Chordata	ANCESTRAL SPECIES																	ENSGT00940000159563 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000159563 #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000159563 #22
Euteleostomi	ANCESTRAL SPECIES	152	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000155317.a.a	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT01030000234549.a.a.a.b	ENSGT01030000234549.a.a.a.a.a.a	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000161383	ENSGT00940000166196	ENSGT00940000159128	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT01030000234637.b.c #37	ENSGT00940000159855
Sarcopterygii	ANCESTRAL SPECIES	277									ENSGT01030000234549.a.a.a.b	ENSGT01030000234549.a.a.a.a.a.a	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000161383	ENSGT00940000166196	ENSGT00940000159128	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT01030000234637.b.c #37	ENSGT00940000159855
Tetrapoda	ANCESTRAL SPECIES	434																ENSGT00940000159563 #22	ENSGT00990000203541.b
Amniota	ANCESTRAL SPECIES	40	ENSGT00940000164196	ENSGT00940000165056	ENSGT00940000162821	ENSGT00890000139436.A.b	ENSGT00390000013859	ENSGT00940000161807	ENSGT00390000003809	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000163880	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b
Mammalia	ANCESTRAL SPECIES	46	ENSGT00940000153629.a.b #36	ENSGT00940000158528 #35	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000161233 #9	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153634.a #15	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00940000155317.a.a	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352	ENSGT00390000006665.b	ENSGT00940000164289.a
Theria	ANCESTRAL SPECIES	50	ENSGT00940000158528 #35	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000162057 #28	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22
Eutheria	ANCESTRAL SPECIES	36														ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Glires	ANCESTRAL SPECIES	10	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Rodentia	ANCESTRAL SPECIES	10	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Sciuridae	ANCESTRAL SPECIES	28	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Marmotini	ANCESTRAL SPECIES	81	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901.c #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Alpin marmot	MODERN SPECIES	120	ENSMMMG00000012670 #7	ENSMMMG00000012648 #8	SLC38A5 (ENSMMMG00000012638) #9	FTSJ1 (ENSMMMG00000012579) #10	PORCN (ENSMMMG00000012383) #11	EBP (ENSMMMG00000012370) #12	TBC1D25 (ENSMMMG00000012349) #13	RBM3 (ENSMMMG00000012319) #14	WDR13 (ENSMMMG00000012299) #15	WAS (ENSMMMG00000012285) #16	SUV39H1 (ENSMMMG00000012267) #17	ENSMMMG00000012261 #18	ENSMMMG00000012256 #19	GLOD5 (ENSMMMG00000012244) #20	GATA1 (ENSMMMG00000012237) #21	HDAC6 (ENSMMMG00000012161) #22	ENSMMMG00000012156 #23	PCSK1N (ENSMMMG00000012151) #24	TIMM17B (ENSMMMG00000012146) #25	PQBP1 (ENSMMMG00000012121) #26	OTUD5 (ENSMMMG00000012061) #27	KCND1 (ENSMMMG00000012055) #28	GRIPAP1 (ENSMMMG00000011943) #29	TFE3 (ENSMMMG00000011726) #30	ENSMMMG00000011713 #31	WDR45 (ENSMMMG00000011555) #32	GPKOW (ENSMMMG00000011535) #33	MAGIX (ENSMMMG00000011527) #34	PLP2 (ENSMMMG00000011522) #35	PRICKLE3 (ENSMMMG00000011502) #36	SYP (ENSMMMG00000011496) #37
Marmotini_b	ANCESTRAL SPECIES	120	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901.c #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Squirrel	MODERN SPECIES	321	ZNF182 (ENSSTOG00000020030)	ENSSTOG00000006249	ENSSTOG00000034288 #7	ENSSTOG00000015375 #8	SLC38A5 (ENSSTOG00000001034) #9	FTSJ1 (ENSSTOG00000027717) #10	PORCN (ENSSTOG00000001047) #11	EBP (ENSSTOG00000001055) #12	TBC1D25 (ENSSTOG00000026006) #13	ENSSTOG00000027493 #14	WDR13 (ENSSTOG00000014866) #15	WAS (ENSSTOG00000028043) #16	SUV39H1 (ENSSTOG00000015328) #17	GLOD5 (ENSSTOG00000014150) #20	GATA1 (ENSSTOG00000026993) #21	HDAC6 (ENSSTOG00000014156) #22	PCSK1N (ENSSTOG00000025546) #24	ERAS (ENSSTOG00000028430) #23	TIMM17B (ENSSTOG00000014173) #25	PQBP1 (ENSSTOG00000034920) #26	SLC35A2 (ENSSTOG00000014179)	PIM2 (ENSSTOG00000014191)	OTUD5 (ENSSTOG00000014202) #27	KCND1 (ENSSTOG00000019883) #28	GRIPAP1 (ENSSTOG00000014221) #29	TFE3 (ENSSTOG00000014237) #30	CCDC120 (ENSSTOG00000020841)	PRAF2 (ENSSTOG00000009679) #31	WDR45 (ENSSTOG00000009683) #32	ENSSTOG00000010517	GPKOW (ENSSTOG00000014593) #33
Arctic ground squirrel	MODERN SPECIES	341		ZNF182 (ENSUPAG00010002470)	ENSUPAG00010002478	ENSUPAG00010002488 #7	SLC38A5 (ENSUPAG00010002495) #9	FTSJ1 (ENSUPAG00010002545) #10	PORCN (ENSUPAG00010002577) #11	EBP (ENSUPAG00010002710) #12	TBC1D25 (ENSUPAG00010002723) #13	WDR13 (ENSUPAG00010002757) #15	WAS (ENSUPAG00010002779) #16	SUV39H1 (ENSUPAG00010002798) #17	ENSUPAG00010002821 #18	GLOD5 (ENSUPAG00010002824) #20	GATA1 (ENSUPAG00010002837) #21	HDAC6 (ENSUPAG00010002848) #22	ERAS (ENSUPAG00010002926) #23	PCSK1N (ENSUPAG00010002932) #24	TIMM17B (ENSUPAG00010002940) #25	PQBP1 (ENSUPAG00010002947) #26	SLC35A2 (ENSUPAG00010002977)	PIM2 (ENSUPAG00010002998)	OTUD5 (ENSUPAG00010003005) #27	KCND1 (ENSUPAG00010003047) #28	GRIPAP1 (ENSUPAG00010003056) #29	ENSUPAG00010003193 #30	CCDC120 (ENSUPAG00010003364)	PRAF2 (ENSUPAG00010003375) #31	WDR45 (ENSUPAG00010003384) #32	ENSUPAG00010003688	GPKOW (ENSUPAG00010003718) #33
Eurasian red squirrel	MODERN SPECIES	156	ZNF182 (ENSSVLG00005010624)	ENSSVLG00005010573	ENSSVLG00005010552 #7	ENSSVLG00005010511	ENSSVLG00005010403 #8	FTSJ1 (ENSSVLG00005010314) #10	PORCN (ENSSVLG00005021517) #11	EBP (ENSSVLG00005021464) #12	TBC1D25 (ENSSVLG00005021446) #13	RBM3 (ENSSVLG00005021391) #14	WDR13 (ENSSVLG00005021358) #15	WAS (ENSSVLG00005021256) #16	SUV39H1 (ENSSVLG00005021209) #17	GLOD5 (ENSSVLG00005021145) #20	GATA1 (ENSSVLG00005021013) #21	HDAC6 (ENSSVLG00005020953) #22	ERAS (ENSSVLG00005020927) #23	PCSK1N (ENSSVLG00005020895) #24	TIMM17B (ENSSVLG00005020828) #25	PQBP1 (ENSSVLG00005020775) #26	SLC35A2 (ENSSVLG00005020649)	PIM2 (ENSSVLG00005020572)	OTUD5 (ENSSVLG00005020359) #27	KCND1 (ENSSVLG00005020301) #28	GRIPAP1 (ENSSVLG00005020144) #29	TFE3 (ENSSVLG00005020065) #30	CCDC120 (ENSSVLG00005019933)	PRAF2 (ENSSVLG00005019896) #31	ENSSVLG00005019742 #32	GPKOW (ENSSVLG00005019537) #33	MAGIX (ENSSVLG00005019436) #34
Hystricomorpha	ANCESTRAL SPECIES	11	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a.ab #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154.k #33	ENSGT00940000162529 #34	ENSGT00940000158528 #35
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000043694 #8	ENSHGLG00000002944 #9	FTSJ1 (ENSHGLG00000003132) #10	PORCN (ENSHGLG00000001865) #11	EBP (ENSHGLG00000003626) #12	ENSHGLG00000043943	TBC1D25 (ENSHGLG00000005178) #13	ENSHGLG00000042246 ##14	WDR13 (ENSHGLG00000013774) #15	ENSHGLG00000037346	ENSHGLG00000019572 #16	SUV39H1 (ENSHGLG00000007605) #17	ENSHGLG00000008268	GLOD5 (ENSHGLG00000035331) #20	GATA1 (ENSHGLG00000009775) #21	HDAC6 (ENSHGLG00000010523) #22	PCSK1N (ENSHGLG00000002975) #24	ENSHGLG00000020012	TIMM17B (ENSHGLG00000040054) #25	PQBP1 (ENSHGLG00000001252) #26	SLC35A2 (ENSHGLG00000001312)	PIM2 (ENSHGLG00000001519)	ENSHGLG00000001569 #27	KCND1 (ENSHGLG00000001895) #28	GRIPAP1 (ENSHGLG00000002058) #29	TFE3 (ENSHGLG00000001383) #30	CCDC120 (ENSHGLG00000001767)	PRAF2 (ENSHGLG00000001998) #31	ENSHGLG00000001929 #32	ENSHGLG00000002746 #33	ENSHGLG00000036929 #34
Hystricomorpha_a	ANCESTRAL SPECIES	56	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a.ab #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154.k #33	ENSGT00940000162529 #34	ENSGT00940000158528 #35
Hystricomorpha_b	ANCESTRAL SPECIES	81	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a.ab #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154.k #33	ENSGT00940000162529 #34	ENSGT00940000158528 #35
Long-tailed chinchilla	MODERN SPECIES	250				SLC38A5 (ENSCLAG00000004049) #9	FTSJ1 (ENSCLAG00000011582) #10	PORCN (ENSCLAG00000015764) #11	EBP (ENSCLAG00000002404) #12	TBC1D25 (ENSCLAG00000002644) #13	RBM3 (ENSCLAG00000002908) #14	WDR13 (ENSCLAG00000003526) #15	ENSCLAG00000003016	WAS (ENSCLAG00000003232) #16	SUV39H1 (ENSCLAG00000004044) #17	GLOD5 (ENSCLAG00000002227) #20	GATA1 (ENSCLAG00000002473) #21	HDAC6 (ENSCLAG00000002563) #22	PCSK1N (ENSCLAG00000003392) #24	TIMM17B (ENSCLAG00000003552) #25	PQBP1 (ENSCLAG00000004380) #26	SLC35A2 (ENSCLAG00000004591)	PIM2 (ENSCLAG00000005773)	OTUD5 (ENSCLAG00000006102) #27	KCND1 (ENSCLAG00000002203) #28	GRIPAP1 (ENSCLAG00000002364) #29	ENSCLAG00000017539	TFE3 (ENSCLAG00000002396) #30	CCDC120 (ENSCLAG00000003931)	PRAF2 (ENSCLAG00000004889) #31	WDR45 (ENSCLAG00000005420) #32	ENSCLAG00000002220 #33	MAGIX (ENSCLAG00000002281) #34
Guinea pig	MODERN SPECIES	132	ZNF182 (ENSCPOG00000031427)	ENSCPOG00000032054	ENSCPOG00000030434 #7	ENSCPOG00000026336	ENSCPOG00000035952	FTSJ1 (ENSCPOG00000030576) #10	PORCN (ENSCPOG00000003541) #11	EBP (ENSCPOG00000014151) #12	TBC1D25 (ENSCPOG00000003548) #13	RBM3 (ENSCPOG00000003553) #14	WDR13 (ENSCPOG00000005101) #15	WAS (ENSCPOG00000023506) #16	SUV39H1 (ENSCPOG00000013555) #17	GLOD5 (ENSCPOG00000003997) #20	GATA1 (ENSCPOG00000007573) #21	HDAC6 (ENSCPOG00000008955) #22	PCSK1N (ENSCPOG00000007567) #24	TIMM17B (ENSCPOG00000008768) #25	PQBP1 (ENSCPOG00000032410) #26	SLC35A2 (ENSCPOG00000020236)	PIM2 (ENSCPOG00000006111)	OTUD5 (ENSCPOG00000027082) #27	KCND1 (ENSCPOG00000013271) #28	GRIPAP1 (ENSCPOG00000013274) #29	TFE3 (ENSCPOG00000012410) #30	CCDC120 (ENSCPOG00000012416)	PRAF2 (ENSCPOG00000030120) #31	WDR45 (ENSCPOG00000012419) #32	GPKOW (ENSCPOG00000013270) #33	PLP2 (ENSCPOG00000022812) #35	PRICKLE3 (ENSCPOG00000026750) #36
Rodentia_B	ANCESTRAL SPECIES	31	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Muroidea	ANCESTRAL SPECIES	30	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00390000012484.c #8	ENSGT00390000012484.d #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a	ENSGT00940000166424	ENSGT00390000012484.d #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a	ENSGT00940000166424	ENSGT00390000012484.d #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Cricetinae	ANCESTRAL SPECIES	17	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a	ENSGT00940000166424	ENSGT00390000012484.d #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Chinese hamster chok1gshd	MODERN SPECIES	175	B630019K06Rik (ENSCGRG00001021404)	ENSCGRG00001021892 #8	ENSCGRG00001018882	Slc38a5 (ENSCGRG00001016687) #9	Ftsj1 (ENSCGRG00001023654) #10	Porcn (ENSCGRG00001021670) #11	Ebp (ENSCGRG00001001031) #12	Tbc1d25 (ENSCGRG00001018227) #13	Rbm3 (ENSCGRG00001018909) #14	Wdr13 (ENSCGRG00001001328) #15	Was (ENSCGRG00001012275) #16	Suv39h1 (ENSCGRG00001023557) #17	Glod5 (ENSCGRG00001014309) #20	ENSCGRG00001009581	Gata1 (ENSCGRG00001017719) #21	Hdac6 (ENSCGRG00001011507) #22	ENSCGRG00001001303 #23	Pcsk1n (ENSCGRG00001013577) #24	Timm17b (ENSCGRG00001010270) #25	Pqbp1 (ENSCGRG00001001371) #26	Slc35a2 (ENSCGRG00001000798)	Pim2 (ENSCGRG00001010240)	Otud5 (ENSCGRG00001016496) #27	Kcnd1 (ENSCGRG00001004134) #28	Gripap1 (ENSCGRG00001010183) #29	Tfe3 (ENSCGRG00001000716) #30	Ccdc120 (ENSCGRG00001020835)	Praf2 (ENSCGRG00001017176) #31	Wdr45 (ENSCGRG00001012955) #32	Gpkow (ENSCGRG00001016210) #33	Magix (ENSCGRG00001015068) #34
Golden Hamster	MODERN SPECIES	799					ENSMAUG00000017912	Slc38a5 (ENSMAUG00000000379) #9	Porcn (ENSMAUG00000004437) #11	ENSMAUG00000015656 #12	Tbc1d25 (ENSMAUG00000004232) #13	ENSMAUG00000016488 #14	Wdr13 (ENSMAUG00000009779) #15	Was (ENSMAUG00000000519) #16	Suv39h1 (ENSMAUG00000011289) #17	Glod5 (ENSMAUG00000008099) #20	ENSMAUG00000020294 #21	Hdac6 (ENSMAUG00000022133) #22	Eras (ENSMAUG00000003962) #23	Pcsk1n (ENSMAUG00000015797) #24	ENSMAUG00000016716 #25	ENSMAUG00000013093 #26	Slc35a2 (ENSMAUG00000015557)	Pim2 (ENSMAUG00000009222)	Otud5 (ENSMAUG00000015273) #27	Kcnd1 (ENSMAUG00000008332) #28	Gripap1 (ENSMAUG00000009161) #29	Tfe3 (ENSMAUG00000002865) #30	Ccdc120 (ENSMAUG00000000888)	Wdr45 (ENSMAUG00000011036) #32	Magix (ENSMAUG00000011901) #34	ENSMAUG00000019174 #35	Prickle3 (ENSMAUG00000014616) #36
Cricetidae_B	ANCESTRAL SPECIES	45	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a	ENSGT00940000166424	ENSGT00390000012484.d #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Northern American deer mouse	MODERN SPECIES	475	ENSPEMG00000026731	Dipk2b (ENSPEMG00000026275)	Kdm6a (ENSPEMG00000011007)	ENSPEMG00000028355	Slc38a5 (ENSPEMG00000012763) #9	ENSPEMG00000015698 #10	Porcn (ENSPEMG00000018381) #11	Ebp (ENSPEMG00000019215) #12	Tbc1d25 (ENSPEMG00000000481) #13	Rbm3 (ENSPEMG00000012411) #14	Wdr13 (ENSPEMG00000030841) #15	Was (ENSPEMG00000017673) #16	Suv39h1 (ENSPEMG00000012820) #17	Glod5 (ENSPEMG00000014471) #20	Gata1 (ENSPEMG00000010138) #21	Hdac6 (ENSPEMG00000002814) #22	Eras (ENSPEMG00000018814) #23	Pcsk1n (ENSPEMG00000017215) #24	Timm17b (ENSPEMG00000000361) #25	Pqbp1 (ENSPEMG00000015122) #26	Slc35a2 (ENSPEMG00000011729)	Pim2 (ENSPEMG00000010225)	Otud5 (ENSPEMG00000025054) #27	Kcnd1 (ENSPEMG00000003794) #28	Gripap1 (ENSPEMG00000010836) #29	Tfe3 (ENSPEMG00000013183) #30	Ccdc120 (ENSPEMG00000027723)	Praf2 (ENSPEMG00000029377) #31	Wdr45 (ENSPEMG00000015281) #32	Gpkow (ENSPEMG00000009966) #33	Magix (ENSPEMG00000025490) #34
Prairie vole	MODERN SPECIES	1	Xk (ENSMOCG00000021048)	Lancl3 (ENSMOCG00000018888)	ENSMOCG00000015166 #8	Slc38a5 (ENSMOCG00000015897) #9	ENSMOCG00000000507 #10	ENSMOCG00000008118	Porcn (ENSMOCG00000012499) #11	Ebp (ENSMOCG00000010008) #12	Tbc1d25 (ENSMOCG00000006324) #13	Rbm3 (ENSMOCG00000001511) #14	Wdr13 (ENSMOCG00000000752) #15	Was (ENSMOCG00000022215) #16	Suv39h1 (ENSMOCG00000013532) #17	Glod5 (ENSMOCG00000018812) #20	Gata1 (ENSMOCG00000018101) #21	Hdac6 (ENSMOCG00000022461) #22	Eras (ENSMOCG00000017489) #23	Pcsk1n (ENSMOCG00000016403) #24	Timm17b (ENSMOCG00000022137) #25	Pqbp1 (ENSMOCG00000020123) #26	Slc35a2 (ENSMOCG00000015110)	Pim2 (ENSMOCG00000005351)	Otud5 (ENSMOCG00000011416) #27	ENSMOCG00000018971	Kcnd1 (ENSMOCG00000002342) #28	Gripap1 (ENSMOCG00000007615) #29	Tfe3 (ENSMOCG00000013907) #30	Ccdc120 (ENSMOCG00000008950)	Wdr45 (ENSMOCG00000014028) #32	ENSMOCG00000004994	Gpkow (ENSMOCG00000019251) #33
Murinae	ANCESTRAL SPECIES	33	ENSGT00940000163515.j	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00390000012484.d #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Mus	ANCESTRAL SPECIES	9	ENSGT00530000063186.a	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00390000012484.d #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000169466	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00390000012484.d #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Mus_B	ANCESTRAL SPECIES	14	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00390000012484.d.e.a.b #8	ENSGT00390000012484.d.e.a.a.a.a.a.a.a.a.a #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Mus_C	ANCESTRAL SPECIES	27	ENSGT00530000063186.a	ENSGT00940000169466	ENSGT00950000182841.b.a.a.a.i.a.a	ENSGT00940000166424	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
spretus	MODERN SPECIES	19	4930402K13Rik (MGP_SPRETEiJ_G0034072)	MGP_SPRETEiJ_G0034071	MGP_SPRETEiJ_G0034070	B630019K06Rik (MGP_SPRETEiJ_G0034069)	Slc38a5 (MGP_SPRETEiJ_G0034068) #9	Ftsj1 (MGP_SPRETEiJ_G0034067) #10	Porcn (MGP_SPRETEiJ_G0034066) #11	Ebp (MGP_SPRETEiJ_G0034065) #12	Tbc1d25 (MGP_SPRETEiJ_G0034064) #13	Rbm3 (MGP_SPRETEiJ_G0034063) #14	Wdr13 (MGP_SPRETEiJ_G0034062) #15	Was (MGP_SPRETEiJ_G0034061) #16	Suv39h1 (MGP_SPRETEiJ_G0034060) #17	Glod5 (MGP_SPRETEiJ_G0034059) #20	Gata1 (MGP_SPRETEiJ_G0034058) #21	Hdac6 (MGP_SPRETEiJ_G0034057) #22	Eras (MGP_SPRETEiJ_G0034056) #23	Pcsk1n (MGP_SPRETEiJ_G0034055) #24	MGP_SPRETEiJ_G0034054	MGP_SPRETEiJ_G0034053	Timm17b (MGP_SPRETEiJ_G0034052) #25	Pqbp1 (MGP_SPRETEiJ_G0034051) #26	MGP_SPRETEiJ_G0034050	Pim2 (MGP_SPRETEiJ_G0034049)	Otud5 (MGP_SPRETEiJ_G0034048) #27	Kcnd1 (MGP_SPRETEiJ_G0034047) #28	Gripap1 (MGP_SPRETEiJ_G0034046) #29	Tfe3 (MGP_SPRETEiJ_G0034045) #30	Ccdc120 (MGP_SPRETEiJ_G0034044)	Praf2 (MGP_SPRETEiJ_G0034043) #31	Wdr45 (MGP_SPRETEiJ_G0034042) #32
Steppe mouse	MODERN SPECIES	1466																ENSMSIG00000016722 #22	Eras (ENSMSIG00000019694) #23	Pcsk1n (ENSMSIG00000019698) #24
Mouse	MODERN SPECIES	37	Ssxb2 (ENSMUSG00000023165) #8	Ssxb1 (ENSMUSG00000079705) #8	Ssxb9 (ENSMUSG00000068218) #8	Ssxb10 (ENSMUSG00000068219) #8	Slc38a5 (ENSMUSG00000031170) #9	Ftsj1 (ENSMUSG00000031171) #10	Porcn (ENSMUSG00000031169) #11	Ebp (ENSMUSG00000031168) #12	Tbc1d25 (ENSMUSG00000039201) #13	Rbm3 (ENSMUSG00000031167) #14	Wdr13 (ENSMUSG00000031166) #15	Was (ENSMUSG00000031165) #16	Suv39h1 (ENSMUSG00000039231) #17	Glod5 (ENSMUSG00000031163) #20	Gata1 (ENSMUSG00000031162) #21	Hdac6 (ENSMUSG00000031161) #22	Eras (ENSMUSG00000031160) #23	Pcsk1n (ENSMUSG00000039278) #24	Timm17b (ENSMUSG00000031158) #25	Pqbp1 (ENSMUSG00000031157) #26	Slc35a2 (ENSMUSG00000031156)	Pim2 (ENSMUSG00000031155)	Otud5 (ENSMUSG00000031154) #27	Kcnd1 (ENSMUSG00000009731) #28	Gripap1 (ENSMUSG00000031153) #29	Tfe3 (ENSMUSG00000000134) #30	Ccdc120 (ENSMUSG00000031150)	Praf2 (ENSMUSG00000031149) #31	Gm45208 (ENSMUSG00000109493)	Wdr45 (ENSMUSG00000039382) #32	Gpkow (ENSMUSG00000031148) #33
Ryukyu mouse	MODERN SPECIES	19	MGP_CAROLIEiJ_G0032923	Lancl3 (MGP_CAROLIEiJ_G0032922)	4930402K13Rik (MGP_CAROLIEiJ_G0032921)	B630019K06Rik (MGP_CAROLIEiJ_G0032920)	Slc38a5 (MGP_CAROLIEiJ_G0032919) #9	Ftsj1 (MGP_CAROLIEiJ_G0032918) #10	Porcn (MGP_CAROLIEiJ_G0032917) #11	Ebp (MGP_CAROLIEiJ_G0032916) #12	Tbc1d25 (MGP_CAROLIEiJ_G0032915) #13	MGP_CAROLIEiJ_G0032914 #14	Wdr13 (MGP_CAROLIEiJ_G0032913) #15	Was (MGP_CAROLIEiJ_G0032912) #16	Suv39h1 (MGP_CAROLIEiJ_G0032911) #17	Glod5 (MGP_CAROLIEiJ_G0032910) #20	Gata1 (MGP_CAROLIEiJ_G0032909) #21	Hdac6 (MGP_CAROLIEiJ_G0032908) #22	Eras (MGP_CAROLIEiJ_G0032907) #23	Pcsk1n (MGP_CAROLIEiJ_G0032906) #24	MGP_CAROLIEiJ_G0032905	Timm17b (MGP_CAROLIEiJ_G0032904) #25	Pqbp1 (MGP_CAROLIEiJ_G0032903) #26	Slc35a2 (MGP_CAROLIEiJ_G0032902)	Pim2 (MGP_CAROLIEiJ_G0032901)	Otud5 (MGP_CAROLIEiJ_G0032900) #27	Kcnd1 (MGP_CAROLIEiJ_G0032899) #28	Gripap1 (MGP_CAROLIEiJ_G0032898) #29	Tfe3 (MGP_CAROLIEiJ_G0032897) #30	Ccdc120 (MGP_CAROLIEiJ_G0032896)	Praf2 (MGP_CAROLIEiJ_G0032895) #31	Wdr45 (MGP_CAROLIEiJ_G0032894) #32	Gpkow (MGP_CAROLIEiJ_G0032893) #33
Shrew mouse	MODERN SPECIES	23	Cybb (MGP_PahariEiJ_G0031472)	MGP_PahariEiJ_G0031471	Lancl3 (MGP_PahariEiJ_G0031470)	B630019K06Rik (MGP_PahariEiJ_G0031469)	Slc38a5 (MGP_PahariEiJ_G0031468) #9	Ftsj1 (MGP_PahariEiJ_G0031467) #10	Porcn (MGP_PahariEiJ_G0031466) #11	Ebp (MGP_PahariEiJ_G0031465) #12	Tbc1d25 (MGP_PahariEiJ_G0031464) #13	Rbm3 (MGP_PahariEiJ_G0031463) #14	Wdr13 (MGP_PahariEiJ_G0031462) #15	Was (MGP_PahariEiJ_G0031461) #16	Suv39h1 (MGP_PahariEiJ_G0031460) #17	Glod5 (MGP_PahariEiJ_G0031459) #20	Gata1 (MGP_PahariEiJ_G0031458) #21	Hdac6 (MGP_PahariEiJ_G0031457) #22	Eras (MGP_PahariEiJ_G0031456) #23	Pcsk1n (MGP_PahariEiJ_G0031455) #24	MGP_PahariEiJ_G0031453	Pqbp1 (MGP_PahariEiJ_G0031451) #26	Slc35a2 (MGP_PahariEiJ_G0031450)	Pim2 (MGP_PahariEiJ_G0031449)	Otud5 (MGP_PahariEiJ_G0031448) #27	Kcnd1 (MGP_PahariEiJ_G0031447) #28	Gripap1 (MGP_PahariEiJ_G0031446) #29	Tfe3 (MGP_PahariEiJ_G0031445) #30	Ccdc120 (MGP_PahariEiJ_G0031444)	Praf2 (MGP_PahariEiJ_G0031443) #31	Wdr45 (MGP_PahariEiJ_G0031442) #32	Gpkow (MGP_PahariEiJ_G0031441) #33	Magix (MGP_PahariEiJ_G0031440) #34
Rat	MODERN SPECIES	46	ENSRNOG00000063832	RGD1560784 (ENSRNOG00000032522)	Ssx1 (ENSRNOG00000027850) #8	Slc38a5 (ENSRNOG00000027767) #9	Ftsj1 (ENSRNOG00000004776) #10	Porcn (ENSRNOG00000004819) #11	Ebp (ENSRNOG00000004903) #12	Tbc1d25 (ENSRNOG00000005303) #13	Rbm3 (ENSRNOG00000005387) #14	Wdr13 (ENSRNOG00000039587) #15	Was (ENSRNOG00000031058) #16	Suv39h1 (ENSRNOG00000039576) #17	Glod5 (ENSRNOG00000039571) #20	ENSRNOG00000064215	Gata1 (ENSRNOG00000047663) #21	Hdac6 (ENSRNOG00000048738) #22	Eras (ENSRNOG00000042470) #23	Pcsk1n (ENSRNOG00000046021) #24	Timm17b (ENSRNOG00000063664) #25	Pqbp1 (ENSRNOG00000007766) #26	Slc35a2 (ENSRNOG00000024801)	Pim2 (ENSRNOG00000008177)	Otud5 (ENSRNOG00000008764) #27	Kcnd1 (ENSRNOG00000039544) #28	Gripap1 (ENSRNOG00000009071) #29	Tfe3 (ENSRNOG00000009605) #30	Ccdc120 (ENSRNOG00000009687)	Praf2 (ENSRNOG00000057147) #31	Wdr45 (ENSRNOG00000009749) #32	Gpkow (ENSRNOG00000022939) #33	Magix (ENSRNOG00000010092) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	1197	Zfp300 (ENSNGAG00000017614) #7	ENSNGAG00000018992 #8	ENSNGAG00000018629 #10	Porcn (ENSNGAG00000013300) #11	Ebp (ENSNGAG00000011873) #12	Tbc1d25 (ENSNGAG00000015501) #13	Rbm3 (ENSNGAG00000012951) ##14	Wdr13 (ENSNGAG00000020114) #15	Was (ENSNGAG00000021049) #16	Suv39h1 (ENSNGAG00000006669) #17	ENSNGAG00000009725	Glod5 (ENSNGAG00000012845) #20	ENSNGAG00000001174	Gata1 (ENSNGAG00000006537) #21	ENSNGAG00000011503	Hdac6 (ENSNGAG00000012074) #22	Eras (ENSNGAG00000014397) #23	Pcsk1n (ENSNGAG00000014688) #24	Timm17b (ENSNGAG00000016630) #25	ENSNGAG00000019854 #26	Slc35a2 (ENSNGAG00000020201)	Pim2 (ENSNGAG00000001210)	Otud5 (ENSNGAG00000020154) #27	Kcnd1 (ENSNGAG00000013998) #28	Gripap1 (ENSNGAG00000000137) #29	Tfe3 (ENSNGAG00000011920) #30	Ccdc120 (ENSNGAG00000017506)	Praf2 (ENSNGAG00000008257) #31	Wdr45 (ENSNGAG00000012403) #32	Gpkow (ENSNGAG00000005382) #33	Magix (ENSNGAG00000013836) #34
Lesser Egyptian jerboa	MODERN SPECIES	182														ENSJJAG00000009599	Gata1 (ENSJJAG00000008859) #21	Hdac6 (ENSJJAG00000018265) #22	Eras (ENSJJAG00000017194) #23	Pcsk1n (ENSJJAG00000000165) #24	Timm17b (ENSJJAG00000019902) #25	ENSJJAG00000019393 #26	Slc35a2 (ENSJJAG00000017259)	ENSJJAG00000017188	ENSJJAG00000015261 #27	Kcnd1 (ENSJJAG00000011860) #28	Gripap1 (ENSJJAG00000021070) #29	ENSJJAG00000017110 #30	Ccdc120 (ENSJJAG00000020809)	Praf2 (ENSJJAG00000020655) #31	Wdr45 (ENSJJAG00000014284) #32	Gpkow (ENSJJAG00000013397) #33	Magix (ENSJJAG00000013085) #34
Lagomorpha	ANCESTRAL SPECIES	43	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34	ENSGT00980000200212
Rabbit	MODERN SPECIES	1401	LYZE (ENSOCUG00000002990)	ENSOCUG00000038971	ENSOCUG00000007996 #8	SLC38A5 (ENSOCUG00000008001) #9	ENSOCUG00000008009 #10	PORCN (ENSOCUG00000015293) #11	EBP (ENSOCUG00000015316) #12	TBC1D25 (ENSOCUG00000009251) #13	ENSOCUG00000002271 ##14	ENSOCUG00000000559	WDR13 (ENSOCUG00000014470) #15	WAS (ENSOCUG00000015393) #16	SUV39H1 (ENSOCUG00000003807) #17	GLOD5 (ENSOCUG00000008902) #20	GATA1 (ENSOCUG00000025597) #21	HDAC6 (ENSOCUG00000010141) #22	PCSK1N (ENSOCUG00000009021) #24	TIMM17B (ENSOCUG00000027418) #25	PQBP1 (ENSOCUG00000011703) #26	SLC35A2 (ENSOCUG00000011709)	ENSOCUG00000015757	OTUD5 (ENSOCUG00000015767) #27	KCND1 (ENSOCUG00000015777) #28	GRIPAP1 (ENSOCUG00000015788) #29	TFE3 (ENSOCUG00000015807) #30	CCDC120 (ENSOCUG00000004644)	PRAF2 (ENSOCUG00000035406) #31	WDR45 (ENSOCUG00000023611) #32	GPKOW (ENSOCUG00000010422) #33	MAGIX (ENSOCUG00000026212) #34	ENSOCUG00000001393
Pika	MODERN SPECIES	7392																ENSOPRG00000005549 #22
Tree shrew	MODERN SPECIES	5855																ENSTBEG00000011061 #22	PCSK1N (ENSTBEG00000011240) #24
Primates	ANCESTRAL SPECIES	19	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.b.ab.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Haplorrhini	ANCESTRAL SPECIES	18	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.b.ab.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	28	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484.g #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701.b	ENSGT00940000159563.m #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C.i #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154.g #33	ENSGT00940000162529 #34
Cebidae	ANCESTRAL SPECIES	18	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484.g #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701.b	ENSGT00940000159563.m #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C.i #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154.g #33	ENSGT00940000162529 #34
Cebidae_a	ANCESTRAL SPECIES	64	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484.g #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563.m #22	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C.i #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00940000155657 #32	ENSGT00390000015154.g #33	ENSGT00940000162529 #34	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36
Capuchin	MODERN SPECIES	30	ENSCCAG00000024462	ANKUB1 (ENSCCAG00000032570)	ENSCCAG00000020698 #8	SLC38A5 (ENSCCAG00000032976) #9	FTSJ1 (ENSCCAG00000027731) #10	PORCN (ENSCCAG00000035069) #11	EBP (ENSCCAG00000027079) #12	TBC1D25 (ENSCCAG00000033507) #13	RBM3 (ENSCCAG00000038019) #14	WDR13 (ENSCCAG00000038091) #15	WAS (ENSCCAG00000036792) #16	ENSCCAG00000001345	SUV39H1 (ENSCCAG00000004739) #17	GLOD5 (ENSCCAG00000033598) #20	GATA1 (ENSCCAG00000032671) #21	ENSCCAG00000037521 #22	PCSK1N (ENSCCAG00000032016) #24	TIMM17B (ENSCCAG00000030275) #25	PQBP1 (ENSCCAG00000034951) #26	SLC35A2 (ENSCCAG00000025257)	PIM2 (ENSCCAG00000024329)	OTUD5 (ENSCCAG00000033387) #27	KCND1 (ENSCCAG00000037150) #28	GRIPAP1 (ENSCCAG00000003776) #29
Bolivian squirrel monkey	MODERN SPECIES	157	ZNF182 (ENSSBOG00000020007)	ENSSBOG00000027716	ZNF630 (ENSSBOG00000026832)	ENSSBOG00000031724 #8	SLC38A5 (ENSSBOG00000028771) #9	FTSJ1 (ENSSBOG00000028146) #10	PORCN (ENSSBOG00000023287) #11	EBP (ENSSBOG00000032355) #12	TBC1D25 (ENSSBOG00000032876) #13	ENSSBOG00000032527	WDR13 (ENSSBOG00000035999) #15	WAS (ENSSBOG00000032308) #16	SUV39H1 (ENSSBOG00000003145) #17	GLOD5 (ENSSBOG00000035107) #20	GATA1 (ENSSBOG00000020278) #21	ENSSBOG00000023772 #22	PCSK1N (ENSSBOG00000035004) #24	TIMM17B (ENSSBOG00000029876) #25	PQBP1 (ENSSBOG00000024905) #26	SLC35A2 (ENSSBOG00000025776)	PIM2 (ENSSBOG00000013515)	OTUD5 (ENSSBOG00000006541) #27	KCND1 (ENSSBOG00000026039) #28	GRIPAP1 (ENSSBOG00000036112) #29	TFE3 (ENSSBOG00000035668) #30	CCDC120 (ENSSBOG00000017789)	WDR45 (ENSSBOG00000020972) #32	ENSSBOG00000032042 #33	MAGIX (ENSSBOG00000034505) #34	PLP2 (ENSSBOG00000027809) #35	PRICKLE3 (ENSSBOG00000024198) #36
Marmoset	MODERN SPECIES	78	ENSCJAG00000081387	ENSCJAG00000014776 #8	SLC38A5 (ENSCJAG00000014797) #9	FTSJ1 (ENSCJAG00000002256) #10	PORCN (ENSCJAG00000002259) #11	EBP (ENSCJAG00000002295) #12	TBC1D25 (ENSCJAG00000002300) #13	RBM3 (ENSCJAG00000047341) #14	WDR13 (ENSCJAG00000002328) #15	ENSCJAG00000073077	WAS (ENSCJAG00000002365) #16	SUV39H1 (ENSCJAG00000002376) #17	GLOD5 (ENSCJAG00000042238) #20	GATA1 (ENSCJAG00000040521) #21	ENSCJAG00000077383	HDAC6 (ENSCJAG00000002395) #22	ERAS (ENSCJAG00000040987) #23	PCSK1N (ENSCJAG00000047969) #24	TIMM17B (ENSCJAG00000002426) #25	PQBP1 (ENSCJAG00000002452) #26	SLC35A2 (ENSCJAG00000002479)	OTUD5 (ENSCJAG00000002507) #27	KCND1 (ENSCJAG00000002523) #28	GRIPAP1 (ENSCJAG00000002531) #29	ENSCJAG00000084243	CCDC120 (ENSCJAG00000002605)	PRAF2 (ENSCJAG00000078035) #31	WDR45 (ENSCJAG00000002633) #32	GPKOW (ENSCJAG00000002656) #33	MAGIX (ENSCJAG00000002679) #34	PLP2 (ENSCJAG00000002681) #35
Mas night monkey	MODERN SPECIES	1206					SLC38A5 (ENSANAG00000019713) #9	ENSANAG00000030571 #10	PORCN (ENSANAG00000035750) #11	EBP (ENSANAG00000037612) #12	TBC1D25 (ENSANAG00000024436) #13	ENSANAG00000028883 #14	WDR13 (ENSANAG00000029097) #15	WAS (ENSANAG00000007111) #16	SUV39H1 (ENSANAG00000022001) #17	GLOD5 (ENSANAG00000022210) #20	GATA1 (ENSANAG00000032139) #21	HDAC6 (ENSANAG00000021233) #22	PCSK1N (ENSANAG00000031176) #24	TIMM17B (ENSANAG00000030275) #25	ENSANAG00000027490 #26	SLC35A2 (ENSANAG00000037954)	PIM2 (ENSANAG00000025623)	OTUD5 (ENSANAG00000033729) #27	KCND1 (ENSANAG00000027103) #28	GRIPAP1 (ENSANAG00000036795) #29	TFE3 (ENSANAG00000037525) #30	CCDC120 (ENSANAG00000021812)	WDR45 (ENSANAG00000036620) #32	ENSANAG00000030473 #33	MAGIX (ENSANAG00000038043) #34	PLP2 (ENSANAG00000029245) #35	PRICKLE3 (ENSANAG00000024859) #36
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000159563.n #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000159563.n #22
Cebidae_a	ANCESTRAL SPECIES	34	ENSGT01100000263819	ENSGT00530000063669.a	ENSGT00390000006192	ENSGT00530000063255.B	ENSGT00850000132319.a.a.b	ENSGT00390000000470	ENSGT00390000005639.a.a	ENSGT00390000010628	ENSGT00530000063586.b	ENSGT00390000017291.a	ENSGT00390000017291.b	ENSGT00390000006172	ENSGT00940000155482	ENSGT00940000159588	ENSGT00940000160357	ENSGT00940000159563.n #22	ENSGT00940000156198.c.a	ENSGT00940000161843	ENSGT00940000161833	ENSGT00940000160449	ENSGT00940000161846	ENSGT00940000160595.b	ENSGT00390000009416	ENSGT00940000159192	ENSGT00940000159350	ENSGT00390000012901	ENSGT00390000003477	ENSGT00940000158750	ENSGT00390000000483.b	ENSGT00390000014853	ENSGT00940000161623
Capuchin	MODERN SPECIES	249							TAPT1 (ENSCCAG00000035151)	PROM1 (ENSCCAG00000018735)	ENSCCAG00000035419	CD38 (ENSCCAG00000024354)	BST1 (ENSCCAG00000037795)	FBXL5 (ENSCCAG00000021277)	CC2D2A (ENSCCAG00000024722)	C1QTNF7 (ENSCCAG00000027766)	CPEB2 (ENSCCAG00000032725)	ENSCCAG00000012158 #22	BOD1L1 (ENSCCAG00000021069)	NKX3-2 (ENSCCAG00000018506)	ENSCCAG00000029140	ENSCCAG00000034602	ENSCCAG00000037919
Bolivian squirrel monkey	MODERN SPECIES	108																ENSSBOG00000020114 #22	BOD1L1 (ENSSBOG00000028092)	NKX3-2 (ENSSBOG00000031285)	RAB28 (ENSSBOG00000023429)	HS3ST1 (ENSSBOG00000010089)	CLNK (ENSSBOG00000032245)	ZNF518B (ENSSBOG00000017630)	WDR1 (ENSSBOG00000019807)	SLC2A9 (ENSSBOG00000022402)	OTOP1 (ENSSBOG00000014731)	TMEM128 (ENSSBOG00000000856)	LYAR (ENSSBOG00000023039)	ZBTB49 (ENSSBOG00000023351)	NSG1 (ENSSBOG00000031831)	STX18 (ENSSBOG00000031642)	ENSSBOG00000024913
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00390000012484.f.a.b.a #8	ENSGT00390000012484.f.a.b.b.b #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Hominoidea	ANCESTRAL SPECIES	16	ENSGT00940000162205	ENSGT00390000012484.f.a.b.b.b #8	ENSGT00630000089895.x	ENSGT00390000012484.f.a.b.b.a.b.b #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000162205	ENSGT00390000012484.f.a.b.b.b #8	ENSGT00630000089895.x	ENSGT00390000012484.f.a.b.b.a.b.b.a #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00390000012484.f.a.b.b.b #8	ENSGT00630000089895.x	ENSGT00390000012484.f.a.b.b.a.b.b.a #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT01030000234626.D.l	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00390000012484.f.a.b.b.a.a.a.b.a #8	ENSGT00390000012484.f.a.b.b.a.b.b.a #8	ENSGT00630000089895.x	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063.a #17	ENSGT00940000153941.a.b #20	ENSGT01030000234626.D.l	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Pan	ANCESTRAL SPECIES	6	ENSGT00390000012484.f.a.b.b.a.a.a.b.a #8	ENSGT00390000012484.f.a.b.b.a.b.b.a #8	ENSGT00630000089895.x	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063.a #17	ENSGT00940000153941.a.b #20	ENSGT01030000234626.D.l	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34	ENSGT00940000158528 #35
Bonobo	MODERN SPECIES	369	ENSPPAG00000035462 #8	SSX3 (ENSPPAG00000043286) #8	ENSPPAG00000030049	SLC38A5 (ENSPPAG00000037376) #9	FTSJ1 (ENSPPAG00000028540) #10	PORCN (ENSPPAG00000032866) #11	ENSPPAG00000041670 #12	TBC1D25 (ENSPPAG00000038374) #13	RBM3 (ENSPPAG00000034179) #14	WDR13 (ENSPPAG00000030357) #15	WAS (ENSPPAG00000032465) #16	SUV39H1 (ENSPPAG00000030054) #17	GLOD5 (ENSPPAG00000042162) #20	ENSPPAG00000035139	GATA1 (ENSPPAG00000034872) #21	HDAC6 (ENSPPAG00000033426) #22	ERAS (ENSPPAG00000026637) #23	PCSK1N (ENSPPAG00000034344) #24	ENSPPAG00000036547 #25	PQBP1 (ENSPPAG00000038832) #26	SLC35A2 (ENSPPAG00000026694)	PIM2 (ENSPPAG00000041108)	ENSPPAG00000043025 #27	KCND1 (ENSPPAG00000035010) #28	GRIPAP1 (ENSPPAG00000040230) #29	TFE3 (ENSPPAG00000028832) #30	CCDC120 (ENSPPAG00000026576)	WDR45 (ENSPPAG00000042027) #32	GPKOW (ENSPPAG00000040116) #33	MAGIX (ENSPPAG00000037324) #34	PLP2 (ENSPPAG00000040820) #35
Human	MODERN SPECIES	1827	SSX3 (ENSG00000165584) #8	SSX4 (ENSG00000268009) #8	SSX4B (ENSG00000269791) #8	SLC38A5 (ENSG00000017483) #9	FTSJ1 (ENSG00000068438) #10	PORCN (ENSG00000102312) #11	EBP (ENSG00000147155) #12	ENSG00000286268	TBC1D25 (ENSG00000068354) #13	RBM3 (ENSG00000102317) #14	WDR13 (ENSG00000101940) #15	WAS (ENSG00000015285) #16	SUV39H1 (ENSG00000101945) #17	GLOD5 (ENSG00000171433) #20	GATA1 (ENSG00000102145) #21	HDAC6 (ENSG00000094631) #22	ERAS (ENSG00000187682) #23	PCSK1N (ENSG00000102109) #24	PQBP1 (ENSG00000102103) #26	TIMM17B (ENSG00000126768) #25	SLC35A2 (ENSG00000102100)	PIM2 (ENSG00000102096)	OTUD5 (ENSG00000068308) #27	KCND1 (ENSG00000102057) #28	GRIPAP1 (ENSG00000068400) #29	TFE3 (ENSG00000068323) #30	CCDC120 (ENSG00000147144)	PRAF2 (ENSG00000243279) #31	ENSG00000288053	WDR45 (ENSG00000196998) #32	GPKOW (ENSG00000068394) #33
Gorilla	MODERN SPECIES	523	ENSGGOG00000026107 #8	ENSGGOG00000042305	SLC38A5 (ENSGGOG00000013314) #9	FTSJ1 (ENSGGOG00000028552) #10	PORCN (ENSGGOG00000004796) #11	ENSGGOG00000043092 #12	TBC1D25 (ENSGGOG00000039233) #13	RBM3 (ENSGGOG00000005864) #14	WDR13 (ENSGGOG00000005870) #15	ENSGGOG00000004622 #16	WAS (ENSGGOG00000039779) #16	SUV39H1 (ENSGGOG00000027774) #17	GLOD5 (ENSGGOG00000007330) #20	ENSGGOG00000040202	GATA1 (ENSGGOG00000023559) #21	HDAC6 (ENSGGOG00000004525) #22	ERAS (ENSGGOG00000004536) #23	PCSK1N (ENSGGOG00000004538) #24	ENSGGOG00000011427 #25	PQBP1 (ENSGGOG00000011431) #26	SLC35A2 (ENSGGOG00000011437)	PIM2 (ENSGGOG00000011440)	ENSGGOG00000002727 #28	GRIPAP1 (ENSGGOG00000023074) #29	TFE3 (ENSGGOG00000014023) #30	CCDC120 (ENSGGOG00000000586)	WDR45 (ENSGGOG00000000589) #32	GPKOW (ENSGGOG00000013685) #33	MAGIX (ENSGGOG00000009033) #34	PLP2 (ENSGGOG00000024000) #35	PRICKLE3 (ENSGGOG00000039081) #36
Orangutan	MODERN SPECIES	242	ENSPPYG00000030665 #8	ENSPPYG00000037125 #8	ENSPPYG00000035792 #8	ENSPPYG00000037009 #8	SLC38A5 (ENSPPYG00000020308) #9	FTSJ1 (ENSPPYG00000020309) #10	PORCN (ENSPPYG00000020310) #11	EBP (ENSPPYG00000020311) #12	TBC1D25 (ENSPPYG00000038579) #13	RBM3 (ENSPPYG00000020314)	WDR13 (ENSPPYG00000020315) #15	WAS (ENSPPYG00000020316) #16	SUV39H1 (ENSPPYG00000020317) #17	GLOD5 (ENSPPYG00000020318) #20	GATA1 (ENSPPYG00000020319) #21	HDAC6 (ENSPPYG00000020320) #22	ERAS (ENSPPYG00000020321) #23	PCSK1N (ENSPPYG00000020322) #24	ENSPPYG00000020323 #25	PQBP1 (ENSPPYG00000035767) #26	SLC35A2 (ENSPPYG00000041299)	PIM2 (ENSPPYG00000020326)	OTUD5 (ENSPPYG00000020327) #27	KCND1 (ENSPPYG00000020328) #28	GRIPAP1 (ENSPPYG00000020330) #29	TFE3 (ENSPPYG00000029376) #30	CCDC120 (ENSPPYG00000020331)	PRAF2 (ENSPPYG00000020332) #31	WDR45 (ENSPPYG00000020333) #32	GPKOW (ENSPPYG00000020334) #33	MAGIX (ENSPPYG00000020335) #34
Cercopithecidae	ANCESTRAL SPECIES	27	ENSGT00390000012484.f.a.b.b.b.a #8	ENSGT00630000089895.x	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Rhinopithecus	ANCESTRAL SPECIES	311	ENSGT00390000012484.f.a.b.b.a.b.b #8	ENSGT00390000012484.f.a.b.b.b.a #8	ENSGT00630000089895.x	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00410000028756	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24
Black snub-nosed monkey	MODERN SPECIES	1769												WAS (ENSRBIG00000044530) #16	SUV39H1 (ENSRBIG00000038736) #17	GLOD5 (ENSRBIG00000041226) #20	GATA1 (ENSRBIG00000026904) #21	HDAC6 (ENSRBIG00000029142) #22	ERAS (ENSRBIG00000026594) #23	PCSK1N (ENSRBIG00000033130) #24
Golden snub-nosed monkey	MODERN SPECIES	929		ENSRROG00000005525 #8	ENSRROG00000041177 #8	ENSRROG00000030999	SLC38A5 (ENSRROG00000040266) #9	FTSJ1 (ENSRROG00000029757) #10	PORCN (ENSRROG00000034839) #11	EBP (ENSRROG00000044857) #12	TBC1D25 (ENSRROG00000028357) #13	RBM3 (ENSRROG00000034767) #14	WDR13 (ENSRROG00000041479) #15	WAS (ENSRROG00000041272) #16	SUV39H1 (ENSRROG00000031547) #17	GLOD5 (ENSRROG00000043719) #20	GATA1 (ENSRROG00000035063) #21	HDAC6 (ENSRROG00000043682) #22	ERAS (ENSRROG00000037990) #23	PCSK1N (ENSRROG00000042291) #24
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT00630000089895.x	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Vervet Monkey	MODERN SPECIES	203	SSX1 (ENSCSAG00000013387) #8	ENSCSAG00000013354 #8	ENSCSAG00000013341 #8	ENSCSAG00000013311 #8	SLC38A5 (ENSCSAG00000013284) #9	FTSJ1 (ENSCSAG00000013278) #10	PORCN (ENSCSAG00000013270) #11	EBP (ENSCSAG00000013263) #12	TBC1D25 (ENSCSAG00000013246) #13	RBM3 (ENSCSAG00000013242) #14	WDR13 (ENSCSAG00000013235) #15	WAS (ENSCSAG00000013227) #16	SUV39H1 (ENSCSAG00000013221) #17	GLOD5 (ENSCSAG00000013213) #20	GATA1 (ENSCSAG00000013203) #21	HDAC6 (ENSCSAG00000013197) #22	ERAS (ENSCSAG00000019564) #23	PCSK1N (ENSCSAG00000013181) #24	TIMM17B (ENSCSAG00000013171) #25	PQBP1 (ENSCSAG00000013159) #26	SLC35A2 (ENSCSAG00000013155)	PIM2 (ENSCSAG00000013149)	OTUD5 (ENSCSAG00000013145) #27	KCND1 (ENSCSAG00000013138) #28	GRIPAP1 (ENSCSAG00000013107) #29	TFE3 (ENSCSAG00000013021) #30	CCDC120 (ENSCSAG00000013004)	PRAF2 (ENSCSAG00000012978) #31	WDR45 (ENSCSAG00000012964) #32	GPKOW (ENSCSAG00000012926) #33	MAGIX (ENSCSAG00000012916) #34
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a.l #14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.a.a.k.b #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Cercopithecinae_b	ANCESTRAL SPECIES	44	ENSGT00390000012484.f.a.b.b.b.b #8	ENSGT00390000012484.f.a.b.a #8	ENSGT00390000012484.f.a.b.b.a.b.b #8	ENSGT00390000012484.f.a.b.b.b.a #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a.l #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Olive baboon	MODERN SPECIES	792	ENSPANG00000016327 #8	ENSPANG00000045359 #8	ENSPANG00000031810 #8	ENSPANG00000048115 #8	SLC38A5 (ENSPANG00000002527) #9	FTSJ1 (ENSPANG00000010102) #10	PORCN (ENSPANG00000003150) #11	EBP (ENSPANG00000012369) #12	TBC1D25 (ENSPANG00000010723) #13	RBM3 (ENSPANG00000034727) #14	WDR13 (ENSPANG00000012952) #15	WAS (ENSPANG00000005276) #16	SUV39H1 (ENSPANG00000004841) #17	GLOD5 (ENSPANG00000035690) #20	GATA1 (ENSPANG00000017368) #21	HDAC6 (ENSPANG00000007274) #22	ERAS (ENSPANG00000018181) #23	PCSK1N (ENSPANG00000015256) #24	TIMM17B (ENSPANG00000015318) #25	PQBP1 (ENSPANG00000013632) #26	SLC35A2 (ENSPANG00000003149)	PIM2 (ENSPANG00000009952)	OTUD5 (ENSPANG00000023327) #27	KCND1 (ENSPANG00000003598) #28	GRIPAP1 (ENSPANG00000013631) #29	TFE3 (ENSPANG00000013676) #30	CCDC120 (ENSPANG00000003148)	PRAF2 (ENSPANG00000040259) #31	WDR45 (ENSPANG00000008540) #32	GPKOW (ENSPANG00000013477) #33	MAGIX (ENSPANG00000012032) #34
Cercopithecinae_d	ANCESTRAL SPECIES	76	ENSGT00390000012484.f.a.b.b.b.b #8	ENSGT00390000012484.f.a.a.a.a #8	ENSGT00390000012484.f.a.b.a #8	ENSGT00390000012484.f.a.b.b.b.a #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a.l #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34	ENSGT00940000158528 #35
Sooty mangabey	MODERN SPECIES	404											ENSCATG00000023593	WAS (ENSCATG00000044972) #16	SUV39H1 (ENSCATG00000036142) #17	GLOD5 (ENSCATG00000037814) #20	GATA1 (ENSCATG00000025362) #21	HDAC6 (ENSCATG00000043307) #22	ERAS (ENSCATG00000015662) #23	PCSK1N (ENSCATG00000036843) #24	TIMM17B (ENSCATG00000035492) #25	PQBP1 (ENSCATG00000044182) #26	SLC35A2 (ENSCATG00000040690)	PIM2 (ENSCATG00000038525)	OTUD5 (ENSCATG00000033103) #27	KCND1 (ENSCATG00000011996) #28	GRIPAP1 (ENSCATG00000024072) #29	TFE3 (ENSCATG00000029548) #30	CCDC120 (ENSCATG00000030130)	WDR45 (ENSCATG00000006794) #32	GPKOW (ENSCATG00000041433) #33	MAGIX (ENSCATG00000031631) #34	PLP2 (ENSCATG00000036523) #35
Drill	MODERN SPECIES	1065	ENSMLEG00000043485 #8	ENSMLEG00000027842 #8	ENSMLEG00000036553 #8	ENSMLEG00000012610 #8	SLC38A5 (ENSMLEG00000029237) #9	FTSJ1 (ENSMLEG00000016789) #10	PORCN (ENSMLEG00000043224) #11	EBP (ENSMLEG00000037407) #12	TBC1D25 (ENSMLEG00000029669) #13	RBM3 (ENSMLEG00000041745) #14	WDR13 (ENSMLEG00000037784) #15	WAS (ENSMLEG00000032594) #16	SUV39H1 (ENSMLEG00000036097) #17	GLOD5 (ENSMLEG00000041222) #20	GATA1 (ENSMLEG00000031222) #21	HDAC6 (ENSMLEG00000036773) #22	ERAS (ENSMLEG00000027363) #23	TIMM17B (ENSMLEG00000039526) #25	PQBP1 (ENSMLEG00000028927) #26	SLC35A2 (ENSMLEG00000038781)	PIM2 (ENSMLEG00000029129)	OTUD5 (ENSMLEG00000041141) #27	KCND1 (ENSMLEG00000043942) #28	GRIPAP1 (ENSMLEG00000043249) #29	TFE3 (ENSMLEG00000037046) #30	ENSMLEG00000021075	CCDC120 (ENSMLEG00000035115)	WDR45 (ENSMLEG00000042347) #32	GPKOW (ENSMLEG00000033293) #33	MAGIX (ENSMLEG00000036554) #34	PLP2 (ENSMLEG00000031572) #35
Macaca	ANCESTRAL SPECIES	13	ENSGT00630000089895.x	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a.l #14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Pig-tailed macaque	MODERN SPECIES	207	ENSMNEG00000025570 #8	ENSMNEG00000043125 #8	ENSMNEG00000037873 #8	ENSMNEG00000031459	SLC38A5 (ENSMNEG00000040455) #9	FTSJ1 (ENSMNEG00000044348) #10	PORCN (ENSMNEG00000031731) #11	EBP (ENSMNEG00000028360) #12	TBC1D25 (ENSMNEG00000044146) #13	RBM3 (ENSMNEG00000042115) #14	WDR13 (ENSMNEG00000033698) #15	WAS (ENSMNEG00000034263) #16	SUV39H1 (ENSMNEG00000013732) #17	GLOD5 (ENSMNEG00000029463) #20	GATA1 (ENSMNEG00000043842) #21	HDAC6 (ENSMNEG00000045060) #22	ERAS (ENSMNEG00000004089) #23	PCSK1N (ENSMNEG00000035990) #24	TIMM17B (ENSMNEG00000038509) #25	PQBP1 (ENSMNEG00000035279) #26	SLC35A2 (ENSMNEG00000033235)	PIM2 (ENSMNEG00000036646)	OTUD5 (ENSMNEG00000042421) #27	KCND1 (ENSMNEG00000044552) #28	GRIPAP1 (ENSMNEG00000028228) #29	TFE3 (ENSMNEG00000034885) #30	CCDC120 (ENSMNEG00000033523)	WDR45 (ENSMNEG00000034464) #32	GPKOW (ENSMNEG00000004803) #33	MAGIX (ENSMNEG00000029713) #34	PLP2 (ENSMNEG00000035489) #35
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00390000012484.f.a.b.a #8	ENSGT00390000012484.f.a.b.b.a.b.b #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00910000145701	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e.e.a #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657.db.a.a #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Crab-eating macaque	MODERN SPECIES	175	ENSMFAG00000061797 #8	ENSMFAG00000044497 #8	SLC38A5 (ENSMFAG00000000065) #9	FTSJ1 (ENSMFAG00000003467) #10	PORCN (ENSMFAG00000035976) #11	EBP (ENSMFAG00000037811) #12	TBC1D25 (ENSMFAG00000045738) #13	ENSMFAG00000049521	ENSMFAG00000003694	WDR13 (ENSMFAG00000038642) #15	WAS (ENSMFAG00000034169) #16	SUV39H1 (ENSMFAG00000042131) #17	GLOD5 (ENSMFAG00000042609) #20	GATA1 (ENSMFAG00000031953) #21	ENSMFAG00000047907	HDAC6 (ENSMFAG00000044074) #22	ERAS (ENSMFAG00000018924) #23	TIMM17B (ENSMFAG00000000862) #25	PQBP1 (ENSMFAG00000029786) #26	SLC35A2 (ENSMFAG00000046212)	PIM2 (ENSMFAG00000032689)	ENSMFAG00000061294	OTUD5 (ENSMFAG00000039347) #27	ENSMFAG00000032065 #28	GRIPAP1 (ENSMFAG00000002305) #29	ENSMFAG00000055468	TFE3 (ENSMFAG00000000673) #30	PRAF2 (ENSMFAG00000059455) #31	WDR45 (ENSMFAG00000032970) #32	GPKOW (ENSMFAG00000035346) #33	MAGIX (ENSMFAG00000035726) #34
Rhesus	MODERN SPECIES	327	ENSMMUG00000041263 #8	ENSMMUG00000010112 #8	ENSMMUG00000046387 #8	ENSMMUG00000056352 #8	ENSMMUG00000058139 #8	SLC38A5 (ENSMMUG00000016975) #9	FTSJ1 (ENSMMUG00000018894) #10	PORCN (ENSMMUG00000018895) #11	TBC1D25 (ENSMMUG00000018335) #13	ENSMMUG00000057508	WDR13 (ENSMMUG00000015396) #15	WAS (ENSMMUG00000019767) #16	SUV39H1 (ENSMMUG00000019768) #17	GLOD5 (ENSMMUG00000007505) #20	GATA1 (ENSMMUG00000016464) #21	HDAC6 (ENSMMUG00000016465) #22	ERAS (ENSMMUG00000016467) #23	PCSK1N (ENSMMUG00000016469) #24	TIMM17B (ENSMMUG00000004547) #25	PQBP1 (ENSMMUG00000004548) #26	SLC35A2 (ENSMMUG00000004553)	PIM2 (ENSMMUG00000053345)	OTUD5 (ENSMMUG00000004558) #27	KCND1 (ENSMMUG00000004559) #28	GRIPAP1 (ENSMMUG00000020059) #29	TFE3 (ENSMMUG00000023494) #30	CCDC120 (ENSMMUG00000010617)	WDR45 (ENSMMUG00000010620) #32	PRAF2 (ENSMMUG00000055688) #31	GPKOW (ENSMMUG00000020557) #33	MAGIX (ENSMMUG00000023021) #34
Tarsier	MODERN SPECIES	5874															GATA1 (ENSTSYG00000003698) #21	HDAC6 (ENSTSYG00000002883) #22	PCSK1N (ENSTSYG00000030484) #24	TIMM17B (ENSTSYG00000010396) #25	PQBP1 (ENSTSYG00000009969) #26	SLC35A2 (ENSTSYG00000010011)	PIM2 (ENSTSYG00000030255)	OTUD5 (ENSTSYG00000026196) #27	KCND1 (ENSTSYG00000028641) #28	GRIPAP1 (ENSTSYG00000006024) #29	TFE3 (ENSTSYG00000010219) #30
Strepsirrhini	ANCESTRAL SPECIES	23	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b.ab.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT01100000263546.d.b.a.a.a.b	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Lemuriformes	ANCESTRAL SPECIES	46	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146.o #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b.ab.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT01100000263546.d.b.a.a.a.b	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34	ENSGT00940000158528 #35
Mouse lemur	MODERN SPECIES	169	ENSMICG00000034553	ENSMICG00000045282 #8	SLC38A5 (ENSMICG00000013083) #9	PORCN (ENSMICG00000013105) #11	EBP (ENSMICG00000037008) #12	TBC1D25 (ENSMICG00000013126) #13	ENSMICG00000030860	ENSMICG00000047440 ##14	WDR13 (ENSMICG00000012548) #15	WAS (ENSMICG00000035528) #16	SUV39H1 (ENSMICG00000014379) #17	BPIFA3 (ENSMICG00000045437)	GLOD5 (ENSMICG00000029182) #20	ENSMICG00000046068	GATA1 (ENSMICG00000032208) #21	HDAC6 (ENSMICG00000005955) #22	PCSK1N (ENSMICG00000030219) #24	ENSMICG00000045125	ENSMICG00000042454	TIMM17B (ENSMICG00000005971) #25	PQBP1 (ENSMICG00000005973) #26	SLC35A2 (ENSMICG00000005976)	PIM2 (ENSMICG00000043000)	OTUD5 (ENSMICG00000005989) #27	KCND1 (ENSMICG00000033913) #28	GRIPAP1 (ENSMICG00000034554) #29	TFE3 (ENSMICG00000009708) #30	CCDC120 (ENSMICG00000001966)	WDR45 (ENSMICG00000030259) #32	ENSMICG00000034048	GPKOW (ENSMICG00000045083) #33
Lemuriformes_a	ANCESTRAL SPECIES	85	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146.o #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b.ab.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT01100000263546.d.b.a.a.a.b	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34	ENSGT00940000158528 #35
Coquerels sifaka	MODERN SPECIES	532	ENSPCOG00000028526	ENSPCOG00000025673	ZNF630 (ENSPCOG00000014197)	SLC38A5 (ENSPCOG00000028146) #9	ENSPCOG00000018822 #10	PORCN (ENSPCOG00000016355) #11	EBP (ENSPCOG00000019080) #12	TBC1D25 (ENSPCOG00000015204) #13	ENSPCOG00000014346 ##14	WDR13 (ENSPCOG00000010396) #15	WAS (ENSPCOG00000028712) #16	SUV39H1 (ENSPCOG00000025042) #17	BPIFA3 (ENSPCOG00000012476)	GLOD5 (ENSPCOG00000012991) #20	GATA1 (ENSPCOG00000021788) #21	HDAC6 (ENSPCOG00000027534) #22	PCSK1N (ENSPCOG00000012912) #24	ENSPCOG00000013555 #25	PQBP1 (ENSPCOG00000013610) #26	SLC35A2 (ENSPCOG00000023683)	PIM2 (ENSPCOG00000016885)	OTUD5 (ENSPCOG00000015759) #27	KCND1 (ENSPCOG00000020985) #28	GRIPAP1 (ENSPCOG00000020199) #29	TFE3 (ENSPCOG00000027417) #30	CCDC120 (ENSPCOG00000014281)	WDR45 (ENSPCOG00000022106) #32	ENSPCOG00000013912	GPKOW (ENSPCOG00000008505) #33	MAGIX (ENSPCOG00000023292) #34	PLP2 (ENSPCOG00000007197) #35
Greater bamboo lemur	MODERN SPECIES	1126													SUV39H1 (ENSPSMG00000017182) #17	GLOD5 (ENSPSMG00000017167) #20	GATA1 (ENSPSMG00000017162) #21	HDAC6 (ENSPSMG00000017124) #22	ERAS (ENSPSMG00000017051) #23	PCSK1N (ENSPSMG00000017040) #24	TIMM17B (ENSPSMG00000017035) #25	ENSPSMG00000017002 #26	SLC35A2 (ENSPSMG00000016957)	PIM2 (ENSPSMG00000016892)	ENSPSMG00000016867 #28	GRIPAP1 (ENSPSMG00000016820) #29	ENSPSMG00000016563	TFE3 (ENSPSMG00000016555) #30	CCDC120 (ENSPSMG00000016545)	WDR45 (ENSPSMG00000016506) #32
Bushbaby	MODERN SPECIES	268	ENSOGAG00000004403	ENSOGAG00000030057	ENSOGAG00000034309 #8	SLC38A5 (ENSOGAG00000026543) #9	ENSOGAG00000016174 #10	PORCN (ENSOGAG00000030340) #11	EBP (ENSOGAG00000016187) #12	TBC1D25 (ENSOGAG00000034911) #13	RBM3 (ENSOGAG00000026654) ##14	WDR13 (ENSOGAG00000016193) #15	WAS (ENSOGAG00000003288) #16	SUV39H1 (ENSOGAG00000033074) #17	BPIFA3 (ENSOGAG00000027244)	GLOD5 (ENSOGAG00000013859) #20	GATA1 (ENSOGAG00000025595) #21	HDAC6 (ENSOGAG00000013860) #22	ERAS (ENSOGAG00000008196) #23	PCSK1N (ENSOGAG00000034785) #24	TIMM17B (ENSOGAG00000009604) #25	PQBP1 (ENSOGAG00000009606) #26	SLC35A2 (ENSOGAG00000009610)	PIM2 (ENSOGAG00000009613)	ENSOGAG00000009614 #27	KCND1 (ENSOGAG00000026877) #28	GRIPAP1 (ENSOGAG00000032089) #29	TFE3 (ENSOGAG00000031330) #30	CCDC120 (ENSOGAG00000029309)	PRAF2 (ENSOGAG00000012183) #31	WDR45 (ENSOGAG00000012184) #32	GPKOW (ENSOGAG00000003644) #33	MAGIX (ENSOGAG00000006325) #34
Laurasiatheria	ANCESTRAL SPECIES	16	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00410000028756	ENSGT00520000061451	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159563 #22
Hedgehog	MODERN SPECIES	249																HDAC6 (ENSEEUG00000002062) #22
Common shrew	MODERN SPECIES	5184																HDAC6 (ENSSARG00000002351) #22
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Suina	ANCESTRAL SPECIES	7	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34	ENSGT00940000158528.y.a #35
Chacoan peccary	MODERN SPECIES	107	ZNF182 (ENSCWAG00000013120)	ENSCWAG00000013071	ZNF630 (ENSCWAG00000013003)	ENSCWAG00000012946 #8	SLC38A5 (ENSCWAG00000012878) #9	FTSJ1 (ENSCWAG00000012698) #10	PORCN (ENSCWAG00000012490) #11	EBP (ENSCWAG00000012439) #12	TBC1D25 (ENSCWAG00000012417) #13	ENSCWAG00000012360 ##14	WDR13 (ENSCWAG00000012281) #15	WAS (ENSCWAG00000012161) #16	SUV39H1 (ENSCWAG00000012092) #17	GLOD5 (ENSCWAG00000012021) #20	GATA1 (ENSCWAG00000011923) #21	HDAC6 (ENSCWAG00000011826) #22	ERAS (ENSCWAG00000011794) #23	PCSK1N (ENSCWAG00000011786) #24	TIMM17B (ENSCWAG00000011732) #25	PQBP1 (ENSCWAG00000011665) #26	SLC35A2 (ENSCWAG00000011361)	PIM2 (ENSCWAG00000011270)	OTUD5 (ENSCWAG00000011041) #27	KCND1 (ENSCWAG00000010930) #28	GRIPAP1 (ENSCWAG00000010204) #29	TFE3 (ENSCWAG00000010121) #30	CCDC120 (ENSCWAG00000009998)	WDR45 (ENSCWAG00000009600) #32	GPKOW (ENSCWAG00000009496) #33	MAGIX (ENSCWAG00000009434) #34	ENSCWAG00000009394 #35
Pig	MODERN SPECIES	300	ZNF182 (ENSSSCG00000012284)	SPACA5 (ENSSSCG00000012285)	ZNF630 (ENSSSCG00000012286)	ENSSSCG00000047914 #8	SLC38A5 (ENSSSCG00000025981) #9	FTSJ1 (ENSSSCG00000025599) #10	PORCN (ENSSSCG00000024793) #11	EBP (ENSSSCG00000032768) #12	TBC1D25 (ENSSSCG00000040599) #13	RBM3 (ENSSSCG00000021591) ##14	WDR13 (ENSSSCG00000023759) #15	WAS (ENSSSCG00000036747) #16	SUV39H1 (ENSSSCG00000032453) #17	GLOD5 (ENSSSCG00000031477) #20	GATA1 (ENSSSCG00000027237) #21	HDAC6 (ENSSSCG00000025545) #22	ERAS (ENSSSCG00000042563) #23	PCSK1N (ENSSSCG00000021328) #24	TIMM17B (ENSSSCG00000022647) #25	PQBP1 (ENSSSCG00000025264) #26	SLC35A2 (ENSSSCG00000024841)	PIM2 (ENSSSCG00000028964)	OTUD5 (ENSSSCG00000021934) #27	KCND1 (ENSSSCG00000028284) #28	GRIPAP1 (ENSSSCG00000021106) #29	TFE3 (ENSSSCG00000012287) #30	CCDC120 (ENSSSCG00000012288)	WDR45 (ENSSSCG00000012290) #32	GPKOW (ENSSSCG00000012291) #33	MAGIX (ENSSSCG00000012295) #34	PLP2 (ENSSSCG00000012294) #35
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Camelidae	ANCESTRAL SPECIES	45	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Arabian camel	MODERN SPECIES	204	ZNF81 (ENSCDRG00005016226)	ZNF182 (ENSCDRG00005016242)	ENSCDRG00005016290	ENSCDRG00005016342 #8	SLC38A5 (ENSCDRG00005016431) #9	FTSJ1 (ENSCDRG00005016527) #10	PORCN (ENSCDRG00005016745) #11	EBP (ENSCDRG00005017019) #12	TBC1D25 (ENSCDRG00005017043) #13	RBM3 (ENSCDRG00005017079) ##14	WDR13 (ENSCDRG00005017129) #15	WAS (ENSCDRG00005017181) #16	SUV39H1 (ENSCDRG00005017272) #17	GLOD5 (ENSCDRG00005017341) #20	GATA1 (ENSCDRG00005017373) #21	HDAC6 (ENSCDRG00005017433) #22	ERAS (ENSCDRG00005017547) #23	PCSK1N (ENSCDRG00005017560) #24	TIMM17B (ENSCDRG00005017597) #25	PQBP1 (ENSCDRG00005017618) #26	SLC35A2 (ENSCDRG00005017693)	PIM2 (ENSCDRG00005017861)	OTUD5 (ENSCDRG00005017909) #27	KCND1 (ENSCDRG00005017937) #28	GRIPAP1 (ENSCDRG00005018016) #29	TFE3 (ENSCDRG00005018293) #30	CCDC120 (ENSCDRG00005018336)	PRAF2 (ENSCDRG00005018493) #31	WDR45 (ENSCDRG00005018532) #32	GPKOW (ENSCDRG00005018640) #33	MAGIX (ENSCDRG00005018665) #34
Alpaca	MODERN SPECIES	3137																ENSVPAG00000009122 #22
Artiodactyla_b	ANCESTRAL SPECIES	24	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Pecora	ANCESTRAL SPECIES	27	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146.db.a #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000006247.e.b	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000011943.a.b
Percora_a	ANCESTRAL SPECIES	22	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146.db.a #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000006247.e.b	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000011943.a.b
Bovidae	ANCESTRAL SPECIES	23	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146.db.a #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000006247.e.b	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000011943.a.b
Caprinae	ANCESTRAL SPECIES	40	ENSGT00940000162205	ENSGT00390000012484.n #8	ENSGT00940000163698	ENSGT00390000012484.m #8	ENSGT00940000161233 #9	ENSGT00730000111146.db.a #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a.n #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000006247.e.b	ENSGT00390000017780.e.s #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000011943.a.b
Goat	MODERN SPECIES	86																HDAC6 (ENSCHIG00000010051) #22	PCSK1N (ENSCHIG00000016734) #24	ENSCHIG00000008449	ENSCHIG00000013967 #25	PQBP1 (ENSCHIG00000022517) #26	SLC35A2 (ENSCHIG00000007124)	PIM2 (ENSCHIG00000010677)	OTUD5 (ENSCHIG00000024079) #27
Rambouillet Sheep	MODERN SPECIES	205	ZNF182 (ENSOARG00020021721)	ENSOARG00020021683	ENSOARG00020021616 #8	ENSOARG00020021587 #8	SLC38A5 (ENSOARG00020021490) #9	FTSJ1 (ENSOARG00020021373) #10	PORCN (ENSOARG00020020147) #11	EBP (ENSOARG00020020086) #12	TBC1D25 (ENSOARG00020020035) #13	RBM3 (ENSOARG00020019997) ##14	WDR13 (ENSOARG00020019947) #15	WAS (ENSOARG00020019858) #16	SUV39H1 (ENSOARG00020019775) #17	GLOD5 (ENSOARG00020019731) #20	GATA1 (ENSOARG00020019687) #21	HDAC6 (ENSOARG00020019522) #22	ERAS (ENSOARG00020019493) #23	PCSK1N (ENSOARG00020019460) #24	ENSOARG00020019438	TIMM17B (ENSOARG00020019398) #25	PQBP1 (ENSOARG00020019308) #26	SLC35A2 (ENSOARG00020018735)	PIM2 (ENSOARG00020018673)	OTUD5 (ENSOARG00020018505) #27	KCND1 (ENSOARG00020018421) #28	GRIPAP1 (ENSOARG00020017638) #29	TFE3 (ENSOARG00020017512) #30	CCDC120 (ENSOARG00020016906)	PRAF2 (ENSOARG00020016835) #31	WDR45 (ENSOARG00020016450) #32	ENSOARG00020016383
Bovinae	ANCESTRAL SPECIES	38	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484.k #8	ENSGT00390000012484.l #8	ENSGT00940000161233 #9	ENSGT00730000111146.db.a #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000006247.e.b	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000011943.a.b
Bos	ANCESTRAL SPECIES	30	ENSGT00940000162205	ENSGT00390000012484.k #8	ENSGT00390000012484.l #8	ENSGT00940000161233 #9	ENSGT00730000111146.db.a #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00950000182891.a.a.b.a.a.a.b.a.a	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000006247.e.b	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000011943.a.b
Bos_b	ANCESTRAL SPECIES	12	ENSGT00390000012484.k #8	ENSGT00390000012484.l #8	ENSGT00940000161233 #9	ENSGT00730000111146.db.a #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00950000182891.a.a.b.a.a.a.b.a.a	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.b ##14	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000006247.e.b	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000011943.a.b
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005008850 #8	ENSBIXG00005000308 #8	SLC38A5 (ENSBIXG00005008903) #9	FTSJ1 (ENSBIXG00005008955) #10	PORCN (ENSBIXG00005009012) #11	EBP (ENSBIXG00005006089) #12	ENSBIXG00005009063	TBC1D25 (ENSBIXG00005009079) #13	ENSBIXG00005009118 ##14	WDR13 (ENSBIXG00005009138) #15	WAS (ENSBIXG00005009177) #16	SUV39H1 (ENSBIXG00005009201) #17	ENSBIXG00005000431	GLOD5 (ENSBIXG00005009242) #20	GATA1 (ENSBIXG00005009261) #21	HDAC6 (ENSBIXG00005000532) #22	ERAS (ENSBIXG00005009662) #23	PCSK1N (ENSBIXG00005009686) #24	ENSBIXG00005007464	TIMM17B (ENSBIXG00005009725) #25	PQBP1 (ENSBIXG00005009781) #26	SLC35A2 (ENSBIXG00005009832)	PIM2 (ENSBIXG00005009846)	OTUD5 (ENSBIXG00005009869) #27	KCND1 (ENSBIXG00005009897) #28	GRIPAP1 (ENSBIXG00005010105) #29	TFE3 (ENSBIXG00005010183) #30	CCDC120 (ENSBIXG00005010246)	WDR45 (ENSBIXG00005010398) #32	ENSBIXG00005000884	GPKOW (ENSBIXG00005007520) #33
Cow	MODERN SPECIES	177	SPACA5 (ENSBTAG00000046069)	ENSBTAG00000054604 #8	SSX5 (ENSBTAG00000048817) #8	SLC38A5 (ENSBTAG00000011854) #9	FTSJ1 (ENSBTAG00000031829) #10	PORCN (ENSBTAG00000009282) #11	EBP (ENSBTAG00000009287) #12	TBC1D25 (ENSBTAG00000009288) #13	ENSBTAG00000051063	RBM3 (ENSBTAG00000025848) ##14	WDR13 (ENSBTAG00000018060) #15	WAS (ENSBTAG00000046555) #16	SUV39H1 (ENSBTAG00000004706) #17	GLOD5 (ENSBTAG00000052110) #20	GATA1 (ENSBTAG00000003184) #21	HDAC6 (ENSBTAG00000013244) #22	ERAS (ENSBTAG00000012954) #23	PCSK1N (ENSBTAG00000013250) #24	ENSBTAG00000049284	TIMM17B (ENSBTAG00000018496) #25	PQBP1 (ENSBTAG00000018498) #26	SLC35A2 (ENSBTAG00000002768)	PIM2 (ENSBTAG00000004597)	OTUD5 (ENSBTAG00000004600) #27	KCND1 (ENSBTAG00000009024) #28	GRIPAP1 (ENSBTAG00000007788) #29	TFE3 (ENSBTAG00000008523) #30	CCDC120 (ENSBTAG00000002561)	PRAF2 (ENSBTAG00000002562) #31	WDR45 (ENSBTAG00000002563) #32	ENSBTAG00000002565
Bos_a	ANCESTRAL SPECIES	26	ENSGT00940000162205	ENSGT00390000012484.k #8	ENSGT00390000012484.l #8	ENSGT00940000161233 #9	ENSGT00730000111146.db.a #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00950000182891.a.a.b.a.a.a.b.a.a	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000006247.e.b	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000011943.a.b
Wild yak	MODERN SPECIES	100			ENSBMUG00000005640	SLC38A5 (ENSBMUG00000005627) #9	FTSJ1 (ENSBMUG00000005590) #10	PORCN (ENSBMUG00000005520) #11	EBP (ENSBMUG00000005432) #12	ENSBMUG00000005424	TBC1D25 (ENSBMUG00000005413) #13	RBM3 (ENSBMUG00000005406) ##14	WDR13 (ENSBMUG00000005394) #15	WAS (ENSBMUG00000005376) #16	SUV39H1 (ENSBMUG00000005366) #17	GLOD5 (ENSBMUG00000005358) #20	GATA1 (ENSBMUG00000005353) #21	HDAC6 (ENSBMUG00000005294) #22	ERAS (ENSBMUG00000005191) #23	ENSBMUG00000005166	TIMM17B (ENSBMUG00000005154) #25	PQBP1 (ENSBMUG00000005136) #26	SLC35A2 (ENSBMUG00000005102)	PIM2 (ENSBMUG00000005005)	OTUD5 (ENSBMUG00000004985) #27	KCND1 (ENSBMUG00000004963) #28	GRIPAP1 (ENSBMUG00000004899) #29	TFE3 (ENSBMUG00000004711) #30	CCDC120 (ENSBMUG00000004689)	WDR45 (ENSBMUG00000004596) #32	ENSBMUG00000004464	GPKOW (ENSBMUG00000004443) #33	MAGIX (ENSBMUG00000004416) #34
Domestic yak	MODERN SPECIES	69	ENSBGRG00000016915	ENSBGRG00000016947 #8	ENSBGRG00000017067 #8	ENSBGRG00000017186	SLC38A5 (ENSBGRG00000017235) #9	FTSJ1 (ENSBGRG00000017760) #10	PORCN (ENSBGRG00000018078) #11	EBP (ENSBGRG00000018809) #12	TBC1D25 (ENSBGRG00000018856) #13	ENSBGRG00000018988	WDR13 (ENSBGRG00000019030) #15	WAS (ENSBGRG00000019207) #16	SUV39H1 (ENSBGRG00000019464) #17	GLOD5 (ENSBGRG00000019638) #20	GATA1 (ENSBGRG00000019786) #21	HDAC6 (ENSBGRG00000019900) #22	ERAS (ENSBGRG00000017973) #23	PCSK1N (ENSBGRG00000017992) #24	ENSBGRG00000018026	TIMM17B (ENSBGRG00000018055) #25	PQBP1 (ENSBGRG00000018132) #26	SLC35A2 (ENSBGRG00000018196)	PIM2 (ENSBGRG00000018477)	OTUD5 (ENSBGRG00000018572) #27	KCND1 (ENSBGRG00000018827) #28	GRIPAP1 (ENSBGRG00000018956) #29	TFE3 (ENSBGRG00000019914) #30	CCDC120 (ENSBGRG00000020146)	PRAF2 (ENSBGRG00000020422) #31	WDR45 (ENSBGRG00000020477) #32	ENSBGRG00000020721
Siberian musk deer	MODERN SPECIES	140	ENSMMSG00000014027	ZNF182 (ENSMMSG00000014060)	ENSMMSG00000014089	ENSMMSG00000014111 #8	SLC38A5 (ENSMMSG00000014145) #9	ENSMMSG00000014231 #10	PORCN (ENSMMSG00000014343) #11	EBP (ENSMMSG00000014479) #12	TBC1D25 (ENSMMSG00000014487) #13	RBM3 (ENSMMSG00000014505) ##14	WDR13 (ENSMMSG00000014527) #15	WAS (ENSMMSG00000014556) #16	SUV39H1 (ENSMMSG00000014578) #17	ENSMMSG00000014613	GATA1 (ENSMMSG00000014634) #21	HDAC6 (ENSMMSG00000014675) #22	ERAS (ENSMMSG00000014709) #23	PCSK1N (ENSMMSG00000014718) #24	ENSMMSG00000014734	ENSMMSG00000014746	ENSMMSG00000014758 #25	PQBP1 (ENSMMSG00000014787) #26	SLC35A2 (ENSMMSG00000014825)	PIM2 (ENSMMSG00000014885)	OTUD5 (ENSMMSG00000014915) #27	KCND1 (ENSMMSG00000014993) #28	GRIPAP1 (ENSMMSG00000015045) #29	TFE3 (ENSMMSG00000015192) #30	CCDC120 (ENSMMSG00000015230)	PRAF2 (ENSMMSG00000015369) #31	WDR45 (ENSMMSG00000015407) #32
Yarkand deer	MODERN SPECIES	1323	ZNF182 (ENSCHYG00000013010)	ENSCHYG00000012978	ENSCHYG00000012946 #8	SLC38A5 (ENSCHYG00000012767) #9	ENSCHYG00000012549 #10	PORCN (ENSCHYG00000012176) #11	EBP (ENSCHYG00000012133) #12	TBC1D25 (ENSCHYG00000012073) #13	RBM3 (ENSCHYG00000011980) ##14	WDR13 (ENSCHYG00000011832) #15	WAS (ENSCHYG00000011572) #16	SUV39H1 (ENSCHYG00000011530) #17	ENSCHYG00000011491	GLOD5 (ENSCHYG00000011409) #20	GATA1 (ENSCHYG00000011351) #21	HDAC6 (ENSCHYG00000011007) #22	ERAS (ENSCHYG00000010970) #23	PCSK1N (ENSCHYG00000010927) #24	ENSCHYG00000010894	TIMM17B (ENSCHYG00000010797) #25	PQBP1 (ENSCHYG00000010724) #26	SLC35A2 (ENSCHYG00000010376)	PIM2 (ENSCHYG00000010311)	OTUD5 (ENSCHYG00000010124) #27	KCND1 (ENSCHYG00000010050) #28	ENSCHYG00000009761 #29	TFE3 (ENSCHYG00000009588) #30	CCDC120 (ENSCHYG00000009246)	PRAF2 (ENSCHYG00000009137) #31	WDR45 (ENSCHYG00000008790) #32	ENSCHYG00000008752
Cetacea	ANCESTRAL SPECIES	21	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963.e #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Odontoceti	ANCESTRAL SPECIES	22	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963.e #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Odontoceti_a	ANCESTRAL SPECIES	20	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963.e #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154.e #33	ENSGT00940000162529 #34
Odontoceti_b	ANCESTRAL SPECIES	22	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963.e #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154.e #33	ENSGT00940000162529 #34
Monodontidae	ANCESTRAL SPECIES	25	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963.e #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154.e #33	ENSGT00940000162529 #34
Narwhal	MODERN SPECIES	309	ZNF182 (ENSMMNG00015011831)	ENSMMNG00015011846	ENSMMNG00015011855	ENSMMNG00015011884 #8	SLC38A5 (ENSMMNG00015011941) #9	FTSJ1 (ENSMMNG00015011978) #10	PORCN (ENSMMNG00015012054) #11	EBP (ENSMMNG00015012106) #12	TBC1D25 (ENSMMNG00015012127) #13	ENSMMNG00015012149 ##14	WDR13 (ENSMMNG00015012173) #15	WAS (ENSMMNG00015012198) #16	SUV39H1 (ENSMMNG00015013434) #17	GLOD5 (ENSMMNG00015013445) #20	GATA1 (ENSMMNG00015013455) #21	HDAC6 (ENSMMNG00015013491) #22	ERAS (ENSMMNG00015013571) #23	PCSK1N (ENSMMNG00015013577) #24	TIMM17B (ENSMMNG00015013591) #25	PQBP1 (ENSMMNG00015013604) #26	SLC35A2 (ENSMMNG00015013653)	PIM2 (ENSMMNG00015013727)	OTUD5 (ENSMMNG00015013743) #27	KCND1 (ENSMMNG00015013766) #28	GRIPAP1 (ENSMMNG00015013812) #29	TFE3 (ENSMMNG00015013885) #30	CCDC120 (ENSMMNG00015013919)	WDR45 (ENSMMNG00015014008) #32	NUDT10 (ENSMMNG00015014068)	MAGIX (ENSMMNG00015014078) #34	PLP2 (ENSMMNG00015014094) #35
Beluga whale	MODERN SPECIES	58	ZNF81 (ENSDLEG00000014408)	ZNF182 (ENSDLEG00000014423)	ENSDLEG00000014443	ENSDLEG00000014456	SLC38A5 (ENSDLEG00000014476) #9	FTSJ1 (ENSDLEG00000014522) #10	PORCN (ENSDLEG00000014587) #11	EBP (ENSDLEG00000014898) #12	TBC1D25 (ENSDLEG00000014913) #13	RBM3 (ENSDLEG00000014932) #14	WDR13 (ENSDLEG00000014950) #15	WAS (ENSDLEG00000014970) #16	SUV39H1 (ENSDLEG00000015013) #17	GLOD5 (ENSDLEG00000015027) #20	GATA1 (ENSDLEG00000015042) #21	HDAC6 (ENSDLEG00000015075) #22	ERAS (ENSDLEG00000015182) #23	PCSK1N (ENSDLEG00000015194) #24	TIMM17B (ENSDLEG00000015207) #25	PQBP1 (ENSDLEG00000015219) #26	SLC35A2 (ENSDLEG00000015242)	PIM2 (ENSDLEG00000015254)	OTUD5 (ENSDLEG00000015262) #27	KCND1 (ENSDLEG00000015277) #28	GRIPAP1 (ENSDLEG00000015299) #29	TFE3 (ENSDLEG00000015379) #30	CCDC120 (ENSDLEG00000015399)	PRAF2 (ENSDLEG00000015413) #31	WDR45 (ENSDLEG00000015427) #32	GPKOW (ENSDLEG00000015449) #33	MAGIX (ENSDLEG00000015472) #34
Vaquita	MODERN SPECIES	34	ENSPSNG00000021166	ENSPSNG00000021187	ENSPSNG00000021205 #8	SLC38A5 (ENSPSNG00000021233) #9	FTSJ1 (ENSPSNG00000021369) #10	PORCN (ENSPSNG00000021437) #11	EBP (ENSPSNG00000021503) #12	TBC1D25 (ENSPSNG00000021530) #13	ENSPSNG00000021553 ##14	WDR13 (ENSPSNG00000021582) #15	ENSPSNG00000021604	WAS (ENSPSNG00000021678) #16	SUV39H1 (ENSPSNG00000021699) #17	GLOD5 (ENSPSNG00000021717) #20	GATA1 (ENSPSNG00000021730) #21	HDAC6 (ENSPSNG00000021767) #22	ERAS (ENSPSNG00000021824) #23	PCSK1N (ENSPSNG00000021831) #24	ENSPSNG00000021876 #25	PQBP1 (ENSPSNG00000021929) #26	PIM2 (ENSPSNG00000021950)	OTUD5 (ENSPSNG00000021991) #27	KCND1 (ENSPSNG00000022071) #28	GRIPAP1 (ENSPSNG00000022119) #29	TFE3 (ENSPSNG00000022162) #30	CCDC120 (ENSPSNG00000022188)	PRAF2 (ENSPSNG00000022219) #31	WDR45 (ENSPSNG00000022244) #32	ENSPSNG00000022259	ENSPSNG00000022263 #33	MAGIX (ENSPSNG00000022275) #34
Dolphin	MODERN SPECIES	3258												ENSTTRG00000004590 #16	SUV39H1 (ENSTTRG00000004638) #17	GLOD5 (ENSTTRG00000004651) #20	GATA1 (ENSTTRG00000004670) #21	HDAC6 (ENSTTRG00000004685) #22	ERAS (ENSTTRG00000004724) #23	PCSK1N (ENSTTRG00000004727) #24	TIMM17B (ENSTTRG00000004732) #25	PQBP1 (ENSTTRG00000004738) #26	SLC35A2 (ENSTTRG00000004744)	PIM2 (ENSTTRG00000004747)	OTUD5 (ENSTTRG00000004758) #27
Sperm whale	MODERN SPECIES	13	ZNF81 (ENSPCTG00005008580)	ZNF182 (ENSPCTG00005008390)	ENSPCTG00005008237	ENSPCTG00005008039 #8	SLC38A5 (ENSPCTG00005007935) #9	FTSJ1 (ENSPCTG00005007848) #10	PORCN (ENSPCTG00005007329) #11	EBP (ENSPCTG00005007244) #12	TBC1D25 (ENSPCTG00005007191) #13	RBM3 (ENSPCTG00005007146) ##14	WDR13 (ENSPCTG00005007072) #15	WAS (ENSPCTG00005007021) #16	SUV39H1 (ENSPCTG00005006907) #17	GLOD5 (ENSPCTG00005006856) #20	GATA1 (ENSPCTG00005006811) #21	HDAC6 (ENSPCTG00005006652) #22	ERAS (ENSPCTG00005006613) #23	PCSK1N (ENSPCTG00005006586) #24	ENSPCTG00005006559 #25	PQBP1 (ENSPCTG00005006511) #26	SLC35A2 (ENSPCTG00005006418)	PIM2 (ENSPCTG00005006393)	OTUD5 (ENSPCTG00005006316) #27	KCND1 (ENSPCTG00005006272) #28	GRIPAP1 (ENSPCTG00005006138) #29	TFE3 (ENSPCTG00005006092) #30	CCDC120 (ENSPCTG00005005953)	PRAF2 (ENSPCTG00005005914) #31	WDR45 (ENSPCTG00005005819) #32	ENSPCTG00005005778	GPKOW (ENSPCTG00005005740) #33
Blue whale	MODERN SPECIES	40	ENSBMSG00010019667	ZNF182 (ENSBMSG00010019679)	ENSBMSG00010019691	ENSBMSG00010019705 #8	SLC38A5 (ENSBMSG00010019738) #9	FTSJ1 (ENSBMSG00010013830) #10	PORCN (ENSBMSG00010013964) #11	EBP (ENSBMSG00010014081) #12	TBC1D25 (ENSBMSG00010014115) #13	ENSBMSG00010014141 ##14	WDR13 (ENSBMSG00010014163) #15	WAS (ENSBMSG00010014198) #16	SUV39H1 (ENSBMSG00010014243) #17	GLOD5 (ENSBMSG00010014293) #20	GATA1 (ENSBMSG00010014317) #21	HDAC6 (ENSBMSG00010014376) #22	ERAS (ENSBMSG00010014416) #23	PCSK1N (ENSBMSG00010014426) #24	TIMM17B (ENSBMSG00010014450) #25	PQBP1 (ENSBMSG00010014494) #26	SLC35A2 (ENSBMSG00010014560)	PIM2 (ENSBMSG00010014679)	ENSBMSG00010014732 #27	KCND1 (ENSBMSG00010014802) #28	GRIPAP1 (ENSBMSG00010014874) #29	TFE3 (ENSBMSG00010014969) #30	CCDC120 (ENSBMSG00010015009)	WDR45 (ENSBMSG00010015179) #32	ENSBMSG00010015345	GPKOW (ENSBMSG00010015358) #33	MAGIX (ENSBMSG00010015396) #34
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Equus	ANCESTRAL SPECIES	27	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Donkey	MODERN SPECIES	36	ENSEASG00005027313	ENSEASG00005010957	ENSEASG00005008331	ENSEASG00005008327 #8	SLC38A5 (ENSEASG00005008319) #9	ENSEASG00005008272 #10	PORCN (ENSEASG00005029924) #11	EBP (ENSEASG00005033865) #12	TBC1D25 (ENSEASG00005008258) #13	ENSEASG00005008251 ##14	WDR13 (ENSEASG00005008241) #15	WAS (ENSEASG00005008232) #16	SUV39H1 (ENSEASG00005032520) #17	GLOD5 (ENSEASG00005019767) #20	GATA1 (ENSEASG00005019766) #21	HDAC6 (ENSEASG00005019298) #22	ERAS (ENSEASG00005024513) #23	PCSK1N (ENSEASG00005019237) #24	TIMM17B (ENSEASG00005036033) #25	PQBP1 (ENSEASG00005036427) #26	SLC35A2 (ENSEASG00005028169)	PIM2 (ENSEASG00005019217)	OTUD5 (ENSEASG00005019209) #27	KCND1 (ENSEASG00005019201) #28	GRIPAP1 (ENSEASG00005019166) #29	TFE3 (ENSEASG00005014881) #30	CCDC120 (ENSEASG00005003438)	PRAF2 (ENSEASG00005032624) #31	WDR45 (ENSEASG00005003448) #32	GPKOW (ENSEASG00005019852) #33	MAGIX (ENSEASG00005027344) #34
Horse	MODERN SPECIES	480	ENSECAG00000022175	ZNF630 (ENSECAG00000002226)	ENSECAG00000005068 #8	SLC38A5 (ENSECAG00000006306) #9	FTSJ1 (ENSECAG00000019260) #10	PORCN (ENSECAG00000008645) #11	EBP (ENSECAG00000022178) #12	TBC1D25 (ENSECAG00000023474) #13	RBM3 (ENSECAG00000024257) ##14	WDR13 (ENSECAG00000010542) #15	WAS (ENSECAG00000000253) #16	ENSECAG00000057249	SUV39H1 (ENSECAG00000015438) #17	GLOD5 (ENSECAG00000020516) #20	GATA1 (ENSECAG00000037888) #21	HDAC6 (ENSECAG00000000227) #22	ERAS (ENSECAG00000003691) #23	PCSK1N (ENSECAG00000038828) #24	PQBP1 (ENSECAG00000017372) #26	TIMM17B (ENSECAG00000045908) #25	SLC35A2 (ENSECAG00000000263)	PIM2 (ENSECAG00000007505)	OTUD5 (ENSECAG00000010819) #27	KCND1 (ENSECAG00000014802) #28	GRIPAP1 (ENSECAG00000019987) #29	TFE3 (ENSECAG00000020642) #30	CCDC120 (ENSECAG00000024890)	PRAF2 (ENSECAG00000046475) #31	WDR45 (ENSECAG00000006800) #32	GPKOW (ENSECAG00000018251) #33	MAGIX (ENSECAG00000023295) #34
Chiroptera	ANCESTRAL SPECIES	25	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Megabat	MODERN SPECIES	3735															GATA1 (ENSPVAG00000007638) #21	HDAC6 (ENSPVAG00000007639) #22	ERAS (ENSPVAG00000007641) #23	PCSK1N (ENSPVAG00000007642) #24	TIMM17B (ENSPVAG00000007643) #25	PQBP1 (ENSPVAG00000007644) #26	SLC35A2 (ENSPVAG00000007645)	PIM2 (ENSPVAG00000007647)	OTUD5 (ENSPVAG00000007649) #27	KCND1 (ENSPVAG00000007650) #28	GRIPAP1 (ENSPVAG00000007653) #29
Microchiroptera	ANCESTRAL SPECIES	25	ENSGT00940000162553	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Microbat	MODERN SPECIES	1133	ZNF81 (ENSMLUG00000011734)	ZNF182 (ENSMLUG00000000480)	ENSMLUG00000030438	ENSMLUG00000001798 #8	SLC38A5 (ENSMLUG00000003966) #9	FTSJ1 (ENSMLUG00000003977) #10	PORCN (ENSMLUG00000003981) #11	EBP (ENSMLUG00000023969) #12	ENSMLUG00000003989 #13	RBM3 (ENSMLUG00000003996) ##14	WDR13 (ENSMLUG00000004001) #15	WAS (ENSMLUG00000016537) #16	SUV39H1 (ENSMLUG00000016544) #17	GLOD5 (ENSMLUG00000030029) #20	ENSMLUG00000009063 #21	HDAC6 (ENSMLUG00000009081) #22	ERAS (ENSMLUG00000028170) #23	PCSK1N (ENSMLUG00000009125) #24	ENSMLUG00000009148 #25	PQBP1 (ENSMLUG00000009159) #26	SLC35A2 (ENSMLUG00000025042)	PIM2 (ENSMLUG00000009174)	OTUD5 (ENSMLUG00000009195) #27	KCND1 (ENSMLUG00000009225) #28	GRIPAP1 (ENSMLUG00000009232) #29	TFE3 (ENSMLUG00000030217) #30	CCDC120 (ENSMLUG00000010924)	PRAF2 (ENSMLUG00000029904) #31	ENSMLUG00000030743 #32	MAGIX (ENSMLUG00000028142) #34	ENSMLUG00000009327 #35
Greater horseshoe bat	MODERN SPECIES		UXT (ENSRFEG00010001368)	ENSRFEG00010001344	ZNF81 (ENSRFEG00010001320)	ENSRFEG00010001197	SLC38A5 (ENSRFEG00010001152) #9	FTSJ1 (ENSRFEG00010001062) #10	PORCN (ENSRFEG00010000961) #11	EBP (ENSRFEG00010000910) #12	TBC1D25 (ENSRFEG00010000893) #13	ENSRFEG00010000843 ##14	WDR13 (ENSRFEG00010000820) #15	WAS (ENSRFEG00010000800) #16	SUV39H1 (ENSRFEG00010000760) #17	GLOD5 (ENSRFEG00010000744) #20	GATA1 (ENSRFEG00010000723) #21	HDAC6 (ENSRFEG00010000672) #22	ERAS (ENSRFEG00010000648) #23	PCSK1N (ENSRFEG00010000636) #24	ENSRFEG00010000594 #25	PQBP1 (ENSRFEG00010000576) #26	SLC35A2 (ENSRFEG00010000550)	PIM2 (ENSRFEG00010000535)	OTUD5 (ENSRFEG00010000513) #27	KCND1 (ENSRFEG00010000496) #28	GRIPAP1 (ENSRFEG00010000438) #29	TFE3 (ENSRFEG00010000384) #30	CCDC120 (ENSRFEG00010000349)	PRAF2 (ENSRFEG00010000329) #31	WDR45 (ENSRFEG00010000248) #32	GPKOW (ENSRFEG00010000184) #33	MAGIX (ENSRFEG00010000174) #34
Carnivora	ANCESTRAL SPECIES	11	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Caniformia	ANCESTRAL SPECIES	26	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Caniformia_b	ANCESTRAL SPECIES	24	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Ursidae	ANCESTRAL SPECIES	28	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Ursus	ANCESTRAL SPECIES	122	ENSGT00940000161209	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000162553	ENSGT00940000163698	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000017780.e #25	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000158528.y.a.e #35	ENSGT01030000234637.b.c.b #37	ENSGT00940000159855	ENSGT00390000003809
American black bear	MODERN SPECIES	1752															GATA1 (ENSUAMG00000009069) #21	HDAC6 (ENSUAMG00000009148) #22	ERAS (ENSUAMG00000010942) #23	TIMM17B (ENSUAMG00000010948) #25	SLC35A2 (ENSUAMG00000010956)	PIM2 (ENSUAMG00000010961)	ENSUAMG00000010963 #27
Polar bear	MODERN SPECIES	91	ZNF41 (ENSUMAG00000008129)	ARAF (ENSUMAG00000008085)	UXT (ENSUMAG00000008053)	ENSUMAG00000008043	ZNF81 (ENSUMAG00000008037)	ENSUMAG00000008019	ZNF182 (ENSUMAG00000008013)	FTSJ1 (ENSUMAG00000007966) #10	PORCN (ENSUMAG00000007862) #11	EBP (ENSUMAG00000007841) #12	TBC1D25 (ENSUMAG00000007791) #13	RBM3 (ENSUMAG00000007785) ##14	WAS (ENSUMAG00000007712) #16	GLOD5 (ENSUMAG00000007692) #20	GATA1 (ENSUMAG00000007684) #21	HDAC6 (ENSUMAG00000007294) #22	ENSUMAG00000007252	ENSUMAG00000007251	OTUD5 (ENSUMAG00000007218) #27	ENSUMAG00000007168 #29	TFE3 (ENSUMAG00000007096) #30	ENSUMAG00000007076 #32	GPKOW (ENSUMAG00000007072) #33	ENSUMAG00000007070 #35	ENSUMAG00000007062 #37	ENSUMAG00000007052 ##37	CACNA1F (ENSUMAG00000006984)	FOXP3 (ENSUMAG00000006966)	ENSUMAG00000006962	ENSUMAG00000006959	CLCN5 (ENSUMAG00000004869)
Giant Panda	MODERN SPECIES	2288	ZNF182 (ENSAMEG00000012837)	ENSAMEG00000012812	ZNF630 (ENSAMEG00000029800)	ENSAMEG00000012801 #8	SLC38A5 (ENSAMEG00000012758) #9	ENSAMEG00000012735 #10	PORCN (ENSAMEG00000012689) #11	EBP (ENSAMEG00000012679) #12	TBC1D25 (ENSAMEG00000012666) #13	RBM3 (ENSAMEG00000012653) ##14	WDR13 (ENSAMEG00000012633) #15	WAS (ENSAMEG00000012609) #16	SUV39H1 (ENSAMEG00000012595) #17	GLOD5 (ENSAMEG00000026965) #20	GATA1 (ENSAMEG00000012588) #21	HDAC6 (ENSAMEG00000012489) #22	ERAS (ENSAMEG00000019682) #23	PCSK1N (ENSAMEG00000023496) #24	TIMM17B (ENSAMEG00000024786) #25	PQBP1 (ENSAMEG00000012460) #26	SLC35A2 (ENSAMEG00000012448)	PIM2 (ENSAMEG00000012433)	OTUD5 (ENSAMEG00000012420) #27	KCND1 (ENSAMEG00000012403) #28	GRIPAP1 (ENSAMEG00000012366) #29	TFE3 (ENSAMEG00000012353) #30	CCDC120 (ENSAMEG00000012341)	WDR45 (ENSAMEG00000012317) #32	PRAF2 (ENSAMEG00000025959) #31	GPKOW (ENSAMEG00000012303) #33	MAGIX (ENSAMEG00000028949) #34
Mustelinae	ANCESTRAL SPECIES	62	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34	ENSGT00940000158528.y.a.e #35
American mink	MODERN SPECIES	349	ZNF182 (ENSNVIG00000006120)	ENSNVIG00000006138	ZNF630 (ENSNVIG00000006158)	ENSNVIG00000006180 #8	SLC38A5 (ENSNVIG00000006225) #9	FTSJ1 (ENSNVIG00000006249) #10	PORCN (ENSNVIG00000006270) #11	EBP (ENSNVIG00000006482) #12	TBC1D25 (ENSNVIG00000006496) #13	ENSNVIG00000006510 ##14	WDR13 (ENSNVIG00000006529) #15	WAS (ENSNVIG00000006554) #16	SUV39H1 (ENSNVIG00000006587) #17	GLOD5 (ENSNVIG00000006614) #20	GATA1 (ENSNVIG00000006621) #21	HDAC6 (ENSNVIG00000006646) #22	ERAS (ENSNVIG00000006780) #23	TIMM17B (ENSNVIG00000006794) #25	PQBP1 (ENSNVIG00000006825) #26	SLC35A2 (ENSNVIG00000006862)	PIM2 (ENSNVIG00000006922)	OTUD5 (ENSNVIG00000006935) #27	KCND1 (ENSNVIG00000006987) #28	GRIPAP1 (ENSNVIG00000007030) #29	TFE3 (ENSNVIG00000007224) #30	CCDC120 (ENSNVIG00000007235)	WDR45 (ENSNVIG00000007299) #32	GPKOW (ENSNVIG00000007543) #33	MAGIX (ENSNVIG00000007559) #34	ENSNVIG00000007591 #35	PRICKLE3 (ENSNVIG00000007646) #36
Ferret	MODERN SPECIES	209	ENSMPUG00000013459	ENSMPUG00000013469 #8	SLC38A5 (ENSMPUG00000013487) #9	FTSJ1 (ENSMPUG00000013493) #10	PORCN (ENSMPUG00000013546) #11	EBP (ENSMPUG00000013608) #12	TBC1D25 (ENSMPUG00000013612) #13	RBM3 (ENSMPUG00000013632) ##14	WDR13 (ENSMPUG00000013638) #15	WAS (ENSMPUG00000013645) #16	SUV39H1 (ENSMPUG00000013648) #17	ENSMPUG00000013647	GLOD5 (ENSMPUG00000013652) #20	ENSMPUG00000018972	GATA1 (ENSMPUG00000013656) #21	HDAC6 (ENSMPUG00000013660) #22	PCSK1N (ENSMPUG00000013669) #24	TIMM17B (ENSMPUG00000013675) #25	PQBP1 (ENSMPUG00000013699) #26	SLC35A2 (ENSMPUG00000013719)	PIM2 (ENSMPUG00000013731)	OTUD5 (ENSMPUG00000013747) #27	KCND1 (ENSMPUG00000013750) #28	GRIPAP1 (ENSMPUG00000013785) #29	TFE3 (ENSMPUG00000013794) #30	CCDC120 (ENSMPUG00000013799)	WDR45 (ENSMPUG00000013804) #32	GPKOW (ENSMPUG00000013808) #33	MAGIX (ENSMPUG00000013813) #34	PRICKLE3 (ENSMPUG00000013814) #36	ENSMPUG00000013817 #35
Canidae	ANCESTRAL SPECIES	26	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a.p #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Canis_lupus	ANCESTRAL SPECIES	26	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a.p #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.b.j.a ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT01080000259842	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33
Dog	MODERN SPECIES	144	CFP (ENSCAFG00845030596)	ELK1 (ENSCAFG00845030612)	UXT (ENSCAFG00845030632)	ZNF81 (ENSCAFG00845030651)	ZNF182 (ENSCAFG00845030666)	ENSCAFG00845030671	ZNF630 (ENSCAFG00845030685)	ENSCAFG00845030699 #8	SLC38A5 (ENSCAFG00845030709) #9	FTSJ1 (ENSCAFG00845030730) #10	PORCN (ENSCAFG00845030766) #11	ENSCAFG00845030798 #12	SUV39H1 (ENSCAFG00845030815) #17	GLOD5 (ENSCAFG00845030858) #20	GATA1 (ENSCAFG00845030905) #21	HDAC6 (ENSCAFG00845030925) #22	ERAS (ENSCAFG00845030941) #23	PCSK1N (ENSCAFG00845030946) #24	ENSCAFG00845030954	SLC35A2 (ENSCAFG00845030973)	PQBP1 (ENSCAFG00845031000) #26	PIM2 (ENSCAFG00845031001)	OTUD5 (ENSCAFG00845031005) #27	KCND1 (ENSCAFG00845031009) #28	GRIPAP1 (ENSCAFG00845031014) #29	TFE3 (ENSCAFG00845031022) #30	CCDC120 (ENSCAFG00845031030)	PRAF2 (ENSCAFG00845031034) #31	PRAF2 (ENSCAFG00845031037) #32	PRICKLE3 (ENSCAFG00845031043) #36	ENSCAFG00845031047
Dingo	MODERN SPECIES	247	ENSCAFG00020021361	ZNF182 (ENSCAFG00020021360)	ENSCAFG00020021356 #8	SLC38A5 (ENSCAFG00020021352) #9	FTSJ1 (ENSCAFG00020021351) #10	PORCN (ENSCAFG00020021349) #11	ENSCAFG00020021346 #12	TBC1D25 (ENSCAFG00020021345) #13	ENSCAFG00020021344 #14	ENSCAFG00020021343	WDR13 (ENSCAFG00020021341) #15	WAS (ENSCAFG00020021337) #16	SUV39H1 (ENSCAFG00020021335) #17	GLOD5 (ENSCAFG00020021332) #20	GATA1 (ENSCAFG00020021331) #21	HDAC6 (ENSCAFG00020020385) #22	ERAS (ENSCAFG00020020329) #23	PCSK1N (ENSCAFG00020020325) #24	ENSCAFG00020020323	TIMM17B (ENSCAFG00020020319) #25	PQBP1 (ENSCAFG00020020314) #26	SLC35A2 (ENSCAFG00020020311)	PIM2 (ENSCAFG00020020303)	OTUD5 (ENSCAFG00020020300) #27	KCND1 (ENSCAFG00020020294) #28	GRIPAP1 (ENSCAFG00020020285) #29	TFE3 (ENSCAFG00020020278) #30	CCDC120 (ENSCAFG00020020270)	PRAF2 (ENSCAFG00020020266) #31	WDR45 (ENSCAFG00020020262) #32	GPKOW (ENSCAFG00020020258) #33
Red fox	MODERN SPECIES	171	ZNF81 (ENSVVUG00000017593)	ZNF182 (ENSVVUG00000017595)	ENSVVUG00000017597	ZNF630 (ENSVVUG00000017598)	ENSVVUG00000017602 #8	SLC38A5 (ENSVVUG00000017611) #9	FTSJ1 (ENSVVUG00000017640) #10	PORCN (ENSVVUG00000017648) #11	TBC1D25 (ENSVVUG00000017664) #13	RBM3 (ENSVVUG00000017670) ##14	WDR13 (ENSVVUG00000017695) #15	WAS (ENSVVUG00000017704) #16	SUV39H1 (ENSVVUG00000017748) #17	GLOD5 (ENSVVUG00000017754) #20	GATA1 (ENSVVUG00000017758) #21	HDAC6 (ENSVVUG00000017760) #22	ERAS (ENSVVUG00000017770) #23	PCSK1N (ENSVVUG00000017773) #24	ENSVVUG00000017774	TIMM17B (ENSVVUG00000017777) #25	PQBP1 (ENSVVUG00000017780) #26	SLC35A2 (ENSVVUG00000017783)	PIM2 (ENSVVUG00000017785)	OTUD5 (ENSVVUG00000017789) #27	KCND1 (ENSVVUG00000017790) #28	GRIPAP1 (ENSVVUG00000017793) #29	TFE3 (ENSVVUG00000017798) #30	CCDC120 (ENSVVUG00000017802)	PRAF2 (ENSVVUG00000017804) #31	WDR45 (ENSVVUG00000017808) #32	GPKOW (ENSVVUG00000017815) #33
Felidae	ANCESTRAL SPECIES	12	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Cat	MODERN SPECIES	252	ZNF182 (ENSFCAG00000030362)	ENSFCAG00000037221	ZNF630 (ENSFCAG00000044726)	ENSFCAG00000047414 #8	SLC38A5 (ENSFCAG00000008530) #9	FTSJ1 (ENSFCAG00000026453) #10	PORCN (ENSFCAG00000008533) #11	EBP (ENSFCAG00000031944) #12	TBC1D25 (ENSFCAG00000008538) #13	ENSFCAG00000002245 ##14	WDR13 (ENSFCAG00000008539) #15	WAS (ENSFCAG00000018126) #16	SUV39H1 (ENSFCAG00000002566) #17	GLOD5 (ENSFCAG00000002567) #20	GATA1 (ENSFCAG00000010904) #21	HDAC6 (ENSFCAG00000002568) #22	ERAS (ENSFCAG00000052277) #23	PCSK1N (ENSFCAG00000011223) #24	TIMM17B (ENSFCAG00000002569) #25	PQBP1 (ENSFCAG00000002570) #26	SLC35A2 (ENSFCAG00000002571)	PIM2 (ENSFCAG00000022467)	OTUD5 (ENSFCAG00000002572) #27	KCND1 (ENSFCAG00000002579) #28	GRIPAP1 (ENSFCAG00000002573) #29	TFE3 (ENSFCAG00000002574) #30	CCDC120 (ENSFCAG00000028936)	WDR45 (ENSFCAG00000002577) #32	GPKOW (ENSFCAG00000003818) #33	ENSFCAG00000028597	MAGIX (ENSFCAG00000003819) #34
Panthera	ANCESTRAL SPECIES	39	ENSGT00940000162205	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Tiger	DUPLICATION
Tiger	MODERN SPECIES	213											WDR13 (ENSPTIG00000008576) #15	WAS (ENSPTIG00000007456) #16	SUV39H1 (ENSPTIG00000006678) #17	GLOD5 (ENSPTIG00000005943) #20	GATA1 (ENSPTIG00000005667) #21	ENSPTIG00000004413 #22	ENSPTIG00000020781 #22	ERAS (ENSPTIG00000003826) #23	TIMM17B (ENSPTIG00000020403) #25	PQBP1 (ENSPTIG00000019101) #26	ENSPTIG00000017671	PIM2 (ENSPTIG00000017127)	OTUD5 (ENSPTIG00000016746) #27	ENSPTIG00000016518 #28	GRIPAP1 (ENSPTIG00000014563) #29	TFE3 (ENSPTIG00000013893) #30	PRAF2 (ENSPTIG00000013572) #31	WDR45 (ENSPTIG00000010157) #32	GPKOW (ENSPTIG00000008398) #33
Tiger	MODERN SPECIES	213										WDR13 (ENSPTIG00000008576) #15	WAS (ENSPTIG00000007456) #16	SUV39H1 (ENSPTIG00000006678) #17	GLOD5 (ENSPTIG00000005943) #20	GATA1 (ENSPTIG00000005667) #21	ENSPTIG00000004413 #22	ENSPTIG00000020781 #22	ERAS (ENSPTIG00000003826) #23	TIMM17B (ENSPTIG00000020403) #25	PQBP1 (ENSPTIG00000019101) #26	ENSPTIG00000017671	PIM2 (ENSPTIG00000017127)	OTUD5 (ENSPTIG00000016746) #27	ENSPTIG00000016518 #28	GRIPAP1 (ENSPTIG00000014563) #29	TFE3 (ENSPTIG00000013893) #30	PRAF2 (ENSPTIG00000013572) #31	WDR45 (ENSPTIG00000010157) #32	GPKOW (ENSPTIG00000008398) #33
Panthera_a	ANCESTRAL SPECIES	39	ENSGT00940000163698	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153524.b.a.b.j.a ##14	ENSGT00940000153524.b.b ##14	ENSGT00940000153634.a #15	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
lion	MODERN SPECIES	88	ENSPLOG00000022716	ZNF182 (ENSPLOG00000014582)	ZNF630 (ENSPLOG00000014667)	ENSPLOG00000014780 #8	SLC38A5 (ENSPLOG00000015071) #9	FTSJ1 (ENSPLOG00000015169) #10	PORCN (ENSPLOG00000015411) #11	EBP (ENSPLOG00000015923) #12	TBC1D25 (ENSPLOG00000015966) #13	ENSPLOG00000016016 ##14	WDR13 (ENSPLOG00000016052) #15	WAS (ENSPLOG00000016098) #16	SUV39H1 (ENSPLOG00000016147) #17	GLOD5 (ENSPLOG00000016225) #20	GATA1 (ENSPLOG00000016279) #21	HDAC6 (ENSPLOG00000016347) #22	ERAS (ENSPLOG00000016421) #23	PCSK1N (ENSPLOG00000016448) #24	TIMM17B (ENSPLOG00000016478) #25	PQBP1 (ENSPLOG00000016512) #26	SLC35A2 (ENSPLOG00000016600)	PIM2 (ENSPLOG00000016754)	OTUD5 (ENSPLOG00000016836) #27	KCND1 (ENSPLOG00000016999) #28	GRIPAP1 (ENSPLOG00000017133) #29	TFE3 (ENSPLOG00000017261) #30	CCDC120 (ENSPLOG00000017322)	WDR45 (ENSPLOG00000017571) #32	PRAF2 (ENSPLOG00000017750) #31	GPKOW (ENSPLOG00000017787) #33	GPR173 (ENSPLOG00000017827)
leopard	MODERN SPECIES	69	ZNF182 (ENSPPRG00000001597)	ENSPPRG00000001440	ZNF630 (ENSPPRG00000001282)	SLC38A5 (ENSPPRG00000000636) #9	FTSJ1 (ENSPPRG00000000249) #10	PORCN (ENSPPRG00000023093) #11	EBP (ENSPPRG00000016220) #12	TBC1D25 (ENSPPRG00000016058) #13	ENSPPRG00000013361 #14	ENSPPRG00000013315 ##14	WDR13 (ENSPPRG00000012943) #15	WAS (ENSPPRG00000012043) #16	SUV39H1 (ENSPPRG00000011651) #17	GLOD5 (ENSPPRG00000011142) #20	GATA1 (ENSPPRG00000010828) #21	HDAC6 (ENSPPRG00000010597) #22	ERAS (ENSPPRG00000022016) #23	PCSK1N (ENSPPRG00000010202) #24	TIMM17B (ENSPPRG00000010152) #25	PQBP1 (ENSPPRG00000009961) #26	SLC35A2 (ENSPPRG00000007850)	PIM2 (ENSPPRG00000005796)	OTUD5 (ENSPPRG00000005742) #27	KCND1 (ENSPPRG00000003846) #28	GRIPAP1 (ENSPPRG00000003589) #29	TFE3 (ENSPPRG00000001116) #30	CCDC120 (ENSPPRG00000000745)	PRAF2 (ENSPPRG00000022973) #31	WDR45 (ENSPPRG00000023218) #32	GPKOW (ENSPPRG00000016972) #33	MAGIX (ENSPPRG00000016072) #34
Atlantogenata	ANCESTRAL SPECIES	59	ENSGT00940000162614	ENSGT00940000162205	ENSGT00940000162921 #7	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00940000160063 #17	ENSGT00730000110895.b.b #16	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Afrotheria	ANCESTRAL SPECIES	72	ENSGT00390000018078	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00940000160063 #17	ENSGT00730000110895.b.b #16	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Afrotheria_a	ANCESTRAL SPECIES	69	ENSGT00390000018078	ENSGT00940000162614	ENSGT00940000162205	ENSGT00390000012484 #8	ENSGT00940000161233 #9	ENSGT00730000111146 #10	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000153524.b.a.a #14	ENSGT00940000153634.a #15	ENSGT00940000160063 #17	ENSGT00730000110895.b.b #16	ENSGT00940000153941.a.b #20	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Elephant	MODERN SPECIES	453	UXT (ENSLAFG00000006884)	ZNF182 (ENSLAFG00000004532)	ENSLAFG00000009001	ENSLAFG00000004535 #8	ENSLAFG00000030834 #9	FTSJ1 (ENSLAFG00000032618) #10	ENSLAFG00000005437 #12	PORCN (ENSLAFG00000010030) #11	TBC1D25 (ENSLAFG00000004899) #13	RBM3 (ENSLAFG00000007003) #14	WDR13 (ENSLAFG00000004716) #15	SUV39H1 (ENSLAFG00000005118) #17	WAS (ENSLAFG00000010329) #16	GLOD5 (ENSLAFG00000011866) #20	GATA1 (ENSLAFG00000029714) #21	HDAC6 (ENSLAFG00000003822) #22	ERAS (ENSLAFG00000003828) #23	PCSK1N (ENSLAFG00000030200) #24	TIMM17B (ENSLAFG00000007531) #25	PQBP1 (ENSLAFG00000007534) #26	SLC35A2 (ENSLAFG00000007537)	PIM2 (ENSLAFG00000007542)	OTUD5 (ENSLAFG00000012103) #27	KCND1 (ENSLAFG00000010111) #28	GRIPAP1 (ENSLAFG00000032036) #29	TFE3 (ENSLAFG00000025585) #30	CCDC120 (ENSLAFG00000027582)	PRAF2 (ENSLAFG00000010856) #31	WDR45 (ENSLAFG00000010857) #32	GPKOW (ENSLAFG00000005896) #33	MAGIX (ENSLAFG00000023267) #34
Hyrax	MODERN SPECIES	9333																HDAC6 (ENSPCAG00000003465) #22
Tenrec	MODERN SPECIES	6475																ENSETEG00000006474 #22
Xenarthra	ANCESTRAL SPECIES	63															ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000162901 #23	ENSGT00390000013488 #24	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00950000182827.B	ENSGT00940000161689	ENSGT00940000158963 #27	ENSGT00940000162057 #28	ENSGT00720000108868 #29	ENSGT00940000157503 #30	ENSGT00940000154102.b	ENSGT00390000008631.b #31	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000162529 #34
Armadillo	MODERN SPECIES	2193					ENSDNOG00000041551 #12	TBC1D25 (ENSDNOG00000007135) #13	ENSDNOG00000010420 #14	WDR13 (ENSDNOG00000012751) #15	ENSDNOG00000043712	ENSDNOG00000031239	WAS (ENSDNOG00000034763) #16	SUV39H1 (ENSDNOG00000024286) #17	ENSDNOG00000010600	ENSDNOG00000040933	GATA1 (ENSDNOG00000046529) #21	HDAC6 (ENSDNOG00000002754) #22	ERAS (ENSDNOG00000014657) #23	PCSK1N (ENSDNOG00000045077) #24	TIMM17B (ENSDNOG00000047305) #25	PQBP1 (ENSDNOG00000015637) #26	SLC35A2 (ENSDNOG00000015641)	PIM2 (ENSDNOG00000015644)	OTUD5 (ENSDNOG00000032210) #27	KCND1 (ENSDNOG00000033902) #28	GRIPAP1 (ENSDNOG00000038321) #29	TFE3 (ENSDNOG00000039173) #30	CCDC120 (ENSDNOG00000017059)	PRAF2 (ENSDNOG00000031883) #31	WDR45 (ENSDNOG00000046908) #32	GPKOW (ENSDNOG00000016647) #33	ENSDNOG00000039101
Marsupialia	ANCESTRAL SPECIES	29	ENSGT00940000159855	ENSGT01030000234637.b.c #37	ENSGT00940000153629.a.b #36	ENSGT00940000158528 #35	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000162057 #28	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C.f #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000161233 #9	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153634.a #15	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00390000017352.a	ENSGT00390000006665.b	ENSGT00940000153231.A
Opossum	MODERN SPECIES	627	ENSMODG00000027767	ENSMODG00000009847	SYP (ENSMODG00000009899) #37	CCDC22 (ENSMODG00000009860)	CCDC120 (ENSMODG00000009910)	TFE3 (ENSMODG00000009925) #30	GRIPAP1 (ENSMODG00000010018) #29	ENSMODG00000010033 #28	PIM2 (ENSMODG00000010037)	SLC35A2 (ENSMODG00000010048)	ENSMODG00000010063 #26	TIMM17B (ENSMODG00000010069) #25	CDK20 (ENSMODG00000010092)	GATA1 (ENSMODG00000010099) #21	ENSMODG00000044553	HDAC6 (ENSMODG00000010166) #22	PORCN (ENSMODG00000010236) #11	EBP (ENSMODG00000010248) #12	TBC1D25 (ENSMODG00000010259) #13	ENSMODG00000010292 #9	WAS (ENSMODG00000010317) #16	SUV39H1 (ENSMODG00000010324) #17	WDR13 (ENSMODG00000010303) #15	ENSMODG00000043220	GRM6 (ENSMODG00000010422)	ABT1 (ENSMODG00000010429)	ENSMODG00000010534	CXXC1 (ENSMODG00000010555)	ENSMODG00000037413	MON1B (ENSMODG00000010558)	ENSMODG00000010588
Marsupialia_b	ANCESTRAL SPECIES	31									ENSGT00940000158963.c #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C.f #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000161233 #9	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153634.a #15	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044.a	ENSGT00730000111044.b	ENSGT00390000017352.a	ENSGT00390000006665.b
Diprotodontia	ANCESTRAL SPECIES	60									ENSGT00940000158963.c #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C.f #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000161233 #9	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153634.a #15	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b.g	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044.a	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00940000160369.a
Diprotodontia_a	ANCESTRAL SPECIES	58									ENSGT00940000158963.c #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C.f #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT01030000234564.a.a.b.a #11	ENSGT00530000063715.a #12	ENSGT00940000159173 #13	ENSGT00940000161233 #9	ENSGT00730000110895.b.b #16	ENSGT00940000160063 #17	ENSGT00940000153634.a #15	ENSGT00390000017639	ENSGT01030000234648.a.b.a.b.g	ENSGT00390000002062	ENSGT00950000183005.a.a	ENSGT00730000111044.a	ENSGT00390000006665.b	ENSGT00940000153231.A	ENSGT00940000160369.a
Common wonbat	MODERN SPECIES	1079	CACNA1F (ENSVURG00010011168)	SYP (ENSVURG00010010730) #37	PRICKLE3 (ENSVURG00010010711) #36	ENSVURG00010010696 #35	CCDC120 (ENSVURG00010010671)	TFE3 (ENSVURG00010010649) #30	GRIPAP1 (ENSVURG00010010555) #29	ENSVURG00010010519	ENSVURG00010010507 #27	PIM2 (ENSVURG00010010500)	SLC35A2 (ENSVURG00010010497)	ENSVURG00010010494 #26	TIMM17B (ENSVURG00010010486) #25	CDK20 (ENSVURG00010010475)	GATA1 (ENSVURG00010010465) #21	HDAC6 (ENSVURG00010010455) #22	PORCN (ENSVURG00010010369) #11	EBP (ENSVURG00010010353) #12	TBC1D25 (ENSVURG00010010343) #13	SLC38A5 (ENSVURG00010010329) #9	WAS (ENSVURG00010010322) #16	ENSVURG00010010306	ABT1 (ENSVURG00010010299)
koala	MODERN SPECIES	294	CACNA1F (ENSPCIG00000005925)	SYP (ENSPCIG00000027881) #37	PRICKLE3 (ENSPCIG00000027884) #36	PLP2 (ENSPCIG00000027886) #35	CCDC120 (ENSPCIG00000027887)	TFE3 (ENSPCIG00000027889) #30	GRIPAP1 (ENSPCIG00000027893) #29	ENSPCIG00000027895	OTUD5 (ENSPCIG00000027896) #27	PIM2 (ENSPCIG00000027897)	ENSPCIG00000027902	ENSPCIG00000027905 #26	TIMM17B (ENSPCIG00000027908) #25	CDK20 (ENSPCIG00000027909)	GATA1 (ENSPCIG00000027911) #21	HDAC6 (ENSPCIG00000027912) #22	PORCN (ENSPCIG00000027915) #11	EBP (ENSPCIG00000027919) #12	TBC1D25 (ENSPCIG00000027924) #13	SLC38A5 (ENSPCIG00000007378) #9	ENSPCIG00000007542	SUV39H1 (ENSPCIG00000007547) #17	WDR13 (ENSPCIG00000007549) #15	ENSPCIG00000027932	GRM6 (ENSPCIG00000027935)	ENSPCIG00000027936	ENSPCIG00000027937	CXXC1 (ENSPCIG00000027942)	MON1B (ENSPCIG00000027954)	IMP4 (ENSPCIG00000027960)	RBM10 (ENSPCIG00000027962)
Wallaby	MODERN SPECIES	728																ENSMEUG00000011661 #22
Tasmanian devil	MODERN SPECIES	21	CCDC22 (ENSSHAG00000029776)	CACNA1F (ENSSHAG00000001197)	SYP (ENSSHAG00000025026) #37	ENSSHAG00000004508 #36	ENSSHAG00000027473 #35	ENSSHAG00000031604	TFE3 (ENSSHAG00000003327) #30	GRIPAP1 (ENSSHAG00000003080) #29	ENSSHAG00000002843	PIM2 (ENSSHAG00000022404)	OTUD5 (ENSSHAG00000024529) #27	ENSSHAG00000021727	ENSSHAG00000001555 #25	ENSSHAG00000021486	ENSSHAG00000021720 #21	ENSSHAG00000001040 #22	ENSSHAG00000001709 #26	ENSSHAG00000032369 #11	ENSSHAG00000000940 #13	ENSSHAG00000002882 #16	ENSSHAG00000022637 #9	ENSSHAG00000000138 #17	ENSSHAG00000001207 #15	ENSSHAG00000028465	ENSSHAG00000003137	ENSSHAG00000003493	ENSSHAG00000003661	ENSSHAG00000003967	ENSSHAG00000008525	ENSSHAG00000008415	ENSSHAG00000008267
Platypus	MODERN SPECIES	17	SYP (ENSOANG00000047567) #37	PRICKLE3 (ENSOANG00000013579) #36	PLP2 (ENSOANG00000013578) #35	ENSOANG00000013577 #33	WDR45 (ENSOANG00000044470) #32	TFE3 (ENSOANG00000013574) #30	GRIPAP1 (ENSOANG00000051019) #29	ENSOANG00000013573	OTUD5 (ENSOANG00000043640) #27	ENSOANG00000038972	SLC35A2 (ENSOANG00000048927)	PQBP1 (ENSOANG00000031396) #26	TIMM17B (ENSOANG00000014281) #25	CDK20 (ENSOANG00000010766)	GATA1 (ENSOANG00000010765) #21	HDAC6 (ENSOANG00000002256) #22	ENSOANG00000047880 #10	PORCN (ENSOANG00000005775) #11	EBP (ENSOANG00000012972) #12	TBC1D25 (ENSOANG00000038580) #13	ENSOANG00000014584	SLC38A5 (ENSOANG00000036935) #9	WAS (ENSOANG00000015230) #16	SUV39H1 (ENSOANG00000015959) #17	WDR13 (ENSOANG00000006932) #15	ENSOANG00000038903	GRM6 (ENSOANG00000014586)	ABT1 (ENSOANG00000014590)	ENSOANG00000051319	ENSOANG00000042027	CXXC1 (ENSOANG00000014594)
Sauria	ANCESTRAL SPECIES	39	ENSGT00390000011272	ENSGT00940000161383	ENSGT00940000166196	ENSGT00390000013740	ENSGT00550000074803	ENSGT00390000016224.i	ENSGT00950000182824.a.b.b	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000163880	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00950000182835.c.c	ENSGT00940000164454	ENSGT00940000162980	ENSGT00390000003348	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00900000142661.a	ENSGT00940000155170	ENSGT00390000010825.a
Lepidosauria	ANCESTRAL SPECIES	38	ENSGT00940000166825	ENSGT00730000111146 #10	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00900000142661.a	ENSGT00940000156319	ENSGT00940000165056
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1338							ENSSPUG00000005449	GRIPAP1 (ENSSPUG00000005484) #29	ENSSPUG00000005543 #30	CCDC120 (ENSSPUG00000005552)	TIMM17B (ENSSPUG00000005579) #25	CDK20 (ENSSPUG00000005620)	GATA1 (ENSSPUG00000005680) #21	ENSSPUG00000005686	ENSSPUG00000005699 #22	ENSSPUG00000005706 #22	PLP2 (ENSSPUG00000005718) #35
tuatara	MODERN SPECIES	1338								ENSSPUG00000005449	GRIPAP1 (ENSSPUG00000005484) #29	ENSSPUG00000005543 #30	CCDC120 (ENSSPUG00000005552)	TIMM17B (ENSSPUG00000005579) #25	CDK20 (ENSSPUG00000005620)	GATA1 (ENSSPUG00000005680) #21	ENSSPUG00000005686	ENSSPUG00000005699 #22	ENSSPUG00000005706 #22	PLP2 (ENSSPUG00000005718) #35
Episquamata	ANCESTRAL SPECIES	23	ENSGT00730000111146 #10	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000155472.a.a	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00940000164755.C	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00940000153588.b	ENSGT00390000003937
Laterata	ANCESTRAL SPECIES	7	ENSGT00730000111146 #10	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000155472.a.a	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00940000164755.C	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000162980	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877	ENSGT00940000156319
Common wall lizard	MODERN SPECIES	8	PRAF2 (ENSPMRG00000018857) #31	ENSPMRG00000018863	CCDC120 (ENSPMRG00000018879)	TFE3 (ENSPMRG00000018894) #30	GRIPAP1 (ENSPMRG00000018908) #29	ENSPMRG00000018926	SLC35A2 (ENSPMRG00000018937)	OTUD5 (ENSPMRG00000018946) #27	PIM2 (ENSPMRG00000018956)	PQBP1 (ENSPMRG00000018963) #26	TIMM17B (ENSPMRG00000018977) #25	ENSPMRG00000018984	CDK20 (ENSPMRG00000018996)	GATA1 (ENSPMRG00000019007) #21	ENSPMRG00000019014	HDAC6 (ENSPMRG00000019050) #22	ENSPMRG00000019180	ENSPMRG00000019185	ENSPMRG00000019191	ENSPMRG00000019200 #35	PRICKLE3 (ENSPMRG00000019210) #36	ALAS2 (ENSPMRG00000019223)	APEX2 (ENSPMRG00000019287)	PFKFB1 (ENSPMRG00000019509)	ITIH6 (ENSPMRG00000020797)	PHF8 (ENSPMRG00000021005)	FAM120C (ENSPMRG00000021045)	WNK3 (ENSPMRG00000021103)	ENSPMRG00000021178	TSR2 (ENSPMRG00000021183)	FGD1 (ENSPMRG00000021196)
Argentine black and white tegu	MODERN SPECIES	12	GPKOW (ENSSMRG00000019242) #33	WDR45 (ENSSMRG00000019241) #32	PRAF2 (ENSSMRG00000019240) #31	CCDC120 (ENSSMRG00000019239)	TFE3 (ENSSMRG00000019237) #30	GRIPAP1 (ENSSMRG00000019236) #29	ENSSMRG00000019235	OTUD5 (ENSSMRG00000019233) #27	PIM2 (ENSSMRG00000019232)	SLC35A2 (ENSSMRG00000019231)	PQBP1 (ENSSMRG00000019230) #26	TIMM17B (ENSSMRG00000019229) #25	ENSSMRG00000019228	CDK20 (ENSSMRG00000019227)	ENSSMRG00000019226 #21	HDAC6 (ENSSMRG00000019223) #22	ENSSMRG00000019221	ENSSMRG00000019220	ENSSMRG00000019219	ENSSMRG00000019211	PFKFB1 (ENSSMRG00000019210)	APEX2 (ENSSMRG00000019209)	ALAS2 (ENSSMRG00000019208)	PRICKLE3 (ENSSMRG00000019206) #36	ENSSMRG00000019205 #35	ENSSMRG00000019204	ITIH6 (ENSSMRG00000019135)	PHF8 (ENSSMRG00000019134)	FAM120C (ENSSMRG00000019133)	SSR4 (ENSSMRG00000019131)	WNK3 (ENSSMRG00000019129)
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000166825	ENSGT00730000111146 #10	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00940000164755.C	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877
Elapidae	ANCESTRAL SPECIES	21	ENSGT00730000111146 #10	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000155472.a.a	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00940000164755.C	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980.a	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877
Elapidae_a	ANCESTRAL SPECIES	23	ENSGT00730000111146 #10	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000155472.a.a	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00940000164755.C	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980.a	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877
Acanthophiinae	ANCESTRAL SPECIES	23	ENSGT00530000063715.a.t #12	ENSGT00730000111146 #10	ENSGT00390000015154 #33	ENSGT00940000155657 #32	ENSGT00390000008631.b #31	ENSGT00940000154102.b	ENSGT00940000157503 #30	ENSGT00720000108868 #29	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00940000164755.C	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000163627	ENSGT00940000162980.a	ENSGT00940000157847	ENSGT00530000063168.a.a.b	ENSGT00940000160145.b	ENSGT00390000012692	ENSGT00940000159438	ENSGT00940000155877
Eastern brown snake	MODERN SPECIES	52	GPKOW (ENSPTXG00000008255) #33	WDR45 (ENSPTXG00000008253) #32	PRAF2 (ENSPTXG00000008251) #31	CCDC120 (ENSPTXG00000008213)	TFE3 (ENSPTXG00000008211) #30	GRIPAP1 (ENSPTXG00000008207) #29	ENSPTXG00000008205	OTUD5 (ENSPTXG00000008201) #27	PIM2 (ENSPTXG00000008198)	SLC35A2 (ENSPTXG00000008196)	PQBP1 (ENSPTXG00000008194) #26	TIMM17B (ENSPTXG00000008191) #25	ENSPTXG00000008189	CDK20 (ENSPTXG00000008188)	GATA1 (ENSPTXG00000008186) #21	HDAC6 (ENSPTXG00000007959) #22	ENSPTXG00000007920	ENSPTXG00000007914 #35	PRICKLE3 (ENSPTXG00000007910) #36	ALAS2 (ENSPTXG00000007906)	APEX2 (ENSPTXG00000007903)	PFKFB1 (ENSPTXG00000007895)	ENSPTXG00000007890	ITIH6 (ENSPTXG00000007849)	PHF8 (ENSPTXG00000007848)	WNK3 (ENSPTXG00000007846)	TSR2 (ENSPTXG00000007843)	FGD1 (ENSPTXG00000006759)	GNL3L (ENSPTXG00000006749)	HUWE1 (ENSPTXG00000006728)	ENSPTXG00000006712
Mainland tiger snake	MODERN SPECIES	81	WDR45 (ENSNSUG00000019830) #32	PRAF2 (ENSNSUG00000019829) #31	CCDC120 (ENSNSUG00000019828)	TFE3 (ENSNSUG00000019827) #30	GRIPAP1 (ENSNSUG00000019826) #29	ENSNSUG00000019825	OTUD5 (ENSNSUG00000019824) #27	PIM2 (ENSNSUG00000019823)	SLC35A2 (ENSNSUG00000019797)	PQBP1 (ENSNSUG00000019794) #26	TIMM17B (ENSNSUG00000019793) #25	ENSNSUG00000019792	ENSNSUG00000019790	ENSNSUG00000019789	GATA1 (ENSNSUG00000019787) #21	HDAC6 (ENSNSUG00000019782) #22	ENSNSUG00000019776	ENSNSUG00000019772	ENSNSUG00000019770	ENSNSUG00000019769 #35	PRICKLE3 (ENSNSUG00000019767) #36	ALAS2 (ENSNSUG00000019765)	APEX2 (ENSNSUG00000019753)	PFKFB1 (ENSNSUG00000019752)	ENSNSUG00000019751	ITIH6 (ENSNSUG00000019750)	PHF8 (ENSNSUG00000019749)	FAM120C (ENSNSUG00000019748)	WNK3 (ENSNSUG00000019747)	TSR2 (ENSNSUG00000019746)	FGD1 (ENSNSUG00000019745)
Blue-lipped sea krait	MODERN SPECIES	10806																HDAC6 (ENSLLTG00000006434) #22
Indian cobra	MODERN SPECIES	1	GPKOW (ENSNNAG00000010730) #33	WDR45 (ENSNNAG00000010759) #32	PRAF2 (ENSNNAG00000010800) #31	CCDC120 (ENSNNAG00000010874)	TFE3 (ENSNNAG00000010930) #30	GRIPAP1 (ENSNNAG00000010983) #29	ENSNNAG00000011249	OTUD5 (ENSNNAG00000011281) #27	PIM2 (ENSNNAG00000011316)	SLC35A2 (ENSNNAG00000011331)	PQBP1 (ENSNNAG00000011352) #26	TIMM17B (ENSNNAG00000011378) #25	ENSNNAG00000011393	CDK20 (ENSNNAG00000011421)	GATA1 (ENSNNAG00000011453) #21	HDAC6 (ENSNNAG00000011493) #22	ENSNNAG00000011607	ENSNNAG00000011654 #35	PRICKLE3 (ENSNNAG00000011671) #36	ENSNNAG00000011726	APEX2 (ENSNNAG00000011774)	PFKFB1 (ENSNNAG00000011906)	NSMCE3 (ENSNNAG00000013747)	ENSNNAG00000013761	ENSNNAG00000013810	PHF8 (ENSNNAG00000013830)	FAM120C (ENSNNAG00000013861)	WNK3 (ENSNNAG00000013960)	TSR2 (ENSNNAG00000014165)	FGD1 (ENSNNAG00000014192)	ENSNNAG00000014231
Archelosauria	ANCESTRAL SPECIES	46			ENSGT00940000162821	ENSGT00890000139436.A.b	ENSGT00390000013859	ENSGT00940000161807	ENSGT00390000003809	ENSGT00940000159855	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35	ENSGT00940000153629.a.b #36	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00950000182835.c.c	ENSGT00940000164454	ENSGT00940000162980	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b	ENSGT00530000063168.a.a.b	ENSGT00390000003348	ENSGT00940000155877
Archosauria	ANCESTRAL SPECIES	103														ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35
Aves	ANCESTRAL SPECIES	101														ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35
Neognathae	ANCESTRAL SPECIES	78														ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657 #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35
Neognathae_b	ANCESTRAL SPECIES	59									ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00950000182827.B	ENSGT01030000234564.a.a.b.a #11	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657.l #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35
Passeriformes	ANCESTRAL SPECIES	63								ENSGT00390000015332	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00950000182827.B	ENSGT01030000234564.a.a.b.a #11	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657.l #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35	ENSGT00730000111146 #10
Great tit	MODERN SPECIES	292									ENSPMJG00000003268	ENSPMJG00000003244	G6PD (ENSPMJG00000003236)	IKBKG (ENSPMJG00000003235)	SEPHS2 (ENSPMJG00000003234)	PORCN (ENSPMJG00000003210) #11	ENSPMJG00000003201	HDAC6 (ENSPMJG00000002847) #22	WDR45 (ENSPMJG00000002835) #32	GPKOW (ENSPMJG00000002833) #33	ENSPMJG00000002829 #35	FTSJ1 (ENSPMJG00000002820) #10
Passeriformes_d	ANCESTRAL SPECIES	55								ENSGT00390000015332	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00950000182827.B	ENSGT01030000234564.a.a.b.a #11	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657.k #32	ENSGT00940000155657.l #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35	ENSGT00730000111146 #10
Passeriformes_g	ANCESTRAL SPECIES	69								ENSGT00390000015332	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00950000182827.B	ENSGT01030000234564.a.a.b.a #11	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657.k #32	ENSGT00940000155657.l #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35	ENSGT00730000111146 #10
Passeroidea	ANCESTRAL SPECIES	73								ENSGT00390000015332	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a	ENSGT00950000182827.B	ENSGT01030000234564.a.a.b.a #11	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657.k #32	ENSGT00940000155657.l #32	ENSGT00390000015154 #33	ENSGT00940000158528 #35	ENSGT00730000111146 #10
Zebra finch	MODERN SPECIES	38	ENSTGUG00000028272	ENSTGUG00000023922	ENSTGUG00000026572	ENSTGUG00000029513	ENSTGUG00000019505	ENSTGUG00000029591	ENSTGUG00000024536	ENSTGUG00000029170	ENSTGUG00000023778	ENSTGUG00000022156	ENSTGUG00000023191	ENSTGUG00000024744 #11	ENSTGUG00000028554	ENSTGUG00000019119 #21	ENSTGUG00000028864	ENSTGUG00000025548 #22	ENSTGUG00000019270 #32	WDR45 (ENSTGUG00000023573) #32	ENSTGUG00000019637 #33	PLP2 (ENSTGUG00000026260) #35	FTSJ1 (ENSTGUG00000028610) #10	ENSTGUG00000019361 #26	ENSTGUG00000025544	ENSTGUG00000020586	ENSTGUG00000027861	ENSTGUG00000025565	ENSTGUG00000027543	ENSTGUG00000029563	NRXN2 (ENSTGUG00000027499)	FRMD8 (ENSTGUG00000026403)	ENSTGUG00000027442
Neognathae_c	ANCESTRAL SPECIES	103																ENSGT00940000159563 #22	ENSGT00940000155657.l #32	ENSGT00390000015154 #33
Kakapo	MODERN SPECIES	27	ENSSHBG00005007944	UBL4A (ENSSHBG00005007963)	ENSSHBG00005007974	ENSSHBG00005008000	GATA1 (ENSSHBG00005008065) #21	ENSSHBG00005008057	PORCN (ENSSHBG00005008085) #11	SLC35A2 (ENSSHBG00005008109)	ENSSHBG00005008129	SEPHS2 (ENSSHBG00005008143)	ENSSHBG00005008159	IKBKG (ENSSHBG00005008187)	ENSSHBG00005008249	ENSSHBG00005008388	ENSSHBG00005008400	ENSSHBG00005008422 #22	WDR45 (ENSSHBG00005008450) #32	ENSSHBG00005008463 #33
Cryptodira	ANCESTRAL SPECIES	96				ENSGT00940000162821	ENSGT00890000139436.A.b	ENSGT00390000013859	ENSGT00390000003809	ENSGT00940000159855	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657 #32
Testudinoidea	ANCESTRAL SPECIES	40				ENSGT00940000162821	ENSGT00890000139436.A.b	ENSGT00390000013859	ENSGT00390000003809	ENSGT00940000159855	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657 #32	ENSGT00950000182835.c.c	ENSGT00940000162980	ENSGT00390000003348	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b.hb	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000162770.p	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00940000153629.a.b #36
Testudinidae	ANCESTRAL SPECIES	46		ENSGT00940000162821	ENSGT00890000139436.A.b	ENSGT00390000013859	ENSGT00390000003809	ENSGT00940000159855	ENSGT00720000108868 #29	ENSGT00940000155472.a.a	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657 #32	ENSGT00950000182835.c.c	ENSGT00940000162980	ENSGT00390000003348	ENSGT00940000155877	ENSGT00940000159438	ENSGT00390000012692	ENSGT00940000160145.b.hb	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000162770.p	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00940000153629.a.b #36
Goode s thornscrub tortoise	MODERN SPECIES	111															ENSGEVG00005020052	HDAC6 (ENSGEVG00005020037) #22
Abingdon island giant tortoise	MODERN SPECIES	643						ENSCABG00000015462	ENSCABG00000014703	GRIPAP1 (ENSCABG00000014673) #29	ENSCABG00000014671	PIM2 (ENSCABG00000014669)	SLC35A2 (ENSCABG00000014529)	PQBP1 (ENSCABG00000014524) #26	TIMM17B (ENSCABG00000014523) #25	CDK20 (ENSCABG00000014521)	GATA1 (ENSCABG00000014518) #21	HDAC6 (ENSCABG00000014483) #22	ENSCABG00000014472 #32	PFKFB1 (ENSCABG00000014470)	ITIH6 (ENSCABG00000014464)	FGD1 (ENSCABG00000014438)	TSR2 (ENSCABG00000014424)	WNK3 (ENSCABG00000014379)	ENSCABG00000014370
Emydidae	ANCESTRAL SPECIES	59							ENSGT00720000108868 #29	ENSGT00940000155472.a.a	ENSGT00940000158963 #27	ENSGT00940000161689	ENSGT00950000182827.B	ENSGT00950000183102.C #26	ENSGT00390000017780.e #25	ENSGT00940000159128	ENSGT00940000161156 #21	ENSGT00940000159563 #22	ENSGT00940000155657 #32	ENSGT00950000182835.c.c	ENSGT00940000162980	ENSGT00940000155877	ENSGT00940000160145.b.hb	ENSGT00530000063168.a.a.b	ENSGT00940000157847	ENSGT00940000156319	ENSGT00940000162770.p	ENSGT00530000063540.a	ENSGT00940000159912	ENSGT00940000153629.a.b #36	ENSGT00940000158528 #35	ENSGT00390000015154 #33	ENSGT00940000155170
painted turtle	MODERN SPECIES	1022							GRIPAP1 (ENSCPBG00000017481) #29	ENSCPBG00000017477	OTUD5 (ENSCPBG00000017475) #27	PIM2 (ENSCPBG00000017474)	SLC35A2 (ENSCPBG00000017464)	PQBP1 (ENSCPBG00000017461) #26	TIMM17B (ENSCPBG00000017459) #25	CDK20 (ENSCPBG00000017458)	GATA1 (ENSCPBG00000017455) #21	HDAC6 (ENSCPBG00000017452) #22	WDR45 (ENSCPBG00000017434) #32	PFKFB1 (ENSCPBG00000017423)	ITIH6 (ENSCPBG00000017418)	GNL3L (ENSCPBG00000017415)	WNK3 (ENSCPBG00000017411)	FAM120C (ENSCPBG00000017405)	ENSCPBG00000017404	PHF8 (ENSCPBG00000017403)	HUWE1 (ENSCPBG00000016914)	ENSCPBG00000016638	APEX2 (ENSCPBG00000016631)	ALAS2 (ENSCPBG00000016628)	ENSCPBG00000016621 #36	PLP2 (ENSCPBG00000016616) #35	GPKOW (ENSCPBG00000016609) #33
Anura	ANCESTRAL SPECIES	603																ENSGT00940000159563 #22	ENSGT00990000203541.b
Leishan spiny toad	MODERN SPECIES	913															ENSLLEG00000019258	HDAC6 (ENSLLEG00000019064) #22	ENSLLEG00000018965	ENSLLEG00000018919
Frog	MODERN SPECIES	8	imp4 (ENSXETG00000045525)	XB5795058 [provisional] (ENSXETG00000036260)	sft2d3 (ENSXETG00000045709)	ENSXETG00000043115	ENSXETG00000044331 #10	syce1 (ENSXETG00000041899)	ENSXETG00000042195	ENSXETG00000045103	ENSXETG00000046518 #13	myh2 (ENSXETG00000045699)	ENSXETG00000044448	slc38a5 (ENSXETG00000011939) #9	was (ENSXETG00000046239) #16	ENSXETG00000046491	ENSXETG00000045063	hdac6 (ENSXETG00000023355) #22	cxxc1 (ENSXETG00000021938)	ENSXETG00000046390	gata1 (ENSXETG00000018547) #21	ENSXETG00000042105	mbd1 (ENSXETG00000040845)	ENSXETG00000046264	ENSXETG00000045668	ENSXETG00000037593	ENSXETG00000049290	ENSXETG00000031005	ENSXETG00000021909	ENSXETG00000049034	ENSXETG00000048022	XB5856157 [provisional:endod1] (ENSXETG00000041693)	cdk16 (ENSXETG00000020815)
Coelacanth	MODERN SPECIES	1968															ENSLACG00000008938	HDAC6 (ENSLACG00000007008) #22	ENSLACG00000006622	pcsk1nl (ENSLACG00000005918)	ENSLACG00000005573	ENSLACG00000002414	ccdc115 (ENSLACG00000001038)
Actinopterygii	ANCESTRAL SPECIES	136					ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00940000155877	ENSGT01030000234549.a.a.a.b	ENSGT01030000234549.a.a.a.a.a.a	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000161383	ENSGT00940000166196	ENSGT00940000159128	ENSGT00940000166313	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT00390000002062	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000156963.a.b	ENSGT00940000155317.a.a	ENSGT01030000234648.a.b.a.b.b	ENSGT00940000160485	ENSGT00390000005780.a	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963 #27	ENSGT00940000161689
Reedfish	MODERN SPECIES	2	ccdc120b (ENSECRG00000020130)	tfe3a (ENSECRG00000020165) #30	ENSECRG00000020187	cxxc1a (ENSECRG00000020205)	ENSECRG00000007589	FGD1 (ENSECRG00000007611)	gnl3l (ENSECRG00000007644)	mecp2 (ENSECRG00000007685)	IRAK1 (ENSECRG00000007760)	ENSECRG00000007782	TMEM187 (ENSECRG00000007796)	HCFC1 (ENSECRG00000007822)	si:dkey-13a21.4 (ENSECRG00000007855)	cdk20 (ENSECRG00000007865)	gata1a (ENSECRG00000007886)	ENSECRG00000007908 #22	ENSECRG00000007966	tsr2 (ENSECRG00000008057)	CDK16 (ENSECRG00000008102)	comtb (ENSECRG00000008178)	abt1 (ENSECRG00000008206)	ENSECRG00000008237	ENSECRG00000008328	ENSECRG00000008668	zgc:86609 (ENSECRG00000008697)	uxt (ENSECRG00000008724)	ENSECRG00000008741	ENSECRG00000008752	otud5a (ENSECRG00000008757) #27	pim2 (ENSECRG00000008775)	pim2 (ENSECRG00000008783)
Neopterygii	ANCESTRAL SPECIES	131					ENSGT00950000183005.a.a	ENSGT00730000111044	ENSGT00940000155877	ENSGT01030000234549.a.a.a.b	ENSGT01030000234549.a.a.a.a.a.a	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000161383	ENSGT00940000166196	ENSGT00940000159128	ENSGT00940000166313	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT00390000002062	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000156963.a.b	ENSGT00940000155317.a.a	ENSGT01030000234648.a.b.a.b.b	ENSGT00940000160485	ENSGT00390000005780.a	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963 #27	ENSGT00940000161689
Spotted gar	MODERN SPECIES	647	cxxc1a (ENSLOCG00000014684)	zgc:113363 (ENSLOCG00000014689)	tfe3a (ENSLOCG00000014691) #30	FGD1 (ENSLOCG00000014698)	gnl3l (ENSLOCG00000014702)	ENSLOCG00000014710	opn1lw1 (ENSLOCG00000014714)	opn1sw2 (ENSLOCG00000014721)	mecp2 (ENSLOCG00000014725)	IRAK1 (ENSLOCG00000014730)	TMEM187 (ENSLOCG00000017979)	HCFC1 (ENSLOCG00000014733)	si:dkey-13a21.4 (ENSLOCG00000014749)	cdk20 (ENSLOCG00000014752)	gata1a (ENSLOCG00000014759)	ENSLOCG00000014762 #22	ENSLOCG00000014763	pcsk1nl (ENSLOCG00000014765)	PLP2 (ENSLOCG00000014766) #35	sypb (ENSLOCG00000014767) #37	ENSLOCG00000014770	ENSLOCG00000014772	timm17b (ENSLOCG00000014774) #25	pqbp1 (ENSLOCG00000014775) #26	gpkow (ENSLOCG00000014776) #33	ENSLOCG00000014780	ENSLOCG00000014784	WNK3 (ENSLOCG00000014785)	FAM120C (ENSLOCG00000014788)	ENSLOCG00000014792	ENSLOCG00000014794
Osteoglossocephalai	ANCESTRAL SPECIES	116	ENSGT00940000155317.a.a	ENSGT00940000156963.a.b	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000161383.d.b	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000166169	ENSGT00390000008631.b #31	ENSGT00390000017780.e #25	ENSGT00950000183102.C #26	ENSGT00390000015154 #33	ENSGT00940000164755.D	ENSGT00940000159667.b	ENSGT00940000164196.d
Osteoglossiformes	ANCESTRAL SPECIES	147	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00730000111044	ENSGT00940000155480.d.m	ENSGT00940000158685	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000161383.d.b	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663
P. kingsleyae	MODERN SPECIES	301	SRPK3 (ENSPKIG00000023691)	PLXNB3 (ENSPKIG00000023729)	abcd1 (ENSPKIG00000023779)	ENSPKIG00000023796	ENSPKIG00000023805	cxxc1a (ENSPKIG00000023833)	ENSPKIG00000023877	tfe3a (ENSPKIG00000023885) #30	FGD1 (ENSPKIG00000023905)	ENSPKIG00000023954	mecp2 (ENSPKIG00000023979)	ENSPKIG00000023994	ENSPKIG00000024006	cdk20 (ENSPKIG00000024030)	ENSPKIG00000024047	HDAC6 (ENSPKIG00000024072) #22	ENSPKIG00000024113	pcsk1nl (ENSPKIG00000024117)
Asian bonytongue	MODERN SPECIES		PLXNB3 (ENSSFOG00015002059)	abcd1 (ENSSFOG00015001977)	ENSSFOG00015030516	ENSSFOG00015026264	ENSSFOG00015001950	cxxc1a (ENSSFOG00015001940)	zgc:113363 (ENSSFOG00015032088)	tfe3a (ENSSFOG00015001934) #30	FGD1 (ENSSFOG00015001880)	ENSSFOG00015001848	mecp2 (ENSSFOG00015029955)	IRAK1 (ENSSFOG00015001632)	HCFC1 (ENSSFOG00015001349)	cdk20 (ENSSFOG00015001339)	ENSSFOG00015001334	HDAC6 (ENSSFOG00015001196) #22	ENSSFOG00015001171	PRICKLE3 (ENSSFOG00015001147) #36	plp2a (ENSSFOG00015001138) #35	SYP (ENSSFOG00015001132) #37	cacna1fb (ENSSFOG00015000557)	timm17b (ENSSFOG00015000513) #25	ENSSFOG00015000499	IQSEC2 (ENSSFOG00015000482)	kdm5c (ENSSFOG00015000299)	PDZD4 (ENSSFOG00015000289)	ENSSFOG00015000272	porcnl (ENSSFOG00015000133) #11	ENSSFOG00015031785	wdr13 (ENSSFOG00015020215) #15	suv39h1b (ENSSFOG00015020184) #17
Clupeocephala	ANCESTRAL SPECIES	149	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT00950000182827.B	ENSGT00940000163427.c	ENSGT00940000158963.b.b #27	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000002062	ENSGT00940000161383.d.b	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT00940000169444	ENSGT00940000154102.b.a.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g	ENSGT00390000012692	ENSGT00940000156963.a.b	ENSGT00940000155317.a.a	ENSGT01030000234648.a.b.a.b.a.b
Otomorpha	ANCESTRAL SPECIES	83	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000169444	ENSGT00730000111044	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000159667.a	ENSGT00950000183062.a.b.b.b	ENSGT01030000234564.a.a.b.a.e #11	ENSGT00940000166825	ENSGT00940000160063.g.a #17	ENSGT00890000139436.A.b.a	ENSGT00940000165955.a	ENSGT00940000165056.a	ENSGT00730000110895.b.b.c #16	ENSGT00940000166636	ENSGT00390000003809
Clupeiformes	ANCESTRAL SPECIES	80	ENSGT00940000156963.a.b	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000169444	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b.v	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000164755.C	ENSGT00950000183062.a.b.b.b	ENSGT01030000234564.a.a.b.a.e #11	ENSGT00940000166825	ENSGT00940000160063.g.a #17	ENSGT00890000139436.A.b.a	ENSGT00940000165955.a	ENSGT00940000165056.a	ENSGT00730000110895.b.b.c #16	ENSGT00940000166636	ENSGT00390000003809
Atlantic herring	MODERN SPECIES	20	USP11 (ENSCHAG00000001346)	grm6a (ENSCHAG00000003869)	abt1 (ENSCHAG00000006011)	comta (ENSCHAG00000006027)	CDK16 (ENSCHAG00000006163)	tsr2 (ENSCHAG00000010385)	SRPK3 (ENSCHAG00000010403)	PLXNB3 (ENSCHAG00000010819)	abcd1 (ENSCHAG00000014730)	ENSCHAG00000015450	FGD1 (ENSCHAG00000015518)	tfe3a (ENSCHAG00000015756) #30	hcfc1b (ENSCHAG00000015879)	cdk20 (ENSCHAG00000016474)	ENSCHAG00000016693	HDAC6 (ENSCHAG00000016727) #22	ENSCHAG00000018158	ENSCHAG00000018192	ENSCHAG00000018208	plp2a (ENSCHAG00000018231) #35	sypa (ENSCHAG00000018272) #37	cacna1fb (ENSCHAG00000018435)	ENSCHAG00000023464	ENSCHAG00000023470	ENSCHAG00000023482	IQSEC2 (ENSCHAG00000023492)	PDZD4 (ENSCHAG00000023531)	porcnl (ENSCHAG00000023537) #11	ENSCHAG00000023563	suv39h1a (ENSCHAG00000023568) #17	gpr173 (ENSCHAG00000023579)
Denticle herring	MODERN SPECIES	1	tsr2 (ENSDCDG00000021609)	SRPK3 (ENSDCDG00000020351)	PLXNB3 (ENSDCDG00000015001)	abcd1 (ENSDCDG00000014869)	ENSDCDG00000014860	mbd1a (ENSDCDG00000014854)	tfe3a (ENSDCDG00000014843) #30	ENSDCDG00000014841	FGD1 (ENSDCDG00000014316)	ENSDCDG00000014265	mecp2 (ENSDCDG00000013979)	ENSDCDG00000013911	hcfc1b (ENSDCDG00000013119)	cdk20 (ENSDCDG00000013012)	ENSDCDG00000012998	HDAC6 (ENSDCDG00000008185) #22	ENSDCDG00000007895	sypa (ENSDCDG00000007864) #37	cacna1fb (ENSDCDG00000003632)	ENSDCDG00000003340	ENSDCDG00000003333	IQSEC2 (ENSDCDG00000003279)	PDZD4 (ENSDCDG00000003239)	porcnl (ENSDCDG00000003101) #11	suv39h1a (ENSDCDG00000031494) #17	gpr173 (ENSDCDG00000031490)	ENSDCDG00000031488	sema3gb (ENSDCDG00000031324)	wasb (ENSDCDG00000031292) #16	slc38a5b (ENSDCDG00000030450)	ccdc22 (ENSDCDG00000030414)
Otophysi	ANCESTRAL SPECIES	127	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000002062	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT01030000235233	ENSGT00940000163873.c.a	ENSGT00940000155615.i.b	ENSGT00940000154583.f	ENSGT00390000017131	ENSGT00940000161090.B.c.b.b.b	ENSGT01100000263573.b.b	ENSGT00390000003114.e.a.a	ENSGT00940000153634.a #15
Characiphysae	ANCESTRAL SPECIES	41	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000169444	ENSGT00730000111044	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT01030000235233	ENSGT00940000163873.c.a	ENSGT00940000155615.i.b	ENSGT00940000154583.f	ENSGT00390000017131	ENSGT00940000161090.B.c.b.b.b
Channel catfish	MODERN SPECIES	24	PLXNB3 (ENSIPUG00000012302)	ABCD1 (ENSIPUG00000012423)	CCDC120 (ENSIPUG00000012472)	mbd1a (ENSIPUG00000012547)	CXXC1 (ENSIPUG00000012610)	ntpcr (ENSIPUG00000012672)	zgc:113363 (ENSIPUG00000012710)	tfe3a (ENSIPUG00000012922) #30	FGD1 (ENSIPUG00000012986)	ENSIPUG00000013003	mecp2 (ENSIPUG00000013019)	irak1 (ENSIPUG00000013038)	hcfc1 (ENSIPUG00000013092)	cdk20 (ENSIPUG00000013183)	ENSIPUG00000013221	Hdac6 (ENSIPUG00000013277) #22	ENSIPUG00000013393	pcsk1nl (ENSIPUG00000013403)	ssuh2rs1 (ENSIPUG00000013410)	ENSIPUG00000013430	grip2a (ENSIPUG00000013453)	slc6a6a (ENSIPUG00000013496)	abtb1 (ENSIPUG00000013593)	ENSIPUG00000013621	ENSIPUG00000013643	rexo1 (ENSIPUG00000013683)	zgc:101100 (ENSIPUG00000013719)	Csnk1g2 (ENSIPUG00000013749)	mfsd12 (ENSIPUG00000013821)	nfic (ENSIPUG00000013859)	dohh (ENSIPUG00000013906)
Characiphysae_b	ANCESTRAL SPECIES	134	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000169444	ENSGT00730000111044	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT01030000235233	ENSGT00940000163873.c.a	ENSGT00940000155615.i.b	ENSGT00940000154583.f	ENSGT00390000017131	ENSGT00940000161090.B.c.b.b.b
Electric eel	MODERN SPECIES	111		ENSEEEG00000003718	ENSEEEG00000003712	abcd1 (ENSEEEG00000003708)	ENSEEEG00000003704	cxxc1a (ENSEEEG00000003597)	zgc:113363 (ENSEEEG00000003590)	tfe3a (ENSEEEG00000003588) #30	FGD1 (ENSEEEG00000003585)	ENSEEEG00000003583	mecp2 (ENSEEEG00000003570)	ENSEEEG00000003563	hcfc1b (ENSEEEG00000003562)	cdk20 (ENSEEEG00000003560)	ENSEEEG00000003556	ENSEEEG00000003118 #22	ENSEEEG00000003112	ssuh2rs1 (ENSEEEG00000003111)	grip2a (ENSEEEG00000003094)	slc6a6a (ENSEEEG00000001044)	ABTB1 (ENSEEEG00000000901)	ENSEEEG00000000872	ENSEEEG00000000864	mad2l2 (ENSEEEG00000000859)	ENSEEEG00000000855	lrrc47 (ENSEEEG00000000853)	CEP104 (ENSEEEG00000000848)	b3gnt7l (ENSEEEG00000000842)	ENSEEEG00000000839	dffb (ENSEEEG00000000834)	ifrd2 (ENSEEEG00000000655)
Characoidei	ANCESTRAL SPECIES	150	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000169444	ENSGT00730000111044	ENSGT00940000158685	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT01030000235233	ENSGT00940000163873.c.a	ENSGT00940000155615.i.b	ENSGT00940000154583.f	ENSGT00390000017131	ENSGT00940000161090.B.c.b.b.b	ENSGT00940000160485	ENSGT00390000005780.a	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.b.b #27	ENSGT00940000163427.c
Red-bellied piranha	MODERN SPECIES	358	SRPK3 (ENSPNAG00000004866)	PLXNB3 (ENSPNAG00000024448)	abcd1 (ENSPNAG00000024508)	ENSPNAG00000003831	mbd1a (ENSPNAG00000024566)	cxxc1a (ENSPNAG00000006542)	zgc:113363 (ENSPNAG00000005751)	tfe3a (ENSPNAG00000024609) #30	FGD1 (ENSPNAG00000005886)	ENSPNAG00000024681	mecp2 (ENSPNAG00000024721)	ENSPNAG00000024736	hcfc1b (ENSPNAG00000024755)	cdk20 (ENSPNAG00000005669)	ENSPNAG00000024820	ENSPNAG00000006252 #22	ENSPNAG00000024874
Mexicana tetra	MODERN SPECIES	21	ENSAMXG00000014027	si:ch211-150o23.2 (ENSAMXG00000032654)	soat1 (ENSAMXG00000039298)	SLC44A5 (ENSAMXG00000013985)	plin3 (ENSAMXG00000013969)	zgc:77486 (ENSAMXG00000013959)	ENSAMXG00000036188	ENSAMXG00000009341	FGD1 (ENSAMXG00000016993)	ENSAMXG00000030723	mecp2 (ENSAMXG00000039189)	ENSAMXG00000039681	hcfc1b (ENSAMXG00000006488)	cdk20 (ENSAMXG00000017068)	ENSAMXG00000017091	HDAC6 (ENSAMXG00000017118) #22	ENSAMXG00000017157	pcsk1nl (ENSAMXG00000017161)	ENSAMXG00000043920	ssuh2rs1 (ENSAMXG00000017171)	grip2a (ENSAMXG00000036235)	slc6a6a (ENSAMXG00000038150)	ABTB1 (ENSAMXG00000040273)	USP11 (ENSAMXG00000017309)	zgc:86609 (ENSAMXG00000040575)	uxt (ENSAMXG00000039548)	ENSAMXG00000017384	ENSAMXG00000025140	otud5a (ENSAMXG00000038113) #27	pim2 (ENSAMXG00000032454)	slc35a2 (ENSAMXG00000017408)
Cyprinoidei	ANCESTRAL SPECIES	32	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00390000005780.a	ENSGT00940000160485	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000002062	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT01030000235233	ENSGT00940000163873.c.a.o	ENSGT00940000155615.i.b	ENSGT00940000154583.f	ENSGT00390000017131	ENSGT00940000161090.B.c.b.b.b	ENSGT01100000263573.b.b	ENSGT00390000003114.e.a.a	ENSGT00940000158414	ENSGT00980000198631	ENSGT00940000153634.a #15	ENSGT00390000006784	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.a.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	134	ENSGT00940000157877.b.g.b	ENSGT01020000230394.e.a.a.b.a.b.d	ENSGT00950000182955.a.b.a.i	ENSGT00940000154102.b.a.b.e	ENSGT00940000169444	ENSGT00730000111044.s	ENSGT00940000158685.t.b	ENSGT00940000157503.i.a.d #30	ENSGT00940000159438.hb.b.a	ENSGT00390000003348	ENSGT00530000063687.b.b.b.t	ENSGT00940000160502.j	ENSGT00940000167532.b	ENSGT00940000159128.b	ENSGT00940000166313.b.a	ENSGT00940000159563.a #22	ENSGT01030000235233.a.a.b	ENSGT01030000235233.b	ENSGT00940000163873.c.a.o.a.b	ENSGT00940000155615.i.b.e	ENSGT00940000154583.f.b	ENSGT00390000017131.b	ENSGT00940000161090.B.c.b.b.b.a	ENSGT00390000003114.e.a.a	ENSGT00940000158414.h.a	ENSGT00980000198631	ENSGT00940000153634.a.l #15	ENSGT00390000006784.f	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.b.a.a.a.b.a	ENSGT00940000156208.i.f.e	ENSGT00940000161685.A.a.c.e
Cyprininae_a	ANCESTRAL SPECIES	109			ENSGT01020000230394.e.a.a.b.a.b.d	ENSGT00950000182955.a.b.a.i	ENSGT00940000154102.b.a.b.e	ENSGT00730000111044.s	ENSGT00940000158685.t.b	ENSGT00940000157503.i.a.d #30	ENSGT00940000159438.hb.b.a	ENSGT00390000003348	ENSGT00530000063687.b.b.b.t	ENSGT00940000160502.j	ENSGT00940000167532.b	ENSGT00940000159128.b	ENSGT00940000166313.b.a	ENSGT00940000159563.a #22	ENSGT00990000203541.b.a	ENSGT00600000085663	ENSGT01030000235233.a.a.a	ENSGT00940000163873.c.a.o.a.a.b	ENSGT01100000263473.a.b.h.b	ENSGT01030000235233.a.a.b	ENSGT01030000235233.b	ENSGT00940000163873.c.a.p	ENSGT00940000163873.c.a.o.a.b	ENSGT00940000155615.i.b.e	ENSGT00940000154583.f.b	ENSGT00390000017131.b	ENSGT00940000161090.B.c.b.b.b.a	ENSGT00390000003114.e.a.a	ENSGT00940000158414.h.a
Common carp reference	MODERN SPECIES	23	comta (ENSCCRG00000052635)	ENSCCRG00000069480	SRPK3 (ENSCCRG00000080303)	ENSCCRG00000030157	abcd1 (ENSCCRG00000025744)	ENSCCRG00000025735	cxxc1a (ENSCCRG00000025486)	zgc:113363 (ENSCCRG00000025731)	tfe3a (ENSCCRG00000025498) #30	ENSCCRG00000021342	ENSCCRG00000021358	mecp2 (ENSCCRG00000062551)	ENSCCRG00000021365	hcfc1b (ENSCCRG00000002147)	cdk20 (ENSCCRG00000002150)	ENSCCRG00000040806 #22	ENSCCRG00000050111	pcsk1nl (ENSCCRG00000072367)	ENSCCRG00000002929	ENSCCRG00000043518	ENSCCRG00000071338	ENSCCRG00000067660	ENSCCRG00000029562	ENSCCRG00000079400	ENSCCRG00000020727	ENSCCRG00000045171	ssuh2rs1 (ENSCCRG00000043512)	grip2a (ENSCCRG00000011004)	slc6a6a (ENSCCRG00000046825)	ENSCCRG00000010828	ENSCCRG00000010795
Golden-line barbel	MODERN SPECIES	441			ENSSGRG00000020509	abcd1 (ENSSGRG00000020483)	ENSSGRG00000020482	zgc:113363 (ENSSGRG00000020479)	ENSSGRG00000020478 #30	FGD1 (ENSSGRG00000020400)	ENSSGRG00000020398	mecp2 (ENSSGRG00000020397)	ENSSGRG00000020396	hcfc1b (ENSSGRG00000019974)	cdk20 (ENSSGRG00000019947)	cdk20 (ENSSGRG00000019946)	ENSSGRG00000019938	HDAC6 (ENSSGRG00000019867) #22	ENSSGRG00000019863	ENSSGRG00000019860	ENSSGRG00000019859	ENSSGRG00000019858	ssuh2rs1 (ENSSGRG00000019857)	grip2a (ENSSGRG00000019185)	slc6a6a (ENSSGRG00000018659)	ABTB1 (ENSSGRG00000018579)	ENSSGRG00000018565	gpd1a (ENSSGRG00000018002)	asic1a (ENSSGRG00000017998)	wdr13 (ENSSGRG00000017828) #15	asb6 (ENSSGRG00000017821)	ENSSGRG00000017819	neflb (ENSSGRG00000017815)
Goldfish	MODERN SPECIES	48	ENSCARG00000011771	abcd1 (ENSCARG00000012822)	ENSCARG00000013152	mbd1a (ENSCARG00000013159)	cxxc1a (ENSCARG00000013188)	zgc:113363 (ENSCARG00000013546)	tfe3a (ENSCARG00000013560) #30	FGD1 (ENSCARG00000013577)	ENSCARG00000013801	mecp2 (ENSCARG00000013811)	ENSCARG00000013822	hcfc1b (ENSCARG00000013922)	ENSCARG00000014540	cdk20 (ENSCARG00000014545)	ENSCARG00000014548	HDAC6 (ENSCARG00000014612) #22	ENSCARG00000016745	ENSCARG00000016762	ENSCARG00000016805	ssuh2rs1 (ENSCARG00000016820)	grip2a (ENSCARG00000016845)	slc6a6a (ENSCARG00000016876)	ABTB1 (ENSCARG00000016926)	ENSCARG00000017151	gpd1a (ENSCARG00000017158)	asic1a (ENSCARG00000017188)	ENSCARG00000017235	wdr13 (ENSCARG00000017242) #15	ENSCARG00000017306	ENSCARG00000017328	neflb (ENSCARG00000017341)
Cyprininae	ANCESTRAL SPECIES	136										ENSGT00940000159438.hb.b.b	ENSGT00530000063687.b.b.b.s	ENSGT00940000160502.i	ENSGT00940000167532.a.a	ENSGT00940000159128.a	ENSGT00940000166313.b.b	ENSGT00940000159563.b #22	ENSGT00990000203541.b.b	ENSGT00950000182864.a.b.b.a.a.a.a.b	ENSGT00990000203541.b.a	ENSGT00600000085663	ENSGT01030000235233.a.a.a	ENSGT00940000163873.c.a.o.a.a.b	ENSGT00940000155615.i.b.f	ENSGT00940000154583.f.a	ENSGT00390000017131.a	ENSGT00940000161090.B.c.b.b.b.b	ENSGT01100000263573.b.b	ENSGT00940000158414.h.b	ENSGT00940000153634.a.k #15	ENSGT00390000006784.e	ENSGT00940000156208.i.f.f
Cyprininae_a	ANCESTRAL SPECIES	111	ENSGT00940000157877.b.g.a	ENSGT01020000230394.e.a.a.b.a.b.c	ENSGT00950000182955.a.b.a.j	ENSGT00940000154102.b.a.b.f	ENSGT00940000169444	ENSGT00730000111044.t	ENSGT00940000158685.t.a	ENSGT00940000157503.i.a.c #30	ENSGT00940000159438.hb.a	ENSGT00940000159438.hb.b.b	ENSGT00530000063687.b.b.b.s	ENSGT00940000160502.i	ENSGT00940000167532.a.b	ENSGT00940000159128.a	ENSGT00940000166313.b.b	ENSGT00940000159563.b #22	ENSGT00990000203541.b.b
Common carp reference	MODERN SPECIES	17	comta (ENSCCRG00000025764)	ENSCCRG00000067741	SRPK3 (ENSCCRG00000025752)	ENSCCRG00000030238	abcd1 (ENSCCRG00000035216)	ENSCCRG00000035218	mbd1a (ENSCCRG00000065415)	cxxc1a (ENSCCRG00000034737)	zgc:113363 (ENSCCRG00000034733)	tfe3a (ENSCCRG00000034728) #30	ENSCCRG00000002107	mecp2 (ENSCCRG00000076063)	ENSCCRG00000002126	cdk20 (ENSCCRG00000010099)	ENSCCRG00000035394	ENSCCRG00000000990 #22	ENSCCRG00000000986	ENSCCRG00000047276	pym1 (ENSCCRG00000004095)	ENSCCRG00000004092	ENSCCRG00000060878	trim36 (ENSCCRG00000004081)	pggt1b (ENSCCRG00000035455)	ENSCCRG00000074020	fem1c (ENSCCRG00000010209)	ENSCCRG00000062246	COMMD10 (ENSCCRG00000033470)	ENSCCRG00000045985	DMXL1 (ENSCCRG00000014874)	prr16 (ENSCCRG00000077774)	ENSCCRG00000020634
Golden-line barbel	MODERN SPECIES	63	CDK16 (ENSSGRG00000035043)	tsr2 (ENSSGRG00000035040)	SRPK3 (ENSSGRG00000034455)	PLXNB3 (ENSSGRG00000033604)	abcd1 (ENSSGRG00000033492)	ENSSGRG00000033490	cxxc1a (ENSSGRG00000033487)	zgc:113363 (ENSSGRG00000033484)	tfe3a (ENSSGRG00000033483) #30	FGD1 (ENSSGRG00000033479)	mecp2 (ENSSGRG00000033460)	ENSSGRG00000033459	hcfc1b (ENSSGRG00000033403)	cdk20 (ENSSGRG00000033396)	ENSSGRG00000033395	ENSSGRG00000033331 #22	ENSSGRG00000033330	ENSSGRG00000033328	ENSSGRG00000033327	ssuh2rs1 (ENSSGRG00000033326)	grip2a (ENSSGRG00000033196)	slc6a6a (ENSSGRG00000033068)	ABTB1 (ENSSGRG00000033061)	gpd1a (ENSSGRG00000033057)	asic1a (ENSSGRG00000033039)	wdr13 (ENSSGRG00000032820) #15	asb6 (ENSSGRG00000032817)	ENSSGRG00000032815	dock5 (ENSSGRG00000032764)	ENSSGRG00000032754	vsig8b (ENSSGRG00000032753)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3194											mecp2 (ENSCARG00000057153)	ENSCARG00000057159	hcfc1b (ENSCARG00000057360)	cdk20 (ENSCARG00000057773)	ENSCARG00000057829	HDAC6 (ENSCARG00000057856) #22	ENSCARG00000058395	ENSCARG00000058415	ssuh2rs1 (ENSCARG00000058452)	grip2a (ENSCARG00000058653)	slc6a6a (ENSCARG00000058846)	ABTB1 (ENSCARG00000059056)	ENSCARG00000059076	ENSCARG00000059104	asic1a (ENSCARG00000059119)
Goldfish	MODERN SPECIES	2915											mecp2 (ENSCARG00000062762)	ENSCARG00000062766	hcfc1b (ENSCARG00000062849)	cdk20 (ENSCARG00000063795)	ENSCARG00000063879	HDAC6 (ENSCARG00000063910) #22	ENSCARG00000064224	ENSCARG00000064252	ssuh2rs1 (ENSCARG00000064278)	ENSCARG00000064345	grip2a (ENSCARG00000064349)	slc6a6a (ENSCARG00000064389)	ABTB1 (ENSCARG00000064569)	ENSCARG00000064595	ENSCARG00000064623	asic1a (ENSCARG00000064626)	wdr13 (ENSCARG00000064635) #15	asb6 (ENSCARG00000064690)	neflb (ENSCARG00000064702)	nefmb (ENSCARG00000064721)
Zebrafish	MODERN SPECIES	23	tsr2 (ENSDARG00000005772)	SRPK3 (ENSDARG00000005916)	ENSDARG00000032990	abcd1 (ENSDARG00000074876)	ENSDARG00000012449	mbd1a (ENSDARG00000101205)	cxxc1a (ENSDARG00000101996)	zgc:113363 (ENSDARG00000101206)	tfe3a (ENSDARG00000098903) #30	FGD1 (ENSDARG00000100402)	mecp2 (ENSDARG00000014218)	ENSDARG00000025949	hcfc1b (ENSDARG00000012519)	cdk20 (ENSDARG00000003867)	ENSDARG00000059130	HDAC6 (ENSDARG00000008384) #22	ENSDARG00000076943	pcsk1nl (ENSDARG00000076170)	selenoh (ENSDARG00000093022)	ssuh2rs1 (ENSDARG00000063292)	grip2a (ENSDARG00000087187)	slc6a6a (ENSDARG00000012534)	ABTB1 (ENSDARG00000063354)	ENSDARG00000034836	ENSDARG00000091859	gpd1a (ENSDARG00000043701)	asic1a (ENSDARG00000008329)	si:ch211-255g12.6 (ENSDARG00000094310)	wdr13 (ENSDARG00000022974) #15	asb6 (ENSDARG00000007125)	ENSDARG00000069627
Euteleosteomorpha	ANCESTRAL SPECIES	144	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000169444	ENSGT00730000111044	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663
Protacanthopterygii	ANCESTRAL SPECIES	168		ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000169444	ENSGT00730000111044	ENSGT00940000157503.i.a #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000161383.d.b	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000159667.a	ENSGT00950000183062.a.b.b.b
Northern pike	MODERN SPECIES	11	ENSELUG00000033316	ENSELUG00000000854	abcd1 (ENSELUG00000019257)	ENSELUG00000019198	ENSELUG00000033414	cxxc1a (ENSELUG00000001459)	zgc:113363 (ENSELUG00000019149)	tfe3a (ENSELUG00000019126) #30	FGD1 (ENSELUG00000019088)	ENSELUG00000019047	mecp2 (ENSELUG00000019038)	IRAK1 (ENSELUG00000019026)	HCFC1 (ENSELUG00000019004)	cdk20 (ENSELUG00000018935)	ENSELUG00000018811	HDAC6 (ENSELUG00000018637) #22	ENSELUG00000018589	ENSELUG00000027086 #35	sypa (ENSELUG00000018534) #37	plp2 (ENSELUG00000018563) #35	sypa (ENSELUG00000018525) #37	cacna1fb (ENSELUG00000018501)	ENSELUG00000029702	IQSEC2 (ENSELUG00000018384)	PDZD4 (ENSELUG00000018376)	cry3a (ENSELUG00000018359)	ENSELUG00000018321	ENSELUG00000029807	NPBWR2 (ENSELUG00000018281)	ENSELUG00000018272	oprl1 (ENSELUG00000018241)
Salmoninae	ANCESTRAL SPECIES	516			ENSGT00940000161969.q	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b.a	ENSGT00940000169444	ENSGT00940000158685.ib	ENSGT00940000157503.i.a.f #30	ENSGT00940000159438.db.a.b	ENSGT00390000003348	ENSGT00530000063687.b.b.b.q	ENSGT00940000161383.d.b.a.b	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.g.a #37	ENSGT00940000159855	ENSGT00940000159667.a.e	ENSGT00950000183062.a.b.b.b
Huchen	DUPLICATION
Huchen	MODERN SPECIES	8945																ENSHHUG00000002271 #22
Huchen	MODERN SPECIES	5767															cdk20 (ENSHHUG00000033999)	ENSHHUG00000034018 #22
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000160369.l	ENSGT00940000159748	ENSGT00940000161969.q	ENSGT01020000230394.e.a.a.b.a.b.e	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b.a	ENSGT00940000169444	ENSGT00940000158685.ib	ENSGT00940000157503.i.a.f #30	ENSGT00940000159438.db.a.b	ENSGT00390000003348	ENSGT00530000063687.b.b.b.q	ENSGT00940000161383.d.b.a.b	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.g.a #37	ENSGT00940000159855	ENSGT00940000159667.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00390000006349	ENSGT00940000163127.c	ENSGT00940000160661.e	ENSGT00940000155393.d.sb.a.b	ENSGT00940000159974.f	ENSGT00940000156694.f.a	ENSGT01070000253766.B.f.a.f.a	ENSGT00400000022086.b.a.a.j.a	ENSGT00390000017515.e.b	ENSGT00940000156537.y.b
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000165405.i.a.c	ENSGT00940000165571	ENSGT00940000159748	ENSGT00940000161969.q	ENSGT01020000230394.e.a.a.b.a.b.e	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b.a	ENSGT00940000169444	ENSGT00940000158685.ib	ENSGT00940000157503.i.a.f #30	ENSGT00940000159438.db.a.b	ENSGT00390000003348	ENSGT00530000063687.b.b.b.q	ENSGT00940000161383.d.b.a.b	ENSGT00940000159128	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.g.a #37	ENSGT00940000159855	ENSGT00940000159667.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00390000006349	ENSGT00940000163127.c	ENSGT00940000160661.e	ENSGT00940000155393.d.sb.a.b	ENSGT00940000159974.f	ENSGT00940000156694.f.a	ENSGT01070000253766.B.f.a.f.b.a	ENSGT00400000022086.b.a.a.j.a	ENSGT00390000017515.e.b	ENSGT00940000156537.y.b
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000050570	ENSOMYG00000062107	ENSOMYG00000005600	ENSOMYG00000005652	ENSOMYG00000071167	ENSOMYG00000048100	ENSOMYG00000055007	abcd1 (ENSOMYG00000005141)	ENSOMYG00000058619	tfe3a (ENSOMYG00000061427) #30	ENSOMYG00000053748	ENSOMYG00000004820	mecp2 (ENSOMYG00000004898)	ENSOMYG00000004957	cdk20 (ENSOMYG00000005019)	ENSOMYG00000052768 #22	ENSOMYG00000067666	ENSOMYG00000005037 #37	cacna1fb (ENSOMYG00000072680)	ENSOMYG00000077797	ENSOMYG00000053887	ENSOMYG00000064280	ENSOMYG00000069858	ENSOMYG00000064429	ENSOMYG00000074386	ENSOMYG00000062665	ENSOMYG00000005062	ENSOMYG00000048163	ENSOMYG00000017337	oprl1 (ENSOMYG00000071445)	ENSOMYG00000069335
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000158152.a.b	ENSGT00940000165405.i.a.c	ENSGT00940000165571	ENSGT00940000161969.q	ENSGT01020000230394.e.a.a.b.a.b.e	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b.a	ENSGT00940000169444	ENSGT00940000158685.ib	ENSGT00940000157503.i.a.f #30	ENSGT00940000159438.db.a.b	ENSGT00390000003348	ENSGT00530000063687.b.b.b.q	ENSGT00940000161383.d.b.a.b	ENSGT00940000159128	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.g.a #37	ENSGT00940000159855	ENSGT00940000159667.a.e	ENSGT00950000183062.a.b.b.b	ENSGT00390000006349	ENSGT00940000163127.c	ENSGT00940000160661.e	ENSGT00940000155393.d.sb.a.a	ENSGT00940000159974.f	ENSGT00940000156694.f.a	ENSGT01070000253766.B.f.a.f.b.a	ENSGT00400000022086.b.a.a.j.a	ENSGT00390000017515.e.b	ENSGT00940000156537.y.b
Chinook salmon	MODERN SPECIES	436																ENSOTSG00005031626 #22	sypa (ENSOTSG00005031616) #37
Coho salmon	MODERN SPECIES	8	ENSOKIG00005009327	ENSOKIG00005009325	ENSOKIG00005009315	tktb (ENSOKIG00005009111)	ENSOKIG00005007380	abcd1 (ENSOKIG00005006775)	ENSOKIG00005006718	ENSOKIG00005006680	zgc:113363 (ENSOKIG00005006669)	tfe3a (ENSOKIG00005006585) #30	FGD1 (ENSOKIG00005006502)	ENSOKIG00005006475	mecp2 (ENSOKIG00005006465)	HCFC1 (ENSOKIG00005006428)	cdk20 (ENSOKIG00005006317)	HDAC6 (ENSOKIG00005005315) #22	ENSOKIG00005005253	sypa (ENSOKIG00005005240) #37	ENSOKIG00005005227	IQSEC2 (ENSOKIG00005005217)	PDZD4 (ENSOKIG00005005201)	ENSOKIG00005005190	NPBWR2 (ENSOKIG00005005180)	ENSOKIG00005005174	ENSOKIG00005005160	ENSOKIG00005005135	ENSOKIG00005005129	tcea2 (ENSOKIG00005005113)	ENSOKIG00005005083	xkr7b (ENSOKIG00005005070)	ENSOKIG00005005047
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000160369.l.a	ENSGT00940000159748	ENSGT00940000161969.q	ENSGT01020000230394.e.a.a.b.a.b.e	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b.a	ENSGT00940000169444	ENSGT00940000158685.ib	ENSGT00940000157503.i.a.f #30	ENSGT00940000159438.db.b	ENSGT00390000003348	ENSGT00530000063687.b.b.b.q	ENSGT00940000161383.d.b.a.b	ENSGT00940000167532	ENSGT00940000159128	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.g.a #37	ENSGT00940000159855	ENSGT00950000183062.a.b.b.b	ENSGT00390000006349	ENSGT00940000163127.c	ENSGT00940000160661.e	ENSGT00940000155393.d.tb	ENSGT00940000159974.f	ENSGT00940000156694.f.a	ENSGT01070000253766.B.f.a.f.a	ENSGT00400000022086.b.a.a.j.a	ENSGT00390000017515.f	ENSGT00390000017515.e.b	ENSGT00940000156537.y.b
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000095322	ENSSSAG00000106860	abcd1 (ENSSSAG00000047976)	ENSSSAG00000048040	ENSSSAG00000048105	ENSSSAG00000106351	zgc:113363 (ENSSSAG00000081927)	ENSSSAG00000084733	tfe3a (ENSSSAG00000056524) #30	ENSSSAG00000116135	ENSSSAG00000085513	ENSSSAG00000046323	mecp2 (ENSSSAG00000046352)	ENSSSAG00000046394	ENSSSAG00000046839	ENSSSAG00000046878 #22	ENSSSAG00000047337	syp (ENSSSAG00000047322) #37	ENSSSAG00000085576	cacna1fb (ENSSSAG00000114587)	ENSSSAG00000117982	ENSSSAG00000099619	ENSSSAG00000114077	ENSSSAG00000047352	ENSSSAG00000047427	ENSSSAG00000047923	ENSSSAG00000047940	ENSSSAG00000084524	oprl1 (ENSSSAG00000092179)	ENSSSAG00000096344	tcea2 (ENSSSAG00000046279)
Atlantic salmon	MODERN SPECIES	15	yars2 (ENSSSAG00000113904)	ENSSSAG00000064513	ENSSSAG00000119380	ENSSSAG00000064501	ENSSSAG00000112145	ENSSSAG00000098429	ENSSSAG00000064482	ENSSSAG00000099929	ENSSSAG00000101931	ENSSSAG00000064421	dennd2a (ENSSSAG00000064258)	adck2 (ENSSSAG00000064244)	ENSSSAG00000064241	ENSSSAG00000054656	ENSSSAG00000049736	ENSSSAG00000112579 #22	ENSSSAG00000049526	ENSSSAG00000104798	ENSSSAG00000041335	ENSSSAG00000085980	ENSSSAG00000039790	ENSSSAG00000110419	ENSSSAG00000114354	ENSSSAG00000039475	ENSSSAG00000026725	fgf22 (ENSSSAG00000117038)	ENSSSAG00000025551	ENSSSAG00000025343	ENSSSAG00000025124	micos13 (ENSSSAG00000105399)	hsd11b1la (ENSSSAG00000020651)
River trout	DUPLICATION
River trout	MODERN SPECIES	20	lrrc23 (ENSSTUG00000007951)	tktb (ENSSTUG00000007986)	ENSSTUG00000008731	abcd1 (ENSSTUG00000009273)	ENSSTUG00000009695	ENSSTUG00000009737	ENSSTUG00000009814	zgc:113363 (ENSSTUG00000009818)	ENSSTUG00000009827	tfe3a (ENSSTUG00000009833) #30	FGD1 (ENSSTUG00000009868)	ENSSTUG00000010152	mecp2 (ENSSTUG00000010178)	hcfc1b (ENSSTUG00000010191)	cdk20 (ENSSTUG00000010459)	ENSSTUG00000010493 #22	ENSSTUG00000010770	sypa (ENSSTUG00000010775) #37	ENSSTUG00000010803	ENSSTUG00000010855	ENSSTUG00000010858	NPBWR2 (ENSSTUG00000010865)	oprl1 (ENSSTUG00000010880)	tcea2 (ENSSTUG00000010896)	ENSSTUG00000010909	ENSSTUG00000010919	xkr7b (ENSSTUG00000010925)	ENSSTUG00000010951	rps21 (ENSSTUG00000010967)	ENSSTUG00000010971	lama5 (ENSSTUG00000010980)
River trout	MODERN SPECIES	33	pparab (ENSSTUG00000008239)	yars2 (ENSSTUG00000008230)	cdkn1bb (ENSSTUG00000008220)	ENSSTUG00000008185	mrps35 (ENSSTUG00000008102)	ENSSTUG00000008094	ENSSTUG00000008091	ENSSTUG00000008086	ENSSTUG00000008080	ENSSTUG00000007978	DENND2A (ENSSTUG00000007450)	ADCK2 (ENSSTUG00000007424)	pus7 (ENSSTUG00000007405)	ENSSTUG00000006498	pus7 (ENSSTUG00000005795)	ENSSTUG00000005717 #22	parvb (ENSSTUG00000005704)	SHISAL1 (ENSSTUG00000005703)	ENSSTUG00000005687	plxnb2b (ENSSTUG00000002388)	appl2 (ENSSTUG00000001918)	NUAK1 (ENSSTUG00000001868)	szl (ENSSTUG00000001857)	ENSSTUG00000001851	ENSSTUG00000009520	fgf22 (ENSSTUG00000009499)	ENSSTUG00000009493	ENSSTUG00000009486	ENSSTUG00000009474	ENSSTUG00000009467	micos13 (ENSSTUG00000009464)
Acanthomorphata	ANCESTRAL SPECIES	156							ENSGT00950000182827.B	ENSGT00940000163427.c	ENSGT00940000161689	ENSGT00940000158963.a #27	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128	ENSGT00940000166313.b	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00730000111044	ENSGT00940000155480.d	ENSGT00940000158685	ENSGT00940000157503.j #30	ENSGT00940000159438	ENSGT00390000003348	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000154102.b.a.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g
Cod	MODERN SPECIES		ENSGMOG00000013500	ENSGMOG00000028595	ENSGMOG00000013477	ENSGMOG00000035391	kcnd1 (ENSGMOG00000008556)	ENSGMOG00000010541 #29	plxna3 (ENSGMOG00000010058)	ENSGMOG00000010087	ENSGMOG00000017533	ENSGMOG00000008512	uxt (ENSGMOG00000008520)	ENSGMOG00000035986	ENSGMOG00000006603	otud5a (ENSGMOG00000027301) #27	slc35a2 (ENSGMOG00000006626)	ENSGMOG00000037160 #22	ENSGMOG00000010054	ENSGMOG00000018842 #37	ENSGMOG00000001806	cxxc1a (ENSGMOG00000019497)	ENSGMOG00000036650	ENSGMOG00000005659	ENSGMOG00000028039	mecp2 (ENSGMOG00000033006)	ENSGMOG00000026598	ENSGMOG00000009276	ENSGMOG00000028136	tsr2 (ENSGMOG00000007150)	ENSGMOG00000007156	ENSGMOG00000007167	ENSGMOG00000032102
Euacanthomorphacea	ANCESTRAL SPECIES	61	ENSGT00940000156805	ENSGT00940000156963.a.b	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00990000210258	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000156315.f	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00720000108868 #29
Pinecone sodierfish	MODERN SPECIES	21						abcd1 (ENSMMDG00005017973)	ENSMMDG00005018732	hcfc1b (ENSMMDG00005018736)	ENSMMDG00005018810	mecp2 (ENSMMDG00005018815)	ENSMMDG00005018881	ENSMMDG00005018884	FGD1 (ENSMMDG00005018890)	ENSMMDG00005018911 #30	cxxc1a (ENSMMDG00005018914)	HDAC6 (ENSMMDG00005018921) #22	ENSMMDG00005019393	ENSMMDG00005019395	SYP (ENSMMDG00005019406) #37	cacna1fb (ENSMMDG00005019540)	ENSMMDG00005019548	ENSMMDG00005019551	cdk20 (ENSMMDG00005019552)	uxt (ENSMMDG00005019554)	ENSMMDG00005019555	ENSMMDG00005019557	otud5a (ENSMMDG00005019560) #27	pim2 (ENSMMDG00005019562)	slc35a2 (ENSMMDG00005019564)	slc6a8 (ENSMMDG00005019566)	bcap31 (ENSMMDG00005019569)
Percomorphaceae	ANCESTRAL SPECIES	36	ENSGT00390000002062	ENSGT00940000156963.a.b	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00990000210258	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
Tiger tail seahorse	MODERN SPECIES	514	slc6a17 (ENSHCOG00000004101)	KCNC4 (ENSHCOG00000004112)	mmp9 (ENSHCOG00000004140)	dclre1b (ENSHCOG00000004198)	cpne5a (ENSHCOG00000004236)	lhfpl5b (ENSHCOG00000004253)	srpk1a (ENSHCOG00000004263)	MAPK14 (ENSHCOG00000004282)	ELAPOR1 (ENSHCOG00000004323)	smc5 (ENSHCOG00000004349)	crygs3 (ENSHCOG00000000666)	ENSHCOG00000004364	ENSHCOG00000004378	ENSHCOG00000004390	uxt (ENSHCOG00000004409)	ENSHCOG00000004463 #22	ENSHCOG00000004479	sypa (ENSHCOG00000004501) #37	cacna1fb (ENSHCOG00000010548)	cdk20 (ENSHCOG00000010897)	ENSHCOG00000010920	CXXC1 (ENSHCOG00000011061)	ENSHCOG00000011210 #30	FGD1 (ENSHCOG00000011257)	ENSHCOG00000011281	ACAP3 (ENSHCOG00000011504)	ENSHCOG00000011542	ENSHCOG00000011593	rfc2 (ENSHCOG00000011613)	USP11 (ENSHCOG00000011722)	zgc:86609 (ENSHCOG00000011756)
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00990000210258	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00990000210258	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Eupercaria	ANCESTRAL SPECIES	4	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00990000210258	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00990000210258	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Ballan wrasse	MODERN SPECIES	3178																ENSLBEG00000013593 #22
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00990000210258	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Perciformes	ANCESTRAL SPECIES	37	ENSGT01050000244850.A.a.o.a	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00950000182827.B	ENSGT00940000163427.c	ENSGT00940000158963.a #27	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128	ENSGT00940000156315.f	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT00530000063687.b.b.b	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000154102.b.a.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g	ENSGT00390000012692	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000002062	ENSGT00940000156805	ENSGT00940000156963.a.b
Cottioidei	ANCESTRAL SPECIES	47	ENSGT00940000155869	ENSGT00950000182827.B	ENSGT00940000163427.c	ENSGT00940000158963.a #27	ENSGT00940000165528	ENSGT00940000157571	ENSGT00390000018078	ENSGT00940000159128	ENSGT00940000164755.A	ENSGT00940000159855	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000160502	ENSGT00940000154102.b.a.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g	ENSGT00390000012692	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000002062	ENSGT00940000156805	ENSGT00940000156963.a.b
Stickleback	MODERN SPECIES	252															CXXC1 (ENSGACG00000001153)	ENSGACG00000001150 #22	ENSGACG00000001149	sypa (ENSGACG00000001145) #37	ENSGACG00000001142	ENSGACG00000001139
Lumpfish	MODERN SPECIES	22	slc6a8 (ENSCLMG00005000577)	slc35a2 (ENSCLMG00005000574)	pim2 (ENSCLMG00005000570)	otud5a (ENSCLMG00005000565) #27	ENSCLMG00005000563	ELK1 (ENSCLMG00005000560)	uxt (ENSCLMG00005000558)	cdk20 (ENSCLMG00005000555)	cacna1fb (ENSCLMG00005000553)	mecp2 (ENSCLMG00005000547)	ENSCLMG00005000541	FGD1 (ENSCLMG00005000537)	TFE3 (ENSCLMG00005000535) #30	ENSCLMG00005000534	cxxc1a (ENSCLMG00005000489)	ENSCLMG00005000208 #22	ENSCLMG00005000133	sypa (ENSCLMG00005000117) #37	ENSCLMG00005000110	ENSCLMG00005000096	ENSCLMG00005000075	ENSCLMG00005017751	ENSCLMG00005017746	ENSCLMG00005017745	abcd1 (ENSCLMG00005017334)	PLXNB3 (ENSCLMG00005016945)	SRPK3 (ENSCLMG00005013236)	tsr2 (ENSCLMG00005013178)	ENSCLMG00005013176	GRM6 (ENSCLMG00005013175)	abt1 (ENSCLMG00005013173)
Perciformes_a	ANCESTRAL SPECIES	5	ENSGT00950000182893.a.a.b.b	ENSGT00940000158405	ENSGT00940000160486.d	ENSGT00940000164411	ENSGT00530000063631.b.n.a	ENSGT01090000260003.a.b.b.a.a.b.b.a.l	ENSGT00940000166313.a	ENSGT00940000166196	ENSGT00940000164702.b	ENSGT01030000234549.a.a.a.a.a.a.c.a.b	ENSGT01030000234549.a.a.a.a.a.a.c.a.a	ENSGT01030000234549.a.a.a.b	ENSGT00940000155877	ENSGT00940000157503.i.b #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000160502	ENSGT00940000167532	ENSGT00940000154102.b.a.b	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g	ENSGT00390000012692	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000002062	ENSGT00940000156963.a.b	ENSGT00940000156805
Pike perch	MODERN SPECIES	96	ENSSLUG00000024933	ENSSLUG00000024936	ENSSLUG00000024940	uxt (ENSSLUG00000024941)	cdk20 (ENSSLUG00000024943)	ENSSLUG00000024945	cacna1fb (ENSSLUG00000001514)	ENSSLUG00000001620	ENSSLUG00000001658	ENSSLUG00000001667	FGD1 (ENSSLUG00000001674)	ENSSLUG00000001688 #30	ENSSLUG00000001694	ENSSLUG00000001700	cxxc1a (ENSSLUG00000001738)	ENSSLUG00000001926 #22	ENSSLUG00000002307	sypa (ENSSLUG00000002310) #37	ENSSLUG00000002315	ENSSLUG00000002325	ENSSLUG00000002337	ENSSLUG00000002355	ENSSLUG00000002492	abcd1 (ENSSLUG00000002614)	ENSSLUG00000004185	SRPK3 (ENSSLUG00000005919)	tsr2 (ENSSLUG00000006530)	GRM6 (ENSSLUG00000006540)	abt1 (ENSSLUG00000006557)	CDK16 (ENSSLUG00000006596)	rad51c (ENSSLUG00000006868)
Eupecaria_C	ANCESTRAL SPECIES	31	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Gilthead seabream	MODERN SPECIES	21		CDK16 (ENSSAUG00010018454)	abt1 (ENSSAUG00010018548)	rad51c (ENSSAUG00010018550)	grm6a (ENSSAUG00010018563)	tsr2 (ENSSAUG00010019259)	SRPK3 (ENSSAUG00010019271)	ENSSAUG00010020741	ENSSAUG00010020751	abcd1 (ENSSAUG00010020753)	ENSSAUG00010020809	ENSSAUG00010020828	ENSSAUG00010020871	ENSSAUG00010020873	ENSSAUG00010020874	ENSSAUG00010020876 #22	ENSSAUG00010020928	ENSSAUG00010020930	cacna1fb (ENSSAUG00010020946)	ENSSAUG00010022054	ENSSAUG00010022056	ENSSAUG00010000310	cdk20 (ENSSAUG00010000332)	uxt (ENSSAUG00010000346)	ENSSAUG00010000363	otud5a (ENSSAUG00010000379) #27	pim2 (ENSSAUG00010000399)	slc35a2 (ENSSAUG00010000411)	slc6a8 (ENSSAUG00010000427)	bcap31 (ENSSAUG00010000436)	plxna3 (ENSSAUG00010000551)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	42	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
European seabass	MODERN SPECIES	14	ENSDLAG00005014385	tsr2 (ENSDLAG00005029437)	SRPK3 (ENSDLAG00005031799)	ENSDLAG00005030649	abcd1 (ENSDLAG00005016340)	ENSDLAG00005029985	ENSDLAG00005004085	ENSDLAG00005033657	ENSDLAG00005004067	ENSDLAG00005031463	ENSDLAG00005028443	ENSDLAG00005034191	ENSDLAG00005030977	ENSDLAG00005028920 #30	cxxc1a (ENSDLAG00005031159)	ENSDLAG00005031629 #22	ENSDLAG00005024640	sypa (ENSDLAG00005010429) #37	ENSDLAG00005035007	ENSDLAG00005033843	ENSDLAG00005031568	ENSDLAG00005028442	ENSDLAG00005023471	ENSDLAG00005032699	ENSDLAG00005017906	otud5a (ENSDLAG00005017971) #27	ENSDLAG00005031156	pim2 (ENSDLAG00005029998)	slc35a2 (ENSDLAG00005026420)	ENSDLAG00005017434	ENSDLAG00005026839
Large yellow croaker	MODERN SPECIES	29	ENSLCRG00005002745	kcnd1 (ENSLCRG00005002725)	gripap1 (ENSLCRG00005002643) #29	ptpn18 (ENSLCRG00005002490)	plxna3 (ENSLCRG00005002156)	bcap31 (ENSLCRG00005021414)	slc6a8 (ENSLCRG00005021393)	slc35a2 (ENSLCRG00005021388)	pim2 (ENSLCRG00005021369)	otud5a (ENSLCRG00005021366) #27	ENSLCRG00005021351	ENSLCRG00005021350	ENSLCRG00005021349	uxt (ENSLCRG00005021348)	cdk20 (ENSLCRG00005021327)	ENSLCRG00005021172 #22	ENSLCRG00005021163	sypa (ENSLCRG00005021160) #37	cacna1fb (ENSLCRG00005021100)	ENSLCRG00005021098	CXXC1 (ENSLCRG00005021056)	ENSLCRG00005021054	TFE3 (ENSLCRG00005021053) #30	FGD1 (ENSLCRG00005020901)	ENSLCRG00005020895	mecp2 (ENSLCRG00005020893)	ENSLCRG00005020885	ENSLCRG00005020884	ENSLCRG00005020882	abcd1 (ENSLCRG00005020298)	PLXNB3 (ENSLCRG00005020040)
Tetraodontidae	ANCESTRAL SPECIES	61	ENSGT00940000160485	ENSGT00550000075050	ENSGT00950000182872.f.a.a.a.a.a.a	ENSGT00940000156477.d.b	ENSGT00940000156963.a.b.f	ENSGT00390000002062	ENSGT00940000156805	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT00940000175919	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37
Fugu	MODERN SPECIES	15	rfc2 (ENSTRUG00000009924)	ENSTRUG00000009677	ENSTRUG00000023944	CDK16 (ENSTRUG00000009222)	abt1 (ENSTRUG00000002298)	rad51c (ENSTRUG00000031941)	ENSTRUG00000008947	SRPK3 (ENSTRUG00000008496)	ENSTRUG00000027194	ENSTRUG00000006646	mecp2 (ENSTRUG00000031924)	ENSTRUG00000025307	FGD1 (ENSTRUG00000005916)	TFE3 (ENSTRUG00000005584) #30	ENSTRUG00000026840	HDAC6 (ENSTRUG00000004270) #22	ENSTRUG00000004245	SYP (ENSTRUG00000004025) #37	snx21 (ENSTRUG00000032323)	hm13 (ENSTRUG00000006292)	mrgbp (ENSTRUG00000006219)	ENSTRUG00000026937	ENSTRUG00000027046	ENSTRUG00000028028	ENSTRUG00000026810	ENSTRUG00000030759	SULF2 (ENSTRUG00000031734)	glod5 (ENSTRUG00000027839) #20
Tetraodon	MODERN SPECIES	26	rtn4a (ENSTNIG00000002143)	ENSTNIG00000002144	ENSTNIG00000002145	ENSTNIG00000002146	ENSTNIG00000006222	ENSTNIG00000002147	ezh2 (ENSTNIG00000004203)	stk38a (ENSTNIG00000002148)	stk35 (ENSTNIG00000002149)	ENSTNIG00000002150	ENSTNIG00000002151	ENSTNIG00000000176	fmr1 (ENSTNIG00000002152)	ENSTNIG00000002153	dnajc25 (ENSTNIG00000002154)	HDAC6 (ENSTNIG00000002155) #22	ENSTNIG00000002156	ENSTNIG00000002157	ENSTNIG00000002159	ENSTNIG00000002161	ENSTNIG00000002162	ENSTNIG00000000571	ccdc106a (ENSTNIG00000002163)	ENSTNIG00000002164	ENSTNIG00000002165	ENSTNIG00000000063	ENSTNIG00000001583	hlfa (ENSTNIG00000002167)	dtd2 (ENSTNIG00000000153)	dtd2 (ENSTNIG00000000949)	HMX3 (ENSTNIG00000002168)
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000175919	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000169444	ENSGT00940000156315.f	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000156963.a.b	ENSGT00390000002062	ENSGT00390000012692	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00940000156805	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000175919	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000170958	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
Climbing perch	MODERN SPECIES	20	ENSATEG00000019071	SRPK3 (ENSATEG00000019084)	ENSATEG00000019117	ENSATEG00000019296	abcd1 (ENSATEG00000019330)	ENSATEG00000019386	ENSATEG00000019432	ENSATEG00000026321	ENSATEG00000028169	ENSATEG00000019515	ENSATEG00000019532	ENSATEG00000019560	ENSATEG00000019578 #30	ENSATEG00000019604	cxxc1a (ENSATEG00000019631)	ENSATEG00000019652 #22	ENSATEG00000019759	sypa (ENSATEG00000019777) #37	ENSATEG00000019809	ENSATEG00000019956	ENSATEG00000020005	ENSATEG00000020059	uxt (ENSATEG00000021229)	ENSATEG00000020141	ENSATEG00000020181	otud5a (ENSATEG00000020211) #27	pim2 (ENSATEG00000020263)	slc35a2 (ENSATEG00000020284)	ENSATEG00000020314	ENSATEG00000026362	plxna3 (ENSATEG00000020417)
Siamese fighting fish	MODERN SPECIES	18									ENSBSLG00000010491	abcd1 (ENSBSLG00000010828)	ENSBSLG00000011544	mecp2 (ENSBSLG00000011570)	ENSBSLG00000011979	FGD1 (ENSBSLG00000012015)	ENSBSLG00000012370 #30	ENSBSLG00000013249 #22	ENSBSLG00000013668	sypa (ENSBSLG00000013678) #37	ENSBSLG00000016683	ENSBSLG00000016917	ENSBSLG00000016928	cdk20 (ENSBSLG00000016954)	uxt (ENSBSLG00000017147)	ENSBSLG00000017172	ENSBSLG00000017217	otud5a (ENSBSLG00000017266) #27	pim2 (ENSBSLG00000017383)	ENSBSLG00000017395	slc35a2 (ENSBSLG00000017401)	slc35a2 (ENSBSLG00000017421)	slc6a8 (ENSBSLG00000017595)
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000011498	grm6a (ENSMAMG00000011504)	tsr2 (ENSMAMG00000011540)	SRPK3 (ENSMAMG00000011547)	ENSMAMG00000011573	abcd1 (ENSMAMG00000011668)	ENSMAMG00000011700	ENSMAMG00000011723	ENSMAMG00000011744	ENSMAMG00000011796	ENSMAMG00000011807	ENSMAMG00000011823	ENSMAMG00000011838 #30	ENSMAMG00000011870	cxxc1a (ENSMAMG00000011895)	ENSMAMG00000011914 #22	ENSMAMG00000011945	sypa (ENSMAMG00000012046) #37	ENSMAMG00000012089	ENSMAMG00000012150	ENSMAMG00000012168	ENSMAMG00000012218	ENSMAMG00000012180	uxt (ENSMAMG00000012227)	ENSMAMG00000012258	ENSMAMG00000012314	otud5a (ENSMAMG00000012329) #27	pim2 (ENSMAMG00000012351)	slc35a2 (ENSMAMG00000012367)	ENSMAMG00000012404	ENSMAMG00000012430
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000175919	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000175919	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000156315.f	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a
Seriola	ANCESTRAL SPECIES	75	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000175919	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000154856.A.b.e.a	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000156038.a.b.b.i.a.a	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869
Greater amberjack	MODERN SPECIES	150	GRM6 (ENSSDUG00000019376)	tsr2 (ENSSDUG00000019445)	SRPK3 (ENSSDUG00000019453)	ENSSDUG00000019492	PLXNB3 (ENSSDUG00000019515)	abcd1 (ENSSDUG00000019696)	ENSSDUG00000019722	ENSSDUG00000019763	ENSSDUG00000019781	mecp2 (ENSSDUG00000019809)	ENSSDUG00000019824	FGD1 (ENSSDUG00000019849)	TFE3 (ENSSDUG00000019935) #30	ENSSDUG00000019955	cxxc1a (ENSSDUG00000019959)	ENSSDUG00000019982 #22	ENSSDUG00000020058	sypa (ENSSDUG00000020071) #37	ENSSDUG00000020093	cacna1fb (ENSSDUG00000020229)	ENSSDUG00000020447	ENSSDUG00000020469	cdk20 (ENSSDUG00000020480)	uxt (ENSSDUG00000020504)	ENSSDUG00000020521	ENSSDUG00000020547	ENSSDUG00000020584	otud5a (ENSSDUG00000020736) #27	pim2 (ENSSDUG00000020782)	slc35a2 (ENSSDUG00000020792)	slc6a8 (ENSSDUG00000020817)
Yellowtail amberjack	MODERN SPECIES	2724	GRM6 (ENSSLDG00000005543)	tsr2 (ENSSLDG00000005598)	SRPK3 (ENSSLDG00000005703)	PLXNB3 (ENSSLDG00000005974)	abcd1 (ENSSLDG00000006205)	ENSSLDG00000006250	ENSSLDG00000006262	ENSSLDG00000006286	mecp2 (ENSSLDG00000006333)	ENSSLDG00000006346	ENSSLDG00000006375	ENSSLDG00000006396	TFE3 (ENSSLDG00000006428) #30	ENSSLDG00000006443	CXXC1 (ENSSLDG00000006497)	ENSSLDG00000006702 #22	ENSSLDG00000006797	sypa (ENSSLDG00000006865) #37	ENSSLDG00000006900
Barramundi perch	MODERN SPECIES	443									ENSLCAG00010017580	cacna1fb (ENSLCAG00010017615)	ENSLCAG00010017672	FGD1 (ENSLCAG00010017675)	TFE3 (ENSLCAG00010017698) #30	ENSLCAG00010017702	cxxc1a (ENSLCAG00010017703)	HDAC6 (ENSLCAG00010017708) #22	ENSLCAG00010017720	ENSLCAG00010017725	sypa (ENSLCAG00010017728) #37	ENSLCAG00010017736	mecp2 (ENSLCAG00010017746)	ENSLCAG00010017753	abcd1 (ENSLCAG00010017910)	PLXNB3 (ENSLCAG00010017937)	SRPK3 (ENSLCAG00010017967)	ENSLCAG00010017968	abt1 (ENSLCAG00010017969)	rad51c (ENSLCAG00010017971)	GRM6 (ENSLCAG00010018045)	ENSLCAG00010018354	CDK16 (ENSLCAG00010018396)
Pleuronectoidei	ANCESTRAL SPECIES	24	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000175919	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00940000181187	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
Tongue sole	MODERN SPECIES	1	rad51c (ENSCSEG00000016935)	CDK16 (ENSCSEG00000016955)	tsr2 (ENSCSEG00000017003)	SRPK3 (ENSCSEG00000017017)	ENSCSEG00000017060	abcd1 (ENSCSEG00000017155)	ENSCSEG00000017213	ENSCSEG00000017270	ENSCSEG00000017284	ENSCSEG00000017325	ENSCSEG00000017332	FGD1 (ENSCSEG00000017343)	ENSCSEG00000017362 #30	ENSCSEG00000017371	CXXC1 (ENSCSEG00000017380)	HDAC6 (ENSCSEG00000017407) #22	ENSCSEG00000017474	sypa (ENSCSEG00000017580) #37	cacna1fb (ENSCSEG00000017631)	ENSCSEG00000017884	ENSCSEG00000017899	cdk20 (ENSCSEG00000017909)	uxt (ENSCSEG00000017921)	ENSCSEG00000017931	ENSCSEG00000017939	slc35a2 (ENSCSEG00000017956)	slc6a8 (ENSCSEG00000017972)	ENSCSEG00000017993	bcap31 (ENSCSEG00000018042)	plxna3 (ENSCSEG00000018064)	gripap1 (ENSCSEG00000018111) #29
Turbot	MODERN SPECIES	2	ENSSMAG00000013261	ENSSMAG00000013331	FGD3 (ENSSMAG00000013383)	ENSSMAG00000013423	ENSSMAG00000031042	ENSSMAG00000013460	WNK2 (ENSSMAG00000013474)	ENSSMAG00000013667	ENSSMAG00000034638	ENSSMAG00000013840	ENSSMAG00000013897	ENSSMAG00000030811	ENSSMAG00000026665	ENSSMAG00000027784	ENSSMAG00000013976	ENSSMAG00000013987 #22	ENSSMAG00000014007	sypa (ENSSMAG00000014062) #37	ENSSMAG00000014100	ENSSMAG00000035771	ENSSMAG00000014343	uxt (ENSSMAG00000014363)	ENSSMAG00000014381	ENSSMAG00000014411	otud5a (ENSSMAG00000014429) #27	pim2 (ENSSMAG00000014470)	slc35a2 (ENSSMAG00000014490)	ENSSMAG00000014523	ENSSMAG00000014595	plxna3 (ENSSMAG00000014612)	ptpn18 (ENSSMAG00000014799)
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
Cichlidae	ANCESTRAL SPECIES		ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.a.a	ENSGT00940000170958	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.f #37	ENSGT01030000234637.b.c.g.e #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.a.a	ENSGT00940000170958	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c.s	ENSGT00950000182827.B	ENSGT00940000155869
Nile tilapia	MODERN SPECIES	12	grm6a (ENSONIG00000000755)	tsr2 (ENSONIG00000000763)	SRPK3 (ENSONIG00000000769)	PLXNB3 (ENSONIG00000000783)	abcd1 (ENSONIG00000000793)	ENSONIG00000000800	ENSONIG00000000801	ENSONIG00000000806	ENSONIG00000040360	ENSONIG00000030751	FGD1 (ENSONIG00000000817)	TFE3 (ENSONIG00000000820) #30	ENSONIG00000038680	ENSONIG00000038372	cxxc1a (ENSONIG00000000828)	HDAC6 (ENSONIG00000000836) #22	ENSONIG00000029354	ENSONIG00000038349	sypa (ENSONIG00000000856) #37	cacna1fb (ENSONIG00000000861)	ENSONIG00000000908	plxna3 (ENSONIG00000014622)	ENSONIG00000033808	bcap31 (ENSONIG00000014613)	slc6a8 (ENSONIG00000014610)	ENSONIG00000034502	slc35a2 (ENSONIG00000014609)	pim2 (ENSONIG00000038019)	ENSONIG00000037732	otud5a (ENSONIG00000014602) #27	ENSONIG00000014599
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	18	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.f #37	ENSGT01030000234637.b.c.g.e #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT01070000253760.b.a.a.a.a.b.b.k.b.a.a.a	ENSGT00940000170958	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c.s	ENSGT00950000182827.B	ENSGT00940000155869
Haplochromini	ANCESTRAL SPECIES	20	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.f #37	ENSGT01030000234637.b.c.g.e #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c.s	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
Burton s mouthbrooder	MODERN SPECIES	396	rad51c (ENSHBUG00000021032)	grm6a (ENSHBUG00000021021)	tsr2 (ENSHBUG00000020989)	SRPK3 (ENSHBUG00000020976)	PLXNB3 (ENSHBUG00000020962)	abcd1 (ENSHBUG00000020860)	ENSHBUG00000020813	ENSHBUG00000020787	ENSHBUG00000020760	ENSHBUG00000020716	ENSHBUG00000020689	FGD1 (ENSHBUG00000020661)	TFE3 (ENSHBUG00000020599) #30	zgc:113363 (ENSHBUG00000020240)	cxxc1a (ENSHBUG00000020227)	HDAC6 (ENSHBUG00000020208) #22	ENSHBUG00000000790	sypa (ENSHBUG00000020057) #37	sypa (ENSHBUG00000020041) #37	cacna1fb (ENSHBUG00000020008)	ENSHBUG00000019603	cdk20 (ENSHBUG00000019590)	uxt (ENSHBUG00000019558)	ENSHBUG00000019545	ENSHBUG00000019517	otud5a (ENSHBUG00000019501) #27	pim2 (ENSHBUG00000019471)	slc35a2 (ENSHBUG00000019448)	ENSHBUG00000019418	slc6a8 (ENSHBUG00000019411)	bcap31 (ENSHBUG00000019391)
Haplochromini_A	ANCESTRAL SPECIES	17	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.f #37	ENSGT01030000234637.b.c.g.e #37	ENSGT00940000159855	ENSGT00940000170958	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c.s	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
P. nyererei	MODERN SPECIES	505	rad51c (ENSPNYG00000019952)	grm6a (ENSPNYG00000019962)	tsr2 (ENSPNYG00000019995)	ENSPNYG00000020006	SRPK3 (ENSPNYG00000020031)	ENSPNYG00000020080	abcd1 (ENSPNYG00000020284)	ENSPNYG00000020321	ENSPNYG00000020329	ENSPNYG00000020350	ENSPNYG00000020387	ENSPNYG00000020399	FGD1 (ENSPNYG00000020422)	TFE3 (ENSPNYG00000020458) #30	CXXC1 (ENSPNYG00000020491)	HDAC6 (ENSPNYG00000020695) #22	ENSPNYG00000020743	sypa (ENSPNYG00000020759) #37	sypa (ENSPNYG00000020841) #37	cacna1fb (ENSPNYG00000020927)	ENSPNYG00000021009	ENSPNYG00000021022	ENSPNYG00000021030	ENSPNYG00000021040	ENSPNYG00000021060
Haplochromini_B	ANCESTRAL SPECIES	14	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g.f #37	ENSGT01030000234637.b.c.g.e #37	ENSGT00940000159855	ENSGT00940000170958	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000158963.a #27	ENSGT00940000163427.c.s	ENSGT00950000182827.B	ENSGT00940000155869	ENSGT00390000011863.c	ENSGT01050000244850.A.a.o.a
Zebra mbuna	MODERN SPECIES	1103	rad51c (ENSMZEG00005026750)	grm6a (ENSMZEG00005026751)	tsr2 (ENSMZEG00005026752)	SRPK3 (ENSMZEG00005026753)	ENSMZEG00005026754	abcd1 (ENSMZEG00005026756)	ENSMZEG00005026757	ENSMZEG00005026759	ENSMZEG00005026760	ENSMZEG00005026761	ENSMZEG00005026762	FGD1 (ENSMZEG00005026763)	TFE3 (ENSMZEG00005026764) #30	ENSMZEG00005026765	cxxc1a (ENSMZEG00005026766)	HDAC6 (ENSMZEG00005026767) #22	ENSMZEG00005026768	sypa (ENSMZEG00005026769) #37	sypa (ENSMZEG00005026770) #37	cacna1fb (ENSMZEG00005026771)	ENSMZEG00005026772	ENSMZEG00005026773	ENSMZEG00005026774	ENSMZEG00005026775	ENSMZEG00005026776	ENSMZEG00005026777	ENSMZEG00005026778	st14b (ENSMZEG00005026779)	kcnd1 (ENSMZEG00005026780)	gripap1 (ENSMZEG00005026781) #29	ptpn18 (ENSMZEG00005026782)
Eastern happy	MODERN SPECIES	12	tsr2 (ENSACLG00000014269)	ENSACLG00000014259	SRPK3 (ENSACLG00000014229)	ENSACLG00000013976	ENSACLG00000013969	abcd1 (ENSACLG00000013880)	ENSACLG00000013776	ENSACLG00000013767	ENSACLG00000013689	ENSACLG00000013679	ENSACLG00000013662	FGD1 (ENSACLG00000013633)	TFE3 (ENSACLG00000013619) #30	ENSACLG00000013610	cxxc1a (ENSACLG00000013463)	HDAC6 (ENSACLG00000013440) #22	ENSACLG00000013430	sypa (ENSACLG00000013420) #37	SYP (ENSACLG00000013253) #37	ENSACLG00000013244	ENSACLG00000013234	ENSACLG00000013224	ENSACLG00000013217	ENSACLG00000013207	cdk20 (ENSACLG00000013168)	uxt (ENSACLG00000013141)	ENSACLG00000013136	ENSACLG00000013127	ENSACLG00000012995	otud5a (ENSACLG00000012993) #27	pim2 (ENSACLG00000012986)
Lyretail cichlid	MODERN SPECIES	397	GRM6 (ENSNBRG00000007667)	tsr2 (ENSNBRG00000007965)	ENSNBRG00000007974	SRPK3 (ENSNBRG00000007989)	PLXNB3 (ENSNBRG00000008035)	abcd1 (ENSNBRG00000008264)	ENSNBRG00000008309	ENSNBRG00000008338	ENSNBRG00000008359	mecp2 (ENSNBRG00000008411)	ENSNBRG00000008488	FGD1 (ENSNBRG00000008517)	TFE3 (ENSNBRG00000008566) #30	ENSNBRG00000008595	cxxc1a (ENSNBRG00000008635)	HDAC6 (ENSNBRG00000008791) #22	ENSNBRG00000008903	sypa (ENSNBRG00000008978) #37	sypa (ENSNBRG00000008996) #37	cacna1fb (ENSNBRG00000009240)	ENSNBRG00000009843	ENSNBRG00000009856	ENSNBRG00000009878	ENSNBRG00000009922	cdk20 (ENSNBRG00000009932)	ENSNBRG00000009951	ENSNBRG00000009958	ENSNBRG00000009968	otud5a (ENSNBRG00000009988) #27	pim2 (ENSNBRG00000010000)	slc35a2 (ENSNBRG00000010015)
Midas cichlid	MODERN SPECIES	129	rad51c (ENSACIG00000004925)	grm6a (ENSACIG00000004895)	tsr2 (ENSACIG00000004880)	ENSACIG00000004868	SRPK3 (ENSACIG00000004837)	PLXNB3 (ENSACIG00000004668)	abcd1 (ENSACIG00000004632)	ENSACIG00000004604	ENSACIG00000004586	ENSACIG00000004554	ENSACIG00000004533	ENSACIG00000004515	FGD1 (ENSACIG00000004445)	TFE3 (ENSACIG00000004421) #30	cxxc1a (ENSACIG00000004393)	HDAC6 (ENSACIG00000004282) #22	ENSACIG00000004183	sypa (ENSACIG00000004050) #37	sypa (ENSACIG00000004022) #37	cacna1fb (ENSACIG00000003899)	ENSACIG00000003885	ENSACIG00000003865	ENSACIG00000003854	cdk20 (ENSACIG00000003831)	uxt (ENSACIG00000003803)	ENSACIG00000003790	ENSACIG00000003747	otud5a (ENSACIG00000003728) #27	pim2 (ENSACIG00000003679)	slc35a2 (ENSACIG00000003659)
Pomacentridae	DUPLICATION
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00940000159563.i #22
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00940000159563.i #22
Amphiprion	ANCESTRAL SPECIES																	ENSGT00940000159563.i #22
Clown anemonefish	MODERN SPECIES	885																ENSAOCG00000015434 #22	ENSAOCG00000001069	sypa (ENSAOCG00000015394) #37
Pomacentridae	ANCESTRAL SPECIES	94	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00940000156805	ENSGT00390000002062	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000175919	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563.j #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37
Pomacentridae_A	ANCESTRAL SPECIES	92	ENSGT00390000012692	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00940000156805	ENSGT00390000002062	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563.j #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37
Amphiprion	ANCESTRAL SPECIES	119	ENSGT00390000012692	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00940000156805	ENSGT00390000002062	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563.j #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37
Clown anemonefish	MODERN SPECIES	2721								ENSAOCG00000011505	ENSAOCG00000011571	mecp2 (ENSAOCG00000011591)	ENSAOCG00000011613	FGD1 (ENSAOCG00000011634)	ENSAOCG00000011660 #30	ENSAOCG00000011679	cxxc1a (ENSAOCG00000011751)	HDAC6 (ENSAOCG00000011803) #22	ENSAOCG00000011830
Orange clownfish	MODERN SPECIES	22	abt1 (ENSAPEG00000023617)	SRPK3 (ENSAPEG00000023629)	PLXNB3 (ENSAPEG00000023646)	ENSAPEG00000023723	ENSAPEG00000023797	abcd1 (ENSAPEG00000023814)	ENSAPEG00000023882	ENSAPEG00000023917	mecp2 (ENSAPEG00000023997)	ENSAPEG00000024051	FGD1 (ENSAPEG00000024070)	ENSAPEG00000024096 #30	ENSAPEG00000024105	ENSAPEG00000024110	cxxc1a (ENSAPEG00000024116)	HDAC6 (ENSAPEG00000024131) #22	ENSAPEG00000024156	sypa (ENSAPEG00000024182) #37
Spiny chromis	MODERN SPECIES	2601															CXXC1 (ENSAPOG00000003150)	ENSAPOG00000003012 #22
Bicolor damselfish	MODERN SPECIES	1261					PLXNB3 (ENSSPAG00000004990)	abcd1 (ENSSPAG00000005074)	ENSSPAG00000005100	ENSSPAG00000005148	ENSSPAG00000005179	mecp2 (ENSSPAG00000005289)	ENSSPAG00000005299	FGD1 (ENSSPAG00000005329)	TFE3 (ENSSPAG00000005397) #30	ENSSPAG00000005409	cxxc1a (ENSSPAG00000005419)	HDAC6 (ENSSPAG00000005465) #22	ENSSPAG00000005676	sypa (ENSSPAG00000005782) #37
Atherinomorphae	ANCESTRAL SPECIES	50	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000166313.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868 #29	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a	ENSGT00390000011863.c
Oryzias	ANCESTRAL SPECIES	45													ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT01100000264848	ENSGT00940000178358	ENSGT00390000013740	ENSGT00510000048446	ENSGT00940000158374.c
Oryzias_b	ANCESTRAL SPECIES	48	ENSGT00520000055578.a.a.c	ENSGT00940000164771.b	ENSGT00530000063687.b.b.b	ENSGT00940000160502	ENSGT00940000175919	ENSGT00950000182955.a.b.a	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00940000157877.b.g	ENSGT00390000012692	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00940000156805	ENSGT00390000002062	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A.b	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT01100000264848	ENSGT00940000178358	ENSGT00390000013740	ENSGT00510000048446	ENSGT00940000158374.c
Indian medaka	MODERN SPECIES	23	ENSOMEG00000011232	ENSOMEG00000011274	abcd1 (ENSOMEG00000011346)	ENSOMEG00000011376	ENSOMEG00000011387	ENSOMEG00000011405	SRPK3 (ENSOMEG00000011459)	ENSOMEG00000011469	tsr2 (ENSOMEG00000011483)	GRM6 (ENSOMEG00000011505)	rad51c (ENSOMEG00000011578)	abt1 (ENSOMEG00000011593)	FGD1 (ENSOMEG00000011622)	ENSOMEG00000011663 #30	CXXC1 (ENSOMEG00000011705)	ENSOMEG00000011758 #22	ENSOMEG00000011782	sypa (ENSOMEG00000011916) #37	ENSOMEG00000011964	ENSOMEG00000011973	ENSOMEG00000011995	cdk20 (ENSOMEG00000012028)	uxt (ENSOMEG00000012056)	ENSOMEG00000012072	ENSOMEG00000012103	stk38a (ENSOMEG00000012145)	dennd2da (ENSOMEG00000000303)	ENSOMEG00000000306	renbp (ENSOMEG00000012291)	pex10 (ENSOMEG00000012307)	plch2a (ENSOMEG00000012519)
Javanese ricefish	MODERN SPECIES	21	ENSOJAG00000001739	asxl1 (ENSOJAG00000002014)	ENSOJAG00000002049	mecp2 (ENSOJAG00000002090)	ENSOJAG00000002120	abcd1 (ENSOJAG00000002175)	SRPK3 (ENSOJAG00000003070)	ENSOJAG00000003748	grm6a (ENSOJAG00000003817)	ENSOJAG00000003947	abt1 (ENSOJAG00000003999)	FGD1 (ENSOJAG00000004025)	ENSOJAG00000004234	TFE3 (ENSOJAG00000004250) #30	CXXC1 (ENSOJAG00000004282)	ENSOJAG00000004339 #22	ENSOJAG00000005018	SYP (ENSOJAG00000005032) #37	ENSOJAG00000007688	cdk20 (ENSOJAG00000007754)	uxt (ENSOJAG00000007790)	ENSOJAG00000007805	stk38a (ENSOJAG00000007879)	dennd2da (ENSOJAG00000007970)	prkcz (ENSOJAG00000008100)	skia (ENSOJAG00000008868)	plch2a (ENSOJAG00000008979)	ENSOJAG00000009166	pex10 (ENSOJAG00000009201)	renbp (ENSOJAG00000009223)	ENSOJAG00000009584
Oryzias_a	ANCESTRAL SPECIES	54															ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000153544.a.i.b	ENSGT00950000182931.A.a.b	ENSGT01100000264848	ENSGT00940000178358	ENSGT00390000013740	ENSGT00510000048446	ENSGT00940000158374.c	ENSGT00940000160546	ENSGT00610000087015
Japanese Medaka HdrR	MODERN SPECIES	21									ENSORLG00000026207	ENSORLG00000028293	ENSORLG00000020512	FGD1 (ENSORLG00000030210)	ENSORLG00000029338 #30	ENSORLG00000024356	ENSORLG00000019591	ENSORLG00000029710 #22	ENSORLG00000022058	sypa (ENSORLG00000025491) #37	ENSORLG00000023272	ENSORLG00000016984	ENSORLG00000022121	ENSORLG00000022560	ENSORLG00000025450	ENSORLG00000022369	cdk20 (ENSORLG00000016961)	uxt (ENSORLG00000027697)	ENSORLG00000016950	ENSORLG00000016935	stk38a (ENSORLG00000016924)	dennd2da (ENSORLG00000020542)	ENSORLG00000016906
Cyprinodontiformes	ANCESTRAL SPECIES	46	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000169444	ENSGT00940000159247.m	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868 #29	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a
Aplocheiloidei	ANCESTRAL SPECIES	291													ENSGT00530000063687.b.b.b	ENSGT00940000159438	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37
Turquoise killifish	MODERN SPECIES	1624	FKBP1AB (ENSNFUG00015021354)	SDCBP (ENSNFUG00015021361)	SNPHB (ENSNFUG00015021380)	CDK16 (ENSNFUG00015021444)	abt1 (ENSNFUG00015022221)	rad51c (ENSNFUG00015022227)	ENSNFUG00015022247	ENSNFUG00015022285	abcd1 (ENSNFUG00015022296)	SRPK3 (ENSNFUG00015022414)	ENSNFUG00015022422	ENSNFUG00015022436	FGD1 (ENSNFUG00015022464)	ZGC (ENSNFUG00015022843)	cxxc1a (ENSNFUG00015022848)	HDAC6 (ENSNFUG00015022882) #22	ENSNFUG00015023118	sypa (ENSNFUG00015023119) #37	ENSNFUG00015023120	ENSNFUG00015023199	PLXNA3 (ENSNFUG00015023270)	ENSNFUG00015023511	gripap1 (ENSNFUG00015023514) #29	kcnd1 (ENSNFUG00015023528)	st14b (ENSNFUG00015023531)	Nfu_g_1_015622 (ENSNFUG00015023537)	ENSNFUG00015023545	ENSNFUG00015023547	UXT (ENSNFUG00015023549)	cdk20 (ENSNFUG00015023559)	ENSNFUG00015023566
Cyprinodontoidei	ANCESTRAL SPECIES	57	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000164472.a.a.b.b.a.a.a.a	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000169444	ENSGT00940000159247.m	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868 #29	ENSGT00940000164289.a
NAME_4	ANCESTRAL SPECIES	162	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000159855	ENSGT00940000164472.a.a.b.b.a.a.a.a	ENSGT00940000164755.A	ENSGT00940000164755.C	ENSGT00940000159247.m	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000165528	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868 #29	ENSGT00940000164289.a
Sheepshead minnow	MODERN SPECIES	140	ENSCVAG00000001832	grm6a (ENSCVAG00000001842)	tsr2 (ENSCVAG00000001845)	SRPK3 (ENSCVAG00000001855)	PLXNB3 (ENSCVAG00000001870)	abcd1 (ENSCVAG00000001887)	ENSCVAG00000001895	ENSCVAG00000001900	ENSCVAG00000001909	mecp2 (ENSCVAG00000001916)	ENSCVAG00000001919	FGD1 (ENSCVAG00000001930)	TFE3 (ENSCVAG00000001957) #30	ENSCVAG00000001963	cxxc1a (ENSCVAG00000002083)	ENSCVAG00000002108 #22	ENSCVAG00000002115	sypa (ENSCVAG00000002124) #37	cacna1fb (ENSCVAG00000008470)	ENSCVAG00000008635	ENSCVAG00000008649	ENSCVAG00000008653	cdk20 (ENSCVAG00000008666)
Mummichog	MODERN SPECIES	642						ENSFHEG00000017828	ENSFHEG00000017805	ENSFHEG00000017791	ENSFHEG00000017782	ENSFHEG00000017774	FGD1 (ENSFHEG00000017757)	TFE3 (ENSFHEG00000017710) #30	ENSFHEG00000017699	ENSFHEG00000000878	cxxc1a (ENSFHEG00000017673)	ENSFHEG00000017629 #22	SYP (ENSFHEG00000017586) #37	ENSFHEG00000017551	ENSFHEG00000017534	ENSFHEG00000017472
Poeciliinae	ANCESTRAL SPECIES	45	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000164472.a.a.b.b.a.a.a.a	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000169444	ENSGT00940000156315.f	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a	ENSGT00720000108868.g #29	ENSGT00940000164289.a	ENSGT01050000244850.A.a.o.a
Platyfish	MODERN SPECIES		rad51c (ENSXMAG00000003344)	grm6a (ENSXMAG00000003346)	tsr2 (ENSXMAG00000024827)	SRPK3 (ENSXMAG00000003381)	PLXNB3 (ENSXMAG00000003393)	abcd1 (ENSXMAG00000003466)	ENSXMAG00000024465	ENSXMAG00000021127	ENSXMAG00000003511	ENSXMAG00000021429	ENSXMAG00000025932	FGD1 (ENSXMAG00000003528)	ENSXMAG00000003547 #30	ENSXMAG00000021186	cxxc1a (ENSXMAG00000013043)	ENSXMAG00000013014 #22	ENSXMAG00000006655	sypa (ENSXMAG00000001545) #37	ENSXMAG00000021723	ENSXMAG00000024741	ENSXMAG00000022561	ENSXMAG00000029137	ENSXMAG00000021321	ENSXMAG00000022112	cdk20 (ENSXMAG00000001385)	ENSXMAG00000001372	ENSXMAG00000024597	st14b (ENSXMAG00000025664)	kcnd1 (ENSXMAG00000015183)	gripap1 (ENSXMAG00000015220) #29	ptpn18 (ENSXMAG00000018760)
Poecilia	ANCESTRAL SPECIES	79	ENSGT00390000002062	ENSGT00940000156805	ENSGT01030000234648.a.b.a.b.a.a	ENSGT00390000012692	ENSGT00940000157877.b.g	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a	ENSGT00940000154102.b.a.b	ENSGT00940000167532	ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT01030000234637.b.c.g #37	ENSGT00940000164472.a.a.b.b.a.a.a.a	ENSGT00940000159855	ENSGT00940000164755.A	ENSGT00940000169444	ENSGT00940000156315.f	ENSGT00940000159128	ENSGT00390000018078	ENSGT00940000157571	ENSGT00940000164481.b.b	ENSGT00940000155472.a.a
Guppy	MODERN SPECIES	9	tsr2 (ENSPREG00000013009)	SRPK3 (ENSPREG00000012974)	ENSPREG00000012919	ENSPREG00000012909	ENSPREG00000012865	abcd1 (ENSPREG00000012807)	ENSPREG00000012777	ENSPREG00000012748	ENSPREG00000012629	mecp2 (ENSPREG00000012585)	ENSPREG00000012549	FGD1 (ENSPREG00000012524)	ENSPREG00000012514	ENSPREG00000012507	cxxc1a (ENSPREG00000012472)	HDAC6 (ENSPREG00000012414) #22	ENSPREG00000012354	sypa (ENSPREG00000012259) #37	ENSPREG00000012233	cacna1fb (ENSPREG00000012143)	ENSPREG00000012119	ENSPREG00000012108	cdk20 (ENSPREG00000012025)	uxt (ENSPREG00000011973)	ENSPREG00000011961	ENSPREG00000011952	st14b (ENSPREG00000011879)	kcnd1 (ENSPREG00000011841)
NAME_6	ANCESTRAL SPECIES	351										ENSGT00940000160502	ENSGT00530000063687.b.b.b	ENSGT00390000003348	ENSGT00940000159438	ENSGT00940000157503.j #30	ENSGT00730000111044	ENSGT00940000159563 #22	ENSGT00990000203541.b	ENSGT00600000085663	ENSGT01030000234637.b.c.g #37	ENSGT00940000164472.a.a.b.b.a.a.a.a	ENSGT00940000159855
Amazon molly	MODERN SPECIES	915												ENSPFOG00000000885	FGD1 (ENSPFOG00000001063)	TFE3 (ENSPFOG00000001499) #30	CXXC1 (ENSPFOG00000001601)	HDAC6 (ENSPFOG00000001762) #22	ENSPFOG00000001929	ENSPFOG00000024116	ENSPFOG00000020642	sypa (ENSPFOG00000001968) #37	ENSPFOG00000002119	ENSPFOG00000002355	ENSPFOG00000023194
Sailfin molly	MODERN SPECIES	2774															CXXC1 (ENSPLAG00000009949)	HDAC6 (ENSPLAG00000009957) #22	ENSPLAG00000009974
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000159563 #22
Hagfish	MODERN SPECIES	946	ENSEBUG00000006348	ENSEBUG00000002112	ENSEBUG00000009901	ENSEBUG00000013733	tbl1xr1a (ENSEBUG00000003035)	arpc4 (ENSEBUG00000008348)	cpne5a (ENSEBUG00000010662)	ENSEBUG00000001422	TBC1D22B (ENSEBUG00000011637)	ENSEBUG00000008771	ENSEBUG00000015530	ENSEBUG00000013232	pmpcb (ENSEBUG00000001846)	ENSEBUG00000005752	slc2a13b (ENSEBUG00000003317)	ENSEBUG00000012044 #22	ENSEBUG00000007203	ENSEBUG00000010668	ENSEBUG00000000612
Lamprey	MODERN SPECIES	1107																ENSPMAG00000006118 #22	ENSPMAG00000006207	ENSPMAG00000006248	ENSPMAG00000006269