e.b.l	ENSGT00940000166246.A.m.b	ENSGT00940000167208.d	ENSGT00550000074803.a.b	ENSGT00950000182824.a.b.b.c.c	ENSGT01050000244882.b.c.b.a.d	ENSGT00390000008992.p	ENSGT00950000182989.D.a.a.a.c	ENSGT00950000183004.a.a.a.b.f ##22	ENSGT00940000160145.a.b	ENSGT00940000157847.s.a	ENSGT00940000156319.db.a	ENSGT00940000157506.e.c	ENSGT00390000010825.a	ENSGT00940000155614.g	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b.e	ENSGT00940000155969.y.a.b.b	ENSGT01030000234570.d.b.a.a.h.a	ENSGT00940000160217.a.c	ENSGT00940000161744.j	ENSGT00940000160876.a.e.a	ENSGT00390000000335.b	ENSGT00940000164002.k.a.e
Salmo	ANCESTRAL SPECIES	4	ENSGT00940000154256.`c.d	ENSGT00940000154256.ac.d	ENSGT00440000033468.l	ENSGT00940000161404.b	ENSGT00940000169526	ENSGT00940000158666.a.a.a.b	ENSGT00950000182837.b.a.a.n.a	ENSGT00940000155687.e.b.l	ENSGT00940000166246.A.m.b	ENSGT00940000167208.d	ENSGT00550000074803.a.b	ENSGT00950000182824.a.b.b.c.c	ENSGT01050000244882.b.c.b.a.d	ENSGT00390000008992.p	ENSGT00950000182989.D.a.a.a.c	ENSGT00950000183004.a.a.a.b.f ##22	ENSGT00940000160145.a.b	ENSGT00940000157847.s.a	ENSGT00940000156319.db.a	ENSGT00940000157506.e.c	ENSGT00390000010825.a	ENSGT00940000155614.g	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b.e	ENSGT00940000155969.y.a.b.b	ENSGT01030000234570.d.b.a.a.h.a	ENSGT00940000160217.a.c	ENSGT00940000161744.j	ENSGT00940000160876.a.e.a	ENSGT00390000000335.b	ENSGT00940000164002.k.a.e
Atlantic salmon	MODERN SPECIES	4	RND1 (ENSSSAG00000115763)	ENSSSAG00000039238	ENSSSAG00000090459	ENSSSAG00000103771	ENSSSAG00000095598	ADCY6 (ENSSSAG00000040777)	galnt6 (ENSSSAG00000049562)	ENSSSAG00000098866	zgc:158263 (ENSSSAG00000050770)	ENSSSAG00000050780	ENSSSAG00000050815	ENSSSAG00000087001	ENSSSAG00000119143	SSRD (ENSSSAG00000050861)	idh3g (ENSSSAG00000051336)	ENSSSAG00000051542 ##22	ENSSSAG00000089762	ENSSSAG00000051584	HUWE1 (ENSSSAG00000052314)	ENSSSAG00000106433	ENSSSAG00000064433	ribc1 (ENSSSAG00000064479)	ENSSSAG00000064516	ENSSSAG00000064867	ENSSSAG00000087059	ENSSSAG00000121996	ENSSSAG00000068612	ENSSSAG00000099547	birc5b (ENSSSAG00000068971)	ENSSSAG00000097743	tac3a (ENSSSAG00000068989)
River trout	MODERN SPECIES	23	stat6 (ENSSTUG00000035341)	mipa (ENSSTUG00000035954)	ptges3a (ENSSTUG00000035965)	dtx3 (ENSSTUG00000035988)	ENSSTUG00000036016	rnd1b (ENSSTUG00000036020)	CACNB3 (ENSSTUG00000036026)	ADCY6 (ENSSTUG00000036121)	galnt6 (ENSSTUG00000037954)	zgc:158263 (ENSSTUG00000038594)	naa10 (ENSSTUG00000038639)	arhgap4a (ENSSTUG00000038682)	ENSSTUG00000038695	ssr4 (ENSSTUG00000038710)	idh3g (ENSSTUG00000038791)	fam3a (ENSSTUG00000038966) ##22	ENSSTUG00000038979	phf8 (ENSSTUG00000039017)	HUWE1 (ENSSTUG00000039268)	l1cama (ENSSTUG00000040268)	ribc1 (ENSSTUG00000040906)	smc1al (ENSSTUG00000041015)	cacna1sb (ENSSTUG00000043975)	tmem9 (ENSSTUG00000046492)	C1QL4 (ENSSTUG00000046506)	ENSSTUG00000046515	neurod4 (ENSSTUG00000046622)	birc5b (ENSSTUG00000046627)	ZNF385A (ENSSTUG00000046633)	tac3a (ENSSTUG00000046654)	c1galt1la (ENSSTUG00000046663)
Oncorhynchus	ANCESTRAL SPECIES	7	ENSGT00940000156260.d.c	ENSGT00940000154256.`c.d	ENSGT00440000033468.l	ENSGT00940000161404.b	ENSGT00940000169526	ENSGT00940000158666.a.a.a.b	ENSGT00950000182837.b.a.a.n.a	ENSGT00940000155687.e.b.l	ENSGT00940000166246.A.m.b	ENSGT00940000167208.d	ENSGT00550000074803.a.b	ENSGT00950000182824.a.b.b.c.c	ENSGT01050000244882.b.c.b.a.d	ENSGT00390000008992.p	ENSGT00950000182989.D.a.a.a.c	ENSGT00950000183004.a.a.a.b.f ##22	ENSGT00940000160145.a.b	ENSGT00940000157847.s.a	ENSGT00940000156319.db.a	ENSGT00940000157506.e.c	ENSGT00390000010825.a	ENSGT00940000155614.g	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b.e	ENSGT00940000155969.y.a.b.b	ENSGT01030000234570.d.b.a.a.h.a	ENSGT00940000160217.a.c	ENSGT00940000161744.j	ENSGT00940000160876.a.e.a	ENSGT00390000000335.b	ENSGT00940000164002.k.a.e
Rainbow trout	MODERN SPECIES	7	dtx3 (ENSOMYG00000039985)	ENSOMYG00000008111	ENSOMYG00000039993	RND1 (ENSOMYG00000040000)	ENSOMYG00000040011	ADCY6 (ENSOMYG00000040116)	galnt6 (ENSOMYG00000040767)	zgc:158263 (ENSOMYG00000040958)	ENSOMYG00000040976	ENSOMYG00000040989	ENSOMYG00000070620	ENSOMYG00000040995	ENSOMYG00000041008	idh3g (ENSOMYG00000017674)	ENSOMYG00000049585	ENSOMYG00000018635 ##22	ENSOMYG00000032480	ENSOMYG00000018720	HUWE1 (ENSOMYG00000018861)	ENSOMYG00000019185	ribc1 (ENSOMYG00000019259)	ENSOMYG00000019609	ENSOMYG00000021589	ENSOMYG00000064932	ENSOMYG00000022988	ENSOMYG00000023055	ENSOMYG00000023173	birc5b (ENSOMYG00000023185)	ENSOMYG00000023214	tac3a (ENSOMYG00000023225)	c1galt1la (ENSOMYG00000023242)
Oncorhynchus_a	ANCESTRAL SPECIES	9	ENSGT00940000156260.d.c	ENSGT00940000154256.`c.d	ENSGT00440000033468.l	ENSGT00940000161404.b	ENSGT00940000169526	ENSGT00940000158666.a.a.a.b	ENSGT00950000182837.b.a.a.n.a	ENSGT00940000155687.e.b.l	ENSGT00940000166246.A.m.b	ENSGT00940000167208.d	ENSGT00550000074803.a.b	ENSGT00950000182824.a.b.b.c.c	ENSGT01050000244882.b.c.b.a.d	ENSGT00390000008992.p	ENSGT00950000182989.D.a.a.a.c	ENSGT00950000183004.a.a.a.b.f ##22	ENSGT00940000160145.a.b	ENSGT00940000157847.s.a	ENSGT00940000156319.db.a	ENSGT00940000157506.e.c	ENSGT00390000010825.a	ENSGT00940000155614.g	ENSGT00940000158289.a.b.b	ENSGT00390000000819.b.e	ENSGT00940000155969.y.a.b.b	ENSGT01030000234570.d.b.a.a.h.a	ENSGT00940000160217.a.c	ENSGT01000000220533	ENSGT00940000160876.a.f.a	ENSGT00390000000335.b	ENSGT00940000164002.k.a.e
Coho salmon	MODERN SPECIES	16	ptges3a (ENSOKIG00005018491)	ENSOKIG00005018517	dtx3 (ENSOKIG00005018539)	ENSOKIG00005018562	ENSOKIG00005018568	RND1 (ENSOKIG00005018579)	CACNB3 (ENSOKIG00005018603)	ENSOKIG00005018769	ADCY6 (ENSOKIG00005018883)	galnt6 (ENSOKIG00005020199)	zgc:158263 (ENSOKIG00005020575)	NAA10 (ENSOKIG00005020602)	arhgap4a (ENSOKIG00005020650)	AVPR2 (ENSOKIG00005020657)	idh3g (ENSOKIG00005020690)	fam3a (ENSOKIG00005021142) ##22	ENSOKIG00005021153	ENSOKIG00005021159	phf8 (ENSOKIG00005021179)	HUWE1 (ENSOKIG00005021459)	l1cama (ENSOKIG00005022257)	ribc1 (ENSOKIG00005022440)	smc1al (ENSOKIG00005022724)	cacna1sb (ENSOKIG00005026061)	tmem9 (ENSOKIG00005027415)	C1QL4 (ENSOKIG00005027423)	ENSOKIG00005027437	neurod4 (ENSOKIG00005027511)	ENSOKIG00005027526	ZNF385A (ENSOKIG00005027606)	tac3a (ENSOKIG00005027622)
Chinook salmon	MODERN SPECIES	14	mipa (ENSOTSG00005045249)	ptges3a (ENSOTSG00005045250)	ENSOTSG00005045251	dtx3 (ENSOTSG00005045252)	ENSOTSG00005045254	rnd1b (ENSOTSG00005045255)	CACNB3 (ENSOTSG00005045256)	ADCY6 (ENSOTSG00005045259)	galnt6 (ENSOTSG00005045621)	zgc:158263 (ENSOTSG00005045774)	naa10 (ENSOTSG00005045775)	arhgap4a (ENSOTSG00005045776)	AVPR2 (ENSOTSG00005045777)	ssr4 (ENSOTSG00005045778)	idh3g (ENSOTSG00005045780)	fam3a (ENSOTSG00005045828) ##22	ENSOTSG00005045829	phf8 (ENSOTSG00005045830)	l1cama (ENSOTSG00005045875)	ribc1 (ENSOTSG00005045876)	smc1al (ENSOTSG00005045879)	cacna1sb (ENSOTSG00005045984)	tmem9 (ENSOTSG00005046144)	ENSOTSG00005046146	C1QL4 (ENSOTSG00005046147)	zgc:153867 (ENSOTSG00005046151)	neurod4 (ENSOTSG00005046159)	ENSOTSG00005046165	skor1b (ENSOTSG00005046171)	ENSOTSG00005046172	ENSOTSG00005046174
Huchen	MODERN SPECIES	942														ssr4 (ENSHHUG00000007438)	idh3g (ENSHHUG00000007290)	fam3a (ENSHHUG00000007264) ##22	ENSHHUG00000007250	ENSHHUG00000007235	PHF8 (ENSHHUG00000007161)	ENSHHUG00000007152	ENSHHUG00000007103	l1cama (ENSHHUG00000007011)	ribc1 (ENSHHUG00000006986)	smc1al (ENSHHUG00000006533)	cacna1sb (ENSHHUG00000005647)
Northern pike	MODERN SPECIES	11	mipa (ENSELUG00000010678)	ptges3a (ENSELUG00000010660)	naca (ENSELUG00000010591)	dtx3 (ENSELUG00000010505)	rnd1b (ENSELUG00000010473)	CACNB3 (ENSELUG00000010451)	ADCY6 (ENSELUG00000010417)	galnt6 (ENSELUG00000010359)	G6PD (ENSELUG00000010323)	zgc:158263 (ENSELUG00000010288)	naa10 (ENSELUG00000010216)	arhgap4a (ENSELUG00000010080)	AVPR2 (ENSELUG00000010021)	ssr4 (ENSELUG00000009981)	idh3g (ENSELUG00000009956)	fam3a (ENSELUG00000009930) ##22	ENSELUG00000029155	phf8 (ENSELUG00000009858)	HUWE1 (ENSELUG00000001062)	l1cama (ENSELUG00000009638)	ribc1 (ENSELUG00000009494)	smc1al (ENSELUG00000009461)	cacna1sb (ENSELUG00000009395)	tmem9 (ENSELUG00000009346)	ENSELUG00000027235	C1QL4 (ENSELUG00000009309)	ENSELUG00000009277	neurod4 (ENSELUG00000009239)	ENSELUG00000009218	ZNF385A (ENSELUG00000009176)	tac3a (ENSELUG00000009102)
Reedfish	MODERN SPECIES	2	PRICKLE3 (ENSECRG00000009702)	sypb (ENSECRG00000009677)	cacna1fb (ENSECRG00000009592)	praf2 (ENSECRG00000009538)	ENSECRG00000009530	ENSECRG00000009518	timm17b (ENSECRG00000009503)	pqbp1 (ENSECRG00000009490)	MON1B (ENSECRG00000009475)	ENSECRG00000009457	ENSECRG00000009441	ENSECRG00000009397	gpkow (ENSECRG00000009377)	ENSECRG00000009354	idh3g (ENSECRG00000009320)	ENSECRG00000009294 ##22	jpt1a (ENSECRG00000009282)	ENSECRG00000009227	FAM120C (ENSECRG00000009189)	phf8 (ENSECRG00000009165)	HUWE1 (ENSECRG00000009128)	ENSECRG00000009072	hsd17b10 (ENSECRG00000009059)	smc1al (ENSECRG00000008973)	ENSECRG00000008948	ENSECRG00000008931	ENSECRG00000008903	slc6a8 (ENSECRG00000008845)	bcap31 (ENSECRG00000008809)	slc35a2 (ENSECRG00000008796)	pim2 (ENSECRG00000008783)
Sarcopterygii	ANCESTRAL SPECIES	211					ENSGT00940000164454	ENSGT00950000182835.c.c	ENSGT00940000162980	ENSGT00390000003348	ENSGT00940000155877	ENSGT00940000159438	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b	ENSGT00950000182989.D.a.a	ENSGT00390000008992	ENSGT00950000183004.a.a.a.b ##22	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000155170	ENSGT00390000010825.a	ENSGT00940000155614
Tetrapoda	ANCESTRAL SPECIES	262												ENSGT01030000240148	ENSGT00390000000950.c.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b
Amniota	ANCESTRAL SPECIES	40																ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b	ENSGT00940000153588.b	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.s.a	ENSGT00390000002034	ENSGT00940000164911
Mammalia	ANCESTRAL SPECIES	46															ENSGT00940000165180	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.s.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000164911
Theria	ANCESTRAL SPECIES	46	ENSGT00940000158132	ENSGT00390000018904	ENSGT00950000183068.a.a	ENSGT00390000000360	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000240148	ENSGT00390000000950.c.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.s.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000154471.a.a
Marsupialia	ANCESTRAL SPECIES	39	ENSGT00390000000360	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263570.B.z	ENSGT01100000263574.b.j.b.b.a	ENSGT01030000240148	ENSGT00390000000950.c.a.g	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00940000165180	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650.g.b	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.s.b	ENSGT00940000153588.b	ENSGT00390000002034
Marsupialia_b	ANCESTRAL SPECIES	35	ENSGT00390000000360	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263570.B.z	ENSGT01100000263574.b.j.b.b.a	ENSGT01030000240148	ENSGT00390000000950.c.a.g	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00940000165180	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.C.e.a	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650.g.b	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.s.b.d.b	ENSGT00940000153588.b	ENSGT00390000002034
Diprotodontia	ANCESTRAL SPECIES	79	ENSGT00390000018904.xb	ENSGT00950000183068.a.a	ENSGT00390000000360	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000240148	ENSGT00390000000950.c.a.g	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00940000165180	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.C.e.a	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650.g.b.a	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.s.b.d.b	ENSGT00940000153588.b	ENSGT00390000002034
Diprotodontia_a	ANCESTRAL SPECIES	74	ENSGT00390000018904.xb	ENSGT00950000183068.a.a	ENSGT00390000000360	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000240148	ENSGT00390000000950.c.a.g	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00940000165180	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.C.e.a.b	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650.g.b.a	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.s.b.d.b.a	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00950000182965.a.b.b.a.a.a.b.a.b.a.b	ENSGT00940000164911	ENSGT00390000013558.f
Common wonbat	MODERN SPECIES	1065	RAB39B (ENSVURG00010019528)	ENSVURG00010019523	ENSVURG00010019511	ENSVURG00010019499	MTCP1 (ENSVURG00010019490)	FUNDC2 (ENSVURG00010019480)	F8 (ENSVURG00010019188)	MPP1 (ENSVURG00010019129)	DKC1 (ENSVURG00010019113)	GAB3 (ENSVURG00010019104)	ENSVURG00010019100	ENSVURG00010019093	IKBKG (ENSVURG00010019077)	G6PD (ENSVURG00010019009)	ENSVURG00010018900	FAM3A (ENSVURG00010018864) ##22	SLC10A3 (ENSVURG00010018859)	UBL4A (ENSVURG00010018854)	PLXNA3 (ENSVURG00010018841)	ENSVURG00010018834	GDI1 (ENSVURG00010018825)	ENSVURG00010018815	TAFAZZIN (ENSVURG00010018809)	DNASE1L1 (ENSVURG00010018801)	ENSVURG00010018778	ENSVURG00010018760	FLNA (ENSVURG00010018669)	ENSVURG00010018644	ENSVURG00010018641	ENSVURG00010018533	ENSVURG00010018504
koala	MODERN SPECIES	275	RAB39B (ENSPCIG00000029333)	ENSPCIG00000029334	ENSPCIG00000029335	ENSPCIG00000029336	MTCP1 (ENSPCIG00000029337)	CMC4 (ENSPCIG00000012830)	FUNDC2 (ENSPCIG00000029338)	F8 (ENSPCIG00000029339)	MPP1 (ENSPCIG00000016705)	DKC1 (ENSPCIG00000016706)	GAB3 (ENSPCIG00000027141)	ENSPCIG00000027140	IKBKG (ENSPCIG00000027137)	G6PD (ENSPCIG00000003610)	ENSPCIG00000009019	FAM3A (ENSPCIG00000027132) ##22	SLC10A3 (ENSPCIG00000027130)	ENSPCIG00000027128	ENSPCIG00000036040	ENSPCIG00000036166	ENSPCIG00000027040	GDI1 (ENSPCIG00000026947)	ENSPCIG00000026944	TAFAZZIN (ENSPCIG00000026941)	ENSPCIG00000026938	ENSPCIG00000026928	ENSPCIG00000026917	ENSPCIG00000026904	FLNA (ENSPCIG00000026358)	ENSPCIG00000010081	ENSPCIG00000022816
Wallaby	MODERN SPECIES	8413																FAM3A (ENSMEUG00000011040) ##22
Tasmanian devil	MODERN SPECIES	21	ENSSHAG00000002823	ENSSHAG00000000499	ENSSHAG00000005392	ENSSHAG00000031991	FUNDC2 (ENSSHAG00000004767)	ENSSHAG00000000596	MPP1 (ENSSHAG00000003104)	ENSSHAG00000002463	ENSSHAG00000000766	GAB3 (ENSSHAG00000005588)	ENSSHAG00000005407	ENSSHAG00000004769	ENSSHAG00000004297	IKBKG (ENSSHAG00000003200)	G6PD (ENSSHAG00000002307)	FAM3A (ENSSHAG00000021982) ##22	SLC10A3 (ENSSHAG00000027798)	ENSSHAG00000032311	PLXNA3 (ENSSHAG00000006328)	ENSSHAG00000005773	GDI1 (ENSSHAG00000023206)	ENSSHAG00000005317	ENSSHAG00000030741	ENSSHAG00000001595	ENSSHAG00000004015	ENSSHAG00000022273	ENSSHAG00000001055	ENSSHAG00000003040	ENSSHAG00000024989	ENSSHAG00000001750	ENSSHAG00000024707
Opossum	MODERN SPECIES	627	FAAH2 (ENSMODG00000006103)	ENSMODG00000048424	ENSMODG00000009313	ENSMODG00000050119	MPP1 (ENSMODG00000009267)	DKC1 (ENSMODG00000009243)	ENSMODG00000048987	GAB3 (ENSMODG00000009236)	ENSMODG00000009225	ENSMODG00000009214	ENSMODG00000009196	ENSMODG00000039236	IKBKG (ENSMODG00000009175)	G6PD (ENSMODG00000009154)	ENSMODG00000009130	FAM3A (ENSMODG00000009016) ##22	SLC10A3 (ENSMODG00000009006)	ENSMODG00000008997	PLXNA3 (ENSMODG00000008980)	GDI1 (ENSMODG00000008798)	ENSMODG00000008869	TAFAZZIN (ENSMODG00000008851)	ENSMODG00000008763	ENSMODG00000008752	ENSMODG00000008731	FLNA (ENSMODG00000008710)	ENSMODG00000025437
Eutheria	ANCESTRAL SPECIES	16	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00390000016992	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.i.a	ENSGT01100000263574.b.i.b	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00390000000360.r	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154783.e.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT00950000183068.a.a	ENSGT00390000000360.r	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b ##22
Common shrew	MODERN SPECIES	5077																FAM3A (ENSSARG00000001377) ##22
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00950000183068.a.a	ENSGT00390000000360.r.d	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT01030000235238	ENSGT00410000025802.g.b	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Suina	ANCESTRAL SPECIES	7	ENSGT00390000016992	ENSGT00940000158132	ENSGT00390000018904	ENSGT00950000183068.a.a	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.f	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Pig	MODERN SPECIES	300	ENSSSCG00000012812	BRCC3 (ENSSSCG00000012813)	MTCP1 (ENSSSCG00000012816)	CMC4 (ENSSSCG00000062015)	FUNDC2 (ENSSSCG00000012817)	ENSSSCG00000054901	ENSSSCG00000057758	SMIM9 (ENSSSCG00000055917)	F8 (ENSSSCG00000012822)	DKC1 (ENSSSCG00000012823)	GAB3 (ENSSSCG00000012824)	ENSSSCG00000049540	ENSSSCG00000012827	IKBKG (ENSSSCG00000012825)	G6PD (ENSSSCG00000025108)	FAM3A (ENSSSCG00000028934) ##22	SLC10A3 (ENSSSCG00000025766)	ENSSSCG00000057536	ENSSSCG00000032959	PLXNA3 (ENSSSCG00000023483)	FAM50A (ENSSSCG00000025303)	GDI1 (ENSSSCG00000030421)	ATP6AP1 (ENSSSCG00000037310)	TAFAZZIN (ENSSSCG00000039655)	DNASE1L1 (ENSSSCG00000037032)	RPL10 (ENSSSCG00000035997)	FLNA (ENSSSCG00000033299)	EMD (ENSSSCG00000037777)	TKTL1 (ENSSSCG00000029443)	TEX28 (ENSSSCG00000029513)	ENSSSCG00000029523
Chacoan peccary	MODERN SPECIES	44	MTCP1 (ENSCWAG00000000545)	CMC4 (ENSCWAG00000000535)	FUNDC2 (ENSCWAG00000000516)	ENSCWAG00000000499	ENSCWAG00000000488	ENSCWAG00000000473	SMIM9 (ENSCWAG00000000458)	MPP1 (ENSCWAG00000000412)	DKC1 (ENSCWAG00000000314)	GAB3 (ENSCWAG00000000272)	ENSCWAG00000000236	ENSCWAG00000000223	ENSCWAG00000000203	IKBKG (ENSCWAG00000000145)	G6PD (ENSCWAG00000000077)	FAM3A (ENSCWAG00000000031) ##22	SLC10A3 (ENSCWAG00000000012)	UBL4A (ENSCWAG00000000008)	ENSCWAG00000021354	ENSCWAG00000021347	PLXNA3 (ENSCWAG00000021299)	FAM50A (ENSCWAG00000021283)	GDI1 (ENSCWAG00000021263)	ATP6AP1 (ENSCWAG00000021247)	TAFAZZIN (ENSCWAG00000021221)	DNASE1L1 (ENSCWAG00000021201)	ENSCWAG00000021182
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT01030000235238	ENSGT00410000025802.g.b	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Camelidae	ANCESTRAL SPECIES	80														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b	ENSGT00910000146917	ENSGT00940000160502
Arabian camel	MODERN SPECIES	204	MTCP1 (ENSCDRG00005017604)	CMC4 (ENSCDRG00005017574)	ENSCDRG00005017538	F8 (ENSCDRG00005017422)	SMIM9 (ENSCDRG00005017392)	MPP1 (ENSCDRG00005017184)	DKC1 (ENSCDRG00005017117)	ENSCDRG00005017097	GAB3 (ENSCDRG00005016636)	ENSCDRG00005016586	ENSCDRG00005016563	ENSCDRG00005016521	ENSCDRG00005016489	IKBKG (ENSCDRG00005016363)	G6PD (ENSCDRG00005016281)	FAM3A (ENSCDRG00005016065) ##22	SLC10A3 (ENSCDRG00005016014)	LAGE3 (ENSCDRG00005015984)	FAM50A (ENSCDRG00005012822)	GDI1 (ENSCDRG00005012702)	ATP6AP1 (ENSCDRG00005012618)	TAZ (ENSCDRG00005012375)	DNASE1L1 (ENSCDRG00005012179)	ENSCDRG00005012077	ENSCDRG00005011914	FLNA (ENSCDRG00005011684)	TKTL1 (ENSCDRG00005011584)	TEX28 (ENSCDRG00005011542)	ENSCDRG00005011483	MECP2 (ENSCDRG00005011374)	ENSCDRG00005011350
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01030000235238	ENSGT00410000025802.g.b	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Cetacea	ANCESTRAL SPECIES	19	ENSGT00390000000360.r.d	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f.d.a	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A.n	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00390000000360.r.d	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f.d.a	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A.m	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00390000000360.r.d	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f.d.a	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A.m	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034.i	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00390000000360.r.d	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f.d.a	ENSGT00390000016992.x	ENSGT00940000163020.y	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A.m	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034.i	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00950000183068.a.a	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f.d.a	ENSGT00390000016992.w	ENSGT00940000163020.z	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A.m	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034.i	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b
Narwhal	MODERN SPECIES	309														IKBKG (ENSMMNG00015013582)	G6PD (ENSMMNG00015013556)	FAM3A (ENSMMNG00015013509) ##22	SLC10A3 (ENSMMNG00015013481)	UBL4A (ENSMMNG00015013467)	LAGE3 (ENSMMNG00015013456)	PLXNA3 (ENSMMNG00015013425)	ENSMMNG00015013390	GDI1 (ENSMMNG00015013359)	ATP6AP1 (ENSMMNG00015013337)	ENSMMNG00015013329	ENSMMNG00015013313	DNASE1L1 (ENSMMNG00015013295)	ENSMMNG00015013277	ENSMMNG00015013213	FLNA (ENSMMNG00015013139)	TKTL1 (ENSMMNG00015013076)	ENSMMNG00015013056
Beluga whale	MODERN SPECIES	139	ENSDLEG00000012046	BRCC3 (ENSDLEG00000012025)	MTCP1 (ENSDLEG00000012008)	CMC4 (ENSDLEG00000011999)	FUNDC2 (ENSDLEG00000011985)	ENSDLEG00000011977	ENSDLEG00000011965	F8 (ENSDLEG00000011690)	MPP1 (ENSDLEG00000011647)	DKC1 (ENSDLEG00000011603)	GAB3 (ENSDLEG00000011559)	ENSDLEG00000011545	ENSDLEG00000011523	IKBKG (ENSDLEG00000011500)	G6PD (ENSDLEG00000011468)	FAM3A (ENSDLEG00000011447) ##22	UBL4A (ENSDLEG00000011413)	LAGE3 (ENSDLEG00000011398)	PLXNA3 (ENSDLEG00000011331)	FAM50A (ENSDLEG00000011270)	GDI1 (ENSDLEG00000011245)	ATP6AP1 (ENSDLEG00000011212)	TAZ (ENSDLEG00000011183)	DNASE1L1 (ENSDLEG00000011154)	ENSDLEG00000011125	EMD (ENSDLEG00000011102)	FLNA (ENSDLEG00000010999)	TKTL1 (ENSDLEG00000010974)	ENSDLEG00000010916	MECP2 (ENSDLEG00000010908)	IRAK1 (ENSDLEG00000010892)
Vaquita	MODERN SPECIES	34	CMC4 (ENSPSNG00000013473)	MTCP1 (ENSPSNG00000022484)	ENSPSNG00000022480	ENSPSNG00000022476	ENSPSNG00000022473	F8 (ENSPSNG00000022465)	SMIM9 (ENSPSNG00000022452)	MPP1 (ENSPSNG00000022439)	DKC1 (ENSPSNG00000022426)	GAB3 (ENSPSNG00000022421)	ENSPSNG00000022416	ENSPSNG00000022414	ENSPSNG00000022407	IKBKG (ENSPSNG00000022395)	G6PD (ENSPSNG00000022382)	FAM3A (ENSPSNG00000022374) ##22	SLC10A3 (ENSPSNG00000022364)	ENSPSNG00000022354	PLXNA3 (ENSPSNG00000022341)	ENSPSNG00000022331	GDI1 (ENSPSNG00000022323)	ATP6AP1 (ENSPSNG00000022314)	TAFAZZIN (ENSPSNG00000022306)	DNASE1L1 (ENSPSNG00000022297)	ENSPSNG00000022280	ENSPSNG00000022266	FLNA (ENSPSNG00000022089)	TKTL1 (ENSPSNG00000021994)	ENSPSNG00000021965	ENSPSNG00000021951	ENSPSNG00000021942
Blue whale	MODERN SPECIES	40	BRCC3 (ENSBMSG00010021621)	MTCP1 (ENSBMSG00010021613)	CMC4 (ENSBMSG00010021610)	ENSBMSG00010021604	ENSBMSG00010021592	ENSBMSG00010021588	F8 (ENSBMSG00010021526)	SMIM9 (ENSBMSG00010021513)	MPP1 (ENSBMSG00010021484)	DKC1 (ENSBMSG00010021430)	ENSBMSG00010021407	ENSBMSG00010021382	ENSBMSG00010021370	IKBKG (ENSBMSG00010021344)	G6PD (ENSBMSG00010021326)	FAM3A (ENSBMSG00010021308) ##22	SLC10A3 (ENSBMSG00010021301)	UBL4A (ENSBMSG00010021291)	LAGE3 (ENSBMSG00010021278)	PLXNA3 (ENSBMSG00010021267)	ENSBMSG00010021250	GDI1 (ENSBMSG00010021239)	ATP6AP1 (ENSBMSG00010021220)	TAFAZZIN (ENSBMSG00010021182)	DNASE1L1 (ENSBMSG00010021173)	ENSBMSG00010021148	ENSBMSG00010021119	ENSBMSG00010021096	EMD (ENSBMSG00010021072)	FLNA (ENSBMSG00010020850)	ENSBMSG00010020592
Pecora	ANCESTRAL SPECIES	38														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843
Yarkand deer	MODERN SPECIES	1323	PDZD4 (ENSCHYG00000026107)	L1CAM (ENSCHYG00000025877)	AVPR2 (ENSCHYG00000025838)	ARHGAP4 (ENSCHYG00000025566)	ENSCHYG00000025281	RENBP (ENSCHYG00000025248)	HCFC1 (ENSCHYG00000025112)	IRAK1 (ENSCHYG00000024907)	MECP2 (ENSCHYG00000024843)	ENSCHYG00000024807	TEX28 (ENSCHYG00000024783)	TKTL1 (ENSCHYG00000024748)	EMD (ENSCHYG00000024666)	IKBKG (ENSCHYG00000024518)	G6PD (ENSCHYG00000024413)	ENSCHYG00000024202 ##22	LAGE3 (ENSCHYG00000024139)	PLXNA3 (ENSCHYG00000023890)	GDI1 (ENSCHYG00000023645)	ATP6AP1 (ENSCHYG00000023535)	TAFAZZIN (ENSCHYG00000022770)	DNASE1L1 (ENSCHYG00000022608)	ENSCHYG00000022474	FLNA (ENSCHYG00000021422)	ENSCHYG00000021292	ENSCHYG00000021269	ENSCHYG00000021240	ENSCHYG00000021194	ENSCHYG00000021132	GAB3 (ENSCHYG00000020865)	DKC1 (ENSCHYG00000020555)
Percora_a	ANCESTRAL SPECIES	35														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843
Siberian musk deer	MODERN SPECIES	14													ENSMMSG00000013493	IKBKG (ENSMMSG00000013522)	G6PD (ENSMMSG00000013593)	ENSMMSG00000013656 ##22	SLC10A3 (ENSMMSG00000013825)	UBL4A (ENSMMSG00000013839)	LAGE3 (ENSMMSG00000013858)	PLXNA3 (ENSMMSG00000013876)	ENSMMSG00000013933	GDI1 (ENSMMSG00000013993)	ATP6AP1 (ENSMMSG00000014033)	TAFAZZIN (ENSMMSG00000014064)	ENSMMSG00000014152	ENSMMSG00000014213	EMD (ENSMMSG00000014247)	FLNA (ENSMMSG00000014357)	TKTL1 (ENSMMSG00000015211)	TEX28 (ENSMMSG00000015249)	ENSMMSG00000015261
Bovidae	ANCESTRAL SPECIES	33											ENSGT00960000186859	ENSGT00410000025802.g.b	ENSGT01030000235238.f	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Caprinae	ANCESTRAL SPECIES	45														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.a.a	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Goat	MODERN SPECIES	104													ENSCHIG00000016614	IKBKG (ENSCHIG00000023525)	G6PD (ENSCHIG00000015034)	FAM3A (ENSCHIG00000011233) ##22	UBL4A (ENSCHIG00000023962)
Bovinae	ANCESTRAL SPECIES	46												ENSGT00960000186859	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Bos	ANCESTRAL SPECIES	36	ENSGT00940000159162	ENSGT00940000154837.f.b.d.a	ENSGT00940000164266	ENSGT00940000157822	ENSGT00940000154837.f.b.d.b	ENSGT00940000159951.d.b.b.a.c.b	ENSGT00730000111097.e	ENSGT00940000158335	ENSGT00940000163888	ENSGT00940000162668	ENSGT00960000186859	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT01100000263481.n.a.b.b.a.a.b.b	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Bos_b	ANCESTRAL SPECIES	31	ENSGT00940000163888	ENSGT00940000162668	ENSGT00960000192909	ENSGT00940000161825.v.a.a.a	ENSGT00390000012182.i.a.b	ENSGT00390000012182.i.a.a.b	ENSGT00940000161825.v.a.b	ENSGT00910000144363.g.a.a.a.a.a.a.a	ENSGT00910000144363.g.a.a.a.a.b	ENSGT00960000186859	ENSGT00410000025802.g.b	ENSGT00940000160561.d.b	ENSGT00530000063808.a	ENSGT01100000263481.n.a.b.b.a.a.b.b	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Cow	MODERN SPECIES	177	ENSBTAG00000033445	ENSBTAG00000049844	ENSBTAG00000036343	ENSBTAG00000049678	ENSBTAG00000048281	ENSBTAG00000054052	ENSBTAG00000049584	ENSBTAG00000052652	ENSBTAG00000053848	ENSBTAG00000055292	ENSBTAG00000048914	ENSBTAG00000001900	IKBKG (ENSBTAG00000006268)	ENSBTAG00000053534	G6PD (ENSBTAG00000019512)	FAM3A (ENSBTAG00000012747) ##22	SLC10A3 (ENSBTAG00000014333)	UBL4A (ENSBTAG00000014331)	LAGE3 (ENSBTAG00000054868)	PLXNA3 (ENSBTAG00000008552)	FAM50A (ENSBTAG00000033032)	GDI1 (ENSBTAG00000012125)	ATP6AP1 (ENSBTAG00000012117)	TAFAZZIN (ENSBTAG00000007456)	DNASE1L1 (ENSBTAG00000007455)	RPL10 (ENSBTAG00000007454)	EMD (ENSBTAG00000022314)	FLNA (ENSBTAG00000011190)	TKTL1 (ENSBTAG00000020127)	TEX28 (ENSBTAG00000020300)	OPN1LW (ENSBTAG00000020299)
American bison	MODERN SPECIES	2143																ENSBBBG00000020974 ##22
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT00410000025802.h	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00950000183068.a.a	ENSGT00390000000360.r.d	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b
Equus	ANCESTRAL SPECIES	52	ENSGT00940000158132	ENSGT00390000018904	ENSGT00390000000360.r.d	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b.m	ENSGT00410000025802.g.b.n	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Donkey	MODERN SPECIES	36	ENSEASG00005034088	ENSEASG00005004499	ENSEASG00005033689	SMIM9 (ENSEASG00005025831)	MPP1 (ENSEASG00005007482)	ENSEASG00005007484	ENSEASG00005033034	ENSEASG00005032503	ENSEASG00005034297	ENSEASG00005028284	ENSEASG00005031374	ENSEASG00005027434	ENSEASG00005032016	ENSEASG00005032513	G6PD (ENSEASG00005018430)	FAM3A (ENSEASG00005018431) ##22	SLC10A3 (ENSEASG00005018434)	UBL4A (ENSEASG00005018436)	PLXNA3 (ENSEASG00005018440)	FAM50A (ENSEASG00005018449)	GDI1 (ENSEASG00005018454)	ATP6AP1 (ENSEASG00005034458)	TAFAZZIN (ENSEASG00005025100)	DNASE1L1 (ENSEASG00005028299)	ENSEASG00005025120	EMD (ENSEASG00005019177)	FLNA (ENSEASG00005018577)	TKTL1 (ENSEASG00005019179)	TEX28 (ENSEASG00005019182)	ENSEASG00005019183	MECP2 (ENSEASG00005019188)
Horse	MODERN SPECIES	480	FUNDC2 (ENSECAG00000026822)	ENSECAG00000058802	ENSECAG00000029708	ENSECAG00000054244	ENSECAG00000033114	F8 (ENSECAG00000015044)	MPP1 (ENSECAG00000009595)	DKC1 (ENSECAG00000023524)	GAB3 (ENSECAG00000023348)	ENSECAG00000031652	ENSECAG00000056189	ENSECAG00000029643	ENSECAG00000033189	IKBKG (ENSECAG00000020595)	G6PD (ENSECAG00000014994)	FAM3A (ENSECAG00000013840) ##22	SLC10A3 (ENSECAG00000013796)	UBL4A (ENSECAG00000013506)	LAGE3 (ENSECAG00000038130)	PLXNA3 (ENSECAG00000025088)	FAM50A (ENSECAG00000023594)	GDI1 (ENSECAG00000017687)	ATP6AP1 (ENSECAG00000014216)	TAFAZZIN (ENSECAG00000010872)	DNASE1L1 (ENSECAG00000003758)	RPL10 (ENSECAG00000017154)	FLNA (ENSECAG00000009550)	EMD (ENSECAG00000013908)	TKTL1 (ENSECAG00000021992)	TEX28 (ENSECAG00000021904)	OPN1LW (ENSECAG00000018684)
Chiroptera	ANCESTRAL SPECIES	48	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT01030000238159	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.a	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Megabat	MODERN SPECIES	498														IKBKG (ENSPVAG00000007488)	G6PD (ENSPVAG00000007487)	FAM3A (ENSPVAG00000007486) ##22	ENSPVAG00000007485	LAGE3 (ENSPVAG00000007484)	PLXNA3 (ENSPVAG00000007481)
Microchiroptera	ANCESTRAL SPECIES	45	ENSGT00390000000360.r.d	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT01030000238159	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.a	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Microbat	MODERN SPECIES	977													ENSMLUG00000025335	IKBKG (ENSMLUG00000027075)	G6PD (ENSMLUG00000008210)	FAM3A (ENSMLUG00000005226) ##22	SLC10A3 (ENSMLUG00000008199)	UBL4A (ENSMLUG00000027145)	ENSMLUG00000030030	PLXNA3 (ENSMLUG00000010006)	GDI1 (ENSMLUG00000003501)	ENSMLUG00000022234	ATP6AP1 (ENSMLUG00000003493)	TAFAZZIN (ENSMLUG00000024037)	DNASE1L1 (ENSMLUG00000014342)	ENSMLUG00000014337	FLNA (ENSMLUG00000014316)	EMD (ENSMLUG00000005200)	TKTL1 (ENSMLUG00000014306)	TEX28 (ENSMLUG00000014304)	ENSMLUG00000014299
Greater horseshoe bat	MODERN SPECIES		FUNDC2 (ENSRFEG00010002186)	F8 (ENSRFEG00010002258)	ENSRFEG00010002358	ENSRFEG00010002379	SMIM9 (ENSRFEG00010002415)	MPP1 (ENSRFEG00010002502)	DKC1 (ENSRFEG00010002621)	GAB3 (ENSRFEG00010002752)	ENSRFEG00010002860	ENSRFEG00010002889	ENSRFEG00010002921	ENSRFEG00010002963	ENSRFEG00010002995	IKBKG (ENSRFEG00010003030)	G6PD (ENSRFEG00010003111)	FAM3A (ENSRFEG00010003196) ##22	SLC10A3 (ENSRFEG00010003285)	UBL4A (ENSRFEG00010003315)	LAGE3 (ENSRFEG00010003340)	PLXNA3 (ENSRFEG00010003374)	FAM50A (ENSRFEG00010003417)	GDI1 (ENSRFEG00010003480)	ATP6AP1 (ENSRFEG00010003617)	TAZ (ENSRFEG00010003720)	BT_m006_jsm59FD5r (ENSRFEG00010003791)	RPL10 (ENSRFEG00010003909)	EMD (ENSRFEG00010004008)	FLNA (ENSRFEG00010004101)	TKTL1 (ENSRFEG00010004159)	TEX28 (ENSRFEG00010004212)	ENSRFEG00010004230
Carnivora	ANCESTRAL SPECIES	11	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Felidae	ANCESTRAL SPECIES	29	ENSGT00390000018904	ENSGT00950000183068.a.a	ENSGT00390000000360.r.d	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744.m	ENSGT00510000047092	ENSGT00940000159803	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Panthera	ANCESTRAL SPECIES	65														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b
Tiger	MODERN SPECIES	543															IKBKG (ENSPTIG00000015072)	FAM3A (ENSPTIG00000015024) ##22	UBL4A (ENSPTIG00000014994)	ENSPTIG00000014989
Panthera_a	ANCESTRAL SPECIES	76														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b
lion	MODERN SPECIES	113														IKBKG (ENSPLOG00000008081)	G6PD (ENSPLOG00000008022)	FAM3A (ENSPLOG00000007925) ##22	SLC10A3 (ENSPLOG00000007885)	LAGE3 (ENSPLOG00000007855)	PLXNA3 (ENSPLOG00000007506)	FAM50A (ENSPLOG00000007410)	GDI1 (ENSPLOG00000007386)	ATP6AP1 (ENSPLOG00000007351)	ENSPLOG00000007302	DNASE1L1 (ENSPLOG00000007262)	ENSPLOG00000007204
leopard	MODERN SPECIES	303														IKBKG (ENSPPRG00000017843)	G6PD (ENSPPRG00000018173)	FAM3A (ENSPPRG00000018526) ##22	SLC10A3 (ENSPPRG00000018639)	ENSPPRG00000019153	FAM50A (ENSPPRG00000020113)	GDI1 (ENSPPRG00000020392)	ATP6AP1 (ENSPPRG00000020575)	TAFAZZIN (ENSPPRG00000020887)	DNASE1L1 (ENSPPRG00000021313)	ENSPPRG00000021464
Cat	MODERN SPECIES	252	VBP1 (ENSFCAG00000022037)	ENSFCAG00000027511	BRCC3 (ENSFCAG00000019258)	MTCP1 (ENSFCAG00000029629)	CMC4 (ENSFCAG00000023645)	FUNDC2 (ENSFCAG00000031335)	ENSFCAG00000045185	F8 (ENSFCAG00000048336)	SMIM9 (ENSFCAG00000040693)	MPP1 (ENSFCAG00000006578)	DKC1 (ENSFCAG00000006577)	GAB3 (ENSFCAG00000006576)	ENSFCAG00000048808	IKBKG (ENSFCAG00000029840)	G6PD (ENSFCAG00000043880)	FAM3A (ENSFCAG00000035237) ##22	SLC10A3 (ENSFCAG00000022989)	UBL4A (ENSFCAG00000025607)	LAGE3 (ENSFCAG00000038204)	PLXNA3 (ENSFCAG00000011400)	FAM50A (ENSFCAG00000011399)	GDI1 (ENSFCAG00000011398)	ATP6AP1 (ENSFCAG00000011397)	TAFAZZIN (ENSFCAG00000023652)	DNASE1L1 (ENSFCAG00000011396)	ENSFCAG00000011395	EMD (ENSFCAG00000011394)	FLNA (ENSFCAG00000011393)	TKTL1 (ENSFCAG00000011392)	TEX28 (ENSFCAG00000044525)	OPN1LW (ENSFCAG00000011390)
Caniformia	ANCESTRAL SPECIES	22	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000016992	ENSGT00940000163020	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT00950000183068.a.a	ENSGT00390000000360.r.d	ENSGT00390000012647	ENSGT00390000000360.r.c.b	ENSGT00390000006885.a	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT01030000235238.c	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.h	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Ursidae	ANCESTRAL SPECIES	45	ENSGT00390000018904	ENSGT00950000183068.a.a	ENSGT00390000000360.r.d	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00390000013102.f	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744.p	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.h	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b.b
Giant Panda	MODERN SPECIES	2288	BRCC3 (ENSAMEG00000011969)	MTCP1 (ENSAMEG00000028878)	CMC4 (ENSAMEG00000011961)	ENSAMEG00000024837	FUNDC2 (ENSAMEG00000011956)	ENSAMEG00000028778	F8 (ENSAMEG00000002491)	SMIM9 (ENSAMEG00000028154)	MPP1 (ENSAMEG00000002802)	DKC1 (ENSAMEG00000002776)	GAB3 (ENSAMEG00000001366)	ENSAMEG00000019282	ENSAMEG00000019272	IKBKG (ENSAMEG00000000410)	G6PD (ENSAMEG00000000366)	FAM3A (ENSAMEG00000000362) ##22	SLC10A3 (ENSAMEG00000000359)	UBL4A (ENSAMEG00000026286)	ENSAMEG00000026988	PLXNA3 (ENSAMEG00000000281)	FAM50A (ENSAMEG00000000273)	GDI1 (ENSAMEG00000000265)	ATP6AP1 (ENSAMEG00000000239)	ENSAMEG00000000230	ENSAMEG00000000229	RPL10 (ENSAMEG00000000227)	ENSAMEG00000030923	ENSAMEG00000007261	ENSAMEG00000007222	ENSAMEG00000018441	TEX28 (ENSAMEG00000018444)
Ursus	ANCESTRAL SPECIES	220													ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b
Polar bear	MODERN SPECIES	330												ENSUMAG00000019262	ENSUMAG00000019269	IKBKG (ENSUMAG00000019273)	G6PD (ENSUMAG00000019300)	FAM3A (ENSUMAG00000019452) ##22	SLC10A3 (ENSUMAG00000019457)	FAM50A (ENSUMAG00000019470)	GDI1 (ENSUMAG00000019473)	ATP6AP1 (ENSUMAG00000019476)	ENSUMAG00000019531	DNASE1L1 (ENSUMAG00000019505)	ENSUMAG00000019583	FLNA (ENSUMAG00000019645)	EMD (ENSUMAG00000020684)	TKTL1 (ENSUMAG00000020693)	TEX28 (ENSUMAG00000020707)	ENSUMAG00000020714	ENSUMAG00000020747	TMEM187 (ENSUMAG00000020759)	ENSUMAG00000020761
American black bear	MODERN SPECIES	2664													ENSUAMG00000011482	IKBKG (ENSUAMG00000011490)	G6PD (ENSUAMG00000011515)	FAM3A (ENSUAMG00000011527) ##22	SLC10A3 (ENSUAMG00000011529)	UBL4A (ENSUAMG00000011531)	PLXNA3 (ENSUAMG00000011554)	GDI1 (ENSUAMG00000011657)
Mustelinae	ANCESTRAL SPECIES	108													ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b
American mink	MODERN SPECIES	691											ENSNVIG00000014890	ENSNVIG00000014922	ENSNVIG00000014931	IKBKG (ENSNVIG00000014940)	G6PD (ENSNVIG00000015003)	FAM3A (ENSNVIG00000015078) ##22	UBL4A (ENSNVIG00000015105)
Ferret	MODERN SPECIES	531												ENSMPUG00000019515	ENSMPUG00000009840	IKBKG (ENSMPUG00000009835)	G6PD (ENSMPUG00000009722)	FAM3A (ENSMPUG00000009671) ##22	SLC10A3 (ENSMPUG00000019511)	UBL4A (ENSMPUG00000009650)	PLXNA3 (ENSMPUG00000009629)	ENSMPUG00000009476	GDI1 (ENSMPUG00000009461)	ATP6AP1 (ENSMPUG00000009450)	TAFAZZIN (ENSMPUG00000009363)	DNASE1L1 (ENSMPUG00000009354)	ENSMPUG00000009320	FLNA (ENSMPUG00000009293)	EMD (ENSMPUG00000009232)	ENSMPUG00000019510	TKTL1 (ENSMPUG00000009214)	TEX28 (ENSMPUG00000009202)	ENSMPUG00000009081
Canidae	ANCESTRAL SPECIES	50	ENSGT00390000000360.r.d	ENSGT00390000006885.a	ENSGT00390000012647.a	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000158744	ENSGT00510000047092.a	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT00410000025802.h	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Red fox	MODERN SPECIES	263														IKBKG (ENSVVUG00000029536)	G6PD (ENSVVUG00000029537)	FAM3A (ENSVVUG00000029538) ##22	SLC10A3 (ENSVVUG00000029540)	PLXNA3 (ENSVVUG00000029541)	ENSVVUG00000029545	GDI1 (ENSVVUG00000029546)	ATP6AP1 (ENSVVUG00000029548)	TAZ (ENSVVUG00000029551)	DNASE1L1 (ENSVVUG00000029556)	RPL10 (ENSVVUG00000029559)	FLNA (ENSVVUG00000029569)	EMD (ENSVVUG00000029577)	TEX28 (ENSVVUG00000029579)	TKTL1 (ENSVVUG00000029580)	ENSVVUG00000029585	MECP2 (ENSVVUG00000029591)	IRAK1 (ENSVVUG00000029594)
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT00390000000360.r.c.a	ENSGT00390000012647.a	ENSGT00390000006885.a	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000016992.m	ENSGT00940000163020	ENSGT00940000158744	ENSGT00510000047092.a	ENSGT00940000159803	ENSGT00410000025802.g.b.k	ENSGT00410000025802.h	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.h	ENSGT00410000025802.g.a.g	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843
Dingo	MODERN SPECIES	383	MTCP1 (ENSCAFG00020008697)	FUNDC2 (ENSCAFG00020008699)	F8 (ENSCAFG00020008704)	ENSCAFG00020008736	ENSCAFG00020008739	MPP1 (ENSCAFG00020008744)	ENSCAFG00020008918	ENSCAFG00020008942	ENSCAFG00020008959	ENSCAFG00020008968	ENSCAFG00020008976	ENSCAFG00020008985	ENSCAFG00020008988	IKBKG (ENSCAFG00020008992)	G6PD (ENSCAFG00020008999)	FAM3A (ENSCAFG00020009021) ##22	SLC10A3 (ENSCAFG00020009027)	UBL4A (ENSCAFG00020009032)	ENSCAFG00020009037	PLXNA3 (ENSCAFG00020009040)	FAM50A (ENSCAFG00020009064)	GDI1 (ENSCAFG00020009070)	ATP6AP1 (ENSCAFG00020009077)	TAFAZZIN (ENSCAFG00020009089)	DNASE1L1 (ENSCAFG00020009104)	ENSCAFG00020009114	FLNA (ENSCAFG00020009434)	EMD (ENSCAFG00020022046)	TKTL1 (ENSCAFG00020022053)	ENSCAFG00020022055	TEX28 (ENSCAFG00020022059)
Dog	MODERN SPECIES	144	MTCP1 (ENSCAFG00845030350)	CMC4 (ENSCAFG00845030338)	FUNDC2 (ENSCAFG00845030300)	ENSCAFG00845030278	ENSCAFG00845030269	F8 (ENSCAFG00845030098)	MPP1 (ENSCAFG00845029936)	DKC1 (ENSCAFG00845029852)	ENSCAFG00845029817	LAGE3 (ENSCAFG00845029708)	ENSCAFG00845029697	ENSCAFG00845029686	cOR7R1 (ENSCAFG00845029673)	IKBKG (ENSCAFG00845029634)	G6PD (ENSCAFG00845029388)	ENSCAFG00845029578 ##22	SLC10A3 (ENSCAFG00845029316)	UBL4A (ENSCAFG00845029287)	ENSCAFG00845029273	PLXNA3 (ENSCAFG00845029121)	FAM50A (ENSCAFG00845029041)	ATP6AP1 (ENSCAFG00845029004)	GDI1 (ENSCAFG00845028921)	TAZ (ENSCAFG00845028739)	DNASE1L1 (ENSCAFG00845028675)	RPL10 (ENSCAFG00845028627)	FLNA (ENSCAFG00845027901)	EMD (ENSCAFG00845027618)	TKTL1 (ENSCAFG00845027442)	TEX28 (ENSCAFG00845027400)	OPN1LW (ENSCAFG00845027363)
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154783.e.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT01050000244815.B.a.a	ENSGT01030000238159	ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Primates	ANCESTRAL SPECIES	23	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154783.e.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Strepsirrhini	ANCESTRAL SPECIES	45														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Bushbaby	MODERN SPECIES	364											ENSOGAG00000032447	ENSOGAG00000027129	ENSOGAG00000031211	IKBKG (ENSOGAG00000024983)	G6PD (ENSOGAG00000033296)	FAM3A (ENSOGAG00000016669) ##22	SLC10A3 (ENSOGAG00000002637)	UBL4A (ENSOGAG00000030091)	PLXNA3 (ENSOGAG00000008330)	FAM50A (ENSOGAG00000008322)	GDI1 (ENSOGAG00000008317)	ATP6AP1 (ENSOGAG00000008310)	TAFAZZIN (ENSOGAG00000008304)	DNASE1L1 (ENSOGAG00000000100)	ENSOGAG00000000099	EMD (ENSOGAG00000029264)	FLNA (ENSOGAG00000015265)	ENSOGAG00000017264	ENSOGAG00000027452	TKTL1 (ENSOGAG00000000901)	TEX28 (ENSOGAG00000000900)
Lemuriformes	ANCESTRAL SPECIES	60														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Mouse lemur	MODERN SPECIES	169	ENSMICG00000033041	F9 (ENSMICG00000016427)	MCF2 (ENSMICG00000016443)	ENSMICG00000037295	ATP11C (ENSMICG00000017620)	CXorf66 (ENSMICG00000042583)	ENSMICG00000043090	ENSMICG00000044078	ENSMICG00000043299	ENSMICG00000045052	ENSMICG00000028378	ENSMICG00000041505	ENSMICG00000031449	IKBKG (ENSMICG00000035937)	G6PD (ENSMICG00000016481)	FAM3A (ENSMICG00000016470) ##22	SLC10A3 (ENSMICG00000016468)	UBL4A (ENSMICG00000016459)	PLXNA3 (ENSMICG00000016439)	FAM50A (ENSMICG00000016428)	GDI1 (ENSMICG00000016418)	ATP6AP1 (ENSMICG00000016405)	TAFAZZIN (ENSMICG00000030766)	DNASE1L1 (ENSMICG00000035242)	ENSMICG00000033705	EMD (ENSMICG00000004682)	FLNA (ENSMICG00000004663)	GAB3 (ENSMICG00000000264)	ENSMICG00000002818	MPP1 (ENSMICG00000002828)	SMIM9 (ENSMICG00000043321)
Lemuriformes_a	ANCESTRAL SPECIES	110														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Greater bamboo lemur	MODERN SPECIES	1160														IKBKG (ENSPSMG00000000861)	G6PD (ENSPSMG00000000786)	FAM3A (ENSPSMG00000000661) ##22	UBL4A (ENSPSMG00000000561)	LAGE3 (ENSPSMG00000000544)	ENSPSMG00000000535	ENSPSMG00000000524	FAM50A (ENSPSMG00000000520)
Coquerels sifaka	MODERN SPECIES	882														IKBKG (ENSPCOG00000026138)	G6PD (ENSPCOG00000028512)	FAM3A (ENSPCOG00000016869) ##22	SLC10A3 (ENSPCOG00000025772)	UBL4A (ENSPCOG00000022735)	LAGE3 (ENSPCOG00000027993)	PLXNA3 (ENSPCOG00000015843)	ENSPCOG00000024061	GDI1 (ENSPCOG00000015358)	ATP6AP1 (ENSPCOG00000015508)	TAFAZZIN (ENSPCOG00000023186)	DNASE1L1 (ENSPCOG00000022635)	ENSPCOG00000027122	EMD (ENSPCOG00000015697)	FLNA (ENSPCOG00000011059)	TKTL1 (ENSPCOG00000023105)	ENSPCOG00000015866	MECP2 (ENSPCOG00000024848)
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00940000154783.e.b	ENSGT00510000047733	ENSGT00950000183055.a.b	ENSGT00530000063582.a	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Tarsier	MODERN SPECIES	843																FAM3A (ENSTSYG00000025401) ##22	UBL4A (ENSTSYG00000032767)	SLC10A3 (ENSTSYG00000000676)	LAGE3 (ENSTSYG00000028660)
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00950000183068.a.a	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.b	ENSGT00410000025802.h.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00940000158132	ENSGT00390000018904	ENSGT00950000183068.a.a	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647.g	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b.n	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426.a	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Cebidae	ANCESTRAL SPECIES	27	ENSGT00940000158132	ENSGT00390000018904	ENSGT00950000183068.a.a	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647.g	ENSGT00940000154783.e.a.a.a	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b.n	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426.a	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Marmoset	MODERN SPECIES	78	ENSCJAG00000085645	BRCC3 (ENSCJAG00000004308)	MTCP1 (ENSCJAG00000042284)	CMC4 (ENSCJAG00000078864)	ENSCJAG00000004287	ENSCJAG00000079192	ENSCJAG00000076498	F8 (ENSCJAG00000004258)	SMIM9 (ENSCJAG00000004256)	MPP1 (ENSCJAG00000004227)	DKC1 (ENSCJAG00000004210)	ENSCJAG00000082602	GAB3 (ENSCJAG00000016753)	IKBKG (ENSCJAG00000016764)	G6PD (ENSCJAG00000016775)	FAM3A (ENSCJAG00000016787) ##22	SLC10A3 (ENSCJAG00000077479)	UBL4A (ENSCJAG00000074416)	LAGE3 (ENSCJAG00000041329)	PLXNA3 (ENSCJAG00000016816)	FAM50A (ENSCJAG00000063509)	GDI1 (ENSCJAG00000016910)	ATP6AP1 (ENSCJAG00000040642)	ENSCJAG00000016995	DNASE1L1 (ENSCJAG00000011800)	ENSCJAG00000011822	EMD (ENSCJAG00000011853)	FLNA (ENSCJAG00000034881)	TKTL1 (ENSCJAG00000014368)	TEX28 (ENSCJAG00000042631)	ENSCJAG00000014412
Cebidae_a	ANCESTRAL SPECIES	78	ENSGT00940000161397	ENSGT00940000158132	ENSGT00390000018904	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647.g	ENSGT00940000154783.e.a.a.a	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b.n	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426.a	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Capuchin	MODERN SPECIES	862												ENSCCAG00000030506	IKBKG (ENSCCAG00000030204)	G6PD (ENSCCAG00000033900)	ENSCCAG00000025941	FAM3A (ENSCCAG00000030432) ##22	SLC10A3 (ENSCCAG00000020474)	UBL4A (ENSCCAG00000033285)	LAGE3 (ENSCCAG00000021965)	PLXNA3 (ENSCCAG00000029210)	FAM50A (ENSCCAG00000022089)	GDI1 (ENSCCAG00000023267)	ATP6AP1 (ENSCCAG00000026799)	TAZ (ENSCCAG00000033091)	DNASE1L1 (ENSCCAG00000038109)	ENSCCAG00000024992
Bolivian squirrel monkey	MODERN SPECIES	236	CLIC2 (ENSSBOG00000022219)	RAB39B (ENSSBOG00000025110)	ENSSBOG00000022626	BRCC3 (ENSSBOG00000035771)	MTCP1 (ENSSBOG00000021241)	CMC4 (ENSSBOG00000033964)	ENSSBOG00000034180	F8 (ENSSBOG00000002240)	SMIM9 (ENSSBOG00000018626)	MPP1 (ENSSBOG00000026026)	DKC1 (ENSSBOG00000033746)	GAB3 (ENSSBOG00000027441)	ENSSBOG00000031845	IKBKG (ENSSBOG00000033453)	G6PD (ENSSBOG00000003239)	FAM3A (ENSSBOG00000030279) ##22	SLC10A3 (ENSSBOG00000027728)	UBL4A (ENSSBOG00000030369)	LAGE3 (ENSSBOG00000024470)	PLXNA3 (ENSSBOG00000034877)	FAM50A (ENSSBOG00000029861)	GDI1 (ENSSBOG00000021247)	ATP6AP1 (ENSSBOG00000027327)	TAFAZZIN (ENSSBOG00000029961)	ENSSBOG00000033124	DNASE1L1 (ENSSBOG00000028977)	ENSSBOG00000025724	EMD (ENSSBOG00000027560)	FLNA (ENSSBOG00000035541)	TKTL1 (ENSSBOG00000020176)	TEX28 (ENSSBOG00000035728)
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1311	TMLHE (ENSANAG00000026227)	ENSANAG00000030737	CLIC2 (ENSANAG00000033680)	RAB39B (ENSANAG00000031228)	ENSANAG00000027213	BRCC3 (ENSANAG00000024915)	MTCP1 (ENSANAG00000028247)	ENSANAG00000029218	ENSANAG00000030681	F8 (ENSANAG00000025258)	MPP1 (ENSANAG00000034369)	DKC1 (ENSANAG00000022732)	GAB3 (ENSANAG00000032427)	IKBKG (ENSANAG00000032209)	G6PD (ENSANAG00000031927)	FAM3A (ENSANAG00000028348) ##22	SLC10A3 (ENSANAG00000031182)	ENSANAG00000029762	LAGE3 (ENSANAG00000032507)	PLXNA3 (ENSANAG00000027264)	FAM50A (ENSANAG00000031398)	GDI1 (ENSANAG00000028381)	ATP6AP1 (ENSANAG00000036139)	TAFAZZIN (ENSANAG00000022392)	DNASE1L1 (ENSANAG00000019417)	ENSANAG00000036053
Mas night monkey	MODERN SPECIES	614															ALOX5 (ENSANAG00000029930)	ENSANAG00000021977 ##22	ENSANAG00000029168	MARCHF8 (ENSANAG00000032137)	ZFAND4 (ENSANAG00000022323)	ENSANAG00000026593
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.a.b	ENSGT00410000025802.h.a.a	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000003897.s.b.a.a.b.e.a	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00390000018904	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.a.b	ENSGT00410000025802.h.a.a	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.e.a	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Gibbon	MODERN SPECIES	449	VBP1 (ENSNLEG00000014475)	BRCC3 (ENSNLEG00000014460)	MTCP1 (ENSNLEG00000014453)	CMC4 (ENSNLEG00000027271)	ENSNLEG00000014443	ENSNLEG00000018302	F8 (ENSNLEG00000014427)	SMIM9 (ENSNLEG00000014424)	ENSNLEG00000028336	ENSNLEG00000014423	MPP1 (ENSNLEG00000014358)	DKC1 (ENSNLEG00000014323)	GAB3 (ENSNLEG00000014318)	ENSNLEG00000014311	ENSNLEG00000014300	FAM3A (ENSNLEG00000030950) ##22	SLC10A3 (ENSNLEG00000014293)	ENSNLEG00000014292	LAGE3 (ENSNLEG00000028687)	PLXNA3 (ENSNLEG00000014273)	FAM50A (ENSNLEG00000014266)	GDI1 (ENSNLEG00000014222)	ATP6AP1 (ENSNLEG00000014184)	ENSNLEG00000014176	DNASE1L1 (ENSNLEG00000014149)	ENSNLEG00000028143	EMD (ENSNLEG00000014117)	FLNA (ENSNLEG00000013842)	TKTL1 (ENSNLEG00000013813)	TEX28 (ENSNLEG00000013808)	ENSNLEG00000013787
Hominidae	ANCESTRAL SPECIES	8	ENSGT00390000018904	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.b.b	ENSGT00410000025802.h.a.a	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.f	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843
Orangutan	MODERN SPECIES	242	MTCP1 (ENSPPYG00000035172)	CMC4 (ENSPPYG00000020898)	FUNDC2 (ENSPPYG00000020897)	ENSPPYG00000038630	ENSPPYG00000035928	F8 (ENSPPYG00000020895)	SMIM9 (ENSPPYG00000020894)	MPP1 (ENSPPYG00000020893)	DKC1 (ENSPPYG00000020892)	GAB3 (ENSPPYG00000020891)	CTAG2 (ENSPPYG00000020890)	ENSPPYG00000020888	ENSPPYG00000020887	IKBKG (ENSPPYG00000020886)	G6PD (ENSPPYG00000020885)	FAM3A (ENSPPYG00000020884) ##22	SLC10A3 (ENSPPYG00000020883)	UBL4A (ENSPPYG00000020882)	LAGE3 (ENSPPYG00000033247)	FAM50A (ENSPPYG00000020879)	GDI1 (ENSPPYG00000020878)	ATP6AP1 (ENSPPYG00000020877)	TAFAZZIN (ENSPPYG00000020876)	DNASE1L1 (ENSPPYG00000020875)	RPL10 (ENSPPYG00000020874)	EMD (ENSPPYG00000020873)	FLNA (ENSPPYG00000020871)	TKTL1 (ENSPPYG00000020870)	TEX28 (ENSPPYG00000020869)	ENSPPYG00000020867	MECP2 (ENSPPYG00000020866)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.b.b	ENSGT00530000063801.a.n	ENSGT00410000025802.h.b.a	ENSGT00410000025802.h.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a.i	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.f	ENSGT00530000063687.b.b.b.f	ENSGT00390000003897.s.b.a.a.b.e.a	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426
Gorilla	MODERN SPECIES	523	FUNDC2 (ENSGGOG00000026954)	ENSGGOG00000003617	F8 (ENSGGOG00000003600)	SMIM9 (ENSGGOG00000005354)	ENSGGOG00000025061	MPP1 (ENSGGOG00000001049)	DKC1 (ENSGGOG00000001045)	GAB3 (ENSGGOG00000001042)	ENSGGOG00000025843	ENSGGOG00000043272	ENSGGOG00000022830	ENSGGOG00000040976	ENSGGOG00000025927	IKBKG (ENSGGOG00000004896)	G6PD (ENSGGOG00000004890)	ENSGGOG00000005270 ##22	SLC10A3 (ENSGGOG00000013520)	ENSGGOG00000013509	LAGE3 (ENSGGOG00000013507)	PLXNA3 (ENSGGOG00000013493)	ENSGGOG00000013484	GDI1 (ENSGGOG00000013474)	ATP6AP1 (ENSGGOG00000013466)	TAZ (ENSGGOG00000011947)	DNASE1L1 (ENSGGOG00000000132)	ENSGGOG00000000131	EMD (ENSGGOG00000009388)	FLNA (ENSGGOG00000004199)	TKTL1 (ENSGGOG00000004191)	TEX28 (ENSGGOG00000004188)	ENSGGOG00000004184
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.b.b	ENSGT00530000063801.a.n	ENSGT00410000025802.h.b.a	ENSGT00410000025802.h.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a.i	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.f	ENSGT00530000063687.b.b.b.f	ENSGT00390000003897.s.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426
Human	MODERN SPECIES	1827	MTCP1 (ENSG00000214827)	CMC4 (ENSG00000182712)	FUNDC2 (ENSG00000165775)	F8A1 (ENSG00000288722)	H2AB1 (ENSG00000274183)	F8 (ENSG00000185010)	SMIM9 (ENSG00000203870)	MPP1 (ENSG00000130830)	DKC1 (ENSG00000130826)	GAB3 (ENSG00000160219)	CTAG2 (ENSG00000126890)	CTAG1B (ENSG00000184033)	CTAG1A (ENSG00000268651)	IKBKG (ENSG00000269335)	G6PD (ENSG00000160211)	FAM3A (ENSG00000071889) ##22	SLC10A3 (ENSG00000126903)	UBL4A (ENSG00000102178)	LAGE3 (ENSG00000196976)	PLXNA3 (ENSG00000130827)	FAM50A (ENSG00000071859)	GDI1 (ENSG00000203879)	ATP6AP1 (ENSG00000071553)	TAFAZZIN (ENSG00000102125)	DNASE1L1 (ENSG00000013563)	RPL10 (ENSG00000147403)	EMD (ENSG00000102119)	FLNA (ENSG00000196924)	TKTL1 (ENSG00000007350)	TEX28 (ENSG00000278057)	OPN1MW3 (ENSG00000269433)
Pan	ANCESTRAL SPECIES	43	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00390000016992.bb	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00390000011549.e	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.b.b	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00530000063435.a.i	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a
Chimpanzee	MODERN SPECIES	972	SMIM9 (ENSPTRG00000028167)	ENSPTRG00000046688	MPP1 (ENSPTRG00000022450)	DKC1 (ENSPTRG00000022449)	GAB3 (ENSPTRG00000022447)	ENSPTRG00000022446	ENSPTRG00000045486	ENSPTRG00000052333	ENSPTRG00000043176	ENSPTRG00000040429	ENSPTRG00000022445	ENSPTRG00000044790	ENSPTRG00000050406	IKBKG (ENSPTRG00000040677)	G6PD (ENSPTRG00000022443)	FAM3A (ENSPTRG00000022442) ##22	SLC10A3 (ENSPTRG00000051548)	UBL4A (ENSPTRG00000022440)	LAGE3 (ENSPTRG00000022439)	PLXNA3 (ENSPTRG00000022438)	FAM50A (ENSPTRG00000022437)	GDI1 (ENSPTRG00000028169)	ATP6AP1 (ENSPTRG00000022435)	TAFAZZIN (ENSPTRG00000022434)	DNASE1L1 (ENSPTRG00000042704)	RPL10 (ENSPTRG00000043378)	TKTL1 (ENSPTRG00000022429)	TEX28 (ENSPTRG00000022426)	OPN1LW (ENSPTRG00000022427)	MECP2 (ENSPTRG00000048003)	ENSPTRG00000047302
Bonobo	MODERN SPECIES	369	BRCC3 (ENSPPAG00000039895)	MTCP1 (ENSPPAG00000029273)	CMC4 (ENSPPAG00000030202)	FUNDC2 (ENSPPAG00000028980)	ENSPPAG00000022594	F8 (ENSPPAG00000033513)	SMIM9 (ENSPPAG00000035097)	ENSPPAG00000031767	MPP1 (ENSPPAG00000040588)	DKC1 (ENSPPAG00000023820)	GAB3 (ENSPPAG00000033506)	ENSPPAG00000030022	ENSPPAG00000024171	IKBKG (ENSPPAG00000019041)	G6PD (ENSPPAG00000030117)	ENSPPAG00000028567 ##22	SLC10A3 (ENSPPAG00000036137)	ENSPPAG00000035975	LAGE3 (ENSPPAG00000028018)	PLXNA3 (ENSPPAG00000037363)	ENSPPAG00000043116	GDI1 (ENSPPAG00000027756)	ATP6AP1 (ENSPPAG00000036293)	TAFAZZIN (ENSPPAG00000036682)	DNASE1L1 (ENSPPAG00000012889)	ENSPPAG00000034160	MECP2 (ENSPPAG00000034020)	ENSPPAG00000042175	IRAK1 (ENSPPAG00000040186)	TMEM187 (ENSPPAG00000007444)	HCFC1 (ENSPPAG00000044057)
Cercopithecidae	ANCESTRAL SPECIES	37	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.a.b	ENSGT00410000025802.h.a.a	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00910000147580	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b
Rhinopithecus	ANCESTRAL SPECIES	316										ENSGT00410000025802.h.a.b	ENSGT00410000025802.h.a.a	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00910000147580	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b
Black snub-nosed monkey	MODERN SPECIES	1888										ENSRBIG00000030147	ENSRBIG00000027585	IKBKG (ENSRBIG00000031684)	ENSRBIG00000029055	G6PD (ENSRBIG00000030157)	ENSRBIG00000028634	FAM3A (ENSRBIG00000025198) ##22	SLC10A3 (ENSRBIG00000034698)	UBL4A (ENSRBIG00000023877)	ENSRBIG00000034128	PLXNA3 (ENSRBIG00000035203)	FAM50A (ENSRBIG00000037965)	GDI1 (ENSRBIG00000042799)	ATP6AP1 (ENSRBIG00000036700)	TAFAZZIN (ENSRBIG00000035066)	DNASE1L1 (ENSRBIG00000030074)	ENSRBIG00000042996	ENSRBIG00000039019	ENSRBIG00000037040
Golden snub-nosed monkey	MODERN SPECIES	1454									CTAG2 (ENSRROG00000025938)	ENSRROG00000034699	ENSRROG00000013818	ENSRROG00000035084	IKBKG (ENSRROG00000008677)	G6PD (ENSRROG00000033216)	ENSRROG00000033119	FAM3A (ENSRROG00000043376) ##22	SLC10A3 (ENSRROG00000044112)	UBL4A (ENSRROG00000006560)	LAGE3 (ENSRROG00000012840)	PLXNA3 (ENSRROG00000044893)	FAM50A (ENSRROG00000038239)	ATP6AP1 (ENSRROG00000026809)	TAFAZZIN (ENSRROG00000037988)	DNASE1L1 (ENSRROG00000037526)	ENSRROG00000019247
Cercopithecinae	ANCESTRAL SPECIES	25	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.a.b	ENSGT00410000025802.h.a.a	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00910000147580	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b
Vervet Monkey	MODERN SPECIES	203	BRCC3 (ENSCSAG00000006538)	MTCP1 (ENSCSAG00000006547)	CMC4 (ENSCSAG00000006553)	FUNDC2 (ENSCSAG00000006563)	ENSCSAG00000000519	ENSCSAG00000000520	ENSCSAG00000000521	F8 (ENSCSAG00000006668)	SMIM9 (ENSCSAG00000006693)	MPP1 (ENSCSAG00000006698)	DKC1 (ENSCSAG00000006706)	GAB3 (ENSCSAG00000006717)	ENSCSAG00000006721	IKBKG (ENSCSAG00000006727)	G6PD (ENSCSAG00000006732)	FAM3A (ENSCSAG00000006738) ##22	SLC10A3 (ENSCSAG00000000522)	UBL4A (ENSCSAG00000006742)	ENSCSAG00000006746	PLXNA3 (ENSCSAG00000006756)	EMD (ENSCSAG00000006760)	FLNA (ENSCSAG00000006772)	TKTL1 (ENSCSAG00000006779)	TEX28 (ENSCSAG00000006786)	ENSCSAG00000006792	MECP2 (ENSCSAG00000006798)	IRAK1 (ENSCSAG00000006804)	TMEM187 (ENSCSAG00000000523)	HCFC1 (ENSCSAG00000006809)	RENBP (ENSCSAG00000006814)	NAA10 (ENSCSAG00000006823)
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00390000000950.c.b.d.a.d	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.a.b	ENSGT00410000025802.h.a.a	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00910000147580	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00940000161383	ENSGT00390000011272	ENSGT00940000160502	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b	ENSGT01030000234549.a.a.a.b	ENSGT00940000162843	ENSGT00940000162426	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00910000147580	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b.e.a
Cercopithecinae_d	ANCESTRAL SPECIES	195												ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00910000147580	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b
Drill	MODERN SPECIES	361												ENSMLEG00000009651	ENSMLEG00000037003	IKBKG (ENSMLEG00000032380)	G6PD (ENSMLEG00000040869)	FAM3A (ENSMLEG00000031424) ##22	SLC10A3 (ENSMLEG00000031363)	UBL4A (ENSMLEG00000029271)	LAGE3 (ENSMLEG00000031787)	PLXNA3 (ENSMLEG00000039715)	FAM50A (ENSMLEG00000034206)	GDI1 (ENSMLEG00000014459)	ATP6AP1 (ENSMLEG00000026333)	TAFAZZIN (ENSMLEG00000041537)	DNASE1L1 (ENSMLEG00000042325)	ENSMLEG00000025660
Sooty mangabey	MODERN SPECIES	567														ENSCATG00000021841	G6PD (ENSCATG00000009953)	FAM3A (ENSCATG00000022515) ##22	SLC10A3 (ENSCATG00000032881)	UBL4A (ENSCATG00000036850)	LAGE3 (ENSCATG00000025654)	PLXNA3 (ENSCATG00000031009)	FAM50A (ENSCATG00000032169)	GDI1 (ENSCATG00000031684)	ATP6AP1 (ENSCATG00000039938)	TAFAZZIN (ENSCATG00000034866)	DNASE1L1 (ENSCATG00000014042)	ENSCATG00000030970
Macaca	ANCESTRAL SPECIES	13	ENSGT00950000183068.a.a	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783.e.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.a.b	ENSGT00410000025802.h.a.a	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00390000018904.hb	ENSGT00950000183068.a.a	ENSGT00390000000360.q.a	ENSGT00390000006885.a	ENSGT00940000154783.e.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.h.a.b	ENSGT00410000025802.h.a.a	ENSGT00530000063808.a	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.b.b.b	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a.m	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Rhesus	MODERN SPECIES	327	ENSMMUG00000009476	H2AB1 (ENSMMUG00000059127)	F8 (ENSMMUG00000010245)	SMIM9 (ENSMMUG00000062044)	ENSMMUG00000060911	MPP1 (ENSMMUG00000005772)	DKC1 (ENSMMUG00000005768)	GAB3 (ENSMMUG00000015190)	ENSMMUG00000045112	ENSMMUG00000051337	IKBKG (ENSMMUG00000017277)	ENSMMUG00000051483	ENSMMUG00000017405	ENSMMUG00000052573	G6PD (ENSMMUG00000017409)	FAM3A (ENSMMUG00000009012) ##22	ENSMMUG00000063935	UBL4A (ENSMMUG00000009015)	LAGE3 (ENSMMUG00000040340)	PLXNA3 (ENSMMUG00000005507)	FAM50A (ENSMMUG00000005505)	GDI1 (ENSMMUG00000005502)	ATP6AP1 (ENSMMUG00000005501)	TAFAZZIN (ENSMMUG00000005498)	DNASE1L1 (ENSMMUG00000050873)	RPL10 (ENSMMUG00000005494)	FLNA (ENSMMUG00000013668)	EMD (ENSMMUG00000013678)	TKTL1 (ENSMMUG00000013667)	ENSMMUG00000050314	ENSMMUG00000054361
Crab-eating macaque	MODERN SPECIES	175	ENSMFAG00000032659	RAB39B (ENSMFAG00000036188)	ENSMFAG00000064770	ENSMFAG00000050091	ENSMFAG00000058523	VBP1 (ENSMFAG00000032032)	ENSMFAG00000056611	BRCC3 (ENSMFAG00000031106)	MTCP1 (ENSMFAG00000052287)	ENSMFAG00000045993	FUNDC2 (ENSMFAG00000038031)	F8 (ENSMFAG00000039948)	ENSMFAG00000060522	IKBKG (ENSMFAG00000032230)	G6PD (ENSMFAG00000043207)	FAM3A (ENSMFAG00000041814) ##22	SLC10A3 (ENSMFAG00000035989)	UBL4A (ENSMFAG00000000884)	LAGE3 (ENSMFAG00000004038)	PLXNA3 (ENSMFAG00000040837)	FAM50A (ENSMFAG00000021581)	GDI1 (ENSMFAG00000037198)	ATP6AP1 (ENSMFAG00000003619)	TAFAZZIN (ENSMFAG00000028691)	DNASE1L1 (ENSMFAG00000038787)	ENSMFAG00000040824	FLNA (ENSMFAG00000035790)	EMD (ENSMFAG00000045316)	TKTL1 (ENSMFAG00000031072)	ENSMFAG00000059786	ENSMFAG00000039596
Pig-tailed macaque	MODERN SPECIES	403															G6PD (ENSMNEG00000031229)	FAM3A (ENSMNEG00000034258) ##22	SLC10A3 (ENSMNEG00000042913)	UBL4A (ENSMNEG00000039513)	LAGE3 (ENSMNEG00000044542)	PLXNA3 (ENSMNEG00000029520)	FAM50A (ENSMNEG00000033378)	GDI1 (ENSMNEG00000029142)	ATP6AP1 (ENSMNEG00000040534)	TAFAZZIN (ENSMNEG00000038446)	DNASE1L1 (ENSMNEG00000032874)	ENSMNEG00000038094	FLNA (ENSMNEG00000040468)	EMD (ENSMNEG00000042917)	TKTL1 (ENSMNEG00000045070)	TEX28 (ENSMNEG00000032132)
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00390000012647	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Tree shrew	MODERN SPECIES	3679															G6PD (ENSTBEG00000016360)	FAM3A (ENSTBEG00000016091) ##22
Glires	ANCESTRAL SPECIES	10	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Lagomorpha	ANCESTRAL SPECIES	103														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00390000011272
Rabbit	MODERN SPECIES	549														IKBKG (ENSOCUG00000007873)	G6PD (ENSOCUG00000007866)	FAM3A (ENSOCUG00000015663) ##22	SLC10A3 (ENSOCUG00000022433)	LAGE3 (ENSOCUG00000028990)	PLXNA3 (ENSOCUG00000015623)	FAM50A (ENSOCUG00000017644)	GDI1 (ENSOCUG00000017639)	ENSOCUG00000017631	TAFAZZIN (ENSOCUG00000000885)	RA_m006_jsm7BED4f (ENSOCUG00000024511)	EMD (ENSOCUG00000000882)	FLNA (ENSOCUG00000000880)	TKTL1 (ENSOCUG00000000883)	TEX28 (ENSOCUG00000021000)	OPN1MW (ENSOCUG00000011466)	MECP2 (ENSOCUG00000013147)	IRAK1 (ENSOCUG00000025860)
Rodentia	ANCESTRAL SPECIES	10	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00390000018904	ENSGT00390000000360.r.b	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Kangaroo rat	MODERN SPECIES	526	Rab39b (ENSDORG00000029496)	ENSDORG00000004628	ENSDORG00000013161	ENSDORG00000029487	Mtcp1 (ENSDORG00000013159)	Fundc2 (ENSDORG00000013156)	ENSDORG00000028874	F8 (ENSDORG00000013155)	ENSDORG00000024019	Mpp1 (ENSDORG00000013568)	ENSDORG00000013566	Gab3 (ENSDORG00000006809)	ENSDORG00000000625	Ikbkg (ENSDORG00000028140)	ENSDORG00000012731	Fam3a (ENSDORG00000025173) ##22	Slc10a3 (ENSDORG00000005197)	Ubl4a (ENSDORG00000005196)	Lage3 (ENSDORG00000029875)	Plxna3 (ENSDORG00000000853)	Fam50a (ENSDORG00000008851)	Gdi1 (ENSDORG00000008848)	Atp6ap1 (ENSDORG00000008847)	Tafazzin (ENSDORG00000029677)	ENSDORG00000004369	Flna (ENSDORG00000004370)	Emd (ENSDORG00000004375)	Tktl1 (ENSDORG00000013785)	Tex28 (ENSDORG00000010136)	Opn1mw (ENSDORG00000026454)	Mecp2 (ENSDORG00000014978)
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00390000018904	ENSGT00390000000360.r.b	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Lesser Egyptian jerboa	MODERN SPECIES	224														Ikbkg (ENSJJAG00000023964)	ENSJJAG00000023806	Fam3a (ENSJJAG00000023156) ##22	Slc10a3 (ENSJJAG00000022929)	ENSJJAG00000022788	Lage3 (ENSJJAG00000022478)	Plxna3 (ENSJJAG00000020257)	Fam50a (ENSJJAG00000010389)	Gdi1 (ENSJJAG00000008815)	ENSJJAG00000019557	Tafazzin (ENSJJAG00000015233)	ENSJJAG00000014235	Emd (ENSJJAG00000019656)	Flna (ENSJJAG00000015450)	Tktl1 (ENSJJAG00000010328)	Tex28 (ENSJJAG00000019769)	Opn1mw (ENSJJAG00000022699)	ENSJJAG00000022596
Muroidea	ANCESTRAL SPECIES	13	ENSGT00390000018904	ENSGT00390000000360.r.b	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	660												Or13ae2 (ENSNGAG00000001537)	ENSNGAG00000024034	Ikbkg (ENSNGAG00000019535)	ENSNGAG00000020668	Fam3a (ENSNGAG00000016683) ##22	Slc10a3 (ENSNGAG00000007975)	Ubl4a (ENSNGAG00000023782)	Lage3 (ENSNGAG00000023293)	Plxna3 (ENSNGAG00000022548)	ENSNGAG00000012608	Fam50a (ENSNGAG00000021495)	Gdi1 (ENSNGAG00000023333)	Atp6ap1 (ENSNGAG00000021512)	Tafazzin (ENSNGAG00000008680)	Dnase1l1 (ENSNGAG00000024155)	ENSNGAG00000023746	Emd (ENSNGAG00000018770)	Flna (ENSNGAG00000013524)	Tex28 (ENSNGAG00000023701)	Opn1mw (ENSNGAG00000011604)
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00390000018904	ENSGT00390000000360.r.b.a.a	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00390000018904	ENSGT00390000000360.r.b.a.a	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f.db.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j	ENSGT00410000025802.g.b.q.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00390000018904	ENSGT00390000000360.r.b.a.a	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f.db.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j	ENSGT00410000025802.g.b.q.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Northern American deer mouse	MODERN SPECIES	475	Cmc4 (ENSPEMG00000024388)	ENSPEMG00000026725	F8 (ENSPEMG00000014119)	Smim9 (ENSPEMG00000010945)	Mpp1 (ENSPEMG00000014261)	ENSPEMG00000022395	Dkc1 (ENSPEMG00000013348)	Gab3 (ENSPEMG00000012634)	Or13ae2 (ENSPEMG00000025767)	Or7r1 (ENSPEMG00000009130)	ENSPEMG00000026245	ENSPEMG00000027888	ENSPEMG00000029875	Ikbkg (ENSPEMG00000031110)	ENSPEMG00000017532	Fam3a (ENSPEMG00000004757) ##22	Ubl4a (ENSPEMG00000027881)	Lage3 (ENSPEMG00000011229)	Plxna3 (ENSPEMG00000012781)	Fam50a (ENSPEMG00000001727)	Gdi1 (ENSPEMG00000010952)	Atp6ap1 (ENSPEMG00000009724)	Tafazzin (ENSPEMG00000007822)	Dnase1l1 (ENSPEMG00000013008)	ENSPEMG00000015703	Emd (ENSPEMG00000012081)	Flna (ENSPEMG00000009562)	Tktl1 (ENSPEMG00000012644)	Tex28 (ENSPEMG00000009005)	Opn1mw (ENSPEMG00000010994)	Mecp2 (ENSPEMG00000015115)
Prairie vole	MODERN SPECIES	168	Vbp1 (ENSMOCG00000013440)	ENSMOCG00000000841	Cmc4 (ENSMOCG00000019858)	Mtcp1 (ENSMOCG00000002450)	Fundc2 (ENSMOCG00000013641)	F8 (ENSMOCG00000006178)	ENSMOCG00000001114	Smim9 (ENSMOCG00000003619)	Mpp1 (ENSMOCG00000000082)	ENSMOCG00000001169	Gab3 (ENSMOCG00000015626)	Or7r1 (ENSMOCG00000002349)	ENSMOCG00000017711	Ikbkg (ENSMOCG00000011244)	ENSMOCG00000015421	Fam3a (ENSMOCG00000016025) ##22	Slc10a3 (ENSMOCG00000008789)	Ubl4a (ENSMOCG00000000785)	ENSMOCG00000002473	Plxna3 (ENSMOCG00000002375)	Fam50a (ENSMOCG00000015890)	Gdi1 (ENSMOCG00000006575)	Atp6ap1 (ENSMOCG00000001026)	Tafazzin (ENSMOCG00000010108)	Dnase1l1 (ENSMOCG00000017402)	ENSMOCG00000013831	Emd (ENSMOCG00000003977)	Flna (ENSMOCG00000007826)	Tex28 (ENSMOCG00000011491)	ENSMOCG00000017630
Cricetinae	ANCESTRAL SPECIES	46	ENSGT00940000158132	ENSGT00390000018904	ENSGT00390000000360.r.b.a.a	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f.db.b	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b.q.a	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b
Chinese hamster chok1gshd	MODERN SPECIES	16	ENSCGRG00001012855	Brcc3 (ENSCGRG00001000059)	Mtcp1 (ENSCGRG00001021448)	Cmc4 (ENSCGRG00001024106)	Fundc2 (ENSCGRG00001005074)	F8 (ENSCGRG00001018172)	Smim9 (ENSCGRG00001020847)	Mpp1 (ENSCGRG00001000334)	ENSCGRG00001014574	Gab3 (ENSCGRG00001024780)	ENSCGRG00001000852	ENSCGRG00001018213	Or7r1 (ENSCGRG00001002331)	Ikbkg (ENSCGRG00001023852)	G6PDH (ENSCGRG00001009805)	Fam3a (ENSCGRG00001017590) ##22	Ubl4a (ENSCGRG00001024649)	Lage3 (ENSCGRG00001006943)	Plxna3 (ENSCGRG00001018950)	Fam50a (ENSCGRG00001022147)	Gdi1 (ENSCGRG00001020747)	Atp6ap1 (ENSCGRG00001015351)	TAZ (ENSCGRG00001016189)	DNASE1L1 (ENSCGRG00001019882)	ENSCGRG00001008387	Emd (ENSCGRG00001023962)	Flna (ENSCGRG00001013154)	ENSCGRG00001010950	Tex28 (ENSCGRG00001014288)	Opn1mw (ENSCGRG00001024157)	Mecp2 (ENSCGRG00001017650)
Golden Hamster	MODERN SPECIES	857														Ikbkg (ENSMAUG00000008491)	ENSMAUG00000008547	Fam3a (ENSMAUG00000009961) ##22	Slc10a3 (ENSMAUG00000005496)	Ubl4a (ENSMAUG00000019612)	Lage3 (ENSMAUG00000021750)	Plxna3 (ENSMAUG00000019645)	Fam50a (ENSMAUG00000020359)	Gdi1 (ENSMAUG00000001476)	Atp6ap1 (ENSMAUG00000014514)	Tafazzin (ENSMAUG00000001836)	Dnase1l1 (ENSMAUG00000005714)	ENSMAUG00000013615	Emd (ENSMAUG00000016655)	Tex28 (ENSMAUG00000011775)	Opn1mw (ENSMAUG00000017549)	Mecp2 (ENSMAUG00000018195)	Irak1 (ENSMAUG00000002430)
Murinae	ANCESTRAL SPECIES	14	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b.l.b	ENSGT00390000000062.x.b.k.b	ENSGT00390000016992	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Mus	ANCESTRAL SPECIES	9	ENSGT00390000018904	ENSGT00390000000360.r.b.a.a	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a	ENSGT00530000063808.a	ENSGT00530000063435.a.o	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Mus_A	ANCESTRAL SPECIES	15	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b	ENSGT00390000000062.x.b.l.b	ENSGT00390000000062.x.b.k.b	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a	ENSGT00530000063808.a	ENSGT00530000063435.a.o	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.a.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Mus_B	ANCESTRAL SPECIES	14	ENSGT00390000000360.r.b.a.a	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00390000001700.a.b.b.o.a	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a	ENSGT00530000063808.a	ENSGT00530000063435.a.o	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000158132	ENSGT00390000018904	ENSGT00390000000360.r.b.a.a	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b.q.a	ENSGT00530000063808.a	ENSGT00530000063435.a.o	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
spretus	MODERN SPECIES	19	Brcc3 (MGP_SPRETEiJ_G0034358)	Mtcp1 (MGP_SPRETEiJ_G0034357)	Cmc4 (MGP_SPRETEiJ_G0034356)	Fundc2 (MGP_SPRETEiJ_G0034355)	F8 (MGP_SPRETEiJ_G0034354)	Smim9 (MGP_SPRETEiJ_G0034353)	Mpp1 (MGP_SPRETEiJ_G0034352)	Dkc1 (MGP_SPRETEiJ_G0034351)	MGP_SPRETEiJ_G0034348	MGP_SPRETEiJ_G0034347	Or13ae2 (MGP_SPRETEiJ_G0034346)	Or7r1 (MGP_SPRETEiJ_G0034345)	MGP_SPRETEiJ_G0034344	G6pdx (MGP_SPRETEiJ_G0034343)	Ikbkg (MGP_SPRETEiJ_G0034342)	Fam3a (MGP_SPRETEiJ_G0034341) ##22	Slc10a3 (MGP_SPRETEiJ_G0034340)	Ubl4a (MGP_SPRETEiJ_G0034339)	Lage3 (MGP_SPRETEiJ_G0034338)	Plxna3 (MGP_SPRETEiJ_G0034337)	Fam50a (MGP_SPRETEiJ_G0034336)	Gdi1 (MGP_SPRETEiJ_G0034335)	Atp6ap1 (MGP_SPRETEiJ_G0034334)	Tafazzin (MGP_SPRETEiJ_G0034333)	Dnase1l1 (MGP_SPRETEiJ_G0034332)	MGP_SPRETEiJ_G0034331	Emd (MGP_SPRETEiJ_G0034330)	Flna (MGP_SPRETEiJ_G0034329)	Tktl1 (MGP_SPRETEiJ_G0034328)	Tex28 (MGP_SPRETEiJ_G0034327)	Opn1mw (MGP_SPRETEiJ_G0034326)
Mouse	MODERN SPECIES	37	Cmc4 (ENSMUSG00000090110)	Fundc2 (ENSMUSG00000031198)	F8 (ENSMUSG00000031196)	Smim9 (ENSMUSG00000073094)	Mpp1 (ENSMUSG00000031402)	Dkc1 (ENSMUSG00000031403)	Gab3 (ENSMUSG00000032750)	Pwwp4d (ENSMUSG00000079531)	Ctag2l2 (ENSMUSG00000079532)	Pwwp4c (ENSMUSG00000079534)	Or13ae2 (ENSMUSG00000051706)	Or7r1 (ENSMUSG00000043715)	Ctag2l1 (ENSMUSG00000079536)	G6pdx (ENSMUSG00000031400)	Ikbkg (ENSMUSG00000004221)	Fam3a (ENSMUSG00000031399) ##22	Slc10a3 (ENSMUSG00000032806)	Ubl4a (ENSMUSG00000015290)	Lage3 (ENSMUSG00000015289)	Plxna3 (ENSMUSG00000031398)	Fam50a (ENSMUSG00000001962)	Gdi1 (ENSMUSG00000015291)	Atp6ap1 (ENSMUSG00000019087)	Tafazzin (ENSMUSG00000009995)	Dnase1l1 (ENSMUSG00000019088)	Rpl10 (ENSMUSG00000008682)	Emd (ENSMUSG00000001964)	Flna (ENSMUSG00000031328)	Tktl1 (ENSMUSG00000031397)	Tex28 (ENSMUSG00000062564)	Opn1mw (ENSMUSG00000031394)
Ryukyu mouse	MODERN SPECIES	19	Cldn34d (MGP_CAROLIEiJ_G0033201)	Cldn34b4 (MGP_CAROLIEiJ_G0033200)	Pls3 (MGP_CAROLIEiJ_G0033199)	MGP_CAROLIEiJ_G0033198	Mtcp1 (MGP_CAROLIEiJ_G0033197)	Cmc4 (MGP_CAROLIEiJ_G0033196)	Fundc2 (MGP_CAROLIEiJ_G0033195)	F8 (MGP_CAROLIEiJ_G0033194)	Smim9 (MGP_CAROLIEiJ_G0033193)	Mpp1 (MGP_CAROLIEiJ_G0033192)	Dkc1 (MGP_CAROLIEiJ_G0033191)	Or13ae2 (MGP_CAROLIEiJ_G0033190)	Or7r1 (MGP_CAROLIEiJ_G0033189)	G6pdx (MGP_CAROLIEiJ_G0033188)	Ikbkg (MGP_CAROLIEiJ_G0033187)	Fam3a (MGP_CAROLIEiJ_G0033186) ##22	Slc10a3 (MGP_CAROLIEiJ_G0033185)	Ubl4a (MGP_CAROLIEiJ_G0033184)	Lage3 (MGP_CAROLIEiJ_G0033183)	Plxna3 (MGP_CAROLIEiJ_G0033182)	Fam50a (MGP_CAROLIEiJ_G0033181)	Gdi1 (MGP_CAROLIEiJ_G0033180)	Atp6ap1 (MGP_CAROLIEiJ_G0033179)	Tafazzin (MGP_CAROLIEiJ_G0033178)	Dnase1l1 (MGP_CAROLIEiJ_G0033177)	MGP_CAROLIEiJ_G0033176	Emd (MGP_CAROLIEiJ_G0033175)	Flna (MGP_CAROLIEiJ_G0033174)	Tktl1 (MGP_CAROLIEiJ_G0033173)	Tex28 (MGP_CAROLIEiJ_G0033172)	Opn1mw (MGP_CAROLIEiJ_G0033171)
Shrew mouse	MODERN SPECIES	23	Cldn34b4 (MGP_PahariEiJ_G0031744)	Pls3 (MGP_PahariEiJ_G0031743)	Brcc3 (MGP_PahariEiJ_G0031742)	Mtcp1 (MGP_PahariEiJ_G0031741)	Cmc4 (MGP_PahariEiJ_G0031740)	Fundc2 (MGP_PahariEiJ_G0031739)	F8 (MGP_PahariEiJ_G0031738)	Smim9 (MGP_PahariEiJ_G0031737)	Mpp1 (MGP_PahariEiJ_G0031736)	Dkc1 (MGP_PahariEiJ_G0031735)	Gab3 (MGP_PahariEiJ_G0031734)	Or13ae2 (MGP_PahariEiJ_G0031733)	Or7r1 (MGP_PahariEiJ_G0031732)	G6pdx (MGP_PahariEiJ_G0031731)	Ikbkg (MGP_PahariEiJ_G0031730)	Fam3a (MGP_PahariEiJ_G0031729) ##22	Slc10a3 (MGP_PahariEiJ_G0031728)	Ubl4a (MGP_PahariEiJ_G0031727)	Lage3 (MGP_PahariEiJ_G0031726)	Plxna3 (MGP_PahariEiJ_G0031725)	Fam50a (MGP_PahariEiJ_G0031724)	Gdi1 (MGP_PahariEiJ_G0031723)	Atp6ap1 (MGP_PahariEiJ_G0031722)	Tafazzin (MGP_PahariEiJ_G0031721)	Dnase1l1 (MGP_PahariEiJ_G0031720)	MGP_PahariEiJ_G0031719	Emd (MGP_PahariEiJ_G0031718)	Flna (MGP_PahariEiJ_G0031717)	MGP_PahariEiJ_G0031716	Tex28 (MGP_PahariEiJ_G0031715)	Opn1mw (MGP_PahariEiJ_G0031714)
Rat	MODERN SPECIES	46										ENSRNOG00000067246	LOC120099253 (ENSRNOG00000061511)	Or7r1 (ENSRNOG00000058820)	LOC690348 (ENSRNOG00000060839)	Ikbkg (ENSRNOG00000060936)	G6pd (ENSRNOG00000056728)	Fam3a (ENSRNOG00000060623) ##22	Ubl4a (ENSRNOG00000053061)	Slc10a3 (ENSRNOG00000060580)	Lage3 (ENSRNOG00000053456)	Plxna3 (ENSRNOG00000060464)	Fam50a (ENSRNOG00000058439)	Gdi1 (ENSRNOG00000056870)	Atp6ap1 (ENSRNOG00000054352)	Tafazzin (ENSRNOG00000053023)	ENSRNOG00000063225	Dnase1l1 (ENSRNOG00000055641)	Rpl10 (ENSRNOG00000056765)	Emd (ENSRNOG00000058882)	Flna (ENSRNOG00000054890)	Tktl1 (ENSRNOG00000055557)	Tex28 (ENSRNOG00000051438)
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00390000000360.r.b	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00390000016992	ENSGT00940000163020	ENSGT00940000160294	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT00410000025802.g.b	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Sciuridae	ANCESTRAL SPECIES	27													ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Marmotini	ANCESTRAL SPECIES	83													ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.A.e	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b
Marmotini_b	ANCESTRAL SPECIES	124													ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.A.e	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b
Arctic ground squirrel	MODERN SPECIES	823										ENSUPAG00010010746	ENSUPAG00010010780	ENSUPAG00010010787	ENSUPAG00010010804	ENSUPAG00010010808	IKBKG (ENSUPAG00010010819)	FAM3A (ENSUPAG00010010917) ##22	SLC10A3 (ENSUPAG00010010974)	ENSUPAG00010010991	ENSUPAG00010010993	PLXNA3 (ENSUPAG00010011001)	ENSUPAG00010011078	GDI1 (ENSUPAG00010011085)	ATP6AP1 (ENSUPAG00010011086)	TAFAZZIN (ENSUPAG00010000055)	DNASE1L1 (ENSUPAG00010000232)	ENSUPAG00010000252	EMD (ENSUPAG00010000276)	FLNA (ENSUPAG00010000336)
Squirrel	MODERN SPECIES	409													ENSSTOG00000027400	G6PD (ENSSTOG00000021077)	IKBKG (ENSSTOG00000011082)	FAM3A (ENSSTOG00000022234) ##22	SLC10A3 (ENSSTOG00000026515)	UBL4A (ENSSTOG00000022150)	PLXNA3 (ENSSTOG00000003432)	ENSSTOG00000004448	GDI1 (ENSSTOG00000004429)	ATP6AP1 (ENSSTOG00000004401)	TAFAZZIN (ENSSTOG00000011873)	DNASE1L1 (ENSSTOG00000011867)	ENSSTOG00000011857	EMD (ENSSTOG00000014689)	FLNA (ENSSTOG00000005036)	TKTL1 (ENSSTOG00000005014)	TEX28 (ENSSTOG00000022078)	ENSSTOG00000024701	MECP2 (ENSSTOG00000006094)
Alpin marmot	MODERN SPECIES	136													ENSMMMG00000014778	IKBKG (ENSMMMG00000014671)	G6PD (ENSMMMG00000014645)	FAM3A (ENSMMMG00000014550) ##22	SLC10A3 (ENSMMMG00000014545)	UBL4A (ENSMMMG00000014537)	PLXNA3 (ENSMMMG00000014513)	FAM50A (ENSMMMG00000014490)	GDI1 (ENSMMMG00000014475)	TAFAZZIN (ENSMMMG00000014302)	DNASE1L1 (ENSMMMG00000014299)	ENSMMMG00000014279	EMD (ENSMMMG00000014270)	FLNA (ENSMMMG00000010080)	TKTL1 (ENSMMMG00000010036)	TEX28 (ENSMMMG00000010023)	ENSMMMG00000010010	MECP2 (ENSMMMG00000009970)	IRAK1 (ENSMMMG00000009239)
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005016124	F8 (ENSSVLG00005016200)	ENSSVLG00005016424	ENSSVLG00005016435	SMIM9 (ENSSVLG00005016452)	MPP1 (ENSSVLG00005016498)	DKC1 (ENSSVLG00005016642)	GAB3 (ENSSVLG00005016708)	ENSSVLG00005016985	ENSSVLG00005017050	ENSSVLG00005017122	ENSSVLG00005017166	ENSSVLG00005017218	IKBKG (ENSSVLG00005017293)	G6PD (ENSSVLG00005017520)	FAM3A (ENSSVLG00005017584) ##22	SLC10A3 (ENSSVLG00005017774)	UBL4A (ENSSVLG00005017819)	LAGE3 (ENSSVLG00005017858)	PLXNA3 (ENSSVLG00005017881)	FAM50A (ENSSVLG00005017921)	GDI1 (ENSSVLG00005017962)	ATP6AP1 (ENSSVLG00005018016)	TAFAZZIN (ENSSVLG00005018196)	DNASE1L1 (ENSSVLG00005018343)	ENSSVLG00005018375	FLNA (ENSSVLG00005018546)	EMD (ENSSVLG00005019520)	TKTL1 (ENSSVLG00005017318)	TEX28 (ENSSVLG00005017596)	ENSSVLG00005017738
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT00940000158132	ENSGT00390000018904	ENSGT00950000183068.a.a	ENSGT00390000000360.r.a.a	ENSGT00390000000360.r.b	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.B.a.a	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT00940000158132	ENSGT00390000018904	ENSGT00950000183068.a.a	ENSGT00390000000360.r.a.a	ENSGT00390000000360.r.b	ENSGT00390000006885.a	ENSGT00390000012647.d	ENSGT00940000154783.f	ENSGT00940000160294	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.B.a.a	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Hystricomorpha_b	ANCESTRAL SPECIES	84														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.g.a	ENSGT01050000244850.A.a	ENSGT00390000004735.B.a.a	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00390000002034	ENSGT00940000153588.b	ENSGT00940000162426	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b
Degu	MODERN SPECIES	259														IKBKG (ENSODEG00000005911)	ENSODEG00000006077	FAM3A (ENSODEG00000006189) ##22	UBL4A (ENSODEG00000006287)	ENSODEG00000006315	PLXNA3 (ENSODEG00000006368)	ENSODEG00000006510	GDI1 (ENSODEG00000006550)	ATP6AP1 (ENSODEG00000003643)	TAFAZZIN (ENSODEG00000003758)	DNASE1L1 (ENSODEG00000003830)	ENSODEG00000003868	EMD (ENSODEG00000003890)	FLNA (ENSODEG00000004055)	TKTL1 (ENSODEG00000004431)	ENSODEG00000004454	ENSODEG00000004473	ENSODEG00000004516
Long-tailed chinchilla	MODERN SPECIES	287												ENSCLAG00000017603	ENSCLAG00000017457	IKBKG (ENSCLAG00000003721)	G6PD (ENSCLAG00000003284)	FAM3A (ENSCLAG00000002528) ##22	SLC10A3 (ENSCLAG00000002307)	UBL4A (ENSCLAG00000002161)	LAGE3 (ENSCLAG00000002127)	PLXNA3 (ENSCLAG00000001910)	ENSCLAG00000002733	GDI1 (ENSCLAG00000002425)	ATP6AP1 (ENSCLAG00000002132)	TAFAZZIN (ENSCLAG00000010970)	DNASE1L1 (ENSCLAG00000003494)	ENSCLAG00000003108	FLNA (ENSCLAG00000003106)	EMD (ENSCLAG00000002874)	TKTL1 (ENSCLAG00000001825)	ENSCLAG00000001715	MECP2 (ENSCLAG00000001648)
Guinea pig	MODERN SPECIES	148	TMLHE (ENSCPOG00000005415)	CLIC2 (ENSCPOG00000007641)	RAB39B (ENSCPOG00000039524)	VBP1 (ENSCPOG00000013652)	ENSCPOG00000001882	CMC4 (ENSCPOG00000033896)	MTCP1 (ENSCPOG00000034922)	FUNDC2 (ENSCPOG00000015635)	F8 (ENSCPOG00000007773)	MPP1 (ENSCPOG00000008826)	DKC1 (ENSCPOG00000008825)	GAB3 (ENSCPOG00000002987)	ENSCPOG00000026136	IKBKG (ENSCPOG00000021550)	G6PD (ENSCPOG00000021395)	FAM3A (ENSCPOG00000019367) ##22	SLC10A3 (ENSCPOG00000007289)	UBL4A (ENSCPOG00000040690)	ENSCPOG00000034445	PLXNA3 (ENSCPOG00000011493)	ENSCPOG00000005974	GDI1 (ENSCPOG00000032738)	ATP6AP1 (ENSCPOG00000005972)	TAFAZZIN (ENSCPOG00000020454)	DNASE1L1 (ENSCPOG00000005648)	ENSCPOG00000002355	EMD (ENSCPOG00000002642)	FLNA (ENSCPOG00000002672)	TKTL1 (ENSCPOG00000011767)	ENSCPOG00000021789	ENSCPOG00000011198
Naked mole-rat female	MODERN SPECIES	31														ENSHGLG00000032904	G6PD (ENSHGLG00000001124)	FAM3A (ENSHGLG00000005912) ##22	ENSHGLG00000003702	LAGE3 (ENSHGLG00000039993)	PLXNA3 (ENSHGLG00000002186)	ENSHGLG00000039319	GDI1 (ENSHGLG00000003275)	ATP6AP1 (ENSHGLG00000002607)	ENSHGLG00000009984	DNASE1L1 (ENSHGLG00000013868)	RPL10 (ENSHGLG00000002349)	TKTL1 (ENSHGLG00000042978)	ENSHGLG00000043472	MECP2 (ENSHGLG00000000899)	IRAK1 (ENSHGLG00000002116)	HCFC1 (ENSHGLG00000001143)	RENBP (ENSHGLG00000009835)
Atlantogenata	ANCESTRAL SPECIES	70	ENSGT00950000183068.a.a	ENSGT00390000000360	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00390000016992	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.h	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b
Xenarthra	ANCESTRAL SPECIES	103														ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.b.a.b.b	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162426	ENSGT00940000162843	ENSGT00530000063687.b.b.b	ENSGT00940000160502
Armadillo	MODERN SPECIES	4500														IKBKG (ENSDNOG00000010758)	G6PD (ENSDNOG00000010727)	FAM3A (ENSDNOG00000006532) ##22	SLC10A3 (ENSDNOG00000035600)	UBL4A (ENSDNOG00000002769)	PLXNA3 (ENSDNOG00000025707)	ENSDNOG00000041781	GDI1 (ENSDNOG00000040963)	ATP6AP1 (ENSDNOG00000015526)	TAFAZZIN (ENSDNOG00000049167)	DNASE1L1 (ENSDNOG00000045597)	ENSDNOG00000037062	FLNA (ENSDNOG00000037289)	EMD (ENSDNOG00000048541)	TKTL1 (ENSDNOG00000024515)	TEX28 (ENSDNOG00000018401)	MECP2 (ENSDNOG00000013419)	IRAK1 (ENSDNOG00000014412)
Afrotheria	ANCESTRAL SPECIES	82	ENSGT00390000018904	ENSGT00390000000360	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00390000016992	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.h	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.a	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00940000162426
Tenrec	MODERN SPECIES	6100															ENSETEG00000002563	FAM3A (ENSETEG00000002560) ##22
Afrotheria_a	ANCESTRAL SPECIES	81	ENSGT00390000018904	ENSGT00390000000360	ENSGT00390000006885.a	ENSGT00390000012647	ENSGT00940000154783	ENSGT00940000160294	ENSGT00390000016992	ENSGT00390000005685	ENSGT00940000158744	ENSGT00510000047092	ENSGT00940000159803	ENSGT01100000263574.b.j	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802.h	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.s.a	ENSGT00940000153588.b	ENSGT00390000002034	ENSGT00940000162843	ENSGT01030000234549.a.a.a.b	ENSGT00530000063687.b.b.b
Elephant	MODERN SPECIES	50	VBP1 (ENSLAFG00000016507)	BRCC3 (ENSLAFG00000013564)	MTCP1 (ENSLAFG00000028512)	CMC4 (ENSLAFG00000020599)	ENSLAFG00000015289	F8 (ENSLAFG00000015274)	ENSLAFG00000003610	SMIM9 (ENSLAFG00000032056)	MPP1 (ENSLAFG00000011928)	DKC1 (ENSLAFG00000000221)	GAB3 (ENSLAFG00000001708)	ENSLAFG00000028603	ENSLAFG00000010146	IKBKG (ENSLAFG00000026529)	G6PD (ENSLAFG00000010694)	FAM3A (ENSLAFG00000032131) ##22	SLC10A3 (ENSLAFG00000011108)	UBL4A (ENSLAFG00000022192)	ENSLAFG00000016044	PLXNA3 (ENSLAFG00000031276)	ENSLAFG00000008766	GDI1 (ENSLAFG00000008761)	ATP6AP1 (ENSLAFG00000008757)	TAFAZZIN (ENSLAFG00000003502)	DNASE1L1 (ENSLAFG00000003498)	ENSLAFG00000031860	FLNA (ENSLAFG00000006359)	EMD (ENSLAFG00000005993)	ENSLAFG00000005145	ENSLAFG00000005142	ENSLAFG00000010311
Hyrax	MODERN SPECIES	5854																FAM3A (ENSPCAG00000016197) ##22	SLC10A3 (ENSPCAG00000016167)	ENSPCAG00000016095	ENSPCAG00000016044	PLXNA3 (ENSPCAG00000015846)	ENSPCAG00000015755	GDI1 (ENSPCAG00000015676)	ATP6AP1 (ENSPCAG00000015619)
Platypus	MODERN SPECIES	17	SASH3 (ENSOANG00000014543)	ZDHHC9 (ENSOANG00000007237)	ENSOANG00000013483	BCORL1 (ENSOANG00000012035)	ENSOANG00000046823	ENSOANG00000003034	ENSOANG00000000356	ENSOANG00000043763	ENSOANG00000046749	ENSOANG00000036091	SEPHS2 (ENSOANG00000050756)	IKBKG (ENSOANG00000000364)	G6PD (ENSOANG00000000365)	ENSOANG00000000366	ENSOANG00000011544	FAM3A (ENSOANG00000047703) ##22	SLC10A3 (ENSOANG00000043297)	UBL4A (ENSOANG00000048880)	PLXNA3 (ENSOANG00000007979)	ENSOANG00000004116	GDI1 (ENSOANG00000042523)	ENSOANG00000050800	TAFAZZIN (ENSOANG00000012765)	ENSOANG00000049949	ENSOANG00000011014	ENSOANG00000011015	FLNA (ENSOANG00000011016)	ENSOANG00000036188	ENSOANG00000011019	ENSOANG00000011020	TKTL2 (ENSOANG00000045224)
Sauria	ANCESTRAL SPECIES	80																ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.t	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.s.a	ENSGT00940000153588.b
Archelosauria	ANCESTRAL SPECIES	109																ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802
Cryptodira	ANCESTRAL SPECIES	140																ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802
Testudinoidea	ANCESTRAL SPECIES	51	ENSGT01060000248768	ENSGT00940000154471.a.a	ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000018621	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a.g	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000165180	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Emydidae	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b ##22
painted turtle	MODERN SPECIES	1100		ATP2B3 (ENSCPBG00000014832)	CCNQ (ENSCPBG00000015958)	DUSP9 (ENSCPBG00000015962)	FLNA (ENSCPBG00000015968)	ENSCPBG00000015988	ENSCPBG00000015995	DNASE1L1 (ENSCPBG00000015997)	TAFAZZIN (ENSCPBG00000016003)	ATP6AP1 (ENSCPBG00000016015)	GDI1 (ENSCPBG00000016047)	ENSCPBG00000017165	ENSCPBG00000017169	ENSCPBG00000017177	ENSCPBG00000017179	FAM3A (ENSCPBG00000017182) ##22	UBL4A (ENSCPBG00000017185)	ENSCPBG00000017187	ENSCPBG00000017191	ENSCPBG00000017205	G6PD (ENSCPBG00000017207)	IKBKG (ENSCPBG00000017209)	SEPHS2 (ENSCPBG00000017210)	ENSCPBG00000017211	ENSCPBG00000017213	ENSCPBG00000017215	ENSCPBG00000017216	ENSCPBG00000017217	ENSCPBG00000017218	IDH3G (ENSCPBG00000017224)	L1CAM (ENSCPBG00000017650)
Testudinidae	ANCESTRAL SPECIES	82			ENSGT00940000155311.C	ENSGT00940000160765	ENSGT00940000155445	ENSGT00940000161880	ENSGT00390000003937	ENSGT00940000153588.b	ENSGT00390000003897.s.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00950000182846.a.a.a.a.a	ENSGT00940000156650	ENSGT00950000182994.B.a.a.a	ENSGT00390000004735.C	ENSGT01050000244850.A.a.g	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022	ENSGT00410000025802	ENSGT00940000165180.g	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a
Abingdon island giant tortoise	MODERN SPECIES	584																FAM3A (ENSCABG00000001400) ##22	SLC10A3 (ENSCABG00000001402)	UBL4A (ENSCABG00000001404)	ENSCABG00000001405	ENSCABG00000001413	ENSCABG00000001605	G6PD (ENSCABG00000001607)	IKBKG (ENSCABG00000001611)	SEPHS2 (ENSCABG00000001616)
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	17	FSHR (ENSGEVG00005001085)	STON1 (ENSGEVG00005001161)	PPP1R21 (ENSGEVG00005001229)	FOXN2 (ENSGEVG00005001264)	FBXO11 (ENSGEVG00005001345)	MSH6 (ENSGEVG00005001536)	ENSGEVG00005001560	EML6 (ENSGEVG00005001611)	RTN4 (ENSGEVG00005001708)	CLHC1 (ENSGEVG00005001797)	RPS27A (ENSGEVG00005001865)	MTIF2 (ENSGEVG00005001889)	ENSGEVG00005001931	ENSGEVG00005001946	ENSGEVG00005001964	ENSGEVG00005001977 ##22	ENSGEVG00005002006	ENSGEVG00005002037	CCDC88A (ENSGEVG00005002288)	CFAP36 (ENSGEVG00005002807)	ENSGEVG00005002841	PNPT1 (ENSGEVG00005002898)	EFEMP1 (ENSGEVG00005002929)	CCDC85A (ENSGEVG00005002960)	VRK2 (ENSGEVG00005002982)	FANCL (ENSGEVG00005003009)	BCL11A (ENSGEVG00005003042)	PAPOLG (ENSGEVG00005003061)	REL (ENSGEVG00005003074)	PUS10 (ENSGEVG00005003095)	PEX13 (ENSGEVG00005003121)
Goode s thornscrub tortoise	MODERN SPECIES	67																ENSGEVG00005012377 ##22
Goode s thornscrub tortoise	MODERN SPECIES	208										ATP6AP1 (ENSGEVG00005018411)	GDI1 (ENSGEVG00005018455)	ENSGEVG00005018472	ENSGEVG00005018491	ENSGEVG00005014046	ENSGEVG00005014125	ENSGEVG00005014169 ##22	SLC10A3 (ENSGEVG00005014243)	UBL4A (ENSGEVG00005014261)	ENSGEVG00005014282	ENSGEVG00005014307	ENSGEVG00005014400	G6PD (ENSGEVG00005014601)	IKBKG (ENSGEVG00005014647)
Chinese turtle	MODERN SPECIES	591															ENSPSIG00000013041	FAM3A (ENSPSIG00000013122) ##22	SLC10A3 (ENSPSIG00000013723)
Archosauria	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b ##22
Aves	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b ##22
Neognathae	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b ##22
Neognathae_b	ANCESTRAL SPECIES	88													ENSGT00940000156650	ENSGT00390000004735.C	ENSGT00730000111022	ENSGT00950000183004.a.a.a.b ##22
Neognathae_c	ANCESTRAL SPECIES	92													ENSGT00940000156650	ENSGT00390000004735.C	ENSGT00730000111022	ENSGT00950000183004.a.a.a.b ##22
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	27	GRIPAP1 (ENSSHBG00005007370)	ENSSHBG00005007409	PDZD4 (ENSSHBG00005007435)	L1CAM (ENSSHBG00005007471)	SSR4 (ENSSHBG00005007493)	IDH3G (ENSSHBG00005007512)	SRPK3 (ENSSHBG00005007575)	OTUD5 (ENSSHBG00005007642)	ENSSHBG00005007668	CCDC120 (ENSSHBG00005007693)	MECP2 (ENSSHBG00005007709)	SYP (ENSSHBG00005007854)	ATP6AP1 (ENSSHBG00005007878)	ENSSHBG00005007944	UBL4A (ENSSHBG00005007963)	ENSSHBG00005007974 ##22	ENSSHBG00005008000	GATA1 (ENSSHBG00005008065)	ENSSHBG00005008057	PORCN (ENSSHBG00005008085)	SLC35A2 (ENSSHBG00005008109)	ENSSHBG00005008129	SEPHS2 (ENSSHBG00005008143)	ENSSHBG00005008159	IKBKG (ENSSHBG00005008187)	ENSSHBG00005008249	ENSSHBG00005008388 ##22	ENSSHBG00005008400	ENSSHBG00005008422	WDR45 (ENSSHBG00005008450)	ENSSHBG00005008463
Kakapo	MODERN SPECIES	27												ENSSHBG00005008463	WDR45 (ENSSHBG00005008450)	ENSSHBG00005008422	ENSSHBG00005008400	ENSSHBG00005008388 ##22	ENSSHBG00005008249	IKBKG (ENSSHBG00005008187)	ENSSHBG00005008159	SEPHS2 (ENSSHBG00005008143)	ENSSHBG00005008129	SLC35A2 (ENSSHBG00005008109)	PORCN (ENSSHBG00005008085)	ENSSHBG00005008057	GATA1 (ENSSHBG00005008065)	ENSSHBG00005008000	ENSSHBG00005007974 ##22	UBL4A (ENSSHBG00005007963)	ENSSHBG00005007944	ATP6AP1 (ENSSHBG00005007878)	SYP (ENSSHBG00005007854)
Passeriformes	ANCESTRAL SPECIES	116													ENSGT00940000156650	ENSGT00390000004735.C	ENSGT00730000111022	ENSGT00950000183004.a.a.a.b ##22
Passeriformes_d	ANCESTRAL SPECIES	114													ENSGT00940000156650	ENSGT00390000004735.C	ENSGT00730000111022	ENSGT00950000183004.a.a.a.b ##22
Passeriformes_g	ANCESTRAL SPECIES	124													ENSGT00940000156650	ENSGT00390000004735.C	ENSGT00730000111022	ENSGT00950000183004.a.a.a.b ##22
Passeroidea	ANCESTRAL SPECIES	131													ENSGT00940000156650	ENSGT00390000004735.C	ENSGT00730000111022	ENSGT00950000183004.a.a.a.b ##22
Zebra finch	MODERN SPECIES	38	ENSTGUG00000016898	OTUB1 (ENSTGUG00000025728)	ENSTGUG00000019325	STIP1 (ENSTGUG00000027054)	ENSTGUG00000028623	ENSTGUG00000028505	ENSTGUG00000025619	ENSTGUG00000028372	ENSTGUG00000026874	ENSTGUG00000029095	ENSTGUG00000028272	ENSTGUG00000023922	ENSTGUG00000026572	ENSTGUG00000029513	ENSTGUG00000019505	ENSTGUG00000029591 ##22	ENSTGUG00000024536	ENSTGUG00000029170	ENSTGUG00000023778	ENSTGUG00000022156	ENSTGUG00000023191	ENSTGUG00000024744	ENSTGUG00000028554	ENSTGUG00000019119	ENSTGUG00000028864	ENSTGUG00000025548	ENSTGUG00000019270	WDR45 (ENSTGUG00000023573)	ENSTGUG00000019637	PLP2 (ENSTGUG00000026260)	FTSJ1 (ENSTGUG00000028610)
Lepidosauria	ANCESTRAL SPECIES	38	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00900000142661.a	ENSGT00940000156319	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022.m	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.t	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a
Episquamata	ANCESTRAL SPECIES	23									ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022.m	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.t	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000153629.a.b	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022.m	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.t	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a
Elapidae	ANCESTRAL SPECIES	21	ENSGT00940000153629.a.b	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980.a	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319.l	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022.m	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.t	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00950000182955.a.b.a
Elapidae_a	ANCESTRAL SPECIES	23	ENSGT00940000153629.a.b	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980.a	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319.l	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022.m	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.t	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00950000182955.a.b.a.e
Acanthophiinae	ANCESTRAL SPECIES	23	ENSGT00940000153629.a.b	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980.a	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319.l	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022.m	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00950000182846.a.a.a.a.b	ENSGT00390000003897.t	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b.b	ENSGT00950000182955.a.b.a.e
Eastern brown snake	MODERN SPECIES	52	ENSPTXG00000007914	PRICKLE3 (ENSPTXG00000007910)	ALAS2 (ENSPTXG00000007906)	APEX2 (ENSPTXG00000007903)	PFKFB1 (ENSPTXG00000007895)	ENSPTXG00000007890	ITIH6 (ENSPTXG00000007849)	PHF8 (ENSPTXG00000007848)	WNK3 (ENSPTXG00000007846)	TSR2 (ENSPTXG00000007843)	FGD1 (ENSPTXG00000006759)	GNL3L (ENSPTXG00000006749)	HUWE1 (ENSPTXG00000006728)	ENSPTXG00000006712	ENSPTXG00000006711	FAM3A (ENSPTXG00000006710) ##22	SLC10A3 (ENSPTXG00000006709)	UBL4A (ENSPTXG00000006707)	ENSPTXG00000006706	PLXNA3 (ENSPTXG00000006595)	ENSPTXG00000006594	GDI1 (ENSPTXG00000006593)	ATP6AP1 (ENSPTXG00000006592)	TAFAZZIN (ENSPTXG00000006591)	DNASE1L1 (ENSPTXG00000006590)	ENSPTXG00000006589	ENSPTXG00000007999	IDH3G (ENSPTXG00000007998)	SRPK3 (ENSPTXG00000007997)	PLXNB3 (ENSPTXG00000005731)	ENSPTXG00000005713
Mainland tiger snake	MODERN SPECIES	81	PRICKLE3 (ENSNSUG00000019767)	ALAS2 (ENSNSUG00000019765)	APEX2 (ENSNSUG00000019753)	PFKFB1 (ENSNSUG00000019752)	ENSNSUG00000019751	ITIH6 (ENSNSUG00000019750)	PHF8 (ENSNSUG00000019749)	FAM120C (ENSNSUG00000019748)	WNK3 (ENSNSUG00000019747)	TSR2 (ENSNSUG00000019746)	FGD1 (ENSNSUG00000019745)	GNL3L (ENSNSUG00000019744)	HUWE1 (ENSNSUG00000018906)	ENSNSUG00000018905	ENSNSUG00000015779	FAM3A (ENSNSUG00000015740) ##22	SLC10A3 (ENSNSUG00000015739)	UBL4A (ENSNSUG00000015738)	ENSNSUG00000015737	ENSNSUG00000015736	ENSNSUG00000015735	ENSNSUG00000015733	GDI1 (ENSNSUG00000015732)	ATP6AP1 (ENSNSUG00000015714)	TAFAZZIN (ENSNSUG00000015706)	DNASE1L1 (ENSNSUG00000015705)	ENSNSUG00000015704	ENSNSUG00000015702	IDH3G (ENSNSUG00000015701)	SRPK3 (ENSNSUG00000015700)	ENSNSUG00000015699
Blue-lipped sea krait	MODERN SPECIES	10826																FAM3A (ENSLLTG00000007258) ##22
Indian cobra	MODERN SPECIES	1	APEX2 (ENSNNAG00000011774)	PFKFB1 (ENSNNAG00000011906)	NSMCE3 (ENSNNAG00000013747)	ENSNNAG00000013761	ENSNNAG00000013810	PHF8 (ENSNNAG00000013830)	FAM120C (ENSNNAG00000013861)	WNK3 (ENSNNAG00000013960)	TSR2 (ENSNNAG00000014165)	FGD1 (ENSNNAG00000014192)	ENSNNAG00000014231	GNL3L (ENSNNAG00000014245)	HUWE1 (ENSNNAG00000014942)	ENSNNAG00000018596	ENSNNAG00000018634	FAM3A (ENSNNAG00000018651) ##22	SLC10A3 (ENSNNAG00000018658)	UBL4A (ENSNNAG00000018662)	ENSNNAG00000018664	ENSNNAG00000018666	ENSNNAG00000018668	ENSNNAG00000018671	GDI1 (ENSNNAG00000018677)	ATP6AP1 (ENSNNAG00000018685)	TAFAZZIN (ENSNNAG00000018691)	DNASE1L1 (ENSNNAG00000018696)	ENSNNAG00000018704	IDH3G (ENSNNAG00000018712)	ENSNNAG00000018721	ENSNNAG00000018733	ENSNNAG00000018745
Lizard	MODERN SPECIES		ENSACAG00000011664	ENSACAG00000041739	ENSACAG00000011814	PHF8 (ENSACAG00000011904)	FAM120C (ENSACAG00000012139)	WNK3 (ENSACAG00000012261)	TSR2 (ENSACAG00000012270)	FGD1 (ENSACAG00000012290)	GNL3L (ENSACAG00000012525)	ENSACAG00000042765	ENSACAG00000036892	ENSACAG00000004234	ENSACAG00000023284	ENSACAG00000004622	ENSACAG00000004854	FAM3A (ENSACAG00000004999) ##22	SLC10A3 (ENSACAG00000005038)	UBL4A (ENSACAG00000043371)	ENSACAG00000034714	PLXNA3 (ENSACAG00000005063)	ENSACAG00000005285	CCN2 (ENSACAG00000000985)	ENPP1 (ENSACAG00000001235)	ENPP3 (ENSACAG00000001394)	MED23 (ENSACAG00000001630)	ENSACAG00000001836	ENSACAG00000040502	AKAP7 (ENSACAG00000001820)	FUCA2 (ENSACAG00000008062)	PEX3 (ENSACAG00000008093)	ADAT2 (ENSACAG00000028361)
Laterata	ANCESTRAL SPECIES	7	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162980	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319	ENSGT00940000165056	ENSGT00940000164196	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b	ENSGT00730000111022.m	ENSGT00410000025802	ENSGT01050000244850.A.a	ENSGT00390000004735.C	ENSGT00950000182994.B.a.a.a	ENSGT00940000156650	ENSGT00390000018621	ENSGT00950000182846.a.a.a.a.a	ENSGT00390000003897.t	ENSGT00950000182989.D.a.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00390000011863.c
Argentine black and white tegu	MODERN SPECIES	12	ALAS2 (ENSSMRG00000019208)	PRICKLE3 (ENSSMRG00000019206)	ENSSMRG00000019205	ENSSMRG00000019204	ITIH6 (ENSSMRG00000019135)	PHF8 (ENSSMRG00000019134)	FAM120C (ENSSMRG00000019133)	SSR4 (ENSSMRG00000019131)	WNK3 (ENSSMRG00000019129)	TSR2 (ENSSMRG00000019128)	FGD1 (ENSSMRG00000019064)	GNL3L (ENSSMRG00000019063)	HUWE1 (ENSSMRG00000003040)	ENSSMRG00000002927	ENSSMRG00000002878	FAM3A (ENSSMRG00000002877) ##22	SLC10A3 (ENSSMRG00000002876)	UBL4A (ENSSMRG00000002875)	ENSSMRG00000002873	PLXNA3 (ENSSMRG00000002851)	ENSSMRG00000002783	GDI1 (ENSSMRG00000002779)	ATP6AP1 (ENSSMRG00000002776)	TAFAZZIN (ENSSMRG00000002769)	DNASE1L1 (ENSSMRG00000002768)	ENSSMRG00000002764	IDH3G (ENSSMRG00000002761)	SRPK3 (ENSSMRG00000002758)	PLXNB3 (ENSSMRG00000002754)	ABCD1 (ENSSMRG00000002654)	BCAP31 (ENSSMRG00000002653)
tuatara	MODERN SPECIES	1922	ENSSPUG00000019282	ENSSPUG00000019283	ENSSPUG00000019284	FGD1 (ENSSPUG00000019285)	TSR2 (ENSSPUG00000019286)	WNK3 (ENSSPUG00000019287)	ENSSPUG00000019289	ENSSPUG00000019290	ENSSPUG00000019291	ENSSPUG00000019292	ENSSPUG00000019293	ENSSPUG00000019294	ENSSPUG00000019295	ENSSPUG00000019296	ENSSPUG00000019297	FAM3A (ENSSPUG00000019298) ##22	UBL4A (ENSSPUG00000019300)
Anura	ANCESTRAL SPECIES	349												ENSGT00940000157688	ENSGT00390000000950.c.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b ##22	ENSGT00950000182808.b.b
Leishan spiny toad	MODERN SPECIES	12	DNM1 (ENSLLEG00000017784)	ENSLLEG00000017018	SWI5 (ENSLLEG00000016918)	SLC27A4 (ENSLLEG00000016704)	ENSLLEG00000016669	URM1 (ENSLLEG00000016442)	CERCAM (ENSLLEG00000016257)	ENSLLEG00000016194	ENSLLEG00000016081	UBL4A (ENSLLEG00000016036)	INVS (ENSLLEG00000016022)	SEPHS2 (ENSLLEG00000015607)	IKBKG (ENSLLEG00000015465)	G6PD (ENSLLEG00000015353)	ENSLLEG00000015095	FAM3A (ENSLLEG00000014889) ##22	SLC10A3 (ENSLLEG00000014858)	ENSLLEG00000014813	ENSLLEG00000014764	ENSLLEG00000014614	ENSLLEG00000014573	SLC25A25 (ENSLLEG00000013895)	NAIF1 (ENSLLEG00000013823)	ENSLLEG00000013808	EEIG1 (ENSLLEG00000013673)	ENSLLEG00000013623	DPM2 (ENSLLEG00000013518)	PIP5KL1 (ENSLLEG00000013344)	PTRH1 (ENSLLEG00000013276)	ENSLLEG00000013224	ENSLLEG00000013192
Frog	MODERN SPECIES	8	gpr173 (ENSXETG00000047010)	foxp3 (ENSXETG00000031498)	ccdc22 (ENSXETG00000007193)	cacna1f (ENSXETG00000007195)	ENSXETG00000035113	ENSXETG00000048935	XB997834 [provisional] (ENSXETG00000036168)	cercam (ENSXETG00000009835)	urm1 (ENSXETG00000042358)	slc27a4 (ENSXETG00000037018)	invs (ENSXETG00000023058)	sephs3 (ENSXETG00000045518)	ikbkg (ENSXETG00000031817)	g6pd (ENSXETG00000033535)	XB5892679 [provisional:cerk] (ENSXETG00000030525)	fam3a (ENSXETG00000023067) ##22	slc10a3 (ENSXETG00000030360)	ENSXETG00000036637	fam102a (ENSXETG00000023071)	ENSXETG00000035221	ENSXETG00000042722	fgd1 (ENSXETG00000030283)	tsr2 (ENSXETG00000033574)	wnk3 (ENSXETG00000023082)	fam120c (ENSXETG00000023084)	huwe1 (ENSXETG00000030011)	phf8 (ENSXETG00000022032)	itih6 (ENSXETG00000030443)	nsmce3 (ENSXETG00000022031)	pfkfb1 (ENSXETG00000022029)	alas2 (ENSXETG00000022017)
Coelacanth	MODERN SPECIES	599																FAM3A (ENSLACG00000001901) ##22	WNK3 (ENSLACG00000004553)	HUWE1 (ENSLACG00000010403)	ENSLACG00000012574	PHF8 (ENSLACG00000013043)	FAM120C (ENSLACG00000013899)	ENSLACG00000014374	acot22 (ENSLACG00000014780)	ENSLACG00000015069	HSD17B10 (ENSLACG00000015434)	ENSLACG00000015571	TAFAZZIN (ENSLACG00000015740)	ENSLACG00000015838	ENSLACG00000015955
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.a.b ##22
Hagfish	MODERN SPECIES	1429																fam3a (ENSEBUG00000013606) ##22	ENSEBUG00000014769	ENSEBUG00000007328	ENSEBUG00000009477	ENSEBUG00000009514	ENSEBUG00000001571	ENSEBUG00000011890	ENSEBUG00000016187	ENSEBUG00000008465
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.b ##22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.b ##22
Gnathostomata	ANCESTRAL SPECIES	45	ENSGT00940000155820	ENSGT00940000156409	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00940000173126	ENSGT01030000234637.b.d	ENSGT00940000153456.b.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869
Euteleostomi	ANCESTRAL SPECIES	9	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT01030000234637.b.d.a.a	ENSGT00940000153456.b.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a	ENSGT00940000160985	ENSGT00940000157869	ENSGT00940000155146	ENSGT00390000017669	ENSGT00530000065109	ENSGT00510000048121	ENSGT00510000047225	ENSGT00950000182846.a.a.a.b	ENSGT00390000003224.A	ENSGT00940000156286	ENSGT00940000157660	ENSGT00390000005529.a	ENSGT00940000156297	ENSGT00940000157205
Actinopterygii	ANCESTRAL SPECIES	14	ENSGT00940000153629.a.a	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT01030000234637.b.d.a.a	ENSGT00940000153456.b.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000156378.a.b	ENSGT00940000157448	ENSGT00390000018321	ENSGT00940000159273	ENSGT00940000158320	ENSGT00390000003017.c.a	ENSGT00390000013390	ENSGT00940000157928	ENSGT00940000156494	ENSGT00940000153541.D	ENSGT00390000007084	ENSGT00940000157262
Neopterygii	ANCESTRAL SPECIES	59	ENSGT00940000166173	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT00940000173126	ENSGT00390000003322	ENSGT01030000234637.b.d.b	ENSGT01030000234637.b.d.a.a	ENSGT00940000153456.b.b	ENSGT00590000083094.a.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048	ENSGT00510000047967	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00940000157448	ENSGT00390000018321	ENSGT00940000159273	ENSGT00940000158320	ENSGT00390000003017.c.a	ENSGT00390000013390	ENSGT00940000157928	ENSGT00940000156494
Osteoglossocephalai	ANCESTRAL SPECIES	160													ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.a	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000156378.a.b	ENSGT00940000157448	ENSGT00390000018321	ENSGT00940000159273	ENSGT00940000158320	ENSGT00390000003017.c.a	ENSGT00550000074884	ENSGT00940000157304	ENSGT00940000165342	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000154899.fb.a
Osteoglossiformes	ANCESTRAL SPECIES	54	ENSGT01030000234549.a.a.a.a.a.b.b.a	ENSGT00940000156409	ENSGT00940000153629.a.a.b	ENSGT00940000166173	ENSGT00510000046608.B.s	ENSGT00940000157279.i	ENSGT00390000002873	ENSGT00940000173126	ENSGT01030000234637.b.d.a.a.a	ENSGT00940000153456.b.b	ENSGT00590000083094.a.a.c.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048.d.a	ENSGT00510000047967	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.a	ENSGT00390000014429.a	ENSGT00940000156378.b	ENSGT00390000018321	ENSGT00940000159273	ENSGT00390000003017.c.a.c	ENSGT00940000154899.fb.a	ENSGT00940000153709.A.e	ENSGT00530000063557.a	ENSGT00950000182824.a.b.a.g	ENSGT00390000011230	ENSGT01050000244882.a.a.b.a.b	ENSGT00940000158855	ENSGT00940000158328	ENSGT01030000234595.B.c.a.e
P. kingsleyae	MODERN SPECIES	49	ADAMTS9 (ENSPKIG00000023235)	prickle2b (ENSPKIG00000023283)	psmd6 (ENSPKIG00000023314)	ATXN7 (ENSPKIG00000023335)	thoc7 (ENSPKIG00000023365)	ENSPKIG00000023394	SYNPR (ENSPKIG00000023412)	nampt2 (ENSPKIG00000023445)	ENSPKIG00000023548 ##17	ENSPKIG00000023698	fezf2 (ENSPKIG00000023711)	C3orf14 (ENSPKIG00000023719)	ptprga (ENSPKIG00000023745)	ENSPKIG00000023782	fhit (ENSPKIG00000023792)	ENSPKIG00000023813 ##22	FAM107A (ENSPKIG00000023826)
Asian bonytongue	MODERN SPECIES	14	magi1b (ENSSFOG00015017375)	rho (ENSSFOG00015017939)	ADAMTS9 (ENSSFOG00015017953)	prickle2b (ENSSFOG00015030418)	slc2a9l1 (ENSSFOG00015018103)	psmd6 (ENSSFOG00015018135)	ATXN7 (ENSSFOG00015018162)	thoc7 (ENSSFOG00015018204)	SYNPR (ENSSFOG00015018227)	nampt2 (ENSSFOG00015018243)	ENSSFOG00015018359 ##17	fezf2 (ENSSFOG00015018740)	ENSSFOG00015018799	ptprga (ENSSFOG00015018812)	fhit (ENSSFOG00015018887)	ENSSFOG00015018952 ##22	FAM107A (ENSSFOG00015018963)	ccdc3b (ENSSFOG00015031083)	CAMK1 (ENSSFOG00015019005)	spcs1 (ENSSFOG00015029632)	glt8d1 (ENSSFOG00015031666)	PBRM1 (ENSSFOG00015019102)	KCNB1 (ENSSFOG00015032748)	PTGIS (ENSSFOG00015019198)	thumpd3 (ENSSFOG00015019210)	SRGAP3 (ENSSFOG00015019228)	rad18 (ENSSFOG00015019264)	oxtra (ENSSFOG00015019284)	cav3 (ENSSFOG00015029136)	ENSSFOG00015019306	parp3 (ENSSFOG00015019314)
Clupeocephala	ANCESTRAL SPECIES	18	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT01100000263542.B.a	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.d	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000158328	ENSGT00940000154899.gb	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT01030000234595.B.c.a.d
Euteleosteomorpha	ANCESTRAL SPECIES	256												ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000158328	ENSGT00940000154899.gb	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a
Acanthomorphata	ANCESTRAL SPECIES	6	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Euacanthomorphacea	ANCESTRAL SPECIES	1	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Percomorphaceae	ANCESTRAL SPECIES	1	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Tiger tail seahorse	MODERN SPECIES	460	SLC2A11 (ENSHCOG00000017703)	tgfa (ENSHCOG00000017712)	ENSHCOG00000017718	trub2 (ENSHCOG00000017748)	ENSHCOG00000017776	srsf3a (ENSHCOG00000017795)	fkbp5 (ENSHCOG00000017809)	slc6a22.1 (ENSHCOG00000017840)	slc6a22.2 (ENSHCOG00000017881)	ENSHCOG00000017899	opn1mw1 (ENSHCOG00000017910)	synprb (ENSHCOG00000017944)	ENSHCOG00000018022 ##17	PTPRG (ENSHCOG00000018143)	ENSHCOG00000018188	ENSHCOG00000018205 ##22	CAMK1 (ENSHCOG00000018224)	pbrm1l (ENSHCOG00000018411)	stau1 (ENSHCOG00000018461)	ENSHCOG00000018473	KCNB1 (ENSHCOG00000018482)	ptgis (ENSHCOG00000018498)	SRGAP3 (ENSHCOG00000018857)	OXTR (ENSHCOG00000018896)	cav4a (ENSHCOG00000018903)	rrp9 (ENSHCOG00000018967)	grm2b (ENSHCOG00000018988)
Percomorphaceae_B	ANCESTRAL SPECIES	3	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Percomorphaceae_C	ANCESTRAL SPECIES	1	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Eupercaria	ANCESTRAL SPECIES		ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Tetraodontidae	ANCESTRAL SPECIES	1	ENSGT00940000159296	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a
Fugu	MODERN SPECIES	10	tgfa (ENSTRUG00000024683)	hdhd3 (ENSTRUG00000033187)	trub2 (ENSTRUG00000015499)	ENSTRUG00000022896	srsf3a (ENSTRUG00000023965)	fkbp5 (ENSTRUG00000015512)	slc6a22.1 (ENSTRUG00000028380)	slc6a22.1 (ENSTRUG00000032801)	slc6a22.2 (ENSTRUG00000003053)	slc6a22.2 (ENSTRUG00000003335)	ENSTRUG00000002306	ENSTRUG00000002372	synprb (ENSTRUG00000003258)	ENSTRUG00000003536 ##17	PTPRG (ENSTRUG00000004636)	ENSTRUG00000024993 ##22	ENSTRUG00000021663	CAMK1 (ENSTRUG00000005116)	pbrm1l (ENSTRUG00000005335)	stau1 (ENSTRUG00000005837)	ENSTRUG00000006351	KCNB1 (ENSTRUG00000006520)	ptgis (ENSTRUG00000006596)	SRGAP3 (ENSTRUG00000006997)	OXTR (ENSTRUG00000007606)	cav4a (ENSTRUG00000007707)	ENSTRUG00000021435	rrp9 (ENSTRUG00000007858)	grm2b (ENSTRUG00000007956)	TEX264 (ENSTRUG00000020425)	ENSTRUG00000008247
Eupecaria_A	ANCESTRAL SPECIES		ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Ballan wrasse	MODERN SPECIES	22														ENSLBEG00000019560 ##17	PTPRG (ENSLBEG00000019629)	ENSLBEG00000019817 ##22	ENSLBEG00000019842	CAMK1 (ENSLBEG00000019877)	pbrm1l (ENSLBEG00000019996)	stau1 (ENSLBEG00000020172)	ENSLBEG00000020222	ENSLBEG00000020255	KCNB1 (ENSLBEG00000020282)	ptgis (ENSLBEG00000020301)	SRGAP3 (ENSLBEG00000020365)	OXTR (ENSLBEG00000020536)	cav4a (ENSLBEG00000020549)	ENSLBEG00000020573	rrp9 (ENSLBEG00000020591)	grm2b (ENSLBEG00000020644)	TEX264 (ENSLBEG00000020741)
Eupecaria_B	ANCESTRAL SPECIES	2	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Perciformes	ANCESTRAL SPECIES		ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Cottioidei	ANCESTRAL SPECIES		ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Lumpfish	MODERN SPECIES	20	tgfa (ENSCLMG00005014520)	hdhd3 (ENSCLMG00005014522)	trub2 (ENSCLMG00005014524)	ENSCLMG00005014529	srsf3a (ENSCLMG00005014530)	fkbp5 (ENSCLMG00005014532)	slc6a22.1 (ENSCLMG00005014566)	slc6a22.2 (ENSCLMG00005017409)	ENSCLMG00005017578	ENSCLMG00005017597	ENSCLMG00005017605	synprb (ENSCLMG00005017658)	ENSCLMG00005017692 ##17	PTPRG (ENSCLMG00005017865)	ENSCLMG00005018393	ENSCLMG00005018394 ##22	ENSCLMG00005018395	CAMK1 (ENSCLMG00005018396)	pbrm1l (ENSCLMG00005018411)	stau1 (ENSCLMG00005018555)	ENSCLMG00005018559	ENSCLMG00005018561	ENSCLMG00005018563	KCNB1 (ENSCLMG00005018567)	ptgis (ENSCLMG00005018568)	SRGAP3 (ENSCLMG00005018577)	OXTR (ENSCLMG00005018605)	cav4a (ENSCLMG00005018606)	ENSCLMG00005018607	rrp9 (ENSCLMG00005018612)	grm2b (ENSCLMG00005018641)
Perciformes_a	ANCESTRAL SPECIES	5	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.gb	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Channel bull blenny	MODERN SPECIES	19	tgfa (ENSCGOG00000013849)	hdhd3 (ENSCGOG00000013846)	trub2 (ENSCGOG00000013841)	ENSCGOG00000013836	srsf3a (ENSCGOG00000013827)	fkbp5 (ENSCGOG00000013303)	slc6a22.1 (ENSCGOG00000013045)	slc6a22.2 (ENSCGOG00000009909)	ENSCGOG00000008811	ENSCGOG00000008512	synprb (ENSCGOG00000008490)	ENSCGOG00000003906 ##17	PTPRG (ENSCGOG00000002828)	ENSCGOG00000002649	ENSCGOG00000002623	ENSCGOG00000009770 ##22	FAM107A (ENSCGOG00000009764)	CAMK1 (ENSCGOG00000007260)	pbrm1l (ENSCGOG00000006523)	stau1 (ENSCGOG00000006396)	ENSCGOG00000006350	ENSCGOG00000006338	KCNB1 (ENSCGOG00000006337)	ptgis (ENSCGOG00000006278)	SRGAP3 (ENSCGOG00000004386)	OXTR (ENSCGOG00000004308)	cav4a (ENSCGOG00000004305)	ENSCGOG00000004301	rrp9 (ENSCGOG00000004011)	grm2b (ENSCGOG00000004002)	TEX264 (ENSCGOG00000003999)
Pike perch	MODERN SPECIES	73	SLC2A11 (ENSSLUG00000017824)	tgfa (ENSSLUG00000017819)	hdhd3 (ENSSLUG00000017817)	trub2 (ENSSLUG00000017813)	ENSSLUG00000017808	srsf3a (ENSSLUG00000017804)	ENSSLUG00000017802	fkbp5 (ENSSLUG00000017747)	slc6a22.1 (ENSSLUG00000015066)	slc6a22.2 (ENSSLUG00000014859)	ENSSLUG00000014813	synprb (ENSSLUG00000014798)	ENSSLUG00000013930 ##17	PTPRG (ENSSLUG00000010937)	cfap20dc (ENSSLUG00000010785)	ENSSLUG00000010769 ##22	FAM107A (ENSSLUG00000010766)	CAMK1 (ENSSLUG00000008510)	pbrm1l (ENSSLUG00000007847)	ENSSLUG00000007798
Eupecaria_C	ANCESTRAL SPECIES		ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Gilthead seabream	MODERN SPECIES	20	SLC2A11 (ENSSAUG00010021332)	tgfa (ENSSAUG00010021324)	hdhd3 (ENSSAUG00010021323)	trub2 (ENSSAUG00010021321)	ENSSAUG00010021320	srsf3a (ENSSAUG00010021319)	fkbp5 (ENSSAUG00010021302)	slc6a22.1 (ENSSAUG00010021239)	slc6a22.2 (ENSSAUG00010020171)	ENSSAUG00010020148	ENSSAUG00010020129	synprb (ENSSAUG00010020127)	ENSSAUG00010014963 ##17	PTPRG (ENSSAUG00010014428)	cfap20dc (ENSSAUG00010014413)	ENSSAUG00010014409 ##22	FAM107A (ENSSAUG00010014408)	CAMK1 (ENSSAUG00010012768)	pbrm1l (ENSSAUG00010003714)	stau1 (ENSSAUG00010003501)	ENSSAUG00010003491	ENSSAUG00010003487	KCNB1 (ENSSAUG00010003485)	ptgis (ENSSAUG00010003471)	SRGAP3 (ENSSAUG00010000587)	OXTR (ENSSAUG00010000360)	cav3 (ENSSAUG00010000355)	cav4a (ENSSAUG00010000351)	rrp9 (ENSSAUG00010000336)	grm2b (ENSSAUG00010000316)	ENSSAUG00010000299
Eupercaria_incertae_sedis	ANCESTRAL SPECIES		ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379.h	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Large yellow croaker	MODERN SPECIES	478	SLC2A11 (ENSLCRG00005023813)	tgfa (ENSLCRG00005023814)	hdhd3 (ENSLCRG00005023815)	trub2 (ENSLCRG00005023816)	ENSLCRG00005023817	srsf3a (ENSLCRG00005023818)	fkbp5 (ENSLCRG00005023820)	slc6a22.1 (ENSLCRG00005023829)	slc6a22.2 (ENSLCRG00005023835)	ENSLCRG00005023836	ENSLCRG00005023837	synprb (ENSLCRG00005023839)	ENSLCRG00005023840 ##17	PTPRG (ENSLCRG00005000378)	cfap20dc (ENSLCRG00005005625)	ENSLCRG00005005628 ##22	FAM107A (ENSLCRG00005005631)	CAMK1 (ENSLCRG00005005644)	pbrm1l (ENSLCRG00005006349)	stau1 (ENSLCRG00005012188)	ENSLCRG00005012267	ENSLCRG00005012285	KCNB1 (ENSLCRG00005012288)	ptgis (ENSLCRG00005012296)	SRGAP3 (ENSLCRG00005012334)	OXTR (ENSLCRG00005017752)	cav3 (ENSLCRG00005017754)	cav4a (ENSLCRG00005017756)	ENSLCRG00005017757	rrp9 (ENSLCRG00005017760)	grm2b (ENSLCRG00005017768)
European seabass	MODERN SPECIES	10	ENSDLAG00005023244	fkbp5 (ENSDLAG00005031856)	slc6a22.1 (ENSDLAG00005033698)	slc6a22.2 (ENSDLAG00005028850)	ENSDLAG00005003100	ENSDLAG00005019649	ENSDLAG00005030434	slc6a22.1 (ENSDLAG00005032723)	ENSDLAG00005018127	ENSDLAG00005020236	synprb (ENSDLAG00005032345)	ENSDLAG00005011156	ENSDLAG00005011443 ##17	PTPRG (ENSDLAG00005018629)	cfap20dc (ENSDLAG00005020705)	ENSDLAG00005020713 ##22	FAM107A (ENSDLAG00005018013)	ENSDLAG00005020763	pbrm1l (ENSDLAG00005021862)	ENSDLAG00005022190	ENSDLAG00005022207	ENSDLAG00005022209	ptgis (ENSDLAG00005022212)	ENSDLAG00005022263	ENSDLAG00005023113	cav4a (ENSDLAG00005030654)	ENSDLAG00005023122	rrp9 (ENSDLAG00005023132)	grm2b (ENSDLAG00005023208)	TEX264 (ENSDLAG00005023215)	GPX (ENSDLAG00005029761)
Percomorphaceae_D	ANCESTRAL SPECIES	3	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Anabantaria	ANCESTRAL SPECIES		ENSGT00940000159296	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
Anabantoidei	ANCESTRAL SPECIES	1	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.b.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
Climbing perch	MODERN SPECIES	18	hdhd3 (ENSATEG00000011364)	ENSATEG00000011371	ENSATEG00000011482	srsf3a (ENSATEG00000011511)	fkbp5 (ENSATEG00000011527)	slc6a22.1 (ENSATEG00000011540)	slc6a22.2 (ENSATEG00000011564)	ENSATEG00000027686	ENSATEG00000029137	ENSATEG00000027793	synprb (ENSATEG00000024507)	ENSATEG00000024512 ##17	ENSATEG00000024537	cfap20dc (ENSATEG00000024563)	ENSATEG00000029054	ENSATEG00000024569 ##22	ENSATEG00000024573	pbrm1l (ENSATEG00000024583)	stau1 (ENSATEG00000024600)	ENSATEG00000024607	ENSATEG00000024609	ptgis (ENSATEG00000024612)	ENSATEG00000024620	ENSATEG00000024633	cav4a (ENSATEG00000024636)	ENSATEG00000024638	rrp9 (ENSATEG00000024640)	grm2b (ENSATEG00000024646)	TEX264 (ENSATEG00000024648)	ENSATEG00000003931	ENSATEG00000029704
Siamese fighting fish	MODERN SPECIES	16	tgfa (ENSBSLG00000003369)	hdhd3 (ENSBSLG00000003370)	trub2 (ENSBSLG00000003373)	ENSBSLG00000003374	srsf3a (ENSBSLG00000003375)	fkbp5 (ENSBSLG00000003377)	slc6a22.1 (ENSBSLG00000003405)	slc6a22.2 (ENSBSLG00000003417)	ENSBSLG00000003418	ENSBSLG00000003420	synprb (ENSBSLG00000003422)	ENSBSLG00000003452 ##17	PTPRG (ENSBSLG00000003489)	ENSBSLG00000003497	ENSBSLG00000003498	ENSBSLG00000003501 ##22	CAMK1 (ENSBSLG00000008335)	pbrm1l (ENSBSLG00000009393)	stau1 (ENSBSLG00000009518)	KCNB1 (ENSBSLG00000009571)	ptgis (ENSBSLG00000009572)	SRGAP3 (ENSBSLG00000009662)	OXTR (ENSBSLG00000012650)	cav4a (ENSBSLG00000013039)	ENSBSLG00000013072	rrp9 (ENSBSLG00000013376)	grm2b (ENSBSLG00000014228)	TEX264 (ENSBSLG00000014251)	ENSBSLG00000014321	BRK1 (ENSBSLG00000014331)	rbm5 (ENSBSLG00000014358)
Carangaria	ANCESTRAL SPECIES	3	ENSGT00940000154388	ENSGT00940000166668	ENSGT00390000012071	ENSGT00940000159296	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Pleuronectoidei	ANCESTRAL SPECIES	4	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b.u.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a
Turbot	MODERN SPECIES	18	tgfa (ENSSMAG00000020829)	hdhd3 (ENSSMAG00000020823)	ENSSMAG00000020820	ENSSMAG00000033456	srsf3a (ENSSMAG00000020812)	fkbp5 (ENSSMAG00000020806)	slc6a22.1 (ENSSMAG00000020801)	slc6a22.2 (ENSSMAG00000020739)	RH2-A1 (ENSSMAG00000018072)	RH2-B1 (ENSSMAG00000018084)	RH2-B2 (ENSSMAG00000018144)	synprb (ENSSMAG00000022669)	ENSSMAG00000017781 ##17	ENSSMAG00000017683	cfap20dc (ENSSMAG00000017654)	ENSSMAG00000017637 ##22	ENSSMAG00000017597	pbrm1l (ENSSMAG00000017461)	stau1 (ENSSMAG00000017410)	ENSSMAG00000017385	ENSSMAG00000017363	ENSSMAG00000029776	ptgis (ENSSMAG00000017341)	SRGAP3 (ENSSMAG00000017241)	ENSSMAG00000017218	CAV3 (ENSSMAG00000017215)	cav4a (ENSSMAG00000017214)	ENSSMAG00000017213	rrp9 (ENSSMAG00000017210)	grm2b (ENSSMAG00000017164)	TEX264 (ENSSMAG00000017157)
Tongue sole	MODERN SPECIES	2	tgfa (ENSCSEG00000001356)	hdhd3 (ENSCSEG00000001353)	trub2 (ENSCSEG00000001331)	ENSCSEG00000001322	srsf3a (ENSCSEG00000001311)	fkbp5 (ENSCSEG00000001306)	slc6a22.1 (ENSCSEG00000001298)	slc6a22.1 (ENSCSEG00000001110)	slc6a22.2 (ENSCSEG00000001079)	ENSCSEG00000001078	ENSCSEG00000001074	synprb (ENSCSEG00000001065)	ENSCSEG00000000914 ##17	PTPRG (ENSCSEG00000000859)	cfap20dc (ENSCSEG00000000837)	ENSCSEG00000000831 ##22	CAMK1 (ENSCSEG00000000819)	pbrm1l (ENSCSEG00000000804)	stau1 (ENSCSEG00000000792)	ENSCSEG00000000785	KCNB1 (ENSCSEG00000000781)	ptgis (ENSCSEG00000000773)	SRGAP3 (ENSCSEG00000000715)	OXTR (ENSCSEG00000000683)	cav4a (ENSCSEG00000000668)	ENSCSEG00000000662	rrp9 (ENSCSEG00000000656)	grm2b (ENSCSEG00000000650)	TEX264 (ENSCSEG00000000643)	ENSCSEG00000000635	BRK1 (ENSCSEG00000000616)
Carangaria_A	ANCESTRAL SPECIES	7	ENSGT00940000158891	ENSGT00940000154388	ENSGT00390000012071	ENSGT00940000159296	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b.d	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Seriola	ANCESTRAL SPECIES	20	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.d	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.c	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b.d	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.B.f.b.b	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Yellowtail amberjack	MODERN SPECIES	2920	hdhd3 (ENSSLDG00000024696)	trub2 (ENSSLDG00000024701)	ENSSLDG00000024714	srsf3a (ENSSLDG00000024723)	fkbp5 (ENSSLDG00000024729)	slc6a22.1 (ENSSLDG00000024738)	slc6a22.2 (ENSSLDG00000024762)	ENSSLDG00000024793	ENSSLDG00000024797	ENSSLDG00000024799	ENSSLDG00000024804	synprb (ENSSLDG00000024813)	ENSSLDG00000024839 ##17	PTPRG (ENSSLDG00000024938)	cfap20dc (ENSSLDG00000024956)	ENSSLDG00000024962 ##22	ENSSLDG00000024971	CAMK1 (ENSSLDG00000024978)	pbrm1l (ENSSLDG00000025003)	stau1 (ENSSLDG00000025040)	ENSSLDG00000025055	ENSSLDG00000025066
Greater amberjack	MODERN SPECIES	47	trub2 (ENSSDUG00000016928)	ENSSDUG00000016963	srsf3a (ENSSDUG00000016982)	fkbp5 (ENSSDUG00000017003)	slc6a22.1 (ENSSDUG00000017029)	slc6a22.2 (ENSSDUG00000017092)	ENSSDUG00000017178	ENSSDUG00000019004	ENSSDUG00000019022	ENSSDUG00000019040	synprb (ENSSDUG00000019054)	ENSSDUG00000019087 ##17	PTPRG (ENSSDUG00000019155)	ENSSDUG00000019206	cfap20dc (ENSSDUG00000019218)	ENSSDUG00000019238 ##22	FAM107A (ENSSDUG00000019338)	CAMK1 (ENSSDUG00000019354)	pbrm1l (ENSSDUG00000019381)	stau1 (ENSSDUG00000019439)	ENSSDUG00000019462	ENSSDUG00000019489	KCNB1 (ENSSDUG00000019497)	ptgis (ENSSDUG00000019508)	SRGAP3 (ENSSDUG00000019582)	OXTR (ENSSDUG00000019650)	cav3 (ENSSDUG00000019657)	cav4a (ENSSDUG00000019674)	ENSSDUG00000019680	rrp9 (ENSSDUG00000019686)	grm2b (ENSSDUG00000019723)
Barramundi perch	MODERN SPECIES	346										ENSLCAG00010013145	ENSLCAG00010012667	synprb (ENSLCAG00010012532)	ENSLCAG00010010421 ##17	PTPRG (ENSLCAG00010009905)	cfap20dc (ENSLCAG00010009859)	ENSLCAG00010009848 ##22	FAM107A (ENSLCAG00010009844)	CAMK1 (ENSLCAG00010009838)	pbrm1l (ENSLCAG00010009764)	stau1 (ENSLCAG00010009716)	ENSLCAG00010009708	ENSLCAG00010009704	ENSLCAG00010009695	KCNB1 (ENSLCAG00010009693)	ptgis (ENSLCAG00010009685)	SRGAP3 (ENSLCAG00010009556)	OXTR (ENSLCAG00010009513)	cav3 (ENSLCAG00010009510)	cav4a (ENSLCAG00010009508)	ENSLCAG00010009507	rrp9 (ENSLCAG00010009501)
Ovalentaria	ANCESTRAL SPECIES	2	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d
Ovalentaria_B	ANCESTRAL SPECIES	5	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Pomacentridae	ANCESTRAL SPECIES	3	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Pomacentridae_A	ANCESTRAL SPECIES	2	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Amphiprion	ANCESTRAL SPECIES	49	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a
Orange clownfish	DUPLICATION
Orange clownfish	MODERN SPECIES	20	ENSAPEG00000013322	ENSAPEG00000013245	tgfa (ENSAPEG00000013206)	hdhd3 (ENSAPEG00000013199)	trub2 (ENSAPEG00000013177)	ENSAPEG00000013150	srsf3a (ENSAPEG00000013125)	fkbp5 (ENSAPEG00000013085)	slc6a22.1 (ENSAPEG00000013024)	slc6a22.2 (ENSAPEG00000012976)	opn1mw1 (ENSAPEG00000012915)	synprb (ENSAPEG00000012864)	ENSAPEG00000012798 ##17	PTPRG (ENSAPEG00000012727)	cfap20dc (ENSAPEG00000012655)	ENSAPEG00000012558 ##22	FAM107A (ENSAPEG00000012516)	CAMK1 (ENSAPEG00000012457)	pbrm1l (ENSAPEG00000012360)	stau1 (ENSAPEG00000012308)	ENSAPEG00000012264	ENSAPEG00000012240	KCNB1 (ENSAPEG00000012207)	ptgis (ENSAPEG00000012169)	SRGAP3 (ENSAPEG00000012088)	OXTR (ENSAPEG00000012071)	cav4a (ENSAPEG00000012054)	ENSAPEG00000012049	rrp9 (ENSAPEG00000011949)	grm2b (ENSAPEG00000011918)	TEX264 (ENSAPEG00000011913)
Orange clownfish	MODERN SPECIES	20	hdac11 (ENSAPEG00000015895)	IQSEC1 (ENSAPEG00000015756)	acad9 (ENSAPEG00000015647)	EFCC1 (ENSAPEG00000015632)	nuf2 (ENSAPEG00000015556)	snrpe (ENSAPEG00000015525)	ENSAPEG00000015506	wnt4 (ENSAPEG00000015471)	ENSAPEG00000015451	fbxo2 (ENSAPEG00000015443)	card19 (ENSAPEG00000015426)	ninj1 (ENSAPEG00000015402)	ENSAPEG00000015353	itih3b.2 (ENSAPEG00000015325)	ENSAPEG00000015303	ENSAPEG00000015198 ##22	CAMK1 (ENSAPEG00000015147)	ERC2 (ENSAPEG00000015094)	BSN (ENSAPEG00000015039)	bap1 (ENSAPEG00000015005)	ENSAPEG00000014967	cyb561d2 (ENSAPEG00000014958)	rassf1 (ENSAPEG00000014946)	tusc2b (ENSAPEG00000014927)	HYAL2 (ENSAPEG00000014914) ##9	abhd14a (ENSAPEG00000014892)	acy1 (ENSAPEG00000014804)	CACNA2D2 (ENSAPEG00000014687)	ENSAPEG00000014556	ENSAPEG00000014519	ENSAPEG00000014470
Clown anemonefish	MODERN SPECIES	1475	tgfa (ENSAOCG00000010826)	hdhd3 (ENSAOCG00000010837)	trub2 (ENSAOCG00000002330)	ENSAOCG00000000679	srsf3a (ENSAOCG00000002405)	fkbp5 (ENSAOCG00000000690)	slc6a22.1 (ENSAOCG00000010964)	slc6a22.2 (ENSAOCG00000000703)	ENSAOCG00000011229	ENSAOCG00000011243	ENSAOCG00000011271	synprb (ENSAOCG00000011312)	ENSAOCG00000011557 ##17	PTPRG (ENSAOCG00000011780)	ENSAOCG00000011812	ENSAOCG00000011870 ##22	FAM107A (ENSAOCG00000011928)	CAMK1 (ENSAOCG00000011985)	pbrm1l (ENSAOCG00000012154)	stau1 (ENSAOCG00000012224)	ENSAOCG00000012261	ENSAOCG00000012289	KCNB1 (ENSAOCG00000012301)	ptgis (ENSAOCG00000000759)	ENSAOCG00000012350	ENSAOCG00000012363	ABHD6 (ENSAOCG00000012378)	rpp14 (ENSAOCG00000002310)	HTD2 (ENSAOCG00000012414)	pxk (ENSAOCG00000002656)	pdhb (ENSAOCG00000012607)
Spiny chromis	MODERN SPECIES	59	tgfa (ENSAPOG00000018319)	hdhd3 (ENSAPOG00000018303)	trub2 (ENSAPOG00000018284)	trub2 (ENSAPOG00000018216)	ENSAPOG00000018190	srsf3a (ENSAPOG00000018179)	fkbp5 (ENSAPOG00000018147)	slc6a22.1 (ENSAPOG00000018136)	slc6a22.2 (ENSAPOG00000018086)	ENSAPOG00000018073	ENSAPOG00000018038	synprb (ENSAPOG00000018001)	ENSAPOG00000017984 ##17	PTPRG (ENSAPOG00000017779)	ENSAPOG00000017625	ENSAPOG00000017615 ##22	ENSAPOG00000017572	CAMK1 (ENSAPOG00000017490)	pbrm1l (ENSAPOG00000000473)	stau1 (ENSAPOG00000017260)	ENSAPOG00000017170	ENSAPOG00000017110	KCNB1 (ENSAPOG00000017097)	ptgis (ENSAPOG00000017080)	SRGAP3 (ENSAPOG00000016964)	OXTR (ENSAPOG00000016876)	cav4a (ENSAPOG00000016863)	rrp9 (ENSAPOG00000016832)	ENSAPOG00000016808	grm2b (ENSAPOG00000016803)	TEX264 (ENSAPOG00000016768)
Bicolor damselfish	MODERN SPECIES	246	tgfa (ENSSPAG00000017847)	hdhd3 (ENSSPAG00000017863)	trub2 (ENSSPAG00000017865)	ENSSPAG00000017880	srsf3a (ENSSPAG00000017902)	fkbp5 (ENSSPAG00000017911)	slc6a22.1 (ENSSPAG00000017938)	slc6a22.2 (ENSSPAG00000018011)	odad3 (ENSSPAG00000018598)	ENSSPAG00000018702	ENSSPAG00000018720	synprb (ENSSPAG00000018733)	ENSSPAG00000018760 ##17	PTPRG (ENSSPAG00000018833)	ENSSPAG00000018947	ENSSPAG00000018981 ##22	FAM107A (ENSSPAG00000019002)	CAMK1 (ENSSPAG00000019054)	pbrm1l (ENSSPAG00000019107)	stau1 (ENSSPAG00000019275)	ENSSPAG00000019296	ENSSPAG00000019324	KCNB1 (ENSSPAG00000019351)	ptgis (ENSSPAG00000019362)	SRGAP3 (ENSSPAG00000019377)	OXTR (ENSSPAG00000019480)	cav4a (ENSSPAG00000019508)	ENSSPAG00000019519	rrp9 (ENSSPAG00000019524)	grm2b (ENSSPAG00000019561)	TEX264 (ENSSPAG00000019573)
Cichlidae	ANCESTRAL SPECIES	1	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00940000165239.a	ENSGT00390000011082
Pseudocrenilabrinae	ANCESTRAL SPECIES	4	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00940000165239.a	ENSGT00390000011082
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	2	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00940000165239.a	ENSGT00390000011082
Lyretail cichlid	MODERN SPECIES	294	tgfa (ENSNBRG00000016157)	hdhd3 (ENSNBRG00000016279)	trub2 (ENSNBRG00000016294)	ENSNBRG00000016337	srsf3a (ENSNBRG00000016360)	fkbp5 (ENSNBRG00000016378)	slc6a22.1 (ENSNBRG00000016451)	slc6a22.2 (ENSNBRG00000016737)	ENSNBRG00000016795	ENSNBRG00000016841	ENSNBRG00000016907	synprb (ENSNBRG00000017171)	ENSNBRG00000017208 ##17	PTPRG (ENSNBRG00000017259)	ENSNBRG00000017330	ENSNBRG00000017372 ##22	FAM107A (ENSNBRG00000017436)	CAMK1 (ENSNBRG00000017444)	pbrm1l (ENSNBRG00000017496)	stau1 (ENSNBRG00000017596)	ENSNBRG00000017633	KCNB1 (ENSNBRG00000017665)	ptgis (ENSNBRG00000017712)	SRGAP3 (ENSNBRG00000017824)	OXTR (ENSNBRG00000017883)	cav4a (ENSNBRG00000017945)	ENSNBRG00000017957	rrp9 (ENSNBRG00000017987)	grm2b (ENSNBRG00000018053)	ENSNBRG00000018072	BRK1 (ENSNBRG00000018086)
Haplochromini	ANCESTRAL SPECIES	1	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00940000165239.a	ENSGT00390000011082
Burton s mouthbrooder	MODERN SPECIES	356	tgfa (ENSHBUG00000022338)	hdhd3 (ENSHBUG00000022347)	trub2 (ENSHBUG00000022384)	ENSHBUG00000022390	srsf3a (ENSHBUG00000022402)	fkbp5 (ENSHBUG00000022411)	slc6a22.1 (ENSHBUG00000022446)	slc6a22.2 (ENSHBUG00000022489)	ENSHBUG00000022547	ENSHBUG00000022586	ENSHBUG00000022646	synprb (ENSHBUG00000022658)	ENSHBUG00000022995 ##17	PTPRG (ENSHBUG00000023031)	cfap20dc (ENSHBUG00000023060)	ENSHBUG00000023220 ##22	FAM107A (ENSHBUG00000023239)	CAMK1 (ENSHBUG00000023294)	pbrm1l (ENSHBUG00000023605)	stau1 (ENSHBUG00000023668)	ENSHBUG00000023677	ENSHBUG00000023703	KCNB1 (ENSHBUG00000023718)	ptgis (ENSHBUG00000000721)	SRGAP3 (ENSHBUG00000023791)	OXTR (ENSHBUG00000001833)	cav4a (ENSHBUG00000001843)	ENSHBUG00000001850	rrp9 (ENSHBUG00000000019)	grm2b (ENSHBUG00000001898)	ENSHBUG00000001920
Haplochromini_A	ANCESTRAL SPECIES		ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00940000165239.a	ENSGT00390000011082
P. nyererei	MODERN SPECIES	307	tgfa (ENSPNYG00000013629)	hdhd3 (ENSPNYG00000013649)	trub2 (ENSPNYG00000013666)	ENSPNYG00000013698	srsf3a (ENSPNYG00000013747)	fkbp5 (ENSPNYG00000013801)	slc6a22.1 (ENSPNYG00000013819)	slc6a22.2 (ENSPNYG00000013897)	ENSPNYG00000013978	ENSPNYG00000013994	ENSPNYG00000014010	synprb (ENSPNYG00000014029)	ENSPNYG00000014061 ##17	PTPRG (ENSPNYG00000014118)	ENSPNYG00000014163	ENSPNYG00000014199 ##22	ENSPNYG00000014239	CAMK1 (ENSPNYG00000014260)	pbrm1l (ENSPNYG00000014336)	stau1 (ENSPNYG00000014436)	ENSPNYG00000014472	KCNB1 (ENSPNYG00000014507)	ptgis (ENSPNYG00000014521)	SRGAP3 (ENSPNYG00000014550)	OXTR (ENSPNYG00000014581)	cav4a (ENSPNYG00000014593)	ENSPNYG00000014602	rrp9 (ENSPNYG00000014637)	grm2b (ENSPNYG00000014736)	ENSPNYG00000014755	BRK1 (ENSPNYG00000014769)
Haplochromini_B	ANCESTRAL SPECIES		ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.cb	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.bb	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00940000165239.a	ENSGT00390000011082
Zebra mbuna	MODERN SPECIES	1108	hdhd3 (ENSMZEG00005016024)	trub2 (ENSMZEG00005016018)	ENSMZEG00005016014	srsf3a (ENSMZEG00005016010)	fkbp5 (ENSMZEG00005016000)	slc6a22.1 (ENSMZEG00005015991)	slc6a22.2 (ENSMZEG00005015949)	ENSMZEG00005015909	ENSMZEG00005015892	ENSMZEG00005015885	synprb (ENSMZEG00005015880)	ENSMZEG00005015862 ##17	PTPRG (ENSMZEG00005015811)	ENSMZEG00005015780	ENSMZEG00005015770	ENSMZEG00005015745 ##22	ENSMZEG00005015736	CAMK1 (ENSMZEG00005015730)	pbrm1l (ENSMZEG00005015649)	stau1 (ENSMZEG00005015605)	ENSMZEG00005015591	KCNB1 (ENSMZEG00005015573)	ptgis (ENSMZEG00005015522)	SRGAP3 (ENSMZEG00005015480)	OXTR (ENSMZEG00005015467)	cav4a (ENSMZEG00005015461)	ENSMZEG00005015456	rrp9 (ENSMZEG00005015435)	grm2b (ENSMZEG00005015414)	ENSMZEG00005015357	BRK1 (ENSMZEG00005015346)
Eastern happy	MODERN SPECIES	17	tgfa (ENSACLG00000010739)	hdhd3 (ENSACLG00000010788)	trub2 (ENSACLG00000010793)	ENSACLG00000010848	srsf3a (ENSACLG00000010873)	fkbp5 (ENSACLG00000010908)	slc6a22.1 (ENSACLG00000010928)	slc6a22.2 (ENSACLG00000010967)	ENSACLG00000011010	ENSACLG00000011041	ENSACLG00000011070	synprb (ENSACLG00000011098)	ENSACLG00000011254 ##17	PTPRG (ENSACLG00000011378)	cfap20dc (ENSACLG00000011721)	ENSACLG00000011755 ##22	FAM107A (ENSACLG00000011901)	CAMK1 (ENSACLG00000011925)	pbrm1l (ENSACLG00000012002)	stau1 (ENSACLG00000012270)	ENSACLG00000012361	KCNB1 (ENSACLG00000012373)	ptgis (ENSACLG00000012392)	SRGAP3 (ENSACLG00000012441)	cav4a (ENSACLG00000012508)	OXTR (ENSACLG00000012539)	ENSACLG00000012571	rrp9 (ENSACLG00000012583)	grm2b (ENSACLG00000012648)	ENSACLG00000012682	BRK1 (ENSACLG00000012738)
Nile tilapia	MODERN SPECIES	17	tgfa (ENSONIG00000035959)	hdhd3 (ENSONIG00000004233)	trub2 (ENSONIG00000004230)	ENSONIG00000039490	fkbp5 (ENSONIG00000004221)	srsf3a (ENSONIG00000004224)	slc6a22.1 (ENSONIG00000004216)	slc6a22.2 (ENSONIG00000004210)	ENSONIG00000004207	ENSONIG00000004206	ENSONIG00000004204	synprb (ENSONIG00000004202)	ENSONIG00000004194 ##17	PTPRG (ENSONIG00000004184)	cfap20dc (ENSONIG00000004176)	ENSONIG00000004174 ##22	FAM107A (ENSONIG00000004173)	CAMK1 (ENSONIG00000004166)	pbrm1l (ENSONIG00000004158)	stau1 (ENSONIG00000004152)	ENSONIG00000004150	KCNB1 (ENSONIG00000004149)	ptgis (ENSONIG00000004143)	SRGAP3 (ENSONIG00000004135)	ENSONIG00000035170	OXTR (ENSONIG00000037102)	cav4a (ENSONIG00000004130)	ENSONIG00000004129	rrp9 (ENSONIG00000004124)	grm2b (ENSONIG00000004117)	GPX1 (ENSONIG00000034924)
Midas cichlid	MODERN SPECIES	1343	hdhd3 (ENSACIG00000016541)	trub2 (ENSACIG00000016500)	ENSACIG00000016471	srsf3a (ENSACIG00000016419)	fkbp5 (ENSACIG00000016383)	slc6a22.1 (ENSACIG00000016350)	ENSACIG00000016335	slc6a22.2 (ENSACIG00000016308)	ENSACIG00000016288	ENSACIG00000016277	synprb (ENSACIG00000016263)	ENSACIG00000016210 ##17	PTPRG (ENSACIG00000016138)	ENSACIG00000016112	ENSACIG00000016098	ENSACIG00000016060 ##22	FAM107A (ENSACIG00000016041)	CAMK1 (ENSACIG00000016025)	pbrm1l (ENSACIG00000015948)	stau1 (ENSACIG00000015918)	ENSACIG00000015908	KCNB1 (ENSACIG00000015902)	ptgis (ENSACIG00000015884)	SRGAP3 (ENSACIG00000015847)	OXTR (ENSACIG00000015830)	cav4a (ENSACIG00000015811)	ENSACIG00000015804	rrp9 (ENSACIG00000015770)	grm2b (ENSACIG00000015756)
Atherinomorphae	ANCESTRAL SPECIES	2	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
Cyprinodontiformes	ANCESTRAL SPECIES	2	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
Aplocheiloidei	ANCESTRAL SPECIES	10	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082	ENSGT00940000156617.e.a
Turquoise killifish	MODERN SPECIES	1619	tgfa (ENSNFUG00015022056)	HDHD3 (ENSNFUG00015022062)	trub2 (ENSNFUG00015022069)	ENSNFUG00015022099	srsf3a (ENSNFUG00015022103)	fkbp5 (ENSNFUG00015022105)	SLC6A13 (ENSNFUG00015022130)	opn1mw1 (ENSNFUG00015022200)	SYNPR (ENSNFUG00015022226)	CADPSB (ENSNFUG00015022397) ##17	CA16B (ENSNFUG00015024541)	ENSNFUG00015024855	ENSNFUG00015024857	ENSNFUG00015024858	cfap20dc (ENSNFUG00015024860)	ENSNFUG00015024861 ##22	CAMK1 (ENSNFUG00015024900)	pbrm1l (ENSNFUG00015025092)	STAU1 (ENSNFUG00015004728)	KCNB1 (ENSNFUG00015004774)	PTGIS (ENSNFUG00015004815)	SRGAP3 (ENSNFUG00015005261)	ENSNFUG00015006951	OXTR (ENSNFUG00015006954)	ENSNFUG00015006959	cav4a (ENSNFUG00015006961)	ENSNFUG00015006964	RRP9 (ENSNFUG00015006975)	grm2b (ENSNFUG00015007043)	GPX1A (ENSNFUG00015007049)	BRK1 (ENSNFUG00015007053)
Mangrove rivulus	MODERN SPECIES	10	ENSKMAG00000007971	hdhd3 (ENSKMAG00000007904)	tgfa (ENSKMAG00000007895)	trub2 (ENSKMAG00000007861)	ENSKMAG00000007843	srsf3a (ENSKMAG00000007829)	fkbp5 (ENSKMAG00000007812)	slc6a22.1 (ENSKMAG00000007782)	slc6a22.2 (ENSKMAG00000007753)	ENSKMAG00000007725	ENSKMAG00000007693	synprb (ENSKMAG00000007673)	ENSKMAG00000007463 ##17	PTPRG (ENSKMAG00000007347)	ENSKMAG00000007328	ENSKMAG00000007313 ##22	CAMK1 (ENSKMAG00000007272)	pbrm1l (ENSKMAG00000007201)	stau1 (ENSKMAG00000007135)	KCNB1 (ENSKMAG00000007106)	ptgis (ENSKMAG00000006899)	SRGAP3 (ENSKMAG00000006834)	OXTR (ENSKMAG00000006821)	cav4a (ENSKMAG00000006815)	ENSKMAG00000006803	rrp9 (ENSKMAG00000006788)	grm2b (ENSKMAG00000006751)	TEX264 (ENSKMAG00000006733)	ENSKMAG00000006717	BRK1 (ENSKMAG00000006704)	rbm5 (ENSKMAG00000006663)
Cyprinodontoidei	ANCESTRAL SPECIES	4	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
NAME_4	ANCESTRAL SPECIES	14	ENSGT00940000161061.b.w.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082	ENSGT00940000156617.e.a
Sheepshead minnow	MODERN SPECIES	709																ENSCVAG00000006045 ##22	CAMK1 (ENSCVAG00000006001)	pbrm1l (ENSCVAG00000005966)	stau1 (ENSCVAG00000005906)	KCNB1 (ENSCVAG00000005877)	ptgis (ENSCVAG00000005869)	SRGAP3 (ENSCVAG00000005843)	OXTR (ENSCVAG00000005803)	cav4a (ENSCVAG00000005798)	ENSCVAG00000005782	rrp9 (ENSCVAG00000005772)	grm2b (ENSCVAG00000005733)	TEX264 (ENSCVAG00000005686)	ENSCVAG00000005679	BRK1 (ENSCVAG00000005670)	rbm5 (ENSCVAG00000005655)
Mummichog	MODERN SPECIES	2305	ENSFHEG00000014726	ENSFHEG00000014705	tgfa (ENSFHEG00000014669)	hdhd3 (ENSFHEG00000014663)	trub2 (ENSFHEG00000014655)	ENSFHEG00000014620	srsf3a (ENSFHEG00000014610)	fkbp5 (ENSFHEG00000014553)	slc6a22.1 (ENSFHEG00000014526)	slc6a22.2 (ENSFHEG00000014474)	ENSFHEG00000014365	synprb (ENSFHEG00000014323)	ENSFHEG00000013898 ##17	PTPRG (ENSFHEG00000013802)	cfap20dc (ENSFHEG00000013787)	ENSFHEG00000013771 ##22	CAMK1 (ENSFHEG00000013750)	pbrm1l (ENSFHEG00000013719)	stau1 (ENSFHEG00000013517)	KCNB1 (ENSFHEG00000013464)	ptgis (ENSFHEG00000013447)	SRGAP3 (ENSFHEG00000013436)	OXTR (ENSFHEG00000013425)	cav4a (ENSFHEG00000013419)	ENSFHEG00000013403	rrp9 (ENSFHEG00000013392)	grm2b (ENSFHEG00000013306)
Poeciliinae	ANCESTRAL SPECIES	4	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
Poecilia	ANCESTRAL SPECIES	23	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
Guppy	MODERN SPECIES	457	SLC2A11 (ENSPREG00000002470)	tgfa (ENSPREG00000002503)	hdhd3 (ENSPREG00000002532)	trub2 (ENSPREG00000002549)	ENSPREG00000002590	srsf3a (ENSPREG00000002610)	fkbp5 (ENSPREG00000002675)	slc6a22.1 (ENSPREG00000002693)	slc6a22.2 (ENSPREG00000002732)	ENSPREG00000002751	ENSPREG00000002827	synprb (ENSPREG00000002900)	ENSPREG00000002986 ##17	PTPRG (ENSPREG00000003236)	cfap20dc (ENSPREG00000003271)	ENSPREG00000003296 ##22	CAMK1 (ENSPREG00000003322)	pbrm1l (ENSPREG00000003383)	stau1 (ENSPREG00000003477)	KCNB1 (ENSPREG00000003499)	ptgis (ENSPREG00000003505)	SRGAP3 (ENSPREG00000003536)	OXTR (ENSPREG00000003635)	ENSPREG00000003638	cav4a (ENSPREG00000003651)	ENSPREG00000003676	rrp9 (ENSPREG00000003687)	grm2b (ENSPREG00000003710)	ENSPREG00000003754	ENSPREG00000003769	BRK1 (ENSPREG00000003777)
NAME_6	ANCESTRAL SPECIES	7	ENSGT00940000161061.b	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00530000069347	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
Sailfin molly	MODERN SPECIES	1614															ENSPLAG00000015228	ENSPLAG00000015257 ##22	CAMK1 (ENSPLAG00000015276)
Platyfish	MODERN SPECIES	12	tgfa (ENSXMAG00000015497)	hdhd3 (ENSXMAG00000015492)	trub2 (ENSXMAG00000015478)	ENSXMAG00000029063	srsf3a (ENSXMAG00000015454)	fkbp5 (ENSXMAG00000015416)	slc6a22.1 (ENSXMAG00000015360)	slc6a22.2 (ENSXMAG00000015285)	ENSXMAG00000015275	ENSXMAG00000015253	synprb (ENSXMAG00000015238)	ENSXMAG00000022668	ENSXMAG00000015230 ##17	PTPRG (ENSXMAG00000023102)	cfap20dc (ENSXMAG00000014709)	ENSXMAG00000027028 ##22	CAMK1 (ENSXMAG00000016140)	pbrm1l (ENSXMAG00000016160)	stau1 (ENSXMAG00000016175)	KCNB1 (ENSXMAG00000016193)	ptgis (ENSXMAG00000016194)	SRGAP3 (ENSXMAG00000016217)	OXTR (ENSXMAG00000016299)	cav4a (ENSXMAG00000016303)	ENSXMAG00000019600	rrp9 (ENSXMAG00000016308)	grm2b (ENSXMAG00000016335)	TEX264 (ENSXMAG00000029495)	ENSXMAG00000023148	ENSXMAG00000024986	rbm5 (ENSXMAG00000016369)
Oryzias	ANCESTRAL SPECIES	1	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.w	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.x	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082	ENSGT00940000156617.e.a
Oryzias_b	ANCESTRAL SPECIES	3	ENSGT00940000160058	ENSGT00390000015582	ENSGT00940000156773	ENSGT00940000160379	ENSGT00910000144115.a.hc.a	ENSGT00940000158726	ENSGT00940000163827.a.b	ENSGT00940000166826	ENSGT01030000234549.a.a.a.a.a.b.a.c.a	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.w	ENSGT01030000234549.a.a.a.a.a.b.a.c.b.x	ENSGT01030000234637.b.d.a.b	ENSGT00590000083094.a.a.c.b ##17	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b.b	ENSGT00940000157304	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT00950000182824.a.b.a.j.b	ENSGT01050000244882.a.a.b.a.a	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082	ENSGT00940000156617.e.a
Indian medaka	MODERN SPECIES	8	LIMCH1 (ENSOMEG00000003079)	phox2bb (ENSOMEG00000003025)	tmem33 (ENSOMEG00000003014)	bbs7 (ENSOMEG00000002989)	ccna2 (ENSOMEG00000002951)	ENSOMEG00000002942	anxa5a (ENSOMEG00000002931)	fgfbp2a (ENSOMEG00000002916)	prom1a (ENSOMEG00000002864)	ldb2a (ENSOMEG00000002731)	ENSOMEG00000002719	qdpra (ENSOMEG00000002713)	fstl5 (ENSOMEG00000002696)	olfch1 (ENSOMEG00000002634)	cfap20dc (ENSOMEG00000002553)	ENSOMEG00000002521 ##22	CAMK1 (ENSOMEG00000002510)	pbrm1l (ENSOMEG00000002483)	stau1 (ENSOMEG00000002388)	ENSOMEG00000002378	KCNB1 (ENSOMEG00000002372)	ptgis (ENSOMEG00000002353)	SRGAP3 (ENSOMEG00000002321)	OXTR (ENSOMEG00000002296)	cav4a (ENSOMEG00000002292)	ENSOMEG00000002289	rrp9 (ENSOMEG00000002267)	grm2b (ENSOMEG00000002258)	TEX264 (ENSOMEG00000002251)	ENSOMEG00000002243	brk1 (ENSOMEG00000002231)
Javanese ricefish	MODERN SPECIES	19	SLC2A11 (ENSOJAG00000014798)	tgfa (ENSOJAG00000014767)	hdhd3 (ENSOJAG00000014754)	trub2 (ENSOJAG00000014724)	ENSOJAG00000014707	srsf3a (ENSOJAG00000014634)	fkbp5 (ENSOJAG00000014430)	slc6a22.1 (ENSOJAG00000013860)	slc6a22.2 (ENSOJAG00000013176)	ENSOJAG00000012957	ENSOJAG00000012883	synprb (ENSOJAG00000012866)	ENSOJAG00000012081 ##17	PTPRG (ENSOJAG00000010037)	cfap20dc (ENSOJAG00000009907)	ENSOJAG00000009882 ##22	CAMK1 (ENSOJAG00000009200)	pbrm1l (ENSOJAG00000003954)	stau1 (ENSOJAG00000003262)	KCNB1 (ENSOJAG00000003247)	ptgis (ENSOJAG00000003197)	SRGAP3 (ENSOJAG00000001990)	OXTR (ENSOJAG00000001760)	cav4a (ENSOJAG00000001753)	ENSOJAG00000001743	grm2b (ENSOJAG00000001598)	ENSOJAG00000001575	ENSOJAG00000001568	BRK1 (ENSOJAG00000001560)	rbm5 (ENSOJAG00000001542)	SLC38A3 (ENSOJAG00000001344)
Oryzias_a	ANCESTRAL SPECIES	192																ENSGT00950000183004.a.a.b ##22	ENSGT00940000156378.a.b
Chinese medaka	MODERN SPECIES	1215																ENSOSIG00000016171 ##22	CAMK1 (ENSOSIG00000016169)
Pinecone sodierfish	MODERN SPECIES	19	srsf3a (ENSMMDG00005005266)	fkbp5 (ENSMMDG00005005247)	slc6a22.1 (ENSMMDG00005004379)	slc6a22.2 (ENSMMDG00005004005)	opn1mw1 (ENSMMDG00005003988)	ENSMMDG00005014366	ENSMMDG00005014231	ENSMMDG00005014196	ENSMMDG00005014190	ENSMMDG00005014055	synprb (ENSMMDG00005013988)	ENSMMDG00005013780 ##17	PTPRG (ENSMMDG00005013274)	ENSMMDG00005013249	ENSMMDG00005013244	ENSMMDG00005013232 ##22	ENSMMDG00005013228	CAMK1 (ENSMMDG00005013217)	pbrm1l (ENSMMDG00005012721)	stau1 (ENSMMDG00005012622)	ENSMMDG00005012611	ENSMMDG00005012607	KCNB1 (ENSMMDG00005012602)	ptgis (ENSMMDG00005012309)	SRGAP3 (ENSMMDG00005004952)	OXTR (ENSMMDG00005004715)	cav3 (ENSMMDG00005004692)	cav4a (ENSMMDG00005004685)	ENSMMDG00005004682	rrp9 (ENSMMDG00005004663)	grm2b (ENSMMDG00005004629)
Cod	MODERN SPECIES	4	ENSGMOG00000017604	parapinopsinb (ENSGMOG00000017584)	cacna1da (ENSGMOG00000017493)	ENSGMOG00000023920	ENSGMOG00000028357	card19 (ENSGMOG00000017439)	ninj1 (ENSGMOG00000017428)	ENSGMOG00000027015	ENSGMOG00000031019	ENSGMOG00000017321	ENSGMOG00000017343	ENSGMOG00000017300	ENSGMOG00000017240 ##17	PTPRG (ENSGMOG00000017157)	ENSGMOG00000017097	ENSGMOG00000016897 ##22	ENSGMOG00000016883	pbrm1l (ENSGMOG00000016872)	stau1 (ENSGMOG00000016850)	ENSGMOG00000016833	ENSGMOG00000028035	ptgis (ENSGMOG00000016802)	ENSGMOG00000016745	ENSGMOG00000031309	cav4a (ENSGMOG00000030221)	ENSGMOG00000025182	rrp9 (ENSGMOG00000016148)	grm2b (ENSGMOG00000016184)	TEX264 (ENSGMOG00000016196)	ENSGMOG00000016217	rbm5 (ENSGMOG00000016224)
Protacanthopterygii	ANCESTRAL SPECIES	267															ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.c.a
Northern pike	MODERN SPECIES	16	PRELP (ENSELUG00000002992)	zgc:113307 (ENSELUG00000002973)	fmoda (ENSELUG00000002963)	slc6a14 (ENSELUG00000002949)	slc6a14 (ENSELUG00000002932)	ENSELUG00000002922	ENSELUG00000002849	ENSELUG00000031903	TEX264 (ENSELUG00000002762)	grm2b (ENSELUG00000002750)	rrp9 (ENSELUG00000002740)	ENSELUG00000028111	ENSELUG00000002696 ##17	PTPRG (ENSELUG00000002597)	cfap20dc (ENSELUG00000002576)	ENSELUG00000000064 ##22	ENSELUG00000002556	CAMK1 (ENSELUG00000002551)	pbrm1l (ENSELUG00000002542)	stau1 (ENSELUG00000002529)	KCNB1 (ENSELUG00000002510)	ptgis (ENSELUG00000002501)	SRGAP3 (ENSELUG00000002479)	OXTR (ENSELUG00000002439)	cav3 (ENSELUG00000002434)	cav4a (ENSELUG00000002429)	synprb (ENSELUG00000002418)	slc6a22.2 (ENSELUG00000002414)	slc6a22.1 (ENSELUG00000002406)	fkbp5 (ENSELUG00000002397)	srsf3a (ENSELUG00000002390)
Salmoninae	ANCESTRAL SPECIES	150					ENSGT00940000154557	ENSGT00940000159688.h	ENSGT00940000157007.i.b.f	ENSGT00940000158177.a	ENSGT00940000160163.g	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000158328.h	ENSGT00950000182998.C.b.b.d	ENSGT00590000083094.a.a.c.b.c.a ##17	ENSGT00940000155048.d.b.f	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.c.a	ENSGT00390000003017.c.b.b.f	ENSGT00940000157304.n	ENSGT00940000165342.a	ENSGT00390000008325.b.a.d	ENSGT00940000154899.fb.b.d	ENSGT00940000153709.A.f.f	ENSGT00950000182824.a.b.a.j.b.a	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT00950000183006.A.a.a.b.e	ENSGT01030000234637.b.d.a.b.a	ENSGT00940000163827.a.b.i.a.a.a.a	ENSGT00940000163827.a.b.i.a.b
Salmoninae_a	ANCESTRAL SPECIES	21	ENSGT00920000149095.f	ENSGT00940000164807.F.d	ENSGT00940000154557.u.a	ENSGT00940000154557.u.b	ENSGT00940000159688.h	ENSGT00940000157007.i.b.f	ENSGT00940000158177.a	ENSGT00940000160163.g	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000158328.h	ENSGT00950000182998.C.b.b.d	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00590000083094.a.a.c.b.c.a ##17	ENSGT00940000155048.d.b.f	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.c.a	ENSGT00390000003017.c.b.b.f	ENSGT00940000157304.n	ENSGT00940000165342.a	ENSGT00390000008325.b.a.d	ENSGT00940000154899.fb.b.d	ENSGT00940000153709.A.f.f	ENSGT00950000182824.a.b.a.j.b.a	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT00950000183006.A.a.a.b.e	ENSGT01030000234637.b.d.a.b.a	ENSGT00940000163827.a.b.i.a.a.b	ENSGT00940000158726.p
Salmo	ANCESTRAL SPECIES	6	ENSGT00940000164807.F.d	ENSGT00940000157046.D.d.e.a	ENSGT00940000154557.u.a	ENSGT00940000154557.u.b	ENSGT00940000159688.h	ENSGT00940000157007.i.b.f	ENSGT00940000158177.a	ENSGT00940000160163.g	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000158328.h	ENSGT00950000182998.C.b.b.d	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00590000083094.a.a.c.b.c.a ##17	ENSGT00940000155048.d.b.f	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.c.a	ENSGT00390000003017.c.b.b.f	ENSGT00940000157304.n	ENSGT00940000165342.a	ENSGT00390000008325.b.a.d	ENSGT00940000154899.fb.b.d	ENSGT00940000153709.A.f.f	ENSGT00950000182824.a.b.a.j.b.a	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT00950000183006.A.a.a.b.e	ENSGT01030000234637.b.d.a.b.a	ENSGT00940000163827.a.b.i.a.a.b	ENSGT00940000158726.p
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000056283	ENSSSAG00000104270	ENSSSAG00000101314	ENSSSAG00000056368	slc6a14 (ENSSSAG00000060126)	fmoda (ENSSSAG00000116691)	zgc:113307 (ENSSSAG00000101752)	ENSSSAG00000079856	grm2b (ENSSSAG00000062842)	ENSSSAG00000062968	ENSSSAG00000092808	ENSSSAG00000063275 ##17	PTPRG (ENSSSAG00000072096)	ENSSSAG00000109258	cssa12h3orf67 (ENSSSAG00000074283)	ENSSSAG00000074292 ##22	FAM107A (ENSSSAG00000085133)	ENSSSAG00000074323	ENSSSAG00000085678	pbrm1l (ENSSSAG00000074858)	stau1 (ENSSSAG00000078617)	ENSSSAG00000078636	ENSSSAG00000111593	ENSSSAG00000078660	ptgis (ENSSSAG00000078664)	SRGAP3 (ENSSSAG00000078803)	ENSSSAG00000079716	CAV3 (ENSSSAG00000079720)	CAV2 (ENSSSAG00000079726)	ENSSSAG00000079729	slc6a22.1 (ENSSSAG00000054177)
River trout	MODERN SPECIES	5	ENSSTUG00000030633	ENSSTUG00000030572	ENSSTUG00000030504	slc6a14 (ENSSTUG00000029602)	fmoda (ENSSTUG00000029577)	zgc:113307 (ENSSTUG00000029568)	PRELP (ENSSTUG00000029554)	ENSSTUG00000029549	grm2b (ENSSTUG00000028947)	rrp9 (ENSSTUG00000026909)	ENSSTUG00000026906	ENSSTUG00000026902	ENSSTUG00000018511 ##17	PTPRG (ENSSTUG00000017417)	cfap20dc (ENSSTUG00000017322)	ENSSTUG00000017298 ##22	FAM107A (ENSSTUG00000017282)	CAMK1 (ENSSTUG00000014901)	pbrm1l (ENSSTUG00000013610)	stau1 (ENSSTUG00000013380)	ENSSTUG00000013294	ENSSTUG00000013285	KCNB1 (ENSSTUG00000013280)	ptgis (ENSSTUG00000013216)	SRGAP3 (ENSSTUG00000010018)	OXTR (ENSSTUG00000009937)	cav3 (ENSSTUG00000009927)	cav4a (ENSSTUG00000009920)	synprb (ENSSTUG00000009910)	synprb (ENSSTUG00000009877)	slc6a22.1 (ENSSTUG00000009688)
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000164807.F.d	ENSGT00940000161979.A.a.a.a.a	ENSGT00940000154557.u.a	ENSGT00940000154557.u.b	ENSGT00940000159688.h	ENSGT00940000157007.i.b.f	ENSGT00940000158177.a	ENSGT00940000160163.g	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000158328.h	ENSGT00950000182998.C.b.b.d	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00590000083094.a.a.c.b.c.a ##17	ENSGT00940000155048.d.b.f	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.c.a	ENSGT00390000003017.c.b.b.f	ENSGT00940000157304.n	ENSGT00940000165342.a	ENSGT00390000008325.b.a.d	ENSGT00940000154899.fb.b.d	ENSGT00940000153709.A.f.f	ENSGT00950000182824.a.b.a.j.b.a	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT00950000183006.A.a.a.b.e	ENSGT01030000234637.b.d.a.b.a	ENSGT00940000163827.a.b.i.a.a.b	ENSGT00940000158726.p
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000039975	ENSOMYG00000077458	ENSOMYG00000040052	fmoda (ENSOMYG00000040136)	ENSOMYG00000040150	ENSOMYG00000067022	ENSOMYG00000040164	grm2b (ENSOMYG00000040212)	ENSOMYG00000040259	ENSOMYG00000060719	ENSOMYG00000040871 ##17	PTPRG (ENSOMYG00000044803)	ENSOMYG00000068265	ENSOMYG00000054794	cfap20dc (ENSOMYG00000045582)	ENSOMYG00000045608 ##22	FAM107A (ENSOMYG00000064739)	ENSOMYG00000045614	pbrm1l (ENSOMYG00000045685)	ENSOMYG00000074200	stau1 (ENSOMYG00000065880)	ENSOMYG00000045888	ENSOMYG00000045894	ENSOMYG00000045896	ptgis (ENSOMYG00000045898)	SRGAP3 (ENSOMYG00000045918)	ENSOMYG00000045971	CAV3 (ENSOMYG00000050880)	ENSOMYG00000045976	ENSOMYG00000045983	slc6a22.1 (ENSOMYG00000046029)
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00940000164807.F.d	ENSGT00940000161979.A.a.a.a.a	ENSGT00940000154557.u.b	ENSGT00940000159688.h	ENSGT00940000157007.i.b.f	ENSGT00940000158177.a	ENSGT00940000160163.g	ENSGT01030000234595.B.c.a.d.b	ENSGT00940000158328.h	ENSGT00950000182998.C.b.b.d	ENSGT00940000154348.c.b.b.b.ab.c.a	ENSGT00590000083094.a.a.c.b.c.a ##17	ENSGT00940000155048.d.b.f.a	ENSGT00940000155048.d.b.f.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.c.a	ENSGT00940000156378.a.b.c.b	ENSGT00390000003017.c.b.b.f	ENSGT00940000157304.n	ENSGT00940000165342.a	ENSGT00390000008325.b.a.d	ENSGT00940000154899.fb.b.d	ENSGT00940000153709.A.f.f	ENSGT00950000182824.a.b.a.j.b.a	ENSGT01050000244882.a.a.b.a.a.a	ENSGT00950000183006.B.f.b.b.cb.b	ENSGT00950000183006.A.a.a.b.e	ENSGT01030000234637.b.d.a.b.a	ENSGT00940000163827.a.b.i.a.a.b
Chinook salmon	MODERN SPECIES	11	CACNA2D2 (ENSOTSG00005013534)	ACY1 (ENSOTSG00005013881)	ENSOTSG00005013981	HYAL2 (ENSOTSG00005013982) ##9	tusc2b (ENSOTSG00005013983)	rassf1 (ENSOTSG00005013984)	cyb561d2 (ENSOTSG00005013985)	RAD54L2 (ENSOTSG00005013990)	bap1 (ENSOTSG00005015287)	BSN (ENSOTSG00005016011)	DPY19L3 (ENSOTSG00005016014)	ZNF507 (ENSOTSG00005016026)	tshz3b (ENSOTSG00005016027)	ENSOTSG00005016030	cfap20dc (ENSOTSG00005016033)	ENSOTSG00005016035 ##22	FAM107A (ENSOTSG00005016038)	CAMK1 (ENSOTSG00005016039)	ENSOTSG00005016040	pbrm1l (ENSOTSG00005016071)	stau1 (ENSOTSG00005018838)	ENSOTSG00005018899	KCNB1 (ENSOTSG00005018902)	ptgis (ENSOTSG00005018912)	SRGAP3 (ENSOTSG00005000111)	OXTR (ENSOTSG00005000151)	cav3 (ENSOTSG00005000154)	cav4a (ENSOTSG00005000157)	synprb (ENSOTSG00005000160)	slc6a22.1 (ENSOTSG00005000201)	slc6a22.1 (ENSOTSG00005000172)
Coho salmon	MODERN SPECIES		ENSOKIG00005037881	ENSOKIG00005037867	ENSOKIG00005037084	ENSOKIG00005036819	slc6a14 (ENSOKIG00005036666)	fmoda (ENSOKIG00005036646)	zgc:113307 (ENSOKIG00005036628)	PRELP (ENSOKIG00005036606)	grm2b (ENSOKIG00005036240)	rrp9 (ENSOKIG00005036200)	ENSOKIG00005036195	ENSOKIG00005032535 ##17	PTPRG (ENSOKIG00005031759)	ENSOKIG00005031678	cfap20dc (ENSOKIG00005031648)	ENSOKIG00005031631 ##22	FAM107A (ENSOKIG00005031599)	CAMK1 (ENSOKIG00005031322)	pbrm1l (ENSOKIG00005029406)	stau1 (ENSOKIG00005029219)	ENSOKIG00005029163	ENSOKIG00005029156	KCNB1 (ENSOKIG00005029149)	ptgis (ENSOKIG00005029090)	SRGAP3 (ENSOKIG00005027313)	OXTR (ENSOKIG00005027133)	CAV3 (ENSOKIG00005027114)	ENSOKIG00005027099	SYNPR (ENSOKIG00005027089)	slc6a22.1 (ENSOKIG00005026621)	fkbp5 (ENSOKIG00005026505)
Huchen	DUPLICATION
Huchen	MODERN SPECIES	49							ENSHHUG00000020783	ENSHHUG00000020788	SYNPR (ENSHHUG00000020791)	nampt2 (ENSHHUG00000020796)	ENSHHUG00000020830 ##17	fezf2 (ENSHHUG00000022725)	C3orf14 (ENSHHUG00000022733)	ptprga (ENSHHUG00000022739)	fhit (ENSHHUG00000022866)	ENSHHUG00000022871 ##22	FAM107A (ENSHHUG00000022875)	ccdc3b (ENSHHUG00000022887)	CAMK1 (ENSHHUG00000022897)	nek4 (ENSHHUG00000022966)	spcs1 (ENSHHUG00000023038)	glt8d1 (ENSHHUG00000023058)	gnl3 (ENSHHUG00000023072)	ANKS1A (ENSHHUG00000023095)	ENSHHUG00000023118	ENSHHUG00000023126	ENSHHUG00000023140	ENSHHUG00000023145
Huchen	MODERN SPECIES	173						ENSHHUG00000032588	slc6a14 (ENSHHUG00000032570)	fmoda (ENSHHUG00000032562)	zgc:113307 (ENSHHUG00000032556)	PRELP (ENSHHUG00000032550)	grm2b (ENSHHUG00000032515)	rrp9 (ENSHHUG00000032495)	ENSHHUG00000031301 ##17	PTPRG (ENSHHUG00000030973)	cfap20dc (ENSHHUG00000030934)	ENSHHUG00000030921 ##22
Otomorpha	ANCESTRAL SPECIES	112	ENSGT00950000183062.a.a.a	ENSGT00940000155198.A	ENSGT00940000165371.a	ENSGT00940000155198.B	ENSGT00940000167414	ENSGT00940000164786.a	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00510000048007	ENSGT00940000154343.fb	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00940000178103	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00950000183006.A.a.a.b	ENSGT00950000182998.C.b.b	ENSGT00940000158328	ENSGT01030000234595.B.c.a.d	ENSGT00390000016901.a	ENSGT00940000165239.a	ENSGT00390000011082
Otophysi	ANCESTRAL SPECIES	68	ENSGT00940000162859.o	ENSGT00950000183062.a.a.a	ENSGT00940000155198.A	ENSGT00940000165371.a	ENSGT00940000155198.B	ENSGT00940000167414	ENSGT00940000164786.a	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00510000048007	ENSGT00940000154343.fb	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT01050000244882.a.a.b.b	ENSGT00940000160763	ENSGT00940000157748	ENSGT00390000013981	ENSGT00940000160123.e.b.a.a.a	ENSGT00940000160123.e.b.a.a.b.d	ENSGT00940000160123.e.b.a.a.b.c
Characiphysae	ANCESTRAL SPECIES	2	ENSGT00940000160235	ENSGT00940000160065	ENSGT00940000155609.k	ENSGT00950000183092.a.c	ENSGT00950000182883.b.a.b.a	ENSGT00390000002762.a.a.b.a	ENSGT00940000161040.a	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00510000048007	ENSGT00940000154343.fb	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT01050000244882.a.a.b.b	ENSGT00940000160763	ENSGT00940000157748	ENSGT00390000013981	ENSGT00940000160123.e.b.a.a.a	ENSGT00940000160123.e.b.a.a.b.d	ENSGT00940000160123.e.b.a.a.b.c	ENSGT00940000160123.e.b.a.b
Channel catfish	MODERN SPECIES	2	arhgap9 (ENSIPUG00000024409)	ENSIPUG00000024408	gli1 (ENSIPUG00000023898)	INHBC (ENSIPUG00000023895)	r3hdm2 (ENSIPUG00000023873)	STAC3 (ENSIPUG00000023860)	nxph4 (ENSIPUG00000023858)	SHMT2 (ENSIPUG00000023855)	rbm19 (ENSIPUG00000023849)	EPHA2 (ENSIPUG00000023840)	h6pd (ENSIPUG00000023834)	cenps (ENSIPUG00000023822)	TARDBP (ENSIPUG00000023818)	PTPRG (ENSIPUG00000023782)	c11h3orf67 (ENSIPUG00000023770)	fam3d (ENSIPUG00000023765) ##22	CAMK1 (ENSIPUG00000023756)	PBRM1 (ENSIPUG00000023736)	stau1 (ENSIPUG00000023725)	KCNB1 (ENSIPUG00000023722)	ptgis (ENSIPUG00000023715)	OXTR (ENSIPUG00000023713)	tespa1 (ENSIPUG00000023710)	tarbp2 (ENSIPUG00000023701)	zgc:66479 (ENSIPUG00000023699)	ENSIPUG00000023684	ENSIPUG00000023675	ENSIPUG00000023673	ENSIPUG00000023670	ENSIPUG00000023658	GRM4 (ENSIPUG00000023655)
Characiphysae_b	ANCESTRAL SPECIES		ENSGT00940000160235	ENSGT00940000160065	ENSGT00940000155609.k	ENSGT00950000183092.a.c	ENSGT00950000182883.b.a.b.a	ENSGT00390000002762.a.a.b.a	ENSGT00940000161040.a	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00510000048007	ENSGT00940000154343.fb	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT01050000244882.a.a.b.b	ENSGT00940000160763	ENSGT00940000157748	ENSGT00390000013981	ENSGT00940000160123.e.b.a.a.a	ENSGT00940000160123.e.b.a.a.b.d	ENSGT00940000160123.e.b.a.a.b.c	ENSGT00940000160123.e.b.a.b
Electric eel	MODERN SPECIES	161	gli1 (ENSEEEG00000021580)	INHBC (ENSEEEG00000021577)	R3HDM2 (ENSEEEG00000021560)	NXPH4 (ENSEEEG00000021554)	shmt2 (ENSEEEG00000021230)	ENSEEEG00000021201	rbm19 (ENSEEEG00000021194)	epha2a (ENSEEEG00000021190)	H6PD (ENSEEEG00000021187)	rbp7b (ENSEEEG00000021185)	ENSEEEG00000021184	cenps (ENSEEEG00000021182)	tardbpb (ENSEEEG00000021159)	PTPRG (ENSEEEG00000021158)	ENSEEEG00000021157	ENSEEEG00000021124 ##22	ENSEEEG00000021123	CAMK1 (ENSEEEG00000021119)	pbrm1l (ENSEEEG00000021110)	stau1 (ENSEEEG00000021091)	ENSEEEG00000021073	ptgis (ENSEEEG00000021068)	oxtrb (ENSEEEG00000021067)	ENSEEEG00000021066	tarbp2 (ENSEEEG00000021065)	zgc:66479 (ENSEEEG00000021063)
Characoidei	ANCESTRAL SPECIES		ENSGT00940000160235	ENSGT00940000160065	ENSGT00940000155609.k	ENSGT00950000183092.a.c	ENSGT00950000182883.b.a.b.a	ENSGT00390000002762.a.a.b.a	ENSGT00940000161040.a	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00510000048007	ENSGT00940000154343.fb	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT01050000244882.a.a.b.a.a	ENSGT00940000160763	ENSGT00940000157748	ENSGT00390000013981	ENSGT00940000160123.e.b.a.a.a	ENSGT00940000160123.e.b.a.a.b.d	ENSGT00940000160123.e.b.a.a.b.c	ENSGT00940000160123.e.b.a.b
Red-bellied piranha	MODERN SPECIES	53								rbm19 (ENSPNAG00000012069)	epha2a (ENSPNAG00000002078)	H6PD (ENSPNAG00000006295)	rbp7b (ENSPNAG00000012031)	cenps (ENSPNAG00000002065)	tardbpb (ENSPNAG00000002028)	PTPRG (ENSPNAG00000002014)	cfap20dc (ENSPNAG00000011806)	ENSPNAG00000011791 ##22	FAM107A (ENSPNAG00000011740)	CAMK1 (ENSPNAG00000001882)	pbrm1l (ENSPNAG00000011378)	stau1 (ENSPNAG00000011323)	ENSPNAG00000001591	KCNB1 (ENSPNAG00000011167)	ptgis (ENSPNAG00000011160)	OXTR (ENSPNAG00000007175)	ENSPNAG00000011137	tarbp2 (ENSPNAG00000011128)	zgc:66479 (ENSPNAG00000001543)	ENSPNAG00000011086	ENSPNAG00000010766	ENSPNAG00000010639	igfn1.1 (ENSPNAG00000010528)
Mexicana tetra	MODERN SPECIES	4	ENSAMXG00000038043	gli1 (ENSAMXG00000041979)	INHBC (ENSAMXG00000043015)	R3HDM2 (ENSAMXG00000017180)	stac3 (ENSAMXG00000032605)	NXPH4 (ENSAMXG00000017162)	shmt2 (ENSAMXG00000036404)	NDUFA4L2 (ENSAMXG00000031579)	rbm19 (ENSAMXG00000017073)	epha2a (ENSAMXG00000017007)	H6PD (ENSAMXG00000016984)	ENSAMXG00000043029	tardbpb (ENSAMXG00000039549)	PTPRG (ENSAMXG00000016917)	cfap20dc (ENSAMXG00000016907)	ENSAMXG00000039967 ##22	FAM107A (ENSAMXG00000027682)	CAMK1 (ENSAMXG00000038879)	pbrm1l (ENSAMXG00000016832)	stau1 (ENSAMXG00000016812)	ENSAMXG00000016793	KCNB1 (ENSAMXG00000016765)	ptgis (ENSAMXG00000016742)	OXTR (ENSAMXG00000039096)	ENSAMXG00000016692	tarbp2 (ENSAMXG00000016665)	rsph3 (ENSAMXG00000029064)	zgc:66479 (ENSAMXG00000016650)	ENSAMXG00000016632	ENSAMXG00000034652	ENSAMXG00000016622
Cyprinoidei	ANCESTRAL SPECIES	2	ENSGT00940000162859.o	ENSGT00950000183062.a.a.a	ENSGT00940000155198.A	ENSGT00940000165371.a	ENSGT00940000155198.B	ENSGT00940000167414	ENSGT00940000164786.a	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00940000174411	ENSGT00940000154343.fb	ENSGT00940000155048.d.b	ENSGT00390000005497	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.f	ENSGT00390000003017.c.b	ENSGT00940000157304	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b	ENSGT00940000153709.A.f	ENSGT01050000244882.a.a.b.b	ENSGT00940000160763	ENSGT00940000157748	ENSGT00390000013981	ENSGT00940000160123.e.b.a.a.a	ENSGT00940000160123.e.b.a.a.b.d	ENSGT00940000160123.e.b.a.a.b.c
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	9	ENSGT00390000013995.b.a.o.a	ENSGT00390000007605.c	ENSGT00940000158065.a.b	ENSGT00940000162859.o.b	ENSGT00950000183062.a.a.a.k.b	ENSGT00940000155198.A.d	ENSGT00940000165371.a.b	ENSGT00940000167414.b	ENSGT00940000164786.a.a	ENSGT00840000129953.e	ENSGT00940000165103.b.g	ENSGT00530000063435.b.c	ENSGT00940000154343.fb.b	ENSGT00940000155048.d.b.b	ENSGT00390000005497.`b.a	ENSGT00950000183004.a.a.b.e ##22	ENSGT00940000156378.a.b.f.a	ENSGT00390000003017.c.b.c	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b.e	ENSGT00940000153709.A.f.b	ENSGT01050000244882.a.a.b.b.b	ENSGT00940000160763.f	ENSGT00940000157748.y.a	ENSGT00390000013981.c	ENSGT00940000160123.e.b.a.a.a	ENSGT00940000160123.e.b.a.a.b.d.a	ENSGT00940000160123.e.b.a.a.b.c	ENSGT00940000160123.e.b.a.b.c	ENSGT00940000160123.e.b.b.d
Goldfish	MODERN SPECIES	24	rybpb (ENSCARG00000017435)	shq1 (ENSCARG00000017391)	gxylt2 (ENSCARG00000017360)	ppp4r2b (ENSCARG00000017325)	pdzrn3b (ENSCARG00000064823)	ENSCARG00000064643	ENSCARG00000062000	ENSCARG00000056867	cntn4 (ENSCARG00000048270)	rbm19 (ENSCARG00000047670)	epha2a (ENSCARG00000047562)	H6PD (ENSCARG00000047425)	tardbpb (ENSCARG00000046951)	PTPRG (ENSCARG00000044224)	cfap20dc (ENSCARG00000044127)	ENSCARG00000044090 ##22	CAMK1 (ENSCARG00000043428)	pbrm1l (ENSCARG00000042350)	stau1 (ENSCARG00000041776)	ENSCARG00000041735	KCNB1 (ENSCARG00000041729)	ptgis (ENSCARG00000041534)	oxtrb (ENSCARG00000041511)	ENSCARG00000041481	tarbp2 (ENSCARG00000041417)	zgc:66479 (ENSCARG00000041363)	ENSCARG00000041190	igfn1.1 (ENSCARG00000040941)	GRM4 (ENSCARG00000040594)	ENSCARG00000040545	ENSCARG00000040439
Cyprininae_a	ANCESTRAL SPECIES	68	ENSGT00940000167138.c	ENSGT00390000013995.b.a.o.a	ENSGT00390000007605.c	ENSGT00940000158065.a.b	ENSGT00940000162859.o.b	ENSGT00950000183062.a.a.a.k.b	ENSGT00940000155198.A.d	ENSGT00940000165371.a.b	ENSGT00940000167414.b	ENSGT00940000164786.a.a	ENSGT00840000129953.e	ENSGT00940000165103.b.g	ENSGT00530000063435.b.c	ENSGT00940000154343.fb.b	ENSGT00940000155048.d.b.b	ENSGT00950000183004.a.a.b.e ##22	ENSGT00390000005497.ab	ENSGT00940000156378.a.b.f.a	ENSGT00390000003017.c.b.c	ENSGT00940000157304	ENSGT00940000154899.fb.b.f	ENSGT00940000153709.A.f.a	ENSGT01050000244882.a.a.b.b.a	ENSGT00940000160763.e	ENSGT00940000157748.y.b	ENSGT00390000013981.d	ENSGT00940000160123.e.b.a.a.b.d.b	ENSGT00940000160123.e.b.a.b.d	ENSGT00940000160123.e.b.b.c	ENSGT01030000234648.a.b.a.a.a.f.b.d	ENSGT00390000008414.g.a
Common carp reference	MODERN SPECIES	16	gxylt2 (ENSCCRG00000063702)	ppp4r2b (ENSCCRG00000059825)	pdzrn3b (ENSCCRG00000007526)	ENSCCRG00000057316	ENSCCRG00000025712	ENSCCRG00000052646	ENSCCRG00000036239	ENSCCRG00000064191	ENSCCRG00000005897	cntn4 (ENSCCRG00000068682)	rbm19 (ENSCCRG00000007728)	epha2a (ENSCCRG00000062010)	ENSCCRG00000057366	tardbpb (ENSCCRG00000048153)	PTPRG (ENSCCRG00000071645)	ENSCCRG00000061356 ##22	cfap20dc (ENSCCRG00000017302)	FAM107A (ENSCCRG00000017297)	ENSCCRG00000051146	pbrm1l (ENSCCRG00000051904)	stau1 (ENSCCRG00000051957)	ENSCCRG00000072372	ptgis (ENSCCRG00000043465)	oxtrb (ENSCCRG00000001302)	ENSCCRG00000044680	tarbp2 (ENSCCRG00000044694)	zgc:66479 (ENSCCRG00000044701)	ENSCCRG00000044705	igfn1.1 (ENSCCRG00000061957)	ENSCCRG00000022902	ENSCCRG00000032290
Cyprininae	ANCESTRAL SPECIES	140	ENSGT00940000158065.b	ENSGT00940000162859.o.a	ENSGT00950000183062.a.a.a.k.a	ENSGT00940000155198.A.c	ENSGT00940000165371.a.a	ENSGT00940000167414.a	ENSGT00940000164786.a.b	ENSGT00840000129953.f	ENSGT00940000165103.b.h	ENSGT00530000063435.b.d	ENSGT00940000162218	ENSGT00940000174411	ENSGT00940000154343.fb.a	ENSGT00940000155048.d.b.a	ENSGT00390000005497.`b.b	ENSGT00950000183004.a.a.b.f ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.f.b	ENSGT00390000003017.c.b.d	ENSGT00940000165342.a
Goldfish	MODERN SPECIES	46	ENSCARG00000000426	UNC80 (ENSCARG00000000636)	psmb3 (ENSCARG00000000927)	ENSCARG00000000936	ENSCARG00000000952	faimb (ENSCARG00000000956)	AGAP1 (ENSCARG00000001050)	gbx2 (ENSCARG00000001380)	iqca1 (ENSCARG00000001386)	ackr3b (ENSCARG00000001402)	trim63a (ENSCARG00000001405)	mlpha (ENSCARG00000001411)	ENSCARG00000001421	st6gal2b (ENSCARG00000001439)	tmtops2a (ENSCARG00000001444)	ENSCARG00000001449 ##22	ENSCARG00000001450	CAMK1 (ENSCARG00000001523)	pbrm1l (ENSCARG00000002473)	stau1 (ENSCARG00000002703)	ENSCARG00000002752	ENSCARG00000002766	KCNB1 (ENSCARG00000002771)	ptgis (ENSCARG00000002797)	oxtrb (ENSCARG00000002964)	ENSCARG00000002974	tarbp2 (ENSCARG00000002986)	zgc:66479 (ENSCARG00000002990)	ENSCARG00000003001	ENSCARG00000003035	igfn1.1 (ENSCARG00000003061)
Cyprininae_a	ANCESTRAL SPECIES	20	ENSGT00940000158065.b	ENSGT00940000162859.o.a	ENSGT00950000183062.a.a.a.k.a	ENSGT00940000155198.A.c	ENSGT00940000165371.a.a	ENSGT00940000167414.a	ENSGT00940000164786.a.b	ENSGT00840000129953.f	ENSGT00940000165103.b.h	ENSGT00530000063435.b.d	ENSGT00940000162218	ENSGT00940000174411	ENSGT00940000154343.fb.a	ENSGT00940000155048.d.b.a	ENSGT00390000005497.`b.b	ENSGT00950000183004.a.a.b.f ##22	ENSGT00390000005497.`b.a	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b.f.b	ENSGT00390000003017.c.b.d	ENSGT00940000165342.a	ENSGT00390000008325.b.a	ENSGT00940000154899.fb.b.e	ENSGT00940000153709.A.f.b	ENSGT01050000244882.a.a.b.b.b	ENSGT00940000160763.f	ENSGT00940000157748.y.a	ENSGT00390000013981.c	ENSGT00940000160123.e.b.a.a.a	ENSGT00940000160123.e.b.a.a.b.d.a	ENSGT00940000160123.e.b.a.a.b.c
Golden-line barbel	MODERN SPECIES	550						ENSSGRG00000027559	ENSSGRG00000025974	ENSSGRG00000025833	cntn4 (ENSSGRG00000025555)	epha2a (ENSSGRG00000025474)	H6PD (ENSSGRG00000025427)	rbp7b (ENSSGRG00000025426)	cenps (ENSSGRG00000025425)	tardbpb (ENSSGRG00000025301)	PTPRG (ENSSGRG00000025098)	ENSSGRG00000025091 ##22	ENSSGRG00000025090	CAMK1 (ENSSGRG00000025089)	pbrm1l (ENSSGRG00000022093)	ENSSGRG00000021989	KCNB1 (ENSSGRG00000021988)	ptgis (ENSSGRG00000021983)	oxtrb (ENSSGRG00000021982)
Common carp reference	MODERN SPECIES	10	shq1 (ENSCCRG00000060346)	gxylt2 (ENSCCRG00000066461)	ppp4r2b (ENSCCRG00000002302)	pdzrn3b (ENSCCRG00000002306)	ENSCCRG00000047782	ENSCCRG00000018444	ENSCCRG00000018336	cntn4 (ENSCCRG00000066369)	rbm19 (ENSCCRG00000008461)	epha2a (ENSCCRG00000068142)	ENSCCRG00000072777	rbp7b (ENSCCRG00000061221)	tardbpb (ENSCCRG00000013752)	ENSCCRG00000051131	ENSCCRG00000060611	ENSCCRG00000051140 ##22	ENSCCRG00000079479	pbrm1l (ENSCCRG00000051197)	ENSCCRG00000052029	ENSCCRG00000054613	ENSCCRG00000063232	ptgis (ENSCCRG00000052040)	oxtrb (ENSCCRG00000046824)	ENSCCRG00000041979	ENSCCRG00000041972	zgc:66479 (ENSCCRG00000041969)	ENSCCRG00000041964	ENSCCRG00000074886	ENSCCRG00000032304	igfn1.1 (ENSCCRG00000032296)	ENSCCRG00000065215
Zebrafish	MODERN SPECIES	21	pdzrn3b (ENSDARG00000073869)	ENSDARG00000053454	ENSDARG00000103109	ENSDARG00000104277	ENSDARG00000112767	cntn4 (ENSDARG00000098161)	rbm19 (ENSDARG00000042590)	epha2a (ENSDARG00000017354)	H6PD (ENSDARG00000060153)	rbp7b (ENSDARG00000070486)	cenps (ENSDARG00000070485)	tardbpb (ENSDARG00000040031)	PTPRG (ENSDARG00000060123)	cfap20dc (ENSDARG00000026086)	ENSDARG00000096954	ENSDARG00000091625 ##22	FAM107A (ENSDARG00000075540)	CAMK1 (ENSDARG00000060116)	pbrm1l (ENSDARG00000077038)	stau1 (ENSDARG00000044182)	ENSDARG00000028862	ENSDARG00000079897	KCNB1 (ENSDARG00000060095)	ptgis (ENSDARG00000060094)	oxtrb (ENSDARG00000044175)	ENSDARG00000053311	tarbp2 (ENSDARG00000070471)	zgc:66479 (ENSDARG00000008732)	ENSDARG00000075926	ENSDARG00000086028	ENSDARG00000097613
Clupeiformes	ANCESTRAL SPECIES	27	ENSGT01030000234549.a.a.a.a.a.b.b.a.c	ENSGT00940000155820.a.a	ENSGT00940000156409	ENSGT00940000153629.a.a.b	ENSGT00940000166173	ENSGT00510000046608.B	ENSGT00940000157279	ENSGT00390000002873	ENSGT01030000234637.b.d.a.a	ENSGT00940000153456.b.b	ENSGT00590000083094.a.a.c.a ##17	ENSGT00940000160100	ENSGT00390000005214	ENSGT00940000155048.d.a	ENSGT00510000047967	ENSGT00950000183004.a.a.b ##22	ENSGT00390000011228.b.a.e.b	ENSGT00940000156378.a.b	ENSGT00390000003017.c.b	ENSGT00390000005315	ENSGT00530000063113.B	ENSGT00940000155285.a	ENSGT00950000183156.a.b.b.b.b.b	ENSGT00390000006658.a.a	ENSGT00390000014941	ENSGT00940000155326.b	ENSGT00950000183202.a.a	ENSGT00940000158986	ENSGT00940000153717.a.b	ENSGT00390000014105	ENSGT00530000063880.a
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	21	rhol (ENSCHAG00000025884)	ADAMTS9 (ENSCHAG00000025948)	prickle2b (ENSCHAG00000026382)	slc2a9l1 (ENSCHAG00000026386)	psmd6 (ENSCHAG00000026389)	ATXN7 (ENSCHAG00000026399)	thoc7 (ENSCHAG00000026411)	ENSCHAG00000026422	SYNPR (ENSCHAG00000026426)	nampt2 (ENSCHAG00000026435)	ENSCHAG00000026464 ##17	fezf2 (ENSCHAG00000026734)	C3orf14 (ENSCHAG00000000696)	ptprga (ENSCHAG00000001641)	FHIT (ENSCHAG00000009456)	ENSCHAG00000009477 ##22	FAM107A (ENSCHAG00000009493)	ccdc3b (ENSCHAG00000009526)	CAMK1 (ENSCHAG00000009558)	prelid3b (ENSCHAG00000009883)	aurka (ENSCHAG00000009943)	slc32a1 (ENSCHAG00000010318)	ARHGAP40 (ENSCHAG00000010341)	PPP1R16B (ENSCHAG00000010420)	fam210b (ENSCHAG00000010506)	ENSCHAG00000010521	shmt2 (ENSCHAG00000010569)	STAC3 (ENSCHAG00000012579)	R3HDM2 (ENSCHAG00000012793)	INHBC (ENSCHAG00000014032)	gli1 (ENSCHAG00000014040)
Atlantic herring	MODERN SPECIES	21	MTMR14 (ENSCHAG00000015196)	LHFPL4 (ENSCHAG00000015155)	SETD5 (ENSCHAG00000015104)	si:dkey-19e4.5 (ENSCHAG00000014997)	ENSCHAG00000011526	ACVR1B (ENSCHAG00000010652)	prkag1 (ENSCHAG00000010096)	rhebl1 (ENSCHAG00000010034)	LMBR1L (ENSCHAG00000009084)	H6PD (ENSCHAG00000009024)	rbp7b (ENSCHAG00000009016)	cenps (ENSCHAG00000008947)	tardbpb (ENSCHAG00000008909)	PTPRG (ENSCHAG00000006183)	cfap20dc (ENSCHAG00000006097)	ENSCHAG00000006085 ##22	FAM107A (ENSCHAG00000006070)	CAMK1 (ENSCHAG00000005650)	pbrm1l (ENSCHAG00000001452)	romo1 (ENSCHAG00000000530)	ergic3 (ENSCHAG00000000305)	mych (ENSCHAG00000000269)	mtss1 (ENSCHAG00000000223)	osgn1 (ENSCHAG00000026388)	pigu (ENSCHAG00000026383)	PTPRT (ENSCHAG00000024252)	rbl1 (ENSCHAG00000024062)	CHD6 (ENSCHAG00000020596)	ripor3 (ENSCHAG00000020493)	blcap (ENSCHAG00000020484)	TMEM74B (ENSCHAG00000020470)
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	3	ENSDCDG00000017381	slc45a3 (ENSDCDG00000017379)	prickle2b (ENSDCDG00000017367)	slc2a9l1 (ENSDCDG00000017364)	psmd6 (ENSDCDG00000017348)	ATXN7 (ENSDCDG00000017336)	thoc7 (ENSDCDG00000017329)	SYNPR (ENSDCDG00000017325)	nampt2 (ENSDCDG00000016915)	ENSDCDG00000016705 ##17	fezf2 (ENSDCDG00000035324)	C3orf14 (ENSDCDG00000035321)	ENSDCDG00000035319	ptprga (ENSDCDG00000035017)	FHIT (ENSDCDG00000034929)	ENSDCDG00000034926 ##22	FAM107A (ENSDCDG00000034924)	ccdc3b (ENSDCDG00000034922)	CAMK1 (ENSDCDG00000034765)	prelid3b (ENSDCDG00000034757)	aurka (ENSDCDG00000034756)	slc32a1 (ENSDCDG00000034755)	ARHGAP40 (ENSDCDG00000034753)	PPP1R16B (ENSDCDG00000034751)	fam210b (ENSDCDG00000034750)	NDUFA4L2 (ENSDCDG00000034749)	shmt2 (ENSDCDG00000034339)	NXPH4 (ENSDCDG00000034291)	STAC3 (ENSDCDG00000034285)	R3HDM2 (ENSDCDG00000034227)	INHBC (ENSDCDG00000034210)
Denticle herring	MODERN SPECIES	3	SETD5 (ENSDCDG00000034397)	si:dkey-19e4.5 (ENSDCDG00000034391)	ENSDCDG00000033657	ACVR1B (ENSDCDG00000033435)	prkag1 (ENSDCDG00000032093)	rhebl1 (ENSDCDG00000032028)	LMBR1L (ENSDCDG00000031869)	ENSDCDG00000031850	H6PD (ENSDCDG00000031848)	rbp7b (ENSDCDG00000031844)	cenps (ENSDCDG00000031841)	tardbpb (ENSDCDG00000031829)	PTPRG (ENSDCDG00000030697)	cfap20dc (ENSDCDG00000030667)	ENSDCDG00000030665	ENSDCDG00000030659 ##22	FAM107A (ENSDCDG00000030655)	CAMK1 (ENSDCDG00000030451)	pbrm1l (ENSDCDG00000030227)	romo1 (ENSDCDG00000030188)	ergic3 (ENSDCDG00000030167)	mych (ENSDCDG00000030164)	mtss1 (ENSDCDG00000029835)	osgn1 (ENSDCDG00000029815)	pigu (ENSDCDG00000029812)	PTPRT (ENSDCDG00000027280)	rbl1 (ENSDCDG00000027171)	ENSDCDG00000027152	CHD6 (ENSDCDG00000026345)	ripor3 (ENSDCDG00000026314)	blcap (ENSDCDG00000026312)
Spotted gar	MODERN SPECIES	671	slc2a9l1 (ENSLOCG00000010306)	psmd6 (ENSLOCG00000010311)	ATXN7 (ENSLOCG00000010319)	thoc7 (ENSLOCG00000010342)	ENSLOCG00000010350	SNTN (ENSLOCG00000010361)	SYNPR (ENSLOCG00000010367)	nampt2 (ENSLOCG00000010385)	ENSLOCG00000010394 ##17	fezf2 (ENSLOCG00000010412)	C3orf14 (ENSLOCG00000010418)	ptprga (ENSLOCG00000010428)	ENSLOCG00000010456	ENSLOCG00000010463	cfap20dc (ENSLOCG00000010469)	ENSLOCG00000010476 ##22	FAM107A (ENSLOCG00000010486)	ccdc3b (ENSLOCG00000010493)	CAMK1 (ENSLOCG00000010502)	nek4 (ENSLOCG00000010516)	spcs1 (ENSLOCG00000010522)	glt8d1 (ENSLOCG00000010530)	gnl3 (ENSLOCG00000010542)	PBRM1 (ENSLOCG00000010556)	UQCC5 (ENSLOCG00000010575)	stab1 (ENSLOCG00000010584)	NISCH (ENSLOCG00000010609)	rad18 (ENSLOCG00000010629)	oxtrb (ENSLOCG00000010646)	cav3 (ENSLOCG00000010650)	ENSLOCG00000018247
Reedfish	MODERN SPECIES	9	prickle2b (ENSECRG00000015265)	psmd6 (ENSECRG00000015115)	ATXN7 (ENSECRG00000015061)	thoc7 (ENSECRG00000014809)	ENSECRG00000014753	SNTN (ENSECRG00000014716)	SYNPR (ENSECRG00000014669)	nampt2 (ENSECRG00000014617)	ENSECRG00000014574 ##17	fezf2 (ENSECRG00000014533)	PTPRG (ENSECRG00000014476)	ENSECRG00000014424	ENSECRG00000014367	FHIT (ENSECRG00000014295)	cfap20dc (ENSECRG00000014236)	ENSECRG00000014187 ##22	FAM107A (ENSECRG00000014165)	ccdc3b (ENSECRG00000014043)	CAMK1 (ENSECRG00000013927)	nek4 (ENSECRG00000013827)	spcs1 (ENSECRG00000013788)	glt8d1 (ENSECRG00000013772)	ENSECRG00000019944	ENSECRG00000019913	PBRM1 (ENSECRG00000019732)	UQCC5 (ENSECRG00000019677)	NT5DC2 (ENSECRG00000019645)	RBSN (ENSECRG00000019602)	mrps25 (ENSECRG00000019558)	nr2c2 (ENSECRG00000019474)	FGD5 (ENSECRG00000019175)
Elephant shark	MODERN SPECIES	1523	ADAMTS9 (ENSCMIG00000006593)	prickle2b (ENSCMIG00000006543)	psmd6 (ENSCMIG00000006524)	ATXN7 (ENSCMIG00000006518)	thoc7 (ENSCMIG00000006513)	ENSCMIG00000006510	synprb (ENSCMIG00000006509)	nampt2 (ENSCMIG00000006309)	ENSCMIG00000005879 ##17	fezf2 (ENSCMIG00000005676)	ENSCMIG00000005665	ptprga (ENSCMIG00000004939)	FHIT (ENSCMIG00000004767)	CFAP20DC (ENSCMIG00000004756)	ENSCMIG00000004752	ENSCMIG00000004720 ##22	FAM107A (ENSCMIG00000004706)	ACOX2 (ENSCMIG00000004575)	kctd6a (ENSCMIG00000004512)
Ciona	ANCESTRAL SPECIES																	ENSGT00950000183004.a.a.b ##22
Ciona savignyi	MODERN SPECIES	236	ENSCSAVG00000010791	ENSCSAVG00000010790	ENSCSAVG00000010787	ENSCSAVG00000010765	ENSCSAVG00000010764	ENSCSAVG00000010763	ENSCSAVG00000010762	ENSCSAVG00000010721	ENSCSAVG00000010720	ENSCSAVG00000010715	ENSCSAVG00000010713	ENSCSAVG00000010697	ENSCSAVG00000010693	ENSCSAVG00000010683	ENSCSAVG00000010682	ENSCSAVG00000010681 ##22	ENSCSAVG00000010678	ENSCSAVG00000010677	ENSCSAVG00000010676	ENSCSAVG00000010669	ENSCSAVG00000010668	ENSCSAVG00000010666	ENSCSAVG00000010662	ENSCSAVG00000010661	ENSCSAVG00000010660	ENSCSAVG00000010658	ENSCSAVG00000010657	ENSCSAVG00000010655	ENSCSAVG00000010653	ENSCSAVG00000010652	ENSCSAVG00000010650
Ciona intestinalis	MODERN SPECIES	154									ENSCING00000008181	ENSCING00000024391	ENSCING00000002557	ENSCING00000017297	ENSCING00000002567	ENSCING00000022194	ENSCING00000022555	ENSCING00000017296 ##22	ENSCING00000020043
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183004.b ##22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183004.b ##22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183004.b ##22
Lamprey	MODERN SPECIES	4655																ENSPMAG00000004956 ##22
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00950000183004 #22
Caenorhabditis elegans	MODERN SPECIES	3	Y38F2AR.10 (WBGene00021428)	eri-5 (WBGene00021419)	trap-3 (WBGene00021420)	sec-61.B (WBGene00021427)	Y38F2AR.3 (WBGene00021421)	tftc-1 (WBGene00021423)	ppgn-1 (WBGene00021425)	nhr-236 (WBGene00021417)	nsy-4 (WBGene00021415)	Y38F2AL.12 (WBGene00219413)	vha-3 (WBGene00006912)	vha-11 (WBGene00006920)	mksr-2 (WBGene00021416)	lin-1 (WBGene00002990)	M70.5 (WBGene00019787)	M70.4 (WBGene00019786) #22	M70.1 (WBGene00019783)	M70.2 (WBGene00019784)	M70.3 (WBGene00019785)	fnip-2 (WBGene00020208)	T04C4.3 (WBGene00235277)	Y71G10AR.4 (WBGene00044650)	hrpu-2 (WBGene00022134)	C54E4.1 (WBGene00016917)	C54E4.4 (WBGene00016919)	gcy-37 (WBGene00001557)	C54E4.5 (WBGene00016920)	C54E4.12 (WBGene00235274)	test-1 (WBGene00016918)	C23H5.12 (WBGene00077523)	prmt-6 (WBGene00016023)