Murinae	ANCESTRAL SPECIES	2	ENSGT00390000014471 #8	ENSGT00940000157979 #9	ENSGT00940000157174 #10	ENSGT00940000154658.b #11	ENSGT00950000183018.b.k.a.a #12	ENSGT00950000183018.b.k.a.b #13	ENSGT01040000240406.A.b.a.b #14	ENSGT01040000240406.A.b.a.a.a.a.b ##14	ENSGT01040000240406.A.b.a.a.a.a.a.a.b #15	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #16	ENSGT00940000162868 #17	ENSGT00530000064170.f #18	ENSGT00550000074857 #19	ENSGT00730000111075.a #20	ENSGT00940000165130 #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #28	ENSGT01010000222336.a.a.b.b #29	ENSGT00940000158875	ENSGT00950000182910.a.b #31	ENSGT00940000160714 #32	ENSGT00390000007901 #33	ENSGT00950000182992.a.a #34	ENSGT00940000157688 #35	ENSGT00930000151031 #36	ENSGT01000000214440.A.b #37
Mus	ANCESTRAL SPECIES	3	ENSGT00940000160867 #7	ENSGT00390000014471 #8	ENSGT00940000157979 #9	ENSGT00940000157174 #10	ENSGT00940000154658.b #11	ENSGT00950000183018.b.k.a.a #12	ENSGT00950000183018.b.k.a.b #13	ENSGT01040000240406.A.b.a.b #14	ENSGT01040000240406.A.b.a.a.a.a.a.a.b #15	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #16	ENSGT00940000162868 #17	ENSGT00530000064170.f #18	ENSGT00550000074857 #19	ENSGT00730000111075.a #20	ENSGT00940000165130 #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #28	ENSGT01010000222336.a.a.b.b #29	ENSGT00940000158875	ENSGT00950000182910.a.b #31	ENSGT00940000160714 #32	ENSGT00390000007901 #33	ENSGT00950000182992.a.a #34	ENSGT00940000157688 #35	ENSGT00930000151031 #36	ENSGT01000000214440.A.b #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000160867 #7	ENSGT00390000014471 #8	ENSGT00940000157979 #9	ENSGT00940000157174 #10	ENSGT00940000154658.b #11	ENSGT00950000183018.b.k.a.a #12	ENSGT00950000183018.b.k.a.b #13	ENSGT01040000240406.A.b.a.b #14	ENSGT01040000240406.A.b.a.a.a.a.a.a.b #15	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #16	ENSGT00940000162868 #17	ENSGT00530000064170.f #18	ENSGT00550000074857 #19	ENSGT00730000111075.a #20	ENSGT00940000165130 #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #28	ENSGT01010000222336.a.a.b.b #29	ENSGT00940000158875	ENSGT00950000182910.a.b #31	ENSGT00940000160714 #32	ENSGT00390000007901 #33	ENSGT00950000182992.a.a #34	ENSGT00940000157688 #35	ENSGT00930000151031 #36	ENSGT01000000214440.A.b #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000160867 #7	ENSGT00390000014471 #8	ENSGT00940000157979 #9	ENSGT00940000157174 #10	ENSGT00940000154658.b #11	ENSGT00950000183018.b.k.a.a #12	ENSGT00950000183018.b.k.a.b #13	ENSGT01040000240406.A.b.a.b #14	ENSGT01040000240406.A.b.a.a.a.a.a.a.b #15	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #16	ENSGT00940000162868 #17	ENSGT00530000064170.f #18	ENSGT00550000074857 #19	ENSGT00730000111075.a #20	ENSGT00940000165130 #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #28	ENSGT01010000222336.a.a.b.b.a #29	ENSGT01010000222336.a.a.b.b.b ##28	ENSGT00940000158875	ENSGT00950000182910.a.b #31	ENSGT00940000160714 #32	ENSGT00390000007901 #33	ENSGT00950000182992.a.a #34	ENSGT00940000157688 #35	ENSGT00930000151031 #36
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000160867 #7	ENSGT00390000014471 #8	ENSGT00940000157979 #9	ENSGT00940000157174 #10	ENSGT00940000154658.b #11	ENSGT00950000183018.b.k.a.a #12	ENSGT00950000183018.b.k.a.b #13	ENSGT01040000240406.A.b.a.b #14	ENSGT01040000240406.A.b.a.a.a.a.a.a.b #15	ENSGT01040000240406.A.b.a.a.a.a.a.b.a.a #16	ENSGT00940000162868 #17	ENSGT00530000064170.f #18	ENSGT00550000074857 #19	ENSGT00730000111075.a #20	ENSGT00940000165130 #21	ENSGT00940000158571 #22	ENSGT00390000002866.b #23	ENSGT00500000045018 #24	ENSGT00950000182987.c.b #25	ENSGT00940000161823 #26	ENSGT00390000004279 #27	ENSGT01010000222336.a.a.b.a #28	ENSGT01010000222336.a.a.b.b.a #29	ENSGT00950000182910.a.b #31	ENSGT00940000160714 #32	ENSGT00390000007901 #33	ENSGT00950000182992.a.a #34	ENSGT00940000157688 #35	ENSGT00930000151031 #36	ENSGT01000000214440.A.b #37	ENSGT00950000183038.a.b.b.a
spretus	MODERN SPECIES	13	Tal2 (MGP_SPRETEiJ_G0026994) #7	Fktn (MGP_SPRETEiJ_G0026993) #8	Fsd1l (MGP_SPRETEiJ_G0026992) #9	Slc44a1 (MGP_SPRETEiJ_G0026991) #10	Abca1 (MGP_SPRETEiJ_G0026990) #11	Nipsnap3b (MGP_SPRETEiJ_G0026989) #12	Nipsnap3a (MGP_SPRETEiJ_G0026988) #13	Or13d1 (MGP_SPRETEiJ_G0026987) #14	Or13c25 (MGP_SPRETEiJ_G0026986) #15	Or13c3 (MGP_SPRETEiJ_G0026985) #16	Or13f5 (MGP_SPRETEiJ_G0026984) #17	Toporsl (MGP_SPRETEiJ_G0026983) #18	Smc2 (MGP_SPRETEiJ_G0026982) #19	MGP_SPRETEiJ_G0026981 #20	Ppp3r2 (MGP_SPRETEiJ_G0026980) #21	Grin3a (MGP_SPRETEiJ_G0026979) #22	Rnf20 (MGP_SPRETEiJ_G0026978) #23	Pgap4 (MGP_SPRETEiJ_G0026977) #24	Aldob (MGP_SPRETEiJ_G0026976) #25	Zfp189 (MGP_SPRETEiJ_G0026975) #26	Mrpl50 (MGP_SPRETEiJ_G0026974) #27	Baat (MGP_SPRETEiJ_G0026973) #28	MGP_SPRETEiJ_G0026972 #29	MGP_SPRETEiJ_G0026971 #30	Cavin4 (MGP_SPRETEiJ_G0026969) #31	Tmeff1 (MGP_SPRETEiJ_G0026968) #32	Msantd3 (MGP_SPRETEiJ_G0026967) #33	Tex10 (MGP_SPRETEiJ_G0026966) #34	Invs (MGP_SPRETEiJ_G0026965) #35	Erp44 (MGP_SPRETEiJ_G0026964) #36	Stx17 (MGP_SPRETEiJ_G0026963) #37
Steppe mouse	MODERN SPECIES	3121															Ppp3r2 (ENSMSIG00000026790) #21	Grin3a (ENSMSIG00000026757) #22	Rnf20 (ENSMSIG00000026724) #23	Pgap4 (ENSMSIG00000026720) #24	Aldob (ENSMSIG00000026708) #25	Zfp189 (ENSMSIG00000026701) #26	Mrpl50 (ENSMSIG00000026695) #27	Baat (ENSMSIG00000026685) #28
Mouse	MODERN SPECIES	13	Tal2 (ENSMUSG00000028417) #7	Fktn (ENSMUSG00000028414) #8	Fsd1l (ENSMUSG00000054752) #9	Slc44a1 (ENSMUSG00000028412) #10	Abca1 (ENSMUSG00000015243) #11	Nipsnap3b (ENSMUSG00000015247) #12	Nipsnap3a (ENSMUSG00000015242) #13	Or13d1 (ENSMUSG00000070983) #14	Or13c25 (ENSMUSG00000051593) #15	Or13c3 (ENSMUSG00000049648) #16	Or13f5 (ENSMUSG00000089717) #17	Toporsl (ENSMUSG00000028314) #18	Smc2 (ENSMUSG00000028312) #19	Cylc2 (ENSMUSG00000039555) #20	Ppp3r2 (ENSMUSG00000028310) #21	Grin3a (ENSMUSG00000039579) #22	Rnf20 (ENSMUSG00000028309) #23	Pgap4 (ENSMUSG00000039611) #24	Aldob (ENSMUSG00000028307) #25	Zfp189 (ENSMUSG00000039634) #26	Mrpl50 (ENSMUSG00000044018) #27	Baat (ENSMUSG00000039653) #28	Acnat1 (ENSMUSG00000070985) #29	Acnat2 (ENSMUSG00000060317) ##28	Plppr1 (ENSMUSG00000063446)	Cavin4 (ENSMUSG00000028348) #31	Tmeff1 (ENSMUSG00000028347) #32	Msantd3 (ENSMUSG00000039693) #33	Tex10 (ENSMUSG00000028345) #34	Invs (ENSMUSG00000028344) #35	Erp44 (ENSMUSG00000028343) #36
Ryukyu mouse	MODERN SPECIES	13	Tal2 (MGP_CAROLIEiJ_G0026031) #7	Fktn (MGP_CAROLIEiJ_G0026030) #8	Fsd1l (MGP_CAROLIEiJ_G0026029) #9	Slc44a1 (MGP_CAROLIEiJ_G0026028) #10	Abca1 (MGP_CAROLIEiJ_G0026027) #11	Nipsnap3b (MGP_CAROLIEiJ_G0026026) #12	Nipsnap3a (MGP_CAROLIEiJ_G0026025) #13	Or13d1 (MGP_CAROLIEiJ_G0026024) #14	Or13c25 (MGP_CAROLIEiJ_G0026023) #15	Or13c3 (MGP_CAROLIEiJ_G0026022) #16	Or13f5 (MGP_CAROLIEiJ_G0026021) #17	Toporsl (MGP_CAROLIEiJ_G0026020) #18	Smc2 (MGP_CAROLIEiJ_G0026019) #19	MGP_CAROLIEiJ_G0026018 #20	Ppp3r2 (MGP_CAROLIEiJ_G0026017) #21	Grin3a (MGP_CAROLIEiJ_G0026016) #22	Rnf20 (MGP_CAROLIEiJ_G0026015) #23	Pgap4 (MGP_CAROLIEiJ_G0026014) #24	Aldob (MGP_CAROLIEiJ_G0026013) #25	Zfp189 (MGP_CAROLIEiJ_G0026012) #26	Mrpl50 (MGP_CAROLIEiJ_G0026011) #27	MGP_CAROLIEiJ_G0026010 #28	MGP_CAROLIEiJ_G0026009 #29	MGP_CAROLIEiJ_G0026008 #29	Plppr1 (MGP_CAROLIEiJ_G0026007)	Cavin4 (MGP_CAROLIEiJ_G0026006) #31	Tmeff1 (MGP_CAROLIEiJ_G0026005) #32	Msantd3 (MGP_CAROLIEiJ_G0026004) #33	Tex10 (MGP_CAROLIEiJ_G0026003) #34	Invs (MGP_CAROLIEiJ_G0026002) #35	Erp44 (MGP_CAROLIEiJ_G0026001) #36
Shrew mouse	MODERN SPECIES	19	Tal2 (MGP_PahariEiJ_G0028367) #7	Fktn (MGP_PahariEiJ_G0028366) #8	Fsd1l (MGP_PahariEiJ_G0028365) #9	Slc44a1 (MGP_PahariEiJ_G0028364) #10	Abca1 (MGP_PahariEiJ_G0028363) #11	Nipsnap3b (MGP_PahariEiJ_G0028362) #12	Nipsnap3a (MGP_PahariEiJ_G0028361) #13	Or13d1 (MGP_PahariEiJ_G0028360) #14	Or13c25 (MGP_PahariEiJ_G0028359) #15	Or13c3 (MGP_PahariEiJ_G0028358) #16	Or13f5 (MGP_PahariEiJ_G0028357) #17	Toporsl (MGP_PahariEiJ_G0028356) #18	Smc2 (MGP_PahariEiJ_G0028355) #19	MGP_PahariEiJ_G0028354 #20	Ppp3r2 (MGP_PahariEiJ_G0028353) #21	Grin3a (MGP_PahariEiJ_G0028352) #22	Rnf20 (MGP_PahariEiJ_G0028351) #23	Pgap4 (MGP_PahariEiJ_G0028350) #24	Aldob (MGP_PahariEiJ_G0028349) #25	Zfp189 (MGP_PahariEiJ_G0028348) #26	Mrpl50 (MGP_PahariEiJ_G0028347) #27	Baat (MGP_PahariEiJ_G0028346) #28	MGP_PahariEiJ_G0028345 #29	MGP_PahariEiJ_G0028344 #29	Plppr1 (MGP_PahariEiJ_G0028343)	Cavin4 (MGP_PahariEiJ_G0028342) #31	Tmeff1 (MGP_PahariEiJ_G0028341) #32	Msantd3 (MGP_PahariEiJ_G0028340) #33	Tex10 (MGP_PahariEiJ_G0028339) #34	Invs (MGP_PahariEiJ_G0028338) #35	Erp44 (MGP_PahariEiJ_G0028337) #36
Rat	MODERN SPECIES	15	Or13c25 (ENSRNOG00000052071) #15	Or13c3 (ENSRNOG00000070860) #16	LOC120103150 (ENSRNOG00000067730) #16	Or13c3f (ENSRNOG00000063372) #16	Or13c3b (ENSRNOG00000071075) #16	Or13c3g (ENSRNOG00000068215) #16	Or13c3c (ENSRNOG00000069301) #16	Or13c3 (ENSRNOG00000064661) #16	LOC500460 (ENSRNOG00000005666) #17	Or13f5 (ENSRNOG00000049788) #17	Toporsl (ENSRNOG00000005721) #18	Smc2 (ENSRNOG00000022325) #19	Rps6 (ENSRNOG00000049025)	Cylc2 (ENSRNOG00000022406) #20	Ppp3r2 (ENSRNOG00000065066) #21	Grin3a (ENSRNOG00000005723) #22	Rnf20 (ENSRNOG00000006087) #23	Pgap4 (ENSRNOG00000006800) #24	Aldob (ENSRNOG00000006807) #25	Zfp189 (ENSRNOG00000006972) #26	ENSRNOG00000068816 #27	Baat (ENSRNOG00000007395) #28	Acnat1 (ENSRNOG00000065119) #29	Acnat1 (ENSRNOG00000056688) #29	Acnat2 (ENSRNOG00000051912) #29	Plppr1 (ENSRNOG00000007575)	Cavin4 (ENSRNOG00000008027) #31	Tmeff1 (ENSRNOG00000008034) #32	Msantd3 (ENSRNOG00000008159) #33	Tex10 (ENSRNOG00000008618) #34	Invs (ENSRNOG00000008632) #35