Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.b #12	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Glires	ANCESTRAL SPECIES	9	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.b #12	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.b #12	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.b #12	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Hystricomorpha	ANCESTRAL SPECIES	7	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.c ##7	ENSGT00950000183018.b.k.a.d #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.b #12	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000034042 #7	OR13D1 (ENSHGLG00000020669) #8	ENSHGLG00000004704 #9	ENSHGLG00000049175 #10	OR13C3 (ENSHGLG00000020079) #11	OR13C4 (ENSHGLG00000047893) #12	OR13F1 (ENSHGLG00000005682) #13	ENSHGLG00000032079 #14	ENSHGLG00000049812 #15	SMC2 (ENSHGLG00000007747) #16	ENSHGLG00000049087 #17	ENSHGLG00000012037 #18	ENSHGLG00000041020 #19	ENSHGLG00000008760 #20	ENSHGLG00000032676 #21	GRIN3A (ENSHGLG00000014346) #22	RNF20 (ENSHGLG00000016128) #23	PGAP4 (ENSHGLG00000008776) #24	ALDOB (ENSHGLG00000010812) #25	ZNF189 (ENSHGLG00000011643) #26	MRPL50 (ENSHGLG00000004483) #27	ENSHGLG00000042541 #28	BAAT (ENSHGLG00000006846) #29	ENSHGLG00000037623 #30	PLPPR1 (ENSHGLG00000008477) #31	MURC (ENSHGLG00000035685) #32	TMEFF1 (ENSHGLG00000003019) #33	MSANTD3 (ENSHGLG00000004426) #34	TEX10 (ENSHGLG00000004561) #35	INVS (ENSHGLG00000005116) #36	ENSHGLG00000032583 #37
Hystricomorpha_a	ANCESTRAL SPECIES	5	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.c ##7	ENSGT00950000183018.b.k.a.d #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.b #12	ENSGT00940000162868 #13	ENSGT00550000074857 #16	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a
Guinea pig	MODERN SPECIES	27	FKTN (ENSCPOG00000036881)	FSD1L (ENSCPOG00000007088)	SLC44A1 (ENSCPOG00000015289)	ABCA1 (ENSCPOG00000009387)	ENSCPOG00000038625 ##7	ENSCPOG00000009373 #7	OR13D1 (ENSCPOG00000005936) #8	ENSCPOG00000019951 ##12	ENSCPOG00000039329 #9	ENSCPOG00000037364 ##12	ENSCPOG00000031883 #11	ENSCPOG00000013656 ##12	ENSCPOG00000007377 #11	OR13C4 (ENSCPOG00000031054) #12	SMC2 (ENSCPOG00000008189) #16	GRIN3A (ENSCPOG00000006667) #22	RNF20 (ENSCPOG00000012903) #23	PGAP4 (ENSCPOG00000015138) #24	ALDOB (ENSCPOG00000012385) #25	ZNF189 (ENSCPOG00000015555) #26	MRPL50 (ENSCPOG00000034033) #27	BAAT (ENSCPOG00000038785) #29	ENSCPOG00000031580	PLPPR1 (ENSCPOG00000006791) #31	CAVIN4 (ENSCPOG00000005674) #32	TMEFF1 (ENSCPOG00000005669) #33	TEX10 (ENSCPOG00000008514) #35	INVS (ENSCPOG00000008363) #36	ERP44 (ENSCPOG00000040125)	STX17 (ENSCPOG00000037367)	NR4A3 (ENSCPOG00000008346)
Hystricomorpha_b	ANCESTRAL SPECIES	11	ENSGT00940000162158	ENSGT00940000162582	ENSGT00940000156411	ENSGT00390000018845.e	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.d #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT00940000162868 #13	ENSGT00550000074857 #16	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a
Long-tailed chinchilla	MODERN SPECIES	126	RAD23B (ENSCLAG00000010897)	ENSCLAG00000011424	ZNF462 (ENSCLAG00000016925)	TMEM38B (ENSCLAG00000014738)	TAL2 (ENSCLAG00000012271)	FKTN (ENSCLAG00000010039)	FSD1L (ENSCLAG00000010824)	SLC44A1 (ENSCLAG00000015036)	ABCA1 (ENSCLAG00000015148)	ENSCLAG00000012516 #7	ENSCLAG00000013135 #7	OR13D1 (ENSCLAG00000017813) #8	ENSCLAG00000018070 #9	OR13F1 (ENSCLAG00000017722) #13	SMC2 (ENSCLAG00000010498) #16	GRIN3A (ENSCLAG00000009983) #22	ENSCLAG00000012103	RNF20 (ENSCLAG00000013001) #23	PGAP4 (ENSCLAG00000010478) #24	ALDOB (ENSCLAG00000013299) #25	ZNF189 (ENSCLAG00000013678) #26	MRPL50 (ENSCLAG00000010221) #27	BAAT (ENSCLAG00000013825) #29	PLPPR1 (ENSCLAG00000014192) #31	CAVIN4 (ENSCLAG00000014331) #32	TMEFF1 (ENSCLAG00000010573) #33	TEX10 (ENSCLAG00000011567) #35	INVS (ENSCLAG00000012495) #36	ERP44 (ENSCLAG00000014199)	STX17 (ENSCLAG00000013623)	NR4A3 (ENSCLAG00000011240)
Degu	MODERN SPECIES	135	SLC44A1 (ENSODEG00000004590)	ENSODEG00000004309	ABCA1 (ENSODEG00000005925)	ENSODEG00000004959 #7	ENSODEG00000004904 #7	ENSODEG00000019193 #9	ENSODEG00000004859	OR13C4 (ENSODEG00000004667) #12	ENSODEG00000004581	ENSODEG00000004541	SMC2 (ENSODEG00000004258) #16	ENSODEG00000019030	ENSODEG00000004824	ENSODEG00000004804	PPP3R2 (ENSODEG00000004786)	GRIN3A (ENSODEG00000004363) #22	ENSODEG00000004153 #23	ENSODEG00000019053 #24	ENSODEG00000004110 ##10	ALDOB (ENSODEG00000004052) #25	ZNF189 (ENSODEG00000005286) #26	MRPL50 (ENSODEG00000005275) #27	BAAT (ENSODEG00000005191) #29	PLPPR1 (ENSODEG00000005164) #31
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.f #7	ENSGT00950000183018.b.k.a.e #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Marmotini	ANCESTRAL SPECIES	1	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.f #7	ENSGT00950000183018.b.k.a.e #7	ENSGT01040000240406.A.b.a.b.s.a #8	ENSGT01040000240406.A.b.a.b.t.a #8	ENSGT01040000240406.A.b.a.b.t.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Marmotini_b	ANCESTRAL SPECIES	2	ENSGT00940000154658.b	ENSGT00950000183018.b.k.b ##7	ENSGT01040000240406.A.b.a.b.s.b #8	ENSGT01040000240406.A.b.a.b.s.a #8	ENSGT01040000240406.A.b.a.b.t.a #8	ENSGT01040000240406.A.b.a.b.t.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Squirrel	MODERN SPECIES	124															ENSSTOG00000004766	GRIN3A (ENSSTOG00000002475) #22	RNF20 (ENSSTOG00000027656) #23	PGAP4 (ENSSTOG00000007055) #24	ALDOB (ENSSTOG00000007034) #25	ZNF189 (ENSSTOG00000024337) #26	MRPL50 (ENSSTOG00000026770) #27	BAAT (ENSSTOG00000020683) #29	ENSSTOG00000025846 ##29	PLPPR1 (ENSSTOG00000001576) #31	CAVIN4 (ENSSTOG00000015661) #32	TMEFF1 (ENSSTOG00000015655) #33	MSANTD3 (ENSSTOG00000026763) #34	TEX10 (ENSSTOG00000010151) #35	INVS (ENSSTOG00000010139) #36	ERP44 (ENSSTOG00000010127)	STX17 (ENSSTOG00000010118)
Arctic ground squirrel	MODERN SPECIES	19	SLC44A1 (ENSUPAG00010014647)	ABCA1 (ENSUPAG00010014737)	NIPSNAP3B (ENSUPAG00010014783) ##7	ENSUPAG00010014870 #8	ENSUPAG00010014879 #8	ENSUPAG00010014882 #8	ENSUPAG00010014884 #8	ENSUPAG00010014889 ##12	ENSUPAG00010014897 #9	ENSUPAG00010014902 ##12	OR13C3 (ENSUPAG00010014917) #11	OR13F1 (ENSUPAG00010014923) #13	ENSUPAG00010014932 #15	SMC2 (ENSUPAG00010014939) #16	ENSUPAG00010015011 #21	GRIN3A (ENSUPAG00010015019) #22	RNF20 (ENSUPAG00010015055) #23	PGAP4 (ENSUPAG00010015128) #24	ALDOB (ENSUPAG00010015132) #25	ZNF189 (ENSUPAG00010015145) #26	MRPL50 (ENSUPAG00010015153) #27	BAAT (ENSUPAG00010015156) #29	ENSUPAG00010015161	PLPPR1 (ENSUPAG00010015166) #31	CAVIN4 (ENSUPAG00010015173) #32	TMEFF1 (ENSUPAG00010015180) #33	TEX10 (ENSUPAG00010015228) #35	INVS (ENSUPAG00010015254) #36	ERP44 (ENSUPAG00010015433)	STX17 (ENSUPAG00010015454)	NR4A3 (ENSUPAG00010015475)
Alpin marmot	MODERN SPECIES	30	ENSMMMG00000003848 #7	ENSMMMG00000003883 #7	ENSMMMG00000003893 #8	ENSMMMG00000003902 #8	ENSMMMG00000003908 #8	ENSMMMG00000003910 #8	ENSMMMG00000003917 ##12	ENSMMMG00000003927 #9	ENSMMMG00000003934 #9	ENSMMMG00000003935 ##12	OR13C8 (ENSMMMG00000003941) ##12	OR13C3 (ENSMMMG00000003944) #11	OR13F1 (ENSMMMG00000003956) #13	ENSMMMG00000003962 #15	SMC2 (ENSMMMG00000003971) #16	GRIN3A (ENSMMMG00000004037) #22	ENSMMMG00000004086	RNF20 (ENSMMMG00000004104) #23	PGAP4 (ENSMMMG00000004146) #24	ALDOB (ENSMMMG00000004150) #25	ZNF189 (ENSMMMG00000004162) #26	MRPL50 (ENSMMMG00000004177) #27	BAAT (ENSMMMG00000004181) #29	ENSMMMG00000004195 ##29	PLPPR1 (ENSMMMG00000004212) #31	CAVIN4 (ENSMMMG00000004236) #32	ENSMMMG00000004244 #33	MSANTD3 (ENSMMMG00000004255) #34	TEX10 (ENSMMMG00000004278) #35	INVS (ENSMMMG00000004317) #36	ENSMMMG00000004415
Eurasian red squirrel	MODERN SPECIES	6	NIPSNAP3A (ENSSVLG00005023053) #7	OR13D1 (ENSSVLG00005023029) #8	ENSSVLG00005023004 ##12	ENSSVLG00005022990 #9	ENSSVLG00005022984 #9	ENSSVLG00005022968 ##12	ENSSVLG00005022956 ##12	ENSSVLG00005022940 ##12	ENSSVLG00005022930 #11	ENSSVLG00005022901 #11	OR13F1 (ENSSVLG00005022886) #13	ENSSVLG00005022873 #15	SMC2 (ENSSVLG00005022706) #16	ENSSVLG00005022668 #21	ENSSVLG00005022639	GRIN3A (ENSSVLG00005022487) #22	RNF20 (ENSSVLG00005022444) #23	PGAP4 (ENSSVLG00005022426) #24	ENSSVLG00005022415	ALDOB (ENSSVLG00005022272) #25	ZNF189 (ENSSVLG00005022220) #26	ENSSVLG00005022189 #27	BAAT (ENSSVLG00005022141) #29	ENSSVLG00005022075 ##29	PLPPR1 (ENSSVLG00005022005) #31	ENSSVLG00005021949	CAVIN4 (ENSSVLG00005021929) #32	TMEFF1 (ENSSVLG00005021870) #33	TEX10 (ENSSVLG00005021757) #35	INVS (ENSSVLG00005021701) #36	ERP44 (ENSSVLG00005021657)
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Muroidea	ANCESTRAL SPECIES	1	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Cricetinae	ANCESTRAL SPECIES	21	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000158571 #22	ENSGT00940000165130	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031
Chinese hamster chok1gshd	MODERN SPECIES	111	Abca1 (ENSCGRG00001017941)	Nipsnap3b (ENSCGRG00001021994) #7	Nipsnap3a (ENSCGRG00001022581) #7	Or13d1 (ENSCGRG00001005236) #8	ENSCGRG00001004875 #9	ENSCGRG00001018517	ENSCGRG00001007159 ##12	ENSCGRG00001008686 ##12	ENSCGRG00001008579 ##12	ENSCGRG00001008527 #11	ENSCGRG00001010069 #11	Or13f5 (ENSCGRG00001012146) #13	Toporsl (ENSCGRG00001011956) #15	Smc2 (ENSCGRG00001015546) #16	ENSCGRG00001018551 #21	Grin3a (ENSCGRG00001020666) #22	Rnf20 (ENSCGRG00001016760) #23	Pgap4 (ENSCGRG00001004180) #24	ENSCGRG00001022613	Aldob (ENSCGRG00001018754) #25	Zfp189 (ENSCGRG00001022874) #26	Mrpl50 (ENSCGRG00001023970) #27	Baat (ENSCGRG00001024533) #29	ENSCGRG00001001248 ##29	Plppr1 (ENSCGRG00001022554) #31	ENSCGRG00001009406	Cavin4 (ENSCGRG00001018281) #32	Tmeff1 (ENSCGRG00001021081) #33	Msantd3 (ENSCGRG00001023156) #34	Tex10 (ENSCGRG00001023462) #35	Invs (ENSCGRG00001024651) #36
Golden Hamster	MODERN SPECIES	703																Grin3a (ENSMAUG00000021268) #22	Ppp3r2 (ENSMAUG00000002415)	Rnf20 (ENSMAUG00000010429) #23	Pgap4 (ENSMAUG00000017886) #24	Aldob (ENSMAUG00000012988) #25	Zfp189 (ENSMAUG00000014595) #26	Mrpl50 (ENSMAUG00000002882) #27	Baat (ENSMAUG00000009479) #29	ENSMAUG00000013363 ##29	Plppr1 (ENSMAUG00000010325) #31	Cavin4 (ENSMAUG00000017883) #32	Tmeff1 (ENSMAUG00000021231) #33	Tex10 (ENSMAUG00000016306) #35	Invs (ENSMAUG00000015926) #36	Erp44 (ENSMAUG00000001134)	ENSMAUG00000010249
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Northern American deer mouse	MODERN SPECIES	11	ENSPEMG00000029455	Fktn (ENSPEMG00000026889)	Fsd1l (ENSPEMG00000017531)	Slc44a1 (ENSPEMG00000009580)	Abca1 (ENSPEMG00000008711)	Nipsnap3b (ENSPEMG00000013598) #7	Nipsnap3a (ENSPEMG00000009266) #7	Or13d1 (ENSPEMG00000008885) #8	ENSPEMG00000016440 #9	Or13c25 (ENSPEMG00000010413) ##12	Or13c3 (ENSPEMG00000007908) #11	Or13f5 (ENSPEMG00000026506) #13	Smc2 (ENSPEMG00000011010) #16	ENSPEMG00000020258 #21	Ppp3r2 (ENSPEMG00000002128)	Grin3a (ENSPEMG00000000322) #22	ENSPEMG00000026167	Pgap4 (ENSPEMG00000008340) #24	Aldob (ENSPEMG00000009090) #25	Zfp189 (ENSPEMG00000009744) #26	Mrpl50 (ENSPEMG00000027685) #27	Baat (ENSPEMG00000010646) #29	ENSPEMG00000011383 ##29	Plppr1 (ENSPEMG00000012426) #31	Cavin4 (ENSPEMG00000013106) #32	ENSPEMG00000012932	Tmeff1 (ENSPEMG00000009717) #33	Msantd3 (ENSPEMG00000010737) #34	Tex10 (ENSPEMG00000011547) #35	Invs (ENSPEMG00000014137) #36	Erp44 (ENSPEMG00000016094)
Prairie vole	MODERN SPECIES	355	Tmem38b (ENSMOCG00000017340)	Tal2 (ENSMOCG00000003929)	Fktn (ENSMOCG00000022995)	Fsd1l (ENSMOCG00000022827)	Slc44a1 (ENSMOCG00000010191)	Abca1 (ENSMOCG00000012458)	ENSMOCG00000011792 #7	Nipsnap3a (ENSMOCG00000018651) #7	Or13d1 (ENSMOCG00000011253) #8	ENSMOCG00000003067 #9	Or13c3 (ENSMOCG00000000485) #11	Toporsl (ENSMOCG00000002980) #15	Smc2 (ENSMOCG00000010061) #16	ENSMOCG00000014727 #21	Ppp3r2 (ENSMOCG00000015134)	Grin3a (ENSMOCG00000021661) #22	Rnf20 (ENSMOCG00000012644) #23	Pgap4 (ENSMOCG00000000519) #24	Aldob (ENSMOCG00000018833) #25	Zfp189 (ENSMOCG00000020015) #26	Mrpl50 (ENSMOCG00000016919) #27	Baat (ENSMOCG00000017335) #29	ENSMOCG00000006911 ##29	Plppr1 (ENSMOCG00000021681) #31	Cavin4 (ENSMOCG00000020875) #32	Tmeff1 (ENSMOCG00000013064) #33	Msantd3 (ENSMOCG00000019148) #34	Tex10 (ENSMOCG00000013713) #35	Invs (ENSMOCG00000000650) #36	Erp44 (ENSMOCG00000008817)	Stx17 (ENSMOCG00000016881)
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.b #9	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Mus	ANCESTRAL SPECIES	3	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b
Ryukyu mouse	MODERN SPECIES	13	Tal2 (MGP_CAROLIEiJ_G0026031)	Fktn (MGP_CAROLIEiJ_G0026030)	Fsd1l (MGP_CAROLIEiJ_G0026029)	Slc44a1 (MGP_CAROLIEiJ_G0026028)	Abca1 (MGP_CAROLIEiJ_G0026027)	Nipsnap3b (MGP_CAROLIEiJ_G0026026) #7	Nipsnap3a (MGP_CAROLIEiJ_G0026025) #7	Or13d1 (MGP_CAROLIEiJ_G0026024) #8	Or13c25 (MGP_CAROLIEiJ_G0026023) ##12	Or13c3 (MGP_CAROLIEiJ_G0026022) #11	Or13f5 (MGP_CAROLIEiJ_G0026021) #13	Toporsl (MGP_CAROLIEiJ_G0026020) #15	Smc2 (MGP_CAROLIEiJ_G0026019) #16	MGP_CAROLIEiJ_G0026018 #21	Ppp3r2 (MGP_CAROLIEiJ_G0026017)	Grin3a (MGP_CAROLIEiJ_G0026016) #22	Rnf20 (MGP_CAROLIEiJ_G0026015) #23	Pgap4 (MGP_CAROLIEiJ_G0026014) #24	Aldob (MGP_CAROLIEiJ_G0026013) #25	Zfp189 (MGP_CAROLIEiJ_G0026012) #26	Mrpl50 (MGP_CAROLIEiJ_G0026011) #27	MGP_CAROLIEiJ_G0026010 #29	MGP_CAROLIEiJ_G0026009 ##29	MGP_CAROLIEiJ_G0026008 ##29	Plppr1 (MGP_CAROLIEiJ_G0026007) #31	Cavin4 (MGP_CAROLIEiJ_G0026006) #32	Tmeff1 (MGP_CAROLIEiJ_G0026005) #33	Msantd3 (MGP_CAROLIEiJ_G0026004) #34	Tex10 (MGP_CAROLIEiJ_G0026003) #35	Invs (MGP_CAROLIEiJ_G0026002) #36	Erp44 (MGP_CAROLIEiJ_G0026001)
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b.a ##29	ENSGT01010000222336.a.a.b.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031
Mouse	MODERN SPECIES	13	Tal2 (ENSMUSG00000028417)	Fktn (ENSMUSG00000028414)	Fsd1l (ENSMUSG00000054752)	Slc44a1 (ENSMUSG00000028412)	Abca1 (ENSMUSG00000015243)	Nipsnap3b (ENSMUSG00000015247) #7	Nipsnap3a (ENSMUSG00000015242) #7	Or13d1 (ENSMUSG00000070983) #8	Or13c25 (ENSMUSG00000051593) ##12	Or13c3 (ENSMUSG00000049648) #11	Or13f5 (ENSMUSG00000089717) #13	Toporsl (ENSMUSG00000028314) #15	Smc2 (ENSMUSG00000028312) #16	Cylc2 (ENSMUSG00000039555) #21	Ppp3r2 (ENSMUSG00000028310)	Grin3a (ENSMUSG00000039579) #22	Rnf20 (ENSMUSG00000028309) #23	Pgap4 (ENSMUSG00000039611) #24	Aldob (ENSMUSG00000028307) #25	Zfp189 (ENSMUSG00000039634) #26	Mrpl50 (ENSMUSG00000044018) #27	Baat (ENSMUSG00000039653) #29	Acnat1 (ENSMUSG00000070985) ##29	Acnat2 (ENSMUSG00000060317) ##29	Plppr1 (ENSMUSG00000063446) #31	Cavin4 (ENSMUSG00000028348) #32	Tmeff1 (ENSMUSG00000028347) #33	Msantd3 (ENSMUSG00000039693) #34	Tex10 (ENSMUSG00000028345) #35	Invs (ENSMUSG00000028344) #36	Erp44 (ENSMUSG00000028343)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000160867	ENSGT00390000014471	ENSGT00940000157979	ENSGT00940000157174	ENSGT00940000154658.b	ENSGT00950000183018.b.k.a.a #7	ENSGT00950000183018.b.k.a.b #7	ENSGT01040000240406.A.b.a.b #8	ENSGT01040000240406.A.b.a.a.a.a.a.a.b ##12	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #11	ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00730000111075.a #21	ENSGT00940000165130	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b.a ##29	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00390000007901 #34	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a
spretus	MODERN SPECIES	13	Tal2 (MGP_SPRETEiJ_G0026994)	Fktn (MGP_SPRETEiJ_G0026993)	Fsd1l (MGP_SPRETEiJ_G0026992)	Slc44a1 (MGP_SPRETEiJ_G0026991)	Abca1 (MGP_SPRETEiJ_G0026990)	Nipsnap3b (MGP_SPRETEiJ_G0026989) #7	Nipsnap3a (MGP_SPRETEiJ_G0026988) #7	Or13d1 (MGP_SPRETEiJ_G0026987) #8	Or13c25 (MGP_SPRETEiJ_G0026986) ##12	Or13c3 (MGP_SPRETEiJ_G0026985) #11	Or13f5 (MGP_SPRETEiJ_G0026984) #13	Toporsl (MGP_SPRETEiJ_G0026983) #15	Smc2 (MGP_SPRETEiJ_G0026982) #16	MGP_SPRETEiJ_G0026981 #21	Ppp3r2 (MGP_SPRETEiJ_G0026980)	Grin3a (MGP_SPRETEiJ_G0026979) #22	Rnf20 (MGP_SPRETEiJ_G0026978) #23	Pgap4 (MGP_SPRETEiJ_G0026977) #24	Aldob (MGP_SPRETEiJ_G0026976) #25	Zfp189 (MGP_SPRETEiJ_G0026975) #26	Mrpl50 (MGP_SPRETEiJ_G0026974) #27	Baat (MGP_SPRETEiJ_G0026973) #29	MGP_SPRETEiJ_G0026972 ##29	MGP_SPRETEiJ_G0026971 ##29	Cavin4 (MGP_SPRETEiJ_G0026969) #32	Tmeff1 (MGP_SPRETEiJ_G0026968) #33	Msantd3 (MGP_SPRETEiJ_G0026967) #34	Tex10 (MGP_SPRETEiJ_G0026966) #35	Invs (MGP_SPRETEiJ_G0026965) #36	Erp44 (MGP_SPRETEiJ_G0026964)	Stx17 (MGP_SPRETEiJ_G0026963)
Steppe mouse	MODERN SPECIES	3121															Ppp3r2 (ENSMSIG00000026790)	Grin3a (ENSMSIG00000026757) #22	Rnf20 (ENSMSIG00000026724) #23	Pgap4 (ENSMSIG00000026720) #24	Aldob (ENSMSIG00000026708) #25	Zfp189 (ENSMSIG00000026701) #26	Mrpl50 (ENSMSIG00000026695) #27	Baat (ENSMSIG00000026685) #29
Shrew mouse	MODERN SPECIES	19	Tal2 (MGP_PahariEiJ_G0028367)	Fktn (MGP_PahariEiJ_G0028366)	Fsd1l (MGP_PahariEiJ_G0028365)	Slc44a1 (MGP_PahariEiJ_G0028364)	Abca1 (MGP_PahariEiJ_G0028363)	Nipsnap3b (MGP_PahariEiJ_G0028362) #7	Nipsnap3a (MGP_PahariEiJ_G0028361) #7	Or13d1 (MGP_PahariEiJ_G0028360) #8	Or13c25 (MGP_PahariEiJ_G0028359) ##12	Or13c3 (MGP_PahariEiJ_G0028358) #11	Or13f5 (MGP_PahariEiJ_G0028357) #13	Toporsl (MGP_PahariEiJ_G0028356) #15	Smc2 (MGP_PahariEiJ_G0028355) #16	MGP_PahariEiJ_G0028354 #21	Ppp3r2 (MGP_PahariEiJ_G0028353)	Grin3a (MGP_PahariEiJ_G0028352) #22	Rnf20 (MGP_PahariEiJ_G0028351) #23	Pgap4 (MGP_PahariEiJ_G0028350) #24	Aldob (MGP_PahariEiJ_G0028349) #25	Zfp189 (MGP_PahariEiJ_G0028348) #26	Mrpl50 (MGP_PahariEiJ_G0028347) #27	Baat (MGP_PahariEiJ_G0028346) #29	MGP_PahariEiJ_G0028345 ##29	MGP_PahariEiJ_G0028344 ##29	Plppr1 (MGP_PahariEiJ_G0028343) #31	Cavin4 (MGP_PahariEiJ_G0028342) #32	Tmeff1 (MGP_PahariEiJ_G0028341) #33	Msantd3 (MGP_PahariEiJ_G0028340) #34	Tex10 (MGP_PahariEiJ_G0028339) #35	Invs (MGP_PahariEiJ_G0028338) #36	Erp44 (MGP_PahariEiJ_G0028337)
Rat	MODERN SPECIES	15	Or13c25 (ENSRNOG00000052071) ##12	Or13c3 (ENSRNOG00000070860) #11	LOC120103150 (ENSRNOG00000067730) #11	Or13c3f (ENSRNOG00000063372) #11	Or13c3b (ENSRNOG00000071075) #11	Or13c3g (ENSRNOG00000068215) #11	Or13c3c (ENSRNOG00000069301) #11	Or13c3 (ENSRNOG00000064661) #11	LOC500460 (ENSRNOG00000005666) #13	Or13f5 (ENSRNOG00000049788) #13	Toporsl (ENSRNOG00000005721) #15	Smc2 (ENSRNOG00000022325) #16	Rps6 (ENSRNOG00000049025)	Cylc2 (ENSRNOG00000022406) #21	Ppp3r2 (ENSRNOG00000065066)	Grin3a (ENSRNOG00000005723) #22	Rnf20 (ENSRNOG00000006087) #23	Pgap4 (ENSRNOG00000006800) #24	Aldob (ENSRNOG00000006807) #25	Zfp189 (ENSRNOG00000006972) #26	ENSRNOG00000068816 #27	Baat (ENSRNOG00000007395) #29	Acnat1 (ENSRNOG00000065119) ##29	Acnat1 (ENSRNOG00000056688) ##29	Acnat2 (ENSRNOG00000051912) ##29	Plppr1 (ENSRNOG00000007575) #31	Cavin4 (ENSRNOG00000008027) #32	Tmeff1 (ENSRNOG00000008034) #33	Msantd3 (ENSRNOG00000008159) #34	Tex10 (ENSRNOG00000008618) #35	Invs (ENSRNOG00000008632) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1609																Grin3a (ENSNGAG00000024185) #22	Rnf20 (ENSNGAG00000015384) #23	Pgap4 (ENSNGAG00000005598) #24	Aldob (ENSNGAG00000005557) #25	Zfp189 (ENSNGAG00000023741) #26	Mrpl50 (ENSNGAG00000021876) #27	Baat (ENSNGAG00000020940) #29	ENSNGAG00000002603 ##29	Plppr1 (ENSNGAG00000023835) #31	Cavin4 (ENSNGAG00000006831) #32	Tmeff1 (ENSNGAG00000023810) #33	Msantd3 (ENSNGAG00000023802) #34	Tex10 (ENSNGAG00000023893) #35	Invs (ENSNGAG00000019886) #36	Erp44 (ENSNGAG00000021663)	Stx17 (ENSNGAG00000005082)
Lesser Egyptian jerboa	MODERN SPECIES	61	Zfp462 (ENSJJAG00000017478)	Tmem38b (ENSJJAG00000017610)	ENSJJAG00000012167	Tal2 (ENSJJAG00000007872)	Fktn (ENSJJAG00000018854)	Fsd1l (ENSJJAG00000020333)	Slc44a1 (ENSJJAG00000012770)	ENSJJAG00000007650	Abca1 (ENSJJAG00000021124)	ENSJJAG00000011734 #7	ENSJJAG00000014078 #8	ENSJJAG00000014352 #8	Smc2 (ENSJJAG00000024156) #16	ENSJJAG00000009857	ENSJJAG00000023304	Grin3a (ENSJJAG00000023914) #22	Rnf20 (ENSJJAG00000022147) #23	Aldob (ENSJJAG00000017193) #25	Zfp189 (ENSJJAG00000017677) #26	Mrpl50 (ENSJJAG00000015402) #27	Baat (ENSJJAG00000015081) #29	ENSJJAG00000022423 ##29	ENSJJAG00000023201	Plppr1 (ENSJJAG00000014625) #31	ENSJJAG00000018538	Cavin4 (ENSJJAG00000013719) #32	ENSJJAG00000011421	ENSJJAG00000016219 #33	Msantd3 (ENSJJAG00000019733) #34	Tex10 (ENSJJAG00000017725) #35	Invs (ENSJJAG00000020388) #36
Kangaroo rat	MODERN SPECIES	386	Actl7a (ENSDORG00000008612)	Actl7b (ENSDORG00000008610)	ENSDORG00000026534	Rad23b (ENSDORG00000006946)	Zfp462 (ENSDORG00000025368)	Tmem38b (ENSDORG00000011779)	Tal2 (ENSDORG00000012882)	Fktn (ENSDORG00000012880)	Fsd1l (ENSDORG00000012878)	Slc44a1 (ENSDORG00000009386)	Abca1 (ENSDORG00000000957)	ENSDORG00000000955 ##7	ENSDORG00000004991 ##7	Or13c3 (ENSDORG00000008584) #11	Smc2 (ENSDORG00000008581) #16	Grin3a (ENSDORG00000011973) #22	Rnf20 (ENSDORG00000011964) #23	Pgap4 (ENSDORG00000029820) #24	Aldob (ENSDORG00000012832) #25	Zfp189 (ENSDORG00000012830) #26	Mrpl50 (ENSDORG00000012829) #27	Baat (ENSDORG00000012828) #29	Plppr1 (ENSDORG00000012237) #31	Cavin4 (ENSDORG00000015263) #32	Tmeff1 (ENSDORG00000015260) #33	Msantd3 (ENSDORG00000029544) #34	Tex10 (ENSDORG00000016151) #35	Invs (ENSDORG00000016150) #36	Erp44 (ENSDORG00000016149)	ENSDORG00000028611	Nr4a3 (ENSDORG00000011146)
Lagomorpha	ANCESTRAL SPECIES	23													ENSGT00940000162868 #13	ENSGT00530000064170.f #15	ENSGT00550000074857 #16	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #29	ENSGT01010000222336.a.a.b.b ##29	ENSGT00940000158875 #31	ENSGT00950000182910.a.b #32	ENSGT00940000160714 #33	ENSGT00950000182992.a.a #35	ENSGT00940000157688 #36	ENSGT00930000151031	ENSGT01000000214440.A.b	ENSGT00950000183038.a.b.b.a
Rabbit	MODERN SPECIES		ABCA1 (ENSOCUG00000009279)	OR13D1 (ENSOCUG00000021309) #8	ENSOCUG00000036047	OR13C8 (ENSOCUG00000016379) ##12	ENSOCUG00000016376 ##12	OR13F1 (ENSOCUG00000006906) #13	ENSOCUG00000026615 #15	ENSOCUG00000030738	SMC2 (ENSOCUG00000005655) #16	ENSOCUG00000012947	ENSOCUG00000029631	ENSOCUG00000030222	ENSOCUG00000009135	ENSOCUG00000035956	ENSOCUG00000033013	GRIN3A (ENSOCUG00000016738) #22	RNF20 (ENSOCUG00000012019) #23	ALDOB (ENSOCUG00000014944) #25	ZNF189 (ENSOCUG00000014941) #26	MRPL50 (ENSOCUG00000006340) #27	ENSOCUG00000039388 #29	ENSOCUG00000009723 #29	ENSOCUG00000038477	ENSOCUG00000026800 ##29	PLPPR1 (ENSOCUG00000013668) #31	ENSOCUG00000022518	ENSOCUG00000030214	ENSOCUG00000025109	CAVIN4 (ENSOCUG00000022294) #32	ENSOCUG00000006373	TEX10 (ENSOCUG00000004242) #35
Pika	MODERN SPECIES	1447															ENSOPRG00000015639	GRIN3A (ENSOPRG00000015609) #22	RNF20 (ENSOPRG00000015586) #23	PGAP4 (ENSOPRG00000015583) #24	ALDOB (ENSOPRG00000015572) #25	ZNF189 (ENSOPRG00000015563) #26	ENSOPRG00000015557 #27
Tree shrew	MODERN SPECIES	2733																ENSTBEG00000004285 #22	ENSTBEG00000004018 #23