Euteleostomi	ANCESTRAL SPECIES	223											ENSGT00940000156890.a.a #17	ENSGT01030000234815	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT00940000165559
Sarcopterygii	ANCESTRAL SPECIES	127											ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT00940000165559	ENSGT00940000179600	ENSGT00940000155250	ENSGT00940000159490	ENSGT00940000154256
Tetrapoda	ANCESTRAL SPECIES	26	ENSGT00940000160351 #9	ENSGT00530000063825.B	ENSGT00940000158956 #10	ENSGT00940000164002	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000166618	ENSGT00940000160422 #15	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Amniota	ANCESTRAL SPECIES	30	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00940000164002	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000166618	ENSGT00940000154766.a.b	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Mammalia	ANCESTRAL SPECIES	31	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT01050000247934	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Theria	ANCESTRAL SPECIES	2	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Primates	ANCESTRAL SPECIES	6	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609.a.a ##30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Mas night monkey	MODERN SPECIES	834	MARCHF9 (ENSANAG00000029912) #7	ENSANAG00000031497 #8	TSPAN31 (ENSANAG00000029017) #9	AGAP2 (ENSANAG00000038009) #10	OS9 (ENSANAG00000037858) #11	B4GALNT1 (ENSANAG00000034723) #12	ENSANAG00000037611 #13	ENSANAG00000025341 #14	ARHGEF25 (ENSANAG00000032997) #15	DTX3 (ENSANAG00000030171) #16	PIP4K2C (ENSANAG00000035409) #17	ENSANAG00000030488 #18	KIF5A (ENSANAG00000023467) #19	ENSANAG00000027286 #20	MBD6 (ENSANAG00000022147) #21	DDIT3 (ENSANAG00000028583) #22	MARS1 (ENSANAG00000027589) #23	ARHGAP9 (ENSANAG00000031679) #24	GLI1 (ENSANAG00000036406) #25	INHBE (ENSANAG00000017920) #26	INHBC (ENSANAG00000030083) #27	ENSANAG00000028861 #28	ENSANAG00000003027 #29	ENSANAG00000025397 #30	STAC3 (ENSANAG00000028717) #31	NDUFA4L2 (ENSANAG00000001542) #32	SHMT2 (ENSANAG00000028719) #33	NXPH4 (ENSANAG00000020215) #34	LRP1 (ENSANAG00000036648) #35	ENSANAG00000003990 #36	STAT6 (ENSANAG00000027232) #37
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609.a.a ##30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	21	MARCHF9 (ENSCJAG00000045412) #7	CDK4 (ENSCJAG00000006697) #8	TSPAN31 (ENSCJAG00000006760) #9	AGAP2 (ENSCJAG00000006784) #10	ENSCJAG00000076241	OS9 (ENSCJAG00000006838) #11	B4GALNT1 (ENSCJAG00000006905) #12	ENSCJAG00000064140 #14	ENSCJAG00000080590	ARHGEF25 (ENSCJAG00000006921) #15	DTX3 (ENSCJAG00000006966) #16	PIP4K2C (ENSCJAG00000006988) #17	KIF5A (ENSCJAG00000007033) #19	DCTN2 (ENSCJAG00000007091) #20	MBD6 (ENSCJAG00000007202) #21	ENSCJAG00000007243 #22	MARS1 (ENSCJAG00000007249) #23	ARHGAP9 (ENSCJAG00000007264) #24	GLI1 (ENSCJAG00000007324) #25	INHBE (ENSCJAG00000007356) #26	INHBC (ENSCJAG00000045679) #27	ENSCJAG00000007365 ##30	STAC3 (ENSCJAG00000037826) #31	NDUFA4L2 (ENSCJAG00000039126) #32	SHMT2 (ENSCJAG00000007438) #33	NXPH4 (ENSCJAG00000071109) #34	LRP1 (ENSCJAG00000010289) #35	ENSCJAG00000070274	ENSCJAG00000086164	STAT6 (ENSCJAG00000010327) #37	NAB2 (ENSCJAG00000010414)
Marmoset	MODERN SPECIES		TXN (ENSCJAG00000017321)	C9orf152 (ENSCJAG00000078080)	PALM2AKAP2 (ENSCJAG00000048660)	PTPN3 (ENSCJAG00000017223)	EPB41L4B (ENSCJAG00000017184)	FRRS1L (ENSCJAG00000017183)	ENSCJAG00000082132	TMEM245 (ENSCJAG00000017154)	CTNNAL1 (ENSCJAG00000017065)	ABITRAM (ENSCJAG00000038185)	ENSCJAG00000016966	ENSCJAG00000086076	ACTL7B (ENSCJAG00000047256)	ENSCJAG00000082635	ENSCJAG00000085762	ENSCJAG00000022553 #22	ENSCJAG00000080939	ENSCJAG00000078202	KLF4 (ENSCJAG00000016955)	ENSCJAG00000016908	ENSCJAG00000080716	ZNF462 (ENSCJAG00000016879)	ENSCJAG00000077394	ENSCJAG00000083978	ENSCJAG00000079374	ENSCJAG00000075250	ENSCJAG00000068530	TMEM38B (ENSCJAG00000058401)	TAL2 (ENSCJAG00000063376)	FKTN (ENSCJAG00000016840)	FSD1L (ENSCJAG00000016800)
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00940000158208 #7	ENSGT00940000154770.q.a.a.a.a #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609.a.a ##30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Bolivian squirrel monkey	MODERN SPECIES	60	ENSSBOG00000035238 #8	TSPAN31 (ENSSBOG00000020330) #9	AGAP2 (ENSSBOG00000015494) #10	OS9 (ENSSBOG00000028966) #11	ENSSBOG00000033815	B4GALNT1 (ENSSBOG00000027894) #12	ENSSBOG00000030939 #13	ENSSBOG00000028275 #14	ARHGEF25 (ENSSBOG00000024503) #15	DTX3 (ENSSBOG00000020773) #16	PIP4K2C (ENSSBOG00000033181) #17	ENSSBOG00000033928 #18	KIF5A (ENSSBOG00000027539) #19	DCTN2 (ENSSBOG00000034543) #20	MBD6 (ENSSBOG00000006917) #21	DDIT3 (ENSSBOG00000025810) #22	MARS1 (ENSSBOG00000022875) #23	ARHGAP9 (ENSSBOG00000025479) #24	GLI1 (ENSSBOG00000023889) #25	INHBE (ENSSBOG00000020369) #26	INHBC (ENSSBOG00000036100) #27	R3HDM2 (ENSSBOG00000023547) ##30	ENSSBOG00000036259 #31	NDUFA4L2 (ENSSBOG00000000521) #32	SHMT2 (ENSSBOG00000028812) #33	LRP1 (ENSSBOG00000033999) #35	STAT6 (ENSSBOG00000020733) #37	NAB2 (ENSSBOG00000021938)	NEMP1 (ENSSBOG00000036147)	MYO1A (ENSSBOG00000028972)	TAC3 (ENSSBOG00000032982)
Capuchin	MODERN SPECIES	96	CYP27B1 (ENSCCAG00000022326)	MARCHF9 (ENSCCAG00000017126) #7	ENSCCAG00000032223 #8	TSPAN31 (ENSCCAG00000023207) #9	AGAP2 (ENSCCAG00000030248) #10	OS9 (ENSCCAG00000030884) #11	B4GALNT1 (ENSCCAG00000026932) #12	ENSCCAG00000034534 #14	ARHGEF25 (ENSCCAG00000021234) #15	ENSCCAG00000034962 #16	ENSCCAG00000023779 #17	ENSCCAG00000035627 #18	KIF5A (ENSCCAG00000029255) #19	DCTN2 (ENSCCAG00000037079) #20	MBD6 (ENSCCAG00000030668) #21	DDIT3 (ENSCCAG00000030994) #22	MARS1 (ENSCCAG00000032206) #23	ARHGAP9 (ENSCCAG00000034302) #24	GLI1 (ENSCCAG00000026059) #25	INHBE (ENSCCAG00000036121) #26	INHBC (ENSCCAG00000031238) #27	R3HDM2 (ENSCCAG00000026083) ##30	STAC3 (ENSCCAG00000026123) #31	NDUFA4L2 (ENSCCAG00000023385) #32	SHMT2 (ENSCCAG00000032795) #33	NXPH4 (ENSCCAG00000021360) #34	LRP1 (ENSCCAG00000037240) #35	STAT6 (ENSCCAG00000021197) #37	NAB2 (ENSCCAG00000034977)	NEMP1 (ENSCCAG00000037438)	MYO1A (ENSCCAG00000028277)
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00910000147730	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00910000147730	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Pan	ANCESTRAL SPECIES	4	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000163244.d.b.a.a.b	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Bonobo	MODERN SPECIES	3	CYP27B1 (ENSPPAG00000031025)	ENSPPAG00000033727 #7	CDK4 (ENSPPAG00000036900) #8	TSPAN31 (ENSPPAG00000024342) #9	AGAP2 (ENSPPAG00000034874) #10	OS9 (ENSPPAG00000026298) #11	B4GALNT1 (ENSPPAG00000037931) #12	ENSPPAG00000042121 #14	ARHGEF25 (ENSPPAG00000043262) #15	DTX3 (ENSPPAG00000037059) #16	PIP4K2C (ENSPPAG00000037986) #17	KIF5A (ENSPPAG00000038022) #19	ENSPPAG00000024674 #18	DCTN2 (ENSPPAG00000003745) #20	MBD6 (ENSPPAG00000041542) #21	DDIT3 (ENSPPAG00000034304) #22	MARS1 (ENSPPAG00000025147) #23	ARHGAP9 (ENSPPAG00000043620) #24	GLI1 (ENSPPAG00000043144) #25	INHBE (ENSPPAG00000043103) #26	INHBC (ENSPPAG00000043139) #27	ENSPPAG00000020254	R3HDM2 (ENSPPAG00000034395) #30	STAC3 (ENSPPAG00000032152) #31	NDUFA4L2 (ENSPPAG00000041071) #32	SHMT2 (ENSPPAG00000033906) #33	NXPH4 (ENSPPAG00000004184) #34	LRP1 (ENSPPAG00000029361) #35	STAT6 (ENSPPAG00000029694) #37	NAB2 (ENSPPAG00000031480)	NEMP1 (ENSPPAG00000032473)
Chimpanzee	MODERN SPECIES	3	MARCHF9 (ENSPTRG00000005148) #7	CDK4 (ENSPTRG00000005147) #8	TSPAN31 (ENSPTRG00000005146) #9	AGAP2 (ENSPTRG00000005145) #10	OS9 (ENSPTRG00000005144) #11	B4GALNT1 (ENSPTRG00000005143) #12	SLC26A10 (ENSPTRG00000050038) #14	ARHGEF25 (ENSPTRG00000005142) #15	DTX3 (ENSPTRG00000005141) #16	PIP4K2C (ENSPTRG00000005140) #17	KIF5A (ENSPTRG00000005139) #19	ENSPTRG00000049678	ENSPTRG00000043238 #18	DCTN2 (ENSPTRG00000005138) #20	MBD6 (ENSPTRG00000039026) #21	DDIT3 (ENSPTRG00000022781) #22	MARS1 (ENSPTRG00000005135) #23	ARHGAP9 (ENSPTRG00000005134) #24	GLI1 (ENSPTRG00000005133) #25	INHBE (ENSPTRG00000005132) #26	INHBC (ENSPTRG00000005130) #27	ENSPTRG00000051409	R3HDM2 (ENSPTRG00000046457) #30	STAC3 (ENSPTRG00000005126) #31	NDUFA4L2 (ENSPTRG00000045465) #32	SHMT2 (ENSPTRG00000005124) #33	NXPH4 (ENSPTRG00000005123) #34	LRP1 (ENSPTRG00000005122) #35	STAT6 (ENSPTRG00000005121) #37	NAB2 (ENSPTRG00000005120)	NEMP1 (ENSPTRG00000005119)
Human	MODERN SPECIES	3	METTL1 (ENSG00000037897)	CYP27B1 (ENSG00000111012)	MARCHF9 (ENSG00000139266) #7	CDK4 (ENSG00000135446) #8	TSPAN31 (ENSG00000135452) #9	AGAP2 (ENSG00000135439) #10	OS9 (ENSG00000135506) #11	B4GALNT1 (ENSG00000135454) #12	ARHGEF25 (ENSG00000240771) #15	DTX3 (ENSG00000178498) #16	PIP4K2C (ENSG00000166908) #17	KIF5A (ENSG00000155980) #19	DCTN2 (ENSG00000175203) #20	MBD6 (ENSG00000166987) #21	ENSG00000285133	DDIT3 (ENSG00000175197) #22	MARS1 (ENSG00000166986) #23	ARHGAP9 (ENSG00000123329) #24	GLI1 (ENSG00000111087) #25	INHBE (ENSG00000139269) #26	INHBC (ENSG00000175189) #27	R3HDM2 (ENSG00000179912) #30	STAC3 (ENSG00000185482) #31	NDUFA4L2 (ENSG00000185633) #32	SHMT2 (ENSG00000182199) #33	NXPH4 (ENSG00000182379) #34	LRP1 (ENSG00000123384) #35	STAT6 (ENSG00000166888) #37	NAB2 (ENSG00000166886)	NEMP1 (ENSG00000166881)	MYO1A (ENSG00000166866)
Gorilla	MODERN SPECIES	3	CYP27B1 (ENSGGOG00000001409)	MARCHF9 (ENSGGOG00000001407) #7	CDK4 (ENSGGOG00000001404) #8	TSPAN31 (ENSGGOG00000022283) #9	AGAP2 (ENSGGOG00000001399) #10	OS9 (ENSGGOG00000001393) #11	B4GALNT1 (ENSGGOG00000006301) #12	SLC26A10 (ENSGGOG00000034835) #14	ARHGEF25 (ENSGGOG00000006284) #15	DTX3 (ENSGGOG00000003156) #16	PIP4K2C (ENSGGOG00000026749) #17	KIF5A (ENSGGOG00000001996) #19	ENSGGOG00000039203 #18	DCTN2 (ENSGGOG00000001991) #20	MBD6 (ENSGGOG00000001989) #21	DDIT3 (ENSGGOG00000001987) #22	MARS1 (ENSGGOG00000001982) #23	ARHGAP9 (ENSGGOG00000001977) #24	GLI1 (ENSGGOG00000001974) #25	INHBE (ENSGGOG00000002772) #26	INHBC (ENSGGOG00000022398) #27	R3HDM2 (ENSGGOG00000015007) #30	STAC3 (ENSGGOG00000010753) #31	NDUFA4L2 (ENSGGOG00000010249) #32	SHMT2 (ENSGGOG00000010240) #33	NXPH4 (ENSGGOG00000010235) #34	LRP1 (ENSGGOG00000010171) #35	STAT6 (ENSGGOG00000001424) #37	NAB2 (ENSGGOG00000001421)	NEMP1 (ENSGGOG00000013143)	MYO1A (ENSGGOG00000013125)
Orangutan	MODERN SPECIES	3	CYP27B1 (ENSPPYG00000004705)	MARCHF9 (ENSPPYG00000004704) #7	CDK4 (ENSPPYG00000004703) #8	TSPAN31 (ENSPPYG00000039091) #9	AGAP2 (ENSPPYG00000004701) #10	OS9 (ENSPPYG00000004700) #11	B4GALNT1 (ENSPPYG00000004699) #12	ENSPPYG00000032086 #14	ARHGEF25 (ENSPPYG00000004698) #15	DTX3 (ENSPPYG00000004697) #16	PIP4K2C (ENSPPYG00000004696) #17	KIF5A (ENSPPYG00000004695) #19	DCTN2 (ENSPPYG00000004694) #20	MBD6 (ENSPPYG00000004693) #21	ENSPPYG00000036117	DDIT3 (ENSPPYG00000036558) #22	MARS1 (ENSPPYG00000004691) #23	ARHGAP9 (ENSPPYG00000004690) #24	GLI1 (ENSPPYG00000004689) #25	INHBE (ENSPPYG00000034705) #26	INHBC (ENSPPYG00000032715) #27	R3HDM2 (ENSPPYG00000004685) #30	STAC3 (ENSPPYG00000033384) #31	ENSPPYG00000004684 #32	SHMT2 (ENSPPYG00000004683) #33	NXPH4 (ENSPPYG00000004682) #34	ENSPPYG00000041371 #35	STAT6 (ENSPPYG00000004680) #37	NAB2 (ENSPPYG00000004679)	NEMP1 (ENSPPYG00000004678)	MYO1A (ENSPPYG00000004677)
Gibbon	MODERN SPECIES	1	CYP27B1 (ENSNLEG00000017190)	MARCHF9 (ENSNLEG00000032051) #7	CDK4 (ENSNLEG00000017205) #8	TSPAN31 (ENSNLEG00000017218) #9	AGAP2 (ENSNLEG00000017220) #10	OS9 (ENSNLEG00000017232) #11	B4GALNT1 (ENSNLEG00000017250) #12	ENSNLEG00000017254 #14	ARHGEF25 (ENSNLEG00000017259) #15	DTX3 (ENSNLEG00000017271) #16	PIP4K2C (ENSNLEG00000017276) #17	ENSNLEG00000017285	KIF5A (ENSNLEG00000034703) #19	DCTN2 (ENSNLEG00000017286) #20	ENSNLEG00000017170 #21	DDIT3 (ENSNLEG00000017291) #22	MARS1 (ENSNLEG00000017297) #23	ARHGAP9 (ENSNLEG00000017320) #24	GLI1 (ENSNLEG00000017337) #25	INHBE (ENSNLEG00000017344) #26	INHBC (ENSNLEG00000017346) #27	R3HDM2 (ENSNLEG00000017351) #30	ENSNLEG00000032879	STAC3 (ENSNLEG00000028124) #31	NDUFA4L2 (ENSNLEG00000017371) #32	SHMT2 (ENSNLEG00000017373) #33	LRP1 (ENSNLEG00000030531) #35	STAT6 (ENSNLEG00000017396) #37	NAB2 (ENSNLEG00000017421)	NEMP1 (ENSNLEG00000017426)	MYO1A (ENSNLEG00000033040)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00910000147730	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00910000147730	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00910000147730	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b
Macaca	ANCESTRAL SPECIES	6	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00910000147433 #13	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Rhesus	MODERN SPECIES	2	METTL1 (ENSMMUG00000022148)	CYP27B1 (ENSMMUG00000022144)	MARCHF9 (ENSMMUG00000046540) #7	CDK4 (ENSMMUG00000023694) #8	TSPAN31 (ENSMMUG00000023691) #9	AGAP2 (ENSMMUG00000023690) #10	OS9 (ENSMMUG00000020710) #11	B4GALNT1 (ENSMMUG00000001182) #12	SLC26A10 (ENSMMUG00000001181) #14	ARHGEF25 (ENSMMUG00000031819) #15	DTX3 (ENSMMUG00000001180) #16	PIP4K2C (ENSMMUG00000001179) #17	KIF5A (ENSMMUG00000011297) #19	DCTN2 (ENSMMUG00000011292) #20	MBD6 (ENSMMUG00000011289) #21	DDIT3 (ENSMMUG00000011286) #22	MARS1 (ENSMMUG00000011277) #23	ARHGAP9 (ENSMMUG00000022060) #24	GLI1 (ENSMMUG00000022058) #25	INHBE (ENSMMUG00000001124) #26	R3HDM2 (ENSMMUG00000021789) #30	STAC3 (ENSMMUG00000021787) #31	NDUFA4L2 (ENSMMUG00000021786) #32	SHMT2 (ENSMMUG00000021785) #33	NXPH4 (ENSMMUG00000021784) #34	LRP1 (ENSMMUG00000021782) #35	STAT6 (ENSMMUG00000017527) #37	NAB2 (ENSMMUG00000017525)	NEMP1 (ENSMMUG00000019783)	MYO1A (ENSMMUG00000013518)	TAC3 (ENSMMUG00000003203)
Crab-eating macaque	MODERN SPECIES	2	MARCHF9 (ENSMFAG00000057711) #7	TSPAN31 (ENSMFAG00000030163) #9	AGAP2 (ENSMFAG00000000465) #10	CDK4 (ENSMFAG00000043769) #8	OS9 (ENSMFAG00000033882) #11	B4GALNT1 (ENSMFAG00000034688) #12	ENSMFAG00000042325 #14	ARHGEF25 (ENSMFAG00000043848) #15	DTX3 (ENSMFAG00000042770) #16	PIP4K2C (ENSMFAG00000040121) #17	ENSMFAG00000058268	ENSMFAG00000046000 #18	KIF5A (ENSMFAG00000038846) #19	DCTN2 (ENSMFAG00000001581) #20	MBD6 (ENSMFAG00000002085) #21	DDIT3 (ENSMFAG00000045278) #22	MARS1 (ENSMFAG00000010123) #23	ARHGAP9 (ENSMFAG00000039577) #24	GLI1 (ENSMFAG00000032745) #25	INHBE (ENSMFAG00000035874) #26	ENSMFAG00000055651	R3HDM2 (ENSMFAG00000036385) #30	NDUFA4L2 (ENSMFAG00000055308) #32	SHMT2 (ENSMFAG00000002112) #33	ENSMFAG00000042434 #34	LRP1 (ENSMFAG00000039927) #35	STAT6 (ENSMFAG00000036764) #37	NAB2 (ENSMFAG00000036629)	NEMP1 (ENSMFAG00000001688)	MYO1A (ENSMFAG00000044427)	TAC3 (ENSMFAG00000035535)
Pig-tailed macaque	MODERN SPECIES	526	TSPAN31 (ENSMNEG00000032135) #9	AGAP2 (ENSMNEG00000044301) #10	OS9 (ENSMNEG00000045314) #11	ENSMNEG00000039102	B4GALNT1 (ENSMNEG00000044537) #12	ENSMNEG00000037313 #14	ENSMNEG00000008865 #13	ARHGEF25 (ENSMNEG00000033217) #15	DTX3 (ENSMNEG00000022272) #16	PIP4K2C (ENSMNEG00000029241) #17	KIF5A (ENSMNEG00000035622) #19	ENSMNEG00000040712	ENSMNEG00000042894 #18	DCTN2 (ENSMNEG00000042396) #20	MBD6 (ENSMNEG00000039788) #21	DDIT3 (ENSMNEG00000000019) #22	MARS1 (ENSMNEG00000044464) #23	ARHGAP9 (ENSMNEG00000027506) #24	GLI1 (ENSMNEG00000036386) #25	INHBE (ENSMNEG00000040355) #26	INHBC (ENSMNEG00000043803) #27	R3HDM2 (ENSMNEG00000025314) #30	STAC3 (ENSMNEG00000035422) #31	NDUFA4L2 (ENSMNEG00000030349) #32	SHMT2 (ENSMNEG00000041793) #33	NXPH4 (ENSMNEG00000042450) #34	LRP1 (ENSMNEG00000032147) #35	STAT6 (ENSMNEG00000045129) #37	NAB2 (ENSMNEG00000028556)	NEMP1 (ENSMNEG00000023962)	MYO1A (ENSMNEG00000045540)
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00910000147730	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000166603	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b
Olive baboon	MODERN SPECIES	19	METTL1 (ENSPANG00000010683)	CYP27B1 (ENSPANG00000007190)	MARCHF9 (ENSPANG00000022647) #7	CDK4 (ENSPANG00000018113) #8	TSPAN31 (ENSPANG00000009254) #9	AGAP2 (ENSPANG00000012661) #10	OS9 (ENSPANG00000004849) #11	B4GALNT1 (ENSPANG00000002379) #12	ENSPANG00000013233 #14	ARHGEF25 (ENSPANG00000024375) #15	DTX3 (ENSPANG00000010684) #16	ENSPANG00000011243 #17	KIF5A (ENSPANG00000024424) #19	DCTN2 (ENSPANG00000004647) #20	MBD6 (ENSPANG00000017043) #21	DDIT3 (ENSPANG00000024001) #22	MARS1 (ENSPANG00000009140) #23	ARHGAP9 (ENSPANG00000007867) #24	GLI1 (ENSPANG00000017044) #25	INHBE (ENSPANG00000030880) #26	INHBC (ENSPANG00000012538) #27	R3HDM2 (ENSPANG00000024002) #30	STAC3 (ENSPANG00000002380) #31	NDUFA4L2 (ENSPANG00000004071) #32	SHMT2 (ENSPANG00000009141) #33	NXPH4 (ENSPANG00000042378) #34	ENSPANG00000013191	ENSPANG00000048911 #35	STAT6 (ENSPANG00000024919) #37	NAB2 (ENSPANG00000004072)	NEMP1 (ENSPANG00000022961)
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000245729	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00910000147730	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Sooty mangabey	MODERN SPECIES	117	CDK4 (ENSCATG00000017600) #8	TSPAN31 (ENSCATG00000043074) #9	AGAP2 (ENSCATG00000012954) #10	OS9 (ENSCATG00000043112) #11	B4GALNT1 (ENSCATG00000042850) #12	ENSCATG00000033258 #14	ENSCATG00000022770 #13	ARHGEF25 (ENSCATG00000043971) #15	DTX3 (ENSCATG00000031460) #16	PIP4K2C (ENSCATG00000037606) #17	ENSCATG00000038958	KIF5A (ENSCATG00000038773) #19	ENSCATG00000034874 #18	DCTN2 (ENSCATG00000041971) #20	MBD6 (ENSCATG00000043813) #21	DDIT3 (ENSCATG00000026856) #22	MARS1 (ENSCATG00000038907) #23	ARHGAP9 (ENSCATG00000030738) #24	GLI1 (ENSCATG00000043934) #25	INHBE (ENSCATG00000034937) #26	INHBC (ENSCATG00000018060) #27	R3HDM2 (ENSCATG00000036929) #30	ENSCATG00000034566	STAC3 (ENSCATG00000035065) #31	NDUFA4L2 (ENSCATG00000042967) #32	SHMT2 (ENSCATG00000043563) #33	NXPH4 (ENSCATG00000035691) #34	LRP1 (ENSCATG00000044497) #35	STAT6 (ENSCATG00000040616) #37	NAB2 (ENSCATG00000023506)	NEMP1 (ENSCATG00000039924)
Drill	MODERN SPECIES	983	CDK4 (ENSMLEG00000037320) #8	TSPAN31 (ENSMLEG00000038898) #9	AGAP2 (ENSMLEG00000044212) #10	OS9 (ENSMLEG00000011596) #11	B4GALNT1 (ENSMLEG00000037108) #12	ENSMLEG00000021034 #13	ENSMLEG00000043030 #14	ARHGEF25 (ENSMLEG00000037870) #15	DTX3 (ENSMLEG00000041563) #16	PIP4K2C (ENSMLEG00000035988) #17	ENSMLEG00000034185	ENSMLEG00000034126 #18	KIF5A (ENSMLEG00000032609) #19	DCTN2 (ENSMLEG00000038960) #20	MBD6 (ENSMLEG00000030542) #21	DDIT3 (ENSMLEG00000034327) #22	MARS1 (ENSMLEG00000034638) #23	ARHGAP9 (ENSMLEG00000038224) #24	GLI1 (ENSMLEG00000043106) #25	INHBE (ENSMLEG00000044461) #26	INHBC (ENSMLEG00000031555) #27	ENSMLEG00000031276	R3HDM2 (ENSMLEG00000028915) #30	STAC3 (ENSMLEG00000043319) #31	NDUFA4L2 (ENSMLEG00000032629) #32	SHMT2 (ENSMLEG00000031792) #33	NXPH4 (ENSMLEG00000031215) #34	LRP1 (ENSMLEG00000039373) #35	STAT6 (ENSMLEG00000038113) #37	NAB2 (ENSMLEG00000015890)	NEMP1 (ENSMLEG00000030213)
Vervet Monkey	MODERN SPECIES	2	METTL1 (ENSCSAG00000004611)	CYP27B1 (ENSCSAG00000004618)	MARCHF9 (ENSCSAG00000004626) #7	CDK4 (ENSCSAG00000004632) #8	TSPAN31 (ENSCSAG00000004636) #9	AGAP2 (ENSCSAG00000004659) #10	OS9 (ENSCSAG00000004671) #11	B4GALNT1 (ENSCSAG00000004682) #12	ENSCSAG00000004712 #14	ARHGEF25 (ENSCSAG00000004726) #15	DTX3 (ENSCSAG00000004736) #16	PIP4K2C (ENSCSAG00000004746) #17	KIF5A (ENSCSAG00000004788) #19	DCTN2 (ENSCSAG00000004807) #20	MBD6 (ENSCSAG00000004813) #21	DDIT3 (ENSCSAG00000004816) #22	MARS1 (ENSCSAG00000004852) #23	ARHGAP9 (ENSCSAG00000004886) #24	GLI1 (ENSCSAG00000004897) #25	INHBE (ENSCSAG00000004900) #26	INHBC (ENSCSAG00000004904) #27	R3HDM2 (ENSCSAG00000004911) #30	STAC3 (ENSCSAG00000004918) #31	NDUFA4L2 (ENSCSAG00000004922) #32	SHMT2 (ENSCSAG00000004929) #33	NXPH4 (ENSCSAG00000004932) #34	LRP1 (ENSCSAG00000004953) #35	STAT6 (ENSCSAG00000004973) #37	NAB2 (ENSCSAG00000004977)	NEMP1 (ENSCSAG00000004982)	MYO1A (ENSCSAG00000004990)
Rhinopithecus	ANCESTRAL SPECIES	127	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00910000147730	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Black snub-nosed monkey	MODERN SPECIES	1949							B4GALNT1 (ENSRBIG00000032137) #12	ENSRBIG00000010753 #14	ARHGEF25 (ENSRBIG00000026665) #15	DTX3 (ENSRBIG00000027657) #16	PIP4K2C (ENSRBIG00000035466) #17	KIF5A (ENSRBIG00000034491) #19	ENSRBIG00000043261 #18	DCTN2 (ENSRBIG00000030962) #20	ENSRBIG00000038599 #21	DDIT3 (ENSRBIG00000041025) #22	MARS1 (ENSRBIG00000044782) #23	ARHGAP9 (ENSRBIG00000031786) #24	GLI1 (ENSRBIG00000040942) #25	INHBE (ENSRBIG00000037399) #26	INHBC (ENSRBIG00000011547) #27	R3HDM2 (ENSRBIG00000037403) #30	STAC3 (ENSRBIG00000034679) #31	NDUFA4L2 (ENSRBIG00000038887) #32	SHMT2 (ENSRBIG00000043418) #33	NXPH4 (ENSRBIG00000030970) #34	LRP1 (ENSRBIG00000031970) #35	STAT6 (ENSRBIG00000029309) #37	NAB2 (ENSRBIG00000043015)	NEMP1 (ENSRBIG00000030695)	MYO1A (ENSRBIG00000042917)
Golden snub-nosed monkey	MODERN SPECIES	2709	CYP27B1 (ENSRROG00000021316)	MARCHF9 (ENSRROG00000036411) #7	CDK4 (ENSRROG00000029986) #8	TSPAN31 (ENSRROG00000028862) #9	AGAP2 (ENSRROG00000022063) #10	OS9 (ENSRROG00000012909) #11	B4GALNT1 (ENSRROG00000032117) #12	ENSRROG00000043251 #14	ARHGEF25 (ENSRROG00000037976) #15	DTX3 (ENSRROG00000042632) #16	PIP4K2C (ENSRROG00000043215) #17	KIF5A (ENSRROG00000031394) #19	ENSRROG00000037835 #18	DCTN2 (ENSRROG00000038229) #20	MBD6 (ENSRROG00000043452) #21	DDIT3 (ENSRROG00000025508) #22	MARS1 (ENSRROG00000042331) #23	ARHGAP9 (ENSRROG00000045516) #24	GLI1 (ENSRROG00000034423) #25	INHBE (ENSRROG00000033301) #26	INHBC (ENSRROG00000041884) #27	R3HDM2 (ENSRROG00000022271) #30	ENSRROG00000029942	STAC3 (ENSRROG00000027442) #31	NDUFA4L2 (ENSRROG00000028827) #32	SHMT2 (ENSRROG00000045290) #33	NXPH4 (ENSRROG00000027185) #34	LRP1 (ENSRROG00000039596) #35	STAT6 (ENSRROG00000032957) #37	NAB2 (ENSRROG00000040837)	NEMP1 (ENSRROG00000032779)
Tarsier	MODERN SPECIES	4918						AGAP2 (ENSTSYG00000025413) #10	OS9 (ENSTSYG00000002796) #11	B4GALNT1 (ENSTSYG00000002183) #12	ENSTSYG00000030748 #14	ARHGEF25 (ENSTSYG00000011046) #15	DTX3 (ENSTSYG00000030838) #16	PIP4K2C (ENSTSYG00000032130) #17	KIF5A (ENSTSYG00000010478) #19	DCTN2 (ENSTSYG00000010476) #20	MBD6 (ENSTSYG00000034137) #21	DDIT3 (ENSTSYG00000005201) #22	MARS (ENSTSYG00000005193) #23	ARHGAP9 (ENSTSYG00000001485) #24	GLI1 (ENSTSYG00000029258) #25	INHBE (ENSTSYG00000002579) #26	INHBC (ENSTSYG00000014323) #27
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Mouse lemur	MODERN SPECIES	29	CYP27B1 (ENSMICG00000037335)	MARCHF9 (ENSMICG00000003794) #7	CDK4 (ENSMICG00000003789) #8	TSPAN31 (ENSMICG00000003778) #9	AGAP2 (ENSMICG00000003757) #10	OS9 (ENSMICG00000003746) #11	B4GALNT1 (ENSMICG00000005532) #12	ENSMICG00000032199 #14	ARHGEF25 (ENSMICG00000005518) #15	DTX3 (ENSMICG00000005515) #16	PIP4K2C (ENSMICG00000005508) #17	ENSMICG00000036038 #18	KIF5A (ENSMICG00000005480) #19	DCTN2 (ENSMICG00000005467) #20	MBD6 (ENSMICG00000005436) #21	DDIT3 (ENSMICG00000005434) #22	MARS1 (ENSMICG00000032056) #23	ARHGAP9 (ENSMICG00000005391) #24	GLI1 (ENSMICG00000034549) #25	INHBE (ENSMICG00000005375) #26	INHBC (ENSMICG00000043104) #27	R3HDM2 (ENSMICG00000012389) #30	STAC3 (ENSMICG00000012382) #31	NDUFA4L2 (ENSMICG00000034473) #32	SHMT2 (ENSMICG00000012350) #33	NXPH4 (ENSMICG00000033243) #34	LRP1 (ENSMICG00000012273) #35	STAT6 (ENSMICG00000009087) #37	NAB2 (ENSMICG00000047570)	NEMP1 (ENSMICG00000009074)	MYO1A (ENSMICG00000009059)
Lemuriformes_a	ANCESTRAL SPECIES	27	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Greater bamboo lemur	MODERN SPECIES	128	CDK4 (ENSPSMG00000020948) #8	TSPAN31 (ENSPSMG00000021008) #9	AGAP2 (ENSPSMG00000021106) #10	OS9 (ENSPSMG00000021521) #11	B4GALNT1 (ENSPSMG00000021768) #12	ENSPSMG00000021787 #14	ENSPSMG00000021793 #14	ARHGEF25 (ENSPSMG00000021839) #15	DTX3 (ENSPSMG00000021883) #16	PIP4K2C (ENSPSMG00000021908) #17	KIF5A (ENSPSMG00000022094) #19	ENSPSMG00000022202 #18	DCTN2 (ENSPSMG00000022333) #20	MBD6 (ENSPSMG00000022511) #21	ENSPSMG00000022521	DDIT3 (ENSPSMG00000022525) #22	MARS1 (ENSPSMG00000022628) #23	ARHGAP9 (ENSPSMG00000022761) #24	GLI1 (ENSPSMG00000022812) #25	INHBE (ENSPSMG00000022816) #26	INHBC (ENSPSMG00000022819) #27	R3HDM2 (ENSPSMG00000023044) #30	STAC3 (ENSPSMG00000023166) #31	NDUFA4L2 (ENSPSMG00000023172) #32	SHMT2 (ENSPSMG00000023192) #33	NXPH4 (ENSPSMG00000023199) #34	LRP1 (ENSPSMG00000023233) #35	STAT6 (ENSPSMG00000023272) #37	NAB2 (ENSPSMG00000023295)	NEMP1 (ENSPSMG00000023310)	MYO1A (ENSPSMG00000023326)
Coquerels sifaka	MODERN SPECIES	91	CYP27B1 (ENSPCOG00000021833)	MARCHF9 (ENSPCOG00000016544) #7	CDK4 (ENSPCOG00000005477) #8	TSPAN31 (ENSPCOG00000025655) #9	AGAP2 (ENSPCOG00000022820) #10	OS9 (ENSPCOG00000028286) #11	B4GALNT1 (ENSPCOG00000027771) #12	ENSPCOG00000015531 #14	ARHGEF25 (ENSPCOG00000013968) #15	DTX3 (ENSPCOG00000018782) #16	PIP4K2C (ENSPCOG00000017884) #17	ENSPCOG00000025971 #18	KIF5A (ENSPCOG00000024872) #19	DCTN2 (ENSPCOG00000026517) #20	MBD6 (ENSPCOG00000016659) #21	DDIT3 (ENSPCOG00000016792) #22	MARS1 (ENSPCOG00000017598) #23	ARHGAP9 (ENSPCOG00000019995) #24	GLI1 (ENSPCOG00000017480) #25	INHBE (ENSPCOG00000013151) #26	INHBC (ENSPCOG00000019052) #27	R3HDM2 (ENSPCOG00000013201) #30	STAC3 (ENSPCOG00000027812) #31	NDUFA4L2 (ENSPCOG00000019477) #32	SHMT2 (ENSPCOG00000024293) #33	NXPH4 (ENSPCOG00000016192) #34	LRP1 (ENSPCOG00000028198) #35	STAT6 (ENSPCOG00000014408) #37	NAB2 (ENSPCOG00000016530)	NEMP1 (ENSPCOG00000016183)	MYO1A (ENSPCOG00000015135)
Bushbaby	MODERN SPECIES	158	METTL1 (ENSOGAG00000014384)	CYP27B1 (ENSOGAG00000014379)	MARCHF9 (ENSOGAG00000034768) #7	CDK4 (ENSOGAG00000014371) #8	TSPAN31 (ENSOGAG00000026424) #9	AGAP2 (ENSOGAG00000001669) #10	OS9 (ENSOGAG00000014368) #11	B4GALNT1 (ENSOGAG00000005253) #12	ENSOGAG00000025974 #14	ARHGEF25 (ENSOGAG00000034795) #15	DTX3 (ENSOGAG00000033293) #16	PIP4K2C (ENSOGAG00000025918) #17	KIF5A (ENSOGAG00000005238) #19	DCTN2 (ENSOGAG00000005235) #20	MBD6 (ENSOGAG00000005233) #21	DDIT3 (ENSOGAG00000005231) #22	MARS1 (ENSOGAG00000005226) #23	ARHGAP9 (ENSOGAG00000005222) #24	GLI1 (ENSOGAG00000005219) #25	INHBE (ENSOGAG00000005217) #26	INHBC (ENSOGAG00000005212) #27	ENSOGAG00000012055 #30	STAC3 (ENSOGAG00000012053) #31	NDUFA4L2 (ENSOGAG00000034520) #32	SHMT2 (ENSOGAG00000001857) #33	NXPH4 (ENSOGAG00000031405) #34	LRP1 (ENSOGAG00000012030) #35	STAT6 (ENSOGAG00000005002) #37	NAB2 (ENSOGAG00000025043)	ENSOGAG00000024444	NEMP1 (ENSOGAG00000013820)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Glires	ANCESTRAL SPECIES	4	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Kangaroo rat	MODERN SPECIES	322	Mettl1 (ENSDORG00000007270)	Cyp27b1 (ENSDORG00000007269)	Marchf9 (ENSDORG00000007268) #7	Cdk4 (ENSDORG00000007267) #8	Tspan31 (ENSDORG00000007266) #9	Agap2 (ENSDORG00000007265) #10	Os9 (ENSDORG00000007263) #11	B4galnt1 (ENSDORG00000004816) #12	Slc26a10 (ENSDORG00000027396) #14	Arhgef25 (ENSDORG00000014405) #15	Dtx3 (ENSDORG00000000412) #16	Pip4k2c (ENSDORG00000026517) #17	Kif5a (ENSDORG00000007141) #19	Dctn2 (ENSDORG00000007137) #20	Mbd6 (ENSDORG00000007136) #21	Ddit3 (ENSDORG00000007132) #22	Mars1 (ENSDORG00000007127) #23	Arhgap9 (ENSDORG00000007126) #24	Gli1 (ENSDORG00000007124) #25	Inhbe (ENSDORG00000007123) #26	Inhbc (ENSDORG00000000632) #27	R3hdm2 (ENSDORG00000011462) #30	Stac3 (ENSDORG00000011461) #31	Ndufa4l2 (ENSDORG00000024207) #32	Shmt2 (ENSDORG00000011460) #33	Nxph4 (ENSDORG00000012565) #34	Lrp1 (ENSDORG00000012553) #35	Stat6 (ENSDORG00000012548) #37	Nab2 (ENSDORG00000029120)	Nemp1 (ENSDORG00000013953)	Myo1a (ENSDORG00000001275)
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	1252	Mettl1 (ENSNGAG00000013035)	Cyp27b1 (ENSNGAG00000016787)	Marchf9 (ENSNGAG00000018675) #7	Cdk4 (ENSNGAG00000011709) #8	ENSNGAG00000018815 #9	Agap2 (ENSNGAG00000019298) #10	Os9 (ENSNGAG00000001426) #11	B4galnt1 (ENSNGAG00000010764) #12	Slc26a10 (ENSNGAG00000007258) #14	Arhgef25 (ENSNGAG00000017593) #15	Dtx3 (ENSNGAG00000005639) #16	Pip4k2c (ENSNGAG00000018449) #17	Kif5a (ENSNGAG00000006172) #19	Dctn2 (ENSNGAG00000020864) #20	Mbd6 (ENSNGAG00000004286) #21	ENSNGAG00000017151 #22	Mars1 (ENSNGAG00000018824) #23	Arhgap9 (ENSNGAG00000006996) #24	Gli1 (ENSNGAG00000013962) #25	Inhbe (ENSNGAG00000006351) #26	Inhbc (ENSNGAG00000009424) #27	R3hdm2 (ENSNGAG00000018800) #30	Stac3 (ENSNGAG00000013604) #31	Ndufa4l2 (ENSNGAG00000015083) #32	Shmt2 (ENSNGAG00000015828) #33	Nxph4 (ENSNGAG00000016424) #34	Lrp1 (ENSNGAG00000010123) #35	Stat6 (ENSNGAG00000005249) #37	Nab2 (ENSNGAG00000011502)	Nemp1 (ENSNGAG00000018516)	Myo1a (ENSNGAG00000010469)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1819														Tdrd3 (ENSNGAG00000004523)	Diaph3 (ENSNGAG00000016648)	ENSNGAG00000008377 #22	Pcdh17 (ENSNGAG00000009670)
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000154770.w.b #8	ENSGT00940000154770.w.a #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770.w.a #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Chinese hamster chok1gshd	MODERN SPECIES	352	Mettl1 (ENSCGRG00001017652)	Cyp27b1 (ENSCGRG00001021985)	Marchf9 (ENSCGRG00001012220) #7	ENSCGRG00001014084 #8	Tspan31 (ENSCGRG00001020219) #9	Agap2 (ENSCGRG00001013372) #10	Os9 (ENSCGRG00001020659) #11	B4galnt1 (ENSCGRG00001003379) #12	Slc26a10 (ENSCGRG00001023769) #14	Arhgef25 (ENSCGRG00001022612) #15	Dtx3 (ENSCGRG00001000914) #16	Pip4k2c (ENSCGRG00001011872) #17	Kif5a (ENSCGRG00001017636) #19	Dctn2 (ENSCGRG00001015007) #20	Mbd6 (ENSCGRG00001017943) #21	Ddit3 (ENSCGRG00001015590) #22	Mars1 (ENSCGRG00001019238) #23	Arhgap9 (ENSCGRG00001021134) #24	Gli1 (ENSCGRG00001019686) #25	Inhbe (ENSCGRG00001023439) #26	Inhbc (ENSCGRG00001017014) #27	R3hdm2 (ENSCGRG00001017324) #30	Stac3 (ENSCGRG00001021668) #31	Ndufa4l2 (ENSCGRG00001021531) #32	Shmt2 (ENSCGRG00001018472) #33	Nxph4 (ENSCGRG00001014648) #34	Lrp1 (ENSCGRG00001011627) #35	ENSCGRG00001002945	Stat6 (ENSCGRG00001020526) #37	Nab2 (ENSCGRG00001018114)	Nemp1 (ENSCGRG00001014268)
Cricetidae_B	ANCESTRAL SPECIES	35	ENSGT00940000158208 #7	ENSGT00940000154770.w.a #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Prairie vole	MODERN SPECIES	10	Mettl1 (ENSMOCG00000020233)	Cyp27b1 (ENSMOCG00000018353)	Marchf9 (ENSMOCG00000002354) #7	ENSMOCG00000008699 #8	Tspan31 (ENSMOCG00000012333) #9	Agap2 (ENSMOCG00000015636) #10	Os9 (ENSMOCG00000004512) #11	B4galnt1 (ENSMOCG00000020319) #12	Slc26a10 (ENSMOCG00000003649) #14	Arhgef25 (ENSMOCG00000013132) #15	Dtx3 (ENSMOCG00000010598) #16	Pip4k2c (ENSMOCG00000014405) #17	Kif5a (ENSMOCG00000004701) #19	Dctn2 (ENSMOCG00000000594) #20	Mbd6 (ENSMOCG00000012812) #21	Ddit3 (ENSMOCG00000002751) #22	Mars1 (ENSMOCG00000010941) #23	Arhgap9 (ENSMOCG00000002227) #24	Gli1 (ENSMOCG00000015523) #25	Inhbe (ENSMOCG00000021734) #26	Inhbc (ENSMOCG00000001463) #27	R3hdm2 (ENSMOCG00000014425) #30	Stac3 (ENSMOCG00000014255) #31	Ndufa4l2 (ENSMOCG00000005415) #32	Shmt2 (ENSMOCG00000006177) #33	Nxph4 (ENSMOCG00000020468) #34	ENSMOCG00000000670 #35	ENSMOCG00000021063	Stat6 (ENSMOCG00000003830) #37	Nab2 (ENSMOCG00000020714)	Nemp1 (ENSMOCG00000011584)
Northern American deer mouse	MODERN SPECIES	9	ENSPEMG00000015354 #8	Tspan31 (ENSPEMG00000000054) #9	Agap2 (ENSPEMG00000017050) #10	Os9 (ENSPEMG00000015919) #11	B4galnt1 (ENSPEMG00000015244) #12	ENSPEMG00000025878 #14	ENSPEMG00000013550 #14	Arhgef25 (ENSPEMG00000011625) #15	Dtx3 (ENSPEMG00000010078) #16	Pip4k2c (ENSPEMG00000009463) #17	Kif5a (ENSPEMG00000007193) #19	ENSPEMG00000024880 #18	Dctn2 (ENSPEMG00000003096) #20	Mbd6 (ENSPEMG00000000952) #21	Ddit3 (ENSPEMG00000025876)	Ddit3 (ENSPEMG00000000565) #22	Mars1 (ENSPEMG00000000046) #23	Arhgap9 (ENSPEMG00000018745) #24	Gli1 (ENSPEMG00000018514) #25	Inhbe (ENSPEMG00000028054) #26	Inhbc (ENSPEMG00000017942) #27	R3hdm2 (ENSPEMG00000015964) #30	Stac3 (ENSPEMG00000016520) #31	Ndufa4l2 (ENSPEMG00000025310) #32	Shmt2 (ENSPEMG00000015669) #33	Nxph4 (ENSPEMG00000014406) #34	Lrp1 (ENSPEMG00000015988) #35	Stat6 (ENSPEMG00000006873) #37	Nab2 (ENSPEMG00000003067)	Nemp1 (ENSPEMG00000000349)	Myo1a (ENSPEMG00000018549)
Murinae	ANCESTRAL SPECIES	22	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Mus	ANCESTRAL SPECIES	23	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Mouse	MODERN SPECIES	1	Mettl1 (ENSMUSG00000006732)	Cyp27b1 (ENSMUSG00000006724)	Marchf9 (ENSMUSG00000040502) #7	Cdk4 (ENSMUSG00000006728) #8	Tspan31 (ENSMUSG00000006736) #9	Agap2 (ENSMUSG00000025422) #10	Os9 (ENSMUSG00000040462) #11	B4galnt1 (ENSMUSG00000006731) #12	Slc26a10 (ENSMUSG00000040441) #14	Arhgef25 (ENSMUSG00000019467) #15	Dtx3 (ENSMUSG00000040415) #16	Pip4k2c (ENSMUSG00000025417) #17	Kif5a (ENSMUSG00000074657) #19	Dctn2 (ENSMUSG00000025410) #20	Mbd6 (ENSMUSG00000025409) #21	Ddit3 (ENSMUSG00000025408) #22	Ddit3 (ENSMUSG00000116429)	Mars1 (ENSMUSG00000040354) #23	Arhgap9 (ENSMUSG00000040345) #24	Gli1 (ENSMUSG00000025407) #25	Inhbe (ENSMUSG00000047492) #26	Inhbc (ENSMUSG00000025405) #27	R3hdm2 (ENSMUSG00000025404) #30	Stac3 (ENSMUSG00000040287) #31	Ndufa4l2 (ENSMUSG00000040280) #32	Shmt2 (ENSMUSG00000025403) #33	Nxph4 (ENSMUSG00000040258) #34	Lrp1 (ENSMUSG00000040249) #35	Stat6 (ENSMUSG00000002147) #37	Nab2 (ENSMUSG00000025402)	Nemp1 (ENSMUSG00000040195)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
spretus	MODERN SPECIES	1	Mettl1 (MGP_SPRETEiJ_G0016701)	Cyp27b1 (MGP_SPRETEiJ_G0016702)	Marchf9 (MGP_SPRETEiJ_G0016703) #7	Cdk4 (MGP_SPRETEiJ_G0016704) #8	Tspan31 (MGP_SPRETEiJ_G0016705) #9	Agap2 (MGP_SPRETEiJ_G0016706) #10	Os9 (MGP_SPRETEiJ_G0016707) #11	B4galnt1 (MGP_SPRETEiJ_G0016708) #12	Slc26a10 (MGP_SPRETEiJ_G0016709) #14	Arhgef25 (MGP_SPRETEiJ_G0016710) #15	Dtx3 (MGP_SPRETEiJ_G0016711) #16	Pip4k2c (MGP_SPRETEiJ_G0016712) #17	Kif5a (MGP_SPRETEiJ_G0016713) #19	Dctn2 (MGP_SPRETEiJ_G0016714) #20	Mbd6 (MGP_SPRETEiJ_G0016715) #21	Ddit3 (MGP_SPRETEiJ_G0016716) #22	Mars1 (MGP_SPRETEiJ_G0016717) #23	MGP_SPRETEiJ_G0016718 #24	Gli1 (MGP_SPRETEiJ_G0016719) #25	Inhbe (MGP_SPRETEiJ_G0016720) #26	Inhbc (MGP_SPRETEiJ_G0016721) #27	R3hdm2 (MGP_SPRETEiJ_G0016722) #30	Stac3 (MGP_SPRETEiJ_G0016723) #31	Ndufa4l2 (MGP_SPRETEiJ_G0016724) #32	Shmt2 (MGP_SPRETEiJ_G0016725) #33	Nxph4 (MGP_SPRETEiJ_G0016726) #34	Lrp1 (MGP_SPRETEiJ_G0016727) #35	Stat6 (MGP_SPRETEiJ_G0016728) #37	Nab2 (MGP_SPRETEiJ_G0016729)	Myo1a (MGP_SPRETEiJ_G0016731)	Tac2 (MGP_SPRETEiJ_G0016732)
Steppe mouse	MODERN SPECIES	413																Ddit3 (ENSMSIG00000002353) #22
Ryukyu mouse	MODERN SPECIES	1	Mettl1 (MGP_CAROLIEiJ_G0015875)	Cyp27b1 (MGP_CAROLIEiJ_G0015876)	Marchf9 (MGP_CAROLIEiJ_G0015877) #7	Cdk4 (MGP_CAROLIEiJ_G0015878) #8	Tspan31 (MGP_CAROLIEiJ_G0015879) #9	Agap2 (MGP_CAROLIEiJ_G0015880) #10	Os9 (MGP_CAROLIEiJ_G0015881) #11	B4galnt1 (MGP_CAROLIEiJ_G0015882) #12	Slc26a10 (MGP_CAROLIEiJ_G0015883) #14	Arhgef25 (MGP_CAROLIEiJ_G0015884) #15	Dtx3 (MGP_CAROLIEiJ_G0015885) #16	Pip4k2c (MGP_CAROLIEiJ_G0015886) #17	Kif5a (MGP_CAROLIEiJ_G0015887) #19	Dctn2 (MGP_CAROLIEiJ_G0015888) #20	Mbd6 (MGP_CAROLIEiJ_G0015889) #21	Ddit3 (MGP_CAROLIEiJ_G0015890) #22	Mars1 (MGP_CAROLIEiJ_G0015891) #23	MGP_CAROLIEiJ_G0015892 #24	Gli1 (MGP_CAROLIEiJ_G0015893) #25	Inhbe (MGP_CAROLIEiJ_G0015894) #26	Inhbc (MGP_CAROLIEiJ_G0015895) #27	R3hdm2 (MGP_CAROLIEiJ_G0015896) #30	Stac3 (MGP_CAROLIEiJ_G0015897) #31	Ndufa4l2 (MGP_CAROLIEiJ_G0015898) #32	Shmt2 (MGP_CAROLIEiJ_G0015899) #33	Nxph4 (MGP_CAROLIEiJ_G0015900) #34	Lrp1 (MGP_CAROLIEiJ_G0015901) #35	Stat6 (MGP_CAROLIEiJ_G0015902) #37	Nab2 (MGP_CAROLIEiJ_G0015903)	Nemp1 (MGP_CAROLIEiJ_G0015904)	Myo1a (MGP_CAROLIEiJ_G0015905)
Shrew mouse	MODERN SPECIES	22	Mettl1 (MGP_PahariEiJ_G0031210)	Cyp27b1 (MGP_PahariEiJ_G0031209)	Marchf9 (MGP_PahariEiJ_G0031208) #7	Cdk4 (MGP_PahariEiJ_G0031207) #8	Tspan31 (MGP_PahariEiJ_G0031206) #9	Agap2 (MGP_PahariEiJ_G0031205) #10	Os9 (MGP_PahariEiJ_G0031204) #11	B4galnt1 (MGP_PahariEiJ_G0031203) #12	Slc26a10 (MGP_PahariEiJ_G0031202) #14	Arhgef25 (MGP_PahariEiJ_G0031201) #15	Dtx3 (MGP_PahariEiJ_G0031200) #16	Pip4k2c (MGP_PahariEiJ_G0031199) #17	Kif5a (MGP_PahariEiJ_G0031198) #19	Dctn2 (MGP_PahariEiJ_G0031197) #20	Mbd6 (MGP_PahariEiJ_G0031196) #21	Ddit3 (MGP_PahariEiJ_G0031195) #22	Mars1 (MGP_PahariEiJ_G0031194) #23	MGP_PahariEiJ_G0031193 #24	Gli1 (MGP_PahariEiJ_G0031192) #25	Inhbe (MGP_PahariEiJ_G0031191) #26	Inhbc (MGP_PahariEiJ_G0031190) #27	R3hdm2 (MGP_PahariEiJ_G0031189) #30	Stac3 (MGP_PahariEiJ_G0031188) #31	Ndufa4l2 (MGP_PahariEiJ_G0031187) #32	Shmt2 (MGP_PahariEiJ_G0031186) #33	Nxph4 (MGP_PahariEiJ_G0031185) #34	Lrp1 (MGP_PahariEiJ_G0031184) #35	Stat6 (MGP_PahariEiJ_G0031183) #37	Nab2 (MGP_PahariEiJ_G0031182)	Nemp1 (MGP_PahariEiJ_G0031181)	Myo1a (MGP_PahariEiJ_G0031180)
Rat	MODERN SPECIES	17	AABR07057423.1 (ENSRNOG00000046245) #7	Cdk4 (ENSRNOG00000025602) #8	Tspan31 (ENSRNOG00000025592) #9	Agap2 (ENSRNOG00000025584) #10	Os9 (ENSRNOG00000025570) #11	RGD1565117 (ENSRNOG00000033161)	B4galnt1 (ENSRNOG00000004839) #12	Slc26a10 (ENSRNOG00000029465) #14	Arhgef25 (ENSRNOG00000005034) #15	Dtx3 (ENSRNOG00000005129) #16	Pip4k2c (ENSRNOG00000005138) #17	Kif5a (ENSRNOG00000005299) #19	ENSRNOG00000069110 #18	Dctn2 (ENSRNOG00000025481) #20	Mbd6 (ENSRNOG00000006209) #21	Ddit3 (ENSRNOG00000006789) #22	Mars1 (ENSRNOG00000025459) #23	Arhgap9 (ENSRNOG00000006946) #24	Gli1 (ENSRNOG00000025120) #25	Inhbe (ENSRNOG00000007601) #26	Inhbc (ENSRNOG00000007700) #27	R3hdm2 (ENSRNOG00000007801) #30	Stac3 (ENSRNOG00000008050) #31	Ndufa4l2 (ENSRNOG00000031851) #32	Shmt2 (ENSRNOG00000008106) #33	Nxph4 (ENSRNOG00000025059) #34	Lrp1 (ENSRNOG00000025053) #35	Stat6 (ENSRNOG00000025023) #37	Nemp1 (ENSRNOG00000046492)	Nab2 (ENSRNOG00000008415)	Myo1a (ENSRNOG00000004177)
Lesser Egyptian jerboa	MODERN SPECIES	42	Cyp27b1 (ENSJJAG00000016596)	ENSJJAG00000005635 #8	Tspan31 (ENSJJAG00000011792) #9	Marchf9 (ENSJJAG00000000800) #7	Agap2 (ENSJJAG00000012355) #10	Os9 (ENSJJAG00000011446) #11	ENSJJAG00000008739	B4galnt1 (ENSJJAG00000021764) #12	Slc26a10 (ENSJJAG00000000444) #14	Arhgef25 (ENSJJAG00000020641) #15	Dtx3 (ENSJJAG00000015820) #16	ENSJJAG00000016286 #17	Kif5a (ENSJJAG00000018332) #19	Dctn2 (ENSJJAG00000005539) #20	ENSJJAG00000011275 ##21	Ddit3 (ENSJJAG00000011845) #22	Mars1 (ENSJJAG00000018827) #23	ENSJJAG00000010582 #24	Gli1 (ENSJJAG00000005790) #25	Inhbe (ENSJJAG00000005854) #26	Inhbc (ENSJJAG00000024406) #27	R3hdm2 (ENSJJAG00000010001) #30	Stac3 (ENSJJAG00000004686) #31	Ndufa4l2 (ENSJJAG00000022945) #32	Shmt2 (ENSJJAG00000006620) #33	Nxph4 (ENSJJAG00000005486) #34	Lrp1 (ENSJJAG00000024081) #35	Stat6 (ENSJJAG00000024129) #37	Nab2 (ENSJJAG00000016380)	Nemp1 (ENSJJAG00000020038)	Myo1a (ENSJJAG00000012576)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b.i #14	ENSGT01070000253775.a.d.b.j #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b.i #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01090000261933	ENSGT00390000006305.e #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000158208 #7	ENSGT00940000154770.bb #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b.i #14	ENSGT01070000253775.a.d.b.j #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305.e #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Squirrel	MODERN SPECIES	246	ENSSTOG00000001142 #8	TSPAN31 (ENSSTOG00000001138) #9	MARCHF9 (ENSSTOG00000021963) #7	AGAP2 (ENSSTOG00000001113) #10	OS9 (ENSSTOG00000001100) #11	ENSSTOG00000031108	ENSSTOG00000014458	B4GALNT1 (ENSSTOG00000001087) #12	ENSSTOG00000020554 #14	ARHGEF25 (ENSSTOG00000001189) #15	DTX3 (ENSSTOG00000026285) #16	PIP4K2C (ENSSTOG00000001081) #17	KIF5A (ENSSTOG00000001164) #19	DCTN2 (ENSSTOG00000001156) #20	ENSSTOG00000001143 #21	ENSSTOG00000019858 #22	MARS1 (ENSSTOG00000001128) #23	ARHGAP9 (ENSSTOG00000001107) #24	GLI1 (ENSSTOG00000020366) #25	INHBE (ENSSTOG00000025066) #26	INHBC (ENSSTOG00000001097) #27	ENSSTOG00000013424 #30	STAC3 (ENSSTOG00000013409) #31	SHMT2 (ENSSTOG00000013388) #33	NXPH4 (ENSSTOG00000024980) #34	LRP1 (ENSSTOG00000013305) #35	STAT6 (ENSSTOG00000013280) #37	NAB2 (ENSSTOG00000020459)	NEMP1 (ENSSTOG00000012331)	MYO1A (ENSSTOG00000012304)	TAC3 (ENSSTOG00000012292)
Arctic ground squirrel	MODERN SPECIES	197	CYP27B1 (ENSUPAG00010017630)	MARCHF9 (ENSUPAG00010017626) #7	ENSUPAG00010017617 #8	TSPAN31 (ENSUPAG00010017607) #9	AGAP2 (ENSUPAG00010017556) #10	OS9 (ENSUPAG00010017513) #11	B4GALNT1 (ENSUPAG00010017501) #12	ENSUPAG00010017441 #14	ARHGEF25 (ENSUPAG00010017411) #15	DTX3 (ENSUPAG00010017398) #16	PIP4K2C (ENSUPAG00010017376) #17	ENSUPAG00010017369 #18	KIF5A (ENSUPAG00010017316) #19	DCTN2 (ENSUPAG00010017296) #20	MBD6 (ENSUPAG00010017279) #21	ENSUPAG00010017275 #22	MARS1 (ENSUPAG00010017243) #23	GLI1 (ENSUPAG00010017222) #25	ARHGAP9 (ENSUPAG00010017207) #24	INHBE (ENSUPAG00010017202) #26	INHBC (ENSUPAG00010017199) #27	R3HDM2 (ENSUPAG00010016815) #30	STAC3 (ENSUPAG00010016748) #31	SHMT2 (ENSUPAG00010016720) #33	NXPH4 (ENSUPAG00010016712) #34	LRP1 (ENSUPAG00010016565) #35	STAT6 (ENSUPAG00010016543) #37	NAB2 (ENSUPAG00010016528)	NEMP1 (ENSUPAG00010016506)	MYO1A (ENSUPAG00010016464)	TAC3 (ENSUPAG00010016446)
Alpin marmot	MODERN SPECIES	11	CDK4 (ENSMMMG00000010571) #8	TSPAN31 (ENSMMMG00000010594) #9	AGAP2 (ENSMMMG00000010604) #10	OS9 (ENSMMMG00000010642) #11	ENSMMMG00000010692	B4GALNT1 (ENSMMMG00000010698) #12	ENSMMMG00000010726 #14	ARHGEF25 (ENSMMMG00000010788) #15	DTX3 (ENSMMMG00000010875) #16	PIP4K2C (ENSMMMG00000010891) #17	KIF5A (ENSMMMG00000010904) #19	ENSMMMG00000011019 #18	DCTN2 (ENSMMMG00000011027) #20	MBD6 (ENSMMMG00000011054) #21	ENSMMMG00000011091	ENSMMMG00000011094 #22	MARS1 (ENSMMMG00000011099) #23	ARHGAP9 (ENSMMMG00000011136) #24	GLI1 (ENSMMMG00000011156) #25	INHBE (ENSMMMG00000011176) #26	INHBC (ENSMMMG00000011180) #27	R3HDM2 (ENSMMMG00000011206) #30	STAC3 (ENSMMMG00000012741) #31	NDUFA4L2 (ENSMMMG00000012770) #32	ENSMMMG00000012783	SHMT2 (ENSMMMG00000012788) #33	NXPH4 (ENSMMMG00000012812) #34	LRP1 (ENSMMMG00000012817) #35	STAT6 (ENSMMMG00000012942) #37	NAB2 (ENSMMMG00000012959)	NEMP1 (ENSMMMG00000012998)
Marmotini	ANCESTRAL SPECIES	14	ENSGT00390000001588	ENSGT00390000006395	ENSGT00500000045333	ENSGT00940000159084	ENSGT00940000160736	ENSGT00440000039029	ENSGT00390000006205.a	ENSGT00950000183095.a.b.a.b.b	ENSGT00940000159330	ENSGT00390000017627.a	ENSGT00940000160910	ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00390000006305.f #22	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000159934	ENSGT00940000156258	ENSGT01050000245125	ENSGT00390000008808.c	ENSGT00390000006408	ENSGT00950000182886.b.a	ENSGT00950000183114.a.a	ENSGT00940000159274	ENSGT00940000160421	ENSGT00940000158182	ENSGT00940000160921.a	ENSGT00950000182836.a
Marmotini_b	ANCESTRAL SPECIES	17												ENSGT00440000037341.a	ENSGT00940000158843	ENSGT00940000155823.B	ENSGT00500000044929	ENSGT00390000006305.f #22	ENSGT00940000156126	ENSGT00940000153168.B	ENSGT00940000161744	ENSGT00940000159934	ENSGT00940000156258	ENSGT01050000245125	ENSGT00390000008808.c	ENSGT00390000006408	ENSGT00950000182886.b.a	ENSGT00950000183114.a.a	ENSGT00940000159274	ENSGT00940000160421	ENSGT00940000158182	ENSGT00940000160921.a	ENSGT00950000182836.a
Squirrel	MODERN SPECIES	93												FAM98A (ENSSTOG00000010483)	RASGRP3 (ENSSTOG00000010471)	LTBP1 (ENSSTOG00000011543)	TTC27 (ENSSTOG00000027305)	ENSSTOG00000031910 #22	BIRC6 (ENSSTOG00000028422)	YIPF4 (ENSSTOG00000012128)	NLRC4 (ENSSTOG00000026976)	SLC30A6 (ENSSTOG00000002286)	SPAST (ENSSTOG00000019363)	DPY30 (ENSSTOG00000013372)	MEMO1 (ENSSTOG00000002828)	SRD5A2 (ENSSTOG00000028843)	XDH (ENSSTOG00000012152)	EHD3 (ENSSTOG00000028279)	CAPN14 (ENSSTOG00000021907)	GALNT14 (ENSSTOG00000012135)	CAPN13 (ENSSTOG00000011438)	LCLAT1 (ENSSTOG00000004703)	LBH (ENSSTOG00000032299)
Arctic ground squirrel	MODERN SPECIES													FAM98A (ENSUPAG00010000002)	RASGRP3 (ENSUPAG00010000003)	LTBP1 (ENSUPAG00010000004)	TTC27 (ENSUPAG00010000115)	ENSUPAG00010000225 #22	BIRC6 (ENSUPAG00010000246)	YIPF4 (ENSUPAG00010001510)	NLRC4 (ENSUPAG00010001525)	SLC30A6 (ENSUPAG00010001566)	ENSUPAG00010001616	SPAST (ENSUPAG00010001625)	ENSUPAG00010001748	ENSUPAG00010001753	MEMO1 (ENSUPAG00010001812)	SRD5A2 (ENSUPAG00010001940)	XDH (ENSUPAG00010001959)	EHD3 (ENSUPAG00010001987)	GALNT14 (ENSUPAG00010001997)	ENSUPAG00010002033	CAPN13 (ENSUPAG00010002040)
Alpin marmot	MODERN SPECIES	6	NDUFAF7 (ENSMMMG00000017232)	CEBPZ (ENSMMMG00000017245)	CEBPZOS (ENSMMMG00000017252)	SULT6B1 (ENSMMMG00000017259)	EIF2AK2 (ENSMMMG00000017268)	GPATCH11 (ENSMMMG00000017576)	HEATR5B (ENSMMMG00000017586)	STRN (ENSMMMG00000017653)	VIT (ENSMMMG00000018350)	FEZ2 (ENSMMMG00000018399)	CRIM1 (ENSMMMG00000018434)	FAM98A (ENSMMMG00000018506)	RASGRP3 (ENSMMMG00000018522)	LTBP1 (ENSMMMG00000018556)	TTC27 (ENSMMMG00000018618)	ENSMMMG00000018644 #22	BIRC6 (ENSMMMG00000018677)	YIPF4 (ENSMMMG00000018753)	NLRC4 (ENSMMMG00000018816)	SLC30A6 (ENSMMMG00000018819)	SPAST (ENSMMMG00000018838)	ENSMMMG00000018887	MEMO1 (ENSMMMG00000018930)	SRD5A2 (ENSMMMG00000018968)	XDH (ENSMMMG00000018970)	EHD3 (ENSMMMG00000018998)	GALNT14 (ENSMMMG00000019041)	ENSMMMG00000019074	LCLAT1 (ENSMMMG00000019092)	ENSMMMG00000019108	LBH (ENSMMMG00000019111)
Eurasian red squirrel	MODERN SPECIES	14	CYP27B1 (ENSSVLG00005016149)	MARCHF9 (ENSSVLG00005016118) #7	CDK4 (ENSSVLG00005015967) #8	TSPAN31 (ENSSVLG00005015825) #9	AGAP2 (ENSSVLG00005015393) #10	OS9 (ENSSVLG00005015079) #11	B4GALNT1 (ENSSVLG00005014897) #12	ENSSVLG00005014760 #14	ENSSVLG00005014611 #14	ARHGEF25 (ENSSVLG00005014310) #15	DTX3 (ENSSVLG00005014198) #16	PIP4K2C (ENSSVLG00005014089) #17	KIF5A (ENSSVLG00005013715) #19	DCTN2 (ENSSVLG00005013297) #20	MBD6 (ENSSVLG00005013192) #21	DDIT3 (ENSSVLG00005013130) #22	MARS1 (ENSSVLG00005012921) #23	ARHGAP9 (ENSSVLG00005011907) #24	GLI1 (ENSSVLG00005011547) #25	INHBE (ENSSVLG00005011485) #26	INHBC (ENSSVLG00005011429) #27	R3HDM2 (ENSSVLG00005011028) #30	STAC3 (ENSSVLG00005010688) #31	NDUFA4L2 (ENSSVLG00005010637) #32	SHMT2 (ENSSVLG00005010562) #33	NXPH4 (ENSSVLG00005010530) #34	LRP1 (ENSSVLG00005009995) #35	STAT6 (ENSSVLG00005009880) #37	NAB2 (ENSSVLG00005009807)	NEMP1 (ENSSVLG00005009668)	MYO1A (ENSSVLG00005009487)
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Long-tailed chinchilla	MODERN SPECIES	165	METTL1 (ENSCLAG00000014968)	CYP27B1 (ENSCLAG00000013845)	TSPAN31 (ENSCLAG00000013511) #9	CDK4 (ENSCLAG00000012995) #8	MARCHF9 (ENSCLAG00000012609) #7	AGAP2 (ENSCLAG00000009332) #10	OS9 (ENSCLAG00000010151) #11	B4GALNT1 (ENSCLAG00000009160) #12	ENSCLAG00000011703 #14	ARHGEF25 (ENSCLAG00000010120) #15	DTX3 (ENSCLAG00000008560) #16	PIP4K2C (ENSCLAG00000012549) #17	KIF5A (ENSCLAG00000011917) #19	DCTN2 (ENSCLAG00000010761) #20	MBD6 (ENSCLAG00000010083) #21	DDIT3 (ENSCLAG00000009376) #22	MARS1 (ENSCLAG00000012164) #23	ARHGAP9 (ENSCLAG00000015213) #24	GLI1 (ENSCLAG00000010833) #25	INHBE (ENSCLAG00000013199) #26	INHBC (ENSCLAG00000015051) #27	R3HDM2 (ENSCLAG00000011997) #30	STAC3 (ENSCLAG00000017371) #31	NDUFA4L2 (ENSCLAG00000017351) #32	SHMT2 (ENSCLAG00000014378) #33	NXPH4 (ENSCLAG00000016280) #34	LRP1 (ENSCLAG00000011741) #35	STAT6 (ENSCLAG00000011587) #37	NAB2 (ENSCLAG00000009310)	NEMP1 (ENSCLAG00000011169)	MYO1A (ENSCLAG00000009254)
Degu	MODERN SPECIES	327	CYP27B1 (ENSODEG00000001745)	MARCHF9 (ENSODEG00000001713) #7	ENSODEG00000001702 #8	TSPAN31 (ENSODEG00000001691) #9	AGAP2 (ENSODEG00000001675) #10	OS9 (ENSODEG00000001586) #11	B4GALNT1 (ENSODEG00000002156) #12	ENSODEG00000002108 #14	ARHGEF25 (ENSODEG00000002032) #15	DTX3 (ENSODEG00000001975) #16	PIP4K2C (ENSODEG00000001958) #17	KIF5A (ENSODEG00000001884) #19	DCTN2 (ENSODEG00000001844) #20	ENSODEG00000001830 #21	ENSODEG00000001814 #21	DDIT3 (ENSODEG00000001801) #22	MARS1 (ENSODEG00000001752) #23	ARHGAP9 (ENSODEG00000001619) #24	GLI1 (ENSODEG00000001558) #25	INHBE (ENSODEG00000001543) #26	INHBC (ENSODEG00000001532) #27	ENSODEG00000001520 #30	ENSODEG00000001512	ENSODEG00000001494 #30	ENSODEG00000001478	STAC3 (ENSODEG00000001424) #31	NDUFA4L2 (ENSODEG00000002560) #32	ENSODEG00000002538 #33	NXPH4 (ENSODEG00000002515) #34	LRP1 (ENSODEG00000002173) #35	STAT6 (ENSODEG00000001929) #37
Guinea pig	MODERN SPECIES	9	EEF1AKMT3 (ENSCPOG00000011497)	METTL1 (ENSCPOG00000000066)	CYP27B1 (ENSCPOG00000019603)	MARCHF9 (ENSCPOG00000002671) #7	CDK4 (ENSCPOG00000033131) #8	TSPAN31 (ENSCPOG00000011494) #9	AGAP2 (ENSCPOG00000022267) #10	OS9 (ENSCPOG00000002667) #11	B4GALNT1 (ENSCPOG00000003202) #12	ENSCPOG00000033620 #14	ARHGEF25 (ENSCPOG00000020097) #15	PIP4K2C (ENSCPOG00000022071) #17	KIF5A (ENSCPOG00000012882) #19	DCTN2 (ENSCPOG00000012879) #20	MBD6 (ENSCPOG00000012873) #21	DDIT3 (ENSCPOG00000012871) #22	MARS1 (ENSCPOG00000012866) #23	ARHGAP9 (ENSCPOG00000014343) #24	GLI1 (ENSCPOG00000005414) #25	INHBE (ENSCPOG00000031115) #26	INHBC (ENSCPOG00000033593) #27	R3HDM2 (ENSCPOG00000009217) #30	STAC3 (ENSCPOG00000006200) #31	NDUFA4L2 (ENSCPOG00000035802) #32	SHMT2 (ENSCPOG00000012840) #33	LRP1 (ENSCPOG00000031730) #35	STAT6 (ENSCPOG00000012941) #37	NAB2 (ENSCPOG00000012940)	NEMP1 (ENSCPOG00000034078)	MYO1A (ENSCPOG00000012927)	TAC3 (ENSCPOG00000012924)
Naked mole-rat female	MODERN SPECIES	26	CBLN1 (ENSHGLG00000039996)	ENSHGLG00000008302	ZNF423 (ENSHGLG00000007674)	ENSHGLG00000021434	CNEP1R1 (ENSHGLG00000046645)	HEATR3 (ENSHGLG00000004488)	TENT4B (ENSHGLG00000004206)	ADCY7 (ENSHGLG00000006152)	BRD7 (ENSHGLG00000005800)	NKD1 (ENSHGLG00000041852)	SNX20 (ENSHGLG00000004254)	NOD2 (ENSHGLG00000003967)	ENSHGLG00000005762	ENSHGLG00000004288	ENSHGLG00000046400	ENSHGLG00000003699 #22	ENSHGLG00000003522	ENSHGLG00000003452	ENSHGLG00000014938	RBL2 (ENSHGLG00000012893)	AKTIP (ENSHGLG00000008426)	RPGRIP1L (ENSHGLG00000008154)	ENSHGLG00000050695	FTO (ENSHGLG00000005386)	IRX3 (ENSHGLG00000004630)	IRX5 (ENSHGLG00000004006)	IRX6 (ENSHGLG00000003805)	MMP2 (ENSHGLG00000003708)	LPCAT2 (ENSHGLG00000006950)	SLC6A2 (ENSHGLG00000006203)	ENSHGLG00000005501
Lagomorpha	ANCESTRAL SPECIES	87	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Rabbit	MODERN SPECIES	447	TSFM (ENSOCUG00000012512)	METTL1 (ENSOCUG00000012498)	CYP27B1 (ENSOCUG00000012486)	CDK4 (ENSOCUG00000012474) #8	TSPAN31 (ENSOCUG00000012465) #9	AGAP2 (ENSOCUG00000001304) #10	OS9 (ENSOCUG00000024515) #11	B4GALNT1 (ENSOCUG00000014121) #12	ENSOCUG00000014113 #14	DTX3 (ENSOCUG00000000915) #16	PIP4K2C (ENSOCUG00000000916) #17	ENSOCUG00000031292	KIF5A (ENSOCUG00000011273) #19	DCTN2 (ENSOCUG00000011262) #20	MBD6 (ENSOCUG00000011255) #21	DDIT3 (ENSOCUG00000023877) #22	MARS1 (ENSOCUG00000007373) #23	ARHGAP9 (ENSOCUG00000022807) #24	GLI1 (ENSOCUG00000011128) #25	INHBE (ENSOCUG00000007382) #26	INHBC (ENSOCUG00000007380) #27	R3HDM2 (ENSOCUG00000013258) #30	STAC3 (ENSOCUG00000013251) #31	NDUFA4L2 (ENSOCUG00000023263) #32	SHMT2 (ENSOCUG00000013242) #33	ENSOCUG00000037050	STAT6 (ENSOCUG00000007929) #37	NAB2 (ENSOCUG00000024399)	NEMP1 (ENSOCUG00000013180)	MYO1A (ENSOCUG00000001335)	ENSOCUG00000032767
Pika	MODERN SPECIES	3584	TSFM (ENSOPRG00000006670)	EEF1AKMT3 (ENSOPRG00000006664)	METTL1 (ENSOPRG00000006660)	CYP27B1 (ENSOPRG00000006649)	MARCHF9 (ENSOPRG00000006640) #7	CDK4 (ENSOPRG00000006631) #8	TSPAN31 (ENSOPRG00000006622) #9	OS9 (ENSOPRG00000006604) #11	B4GALNT1 (ENSOPRG00000006593) #12	ARHGEF25 (ENSOPRG00000006581) #15	DTX3 (ENSOPRG00000006576) #16	PIP4K2C (ENSOPRG00000006570) #17	KIF5A (ENSOPRG00000006555) #19	DCTN2 (ENSOPRG00000006544) #20	MBD6 (ENSOPRG00000006533) #21	DDIT3 (ENSOPRG00000006529) #22	MARS1 (ENSOPRG00000006518) #23	ARHGAP9 (ENSOPRG00000006501) #24	GLI1 (ENSOPRG00000006483) #25	INHBE (ENSOPRG00000006480) #26	INHBC (ENSOPRG00000006476) #27
Tree shrew	MODERN SPECIES	1913														DCTN2 (ENSTBEG00000000677) #20	MBD6 (ENSTBEG00000000543) #21	DDIT3 (ENSTBEG00000000521) #22	MARS1 (ENSTBEG00000000303) #23	ARHGAP9 (ENSTBEG00000007993) #24	INHBE (ENSTBEG00000007851) #26
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Suina	ANCESTRAL SPECIES	4	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Pig	MODERN SPECIES	13	METTL1 (ENSSSCG00000061324)	CYP27B1 (ENSSSCG00000028637)	MARCHF9 (ENSSSCG00000033013) #7	CDK4 (ENSSSCG00000025092) #8	TSPAN31 (ENSSSCG00000036731) #9	AGAP2 (ENSSSCG00000038732) #10	OS9 (ENSSSCG00000035875) #11	B4GALNT1 (ENSSSCG00000000433) #12	ENSSSCG00000036029 #14	ARHGEF25 (ENSSSCG00000000435) #15	DTX3 (ENSSSCG00000000449) #16	PIP4K2C (ENSSSCG00000000436) #17	KIF5A (ENSSSCG00000000439) #19	DCTN2 (ENSSSCG00000000444) #20	MBD6 (ENSSSCG00000000431) #21	DDIT3 (ENSSSCG00000050998) #22	MARS1 (ENSSSCG00000023318) #23	ARHGAP9 (ENSSSCG00000000437) #24	GLI1 (ENSSSCG00000000443) #25	INHBE (ENSSSCG00000000442) #26	INHBC (ENSSSCG00000037446) #27	ENSSSCG00000051626	R3HDM2 (ENSSSCG00000026498) #30	NDUFA4L2 (ENSSSCG00000027621) #32	SHMT2 (ENSSSCG00000037077) #33	NXPH4 (ENSSSCG00000039966) #34	ENSSSCG00000050398 #35	STAT6 (ENSSSCG00000040435) #37	NAB2 (ENSSSCG00000000411)	NEMP1 (ENSSSCG00000025542)	MYO1A (ENSSSCG00000000413)
Chacoan peccary	MODERN SPECIES	901	CYP27B1 (ENSCWAG00000006368)	MARCHF9 (ENSCWAG00000006418) #7	CDK4 (ENSCWAG00000006445) #8	TSPAN31 (ENSCWAG00000006495) #9	AGAP2 (ENSCWAG00000006597) #10	OS9 (ENSCWAG00000006797) #11	B4GALNT1 (ENSCWAG00000007129) #12	ENSCWAG00000007347 #14	ARHGEF25 (ENSCWAG00000007404) #15	DTX3 (ENSCWAG00000007547) #16	PIP4K2C (ENSCWAG00000007595) #17	ENSCWAG00000007631 #17	KIF5A (ENSCWAG00000007667) #19	DCTN2 (ENSCWAG00000007899) #20	MBD6 (ENSCWAG00000008082) #21	DDIT3 (ENSCWAG00000008129) #22	MARS1 (ENSCWAG00000008181) #23	ARHGAP9 (ENSCWAG00000008331) #24	GLI1 (ENSCWAG00000008584) #25	INHBE (ENSCWAG00000008764) #26	INHBC (ENSCWAG00000008795) #27	R3HDM2 (ENSCWAG00000008845) #30	STAC3 (ENSCWAG00000009342) #31	NDUFA4L2 (ENSCWAG00000009521) #32	SHMT2 (ENSCWAG00000009567) #33	NXPH4 (ENSCWAG00000009666) #34	LRP1 (ENSCWAG00000009726) #35	STAT6 (ENSCWAG00000010281) #37	NAB2 (ENSCWAG00000010548)	NEMP1 (ENSCWAG00000010689)	MYO1A (ENSCWAG00000010840)
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Camelidae	ANCESTRAL SPECIES	76	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Arabian camel	MODERN SPECIES	3	CYP27B1 (ENSCDRG00005019909)	MARCHF9 (ENSCDRG00005019897) #7	CDK4 (ENSCDRG00005019885) #8	ENSCDRG00005019838 #9	AGAP2 (ENSCDRG00005019817) #10	OS9 (ENSCDRG00005019665) #11	B4GALNT1 (ENSCDRG00005019607) #12	ENSCDRG00005019581 #14	ENSCDRG00005019572 #14	ARHGEF25 (ENSCDRG00005019460) #15	DTX3 (ENSCDRG00005019411) #16	PIP4K2C (ENSCDRG00005019272) #17	KIF5A (ENSCDRG00005019073) #19	DCTN2 (ENSCDRG00005019001) #20	MBD6 (ENSCDRG00005018960) #21	DDIT3 (ENSCDRG00005018924) #22	MARS1 (ENSCDRG00005018613) #23	ARHGAP9 (ENSCDRG00005018474) #24	GLI1 (ENSCDRG00005018398) #25	INHBE (ENSCDRG00005018362) #26	INHBC (ENSCDRG00005018347) #27	R3HDM2 (ENSCDRG00005018054) #30	STAC3 (ENSCDRG00005017976) #31	NDUFA4L2 (ENSCDRG00005017931) #32	SHMT2 (ENSCDRG00005017890) #33	LRP1 (ENSCDRG00005017186) #35	STAT6 (ENSCDRG00005017051) #37	NAB2 (ENSCDRG00005016972)	NEMP1 (ENSCDRG00005016884)	MYO1A (ENSCDRG00005016667)	TAC3 (ENSCDRG00005016611)
Alpaca	MODERN SPECIES	2269												ENSVPAG00000008689 #15	KIF5A (ENSVPAG00000008682) #19	DCTN2 (ENSVPAG00000008680) #20	ENSVPAG00000008676 #21	DDIT3 (ENSVPAG00000008674) #22	MARS1 (ENSVPAG00000008665) #23	ENSVPAG00000008664 #24	ENSVPAG00000008663 #25	INHBC (ENSVPAG00000008661) #27	R3HDM2 (ENSVPAG00000008656) #30
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Cetacea	ANCESTRAL SPECIES	8	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00980000198488.m.b.b.b.r	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00980000198488.m.b.b.b.r	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	1133														DCTN2 (ENSPCTG00005022028) #20	MBD6 (ENSPCTG00005022046) #21	DDIT3 (ENSPCTG00005022059) #22	MARS (ENSPCTG00005022075) #23	ARHGAP9 (ENSPCTG00005022103) #24	GLI1 (ENSPCTG00005022144) #25	INHBE (ENSPCTG00005022159) #26
Sperm whale	MODERN SPECIES	20	SEMA4D (ENSPCTG00005010286)	ENSPCTG00005010223	SECISBP2 (ENSPCTG00005010120)	CKS2 (ENSPCTG00005010079)	SHC3 (ENSPCTG00005009913)	S1PR3 (ENSPCTG00005009896)	NXNL2 (ENSPCTG00005009860)	SPIN1 (ENSPCTG00005009796)	ENSPCTG00005009720	CDK20 (ENSPCTG00005009562)	ENSPCTG00005009509	ENSPCTG00005009459	ZNF169 (ENSPCTG00005009394)	PTPDC1 (ENSPCTG00005009259)	BARX1 (ENSPCTG00005009148)	ENSPCTG00005009129 #22	PHF2 (ENSPCTG00005008980)	FAM120A (ENSPCTG00005008753)	ENSPCTG00005006732	ENSPCTG00005006501	ENSPCTG00005006487	NINJ1 (ENSPCTG00005006464)	CARD19 (ENSPCTG00005006437)	SUSD3 (ENSPCTG00005006380)	FGD3 (ENSPCTG00005006265)	ENSPCTG00005006231	BICD2 (ENSPCTG00005006206)	IPPK (ENSPCTG00005006119)	ECM2 (ENSPCTG00005006088)	ASPN (ENSPCTG00005006019)	OMD (ENSPCTG00005005968)
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770.nb #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00980000198488.m.b.b.b.r	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a.e #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770.nb #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00980000198488.m.b.b.b.r.a.a	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a.e #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770.nb #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00980000198488.m.b.b.b.r.a.a	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a.e #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a
Narwhal	MODERN SPECIES	313	METTL1 (ENSMMNG00015018009)	CYP27B1 (ENSMMNG00015017884)	MARCHF9 (ENSMMNG00015017858) #7	ENSMMNG00015017824 #8	TSPAN31 (ENSMMNG00015017754) #9	AGAP2 (ENSMMNG00015017635) #10	OS9 (ENSMMNG00015017419) #11	B4GALNT1 (ENSMMNG00015017261) #12	ENSMMNG00015017200 #14	ARHGEF25 (ENSMMNG00015017116) #15	DTX3 (ENSMMNG00015017050) #16	PIP4K2C (ENSMMNG00015017000) #17	KIF5A (ENSMMNG00015016853) #19	DCTN2 (ENSMMNG00015016787) #20	MBD6 (ENSMMNG00015016740) #21	DDIT3 (ENSMMNG00015016690) #22	MARS1 (ENSMMNG00015016613) #23	ARHGAP9 (ENSMMNG00015016045) #24	GLI1 (ENSMMNG00015015844) #25	INHBE (ENSMMNG00015015773) #26	INHBC (ENSMMNG00015021411) #27	ENSMMNG00015021405	R3HDM2 (ENSMMNG00015021270) #30	STAC3 (ENSMMNG00015021084) #31	NDUFA4L2 (ENSMMNG00015021056) #32	ENSMMNG00015021030 #33	NXPH4 (ENSMMNG00015021013) #34	LRP1 (ENSMMNG00015020900) #35	STAT6 (ENSMMNG00015020805) #37	NAB2 (ENSMMNG00015020767)	NEMP1 (ENSMMNG00015020716)
Beluga whale	MODERN SPECIES	39	METTL1 (ENSDLEG00000004520)	CYP27B1 (ENSDLEG00000004538)	MARCH9 (ENSDLEG00000004564) #7	CDK4 (ENSDLEG00000004574) #8	TSPAN31 (ENSDLEG00000004620) #9	AGAP2 (ENSDLEG00000004638) #10	OS9 (ENSDLEG00000004648) #11	B4GALNT1 (ENSDLEG00000004661) #12	ENSDLEG00000004698 #14	ARHGEF25 (ENSDLEG00000004833) #15	DTX3 (ENSDLEG00000005206) #16	PIP4K2C (ENSDLEG00000005214) #17	KIF5A (ENSDLEG00000000912) #19	DCTN2 (ENSDLEG00000002739) #20	MBD6 (ENSDLEG00000002751) #21	DDIT3 (ENSDLEG00000002758) #22	MARS (ENSDLEG00000002765) #23	ARHGAP9 (ENSDLEG00000002814) #24	GLI1 (ENSDLEG00000003010) #25	INHBE (ENSDLEG00000003021) #26	INHBC (ENSDLEG00000003026) #27	R3HDM2 (ENSDLEG00000003148) #30	ENSDLEG00000003493	STAC3 (ENSDLEG00000003503) #31	NDUFA4L2 (ENSDLEG00000003536) #32	SHMT2 (ENSDLEG00000003549) #33	NXPH4 (ENSDLEG00000003607) #34	LRP1 (ENSDLEG00000003892) #35	STAT6 (ENSDLEG00000005231) #37	NAB2 (ENSDLEG00000005321)	NEMP1 (ENSDLEG00000005331)
Vaquita	MODERN SPECIES	1	CYP27B1 (ENSPSNG00000007710)	MARCHF9 (ENSPSNG00000007774) #7	CDK4 (ENSPSNG00000007800) #8	TSPAN31 (ENSPSNG00000007870) #9	AGAP2 (ENSPSNG00000007974) #10	ENSPSNG00000008201	OS9 (ENSPSNG00000008262) #11	B4GALNT1 (ENSPSNG00000008510) #12	ENSPSNG00000008644 #14	ARHGEF25 (ENSPSNG00000008788) #15	DTX3 (ENSPSNG00000008935) #16	PIP4K2C (ENSPSNG00000009182) #17	KIF5A (ENSPSNG00000009018) #19	DCTN2 (ENSPSNG00000009415) #20	MBD6 (ENSPSNG00000009553) #21	DDIT3 (ENSPSNG00000009627) #22	MARS1 (ENSPSNG00000009735) #23	ARHGAP9 (ENSPSNG00000010031) #24	GLI1 (ENSPSNG00000011248) #25	INHBE (ENSPSNG00000011557) #26	INHBC (ENSPSNG00000011598) #27	R3HDM2 (ENSPSNG00000011734) #30	ENSPSNG00000006066	STAC3 (ENSPSNG00000006089) #31	NDUFA4L2 (ENSPSNG00000006121) #32	SHMT2 (ENSPSNG00000006153) #33	NXPH4 (ENSPSNG00000006288) #34	LRP1 (ENSPSNG00000006383) #35	STAT6 (ENSPSNG00000006492) #37	NAB2 (ENSPSNG00000006572)	NEMP1 (ENSPSNG00000006630)
Dolphin	MODERN SPECIES	1662													KIF5A (ENSTTRG00000013092) #19	DCTN2 (ENSTTRG00000013091) #20	MBD6 (ENSTTRG00000013090) #21	DDIT3 (ENSTTRG00000013089) #22	MARS1 (ENSTTRG00000013088) #23	ARHGAP9 (ENSTTRG00000013087) #24	GLI1 (ENSTTRG00000013086) #25	INHBE (ENSTTRG00000013085) #26	INHBC (ENSTTRG00000013083) #27	R3HDM2 (ENSTTRG00000013082) #30	STAC3 (ENSTTRG00000013081) #31	NDUFA4L2 (ENSTTRG00000013080) #32	SHMT2 (ENSTTRG00000013079) #33	NXPH4 (ENSTTRG00000013078) #34	LRP1 (ENSTTRG00000013071) #35	STAT6 (ENSTTRG00000013064) #37	NAB2 (ENSTTRG00000013063)	NEMP1 (ENSTTRG00000013060)	MYO1A (ENSTTRG00000013052)
Blue whale	MODERN SPECIES	1	CYP27B1 (ENSBMSG00010010958)	MARCHF9 (ENSBMSG00010010932) #7	CDK4 (ENSBMSG00010010900) #8	TSPAN31 (ENSBMSG00010010871) #9	AGAP2 (ENSBMSG00010010788) #10	OS9 (ENSBMSG00010010645) #11	B4GALNT1 (ENSBMSG00010010535) #12	ENSBMSG00010010490 #14	ENSBMSG00010010469 #14	ARHGEF25 (ENSBMSG00010010385) #15	DTX3 (ENSBMSG00010010278) #16	ENSBMSG00010010249 #17	KIF5A (ENSBMSG00010010111) #19	DCTN2 (ENSBMSG00010010016) #20	MBD6 (ENSBMSG00010009962) #21	DDIT3 (ENSBMSG00010009923) #22	MARS1 (ENSBMSG00010009884) #23	ARHGAP9 (ENSBMSG00010009452) #24	GLI1 (ENSBMSG00010009355) #25	INHBE (ENSBMSG00010009322) #26	INHBC (ENSBMSG00010009316) #27	ENSBMSG00010009311	R3HDM2 (ENSBMSG00010009100) #30	STAC3 (ENSBMSG00010008980) #31	NDUFA4L2 (ENSBMSG00010008952) #32	SHMT2 (ENSBMSG00010008931) #33	NXPH4 (ENSBMSG00010008903) #34	LRP1 (ENSBMSG00010008798) #35	STAT6 (ENSBMSG00010008695) #37	NAB2 (ENSBMSG00010008669)	NEMP1 (ENSBMSG00010008654)
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Yarkand deer	MODERN SPECIES	22	ENSCHYG00000000187 #9	AGAP2 (ENSCHYG00000000224) #10	OS9 (ENSCHYG00000000343) #11	ENSCHYG00000000421	ENSCHYG00000000426	B4GALNT1 (ENSCHYG00000000467) #12	ENSCHYG00000000535 #14	ARHGEF25 (ENSCHYG00000000587) #15	DTX3 (ENSCHYG00000000767) #16	PIP4K2C (ENSCHYG00000000784) #17	KIF5A (ENSCHYG00000000851) #19	ENSCHYG00000001025 #18	DCTN2 (ENSCHYG00000001061) #20	MBD6 (ENSCHYG00000001139) #21	ENSCHYG00000001171	DDIT3 (ENSCHYG00000001190) #22	MARS1 (ENSCHYG00000001236) #23	ARHGAP9 (ENSCHYG00000001344) #24	GLI1 (ENSCHYG00000001394) #25	INHBE (ENSCHYG00000001462) #26	INHBC (ENSCHYG00000001473) #27	R3HDM2 (ENSCHYG00000001549) #30	STAC3 (ENSCHYG00000001908) #31	NDUFA4L2 (ENSCHYG00000001961) #32	SHMT2 (ENSCHYG00000001992) #33	NXPH4 (ENSCHYG00000002015) #34	LRP1 (ENSCHYG00000002067) #35	STAT6 (ENSCHYG00000002302) #37	NAB2 (ENSCHYG00000002341)	NEMP1 (ENSCHYG00000002376)	MYO1A (ENSCHYG00000002446)
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000158208 #7	ENSGT00940000154770.pb.a #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Caprinae	ANCESTRAL SPECIES		ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770.pb.a #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Goat	MODERN SPECIES	24	MARCHF9 (ENSCHIG00000026496) #7	CDK4 (ENSCHIG00000020575) #8	TSPAN31 (ENSCHIG00000014754) #9	AGAP2 (ENSCHIG00000000522) #10	OS9 (ENSCHIG00000024824) #11	ENSCHIG00000011902	B4GALNT1 (ENSCHIG00000026781) #12	ENSCHIG00000012447 #14	ARHGEF25 (ENSCHIG00000001591) #15	DTX3 (ENSCHIG00000017813) #16	PIP4K2C (ENSCHIG00000010259) #17	KIF5A (ENSCHIG00000015115) #19	ENSCHIG00000023881 #18	DCTN2 (ENSCHIG00000021509) #20	MBD6 (ENSCHIG00000017594) #21	DDIT3 (ENSCHIG00000011897) #22	MARS1 (ENSCHIG00000027023) #23	ARHGAP9 (ENSCHIG00000013388) #24	GLI1 (ENSCHIG00000007287) #25	INHBE (ENSCHIG00000022416) #26	INHBC (ENSCHIG00000017660) #27	ENSCHIG00000007552	R3HDM2 (ENSCHIG00000014022) #30	STAC3 (ENSCHIG00000000887) #31	SHMT2 (ENSCHIG00000003271) #33	NXPH4 (ENSCHIG00000003451) #34	LRP1 (ENSCHIG00000024408) #35	STAT6 (ENSCHIG00000025666) #37	NAB2 (ENSCHIG00000019285)	NEMP1 (ENSCHIG00000015757)	MYO1A (ENSCHIG00000011774)
Rambouillet Sheep	MODERN SPECIES	19	MARCHF9 (ENSOARG00020000135) #7	CDK4 (ENSOARG00020000149) #8	TSPAN31 (ENSOARG00020000196) #9	AGAP2 (ENSOARG00020000269) #10	OS9 (ENSOARG00020000439) #11	ENSOARG00020000589	B4GALNT1 (ENSOARG00020000620) #12	ENSOARG00020000696 #14	ARHGEF25 (ENSOARG00020000777) #15	DTX3 (ENSOARG00020000880) #16	PIP4K2C (ENSOARG00020000907) #17	KIF5A (ENSOARG00020001004) #19	ENSOARG00020001125 #18	DCTN2 (ENSOARG00020001160) #20	MBD6 (ENSOARG00020001220) #21	DDIT3 (ENSOARG00020001256) #22	MARS1 (ENSOARG00020001285) #23	ARHGAP9 (ENSOARG00020001310) #24	GLI1 (ENSOARG00020001339) #25	INHBE (ENSOARG00020001392) #26	INHBC (ENSOARG00020001401) #27	R3HDM2 (ENSOARG00020001425) #30	STAC3 (ENSOARG00020001529) #31	NDUFA4L2 (ENSOARG00020001582) #32	SHMT2 (ENSOARG00020001596) #33	NXPH4 (ENSOARG00020001623) #34	LRP1 (ENSOARG00020001685) #35	STAT6 (ENSOARG00020001933) #37	NAB2 (ENSOARG00020002028)	NEMP1 (ENSOARG00020002060)	MYO1A (ENSOARG00020002126)
Bovinae	ANCESTRAL SPECIES	17	ENSGT00940000154770.pb.a #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000007067.d	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a
Bos	ANCESTRAL SPECIES	2	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000007067.d	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000247135	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000007067.d	ENSGT00390000018829.g.b.f	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000247135	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609.i #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a
Hybrid Bos Indicus	MODERN SPECIES	24	ENSBIXG00005011149 #8	TSPAN31 (ENSBIXG00005011215) #9	AGAP2 (ENSBIXG00005011340) #10	OS9 (ENSBIXG00005000446) #11	ENSBIXG00005011555	ENSBIXG00005011576	B4GALNT1 (ENSBIXG00005011641) #12	ENSBIXG00005011668 #14	ARHGEF25 (ENSBIXG00005011722) #15	DTX3 (ENSBIXG00005011818) #16	PIP4K2C (ENSBIXG00005007525) #17	ENSBIXG00005011895	KIF5A (ENSBIXG00005011992) #19	DCTN2 (ENSBIXG00005012044) #20	MBD6 (ENSBIXG00005012082) #21	DDIT3 (ENSBIXG00005012115) #22	MARS1 (ENSBIXG00005012184) #23	ARHGAP9 (ENSBIXG00005012333) #24	GLI1 (ENSBIXG00005001319) #25	INHBE (ENSBIXG00005012383) #26	INHBC (ENSBIXG00005012395) #27	ENSBIXG00005001373 #30	STAC3 (ENSBIXG00005012603) #31	NDUFA4L2 (ENSBIXG00005012626) #32	SHMT2 (ENSBIXG00005012660) #33	NXPH4 (ENSBIXG00005012677) #34	LRP1 (ENSBIXG00005012721) #35	STAT6 (ENSBIXG00005001415) #37	NAB2 (ENSBIXG00005007004)	NEMP1 (ENSBIXG00005012888)	MYO1A (ENSBIXG00005013026)
Cow	MODERN SPECIES	24	TSPAN31 (ENSBTAG00000007158) #9	AGAP2 (ENSBTAG00000007156) #10	OS9 (ENSBTAG00000007152) #11	ENSBTAG00000050652	ENSBTAG00000049386	B4GALNT1 (ENSBTAG00000004494) #12	SLC26A10 (ENSBTAG00000023289) #14	ARHGEF25 (ENSBTAG00000018003) #15	DTX3 (ENSBTAG00000018002) #16	PIP4K2C (ENSBTAG00000003942) #17	ENSBTAG00000051574	KIF5A (ENSBTAG00000021336) #19	ENSBTAG00000051593 #18	DCTN2 (ENSBTAG00000010624) #20	MBD6 (ENSBTAG00000010616) #21	DDIT3 (ENSBTAG00000031544) #22	MARS1 (ENSBTAG00000018405) #23	ARHGAP9 (ENSBTAG00000018403) #24	GLI1 (ENSBTAG00000006631) #25	INHBE (ENSBTAG00000006599) #26	INHBC (ENSBTAG00000019084) #27	R3HDM2 (ENSBTAG00000018361) #30	STAC3 (ENSBTAG00000018358) #31	NDUFA4L2 (ENSBTAG00000031503) #32	SHMT2 (ENSBTAG00000031500) #33	NXPH4 (ENSBTAG00000047650) #34	LRP1 (ENSBTAG00000010830) #35	STAT6 (ENSBTAG00000006335) #37	NAB2 (ENSBTAG00000006324)	ENSBTAG00000031076	NEMP1 (ENSBTAG00000014659)
Bos_a	ANCESTRAL SPECIES	3	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000007067.d	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT01050000247135	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a
Wild yak	MODERN SPECIES	1313	ENSBMUG00000025436 #8	TSPAN31 (ENSBMUG00000025443) #9	AGAP2 (ENSBMUG00000025447) #10	OS9 (ENSBMUG00000025480) #11	ENSBMUG00000025488	B4GALNT1 (ENSBMUG00000025492) #12	ENSBMUG00000025498 #14	ARHGEF25 (ENSBMUG00000025517) #15	DTX3 (ENSBMUG00000025531) #16	PIP4K2C (ENSBMUG00000025536) #17	ENSBMUG00000025540	KIF5A (ENSBMUG00000025562) #19	ENSBMUG00000025571 #18	DCTN2 (ENSBMUG00000025591) #20	MBD6 (ENSBMUG00000025599) #21	DDIT3 (ENSBMUG00000025611) #22	MARS1 (ENSBMUG00000025649) #23	ARHGAP9 (ENSBMUG00000025668) #24	GLI1 (ENSBMUG00000025676) #25	INHBE (ENSBMUG00000025681) #26	INHBC (ENSBMUG00000025693) #27	R3HDM2 (ENSBMUG00000025750) #30	STAC3 (ENSBMUG00000025762) #31	ENSBMUG00000025768	SHMT2 (ENSBMUG00000025780) #33	NXPH4 (ENSBMUG00000025791) #34	LRP1 (ENSBMUG00000025810) #35	STAT6 (ENSBMUG00000025845) #37	NAB2 (ENSBMUG00000025857)	NEMP1 (ENSBMUG00000025867)	MYO1A (ENSBMUG00000025873)
Domestic yak	MODERN SPECIES	24	TSPAN31 (ENSBGRG00000008745) #9	AGAP2 (ENSBGRG00000008348) #10	OS9 (ENSBGRG00000007048) #11	SVIP (ENSBGRG00000012196)	B4GALNT1 (ENSBGRG00000011824) #12	ENSBGRG00000011631 #14	ENSBGRG00000011571 #14	ENSBGRG00000011446 #14	ARHGEF25 (ENSBGRG00000009681) #15	DTX3 (ENSBGRG00000009544) #16	PIP4K2C (ENSBGRG00000009271) #17	KIF5A (ENSBGRG00000008731) #19	DCTN2 (ENSBGRG00000008064) #20	MBD6 (ENSBGRG00000008007) #21	ENSBGRG00000007958	DDIT3 (ENSBGRG00000007918) #22	MARS1 (ENSBGRG00000007287) #23	ARHGAP9 (ENSBGRG00000006657) #24	GLI1 (ENSBGRG00000006415) #25	INHBE (ENSBGRG00000006369) #26	INHBC (ENSBGRG00000006332) #27	R3HDM2 (ENSBGRG00000005588) #30	STAC3 (ENSBGRG00000005393) #31	NDUFA4L2 (ENSBGRG00000005360) #32	SHMT2 (ENSBGRG00000005148) #33	NXPH4 (ENSBGRG00000005113) #34	LRP1 (ENSBGRG00000004617) #35	STAT6 (ENSBGRG00000004366) #37	NAB2 (ENSBGRG00000004277)	ENSBGRG00000004255	ENSBGRG00000004233
American bison	MODERN SPECIES	3043	MARCHF9 (ENSBBBG00000002098) #7	ENSBBBG00000011463 #8	TSPAN31 (ENSBBBG00000011496) #9	AGAP2 (ENSBBBG00000002118) #10	OS9 (ENSBBBG00000002166) #11	ENSBBBG00000011735	B4GALNT1 (ENSBBBG00000002179) #12	ENSBBBG00000007880 #14	ENSBBBG00000011770 #14	ARHGEF25 (ENSBBBG00000011821) #15	DTX3 (ENSBBBG00000011836) #16	PIP4K2C (ENSBBBG00000011867) #17	KIF5A (ENSBBBG00000002221) #19	ENSBBBG00000011973 #20	MBD6 (ENSBBBG00000011979) #21	DDIT3 (ENSBBBG00000006839) #22	MARS1 (ENSBBBG00000012001) #23	ARHGAP9 (ENSBBBG00000012058) #24	GLI1 (ENSBBBG00000002272) #25	INHBE (ENSBBBG00000012107) #26	INHBC (ENSBBBG00000012112) #27	R3HDM2 (ENSBBBG00000012343) #30	STAC3 (ENSBBBG00000009086) #31	NDUFA4L2 (ENSBBBG00000012377) #32	SHMT2 (ENSBBBG00000012405) #33	NXPH4 (ENSBBBG00000002374) #34	LRP1 (ENSBBBG00000012523) #35	STAT6 (ENSBBBG00000012670) #37	NAB2 (ENSBBBG00000001815)	ENSBBBG00000012717	NEMP1 (ENSBBBG00000012736)
Siberian musk deer	MODERN SPECIES	1241	METTL1 (ENSMMSG00000016085)	CYP27B1 (ENSMMSG00000016052)	MARCHF9 (ENSMMSG00000016028) #7	CDK4 (ENSMMSG00000015992) #8	TSPAN31 (ENSMMSG00000015914) #9	AGAP2 (ENSMMSG00000015750) #10	OS9 (ENSMMSG00000015546) #11	B4GALNT1 (ENSMMSG00000015445) #12	ENSMMSG00000015415 #14	ARHGEF25 (ENSMMSG00000015348) #15	DTX3 (ENSMMSG00000015304) #16	PIP4K2C (ENSMMSG00000015252) #17	KIF5A (ENSMMSG00000015037) #19	DCTN2 (ENSMMSG00000014950) #20	MBD6 (ENSMMSG00000014923) #21	DDIT3 (ENSMMSG00000014907) #22	MARS1 (ENSMMSG00000014842) #23	ARHGAP9 (ENSMMSG00000014297) #24	GLI1 (ENSMMSG00000014173) #25	INHBE (ENSMMSG00000014142) #26	INHBC (ENSMMSG00000014131) #27	R3HDM2 (ENSMMSG00000013912) #30	STAC3 (ENSMMSG00000013843) #31	NDUFA4L2 (ENSMMSG00000013824) #32	ENSMMSG00000013800 #33	NXPH4 (ENSMMSG00000013785) #34	LRP1 (ENSMMSG00000013521) #35	STAT6 (ENSMMSG00000016988) #37	NAB2 (ENSMMSG00000016947)	NEMP1 (ENSMMSG00000016873)	MYO1A (ENSMMSG00000016701)
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00950000185659	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Ursus	ANCESTRAL SPECIES	23	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
American black bear	MODERN SPECIES	3037				ENSUAMG00000025462 #11	B4GALNT1 (ENSUAMG00000025465) #12	ENSUAMG00000025474 #14	ENSUAMG00000025476	ENSUAMG00000025477	ARHGEF25 (ENSUAMG00000025480) #15	DTX3 (ENSUAMG00000025482) #16	PIP4K2C (ENSUAMG00000025483) #17	KIF5A (ENSUAMG00000025525) #19	ENSUAMG00000025650 #18	DCTN2 (ENSUAMG00000025652) #20	MBD6 (ENSUAMG00000025653) #21	DDIT3 (ENSUAMG00000025654) #22
Polar bear	MODERN SPECIES	113	CYP27B1 (ENSUMAG00000020107)	ENSUMAG00000020102 #7	CDK4 (ENSUMAG00000020099) #8	TSPAN31 (ENSUMAG00000020092) #9	AGAP2 (ENSUMAG00000020080) #10	OS9 (ENSUMAG00000020070) #11	ENSUMAG00000020063	ENSUMAG00000020057	ENSUMAG00000020053 #14	ARHGEF25 (ENSUMAG00000020041) #15	PIP4K2C (ENSUMAG00000019936) #17	ENSUMAG00000019911 #18	KIF5A (ENSUMAG00000019855) #19	DCTN2 (ENSUMAG00000019840) #20	MBD6 (ENSUMAG00000019835) #21	DDIT3 (ENSUMAG00000019833) #22	MARS1 (ENSUMAG00000019826) #23	ENSUMAG00000019819 #24	ARHGAP9 (ENSUMAG00000019809) #24	GLI1 (ENSUMAG00000019787) #25	INHBE (ENSUMAG00000019781) #26	INHBC (ENSUMAG00000019778) #27	R3HDM2 (ENSUMAG00000019179) #30	STAC3 (ENSUMAG00000019103) #31	NDUFA4L2 (ENSUMAG00000019098) #32	SHMT2 (ENSUMAG00000019095) #33	LRP1 (ENSUMAG00000018098) #35	STAT6 (ENSUMAG00000017856) #37	NAB2 (ENSUMAG00000017844)	NEMP1 (ENSUMAG00000017823)	MYO1A (ENSUMAG00000017779)
Giant Panda	MODERN SPECIES	6	METTL1 (ENSAMEG00000005428)	CYP27B1 (ENSAMEG00000005368)	MARCHF9 (ENSAMEG00000005329) #7	CDK4 (ENSAMEG00000005351) #8	TSPAN31 (ENSAMEG00000005333) #9	AGAP2 (ENSAMEG00000005291) #10	OS9 (ENSAMEG00000005249) #11	B4GALNT1 (ENSAMEG00000005224) #12	ENSAMEG00000005175 #14	ARHGEF25 (ENSAMEG00000005173) #15	PIP4K2C (ENSAMEG00000005130) #17	KIF5A (ENSAMEG00000005069) #19	DCTN2 (ENSAMEG00000005033) #20	MBD6 (ENSAMEG00000005029) #21	ENSAMEG00000029681	DDIT3 (ENSAMEG00000005026) #22	MARS1 (ENSAMEG00000004962) #23	ARHGAP9 (ENSAMEG00000004894) #24	GLI1 (ENSAMEG00000004878) #25	INHBE (ENSAMEG00000025669) #26	INHBC (ENSAMEG00000004873) #27	R3HDM2 (ENSAMEG00000004812) #30	STAC3 (ENSAMEG00000004787) #31	NDUFA4L2 (ENSAMEG00000004785) #32	SHMT2 (ENSAMEG00000004736) #33	NXPH4 (ENSAMEG00000026081) #34	LRP1 (ENSAMEG00000004561) #35	STAT6 (ENSAMEG00000004487) #37	NAB2 (ENSAMEG00000004458)	NEMP1 (ENSAMEG00000004429)	MYO1A (ENSAMEG00000004303)
Mustelinae	ANCESTRAL SPECIES	61	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Ferret	MODERN SPECIES	340	METTL1 (ENSMPUG00000002046)	CYP27B1 (ENSMPUG00000002045)	MARCHF9 (ENSMPUG00000002037) #7	CDK4 (ENSMPUG00000002016) #8	TSPAN31 (ENSMPUG00000002004) #9	AGAP2 (ENSMPUG00000002000) #10	OS9 (ENSMPUG00000001997) #11	B4GALNT1 (ENSMPUG00000001960) #12	ENSMPUG00000001927 #14	ARHGEF25 (ENSMPUG00000001923) #15	DTX3 (ENSMPUG00000001912) #16	PIP4K2C (ENSMPUG00000001852) #17	KIF5A (ENSMPUG00000001843) #19	DCTN2 (ENSMPUG00000001840) #20	MBD6 (ENSMPUG00000001837) #21	DDIT3 (ENSMPUG00000001835) #22	MARS1 (ENSMPUG00000001831) #23	ARHGAP9 (ENSMPUG00000001827) #24	GLI1 (ENSMPUG00000001825) #25	INHBC (ENSMPUG00000001822) #27	R3HDM2 (ENSMPUG00000001818) #30	STAC3 (ENSMPUG00000001790) #31	NDUFA4L2 (ENSMPUG00000001775) #32	SHMT2 (ENSMPUG00000001772) #33	NXPH4 (ENSMPUG00000001769) #34	LRP1 (ENSMPUG00000001753) #35	STAT6 (ENSMPUG00000001746) #37	NAB2 (ENSMPUG00000001738)	NEMP1 (ENSMPUG00000001732)	MYO1A (ENSMPUG00000001720)	TAC3 (ENSMPUG00000001702)
American mink	MODERN SPECIES	76	METTL1 (ENSNVIG00000003365)	CYP27B1 (ENSNVIG00000003343)	ENSNVIG00000003332 #7	CDK4 (ENSNVIG00000003287) #8	TSPAN31 (ENSNVIG00000003248) #9	AGAP2 (ENSNVIG00000003143) #10	OS9 (ENSNVIG00000002785) #11	B4GALNT1 (ENSNVIG00000002697) #12	ENSNVIG00000002655 #14	ARHGEF25 (ENSNVIG00000002561) #15	DTX3 (ENSNVIG00000002530) #16	PIP4K2C (ENSNVIG00000002463) #17	KIF5A (ENSNVIG00000002356) #19	DCTN2 (ENSNVIG00000002231) #20	MBD6 (ENSNVIG00000002218) #21	DDIT3 (ENSNVIG00000002208) #22	MARS1 (ENSNVIG00000002142) #23	ARHGAP9 (ENSNVIG00000002074) #24	GLI1 (ENSNVIG00000002001) #25	INHBE (ENSNVIG00000001991) #26	INHBC (ENSNVIG00000001984) #27	R3HDM2 (ENSNVIG00000001463) #30	STAC3 (ENSNVIG00000001387) #31	NDUFA4L2 (ENSNVIG00000001364) #32	SHMT2 (ENSNVIG00000001327) #33	LRP1 (ENSNVIG00000001177) #35	STAT6 (ENSNVIG00000000975) #37	NAB2 (ENSNVIG00000000943)	NEMP1 (ENSNVIG00000000911)	MYO1A (ENSNVIG00000000859)	TKNK (ENSNVIG00000000821)
Canidae	ANCESTRAL SPECIES	44	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427.r #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Canis_lupus	ANCESTRAL SPECIES	40	ENSGT00940000158208 #7	ENSGT00940000154770.hb #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT01050000248318	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427.r #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Dingo	MODERN SPECIES	374	MARCHF9 (ENSCAFG00020022859) #7	ENSCAFG00020022861 #8	TSPAN31 (ENSCAFG00020022882) #9	AGAP2 (ENSCAFG00020022888) #10	OS9 (ENSCAFG00020022924) #11	B4GALNT1 (ENSCAFG00020022927) #12	ENSCAFG00020022934	ENSCAFG00020022937 #13	ENSCAFG00020022938	ARHGEF25 (ENSCAFG00020022944) #15	DTX3 (ENSCAFG00020022956) #16	PIP4K2C (ENSCAFG00020022961) #17	KIF5A (ENSCAFG00020023042) #19	ENSCAFG00020023629 #20	MBD6 (ENSCAFG00020023648) #21	DDIT3 (ENSCAFG00020023658) #22	MARS1 (ENSCAFG00020023661) #23	ENSCAFG00020023667 #24	GLI1 (ENSCAFG00020023670) #25	INHBE (ENSCAFG00020023673) #26	INHBC (ENSCAFG00020023675) #27	R3HDM2 (ENSCAFG00020023713) #30	STAC3 (ENSCAFG00020023919) #31	NDUFA4L2 (ENSCAFG00020023921) #32	SHMT2 (ENSCAFG00020023922) #33	NXPH4 (ENSCAFG00020023924) #34	LRP1 (ENSCAFG00020023946) #35	STAT6 (ENSCAFG00020024215) #37	NAB2 (ENSCAFG00020024217)	NEMP1 (ENSCAFG00020024218)	MYO1A (ENSCAFG00020024230)
Dog	MODERN SPECIES	1	MARCHF9 (ENSCAFG00845013862) #7	CDK4 (ENSCAFG00845013840) #8	TSPAN31 (ENSCAFG00845013788) #9	AGAP2 (ENSCAFG00845013648) #10	ENSCAFG00845013582	OS9 (ENSCAFG00845013454) #11	B4GALNT1 (ENSCAFG00845013319) #12	ENSCAFG00845013288 #13	SLC26A10 (ENSCAFG00845013204) #14	ARHGEF25 (ENSCAFG00845013035) #15	DTX3 (ENSCAFG00845012960) #16	PIP4K2C (ENSCAFG00845012895) #17	KIF5A (ENSCAFG00845012531) #19	DCTN2 (ENSCAFG00845012256) #20	MBD6 (ENSCAFG00845012134) #21	DDIT3 (ENSCAFG00845012093) #22	MARS1 (ENSCAFG00845012016) #23	ARHGAP9 (ENSCAFG00845011922) #24	GLI1 (ENSCAFG00845011836) #25	INHBE (ENSCAFG00845011799) #26	INHBC (ENSCAFG00845011778) #27	R3HDM2 (ENSCAFG00845010738) #30	NDUFA4L2 (ENSCAFG00845010422) #32	SHMT2 (ENSCAFG00845010365) #33	NXPH4 (ENSCAFG00845010342) #34	LRP1 (ENSCAFG00845010106) #35	STAT6 (ENSCAFG00845009828) #37	NAB2 (ENSCAFG00845009686)	NEMP1 (ENSCAFG00845009633)	TAC3 (ENSCAFG00845009491)	ENSCAFG00845009429
Red fox	MODERN SPECIES	38	CYP27B1 (ENSVVUG00000016809)	CDK4 (ENSVVUG00000016816) #8	TSPAN31 (ENSVVUG00000016824) #9	AGAP2 (ENSVVUG00000016860) #10	OS9 (ENSVVUG00000017059) #11	B4GALNT1 (ENSVVUG00000017068) #12	ENSVVUG00000017075 #13	ENSVVUG00000017078 #14	ENSVVUG00000017087 #14	ARHGEF25 (ENSVVUG00000017093) #15	DTX3 (ENSVVUG00000017112) #16	PIP4K2C (ENSVVUG00000017117) #17	KIF5A (ENSVVUG00000017133) #19	ENSVVUG00000017190 #20	MBD6 (ENSVVUG00000017919) #21	DDIT3 (ENSVVUG00000017933) #22	MARS (ENSVVUG00000017940) #23	ENSVVUG00000017956 #24	GLI1 (ENSVVUG00000017973) #25	INHBE (ENSVVUG00000017976) #26	INHBC (ENSVVUG00000017986) #27	R3HDM2 (ENSVVUG00000018014) #30	ENSVVUG00000018131	SHMT2 (ENSVVUG00000018132) #33	NXPH4 (ENSVVUG00000018138) #34	LRP1 (ENSVVUG00000018159) #35	STAT6 (ENSVVUG00000018501) #37	NAB2 (ENSVVUG00000019302)	NEMP1 (ENSVVUG00000019316)	MYO1A (ENSVVUG00000019418)	ENSVVUG00000020802
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Panthera	ANCESTRAL SPECIES		ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Tiger	MODERN SPECIES	49	METTL1 (ENSPTIG00000012709)	CYP27B1 (ENSPTIG00000012402)	MARCHF9 (ENSPTIG00000012228) #7	CDK4 (ENSPTIG00000010434) #8	TSPAN31 (ENSPTIG00000008745) #9	AGAP2 (ENSPTIG00000006997) #10	OS9 (ENSPTIG00000012339) #11	B4GALNT1 (ENSPTIG00000010142) #12	ARHGEF25 (ENSPTIG00000000381) #15	DTX3 (ENSPTIG00000019850) #16	PIP4K2C (ENSPTIG00000017041) #17	ENSPTIG00000016848 #18	KIF5A (ENSPTIG00000013721) #19	DCTN2 (ENSPTIG00000010316) #20	MBD6 (ENSPTIG00000009087) #21	DDIT3 (ENSPTIG00000008446) #22	MARS1 (ENSPTIG00000006721) #23	ARHGAP9 (ENSPTIG00000021066) #24	GLI1 (ENSPTIG00000020218) #25	INHBE (ENSPTIG00000019611) #26	INHBC (ENSPTIG00000019195) #27
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00860000136110 #18	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
lion	MODERN SPECIES	7	CDK4 (ENSPLOG00000008199) #8	TSPAN31 (ENSPLOG00000008114) #9	AGAP2 (ENSPLOG00000007859) #10	OS9 (ENSPLOG00000007742) #11	B4GALNT1 (ENSPLOG00000007584) #12	ENSPLOG00000007537 #13	ENSPLOG00000007489 #14	ENSPLOG00000007432 #14	ARHGEF25 (ENSPLOG00000007298) #15	DTX3 (ENSPLOG00000007230) #16	PIP4K2C (ENSPLOG00000007188) #17	KIF5A (ENSPLOG00000006976) #19	DCTN2 (ENSPLOG00000006877) #20	MBD6 (ENSPLOG00000006805) #21	ENSPLOG00000006782	DDIT3 (ENSPLOG00000006761) #22	MARS1 (ENSPLOG00000006701) #23	ARHGAP9 (ENSPLOG00000006465) #24	GLI1 (ENSPLOG00000006294) #25	INHBE (ENSPLOG00000006258) #26	INHBC (ENSPLOG00000014013) #27	R3HDM2 (ENSPLOG00000013644) #30	STAC3 (ENSPLOG00000013483) #31	NDUFA4L2 (ENSPLOG00000013393) #32	SHMT2 (ENSPLOG00000013189) #33	NXPH4 (ENSPLOG00000013138) #34	LRP1 (ENSPLOG00000012269) #35	STAT6 (ENSPLOG00000012048) #37	NAB2 (ENSPLOG00000011892)	MYO1A (ENSPLOG00000011602)	TAC3 (ENSPLOG00000011494)
leopard	MODERN SPECIES	27	MARCHF9 (ENSPPRG00000012795) #7	CDK4 (ENSPPRG00000013706) #8	TSPAN31 (ENSPPRG00000016645) #9	AGAP2 (ENSPPRG00000018437) #10	OS9 (ENSPPRG00000000870) #11	B4GALNT1 (ENSPPRG00000002321) #12	ENSPPRG00000002448 #13	ENSPPRG00000003343 #14	ARHGEF25 (ENSPPRG00000004548) #15	DTX3 (ENSPPRG00000005051) #16	PIP4K2C (ENSPPRG00000007115) #17	ENSPPRG00000007974 #18	KIF5A (ENSPPRG00000011745) #19	DCTN2 (ENSPPRG00000015041) #20	MBD6 (ENSPPRG00000016575) #21	DDIT3 (ENSPPRG00000019481) #22	MARS1 (ENSPPRG00000023243) #23	ARHGAP9 (ENSPPRG00000004267) #24	GLI1 (ENSPPRG00000005668) #25	INHBE (ENSPPRG00000006149) #26	INHBC (ENSPPRG00000006339) #27	R3HDM2 (ENSPPRG00000009240) #30	STAC3 (ENSPPRG00000009695) #31	NDUFA4L2 (ENSPPRG00000010214) #32	SHMT2 (ENSPPRG00000013185) #33	NXPH4 (ENSPPRG00000013279) #34	LRP1 (ENSPPRG00000002876) #35	STAT6 (ENSPPRG00000006529) #37	NAB2 (ENSPPRG00000007034)	NEMP1 (ENSPPRG00000008388)	MYO1A (ENSPPRG00000010635)
Cat	MODERN SPECIES	238	CYP27B1 (ENSFCAG00000014701)	MARCHF9 (ENSFCAG00000045499) #7	CDK4 (ENSFCAG00000029663) #8	TSPAN31 (ENSFCAG00000026400) #9	AGAP2 (ENSFCAG00000014695) #10	OS9 (ENSFCAG00000014691) #11	SLC26A10 (ENSFCAG00000030779) #14	ARHGEF25 (ENSFCAG00000002089) #15	B4GALNT1 (ENSFCAG00000002090) #12	DTX3 (ENSFCAG00000002088) #16	PIP4K2C (ENSFCAG00000030052) #17	KIF5A (ENSFCAG00000002087) #19	DCTN2 (ENSFCAG00000002086) #20	MBD6 (ENSFCAG00000030572) #21	ENSFCAG00000052285	DDIT3 (ENSFCAG00000002084) #22	MARS1 (ENSFCAG00000002083) #23	ARHGAP9 (ENSFCAG00000002082) #24	GLI1 (ENSFCAG00000002081) #25	INHBE (ENSFCAG00000003217) #26	INHBC (ENSFCAG00000032733) #27	R3HDM2 (ENSFCAG00000000192) #30	STAC3 (ENSFCAG00000000190) #31	NDUFA4L2 (ENSFCAG00000000189) #32	SHMT2 (ENSFCAG00000000188) #33	NXPH4 (ENSFCAG00000045731) #34	LRP1 (ENSFCAG00000000185) #35	STAT6 (ENSFCAG00000014571) #37	NAB2 (ENSFCAG00000022519)	NEMP1 (ENSFCAG00000024952)	MYO1A (ENSFCAG00000014568)
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Equus	ANCESTRAL SPECIES	43	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00910000147433 #13	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Horse	MODERN SPECIES	27	MARCHF9 (ENSECAG00000025138) #7	CDK4 (ENSECAG00000025015) #8	TSPAN31 (ENSECAG00000024982) #9	ENSECAG00000057561	AGAP2 (ENSECAG00000023952) #10	OS9 (ENSECAG00000022388) #11	B4GALNT1 (ENSECAG00000021591) #12	ENSECAG00000038087 #13	SLC26A10 (ENSECAG00000019756) #14	ARHGEF25 (ENSECAG00000017139) #15	DTX3 (ENSECAG00000015476) #16	PIP4K2C (ENSECAG00000013449) #17	KIF5A (ENSECAG00000006866) #19	DCTN2 (ENSECAG00000022334) #20	MBD6 (ENSECAG00000021290) #21	DDIT3 (ENSECAG00000020535) #22	MARS1 (ENSECAG00000015175) #23	ARHGAP9 (ENSECAG00000011864) #24	GLI1 (ENSECAG00000011246) #25	INHBC (ENSECAG00000010945) #27	R3HDM2 (ENSECAG00000003157) #30	STAC3 (ENSECAG00000023923) #31	NDUFA4L2 (ENSECAG00000023525) #32	SHMT2 (ENSECAG00000021295) #33	NXPH4 (ENSECAG00000006133) #34	LRP1 (ENSECAG00000012166) #35	STAT6 (ENSECAG00000008705) #37	NAB2 (ENSECAG00000006453)	NEMP1 (ENSECAG00000023977)	MYO1A (ENSECAG00000021228)	ENSECAG00000035776
Donkey	MODERN SPECIES	14	CYP27B1 (ENSEASG00005007282)	MARCHF9 (ENSEASG00005032907) #7	CDK4 (ENSEASG00005007275) #8	TSPAN31 (ENSEASG00005033639) #9	AGAP2 (ENSEASG00005007244) #10	OS9 (ENSEASG00005007240) #11	B4GALNT1 (ENSEASG00005007237) #12	ENSEASG00005033455 #14	ARHGEF25 (ENSEASG00005007226) #15	DTX3 (ENSEASG00005007224) #16	PIP4K2C (ENSEASG00005007222) #17	KIF5A (ENSEASG00005007219) #19	ENSEASG00005034175 #18	DCTN2 (ENSEASG00005007217) #20	MBD6 (ENSEASG00005007215) #21	DDIT3 (ENSEASG00005007212) #22	MARS1 (ENSEASG00005007208) #23	ARHGAP9 (ENSEASG00005007170) #24	GLI1 (ENSEASG00005007134) #25	INHBE (ENSEASG00005032749) #26	INHBC (ENSEASG00005032719) #27	R3HDM2 (ENSEASG00005007091) #30	STAC3 (ENSEASG00005007072) #31	NDUFA4L2 (ENSEASG00005038366) #32	SHMT2 (ENSEASG00005007060) #33	NXPH4 (ENSEASG00005038262) #34	LRP1 (ENSEASG00005006612) #35	STAT6 (ENSEASG00005006402) #37	NAB2 (ENSEASG00005006368)	NEMP1 (ENSEASG00005006360)	MYO1A (ENSEASG00005006355)
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Greater horseshoe bat	MODERN SPECIES	1	METTL1 (ENSRFEG00010017174)	CYP27B1 (ENSRFEG00010017027)	MARCHF9 (ENSRFEG00010016968) #7	CDK4 (ENSRFEG00010016927) #8	TSPAN31 (ENSRFEG00010016812) #9	AGAP2 (ENSRFEG00010016731) #10	OS9 (ENSRFEG00010016224) #11	B4GALNT1 (ENSRFEG00010016048) #12	ENSRFEG00010016009 #14	ARHGEF25 (ENSRFEG00010015714) #15	DTX3 (ENSRFEG00010015618) #16	PIP4K2C (ENSRFEG00010015482) #17	KIF5A (ENSRFEG00010014988) #19	DCTN2 (ENSRFEG00010014458) #20	MBD6 (ENSRFEG00010014397) #21	DDIT3 (ENSRFEG00010014315) #22	MARS1 (ENSRFEG00010014176) #23	ARHGAP9 (ENSRFEG00010014003) #24	GLI1 (ENSRFEG00010013635) #25	INHBE (ENSRFEG00010013569) #26	INHBC (ENSRFEG00010013503) #27	R3HDM2 (ENSRFEG00010013259) #30	STAC3 (ENSRFEG00010013129) #31	NDUFA4L2 (ENSRFEG00010013025) #32	SHMT2 (ENSRFEG00010012928) #33	NXPH4 (ENSRFEG00010012875) #34	LRP1 (ENSRFEG00010011635) #35	STAT6 (ENSRFEG00010011526) #37	NAB2 (ENSRFEG00010011442)	ENSRFEG00010011417	NEMP1 (ENSRFEG00010011322)
Microbat	MODERN SPECIES	1056	EEF1AKMT3 (ENSMLUG00000005939)	METTL1 (ENSMLUG00000005935)	CYP27B1 (ENSMLUG00000005927)	MARCHF9 (ENSMLUG00000005921) #7	ENSMLUG00000023651 #8	TSPAN31 (ENSMLUG00000005915) #9	AGAP2 (ENSMLUG00000008775) #10	OS9 (ENSMLUG00000005905) #11	B4GALNT1 (ENSMLUG00000002578) #12	ENSMLUG00000030169 #14	ARHGEF25 (ENSMLUG00000001115) #15	DTX3 (ENSMLUG00000001110) #16	PIP4K2C (ENSMLUG00000001102) #17	KIF5A (ENSMLUG00000001079) #19	DCTN2 (ENSMLUG00000001065) #20	DDIT3 (ENSMLUG00000001055) #22	MARS1 (ENSMLUG00000001037) #23	ARHGAP9 (ENSMLUG00000001022) #24	GLI1 (ENSMLUG00000001013) #25	INHBE (ENSMLUG00000001009) #26	INHBC (ENSMLUG00000001006) #27	R3HDM2 (ENSMLUG00000004980) #30	STAC3 (ENSMLUG00000004969) #31	NDUFA4L2 (ENSMLUG00000004963) #32	SHMT2 (ENSMLUG00000004955) #33	ENSMLUG00000006731 #35	ENSMLUG00000030361	STAT6 (ENSMLUG00000006689) #37	NAB2 (ENSMLUG00000006662)	NEMP1 (ENSMLUG00000000419)	MYO1A (ENSMLUG00000000404)
Megabat	MODERN SPECIES	2431	EEF1AKMT3 (ENSPVAG00000012137)	METTL1 (ENSPVAG00000012136)	CYP27B1 (ENSPVAG00000012133)	MARCHF9 (ENSPVAG00000012132) #7	CDK4 (ENSPVAG00000012131) #8	TSPAN31 (ENSPVAG00000012129) #9	AGAP2 (ENSPVAG00000012128) #10	OS9 (ENSPVAG00000012127) #11	B4GALNT1 (ENSPVAG00000012126) #12	ARHGEF25 (ENSPVAG00000012125) #15	DTX3 (ENSPVAG00000012124) #16	PIP4K2C (ENSPVAG00000012123) #17	KIF5A (ENSPVAG00000012121) #19	DCTN2 (ENSPVAG00000012120) #20	MBD6 (ENSPVAG00000012115) #21	DDIT3 (ENSPVAG00000012114) #22	MARS1 (ENSPVAG00000012112) #23	ARHGAP9 (ENSPVAG00000012110) #24	GLI1 (ENSPVAG00000012109) #25	INHBE (ENSPVAG00000012108) #26	INHBC (ENSPVAG00000012107) #27
Eulipotyphla	ANCESTRAL SPECIES	940																ENSGT00390000006305 #22	ENSGT00550000075017 #23
Common shrew	MODERN SPECIES	4815																DDIT3 (ENSSARG00000002536) #22	MARS1 (ENSSARG00000002477) #23
Hedgehog	MODERN SPECIES	6166																DDIT3 (ENSEEUG00000003634) #22	MARS1 (ENSEEUG00000015503) #23
Atlantogenata	ANCESTRAL SPECIES	16	ENSGT00390000017840.f	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Afrotheria	ANCESTRAL SPECIES	8	ENSGT00390000017840.f	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Afrotheria_a	ANCESTRAL SPECIES	8	ENSGT00390000017840.f	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Elephant	MODERN SPECIES	196	MARCHF9 (ENSLAFG00000010786) #7	CDK4 (ENSLAFG00000010784) #8	TSPAN31 (ENSLAFG00000025821) #9	AGAP2 (ENSLAFG00000009533) #10	OS9 (ENSLAFG00000013727) #11	ENSLAFG00000020871	B4GALNT1 (ENSLAFG00000023052) #12	ENSLAFG00000031829 #14	ENSLAFG00000027341 #14	ARHGEF25 (ENSLAFG00000013560) #15	DTX3 (ENSLAFG00000032565) #16	PIP4K2C (ENSLAFG00000015355) #17	KIF5A (ENSLAFG00000013547) #19	DCTN2 (ENSLAFG00000013538) #20	MBD6 (ENSLAFG00000013528) #21	DDIT3 (ENSLAFG00000030970) #22	MARS1 (ENSLAFG00000013525) #23	ARHGAP9 (ENSLAFG00000013515) #24	GLI1 (ENSLAFG00000022910) #25	INHBE (ENSLAFG00000007955) #26	INHBC (ENSLAFG00000007954) #27	R3HDM2 (ENSLAFG00000006510) #30	STAC3 (ENSLAFG00000006507) #31	NDUFA4L2 (ENSLAFG00000021950) #32	SHMT2 (ENSLAFG00000011532) #33	NXPH4 (ENSLAFG00000011528) #34	LRP1 (ENSLAFG00000005976) #35	STAT6 (ENSLAFG00000005970) #37	NAB2 (ENSLAFG00000032283)	NEMP1 (ENSLAFG00000017999)	MYO1A (ENSLAFG00000017988)
Hyrax	MODERN SPECIES	5769												PIP4K2C (ENSPCAG00000016465) #17	KIF5A (ENSPCAG00000016325) #19	DCTN2 (ENSPCAG00000016236) #20	MBD6 (ENSPCAG00000016174) #21	DDIT3 (ENSPCAG00000016158) #22	MARS1 (ENSPCAG00000016037) #23	ARHGAP9 (ENSPCAG00000015865) #24	GLI1 (ENSPCAG00000015756) #25	INHBE (ENSPCAG00000015741) #26	INHBC (ENSPCAG00000015710) #27
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	16936																ENSETEG00000007110 #22	MARS1 (ENSETEG00000007106) #23
Tenrec	MODERN SPECIES	15393																ENSETEG00000002521 #22
Xenarthra	ANCESTRAL SPECIES	111	ENSGT00390000016293	ENSGT00940000161297	ENSGT00390000017840.f	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27
Armadillo	MODERN SPECIES	4270	TSFM (ENSDNOG00000049415)	EEF1AKMT3 (ENSDNOG00000017736)	METTL1 (ENSDNOG00000042518)	CYP27B1 (ENSDNOG00000036581)	MARCHF9 (ENSDNOG00000014256) #7	ENSDNOG00000014245 #8	TSPAN31 (ENSDNOG00000039295) #9	AGAP2 (ENSDNOG00000009226) #10	OS9 (ENSDNOG00000014214) #11	ENSDNOG00000043472 #12	ENSDNOG00000046438 #14	ARHGEF25 (ENSDNOG00000012033) #15	KIF5A (ENSDNOG00000017509) #19	DCTN2 (ENSDNOG00000017506) #20	MBD6 (ENSDNOG00000038234) #21	DDIT3 (ENSDNOG00000017504) #22	MARS1 (ENSDNOG00000017502) #23	ARHGAP9 (ENSDNOG00000017510) #24	GLI1 (ENSDNOG00000017512) #25	INHBE (ENSDNOG00000046385) #26	INHBC (ENSDNOG00000039649) #27
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351.u #9	ENSGT00940000158956 #10	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00860000136110 #18	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT01010000223049	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000162107 #26	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
koala	MODERN SPECIES	37	MARCHF9 (ENSPCIG00000023638) #7	CDK4 (ENSPCIG00000023641) #8	ENSPCIG00000023650 #9	AGAP2 (ENSPCIG00000023660) #10	OS9 (ENSPCIG00000023673) #11	B4GALNT1 (ENSPCIG00000023684) #12	ENSPCIG00000023690 #14	ARHGEF25 (ENSPCIG00000023702) #15	DTX3 (ENSPCIG00000023715) #16	PIP4K2C (ENSPCIG00000023719) #17	ENSPCIG00000023748 #18	KIF5A (ENSPCIG00000023724) #19	DCTN2 (ENSPCIG00000023750) #20	MBD6 (ENSPCIG00000035072) #21	ENSPCIG00000033705	DDIT3 (ENSPCIG00000023760) #22	MARS1 (ENSPCIG00000023765) #23	ARHGAP9 (ENSPCIG00000023775) #24	GLI1 (ENSPCIG00000023779) #25	INHBE (ENSPCIG00000036293) #26	INHBC (ENSPCIG00000023792) #27	R3HDM2 (ENSPCIG00000023841) #30	STAC3 (ENSPCIG00000024384) #31	NDUFA4L2 (ENSPCIG00000032569) #32	SHMT2 (ENSPCIG00000024398) #33	NXPH4 (ENSPCIG00000035483) #34	LRP1 (ENSPCIG00000024483) #35	STAT6 (ENSPCIG00000024615) #37	NAB2 (ENSPCIG00000024618)	NEMP1 (ENSPCIG00000024619)	MYO1A (ENSPCIG00000024623)
Common wonbat	MODERN SPECIES	682	CYP27B1 (ENSVURG00010022922)	MARCHF9 (ENSVURG00010022931) #7	CDK4 (ENSVURG00010022937) #8	ENSVURG00010022945 #9	AGAP2 (ENSVURG00010022956) #10	OS9 (ENSVURG00010022976) #11	B4GALNT1 (ENSVURG00010022992) #12	ENSVURG00010023000 #14	ARHGEF25 (ENSVURG00010023020) #15	DTX3 (ENSVURG00010023053) #16	PIP4K2C (ENSVURG00010023060) #17	KIF5A (ENSVURG00010023077) #19	ENSVURG00010023090 #18	DCTN2 (ENSVURG00010023094) #20	MBD6 (ENSVURG00010023098) #21	DDIT3 (ENSVURG00010023101) #22	MARS1 (ENSVURG00010023107) #23	ARHGAP9 (ENSVURG00010023126) #24	GLI1 (ENSVURG00010023170) #25	INHBE (ENSVURG00010023172) #26	INHBC (ENSVURG00010023176) #27	R3HDM2 (ENSVURG00010023179) #30	STAC3 (ENSVURG00010023194) #31	ENSVURG00010023200 #32	SHMT2 (ENSVURG00010023203) #33	NXPH4 (ENSVURG00010023207) #34	LRP1 (ENSVURG00010023315) #35	STAT6 (ENSVURG00010023612) #37	NAB2 (ENSVURG00010023614)	NEMP1 (ENSVURG00010023617)	MYO1A (ENSVURG00010023618)
Wallaby	MODERN SPECIES	7459														DCTN2 (ENSMEUG00000007250) #20	MBD6 (ENSMEUG00000007228) #21	DDIT3 (ENSMEUG00000007221) #22	MARS1 (ENSMEUG00000007195) #23
Tasmanian devil	MODERN SPECIES	4	TSFM (ENSSHAG00000009664)	EEF1AKMT3 (ENSSHAG00000032211)	MARCHF9 (ENSSHAG00000028869) #7	CYP27B1 (ENSSHAG00000009490)	CDK4 (ENSSHAG00000009373) #8	AGAP2 (ENSSHAG00000009154) #10	OS9 (ENSSHAG00000008926) #11	B4GALNT1 (ENSSHAG00000008335) #12	ENSSHAG00000024394 #14	DTX3 (ENSSHAG00000022339) #16	ARHGEF25 (ENSSHAG00000025480) #15	KIF5A (ENSSHAG00000007673) #19	PIP4K2C (ENSSHAG00000027181) #17	DCTN2 (ENSSHAG00000027705) #20	MBD6 (ENSSHAG00000007377) #21	DDIT3 (ENSSHAG00000025845) #22	MARS1 (ENSSHAG00000007182) #23	ENSSHAG00000006839 #24	GLI1 (ENSSHAG00000006652) #25	INHBE (ENSSHAG00000006556) #26	INHBC (ENSSHAG00000006461) #27	R3HDM2 (ENSSHAG00000003511) #30	STAC3 (ENSSHAG00000021481) #31	NDUFA4L2 (ENSSHAG00000029208) #32	SHMT2 (ENSSHAG00000002708) #33	LRP1 (ENSSHAG00000007379) #35	STAT6 (ENSSHAG00000006372) #37	NAB2 (ENSSHAG00000006277)	NEMP1 (ENSSHAG00000005742)	MYO1A (ENSSHAG00000005404)	TAC3 (ENSSHAG00000005021)
Platypus	MODERN SPECIES	1	CTDSP2 (ENSOANG00000002186)	TSFM (ENSOANG00000036302)	ENSOANG00000040518	ENSOANG00000044441	CYP27B1 (ENSOANG00000039294)	MARCHF9 (ENSOANG00000038668) #7	TSPAN31 (ENSOANG00000042464) #9	AGAP2 (ENSOANG00000038152) #10	ENSOANG00000030032 #11	B4GALNT1 (ENSOANG00000043004) #12	ENSOANG00000037226 #15	DTX3 (ENSOANG00000040876) #16	PIP4K2C (ENSOANG00000039694) #17	KIF5A (ENSOANG00000046887) #19	DCTN2 (ENSOANG00000037321) #20	ENSOANG00000046641 #22	MARS1 (ENSOANG00000013318) #23	ARHGAP9 (ENSOANG00000030220) #24	INHBE (ENSOANG00000043557) #26	ENSOANG00000039683 #27	STAC3 (ENSOANG00000038086) #31	NDUFA4L2 (ENSOANG00000044477) #32	SHMT2 (ENSOANG00000047243) #33	ENSOANG00000051029	ENSOANG00000040423 ##35	STAT6 (ENSOANG00000049497) #37	NAB2 (ENSOANG00000048993)	NEMP1 (ENSOANG00000040767)	MYO1A (ENSOANG00000044794)	GPR182 (ENSOANG00000044878)	ENSOANG00000043202
Sauria	ANCESTRAL SPECIES	25	ENSGT00940000158956 #10	ENSGT00940000164002.h	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000166618	ENSGT00940000154766.a.b	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Archelosauria	ANCESTRAL SPECIES	26	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00940000164002.h	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000166618	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00980000200282	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Cryptodira	ANCESTRAL SPECIES	25	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00940000164002.h	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000166618	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Testudinoidea	ANCESTRAL SPECIES	21	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00940000164002.h	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000166618	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a.d #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Emydidae	ANCESTRAL SPECIES	34	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00940000164002.h	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT00950000185610	ENSGT01070000253775.a.d.b #14	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00980000200282	ENSGT00940000159439 #19	ENSGT00390000003427.e #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23
painted turtle	MODERN SPECIES	2396	TSPAN31 (ENSCPBG00000018040) #9	AGAP2 (ENSCPBG00000018031) #10	ENSCPBG00000018030	ENSCPBG00000018028	OS9 (ENSCPBG00000018025) #11	B4GALNT1 (ENSCPBG00000018024) #12	ENSCPBG00000018022	ENSCPBG00000018021 #14	ENSCPBG00000018019	ENSCPBG00000018016	DTX3 (ENSCPBG00000018015) #16	PIP4K2C (ENSCPBG00000018014) #17	ENSCPBG00000018013	KIF5A (ENSCPBG00000017549) #19	DCTN2 (ENSCPBG00000017513) #20	DDIT3 (ENSCPBG00000017509) #22	MARS1 (ENSCPBG00000017136) #23	ESYT2 (ENSCPBG00000017111)	VIPR2 (ENSCPBG00000017106)	ZMYND11 (ENSCPBG00000017099)	DIP2C (ENSCPBG00000017077)	ENSCPBG00000017065	LARP4B (ENSCPBG00000017063)	WDR37 (ENSCPBG00000017059)	ADARB2 (ENSCPBG00000017055)	PFKP (ENSCPBG00000017048)	PITRM1 (ENSCPBG00000017045)	KLF6 (ENSCPBG00000017044)	FZD8 (ENSCPBG00000017040)	GJD4 (ENSCPBG00000017039)	CCNY (ENSCPBG00000017038)
Three-toed box turtle	MODERN SPECIES	2258																DDIT3 (ENSTMTG00000010156) #22	ENSTMTG00000010170
Testudinidae	ANCESTRAL SPECIES	25	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00940000164002.h	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000166618	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00390000002762.a.a.d #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b.a #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335	ENSGT00940000160722
Abingdon island giant tortoise	MODERN SPECIES	2749				ENSCABG00000014421	ENSCABG00000014425	OS9 (ENSCABG00000014428) #11	B4GALNT1 (ENSCABG00000014434) #12	ENSCABG00000014442 #14	ENSCABG00000014444	ENSCABG00000014445	DTX3 (ENSCABG00000014449) #16	PIP4K2C (ENSCABG00000014460) #17	KIF5A (ENSCABG00000014465) #19	DCTN2 (ENSCABG00000014482) #20	ENSCABG00000014488 #21	DDIT3 (ENSCABG00000014490) #22	MARS1 (ENSCABG00000014493) #23	ENSCABG00000014499 #24	GLI1 (ENSCABG00000014503) #25	ENSCABG00000014511 #27	ENSCABG00000014513 #27	ENSCABG00000014514
Goode s thornscrub tortoise	MODERN SPECIES	17	TSPAN31 (ENSGEVG00005017908) #9	AGAP2 (ENSGEVG00005017968) #10	ENSGEVG00005018225	ENSGEVG00005018249	ENSGEVG00005018277	OS9 (ENSGEVG00005018309) #11	B4GALNT1 (ENSGEVG00005018345) #12	ENSGEVG00005018419 #14	ENSGEVG00005018451	ENSGEVG00005018469	DTX3 (ENSGEVG00005018503) #16	PIP4K2C (ENSGEVG00005018526) #17	KIF5A (ENSGEVG00005018593) #19	ENSGEVG00005018773	DCTN2 (ENSGEVG00005018794) #20	DDIT3 (ENSGEVG00005018810) #22	MARS1 (ENSGEVG00005018830) #23	ARHGAP9 (ENSGEVG00005018870) #24	GLI1 (ENSGEVG00005018906) #25	ENSGEVG00005018929	ENSGEVG00005018942 #27	INHBC (ENSGEVG00005018957) #27	R3HDM2 (ENSGEVG00005018981) #30	STAC3 (ENSGEVG00005019020) #31	SHMT2 (ENSGEVG00005000136) #33	NXPH4 (ENSGEVG00005000164) #34	LRP1 (ENSGEVG00005000600) #35	STAT6 (ENSGEVG00005001199) #37	ENSGEVG00005001231	NAB2 (ENSGEVG00005001257)	NEMP1 (ENSGEVG00005001310)
Chinese turtle	MODERN SPECIES	9																DDIT3 (ENSPSIG00000005838) #22	MARS1 (ENSPSIG00000013607) #23	ENSPSIG00000012866
Archosauria	ANCESTRAL SPECIES	33	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000158208 #7	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000158956 #10	ENSGT00940000164002.h	ENSGT00530000063603.A #11	ENSGT01000000215164	ENSGT00390000006679.a #12	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT01070000256145	ENSGT00950000182860.a.b.a #24
Aves	ANCESTRAL SPECIES	41	ENSGT00940000157629	ENSGT00950000183072.b.a	ENSGT00950000183167.a.b.b.b	ENSGT00940000155330	ENSGT01040000240451.a.b.a	ENSGT00390000016293	ENSGT00940000161297	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT01070000256145	ENSGT00950000182860.a.b.a #24
Neognathae	ANCESTRAL SPECIES	40	ENSGT00940000160106	ENSGT00940000157629	ENSGT00950000183072.b.a	ENSGT00950000183167.a.b.b.b	ENSGT00940000155330	ENSGT00390000016293	ENSGT00940000161297	ENSGT00390000017840	ENSGT00950000182905.a.a.b	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT01070000256145	ENSGT00950000182860.a.b.a #24
Galloanserae	ANCESTRAL SPECIES	125																ENSGT00390000006305 #22	ENSGT00550000075017 #23
Anatidae	ANCESTRAL SPECIES	181																ENSGT00390000006305 #22	ENSGT00550000075017 #23
Pink-footed goose	MODERN SPECIES	692																DDIT3 (ENSABRG00000005482) #22	MARS1 (ENSABRG00000005487) #23	ENSABRG00000005502	ARHGAP9 (ENSABRG00000005544) #24	ENSABRG00000005581
Neognathae_b	ANCESTRAL SPECIES	37												ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000182905.a.a.b	ENSGT00390000017840	ENSGT00940000161297	ENSGT00390000016293	ENSGT00940000155330	ENSGT00950000183167.a.b.b.b	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00950000185372	ENSGT00390000000685	ENSGT00390000010077	ENSGT00950000182882.A.a
Passeriformes	ANCESTRAL SPECIES	32													ENSGT01030000234815	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00390000010077	ENSGT00950000182882.A.a	ENSGT01030000234528.B.b.a.a.a	ENSGT00940000160845	ENSGT00940000157422	ENSGT00960000187237	ENSGT00940000161557.b	ENSGT00940000160612.d	ENSGT01050000244890.a.b.b	ENSGT00940000153993.B
Great tit	MODERN SPECIES	319														ENSPMJG00000013322	DCTN2 (ENSPMJG00000013321) #20	DDIT3 (ENSPMJG00000013319) #22	MARS1 (ENSPMJG00000013318) #23	CSRNP2 (ENSPMJG00000013317)
Neognathae_c	ANCESTRAL SPECIES	93																ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24
Golden eagle	MODERN SPECIES	6	GCLC (ENSACCG00020009005)	KLHL31 (ENSACCG00020009029)	ENSACCG00020009040	LRRC1 (ENSACCG00020009094)	MLIP (ENSACCG00020009195)	TINAG (ENSACCG00020009242)	FAM83B (ENSACCG00020009267)	HCRTR2 (ENSACCG00020009292)	GFRAL (ENSACCG00020009325)	HMGCLL1 (ENSACCG00020009341)	BMP5 (ENSACCG00020009354)	ENSACCG00020009368	ENSACCG00020009392	DST (ENSACCG00020014224)	BEND6 (ENSACCG00020016641)	DDIT3 (ENSACCG00020016642) #22	MARS1 (ENSACCG00020016651) #23	ARHGAP9 (ENSACCG00020016663) #24	ENSACCG00020016675 #20	ENSACCG00020016685	ENSACCG00020016689	MFSD5 (ENSACCG00020016694)	RARG (ENSACCG00020016698)	ITGB7 (ENSACCG00020016705)	ZNF740 (ENSACCG00020016710)	ENSACCG00020016716	ENSACCG00020016721	KRT18 (ENSACCG00020016725)	ENSACCG00020016728	ENSACCG00020016735	ENSACCG00020016740
Kakapo	MODERN SPECIES	15	ASIC1 (ENSSHBG00005010353)	SMARCD1 (ENSSHBG00005010382)	GPD1 (ENSSHBG00005010424)	ENSSHBG00005010452	CERS5 (ENSSHBG00005010483)	LIMA1 (ENSSHBG00005010576)	LARP4 (ENSSHBG00005010760)	DIP2B (ENSSHBG00005012919)	ENSSHBG00005020080	ENSSHBG00005020089	ENSSHBG00005020097	ENSSHBG00005020106	ENSSHBG00005020123	ENSSHBG00005020162	DTX3 (ENSSHBG00005020166) #16	DDIT3 (ENSSHBG00005020168) #22	MARS1 (ENSSHBG00005020180) #23	DCTN2 (ENSSHBG00005020229) #20	KIF5A (ENSSHBG00005020238) #19	PIP4K2C (ENSSHBG00005020243) #17	B4GALNT1 (ENSSHBG00005020247) #12	ENSSHBG00005020257	ENSSHBG00005020264	ENSSHBG00005020270	ENSSHBG00005020284	CYP27B1 (ENSSHBG00005020336)	METTL1 (ENSSHBG00005020338)	ENSSHBG00005020342	TSFM (ENSSHBG00005020343)	SLC11A2 (ENSSHBG00005020345)	LETMD1 (ENSSHBG00005020353)
Lepidosauria	ANCESTRAL SPECIES	104					ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000155890.l	ENSGT00940000160528
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000155890.l	ENSGT00940000160528
Argentine black and white tegu	MODERN SPECIES	18	GMIP (ENSSMRG00000000145)	NXNL1 (ENSSMRG00000000185)	SLC27A1 (ENSSMRG00000000192)	PGLS (ENSSMRG00000000257)	COLGALT1 (ENSSMRG00000000279)	ENSSMRG00000000299	ENSSMRG00000000322	ENSSMRG00000000349	ARHGEF25 (ENSSMRG00000000369) #15	DTX3 (ENSSMRG00000000517) #16	PIP4K2C (ENSSMRG00000000530) #17	KIF5A (ENSSMRG00000000560) #19	ENSSMRG00000000611	DCTN2 (ENSSMRG00000000617) #20	MBD6 (ENSSMRG00000000629) #21	DDIT3 (ENSSMRG00000000649) #22	MARS1 (ENSSMRG00000000656) #23	ENSSMRG00000000725 #24	GLI1 (ENSSMRG00000000747) #25	INHBC (ENSSMRG00000000788) #27	R3HDM2 (ENSSMRG00000000797) #30	STAC3 (ENSSMRG00000000905) #31	NDUFA4L2 (ENSSMRG00000000941) #32	SHMT2 (ENSSMRG00000000973) #33	NXPH4 (ENSSMRG00000001001) #34	LRP1 (ENSSMRG00000001147) #35	STAT6 (ENSSMRG00000001312) #37	NAB2 (ENSSMRG00000001342)	NEMP1 (ENSSMRG00000001343)	ENSSMRG00000001346	SPRYD3 (ENSSMRG00000001349)
Common wall lizard	MODERN SPECIES	10	INPP1 (ENSPMRG00000020184)	ESYT1 (ENSPMRG00000020150)	ENSPMRG00000020131	ENSPMRG00000020127	SMARCC2 (ENSPMRG00000020055)	OS9 (ENSPMRG00000019992) #11	B4GALNT1 (ENSPMRG00000019981) #12	ENSPMRG00000019968 #14	ENSPMRG00000019962	ARHGEF25 (ENSPMRG00000019904) #15	ENSPMRG00000019874 #16	PIP4K2C (ENSPMRG00000019865) #17	KIF5A (ENSPMRG00000018753) #19	DCTN2 (ENSPMRG00000018524) #20	ENSPMRG00000018509 #21	DDIT3 (ENSPMRG00000018502) #22	MARS1 (ENSPMRG00000018468) #23	ARHGAP9 (ENSPMRG00000018426) #24	GLI1 (ENSPMRG00000010260) #25	INHBC (ENSPMRG00000010255) #27	ENSPMRG00000010254	R3HDM2 (ENSPMRG00000010247) #30	STAC3 (ENSPMRG00000010241) #31	NDUFA4L2 (ENSPMRG00000010235) #32	SHMT2 (ENSPMRG00000010228) #33	ENSPMRG00000010224	NXPH4 (ENSPMRG00000010221) #34	LRP1 (ENSPMRG00000008253) #35	STAT6 (ENSPMRG00000007908) #37	NAB2 (ENSPMRG00000007895)	NEMP1 (ENSPMRG00000007823)
Toxicofera	ANCESTRAL SPECIES	19	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000160422 #15	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000155890.l	ENSGT00940000158675
Lizard	MODERN SPECIES	826						ENSACAG00000000291 #14	ARHGEF25 (ENSACAG00000007181) #15	DTX3 (ENSACAG00000011025) #16	ENSACAG00000039337	PIP4K2C (ENSACAG00000007136) #17	KIF5A (ENSACAG00000006813) #19	ENSACAG00000039250	DCTN2 (ENSACAG00000006740) #20	MBD6 (ENSACAG00000024798) #21	ENSACAG00000036472	DDIT3 (ENSACAG00000006736) #22	MARS1 (ENSACAG00000006698) #23	ARHGAP9 (ENSACAG00000006584) #24	ENSACAG00000038579	GLI1 (ENSACAG00000006541) #25	INHBC (ENSACAG00000035671) #27	R3HDM2 (ENSACAG00000006388) #30	ENSACAG00000039797	STAC3 (ENSACAG00000006361) #31	NDUFA4L2 (ENSACAG00000040137) #32	SHMT2 (ENSACAG00000006283) #33	NXPH4 (ENSACAG00000006270) #34	ENSACAG00000035163	ENSACAG00000035440	ENSACAG00000042554 #35	ENSACAG00000005966 #35
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000155890.l	ENSGT00940000158675	ENSGT00940000161535.e
Elapidae_a	ANCESTRAL SPECIES	52	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000155224	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000155890.l	ENSGT00940000158675	ENSGT00940000161535.f
Acanthophiinae	ANCESTRAL SPECIES	52	ENSGT00390000008783	ENSGT00940000159366	ENSGT00940000155440.d	ENSGT00940000155489.b	ENSGT00940000164002.g	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000154766.a.b	ENSGT00940000161404 #16	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00980000200282	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000155890.l	ENSGT00940000158675	ENSGT00940000161535.f
Eastern brown snake	MODERN SPECIES	63	ASB8 (ENSPTXG00000010718)	PFKM (ENSPTXG00000010719)	SENP1 (ENSPTXG00000010720)	ENSPTXG00000010721	OS9 (ENSPTXG00000010722) #11	B4GALNT1 (ENSPTXG00000008991) #12	ENSPTXG00000008994 #14	ENSPTXG00000008996	ARHGEF25 (ENSPTXG00000008999) #15	DTX3 (ENSPTXG00000009002) #16	PIP4K2C (ENSPTXG00000009003) #17	KIF5A (ENSPTXG00000009008) #19	ENSPTXG00000009013	DCTN2 (ENSPTXG00000009015) #20	MBD6 (ENSPTXG00000009017) #21	DDIT3 (ENSPTXG00000009018) #22	MARS1 (ENSPTXG00000009019) #23	ARHGAP9 (ENSPTXG00000009030) #24	GLI1 (ENSPTXG00000009060) #25	INHBC (ENSPTXG00000009062) #27	R3HDM2 (ENSPTXG00000009064) #30	STAC3 (ENSPTXG00000009067) #31	ENSPTXG00000009070	SHMT2 (ENSPTXG00000009071) #33	NXPH4 (ENSPTXG00000009073) #34	LRP1 (ENSPTXG00000009077) #35	STAT6 (ENSPTXG00000009079) #37	NAB2 (ENSPTXG00000009080)	NEMP1 (ENSPTXG00000009081)	ENSPTXG00000009082	SPRYD3 (ENSPTXG00000009083)
Mainland tiger snake	MODERN SPECIES	57	ASB8 (ENSNSUG00000007095)	PFKM (ENSNSUG00000007094)	ENSNSUG00000007093	SENP1 (ENSNSUG00000007092)	ENSNSUG00000007091	ENSNSUG00000007089	OS9 (ENSNSUG00000007088) #11	B4GALNT1 (ENSNSUG00000007087) #12	ENSNSUG00000007086 #14	ENSNSUG00000007085	ENSNSUG00000007084	DTX3 (ENSNSUG00000007083) #16	PIP4K2C (ENSNSUG00000007082) #17	KIF5A (ENSNSUG00000007076) #19	DCTN2 (ENSNSUG00000007073) #20	DDIT3 (ENSNSUG00000007070) #22	MARS1 (ENSNSUG00000006234) #23	ENSNSUG00000006230 #24	GLI1 (ENSNSUG00000006220) #25	INHBC (ENSNSUG00000006217) #27	R3HDM2 (ENSNSUG00000005716) #30	STAC3 (ENSNSUG00000005713) #31	SHMT2 (ENSNSUG00000005712) #33	NXPH4 (ENSNSUG00000005711) #34	LRP1 (ENSNSUG00000001536) #35	STAT6 (ENSNSUG00000001503) #37	NAB2 (ENSNSUG00000001451)	NEMP1 (ENSNSUG00000001427)	SPRYD3 (ENSNSUG00000001424)	TNS2 (ENSNSUG00000001280)	EIF4B (ENSNSUG00000001274)
Blue-lipped sea krait	MODERN SPECIES	9183														DCTN2 (ENSLLTG00000013791) #20	MBD6 (ENSLLTG00000013797) #21	DDIT3 (ENSLLTG00000013804) #22	MARS1 (ENSLLTG00000013837) #23
Indian cobra	MODERN SPECIES	1	ASB8 (ENSNNAG00000014114)	PFKM (ENSNNAG00000014133)	SENP1 (ENSNNAG00000014251)	ENSNNAG00000014309	OS9 (ENSNNAG00000014355) #11	B4GALNT1 (ENSNNAG00000014413) #12	ENSNNAG00000014465 #14	ENSNNAG00000014505	ENSNNAG00000014520	DTX3 (ENSNNAG00000014602) #16	ENSNNAG00000014643	PIP4K2C (ENSNNAG00000014676) #17	KIF5A (ENSNNAG00000014877) #19	ENSNNAG00000015035	DCTN2 (ENSNNAG00000015047) #20	DDIT3 (ENSNNAG00000015147) #22	MARS1 (ENSNNAG00000015237) #23	ENSNNAG00000016089	ARHGAP9 (ENSNNAG00000016105) #24	GLI1 (ENSNNAG00000016236) #25	INHBC (ENSNNAG00000016266) #27	R3HDM2 (ENSNNAG00000016281) #30	STAC3 (ENSNNAG00000016307) #31	SHMT2 (ENSNNAG00000016328) #33	NXPH4 (ENSNNAG00000016339) #34	LRP1 (ENSNNAG00000016352) #35	ENSNNAG00000016461	NAB2 (ENSNNAG00000016470)	NEMP1 (ENSNNAG00000016499)	ENSNNAG00000016636	SPRYD3 (ENSNNAG00000016642)
tuatara	MODERN SPECIES	614							B4GALNT1 (ENSSPUG00000008071) #12	ENSSPUG00000008061 #14	ENSSPUG00000008055	ARHGEF25 (ENSSPUG00000008043) #15	DTX3 (ENSSPUG00000008028) #16	PIP4K2C (ENSSPUG00000008017) #17	KIF5A (ENSSPUG00000007870) #19	DCTN2 (ENSSPUG00000007835) #20	MBD6 (ENSSPUG00000007819) #21	DDIT3 (ENSSPUG00000007816) #22	MARS1 (ENSSPUG00000007756) #23	ARHGAP9 (ENSSPUG00000007724) #24	GLI1 (ENSSPUG00000007709) #25	INHBC (ENSSPUG00000007704) #27
Anura	ANCESTRAL SPECIES	3	ENSGT00940000154770 #8	ENSGT00940000160351 #9	ENSGT00530000063825.B	ENSGT00940000158956 #10	ENSGT00940000164002.f	ENSGT00940000164002.e	ENSGT00530000063603.A #11	ENSGT00390000006679.a #12	ENSGT01070000253775.a.d.b #14	ENSGT00940000166618	ENSGT00940000160422 #15	ENSGT00940000156890.a.a #17	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609 #30	ENSGT00950000183092.a #31	ENSGT01040000244455	ENSGT00390000002762.a.a #33	ENSGT00940000157899.b #35	ENSGT01080000257420.C.b.a #37	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000160660	ENSGT00390000000335
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000000824	ENSLLEG00000000808	ENSLLEG00000000797	ENSLLEG00000000776	OS9 (ENSLLEG00000000664) #11	B4GALNT1 (ENSLLEG00000000616) #12	ENSLLEG00000000477 #14	ENSLLEG00000017372	ENSLLEG00000017166	ARHGEF25 (ENSLLEG00000016837) #15	ENSLLEG00000016785	PIP4K2C (ENSLLEG00000015925) #17	KIF5A (ENSLLEG00000014569) #19	DCTN2 (ENSLLEG00000013757) #20	MBD6 (ENSLLEG00000013605) #21	DDIT3 (ENSLLEG00000013510) #22	MARS1 (ENSLLEG00000012759) #23	ARHGAP9 (ENSLLEG00000012249) #24	ENSLLEG00000012141	ENSLLEG00000012119	GLI1 (ENSLLEG00000012049) #25	ENSLLEG00000012031	ENSLLEG00000012007 #27	INHBC (ENSLLEG00000011984) #27	R3HDM2 (ENSLLEG00000011575) #30	STAC3 (ENSLLEG00000011368) #31	ENSLLEG00000011288	ENSLLEG00000011269	ENSLLEG00000011244	SHMT2 (ENSLLEG00000010660) #33	ENSLLEG00000010594
Frog	MODERN SPECIES	2	ENSXETG00000041435	agap2 (ENSXETG00000009661) #10	ENSXETG00000009666	ENSXETG00000038388	XB5871033 [provisional:c1galt1] (ENSXETG00000025171)	os9 (ENSXETG00000006216) #11	b4galnt1 (ENSXETG00000006222) #12	slc26a10 (ENSXETG00000006224) #14	sp5l (ENSXETG00000006226)	arhgef25 (ENSXETG00000036584)	dtx3 (ENSXETG00000011080) #16	pip4k2c (ENSXETG00000006229) #17	kif5a (ENSXETG00000006230) #19	dctn2 (ENSXETG00000006234) #20	mbd6 (ENSXETG00000006239) #21	ddit3 (ENSXETG00000006245) #22	mars1 (ENSXETG00000025174) #23	arhgap9 (ENSXETG00000017143) #24	ENSXETG00000041579	ENSXETG00000042678	gli1 (ENSXETG00000036606) #25	inhbc.1 (ENSXETG00000017149) #27	inhbc.2 (ENSXETG00000038306) #27	r3hdm2 (ENSXETG00000017153) #30	stac3 (ENSXETG00000017156) #31	ENSXETG00000048848	ENSXETG00000042180	shmt2 (ENSXETG00000017162) #33	lrp1 (ENSXETG00000010934) #35	stat6 (ENSXETG00000004431) #37	nab2 (ENSXETG00000004428)
Coelacanth	MODERN SPECIES	224	COQ10A (ENSLACG00000018966)	ANKRD52 (ENSLACG00000018963)	RAB5B (ENSLACG00000018961)	CDK2 (ENSLACG00000018959)	PMEL (ENSLACG00000018957)	BIN2 (ENSLACG00000018956)	CELA1 (ENSLACG00000018953)	ENSLACG00000018947	GALNT6 (ENSLACG00000018944)	SLC4A8 (ENSLACG00000018933)	FIGNL2 (ENSLACG00000018930)	SCN8A (ENSLACG00000018890)	METTL7A (ENSLACG00000018882)	ENSLACG00000018868	ATF1 (ENSLACG00000018861)	DDIT3 (ENSLACG00000018860) #22	MARS1 (ENSLACG00000018854) #23	ARHGAP9 (ENSLACG00000018841) #24	ENSLACG00000018829	NAB2 (ENSLACG00000018800)	NEMP1 (ENSLACG00000022538)	ENSLACG00000018787	ZBTB39 (ENSLACG00000018773)	GPR182 (ENSLACG00000018771)	gpr182 (ENSLACG00000018770)	RDH16 (ENSLACG00000018767)	gdf11 (ENSLACG00000018739)	SARNP (ENSLACG00000018719)	ORMDL2 (ENSLACG00000018715)	DNAJC14 (ENSLACG00000018708)	INPP1 (ENSLACG00000018703)
Actinopterygii	ANCESTRAL SPECIES	247												ENSGT01080000258228	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT00940000155460	ENSGT00940000155250
Neopterygii	ANCESTRAL SPECIES	117	ENSGT00390000010265	ENSGT00940000159006	ENSGT00940000154129	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000161293	ENSGT00940000155850	ENSGT00940000157748	ENSGT00940000160763	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439 #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a #31	ENSGT00940000161040 #32	ENSGT00390000002762.a.a #33	ENSGT00950000182883.b.a.b #34	ENSGT00940000157899.b #35	ENSGT00940000155460	ENSGT01090000260051.b.a.a.a	ENSGT00940000155250	ENSGT00940000155489.b
Osteoglossocephalai	ANCESTRAL SPECIES	1	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00990000209831	ENSGT01060000252161	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000171242	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Clupeocephala	ANCESTRAL SPECIES	7	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00950000183208.B.f.a	ENSGT00950000182860.a.a.b.a.b ##24	ENSGT00940000154801	ENSGT00940000155003.e.a	ENSGT01090000259987.a.b.c	ENSGT01030000234815	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Otomorpha	ANCESTRAL SPECIES	89	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT01060000252161	ENSGT00940000160885	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.c #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Clupeiformes	ANCESTRAL SPECIES	72	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.c #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Denticle herring	MODERN SPECIES	3	col2a1b (ENSDCDG00000031553)	myg1 (ENSDCDG00000032705)	MAP3K12 (ENSDCDG00000032712)	PCBP2 (ENSDCDG00000032895)	AMHR2 (ENSDCDG00000032912)	sp1 (ENSDCDG00000032919)	ENSDCDG00000032921	tarbp2 (ENSDCDG00000032927)	sp7 (ENSDCDG00000032929)	igsf8 (ENSDCDG00000032932)	soat2 (ENSDCDG00000032935)	KIF5A (ENSDCDG00000032977) #19	ENSDCDG00000034007	dctn2 (ENSDCDG00000034020) #20	ENSDCDG00000034072 #21	ddit3 (ENSDCDG00000034074) #22	mars1 (ENSDCDG00000034102) #23	ARHGAP9 (ENSDCDG00000034201) #24	ENSDCDG00000034204	ENSDCDG00000034205	gli1 (ENSDCDG00000034209) #25	INHBC (ENSDCDG00000034210) #27	R3HDM2 (ENSDCDG00000034227) #30	STAC3 (ENSDCDG00000034285) #31	NXPH4 (ENSDCDG00000034291) #34	shmt2 (ENSDCDG00000034339) #33	NDUFA4L2 (ENSDCDG00000034749) #32	fam210b (ENSDCDG00000034750)	PPP1R16B (ENSDCDG00000034751)	ARHGAP40 (ENSDCDG00000034753)	slc32a1 (ENSDCDG00000034755)
Atlantic herring	MODERN SPECIES	21	BRK1 (ENSCHAG00000022547)	isy1 (ENSCHAG00000022451)	zgc:77375 (ENSCHAG00000022429)	rab43 (ENSCHAG00000022422)	nuf2 (ENSCHAG00000022403)	ENSCHAG00000022356	LRP1 (ENSCHAG00000021367) ##35	tarbp2 (ENSCHAG00000021309)	sp7 (ENSCHAG00000021305)	igsf8 (ENSCHAG00000021302)	soat2 (ENSCHAG00000021074)	ENSCHAG00000021053	KIF5A (ENSCHAG00000017864) #19	dctn2 (ENSCHAG00000017516) #20	ENSCHAG00000017499 #21	ddit3 (ENSCHAG00000017490) #22	mars1 (ENSCHAG00000014303) #23	ARHGAP9 (ENSCHAG00000014062) #24	ENSCHAG00000014050	gli1 (ENSCHAG00000014040) #25	INHBC (ENSCHAG00000014032) #27	R3HDM2 (ENSCHAG00000012793) #30	STAC3 (ENSCHAG00000012579) #31	shmt2 (ENSCHAG00000010569) #33	ENSCHAG00000010521 #32	fam210b (ENSCHAG00000010506)	PPP1R16B (ENSCHAG00000010420)	ARHGAP40 (ENSCHAG00000010341)	slc32a1 (ENSCHAG00000010318)	aurka (ENSCHAG00000009943)	prelid3b (ENSCHAG00000009883)
Otophysi	ANCESTRAL SPECIES	15	ENSGT00950000183176.a	ENSGT00940000163999.a.q.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764.g	ENSGT00700000104550.a.j.b	ENSGT00940000160093.a	ENSGT00940000156407	ENSGT01030000234597.a.b.b.f	ENSGT00940000160694.g.a	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.c #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Characiphysae	ANCESTRAL SPECIES	2	ENSGT00950000183176.a	ENSGT00940000163999.a.q.a	ENSGT00950000182863.A.a.b	ENSGT00940000158764.g	ENSGT00700000104550.a.j.b	ENSGT00940000160093.a	ENSGT00940000156407	ENSGT01030000234597.a.b.b.f	ENSGT00940000160694.g.a	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.c #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00510000048007
Channel catfish	MODERN SPECIES	2	NECAB3 (ENSIPUG00000024550)	CBFA2T2 (ENSIPUG00000024542)	SNTA1 (ENSIPUG00000024538)	tox2 (ENSIPUG00000024534)	ralgapb (ENSIPUG00000024505)	kcnq2 (ENSIPUG00000024496)	arfrp1 (ENSIPUG00000024487)	STMN3 (ENSIPUG00000024484)	sp7 (ENSIPUG00000024425)	igsf8 (ENSIPUG00000024424)	soat2 (ENSIPUG00000024423)	ENSIPUG00000024422	kif5a (ENSIPUG00000024421) #19	dctn2 (ENSIPUG00000024417) #20	mbd6 (ENSIPUG00000024415) #21	ddit3 (ENSIPUG00000024414) #22	mars1 (ENSIPUG00000024413) #23	mars1 (ENSIPUG00000024410) #23	arhgap9 (ENSIPUG00000024409) #24	ENSIPUG00000024408	gli1 (ENSIPUG00000023898) #25	INHBC (ENSIPUG00000023895) #27	r3hdm2 (ENSIPUG00000023873) #30	STAC3 (ENSIPUG00000023860) #31	nxph4 (ENSIPUG00000023858) #34	SHMT2 (ENSIPUG00000023855) #33	rbm19 (ENSIPUG00000023849)	EPHA2 (ENSIPUG00000023840)	h6pd (ENSIPUG00000023834)	cenps (ENSIPUG00000023822)	TARDBP (ENSIPUG00000023818)
Characiphysae_b	ANCESTRAL SPECIES		ENSGT00950000182863.A.a.b	ENSGT00940000158764.g	ENSGT00700000104550.a.j.b	ENSGT00940000160093.a	ENSGT00940000156407	ENSGT01030000234597.a.b.b.f	ENSGT00940000160694.g.a.a	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT01080000258228	ENSGT00940000154801.n.a	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.c #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00510000048007
Characoidei	ANCESTRAL SPECIES		ENSGT00950000182863.A.a.b	ENSGT00940000158764.g	ENSGT00700000104550.a.j.b	ENSGT00940000160093.a	ENSGT00940000156407	ENSGT01030000234597.a.b.b.f	ENSGT00940000160694.g.a.a	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT01080000258228	ENSGT01030000234812.b	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.c #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00840000129953	ENSGT00940000165103.b	ENSGT00530000063435.b	ENSGT00940000162218	ENSGT00510000048007
Red-bellied piranha	MODERN SPECIES	108	tox2 (ENSPNAG00000016289)	RALGAPB (ENSPNAG00000016572)	KCNQ2 (ENSPNAG00000016721)	arfrp1 (ENSPNAG00000003438)	STMN3 (ENSPNAG00000016784)	ENSPNAG00000016859	sp7 (ENSPNAG00000016870)	igsf8 (ENSPNAG00000016880)	soat2 (ENSPNAG00000016902)	ENSPNAG00000016915	ENSPNAG00000016933	KIF5A (ENSPNAG00000016976) #19	ENSPNAG00000016990	dctn2 (ENSPNAG00000017051) #20	ENSPNAG00000017128 #21	ddit3 (ENSPNAG00000017147) #22	mars1 (ENSPNAG00000017290) #23	ARHGAP9 (ENSPNAG00000017348) #24	ENSPNAG00000017366	gli1 (ENSPNAG00000017380) #25	INHBC (ENSPNAG00000017399) #27	R3HDM2 (ENSPNAG00000017473) #30	STAC3 (ENSPNAG00000017628) #31	NXPH4 (ENSPNAG00000017638) #34	shmt2 (ENSPNAG00000017698) #33	NDUFA4L2 (ENSPNAG00000017712) #32
Mexicana tetra	MODERN SPECIES	4	SNTA1 (ENSAMXG00000000933)	tox2 (ENSAMXG00000041393)	RALGAPB (ENSAMXG00000000938)	KCNQ2 (ENSAMXG00000034237)	arfrp1 (ENSAMXG00000042798)	STMN3 (ENSAMXG00000017478)	HELZ2 (ENSAMXG00000017465)	sp7 (ENSAMXG00000029881)	igsf8 (ENSAMXG00000033883)	soat2 (ENSAMXG00000042964)	KIF5A (ENSAMXG00000017425) #19	ENSAMXG00000034826	ENSAMXG00000041097	dctn2 (ENSAMXG00000017402) #20	ENSAMXG00000017377 #21	ddit3 (ENSAMXG00000037250) #22	mars1 (ENSAMXG00000017335) #23	ARHGAP9 (ENSAMXG00000038772) #24	ENSAMXG00000038043	gli1 (ENSAMXG00000041979) #25	INHBC (ENSAMXG00000043015) #27	R3HDM2 (ENSAMXG00000017180) #30	stac3 (ENSAMXG00000032605) #31	NXPH4 (ENSAMXG00000017162) #34	shmt2 (ENSAMXG00000036404) #33	NDUFA4L2 (ENSAMXG00000031579) #32	rbm19 (ENSAMXG00000017073)	epha2a (ENSAMXG00000017007)	H6PD (ENSAMXG00000016984)	ENSAMXG00000043029	tardbpb (ENSAMXG00000039549)
Electric eel	MODERN SPECIES	161					dennd5b (ENSEEEG00000022108)	pkp2 (ENSEEEG00000022106)	nudt4b (ENSEEEG00000022103)	dnajc2 (ENSEEEG00000022102)	pmpcb (ENSEEEG00000021722)	med21 (ENSEEEG00000021673)	TM7SF3 (ENSEEEG00000021670)	fgfr1op2 (ENSEEEG00000021667)	gas2l3 (ENSEEEG00000021663)	FAM20B (ENSEEEG00000021656)	ENSEEEG00000021652 #21	ddit3 (ENSEEEG00000021651) #22	mars1 (ENSEEEG00000021584) #23	ARHGAP9 (ENSEEEG00000021582) #24	gli1 (ENSEEEG00000021580) #25	INHBC (ENSEEEG00000021577) #27	R3HDM2 (ENSEEEG00000021560) #30	NXPH4 (ENSEEEG00000021554) #34	shmt2 (ENSEEEG00000021230) #33	ENSEEEG00000021201	rbm19 (ENSEEEG00000021194)	epha2a (ENSEEEG00000021190)	H6PD (ENSEEEG00000021187)	rbp7b (ENSEEEG00000021185)	ENSEEEG00000021184	cenps (ENSEEEG00000021182)	tardbpb (ENSEEEG00000021159)
Cyprinoidei	ANCESTRAL SPECIES	177							ENSGT00940000156407	ENSGT01030000234597.a.b.b.f	ENSGT00940000160694.g.a	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000154801.n.a	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00950000183208.B.e	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	9	ENSGT00950000183131.a.f	ENSGT00950000183176.a.c	ENSGT00940000163999.a.q.a.a.b	ENSGT00950000182863.A.a.b.e	ENSGT00940000158764.g.e.b	ENSGT00940000160093.a.c.a	ENSGT00940000156407.h	ENSGT01030000234597.a.b.b.f	ENSGT00940000160694.g.a.c.a	ENSGT00940000161293.b	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000154801.n.a	ENSGT00390000003427.c #20	ENSGT00530000064137.a.a.d #21	ENSGT00390000006305.k #22	ENSGT00550000075017.c #23	ENSGT00950000182860.a.b.a.a #24	ENSGT00940000168625.b	ENSGT00940000160235.b #25	ENSGT00390000003427.d #20	ENSGT00530000064137.a.a.c #21	ENSGT00390000006305.l #22	ENSGT00550000075017.d #23	ENSGT00950000182860.a.b.a.b #24	ENSGT00940000168625.a	ENSGT00940000160235.a #25	ENSGT00940000160065 #27	ENSGT00940000155609.k.c.a #30	ENSGT00940000154090.b.d
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	46	ENSCARG00000035851	RIMS4 (ENSCARG00000035795)	ENSCARG00000035779	ANGPT4 (ENSCARG00000035562)	rspo4 (ENSCARG00000035544)	TMEM74B (ENSCARG00000035539)	psmf1 (ENSCARG00000035507)	blcap (ENSCARG00000035501)	ripor3 (ENSCARG00000035478)	ENSCARG00000035261	rbl1 (ENSCARG00000033926)	ENSCARG00000033858	PTPRT (ENSCARG00000028242)	dctn2 (ENSCARG00000027638) #20	ENSCARG00000027599 #21	ddit3 (ENSCARG00000027574) #22	mars1 (ENSCARG00000026211) #23	ARHGAP9 (ENSCARG00000026101) #24	ENSCARG00000026078	gli1 (ENSCARG00000026038) #25	aamp (ENSCARG00000025535)	ENSCARG00000024930	ENSCARG00000024892	ENSCARG00000024886	kdm6al (ENSCARG00000013650)	FUNDC1 (ENSCARG00000013359)	ddx3xb (ENSCARG00000012380)	GPR34 (ENSCARG00000012346)	caskb (ENSCARG00000006361)	ENSCARG00000005985	ENSCARG00000005937
Goldfish	MODERN SPECIES	46	ENSCARG00000003132	tox2 (ENSCARG00000003149)	ENSCARG00000003176	RALGAPB (ENSCARG00000003202)	KCNQ2 (ENSCARG00000003265)	arfrp1 (ENSCARG00000003800)	STMN3 (ENSCARG00000003822)	ENSCARG00000003832	ENSCARG00000003906	ENSCARG00000004113	sp7 (ENSCARG00000004131)	igsf8 (ENSCARG00000004141)	ENSCARG00000004168	dctn2 (ENSCARG00000004281) #20	ENSCARG00000004499 #21	ddit3 (ENSCARG00000004512) #22	SLC2A1 (ENSCARG00000004570)	ENSCARG00000005002	shmt2 (ENSCARG00000005038) #33	fam210b (ENSCARG00000005368)	ENSCARG00000005377	ARHGAP40 (ENSCARG00000005406)	slc32a1 (ENSCARG00000005422)	aurka (ENSCARG00000005426)	prelid3b (ENSCARG00000005442)	pmepa1 (ENSCARG00000005475)	ENSCARG00000005504	GPR180 (ENSCARG00000005851)	ENSCARG00000005875	TGDS (ENSCARG00000005880)	ENSCARG00000005890
Cyprininae_a	ANCESTRAL SPECIES	578														ENSGT00390000003427.c #20	ENSGT00530000064137.a.a.d #21	ENSGT00390000006305.k #22	ENSGT00550000075017.c #23	ENSGT00950000182860.a.b.a.a #24	ENSGT00940000168625.b	ENSGT00940000160235.b #25	ENSGT00940000160065.a #27	ENSGT00940000155609.k.c.a #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a.f #33
Common carp reference	MODERN SPECIES	10	itcha (ENSCCRG00000053905)	NECAB3 (ENSCCRG00000013575)	cbfa2t2 (ENSCCRG00000013531)	ENSCCRG00000075134	SNTA1 (ENSCCRG00000080321)	tox2 (ENSCCRG00000068710)	ENSCCRG00000065476	ENSCCRG00000054670	ENSCCRG00000000298	ENSCCRG00000081112	ENSCCRG00000068371	sp7 (ENSCCRG00000009400)	ENSCCRG00000068201	dctn2 (ENSCCRG00000075980) #20	ENSCCRG00000041216 #21	ddit3 (ENSCCRG00000041750) #22	ENSCCRG00000016542	mars1 (ENSCCRG00000057358) #23	ARHGAP9 (ENSCCRG00000056214) #24	ENSCCRG00000072309	gli1 (ENSCCRG00000075525) #25	INHBC (ENSCCRG00000071251) #27	R3HDM2 (ENSCCRG00000067940) #30	ENSCCRG00000055406 #34	ENSCCRG00000068291 #33	ENSCCRG00000067141	ENSCCRG00000037790	slc32a1 (ENSCCRG00000065530)	aurka (ENSCCRG00000056698)	prelid3b (ENSCCRG00000074761)	pmepa1 (ENSCCRG00000060226)
Cyprininae	ANCESTRAL SPECIES	9	ENSGT01030000234597.a.b.b.f	ENSGT00940000160694.g.a.c.a	ENSGT00940000161293.b	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000154801.n.a	ENSGT00390000003427.c #20	ENSGT00530000064137.a.a.d #21	ENSGT00390000006305.k #22	ENSGT00550000075017.c #23	ENSGT00950000182860.a.b.a.a #24	ENSGT00940000168625.b	ENSGT00940000160235.b #25	ENSGT00390000003427.d #20	ENSGT00530000064137.a.a.c #21	ENSGT00390000006305.l #22	ENSGT00550000075017.d #23	ENSGT00950000182860.a.b.a.b #24	ENSGT00940000168625.a	ENSGT00940000160235.a #25	ENSGT00940000160065 #27	ENSGT00940000155609.k.c.a #30	ENSGT00940000154090.b.d
Goldfish	MODERN SPECIES	24	ENSCARG00000020928	SNTA1 (ENSCARG00000020840)	tox2 (ENSCARG00000020808)	RALGAPB (ENSCARG00000020509)	KCNQ2 (ENSCARG00000019147)	arfrp1 (ENSCARG00000019082)	STMN3 (ENSCARG00000019075)	ENSCARG00000019070	ENSCARG00000019063	ENSCARG00000019046	sp7 (ENSCARG00000019038)	igsf8 (ENSCARG00000019035)	soat2 (ENSCARG00000019007)	dctn2 (ENSCARG00000018917) #20	ENSCARG00000018906 #21	ddit3 (ENSCARG00000018899) #22	mars1 (ENSCARG00000017742) #23	ARHGAP9 (ENSCARG00000017610) #24	ENSCARG00000017588	gli1 (ENSCARG00000017568) #25	INHBC (ENSCARG00000017559) #27	R3HDM2 (ENSCARG00000015417) #30	ilrun (ENSCARG00000015346)	SPDEF (ENSCARG00000015339)	pacsin1b (ENSCARG00000015318)	RPS10 (ENSCARG00000015306) #28	nudt3b (ENSCARG00000015293)	hmga1b (ENSCARG00000015288)	tusc2a (ENSCARG00000015280)	HYAL2 (ENSCARG00000015275)	hyal1 (ENSCARG00000015271)
Cyprininae_a	ANCESTRAL SPECIES	135	ENSGT00950000182863.A.a.b.e	ENSGT00940000158764.g.e.b	ENSGT00940000163999.a.q.a.a.b	ENSGT00940000158764.g.e.a.b	ENSGT00700000104550.a.j.b.f	ENSGT00940000160093.a.c.a	ENSGT00940000156407.h	ENSGT01030000234597.a.b.b.f	ENSGT00940000160694.g.a.c.a	ENSGT00940000161293.b	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000154801.n.a	ENSGT00390000003427.d #20	ENSGT00530000064137.a.a.c #21	ENSGT00390000006305.l #22	ENSGT00550000075017.d #23	ENSGT00950000182860.a.b.a.b #24	ENSGT00940000168625.a	ENSGT00940000160235.a #25	ENSGT00940000160065.b #27
Common carp reference	MODERN SPECIES	16	itcha (ENSCCRG00000014923)	NECAB3 (ENSCCRG00000054016)	cbfa2t2 (ENSCCRG00000012347)	SNTA1 (ENSCCRG00000076916)	ENSCCRG00000054132	tox2 (ENSCCRG00000018061)	ENSCCRG00000015212	ENSCCRG00000075587	arfrp1 (ENSCCRG00000081525)	ENSCCRG00000075715	sp7 (ENSCCRG00000000263)	igsf8 (ENSCCRG00000009398)	soat2 (ENSCCRG00000041670)	ENSCCRG00000041739 #21	dctn2 (ENSCCRG00000041698) #20	ddit3 (ENSCCRG00000056475) #22	mars1 (ENSCCRG00000041762) #23	ARHGAP9 (ENSCCRG00000001377) #24	ENSCCRG00000081050	gli1 (ENSCCRG00000069930) #25	INHBC (ENSCCRG00000026052) #27	R3HDM2 (ENSCCRG00000071539) #30	ENSCCRG00000053109	fam210b (ENSCCRG00000077474)	NDUFA4L2 (ENSCCRG00000064863) #32	shmt2 (ENSCCRG00000082392) #33	NXPH4 (ENSCCRG00000065690) #34	ENSCCRG00000077630	ENSCCRG00000077024	ENSCCRG00000037771	slc32a1 (ENSCCRG00000057158)
Golden-line barbel	MODERN SPECIES	1070					RALGAPB (ENSSGRG00000020386)	KCNQ2 (ENSSGRG00000020347)	arfrp1 (ENSSGRG00000020311)	STMN3 (ENSSGRG00000020306)	ENSSGRG00000020299	sp7 (ENSSGRG00000020297)	igsf8 (ENSSGRG00000020296)	soat2 (ENSSGRG00000020292)	ENSSGRG00000020289	dctn2 (ENSSGRG00000019981) #20	ENSSGRG00000019972 #21	ddit3 (ENSSGRG00000019971) #22	ARHGAP9 (ENSSGRG00000019964) #24	gli1 (ENSSGRG00000019958) #25
Zebrafish	MODERN SPECIES	21	cbfa2t2 (ENSDARG00000074337)	SNTA1 (ENSDARG00000098420)	tox2 (ENSDARG00000100055)	RALGAPB (ENSDARG00000088899)	KCNQ2 (ENSDARG00000091130)	ENSDARG00000087071	arfrp1 (ENSDARG00000057857)	STMN3 (ENSDARG00000038465)	ENSDARG00000016527	sp7 (ENSDARG00000019516)	igsf8 (ENSDARG00000038467)	soat2 (ENSDARG00000059824)	ENSDARG00000059818	dctn2 (ENSDARG00000031388) #20	ENSDARG00000086980 #21	ddit3 (ENSDARG00000059836) #22	mars1 (ENSDARG00000034396) #23	ENSDARG00000013390 #24	shmt2 (ENSDARG00000104414) #33	ENSDARG00000087907 #32	fam210b (ENSDARG00000052638)	PPP1R16B (ENSDARG00000079860)	gli1 (ENSDARG00000101244) #25	ENSDARG00000100986 #27	R3HDM2 (ENSDARG00000102610) #30	caskb (ENSDARG00000100119)	ddx3xb (ENSDARG00000005774)	kdm6al (ENSDARG00000059794)	aamp (ENSDARG00000045019)	ENSDARG00000021882	nufip1 (ENSDARG00000101024)
Euteleosteomorpha	ANCESTRAL SPECIES	5	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Acanthomorphata	ANCESTRAL SPECIES	26	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Euacanthomorphacea	ANCESTRAL SPECIES	1	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Percomorphaceae	ANCESTRAL SPECIES	1	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Percomorphaceae_B	ANCESTRAL SPECIES	3	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Ovalentaria	ANCESTRAL SPECIES	2	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Atherinomorphae	ANCESTRAL SPECIES	2	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	2	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Aplocheiloidei	ANCESTRAL SPECIES	10	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Mangrove rivulus	MODERN SPECIES	11	nckap1l (ENSKMAG00000011611)	COL2A1 (ENSKMAG00000011742)	ENSKMAG00000011879	myg1 (ENSKMAG00000011915)	MAP3K12 (ENSKMAG00000011955)	PCBP2 (ENSKMAG00000012031)	sp1 (ENSKMAG00000012103)	ENSKMAG00000012119	tarbp2 (ENSKMAG00000012142)	sp7 (ENSKMAG00000012155)	igsf8 (ENSKMAG00000012166)	soat2 (ENSKMAG00000012185)	KIF5A (ENSKMAG00000012239) #19	dctn2 (ENSKMAG00000012341) #20	mars1 (ENSKMAG00000012408) #23	ddit3 (ENSKMAG00000012519) #22	ARHGAP9 (ENSKMAG00000012550) #24	ENSKMAG00000012606	gli1 (ENSKMAG00000012625) #25	INHBC (ENSKMAG00000012645) #27	R3HDM2 (ENSKMAG00000012695) #30	NXPH4 (ENSKMAG00000012792) #34	shmt2 (ENSKMAG00000012809) #33	NDUFA4L2 (ENSKMAG00000012841) #32	fam210b (ENSKMAG00000012861)	PPP1R16B (ENSKMAG00000012884)	ENSKMAG00000012927	slc32a1 (ENSKMAG00000012998)	aurka (ENSKMAG00000013017)	prelid3b (ENSKMAG00000013055)	ENSKMAG00000013126
Turquoise killifish	MODERN SPECIES	1619	nckap1l (ENSNFUG00015007752)	COL2A1 (ENSNFUG00015008689)	C11H12ORF10 (ENSNFUG00015016109)	MAP3K12 (ENSNFUG00015016127)	PCBP2 (ENSNFUG00015016205)	ENSNFUG00015016255	sp1 (ENSNFUG00015016270)	ENSNFUG00015016346	TARBP2 (ENSNFUG00015016352)	sp7 (ENSNFUG00015016370)	igsf8 (ENSNFUG00015016377)	soat2 (ENSNFUG00015016386)	KIF5A (ENSNFUG00015016451) #19	ENSNFUG00015017947	dctn2 (ENSNFUG00015017953) #20	DDIT3 (ENSNFUG00015017974) #22	mars1 (ENSNFUG00015018073) #23	CABZ01088365.1 (ENSNFUG00015020603) #24	ENSNFUG00015020621	ENSNFUG00015020623	gli1 (ENSNFUG00015020631) #25	INHBC (ENSNFUG00015020646) #27	ENSNFUG00015020650	R3HDM2 (ENSNFUG00015020683) #30	ENSNFUG00015021452	NXPH4 (ENSNFUG00015021455) #34	SHMT2 (ENSNFUG00015021511) #33	NDUFA4L2 (ENSNFUG00015022527) #32	FAM210B (ENSNFUG00015022530)	PPP1R16B (ENSNFUG00015022534)	ENSNFUG00015022535
Cyprinodontoidei	ANCESTRAL SPECIES	4	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Poeciliinae	ANCESTRAL SPECIES	4	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Poecilia	ANCESTRAL SPECIES	23	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Guppy	MODERN SPECIES	457	nckap1l (ENSPREG00000007472)	COL2A1 (ENSPREG00000007539)	ENSPREG00000007608	myg1 (ENSPREG00000007647)	MAP3K12 (ENSPREG00000007677)	PCBP2 (ENSPREG00000007742)	ENSPREG00000007784	sp1 (ENSPREG00000007799)	tarbp2 (ENSPREG00000007815)	sp7 (ENSPREG00000007827)	igsf8 (ENSPREG00000007839)	SOAT2 (ENSPREG00000007854)	KIF5A (ENSPREG00000007937) #19	dctn2 (ENSPREG00000008030) #20	mars1 (ENSPREG00000008123) #23	ddit3 (ENSPREG00000008197) #22	ARHGAP9 (ENSPREG00000008228) #24	ENSPREG00000008270	gli1 (ENSPREG00000008295) #25	INHBC (ENSPREG00000008347) #27	R3HDM2 (ENSPREG00000008424) #30	NXPH4 (ENSPREG00000008585) #34	shmt2 (ENSPREG00000008598) #33	NDUFA4L2 (ENSPREG00000008652) #32	fam210b (ENSPREG00000008662)	PPP1R16B (ENSPREG00000008673)	ARHGAP40 (ENSPREG00000008695)	slc32a1 (ENSPREG00000008781)	aurka (ENSPREG00000008806)	prelid3b (ENSPREG00000008857)	ENSPREG00000008878
NAME_6	ANCESTRAL SPECIES	7	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Sailfin molly	MODERN SPECIES	41		COL2A1 (ENSPLAG00000017341)	ENSPLAG00000017405	myg1 (ENSPLAG00000017427)	MAP3K12 (ENSPLAG00000000398)	PCBP2 (ENSPLAG00000017518)	ENSPLAG00000017529	sp1 (ENSPLAG00000017625)	ENSPLAG00000017648	tarbp2 (ENSPLAG00000017659)	sp7 (ENSPLAG00000017665)	igsf8 (ENSPLAG00000017676)	ENSPLAG00000017688	KIF5A (ENSPLAG00000017750) #19	dctn2 (ENSPLAG00000017803) #20	ddit3 (ENSPLAG00000017812) #22	mars1 (ENSPLAG00000017870) #23	ARHGAP9 (ENSPLAG00000017880) #24	gli1 (ENSPLAG00000017910) #25	INHBC (ENSPLAG00000017949) #27
Amazon molly	MODERN SPECIES	254	ENSPFOG00000008225	myg1 (ENSPFOG00000008202)	MAP3K12 (ENSPFOG00000008087)	PCBP2 (ENSPFOG00000008011)	ENSPFOG00000007805	ENSPFOG00000007801	ENSPFOG00000007792	sp1 (ENSPFOG00000007682)	ENSPFOG00000007616	tarbp2 (ENSPFOG00000007586)	sp7 (ENSPFOG00000007503)	igsf8 (ENSPFOG00000007483)	soat2 (ENSPFOG00000007442)	KIF5A (ENSPFOG00000007419) #19	dctn2 (ENSPFOG00000007143) #20	ddit3 (ENSPFOG00000007011) #22	mars1 (ENSPFOG00000006998) #23	ARHGAP9 (ENSPFOG00000006700) #24	ENSPFOG00000006375	gli1 (ENSPFOG00000006269) #25	INHBC (ENSPFOG00000006113) #27	R3HDM2 (ENSPFOG00000006077) #30	NXPH4 (ENSPFOG00000005433) #34	shmt2 (ENSPFOG00000005424) #33	NDUFA4L2 (ENSPFOG00000005259) #32	fam210b (ENSPFOG00000005251)	PPP1R16B (ENSPFOG00000005228)	ARHGAP40 (ENSPFOG00000005022)	slc32a1 (ENSPFOG00000004785)	aurka (ENSPFOG00000004761)	prelid3b (ENSPFOG00000004673)
Platyfish	MODERN SPECIES	12	nckap1l (ENSXMAG00000017687)	COL2A1 (ENSXMAG00000017719)	ENSXMAG00000017757	myg1 (ENSXMAG00000017759)	MAP3K12 (ENSXMAG00000017771)	PCBP2 (ENSXMAG00000023803)	ENSXMAG00000017826	sp1 (ENSXMAG00000017829)	ENSXMAG00000028667	tarbp2 (ENSXMAG00000017836)	sp7 (ENSXMAG00000017840)	igsf8 (ENSXMAG00000017842)	soat2 (ENSXMAG00000017849)	KIF5A (ENSXMAG00000017874) #19	dctn2 (ENSXMAG00000017906) #20	ddit3 (ENSXMAG00000017918) #22	mars1 (ENSXMAG00000017920) #23	ARHGAP9 (ENSXMAG00000017939) #24	ENSXMAG00000017955	gli1 (ENSXMAG00000026676) #25	INHBC (ENSXMAG00000023740) #27	R3HDM2 (ENSXMAG00000017978) #30	NXPH4 (ENSXMAG00000006151) #34	shmt2 (ENSXMAG00000006123) #33	ENSXMAG00000021132	NDUFA4L2 (ENSXMAG00000023926) #32	fam210b (ENSXMAG00000006119)	PPP1R16B (ENSXMAG00000006109)	ENSXMAG00000027745	ENSXMAG00000022069	ENSXMAG00000006086
NAME_4	ANCESTRAL SPECIES	14	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Sheepshead minnow	MODERN SPECIES	146	nckap1l (ENSCVAG00000015442)	COL2A1 (ENSCVAG00000015242)	ENSCVAG00000010062	myg1 (ENSCVAG00000010043)	MAP3K12 (ENSCVAG00000010006)	PCBP2 (ENSCVAG00000009913)	ENSCVAG00000009873	sp1 (ENSCVAG00000009861)	ENSCVAG00000009843	tarbp2 (ENSCVAG00000009832)	sp7 (ENSCVAG00000009812)	igsf8 (ENSCVAG00000009801)	soat2 (ENSCVAG00000009750)	KIF5A (ENSCVAG00000009711) #19	dctn2 (ENSCVAG00000009660) #20	ddit3 (ENSCVAG00000009326) #22	mars1 (ENSCVAG00000009314) #23	ARHGAP9 (ENSCVAG00000009264) #24	ENSCVAG00000009111	gli1 (ENSCVAG00000009092) #25	INHBC (ENSCVAG00000009072) #27	R3HDM2 (ENSCVAG00000009058) #30	NXPH4 (ENSCVAG00000008977) #34	shmt2 (ENSCVAG00000008971) #33	NDUFA4L2 (ENSCVAG00000008937) #32	fam210b (ENSCVAG00000008921)	PPP1R16B (ENSCVAG00000008916)	ARHGAP40 (ENSCVAG00000008907)	slc32a1 (ENSCVAG00000008898)	aurka (ENSCVAG00000008888)	prelid3b (ENSCVAG00000008866)
Mummichog	MODERN SPECIES	2262	COL2A1 (ENSFHEG00000015893)	ENSFHEG00000015918	myg1 (ENSFHEG00000015924)	MAP3K12 (ENSFHEG00000015967)	PCBP2 (ENSFHEG00000016024)	ENSFHEG00000016043	sp1 (ENSFHEG00000016071)	ENSFHEG00000016108	tarbp2 (ENSFHEG00000016118)	sp7 (ENSFHEG00000016121)	igsf8 (ENSFHEG00000016131)	ENSFHEG00000016159	KIF5A (ENSFHEG00000016245) #19	ENSFHEG00000016257	dctn2 (ENSFHEG00000016325) #20	ddit3 (ENSFHEG00000016339) #22	mars1 (ENSFHEG00000016374) #23	ARHGAP9 (ENSFHEG00000016423) #24	ENSFHEG00000016429	gli1 (ENSFHEG00000016436) #25	INHBC (ENSFHEG00000016441) #27	R3HDM2 (ENSFHEG00000016484) #30	NXPH4 (ENSFHEG00000016500) #34
Oryzias	ANCESTRAL SPECIES	1	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Oryzias_b	ANCESTRAL SPECIES	3	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000155099.l	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000171242	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Indian medaka	MODERN SPECIES	8	nckap1l (ENSOMEG00000019423)	COL2A1 (ENSOMEG00000019204)	ENSOMEG00000019175	myg1 (ENSOMEG00000019142)	MAP3K12 (ENSOMEG00000019086)	PCBP2 (ENSOMEG00000019014)	ENSOMEG00000018945	ENSOMEG00000018896	ENSOMEG00000018881	tarbp2 (ENSOMEG00000018860)	sp7 (ENSOMEG00000018841)	igsf8 (ENSOMEG00000018831)	ENSOMEG00000018778	KIF5A (ENSOMEG00000018732) #19	dctn2 (ENSOMEG00000018587) #20	ddit3 (ENSOMEG00000018481) #22	mars1 (ENSOMEG00000018411) #23	ARHGAP9 (ENSOMEG00000018225) #24	gli1 (ENSOMEG00000018121) #25	INHBC (ENSOMEG00000018092) #27	R3HDM2 (ENSOMEG00000018079) #30	NXPH4 (ENSOMEG00000018036) #34	shmt2 (ENSOMEG00000000462) #33	ENSOMEG00000018002	FAM210B (ENSOMEG00000017983)	PPP1R16B (ENSOMEG00000017968)	ENSOMEG00000017918	slc32a1 (ENSOMEG00000017815)	aurka (ENSOMEG00000017803)	prelid3b (ENSOMEG00000017775)	ENSOMEG00000017730
Javanese ricefish	MODERN SPECIES	19	nckap1l (ENSOJAG00000008812)	COL2A1 (ENSOJAG00000003297)	ENSOJAG00000002749	myg1 (ENSOJAG00000002733)	MAP3K12 (ENSOJAG00000001982)	PCBP2 (ENSOJAG00000001741)	ENSOJAG00000001708	ENSOJAG00000001678	ENSOJAG00000001656	TARBP2 (ENSOJAG00000001633)	sp7 (ENSOJAG00000001621)	igsf8 (ENSOJAG00000001608)	soat2 (ENSOJAG00000001582)	KIF5A (ENSOJAG00000001014) #19	dctn2 (ENSOJAG00000000710) #20	ddit3 (ENSOJAG00000000630) #22	mars1 (ENSOJAG00000000451) #23	ARHGAP9 (ENSOJAG00000000275) #24	ENSOJAG00000000180	gli1 (ENSOJAG00000000155) #25	INHBC (ENSOJAG00000000096) #27	R3HDM2 (ENSOJAG00000020705) #30	NXPH4 (ENSOJAG00000020641) #34	shmt2 (ENSOJAG00000019956) #33	ENSOJAG00000019865	FAM210B (ENSOJAG00000019863)	PPP1R16B (ENSOJAG00000019824)	ENSOJAG00000019799	slc32a1 (ENSOJAG00000019780)	aurka (ENSOJAG00000019766)	prelid3b (ENSOJAG00000019748)
Oryzias_a	ANCESTRAL SPECIES	5	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Japanese Medaka HdrR	MODERN SPECIES	19	nckap1l (ENSORLG00000005002)	col2a1b (ENSORLG00000005102)	ENSORLG00000005112	myg1 (ENSORLG00000005118)	MAP3K12 (ENSORLG00000005144)	PCBP2 (ENSORLG00000005176)	ENSORLG00000029598	sp1 (ENSORLG00000005195)	ENSORLG00000005202	TARBP2 (ENSORLG00000005209)	sp7 (ENSORLG00000005215)	igsf8 (ENSORLG00000005224)	soat2 (ENSORLG00000005226)	KIF5A (ENSORLG00000005301) #19	dctn2 (ENSORLG00000005353) #20	ddit3 (ENSORLG00000022325) #22	mars1 (ENSORLG00000005405) #23	ARHGAP9 (ENSORLG00000005431) #24	ENSORLG00000024860	gli1 (ENSORLG00000005455) #25	INHBC (ENSORLG00000005461) #27	R3HDM2 (ENSORLG00000005502) #30	ENSORLG00000026255	NXPH4 (ENSORLG00000028376) #34	shmt2 (ENSORLG00000005536) #33	NDUFA4L2 (ENSORLG00000005542) #32	fam210b (ENSORLG00000026881)	ENSORLG00000026622	PPP1R16B (ENSORLG00000005566)	ENSORLG00000005618	slc32a1 (ENSORLG00000005623)
Chinese medaka	MODERN SPECIES	1091	nckap1l (ENSOSIG00000023647)	ENSOSIG00000023417	ENSOSIG00000023237	myg1 (ENSOSIG00000023235)	MAP3K12 (ENSOSIG00000023220)	PCBP2 (ENSOSIG00000023210)	ENSOSIG00000023197	ENSOSIG00000023195	ENSOSIG00000023190	tarbp2 (ENSOSIG00000023188)	sp7 (ENSOSIG00000023183)	igsf8 (ENSOSIG00000023179)	soat2 (ENSOSIG00000023178)	KIF5A (ENSOSIG00000023147) #19	dctn2 (ENSOSIG00000023070) #20	ddit3 (ENSOSIG00000023066) #22	mars1 (ENSOSIG00000022843) #23	ARHGAP9 (ENSOSIG00000022778) #24	ENSOSIG00000022767	gli1 (ENSOSIG00000022766) #25	INHBC (ENSOSIG00000022764) #27	R3HDM2 (ENSOSIG00000022556) #30	NXPH4 (ENSOSIG00000022484) #34	shmt2 (ENSOSIG00000021631) #33	fam210b (ENSOSIG00000021541)	PPP1R16B (ENSOSIG00000021537)	ENSOSIG00000021534	slc32a1 (ENSOSIG00000021532)	aurka (ENSOSIG00000021531)	prelid3b (ENSOSIG00000021527)	ENSOSIG00000021523
Ovalentaria_B	ANCESTRAL SPECIES	5	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Cichlidae	ANCESTRAL SPECIES	1	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00730000112701	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Pseudocrenilabrinae	ANCESTRAL SPECIES	4	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00940000178807	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a.a.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	2	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00940000178807	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a.a.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Haplochromini	ANCESTRAL SPECIES	1	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265.f	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00390000002762.a.a.b.a.a.b #33	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00940000178807	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a.a.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Burton s mouthbrooder	MODERN SPECIES	379															dctn2 (ENSHBUG00000009631) #20	ddit3 (ENSHBUG00000009592) #22	mars1 (ENSHBUG00000009575) #23	ARHGAP9 (ENSHBUG00000009337) #24	ENSHBUG00000009297	gli1 (ENSHBUG00000009262) #25	INHBC (ENSHBUG00000009251) #27	R3HDM2 (ENSHBUG00000009227) #30	NXPH4 (ENSHBUG00000009189) #34	shmt2 (ENSHBUG00000009182) #33	ENSHBUG00000009127 #32	fam210b (ENSHBUG00000009104)	PPP1R16B (ENSHBUG00000009098)	ENSHBUG00000009062	slc32a1 (ENSHBUG00000009015)	aurka (ENSHBUG00000008994)	GNAS (ENSHBUG00000008915)
Haplochromini_A	ANCESTRAL SPECIES		ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265.f	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00390000002762.a.a.b.a.a.b #33	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00940000178807	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a.a.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
P. nyererei	MODERN SPECIES	391	nckap1l (ENSPNYG00000014540)	COL2A1 (ENSPNYG00000014391)	ENSPNYG00000014314	myg1 (ENSPNYG00000014288)	MAP3K12 (ENSPNYG00000014244)	PCBP2 (ENSPNYG00000014206)	shmt2 (ENSPNYG00000014175) #33	sp1 (ENSPNYG00000014149)	ENSPNYG00000014134	tarbp2 (ENSPNYG00000014125)	sp7 (ENSPNYG00000014107)	igsf8 (ENSPNYG00000014093)	soat2 (ENSPNYG00000014076)	KIF5A (ENSPNYG00000014033) #19	dctn2 (ENSPNYG00000013974) #20	ddit3 (ENSPNYG00000013950) #22	mars1 (ENSPNYG00000013809) #23	ARHGAP9 (ENSPNYG00000013692) #24	ENSPNYG00000013672	gli1 (ENSPNYG00000013573) #25	INHBC (ENSPNYG00000013538) #27	R3HDM2 (ENSPNYG00000013479) #30	ENSPNYG00000013442	NXPH4 (ENSPNYG00000013423) #34	shmt2 (ENSPNYG00000013372) #33	NDUFA4L2 (ENSPNYG00000013325) #32	fam210b (ENSPNYG00000013310)	PPP1R16B (ENSPNYG00000013296)	ENSPNYG00000013267	slc32a1 (ENSPNYG00000013253)	GNAS (ENSPNYG00000013223)
Haplochromini_B	ANCESTRAL SPECIES		ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265.f	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00390000002762.a.a.b.a.a.b #33	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00940000178807	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a.a.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Eastern happy	MODERN SPECIES	17	col2a1b (ENSACLG00000017863)	ENSACLG00000018035	myg1 (ENSACLG00000018086)	MAP3K12 (ENSACLG00000018145)	PCBP2 (ENSACLG00000018264)	ENSACLG00000018364	shmt2 (ENSACLG00000018445) #33	sp1 (ENSACLG00000018496)	ENSACLG00000018522	tarbp2 (ENSACLG00000018569)	sp7 (ENSACLG00000018596)	igsf8 (ENSACLG00000018604)	soat2 (ENSACLG00000018633)	KIF5A (ENSACLG00000018664) #19	dctn2 (ENSACLG00000018818) #20	ddit3 (ENSACLG00000018924) #22	mars1 (ENSACLG00000018937) #23	ARHGAP9 (ENSACLG00000018988) #24	ENSACLG00000019042	gli1 (ENSACLG00000019087) #25	INHBC (ENSACLG00000019096) #27	R3HDM2 (ENSACLG00000019106) #30	ENSACLG00000019220	NXPH4 (ENSACLG00000019253) #34	shmt2 (ENSACLG00000019281) #33	NDUFA4L2 (ENSACLG00000019341) #32	fam210b (ENSACLG00000019366)	PPP1R16B (ENSACLG00000019384)	ENSACLG00000019415	slc32a1 (ENSACLG00000019578)	ENSACLG00000019588
Zebra mbuna	MODERN SPECIES	1108	COL2A1 (ENSMZEG00005006568)	ENSMZEG00005006602	myg1 (ENSMZEG00005006620)	MAP3K12 (ENSMZEG00005006642)	PCBP2 (ENSMZEG00005006692)	ENSMZEG00005006741	shmt2 (ENSMZEG00005006767) #33	sp1 (ENSMZEG00005006811)	ENSMZEG00005006827	tarbp2 (ENSMZEG00005006895)	sp7 (ENSMZEG00005006905)	igsf8 (ENSMZEG00005006915)	soat2 (ENSMZEG00005006932)	KIF5A (ENSMZEG00005006980) #19	dctn2 (ENSMZEG00005007037) #20	ddit3 (ENSMZEG00005007209) #22	mars1 (ENSMZEG00005007092) #23	ARHGAP9 (ENSMZEG00005007227) #24	ENSMZEG00005007280	gli1 (ENSMZEG00005007288) #25	INHBC (ENSMZEG00005007306) #27	R3HDM2 (ENSMZEG00005007319) #30	ENSMZEG00005007404	ENSMZEG00005007423	rbl1 (ENSMZEG00005007436)	ENSMZEG00005007487	ENSMZEG00005007513	dnase1l4.2 (ENSMZEG00005007550)	ENSMZEG00005007603	ENSMZEG00005007623	ENSMZEG00005007661
Lyretail cichlid	MODERN SPECIES	294	ENSNBRG00000003420	ITGA7 (ENSNBRG00000003457)	ENSNBRG00000003547	PPP1R1A (ENSNBRG00000003576)	ENSNBRG00000003611	nckap1l (ENSNBRG00000003664)	myg1 (ENSNBRG00000003755)	MAP3K12 (ENSNBRG00000003808)	PCBP2 (ENSNBRG00000003872)	SHMT2 (ENSNBRG00000003922) #33	sp1 (ENSNBRG00000003939)	tarbp2 (ENSNBRG00000003967)	sp7 (ENSNBRG00000003986)	KIF5A (ENSNBRG00000004010) #19	dctn2 (ENSNBRG00000004049) #20	ddit3 (ENSNBRG00000004088) #22	mars1 (ENSNBRG00000004105) #23	ARHGAP9 (ENSNBRG00000004187) #24	gli1 (ENSNBRG00000004411) #25	INHBC (ENSNBRG00000004464) #27	R3HDM2 (ENSNBRG00000004483) #30	ENSNBRG00000004544	shmt2 (ENSNBRG00000004585) #33	ENSNBRG00000004627 #32	fam210b (ENSNBRG00000004682)	PPP1R16B (ENSNBRG00000004695)	ENSNBRG00000004745	slc32a1 (ENSNBRG00000004780)	aurka (ENSNBRG00000004811)	prelid3b (ENSNBRG00000005002)	ENSNBRG00000005022
Nile tilapia	MODERN SPECIES	17	COL2A1 (ENSONIG00000005146)	ENSONIG00000021382	myg1 (ENSONIG00000005142)	MAP3K12 (ENSONIG00000005141)	PCBP2 (ENSONIG00000005135)	ENSONIG00000005133	shmt2 (ENSONIG00000005123) #33	sp1 (ENSONIG00000005121)	ENSONIG00000039640	tarbp2 (ENSONIG00000005115)	sp7 (ENSONIG00000041473)	igsf8 (ENSONIG00000005111)	soat2 (ENSONIG00000005106)	KIF5A (ENSONIG00000005097) #19	dctn2 (ENSONIG00000005094) #20	ddit3 (ENSONIG00000041620) #22	mars1 (ENSONIG00000005090) #23	ARHGAP9 (ENSONIG00000005088) #24	ENSONIG00000005086	gli1 (ENSONIG00000005084) #25	INHBC (ENSONIG00000043033) #27	R3HDM2 (ENSONIG00000005075) #30	ENSONIG00000039606	NXPH4 (ENSONIG00000038466) #34	shmt2 (ENSONIG00000005066) #33	NDUFA4L2 (ENSONIG00000042525) #32	fam210b (ENSONIG00000039924)	PPP1R16B (ENSONIG00000029036)	ENSONIG00000011482	slc32a1 (ENSONIG00000035212)	aurka (ENSONIG00000011487)
Midas cichlid	MODERN SPECIES	423	nckap1l (ENSACIG00000017988)	col2a1b (ENSACIG00000017092)	ENSACIG00000016980	myg1 (ENSACIG00000016964)	MAP3K12 (ENSACIG00000016919)	PCBP2 (ENSACIG00000016893)	ENSACIG00000016879	sp1 (ENSACIG00000016867)	ENSACIG00000016857	tarbp2 (ENSACIG00000016780)	sp7 (ENSACIG00000016758)	igsf8 (ENSACIG00000016688)	soat2 (ENSACIG00000016667)	KIF5A (ENSACIG00000016616) #19	dctn2 (ENSACIG00000016582) #20	ddit3 (ENSACIG00000016572) #22	mars1 (ENSACIG00000016271) #23	ARHGAP9 (ENSACIG00000016223) #24	gli1 (ENSACIG00000016199) #25	INHBC (ENSACIG00000016187) #27	R3HDM2 (ENSACIG00000016146) #30	STAC3 (ENSACIG00000016114) #31	NXPH4 (ENSACIG00000016102) #34	shmt2 (ENSACIG00000016081) #33	NDUFA4L2 (ENSACIG00000016061) #32	ENSACIG00000016040 #33	fam210b (ENSACIG00000016035)	PPP1R16B (ENSACIG00000015994)	ENSACIG00000015967	slc32a1 (ENSACIG00000015957)	aurka (ENSACIG00000015943)
Pomacentridae	ANCESTRAL SPECIES	3	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Pomacentridae_A	ANCESTRAL SPECIES	38	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Amphiprion	ANCESTRAL SPECIES	57	ENSGT00390000016619.b	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Clown anemonefish	MODERN SPECIES	1610														KIF5A (ENSAOCG00000002285) #19	dctn2 (ENSAOCG00000011467) #20	ddit3 (ENSAOCG00000011382) #22	mars1 (ENSAOCG00000011411) #23	ARHGAP9 (ENSAOCG00000011361) #24	gli1 (ENSAOCG00000011303) #25	epha4a (ENSAOCG00000011254)
Orange clownfish	MODERN SPECIES	20	nckap1l (ENSAPEG00000006073)	COL2A1 (ENSAPEG00000006442)	myg1 (ENSAPEG00000008109)	ENSAPEG00000008136	MAP3K12 (ENSAPEG00000008165)	PCBP2 (ENSAPEG00000008226)	ENSAPEG00000008281	sp1 (ENSAPEG00000008325)	ENSAPEG00000008368	tarbp2 (ENSAPEG00000008376)	sp7 (ENSAPEG00000008382)	igsf8 (ENSAPEG00000008392)	soat2 (ENSAPEG00000008415)	KIF5A (ENSAPEG00000008450) #19	dctn2 (ENSAPEG00000008529) #20	ddit3 (ENSAPEG00000008725) #22	mars1 (ENSAPEG00000008610) #23	ARHGAP9 (ENSAPEG00000008745) #24	gli1 (ENSAPEG00000008774) #25	INHBC (ENSAPEG00000008825) #27	R3HDM2 (ENSAPEG00000008851) #30	STAC3 (ENSAPEG00000009012) #31	NXPH4 (ENSAPEG00000009115) #34	shmt2 (ENSAPEG00000009123) #33	NDUFA4L2 (ENSAPEG00000009178) #32	fam210b (ENSAPEG00000009193)	PPP1R16B (ENSAPEG00000009200)	atp2b4 (ENSAPEG00000009252)	ENSAPEG00000009319	slc32a1 (ENSAPEG00000009374)	aurka (ENSAPEG00000009393)
Spiny chromis	MODERN SPECIES	2	nckap1l (ENSAPOG00000000521)	ENSAPOG00000019577	ENSAPOG00000019635	myg1 (ENSAPOG00000019681)	MAP3K12 (ENSAPOG00000019737)	PCBP2 (ENSAPOG00000019824)	ENSAPOG00000019841	sp1 (ENSAPOG00000019854)	ENSAPOG00000019871	tarbp2 (ENSAPOG00000019892)	sp7 (ENSAPOG00000019907)	igsf8 (ENSAPOG00000019915)	soat2 (ENSAPOG00000019929)	KIF5A (ENSAPOG00000000570) #19	dctn2 (ENSAPOG00000020120) #20	ddit3 (ENSAPOG00000000573) #22	mars1 (ENSAPOG00000020238) #23	ARHGAP9 (ENSAPOG00000020261) #24	ENSAPOG00000020264	gli1 (ENSAPOG00000020275) #25	INHBC (ENSAPOG00000020292) #27	R3HDM2 (ENSAPOG00000020341) #30	STAC3 (ENSAPOG00000020406) #31	NXPH4 (ENSAPOG00000020416) #34	shmt2 (ENSAPOG00000020482) #33	NDUFA4L2 (ENSAPOG00000020508) #32	ENSAPOG00000020522	ENSAPOG00000020559	PPP1R16B (ENSAPOG00000020597)	ENSAPOG00000020607	slc32a1 (ENSAPOG00000020624)
Bicolor damselfish	MODERN SPECIES	444	col2a1b (ENSSPAG00000022876)	ENSSPAG00000022869	myg1 (ENSSPAG00000022861)	MAP3K12 (ENSSPAG00000022850)	PCBP2 (ENSSPAG00000022833)	sp1 (ENSSPAG00000022826)	ENSSPAG00000022815	tarbp2 (ENSSPAG00000022797)	sp7 (ENSSPAG00000022795)	igsf8 (ENSSPAG00000022792)	ENSSPAG00000022788	ENSSPAG00000022784	ENSSPAG00000022781	KIF5A (ENSSPAG00000022770) #19	dctn2 (ENSSPAG00000022735) #20	ddit3 (ENSSPAG00000022721) #22	mars1 (ENSSPAG00000022691) #23	ARHGAP9 (ENSSPAG00000022667) #24	ENSSPAG00000022652	gli1 (ENSSPAG00000022634) #25	INHBC (ENSSPAG00000022630) #27	R3HDM2 (ENSSPAG00000022594) #30	STAC3 (ENSSPAG00000022569) #31
Percomorphaceae_C	ANCESTRAL SPECIES	1	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Eupercaria	ANCESTRAL SPECIES		ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Tetraodontidae	ANCESTRAL SPECIES	1	ENSGT00390000010923	ENSGT00940000160402	ENSGT00950000182848.c.b.a.b	ENSGT00940000159376	ENSGT00940000155154.b	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00940000156862.y	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a
Fugu	MODERN SPECIES	10	rtf2 (ENSTRUG00000013750)	tfap2c (ENSTRUG00000013876)	CDH22 (ENSTRUG00000013921)	ENSTRUG00000028589	ZNFX1 (ENSTRUG00000014181)	ENSTRUG00000014259	ENSTRUG00000023676	sp1 (ENSTRUG00000014305)	ENSTRUG00000028499	tarbp2 (ENSTRUG00000014379)	sp7 (ENSTRUG00000014417)	igsf8 (ENSTRUG00000014424)	soat2 (ENSTRUG00000014440)	KIF5A (ENSTRUG00000014533) #19	dctn2 (ENSTRUG00000014681) #20	ddit3 (ENSTRUG00000022142) #22	mars1 (ENSTRUG00000014774) #23	ARHGAP9 (ENSTRUG00000014850) #24	ENSTRUG00000020712	gli1 (ENSTRUG00000014998) #25	INHBC (ENSTRUG00000026328) #27	R3HDM2 (ENSTRUG00000015075) #30	STAC3 (ENSTRUG00000015182) #31	ENSTRUG00000033379	ENSTRUG00000030505	ENSTRUG00000032090	ENSTRUG00000027357	ENSTRUG00000027106	ENSTRUG00000031035	ENSTRUG00000032341	ENSTRUG00000026335
Eupecaria_A	ANCESTRAL SPECIES		ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Ballan wrasse	MODERN SPECIES	92	ENSLBEG00000015389	myg1 (ENSLBEG00000015364)	MAP3K12 (ENSLBEG00000015291)	PCBP2 (ENSLBEG00000015211)	ENSLBEG00000015173	AMHR2 (ENSLBEG00000015150)	ENSLBEG00000015137	sp1 (ENSLBEG00000015119)	ENSLBEG00000015088	tarbp2 (ENSLBEG00000015027)	sp7 (ENSLBEG00000014988)	igsf8 (ENSLBEG00000014964)	soat2 (ENSLBEG00000014908)	KIF5A (ENSLBEG00000014231) #19	dctn2 (ENSLBEG00000013783) #20	ddit3 (ENSLBEG00000013715) #22	mars1 (ENSLBEG00000013609) #23	ARHGAP9 (ENSLBEG00000013413) #24	ENSLBEG00000013336	gli1 (ENSLBEG00000013301) #25	INHBC (ENSLBEG00000013285) #27	R3HDM2 (ENSLBEG00000013115) #30	STAC3 (ENSLBEG00000013000) #31	NXPH4 (ENSLBEG00000012974) #34	shmt2 (ENSLBEG00000012928) #33	NDUFA4L2 (ENSLBEG00000012899) #32	fam210b (ENSLBEG00000012887)	PPP1R16B (ENSLBEG00000012858)	ENSLBEG00000012773	slc32a1 (ENSLBEG00000012739)	aurka (ENSLBEG00000012718)
Eupecaria_B	ANCESTRAL SPECIES	2	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Perciformes	ANCESTRAL SPECIES		ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Cottioidei	ANCESTRAL SPECIES		ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a	ENSGT00940000159809
Lumpfish	MODERN SPECIES	20	ENSCLMG00005006700	ENSCLMG00005008511	myg1 (ENSCLMG00005008513)	MAP3K12 (ENSCLMG00005008515)	PCBP2 (ENSCLMG00005008518)	AMHR2 (ENSCLMG00005008524)	ENSCLMG00005008526	sp1 (ENSCLMG00005008527)	ENSCLMG00005008530	tarbp2 (ENSCLMG00005008531)	sp7 (ENSCLMG00005008532)	igsf8 (ENSCLMG00005008533)	soat2 (ENSCLMG00005008534)	KIF5A (ENSCLMG00005008553) #19	dctn2 (ENSCLMG00005009100) #20	ddit3 (ENSCLMG00005009109) #22	mars1 (ENSCLMG00005009111) #23	ARHGAP9 (ENSCLMG00005009138) #24	gli1 (ENSCLMG00005009139) #25	INHBC (ENSCLMG00005009143) #27	R3HDM2 (ENSCLMG00005009172) #30	NXPH4 (ENSCLMG00005012302) #34	shmt2 (ENSCLMG00005012306) #33	NDUFA4L2 (ENSCLMG00005013179) #32	fam210b (ENSCLMG00005013181)	PPP1R16B (ENSCLMG00005013185)	ENSCLMG00005013189	slc32a1 (ENSCLMG00005013192)	aurka (ENSCLMG00005013193)	prelid3b (ENSCLMG00005013194)	ENSCLMG00005013212
Perciformes_a	ANCESTRAL SPECIES	5	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Channel bull blenny	MODERN SPECIES	19	col2a1b (ENSCGOG00000002057)	ENSCGOG00000002609	myg1 (ENSCGOG00000002653)	MAP3K12 (ENSCGOG00000003159)	PCBP2 (ENSCGOG00000003231)	AMHR2 (ENSCGOG00000003462)	ENSCGOG00000003470	sp1 (ENSCGOG00000003476)	ENSCGOG00000003488	tarbp2 (ENSCGOG00000003490)	sp7 (ENSCGOG00000003516)	igsf8 (ENSCGOG00000003517)	SOAT2 (ENSCGOG00000003521)	KIF5A (ENSCGOG00000003603) #19	dctn2 (ENSCGOG00000008000) #20	ddit3 (ENSCGOG00000010752) #22	mars1 (ENSCGOG00000008998) #23	ARHGAP9 (ENSCGOG00000010754) #24	ENSCGOG00000010767	gli1 (ENSCGOG00000010770) #25	INHBC (ENSCGOG00000010778) #27	R3HDM2 (ENSCGOG00000010804) #30	ENSCGOG00000012169	NXPH4 (ENSCGOG00000012188) #34	shmt2 (ENSCGOG00000012216) #33	NDUFA4L2 (ENSCGOG00000013093) #32	fam210b (ENSCGOG00000013094)	PPP1R16B (ENSCGOG00000013096)	ARHGAP40 (ENSCGOG00000013199)	slc32a1 (ENSCGOG00000013219)	aurka (ENSCGOG00000013220)
Pike perch	MODERN SPECIES	17	COL2A1 (ENSSLUG00000018543)	ENSSLUG00000018597	myg1 (ENSSLUG00000018603)	MAP3K12 (ENSSLUG00000018620)	PCBP2 (ENSSLUG00000018910)	ENSSLUG00000018933	ENSSLUG00000018949	sp1 (ENSSLUG00000018958)	ENSSLUG00000018967	tarbp2 (ENSSLUG00000018974)	sp7 (ENSSLUG00000018984)	igsf8 (ENSSLUG00000018986)	soat2 (ENSSLUG00000018992)	KIF5A (ENSSLUG00000019081) #19	dctn2 (ENSSLUG00000020568) #20	ddit3 (ENSSLUG00000020599) #22	mars1 (ENSSLUG00000020616) #23	ARHGAP9 (ENSSLUG00000020770) #24	ENSSLUG00000020773	gli1 (ENSSLUG00000020778) #25	INHBC (ENSSLUG00000020798) #27	R3HDM2 (ENSSLUG00000020831) #30	STAC3 (ENSSLUG00000021477) #31	NXPH4 (ENSSLUG00000021491) #34	shmt2 (ENSSLUG00000021526) #33	NDUFA4L2 (ENSSLUG00000022317) #32	fam210b (ENSSLUG00000022322)	PPP1R16B (ENSSLUG00000022333)	ENSSLUG00000022366	ENSSLUG00000022378	slc32a1 (ENSSLUG00000022388)
Eupecaria_C	ANCESTRAL SPECIES		ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000167008.b	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Eupercaria_incertae_sedis	ANCESTRAL SPECIES		ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000167008.b	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Large yellow croaker	MODERN SPECIES	478	COL2A1 (ENSLCRG00005014800)	ENSLCRG00005016935	myg1 (ENSLCRG00005016939)	MAP3K12 (ENSLCRG00005016991)	PCBP2 (ENSLCRG00005017322)	AMHR2 (ENSLCRG00005017338)	ENSLCRG00005017342	sp1 (ENSLCRG00005017344)	ENSLCRG00005017346	tarbp2 (ENSLCRG00005017354)	sp7 (ENSLCRG00005017355)	igsf8 (ENSLCRG00005017357)	soat2 (ENSLCRG00005017358)	KIF5A (ENSLCRG00005017381) #19	dctn2 (ENSLCRG00005018057) #20	ddit3 (ENSLCRG00005018077) #22	mars1 (ENSLCRG00005018229) #23	ARHGAP9 (ENSLCRG00005020314) #24	ENSLCRG00005020321	gli1 (ENSLCRG00005020328) #25	INHBC (ENSLCRG00005020329) #27	R3HDM2 (ENSLCRG00005020340) #30	STAC3 (ENSLCRG00005020432) #31	NXPH4 (ENSLCRG00005020437) #34	shmt2 (ENSLCRG00005020491) #33	NDUFA4L2 (ENSLCRG00005021136) #32	ENSLCRG00005021143	PPP1R16B (ENSLCRG00005021158)	ENSLCRG00005021174	ENSLCRG00005021179	ENSLCRG00005021187
European seabass	MODERN SPECIES	10	ENSDLAG00005011706	LRRC3 (ENSDLAG00005031801)	ENSDLAG00005011734	MAP3K12 (ENSDLAG00005011757)	PCBP2 (ENSDLAG00005012212)	AMHR2 (ENSDLAG00005012420)	ENSDLAG00005012532	SP1 (ENSDLAG00005028905)	ENSDLAG00005012558	ENSDLAG00005012584	ENSDLAG00005012618	igsf8 (ENSDLAG00005012622)	soat2 (ENSDLAG00005012634)	KIF5A (ENSDLAG00005012989) #19	dctn2 (ENSDLAG00005013696) #20	ddit3 (ENSDLAG00005013732) #22	mars1 (ENSDLAG00005004499) #23	ARHGAP9 (ENSDLAG00005006921) #24	ENSDLAG00005030897	gli1 (ENSDLAG00005007028) #25	INHBC (ENSDLAG00005007075) #27	R3HDM2 (ENSDLAG00005007143) #30	STAC3 (ENSDLAG00005034079) #31	NXPH4 (ENSDLAG00005008386) #34	ENSDLAG00005008419 #33	fam210b (ENSDLAG00005033260)	NDUFA4L2 (ENSDLAG00005026923) #32	ENSDLAG00005009500	ENSDLAG00005009549	slc32a1 (ENSDLAG00005009631)	STK6 (ENSDLAG00005009640)
Gilthead seabream	MODERN SPECIES	20	ENSSAUG00010024419	ENSSAUG00010024416	myg1 (ENSSAUG00010024414)	MAP3K12 (ENSSAUG00010024058)	PCBP2 (ENSSAUG00010024041)	AMHR2 (ENSSAUG00010024036)	ENSSAUG00010024034	sp1 (ENSSAUG00010024032)	ENSSAUG00010024028	tarbp2 (ENSSAUG00010024026)	sp7 (ENSSAUG00010024024)	igsf8 (ENSSAUG00010024022)	soat2 (ENSSAUG00010024021)	KIF5A (ENSSAUG00010024019) #19	dctn2 (ENSSAUG00010024017) #20	ddit3 (ENSSAUG00010024012) #22	mars1 (ENSSAUG00010023606) #23	ARHGAP9 (ENSSAUG00010023588) #24	ENSSAUG00010023585	gli1 (ENSSAUG00010023582) #25	INHBC (ENSSAUG00010023578) #27	R3HDM2 (ENSSAUG00010022718) #30	STAC3 (ENSSAUG00010022700) #31	NXPH4 (ENSSAUG00010022698) #34	shmt2 (ENSSAUG00010021330) #33	NDUFA4L2 (ENSSAUG00010021308) #32	fam210b (ENSSAUG00010021307)	PPP1R16B (ENSSAUG00010021293)	ENSSAUG00010021285	slc32a1 (ENSSAUG00010021281)	aurka (ENSSAUG00010021279)
Percomorphaceae_D	ANCESTRAL SPECIES	3	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Carangaria	ANCESTRAL SPECIES	3	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Carangaria_A	ANCESTRAL SPECIES	7	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Seriola	ANCESTRAL SPECIES	20	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Greater amberjack	MODERN SPECIES	53	ENSSDUG00000018583	myg1 (ENSSDUG00000018594)	MAP3K12 (ENSSDUG00000018605)	PCBP2 (ENSSDUG00000018636)	AMHR2 (ENSSDUG00000018694)	ENSSDUG00000018745	sp1 (ENSSDUG00000018762)	ENSSDUG00000018786	tarbp2 (ENSSDUG00000018818)	sp7 (ENSSDUG00000018832)	igsf8 (ENSSDUG00000018842)	ENSSDUG00000018863	KIF5A (ENSSDUG00000018901) #19	dctn2 (ENSSDUG00000019003) #20	mars1 (ENSSDUG00000019070) #23	ddit3 (ENSSDUG00000019137) #22	ARHGAP9 (ENSSDUG00000019146) #24	gli1 (ENSSDUG00000019214) #25	INHBC (ENSSDUG00000019254) #27	R3HDM2 (ENSSDUG00000019269) #30	STAC3 (ENSSDUG00000019405) #31	NXPH4 (ENSSDUG00000019467) #34	shmt2 (ENSSDUG00000019474) #33	NDUFA4L2 (ENSSDUG00000019505) #32	ENSSDUG00000019521	fam210b (ENSSDUG00000019531)	PPP1R16B (ENSSDUG00000019542)	ARHGAP40 (ENSSDUG00000019566)	slc32a1 (ENSSDUG00000019584)	aurka (ENSSDUG00000019595)	prelid3b (ENSSDUG00000019608)
Yellowtail amberjack	MODERN SPECIES	2901													soat2 (ENSSLDG00000005915)	KIF5A (ENSSLDG00000005746) #19	dctn2 (ENSSLDG00000005639) #20	ddit3 (ENSSLDG00000005612) #22	ENSSLDG00000005592	mars1 (ENSSLDG00000005561) #23	ARHGAP9 (ENSSLDG00000005502) #24	gli1 (ENSSLDG00000005440) #25	INHBC (ENSSLDG00000005417) #27	R3HDM2 (ENSSLDG00000005252) #30	STAC3 (ENSSLDG00000005137) #31	NXPH4 (ENSSLDG00000005108) #34	shmt2 (ENSSLDG00000005054) #33	NDUFA4L2 (ENSSLDG00000005033) #32	fam210b (ENSSLDG00000005015)
Barramundi perch	MODERN SPECIES	82	col2a1b (ENSLCAG00010017116)	ENSLCAG00010017048	myg1 (ENSLCAG00010017043)	MAP3K12 (ENSLCAG00010017038)	PCBP2 (ENSLCAG00010017031)	AMHR2 (ENSLCAG00010017023)	ENSLCAG00010017021	sp1 (ENSLCAG00010017020)	ENSLCAG00010017018	tarbp2 (ENSLCAG00010017013)	sp7 (ENSLCAG00010017011)	igsf8 (ENSLCAG00010017008)	soat2 (ENSLCAG00010017003)	KIF5A (ENSLCAG00010016992) #19	dctn2 (ENSLCAG00010016982) #20	ddit3 (ENSLCAG00010016980) #22	mars1 (ENSLCAG00010016732) #23	ARHGAP9 (ENSLCAG00010016637) #24	gli1 (ENSLCAG00010016615) #25	INHBC (ENSLCAG00010016607) #27	R3HDM2 (ENSLCAG00010016532) #30	STAC3 (ENSLCAG00010016509) #31	NXPH4 (ENSLCAG00010016507) #34	shmt2 (ENSLCAG00010016481) #33	NDUFA4L2 (ENSLCAG00010016471) #32	fam210b (ENSLCAG00010016467)	PNLIPRP2 (ENSLCAG00010016460)	hspa12a (ENSLCAG00010016449)	eno4 (ENSLCAG00010016441)	shtn1 (ENSLCAG00010016434)	atp6v1ba (ENSLCAG00010016252)
Pleuronectoidei	ANCESTRAL SPECIES	4	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293.f	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Turbot	MODERN SPECIES	18	ENSSMAG00000013013	ENSSMAG00000028488	MAP3K12 (ENSSMAG00000012938)	PCBP2 (ENSSMAG00000012889)	ENSSMAG00000012872	AMHR2 (ENSSMAG00000012859)	ENSSMAG00000012830	SP1 (ENSSMAG00000012813)	ENSSMAG00000027302	TARBP2 (ENSSMAG00000012769)	ENSSMAG00000022200	igsf8 (ENSSMAG00000012735)	soat2 (ENSSMAG00000012714)	KIF5A (ENSSMAG00000012588) #19	dctn2 (ENSSMAG00000012547) #20	ddit3 (ENSSMAG00000012530) #22	mars1 (ENSSMAG00000012409) #23	ARHGAP9 (ENSSMAG00000012272) #24	ENSSMAG00000028151	gli1 (ENSSMAG00000012216) #25	INHBC (ENSSMAG00000024860) #27	R3HDM2 (ENSSMAG00000012073) #30	STAC3 (ENSSMAG00000012053) #31	NXPH4 (ENSSMAG00000012048) #34	shmt2 (ENSSMAG00000012014) #33	NDUFA4L2 (ENSSMAG00000011983) #32	fam210b (ENSSMAG00000024290)	ENSSMAG00000011937	ENSSMAG00000011867	slc32a1 (ENSSMAG00000031105)	ENSSMAG00000011833
Tongue sole	MODERN SPECIES	2	ENSCSEG00000010494	myg1 (ENSCSEG00000010499)	MAP3K12 (ENSCSEG00000010511)	PCBP2 (ENSCSEG00000010540)	AMHR2 (ENSCSEG00000010574)	ENSCSEG00000010596	sp1 (ENSCSEG00000010606)	ENSCSEG00000010614	ENSCSEG00000010620	tarbp2 (ENSCSEG00000010631)	sp7 (ENSCSEG00000010658)	igsf8 (ENSCSEG00000010672)	soat2 (ENSCSEG00000010682)	KIF5A (ENSCSEG00000010724) #19	dctn2 (ENSCSEG00000010766) #20	ddit3 (ENSCSEG00000010799) #22	mars1 (ENSCSEG00000010816) #23	ARHGAP9 (ENSCSEG00000010868) #24	ENSCSEG00000010889	gli1 (ENSCSEG00000010901) #25	INHBC (ENSCSEG00000010908) #27	R3HDM2 (ENSCSEG00000010925) #30	STAC3 (ENSCSEG00000011014) #31	NXPH4 (ENSCSEG00000011029) #34	shmt2 (ENSCSEG00000011047) #33	hcfc1a (ENSCSEG00000011118)	opn1sw2 (ENSCSEG00000011138)	KCNK15 (ENSCSEG00000011149)	ubap2a (ENSCSEG00000011158)	dido1 (ENSCSEG00000011175)	gnl3l (ENSCSEG00000011209)
Anabantaria	ANCESTRAL SPECIES		ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00730000112701	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Anabantoidei	ANCESTRAL SPECIES	1	ENSGT00940000155224.c.a	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000161040.a #32	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
Climbing perch	MODERN SPECIES	18	ENSATEG00000025004	ENSATEG00000025005	MAP3K12 (ENSATEG00000025006)	PCBP2 (ENSATEG00000025007)	AMHR2 (ENSATEG00000025008)	ENSATEG00000025009	SP1 (ENSATEG00000025010)	ENSATEG00000026871	ENSATEG00000025012	ENSATEG00000025013	igsf8 (ENSATEG00000025014)	ENSATEG00000025015	ENSATEG00000025016 #19	dctn2 (ENSATEG00000025017) #20	mars1 (ENSATEG00000025019) #23	ddit3 (ENSATEG00000029330) #22	ARHGAP9 (ENSATEG00000025020) #24	ENSATEG00000025021	gli1 (ENSATEG00000025022) #25	INHBC (ENSATEG00000025023) #27	ENSATEG00000028260	R3HDM2 (ENSATEG00000025024) #30	STAC3 (ENSATEG00000025025) #31	NXPH4 (ENSATEG00000025026) #34	shmt2 (ENSATEG00000025027) #33	NDUFA4L2 (ENSATEG00000025028) #32	fam210b (ENSATEG00000025029)	ENSATEG00000025030	ENSATEG00000025032	slc32a1 (ENSATEG00000027089)	ENSATEG00000025034
Siamese fighting fish	MODERN SPECIES	16	ENSBSLG00000025073	myg1 (ENSBSLG00000025075)	MAP3K12 (ENSBSLG00000025077)	PCBP2 (ENSBSLG00000025109)	AMHR2 (ENSBSLG00000025116)	ENSBSLG00000025118	sp1 (ENSBSLG00000025123)	ENSBSLG00000025126	tarbp2 (ENSBSLG00000025129)	sp7 (ENSBSLG00000025133)	igsf8 (ENSBSLG00000025137)	soat2 (ENSBSLG00000025142)	KIF5A (ENSBSLG00000025185) #19	dctn2 (ENSBSLG00000025329) #20	mars1 (ENSBSLG00000025335) #23	ddit3 (ENSBSLG00000025349) #22	ARHGAP9 (ENSBSLG00000025351) #24	ENSBSLG00000025360	gli1 (ENSBSLG00000025362) #25	INHBC (ENSBSLG00000025366) #27	R3HDM2 (ENSBSLG00000025375) #30	STAC3 (ENSBSLG00000025514) #31	ENSBSLG00000025545	NXPH4 (ENSBSLG00000025548) #34	shmt2 (ENSBSLG00000025565) #33	NDUFA4L2 (ENSBSLG00000025694) #32	fam210b (ENSBSLG00000025702)	PPP1R16B (ENSBSLG00000025704)	ENSBSLG00000025708	ENSBSLG00000025710	slc32a1 (ENSBSLG00000025718)
Zig-zag eel	MODERN SPECIES	19	ENSMAMG00000010561	ENSMAMG00000010495	ENSMAMG00000010465	MAP3K12 (ENSMAMG00000010441)	PCBP2 (ENSMAMG00000010416)	ENSMAMG00000010397	AMHR2 (ENSMAMG00000010373)	SP1 (ENSMAMG00000010349)	ENSMAMG00000010311	ENSMAMG00000010272	ENSMAMG00000010257	igsf8 (ENSMAMG00000010247)	soat2 (ENSMAMG00000010240)	KIF5A (ENSMAMG00000010203) #19	dctn2 (ENSMAMG00000010138) #20	ddit3 (ENSMAMG00000028715) #22	mars1 (ENSMAMG00000010012) #23	ARHGAP9 (ENSMAMG00000009917) #24	ENSMAMG00000009904	gli1 (ENSMAMG00000009841) #25	INHBC (ENSMAMG00000009832) #27	R3HDM2 (ENSMAMG00000009793) #30	STAC3 (ENSMAMG00000009748) #31	NXPH4 (ENSMAMG00000009730) #34	shmt2 (ENSMAMG00000009686) #33	NDUFA4L2 (ENSMAMG00000009667) #32	fam210b (ENSMAMG00000028164)	ENSMAMG00000009581	ENSMAMG00000009558	slc32a1 (ENSMAMG00000009549)	ENSMAMG00000009517
Tiger tail seahorse	MODERN SPECIES	516	wnt2ba (ENSHCOG00000000973)	st7l (ENSHCOG00000000984)	tox2 (ENSHCOG00000000993)	SNTA1 (ENSHCOG00000001001)	ENSHCOG00000001005	cbfa2t2 (ENSHCOG00000001009)	ENSHCOG00000001013	sp1 (ENSHCOG00000001021)	ENSHCOG00000001023	tarbp2 (ENSHCOG00000001027)	sp7 (ENSHCOG00000001032)	igsf8 (ENSHCOG00000001034)	soat2 (ENSHCOG00000001042)	KIF5A (ENSHCOG00000001057) #19	dctn2 (ENSHCOG00000001072) #20	ddit3 (ENSHCOG00000001079) #22	mars1 (ENSHCOG00000001090) #23	ARHGAP9 (ENSHCOG00000001098) #24	ENSHCOG00000001104	gli1 (ENSHCOG00000001116) #25	INHBC (ENSHCOG00000001128) #27	R3HDM2 (ENSHCOG00000001142) #30	STAC3 (ENSHCOG00000001152) #31	NXPH4 (ENSHCOG00000001158) #34	shmt2 (ENSHCOG00000001169) #33	ENSHCOG00000001172	PPP1R16B (ENSHCOG00000001179)	ARHGAP40 (ENSHCOG00000001187)	slc32a1 (ENSHCOG00000001191)	slc32a1 (ENSHCOG00000001194)	aurka (ENSHCOG00000001197)
Pinecone sodierfish	MODERN SPECIES	19	myg1 (ENSMMDG00005004653)	MAP3K12 (ENSMMDG00005004658)	PCBP2 (ENSMMDG00005004677)	ENSMMDG00005004735	AMHR2 (ENSMMDG00005004781)	ENSMMDG00005004791	sp1 (ENSMMDG00005004796)	ENSMMDG00005004804	tarbp2 (ENSMMDG00005004811)	sp7 (ENSMMDG00005004865)	igsf8 (ENSMMDG00005004871)	SOAT2 (ENSMMDG00005004877)	KIF5A (ENSMMDG00005004924) #19	dctn2 (ENSMMDG00005005252) #20	mars1 (ENSMMDG00005005377) #23	ddit3 (ENSMMDG00005005924) #22	ARHGAP9 (ENSMMDG00005005932) #24	gli1 (ENSMMDG00005005946) #25	INHBC (ENSMMDG00005005954) #27	R3HDM2 (ENSMMDG00005005987) #30	STAC3 (ENSMMDG00005007779) #31	NXPH4 (ENSMMDG00005007781) #34	shmt2 (ENSMMDG00005007800) #33	NDUFA4L2 (ENSMMDG00005010642) #32	fam210b (ENSMMDG00005010644)	PPP1R16B (ENSMMDG00005010646)	ARHGAP40 (ENSMMDG00005010652)	slc32a1 (ENSMMDG00005010656)	aurka (ENSMMDG00005010658)	prelid3b (ENSMMDG00005010660)	TUBB1 (ENSMMDG00005010661)
Cod	MODERN SPECIES	4	ENSGMOG00000001436	ENSGMOG00000034719	ENSGMOG00000001407	MAP3K12 (ENSGMOG00000001355)	PCBP2 (ENSGMOG00000001342)	AMHR2 (ENSGMOG00000001327)	ENSGMOG00000001324	SP1 (ENSGMOG00000025110)	ENSGMOG00000001306	ENSGMOG00000001290	ENSGMOG00000022892	igsf8 (ENSGMOG00000032192)	soat2 (ENSGMOG00000001227)	KIF5A (ENSGMOG00000008007) #19	dctn2 (ENSGMOG00000007997) #20	ddit3 (ENSGMOG00000031028) #22	mars1 (ENSGMOG00000007987) #23	ARHGAP9 (ENSGMOG00000007982) #24	ENSGMOG00000036108	gli1 (ENSGMOG00000007975) #25	INHBC (ENSGMOG00000029392) #27	R3HDM2 (ENSGMOG00000007961) #30	STAC3 (ENSGMOG00000007958) #31	ENSGMOG00000025210 #34	NDUFA4L2 (ENSGMOG00000007946) #32	shmt2 (ENSGMOG00000007949) #33	fam210b (ENSGMOG00000007942)	ENSGMOG00000007929	ENSGMOG00000007921	slc32a1 (ENSGMOG00000035092)	ENSGMOG00000007912
Protacanthopterygii	ANCESTRAL SPECIES	98	ENSGT00940000154360.A.a	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd.a.a	ENSGT00970000198185	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00950000183208.A.d	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a	ENSGT00940000159809
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	202										ENSGT00940000159006.c.a.a	ENSGT00940000154129.gd.a.a	ENSGT00940000160763.g	ENSGT00940000161293.c	ENSGT00940000159439.b.a #19	ENSGT00390000003427.a.a #20	ENSGT00390000006305.m #22	ENSGT00950000182860.a.b.a.e #24	ENSGT00950000183208.A.d.a	ENSGT00940000160235.g.a #25	ENSGT00940000160065.g #27	ENSGT00940000155609.k.a.a #30	ENSGT00950000182883.b.a.b.a.g #34	ENSGT00390000002762.a.a.b.a.d #33	ENSGT00940000156134.p	ENSGT00940000154090.b.f.a	ENSGT00940000162174.d	ENSGT00490000043380.a.i	ENSGT00940000154417.d.g	ENSGT00390000004940.a.b.o.b	ENSGT01050000244971.A.d.a.a	ENSGT00390000000911.h.b.i
Salmoninae_a	ANCESTRAL SPECIES	25	ENSGT00940000161337.a.a.a.b	ENSGT00940000161337.a.a.b.b	ENSGT00940000160096	ENSGT00940000154984.B	ENSGT00940000165514.g	ENSGT00940000154697.a.b.xb	ENSGT01090000260040.b.a.b.z.b	ENSGT00940000158934	ENSGT00940000166055	ENSGT00940000159006.c.a.a	ENSGT00940000154129.gd.a.a	ENSGT00940000160763.g	ENSGT00940000161293.c	ENSGT00940000159439.b.a #19	ENSGT00390000003427.a.a #20	ENSGT00390000006305.m #22	ENSGT00950000182860.a.b.a.e #24	ENSGT00950000183208.A.d.a	ENSGT00940000160235.g.a #25	ENSGT00940000160065.g #27	ENSGT00940000155609.k.a.a #30	ENSGT00950000182883.b.a.b.a.g #34	ENSGT00390000002762.a.a.b.a.d #33	ENSGT00940000156134.p	ENSGT00940000154090.b.f.a	ENSGT00940000162174.d	ENSGT00490000043380.a.i	ENSGT00940000154417.d.g	ENSGT00390000004940.a.b.o.b	ENSGT01010000223025.b	ENSGT01050000244971.A.d.a.a
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT00940000161337.a.a.b.b	ENSGT00940000160096	ENSGT00940000154984.B	ENSGT00940000165514.g	ENSGT00940000154697.a.b.xb	ENSGT01090000260040.b.a.b.z.b	ENSGT00940000158934	ENSGT00940000166055	ENSGT00940000159006.c.a.a	ENSGT00940000154129.gd.a.a	ENSGT00940000157804.p	ENSGT00940000160763.g	ENSGT00940000161293.c	ENSGT00940000159439.b.a #19	ENSGT00390000003427.a.a #20	ENSGT00390000006305.m #22	ENSGT00950000182860.a.b.a.e #24	ENSGT00950000183208.A.d.a	ENSGT00940000160235.g.a #25	ENSGT00940000160065.g #27	ENSGT00940000155609.k.a.a #30	ENSGT00950000182883.b.a.b.a.g #34	ENSGT01010000229889	ENSGT00940000156134.p	ENSGT00940000154090.b.f.a	ENSGT00940000162174.d	ENSGT00490000043380.a.i	ENSGT00940000154417.d.g	ENSGT01010000223025.b	ENSGT00390000004940.a.b.o.b	ENSGT01050000244971.A.d.a.a.a
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000055286	ENSOMYG00000010471	ENSOMYG00000068533	ENSOMYG00000066236	ENSOMYG00000055788	ENSOMYG00000069204	ENSOMYG00000034159	ENSOMYG00000010474	ENSOMYG00000019672	ENSOMYG00000019703	ENSOMYG00000019713	ENSOMYG00000061411	KIF5A (ENSOMYG00000019804) #19	ENSOMYG00000020033	dctn2 (ENSOMYG00000020113) #20	ddit3 (ENSOMYG00000066053) #22	ARHGAP9 (ENSOMYG00000021030) #24	ENSOMYG00000021038	ENSOMYG00000021048	gli1 (ENSOMYG00000021075) #25	INHBC (ENSOMYG00000021098) #27	R3HDM2 (ENSOMYG00000021429) #30	ENSOMYG00000051093	ENSOMYG00000022797 #34	ENSOMYG00000022828	ENSOMYG00000022867	ENSOMYG00000022989	ENSOMYG00000023176	ENSOMYG00000023234	ENSOMYG00000069626	ddx19b (ENSOMYG00000023284)
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00940000161337.a.a.b.b	ENSGT00940000160096	ENSGT00940000154984.B	ENSGT00940000165514.g	ENSGT00940000154697.a.b.xb	ENSGT01090000260040.b.a.b.z.b	ENSGT00940000158934	ENSGT00940000166055	ENSGT00940000159006.c.a.a	ENSGT00940000154129.gd.a.a	ENSGT00940000157804.p	ENSGT00940000160763.g	ENSGT00940000161293.c	ENSGT00940000159439.b.a #19	ENSGT00390000003427.a.a #20	ENSGT00390000006305.m #22	ENSGT00950000182860.a.b.a.e #24	ENSGT00950000183208.A.d.a	ENSGT00940000160235.g.a #25	ENSGT00940000160065.g #27	ENSGT00940000155609.k.a.a #30	ENSGT00950000182883.b.a.b.a.g #34	ENSGT01010000229889	ENSGT00940000156134.p	ENSGT00940000154090.b.f.a	ENSGT00940000162174.d	ENSGT00490000043380.a.i	ENSGT00940000154417.d.g	ENSGT01010000223025.b	ENSGT00390000004940.a.b.o.b	ENSGT01050000244971.A.d.a.a.a
Chinook salmon	MODERN SPECIES	31	or90a1 (ENSOTSG00005026286)	ENSOTSG00005026289	KCNS1 (ENSOTSG00005026293)	ENSOTSG00005026299	cox6c (ENSOTSG00005028340)	tomm34 (ENSOTSG00005028341)	YWHAB (ENSOTSG00005028342)	RIMS4 (ENSOTSG00005028344)	ENSOTSG00005028345	MAP3K12 (ENSOTSG00005028346)	PCBP2 (ENSOTSG00005028349)	ENSOTSG00005028350	sp7 (ENSOTSG00005028351)	KIF5A (ENSOTSG00005028355) #19	dctn2 (ENSOTSG00005028365) #20	ddit3 (ENSOTSG00005028420) #22	ARHGAP9 (ENSOTSG00005028424) #24	ENSOTSG00005028513	gli1 (ENSOTSG00005028515) #25	INHBC (ENSOTSG00005028520) #27	R3HDM2 (ENSOTSG00005028531) #30	NXPH4 (ENSOTSG00005029437) #34	ENSOTSG00005029440	PPP1R16B (ENSOTSG00005029443)	ARHGAP40 (ENSOTSG00005029456)	slc32a1 (ENSOTSG00005029457)	ddx19b (ENSOTSG00005029464)	ENSOTSG00005029522	camk2n1 (ENSOTSG00005029524)	ENSOTSG00005029525	cdab (ENSOTSG00005029527)
Coho salmon	MODERN SPECIES	25	KCNS1 (ENSOKIG00005028501)	ENSOKIG00005028590	cox6c (ENSOKIG00005029702)	tomm34 (ENSOKIG00005029718)	YWHAB (ENSOKIG00005029741)	RIMS4 (ENSOKIG00005029828)	ENSOKIG00005029851	MAP3K12 (ENSOKIG00005029888)	PCBP2 (ENSOKIG00005030528)	ENSOKIG00005030565	ENSOKIG00005030583	SP7 (ENSOKIG00005030626)	KIF5A (ENSOKIG00005030690) #19	ENSOKIG00005031017	dctn2 (ENSOKIG00005031094) #20	ddit3 (ENSOKIG00005031895) #22	ARHGAP9 (ENSOKIG00005031927) #24	ENSOKIG00005032066	gli1 (ENSOKIG00005032090) #25	INHBC (ENSOKIG00005032179) #27	R3HDM2 (ENSOKIG00005032208) #30	ENSOKIG00005000010	NXPH4 (ENSOKIG00005000023) #34	ENSOKIG00005000043	ENSOKIG00005000056	PPP1R16B (ENSOKIG00005000113)	ENSOKIG00005000159	SLC32A1 (ENSOKIG00005000179)	ddx19b (ENSOKIG00005000187)	ENSOKIG00005000200	ENSOKIG00005000205
Salmo	ANCESTRAL SPECIES	6	ENSGT00940000161337.a.a.a.a	ENSGT00940000161337.a.a.b.b	ENSGT00940000160096	ENSGT00940000154984.B	ENSGT00940000165514.g	ENSGT00940000154697.a.b.xb	ENSGT01090000260040.b.a.b.z.b	ENSGT00940000158934	ENSGT00940000166055	ENSGT00940000159006.c.a.a	ENSGT00940000154129.gd.a.a	ENSGT00940000160763.g	ENSGT00940000161293.c	ENSGT00940000159439.b.a #19	ENSGT00390000003427.a.a #20	ENSGT00390000006305.m #22	ENSGT00950000182860.a.b.a.e #24	ENSGT00950000183208.A.d.a	ENSGT00940000160235.g.a #25	ENSGT00940000160065.g #27	ENSGT00940000155609.k.a.a #30	ENSGT00950000182883.b.a.b.a.g #34	ENSGT00390000002762.a.a.b.a.d #33	ENSGT00940000156134.p	ENSGT00940000154090.b.f.a	ENSGT00940000162174.d	ENSGT00490000043380.a.i	ENSGT00940000154417.d.g	ENSGT00390000004940.a.b.o.b	ENSGT01010000223025.b	ENSGT01050000244971.A.d.a.a
River trout	MODERN SPECIES	7	ENSSTUG00000034498	KCNS1 (ENSSTUG00000034455)	ENSSTUG00000033646	cox6c (ENSSTUG00000033586)	tomm34 (ENSSTUG00000033567)	YWHAB (ENSSTUG00000033516)	RIMS4 (ENSSTUG00000033491)	ENSSTUG00000033463	MAP3K12 (ENSSTUG00000032545)	PCBP2 (ENSSTUG00000032405)	ENSSTUG00000032374	sp7 (ENSSTUG00000032370)	ENSSTUG00000032354	KIF5A (ENSSTUG00000030857) #19	dctn2 (ENSSTUG00000030644) #20	ddit3 (ENSSTUG00000030619) #22	ARHGAP9 (ENSSTUG00000030522) #24	ENSSTUG00000030511	gli1 (ENSSTUG00000030470) #25	INHBC (ENSSTUG00000030462) #27	R3HDM2 (ENSSTUG00000029974) #30	NXPH4 (ENSSTUG00000030818) #34	ENSSTUG00000030803	ENSSTUG00000030798	PPP1R16B (ENSSTUG00000030736)	ENSSTUG00000030723	slc32a1 (ENSSTUG00000030703)	ENSSTUG00000030692	ddx19b (ENSSTUG00000030430)	camk2n1 (ENSSTUG00000030424)	ENSSTUG00000030414
Atlantic salmon	MODERN SPECIES	14	ENSSSAG00000088918	or90a1 (ENSSSAG00000050578)	KCNS1 (ENSSSAG00000050596)	stk4 (ENSSSAG00000050672)	cox6c (ENSSSAG00000050777)	tomm34 (ENSSSAG00000050785)	ENSSSAG00000050790	ENSSSAG00000089084	ENSSSAG00000050804	ENSSSAG00000050832	ENSSSAG00000053031	ENSSSAG00000053096	ENSSSAG00000053099	KIF5A (ENSSSAG00000053327) #19	DCTN2 (ENSSSAG00000063429) #20	ddit3 (ENSSSAG00000103408) #22	ENSSSAG00000093872	ENSSSAG00000122184	ENSSSAG00000109066	RHG15 (ENSSSAG00000064319) #24	ENSSSAG00000064348	gli1 (ENSSSAG00000064356) #25	INHBC (ENSSSAG00000090732) #27	R3HDM2 (ENSSSAG00000064420) #30	ENSSSAG00000082070 #34	shmt2 (ENSSSAG00000066094) #33	fam210b (ENSSSAG00000066096)	ppp1r16b (ENSSSAG00000066102)	ENSSSAG00000094656	ENSSSAG00000066689	ENSSSAG00000100803
Huchen	MODERN SPECIES	855								pmepa1 (ENSHHUG00000052581)	MAP3K12 (ENSHHUG00000052582)	ENSHHUG00000052585	ENSHHUG00000052589	ENSHHUG00000052590	sp7 (ENSHHUG00000052591)	KIF5A (ENSHHUG00000052592) #19	dctn2 (ENSHHUG00000052593) #20	ddit3 (ENSHHUG00000052645) #22	ENSHHUG00000052651	ENSHHUG00000000032 #24
Salmoninae	ANCESTRAL SPECIES	101	ENSGT00390000010265.c.b	ENSGT00940000159006.c.a.b	ENSGT00940000154129.gd.b	ENSGT00970000198185	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763.h	ENSGT00940000157748	ENSGT00940000161293.d	ENSGT00940000161314	ENSGT00990000205462.b	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b.b #19	ENSGT00390000003427.a.b #20	ENSGT00390000006305.n #22	ENSGT00550000075017.e.a #23	ENSGT00550000075017.f #23	ENSGT00950000182860.a.b.a.f #24	ENSGT00950000183208.A.d.b	ENSGT00940000160235.g.b #25	ENSGT00940000160065.h #27	ENSGT00940000155609.k.a.b #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a.h #34	ENSGT00390000002762.a.a.b.a.c #33	ENSGT00940000161040.a #32	ENSGT00940000156134.o	ENSGT00940000154090.b.f.b	ENSGT00940000162174.c	ENSGT00490000043380.a.j
Salmoninae_a	ANCESTRAL SPECIES	29	ENSGT00390000010265.d	ENSGT00940000159006.c.a.b	ENSGT00940000154129.gd.a.b	ENSGT00970000198185	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763.h	ENSGT00940000157748	ENSGT00940000161293.d	ENSGT00940000161314	ENSGT00990000205462.b	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b.b #19	ENSGT00390000003427.a.b #20	ENSGT00390000006305.n #22	ENSGT00550000075017.f #23	ENSGT00950000182860.a.b.a.f #24	ENSGT00950000183208.A.d.b	ENSGT00940000160235.g.b #25	ENSGT00940000160065.h #27	ENSGT00940000155609.k.a.b #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a.h #34	ENSGT00390000002762.a.a.b.a.c #33	ENSGT00940000161040.a #32	ENSGT00940000156134.o	ENSGT00940000154090.b.f.b	ENSGT00940000162174.c	ENSGT00490000043380.a.j	ENSGT00940000154900
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00390000010265.c.b	ENSGT00940000159006.c.a.b	ENSGT00940000154129.gd.a.b	ENSGT00970000198185	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804.o	ENSGT00940000160763.h	ENSGT00940000157748	ENSGT00940000161293.d	ENSGT00940000161314	ENSGT00990000205462.b	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b.b #19	ENSGT00390000003427.a.b #20	ENSGT00390000006305.n #22	ENSGT00550000075017.f #23	ENSGT00950000182860.a.b.a.f #24	ENSGT00950000183208.A.d.b	ENSGT00940000160235.g.b #25	ENSGT00940000155609.k.a.b #30	ENSGT00940000160065.h #27	ENSGT00950000182883.b.a.b.a.h #34	ENSGT00390000002762.a.a.b.a.c #33	ENSGT00940000161040.a #32	ENSGT00940000156134.o	ENSGT00940000154090.b.f.b	ENSGT00940000162174.c	ENSGT00490000043380.a.j	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	54	ENSGT00390000010265.c.b	ENSGT00940000159006.c.a.b	ENSGT00940000154129.gd.a.b	ENSGT00970000198185	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804.o	ENSGT00940000160763.h	ENSGT00940000157748	ENSGT00940000161293.d	ENSGT00940000161314	ENSGT00990000205462.b	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b.b #19	ENSGT00390000003427.a.b #20	ENSGT00390000006305.n #22	ENSGT00550000075017.f #23	ENSGT00950000182860.a.b.a.f #24	ENSGT00950000183208.A.d.b	ENSGT00940000160235.g.b #25	ENSGT00940000155609.k.a.b #30	ENSGT00940000160065.h #27	ENSGT00950000182883.b.a.b.a.h #34	ENSGT00390000002762.a.a.b.a.c #33	ENSGT00940000161040.a #32	ENSGT00940000156134.o	ENSGT00940000154090.b.f.b	ENSGT00940000162174.c	ENSGT00490000043380.a.j	ENSGT00940000154900	ENSGT00950000182810.A.a.a.a
Chinook salmon	MODERN SPECIES	309															dctn2 (ENSOTSG00005026421) #20	ddit3 (ENSOTSG00005026420) #22
Coho salmon	MODERN SPECIES		PCBP2 (ENSOKIG00005023223)	ENSOKIG00005023356	ENSOKIG00005023367	AMHR2 (ENSOKIG00005023388)	ENSOKIG00005023404	SP1 (ENSOKIG00005023422)	ENSOKIG00005023433	tarbp2 (ENSOKIG00005023447)	ENSOKIG00005023457	sp7 (ENSOKIG00005023466)	soat2 (ENSOKIG00005023472)	ENSOKIG00005023522	KIF5A (ENSOKIG00005023596) #19	ENSOKIG00005024898	dctn2 (ENSOKIG00005024922) #20	ddit3 (ENSOKIG00005025033) #22	ENSOKIG00005025047	mars1 (ENSOKIG00005025087) #23	ARHGAP9 (ENSOKIG00005025693) #24	ENSOKIG00005025741	gli1 (ENSOKIG00005025774) #25	ENSOKIG00005025861	R3HDM2 (ENSOKIG00005025940) #30	ENSOKIG00005026523 #27	ENSOKIG00005026530	NXPH4 (ENSOKIG00005026535) #34	shmt2 (ENSOKIG00005026554) #33	NDUFA4L2 (ENSOKIG00005026708) #32	fam210b (ENSOKIG00005026712)	PPP1R16B (ENSOKIG00005026717)	ENSOKIG00005026729
Rainbow trout	MODERN SPECIES	8	MAP3K12 (ENSOMYG00000030167)	PCBP2 (ENSOMYG00000030233)	prr13 (ENSOMYG00000030290)	ENSOMYG00000030312	AMHR2 (ENSOMYG00000030326)	ENSOMYG00000030352	SP1 (ENSOMYG00000030362)	ENSOMYG00000075823	ENSOMYG00000030432	sp7 (ENSOMYG00000030402)	igsf8 (ENSOMYG00000030392)	soat2 (ENSOMYG00000013534)	ENSOMYG00000058930	KIF5A (ENSOMYG00000055988) #19	dctn2 (ENSOMYG00000013443) #20	ddit3 (ENSOMYG00000013405) #22	mars1 (ENSOMYG00000013360) #23	ARHGAP9 (ENSOMYG00000013346) #24	ENSOMYG00000013334	GLI1 (ENSOMYG00000013255) #25	ENSOMYG00000073355	ENSOMYG00000067800	ENSOMYG00000069248 #30	ENSOMYG00000013220 #27	NXPH4 (ENSOMYG00000013213) #34	shmt2 (ENSOMYG00000011457) #33	NDUFA4L2 (ENSOMYG00000074259) #32	fam210b (ENSOMYG00000011356)	ENSOMYG00000055935	ENSOMYG00000066952	ENSOMYG00000011329
Salmo	ANCESTRAL SPECIES	33	ENSGT00390000010265.d	ENSGT00940000159006.c.a.b	ENSGT00940000154129.gd.a.b	ENSGT00970000198185	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763.h	ENSGT00940000157748	ENSGT00940000161293.d	ENSGT00940000161314	ENSGT00990000205462.b	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b.b #19	ENSGT00390000003427.a.b #20	ENSGT00390000006305.n #22	ENSGT00550000075017.e.a #23	ENSGT00950000182860.a.b.a.f #24	ENSGT00950000183208.A.d.b.a	ENSGT00940000160235.g.b #25	ENSGT00940000160065.h #27	ENSGT00940000155609.k.a.b #30	ENSGT00950000183092.a.d.a #31	ENSGT00950000182883.b.a.b.a.h #34	ENSGT00390000002762.a.a.b.a.c #33	ENSGT00940000161040.a #32	ENSGT00940000156134.o	ENSGT00940000154090.b.f.b	ENSGT00940000162174.c	ENSGT00490000043380.a.j	ENSGT00940000154900
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000098140	ENSSSAG00000114492	ENSSSAG00000083134	AMHR2 (ENSSSAG00000005763)	ENSSSAG00000005784	sp1 (ENSSSAG00000005792)	ENSSSAG00000005801	tarbp2 (ENSSSAG00000005813)	sp7 (ENSSSAG00000005832)	igsf8 (ENSSSAG00000090217)	ENSSSAG00000091458	soat2 (ENSSSAG00000054974)	ENSSSAG00000105805	KIF5A (ENSSSAG00000046870) #19	DCTN2 (ENSSSAG00000046757) #20	ddit3 (ENSSSAG00000106324) #22	ENSSSAG00000101325	mars1 (ENSSSAG00000046703) #23	ARHGAP9 (ENSSSAG00000046609) #24	ENSSSAG00000046598	ENSSSAG00000046521	gli1 (ENSSSAG00000046547) #25	INHBC (ENSSSAG00000104549) #27	R3HDM2 (ENSSSAG00000045994) #30	STAC3 (ENSSSAG00000045942) #31	NXPH4 (ENSSSAG00000045938) #34	GLYM (ENSSSAG00000040078) #33	NDUFA4L2 (ENSSSAG00000120770) #32	fam210b (ENSSSAG00000093027)	ENSSSAG00000031772	ENSSSAG00000094059
Huchen	MODERN SPECIES	4825															dctn2 (ENSHHUG00000010263) #20	ddit3 (ENSHHUG00000010244) #22	mars1 (ENSHHUG00000010230) #23
Northern pike	MODERN SPECIES	16	myg1 (ENSELUG00000010856)	MAP3K12 (ENSELUG00000010840)	PCBP2 (ENSELUG00000010754)	ENSELUG00000026683	AMHR2 (ENSELUG00000010715)	ENSELUG00000010697	sp1 (ENSELUG00000010685)	ENSELUG00000010666	tarbp2 (ENSELUG00000010642)	ENSELUG00000010623	sp7 (ENSELUG00000025531)	igsf8 (ENSELUG00000010602)	soat2 (ENSELUG00000010574)	KIF5A (ENSELUG00000034150) #19	dctn2 (ENSELUG00000010533) #20	ddit3 (ENSELUG00000010496) #22	mars1 (ENSELUG00000010453) #23	ARHGAP9 (ENSELUG00000010297) #24	ENSELUG00000010204	gli1 (ENSELUG00000010164) #25	INHBC (ENSELUG00000026593) #27	R3HDM2 (ENSELUG00000015969) #30	STAC3 (ENSELUG00000015859) #31	NXPH4 (ENSELUG00000019200) #34	shmt2 (ENSELUG00000019224) #33	NDUFA4L2 (ENSELUG00000019234) #32	fam210b (ENSELUG00000019248)	PPP1R16B (ENSELUG00000019307)	ENSELUG00000019348	slc32a1 (ENSELUG00000032744)	ENSELUG00000032646
Osteoglossiformes	ANCESTRAL SPECIES	34	ENSGT00390000010265	ENSGT00940000159006.c.a	ENSGT00940000154129.gd	ENSGT01060000252161	ENSGT00940000160885	ENSGT00940000167008	ENSGT00940000157804	ENSGT00940000160763	ENSGT00940000157748	ENSGT00940000161293	ENSGT00940000161314	ENSGT00950000183081.a.a.b	ENSGT00940000159439.b #19	ENSGT00390000003427 #20	ENSGT00530000064137.a.a #21	ENSGT00390000006305 #22	ENSGT00550000075017 #23	ENSGT00950000182860.a.b.a #24	ENSGT00940000168625	ENSGT00940000160235 #25	ENSGT00940000160065 #27	ENSGT00940000155609.k #30	ENSGT00950000183092.a #31	ENSGT00950000182883.b.a.b.a #34	ENSGT00390000002762.a.a.b.a #33	ENSGT00940000171242	ENSGT00940000156134	ENSGT00940000154090.b	ENSGT00940000162174	ENSGT00490000043380.a	ENSGT00940000154900
P. kingsleyae	MODERN SPECIES	51	myg1 (ENSPKIG00000001941)	MAP3K12 (ENSPKIG00000002087)	PCBP2 (ENSPKIG00000002205)	AMHR2 (ENSPKIG00000002261)	ENSPKIG00000002298	sp1 (ENSPKIG00000002335)	ENSPKIG00000002388	tarbp2 (ENSPKIG00000002455)	sp7 (ENSPKIG00000002485)	igsf8 (ENSPKIG00000002498)	soat2 (ENSPKIG00000002516)	KIF5A (ENSPKIG00000002603) #19	ENSPKIG00000002638	dctn2 (ENSPKIG00000002672) #20	ENSPKIG00000002736 #21	ddit3 (ENSPKIG00000002766) #22	mars1 (ENSPKIG00000002833) #23	ARHGAP9 (ENSPKIG00000002965) #24	ENSPKIG00000003002	gli1 (ENSPKIG00000003048) #25	INHBC (ENSPKIG00000003119) #27	R3HDM2 (ENSPKIG00000003171) #30	stac3 (ENSPKIG00000003255) #31	NXPH4 (ENSPKIG00000003288) #34	shmt2 (ENSPKIG00000003334) #33	fam210b (ENSPKIG00000003397)	PPP1R16B (ENSPKIG00000003423)	ENSPKIG00000003460	ARHGAP40 (ENSPKIG00000003490)	slc32a1 (ENSPKIG00000003580)	aurka (ENSPKIG00000003609)
Asian bonytongue	MODERN SPECIES	14	YWHAB (ENSSFOG00015010577)	RIMS4 (ENSSFOG00015031165)	ENSSFOG00015010618	ANGPT4 (ENSSFOG00015010626)	rspo4 (ENSSFOG00015010666)	sp1 (ENSSFOG00015010741)	ENSSFOG00015010761	tarbp2 (ENSSFOG00015010784)	sp7 (ENSSFOG00015010799)	igsf8 (ENSSFOG00015010807)	soat2 (ENSSFOG00015010835)	ENSSFOG00015010903	KIF5A (ENSSFOG00015010864) #19	dctn2 (ENSSFOG00015010939) #20	ENSSFOG00015010989 #21	ddit3 (ENSSFOG00015033058) #22	mars1 (ENSSFOG00015011038) #23	ARHGAP9 (ENSSFOG00015011122) #24	ENSSFOG00015027704	gli1 (ENSSFOG00015030820) #25	INHBC (ENSSFOG00015027806) #27	R3HDM2 (ENSSFOG00015011219) #30	stac3 (ENSSFOG00015011275) #31	ENSSFOG00015028766	NXPH4 (ENSSFOG00015028192) #34	shmt2 (ENSSFOG00015028462) #33	ENSSFOG00015011355	fam210b (ENSSFOG00015025330)	PPP1R16B (ENSSFOG00015011383)	ARHGAP40 (ENSSFOG00015011407)	slc32a1 (ENSSFOG00015011446)
Spotted gar	MODERN SPECIES	670	map3k12 (ENSLOCG00000005581)	pcbp2 (ENSLOCG00000005598)	AMHR2 (ENSLOCG00000005620)	ENSLOCG00000005638	sp1 (ENSLOCG00000005658)	ENSLOCG00000018204	sp7 (ENSLOCG00000005679)	ENSLOCG00000005691	tarbp2 (ENSLOCG00000005711)	ENSLOCG00000005735	igsf8 (ENSLOCG00000005749)	soat2 (ENSLOCG00000005783)	kif5aa (ENSLOCG00000005807) #19	dctn2 (ENSLOCG00000005825) #20	ENSLOCG00000005853	ddit3 (ENSLOCG00000005864) #22	ENSLOCG00000005882	ARHGAP9 (ENSLOCG00000005905) #24	ENSLOCG00000005919	gli1 (ENSLOCG00000005938) #25	INHBC (ENSLOCG00000005963) #27	R3HDM2 (ENSLOCG00000005976) #30	stac3 (ENSLOCG00000005998) #31	NDUFA4L2 (ENSLOCG00000006035) #32	shmt2 (ENSLOCG00000006059) #33	NXPH4 (ENSLOCG00000006080) #34	LRP1 (ENSLOCG00000006089) #35	ENSLOCG00000006126	rbms2b (ENSLOCG00000006148)	ENSLOCG00000006182	FAIM2 (ENSLOCG00000006201)
Reedfish	MODERN SPECIES	626				ENSECRG00000017165	ENSECRG00000016994	ENSECRG00000016814	ENSECRG00000016752	ENSECRG00000016727	ENSECRG00000016698	ENSECRG00000016650	ENSECRG00000016575	ENSECRG00000016534	kif5aa (ENSECRG00000016448) #19	dctn2 (ENSECRG00000016389) #20	ENSECRG00000016357 #21	ddit3 (ENSECRG00000016331) #22	ENSECRG00000016308	ENSECRG00000016285	mars1 (ENSECRG00000016242) #23