Chordata ANCESTRAL SPECIES ENSGT00390000016904 #22 Vertebrata ANCESTRAL SPECIES ENSGT00390000016904 #22 Gnathostomata ANCESTRAL SPECIES 72 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00940000159112.a ENSGT00940000156005 #15 ENSGT00940000156891 #14 ENSGT00940000158751 #13 ENSGT00730000111019 #12 ENSGT00390000016097 #10 Euteleostomi ANCESTRAL SPECIES 100 ENSGT00950000185492 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00940000159112.a ENSGT00940000156005 #15 ENSGT00940000156891 #14 ENSGT00770000120838.B ENSGT00940000158751 #13 ENSGT00730000111019 #12 Sarcopterygii ANCESTRAL SPECIES 85 ENSGT01030000234606.a.a.a.a ENSGT00530000063596.B ENSGT00940000159481 ENSGT00940000159230 ENSGT00940000156092 ENSGT00940000157336 ENSGT00950000182843.a.a.a.a ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00940000159112.a ENSGT00940000156005 #15 ENSGT00940000156891 #14 ENSGT00770000120838.B ENSGT00940000158751 #13 ENSGT00730000111019 #12 Tetrapoda ANCESTRAL SPECIES 85 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT01030000234606.a.a.a.a ENSGT00530000063596.B ENSGT00940000159481 ENSGT00940000159230 ENSGT00940000156092 ENSGT00940000157336 ENSGT00950000182843.a.a.a.a ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 Amniota ANCESTRAL SPECIES 8 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 ENSGT00940000156092 Mammalia ANCESTRAL SPECIES 16 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT01040000244584 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Theria ANCESTRAL SPECIES 14 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT01040000244584 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Eutheria ANCESTRAL SPECIES 12 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Glires ANCESTRAL SPECIES 12 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Rodentia ANCESTRAL SPECIES 3 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01050000245403.b ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Rodentia_B ANCESTRAL SPECIES 7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01050000245403.b ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Myomorpha ANCESTRAL SPECIES 7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01050000245403.b ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Muroidea ANCESTRAL SPECIES 16 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Upper Galilee mountains blind mole rat MODERN SPECIES 1502 Rgs6 (ENSNGAG00000015965) #7 Dpf3 (ENSNGAG00000018079) #8 Dcaf4 (ENSNGAG00000012972) #9 Zfyve1 (ENSNGAG00000009405) #10 ENSNGAG00000019959 #11 Rbm25 (ENSNGAG00000018465) #12 Psen1 (ENSNGAG00000017181) #13 Papln (ENSNGAG00000019406) #14 ENSNGAG00000012297 #15 Riox1 (ENSNGAG00000003031) #16 ENSNGAG00000001266 #17 ENSNGAG00000001269 #18 Acot4 (ENSNGAG00000010998) #19 ENSNGAG00000016652 #20 Acot6 (ENSNGAG00000015805) #21 Dnal1 (ENSNGAG00000010152) #22 Pnma1 (ENSNGAG00000015203) #23 Mideas (ENSNGAG00000008541) #24 ENSNGAG00000000298 #25 Ptgr2 (ENSNGAG00000016685) #26 Zfp410 (ENSNGAG00000000633) #27 Fam161b (ENSNGAG00000016812) #28 Coq6 (ENSNGAG00000015962) #29 Entpd5 (ENSNGAG00000011773) #30 Bbof1 (ENSNGAG00000013123) #31 Aldh6a1 (ENSNGAG00000000245) #32 Lin52 (ENSNGAG00000014697) #33 Vsx2 (ENSNGAG00000011608) #34 Abcd4 (ENSNGAG00000017662) #35 Syndig1l (ENSNGAG00000013742) #36 Npc2 (ENSNGAG00000012246) #37 Muroidea_A ANCESTRAL SPECIES 15 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #20 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Murinae ANCESTRAL SPECIES 8 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #20 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Mus ANCESTRAL SPECIES 10 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #17 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #20 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Mus_A ANCESTRAL SPECIES 17 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #17 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #20 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Mus_B ANCESTRAL SPECIES 17 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #17 ENSGT00390000000083.a #16 ENSGT00900000143211 ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #20 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Mouse MODERN SPECIES 3 Dcaf4 (ENSMUSG00000021222) #9 Zfyve1 (ENSMUSG00000042628) #10 Rbm25 (ENSMUSG00000010608) #12 Psen1 (ENSMUSG00000019969) #13 Papln (ENSMUSG00000021223) #14 Numb (ENSMUSG00000021224) #15 Riox1 (ENSMUSG00000046791) #16 Heatr4 (ENSMUSG00000090843) Acot2 (ENSMUSG00000021226) #17 Acot1 (ENSMUSG00000072949) #17 Acot4 (ENSMUSG00000052392) #19 Gm49366 (ENSMUSG00000113475) Acot3 (ENSMUSG00000021228) #20 Acot5 (ENSMUSG00000042540) #20 Acot6 (ENSMUSG00000043487) #21 Dnal1 (ENSMUSG00000042523) #22 Pnma1 (ENSMUSG00000054383) #23 Mideas (ENSMUSG00000042507) #24 Ptgr2 (ENSMUSG00000072946) #26 Zfp410 (ENSMUSG00000042472) #27 Fam161b (ENSMUSG00000021234) #28 Coq6 (ENSMUSG00000021235) #29 Entpd5 (ENSMUSG00000021236) #30 Bbof1 (ENSMUSG00000057265) #31 Rnf113a2 (ENSMUSG00000098134) Aldh6a1 (ENSMUSG00000021238) #32 Lin52 (ENSMUSG00000085793) #33 Vsx2 (ENSMUSG00000021239) #34 Abcd4 (ENSMUSG00000021240) #35 Vrtn (ENSMUSG00000071235) Syndig1l (ENSMUSG00000071234) #36 Mus_C ANCESTRAL SPECIES 11 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #17 ENSGT00390000000083.a #16 ENSGT00900000143211 ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #20 ENSGT01050000245403.a ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 spretus MODERN SPECIES 3 Dcaf4 (MGP_SPRETEiJ_G0018764) #9 Zfyve1 (MGP_SPRETEiJ_G0018765) #10 MGP_SPRETEiJ_G0018766 #12 Psen1 (MGP_SPRETEiJ_G0018767) #13 Papln (MGP_SPRETEiJ_G0018768) #14 Numb (MGP_SPRETEiJ_G0018769) #15 Riox1 (MGP_SPRETEiJ_G0018770) #16 MGP_SPRETEiJ_G0018771 Heatr4 (MGP_SPRETEiJ_G0018772) MGP_SPRETEiJ_G0018773 #17 MGP_SPRETEiJ_G0018774 #17 MGP_SPRETEiJ_G0018775 ##17 Acot3 (MGP_SPRETEiJ_G0018776) #20 Acot5 (MGP_SPRETEiJ_G0018777) #20 MGP_SPRETEiJ_G0018778 ##17 Dnal1 (MGP_SPRETEiJ_G0018779) #22 Pnma1 (MGP_SPRETEiJ_G0018780) #23 Mideas (MGP_SPRETEiJ_G0018781) #24 Ptgr2 (MGP_SPRETEiJ_G0018782) #26 Zfp410 (MGP_SPRETEiJ_G0018783) #27 Fam161b (MGP_SPRETEiJ_G0018784) #28 Coq6 (MGP_SPRETEiJ_G0018785) #29 Entpd5 (MGP_SPRETEiJ_G0018786) #30 Bbof1 (MGP_SPRETEiJ_G0018787) #31 Rnf113a2 (MGP_SPRETEiJ_G0018788) Aldh6a1 (MGP_SPRETEiJ_G0018789) #32 MGP_SPRETEiJ_G0018790 #33 Vsx2 (MGP_SPRETEiJ_G0018791) #34 Abcd4 (MGP_SPRETEiJ_G0018792) #35 Vrtn (MGP_SPRETEiJ_G0018793) Syndig1l (MGP_SPRETEiJ_G0018794) #36 Steppe mouse MODERN SPECIES 3303 Dcaf4 (ENSMSIG00000001923) #9 Zfyve1 (ENSMSIG00000001995) #10 ENSMSIG00000002025 Rbm25 (ENSMSIG00000002048) #12 Psen1 (ENSMSIG00000002158) #13 Papln (ENSMSIG00000002234) #14 ENSMSIG00000002517 #15 Heatr4 (ENSMSIG00000002642) Riox1 (ENSMSIG00000002696) #16 Acot1 (ENSMSIG00000002711) #17 Acot3 (ENSMSIG00000002760) #20 ENSMSIG00000002815 ENSMSIG00000002825 Acot5 (ENSMSIG00000002856) #20 Acot6 (ENSMSIG00000002911) #21 Dnal1 (ENSMSIG00000002943) #22 Pnma1 (ENSMSIG00000003016) #23 Mideas (ENSMSIG00000003037) #24 Ptgr2 (ENSMSIG00000003090) #26 Zfp410 (ENSMSIG00000003181) #27 ENSMSIG00000003267 #28 Coq6 (ENSMSIG00000003335) #29 Entpd5 (ENSMSIG00000003494) #30 Bbof1 (ENSMSIG00000003750) #31 Aldh6a1 (ENSMSIG00000003829) #32 ENSMSIG00000003864 #33 Vsx2 (ENSMSIG00000003898) #34 Abcd4 (ENSMSIG00000003952) #35 Vrtn (ENSMSIG00000004123) ENSMSIG00000004137 #36 Npc2 (ENSMSIG00000004195) #37 Ryukyu mouse MODERN SPECIES 3 Dcaf4 (MGP_CAROLIEiJ_G0017919) #9 Zfyve1 (MGP_CAROLIEiJ_G0017920) #10 Rbm25 (MGP_CAROLIEiJ_G0017921) #12 Psen1 (MGP_CAROLIEiJ_G0017922) #13 Papln (MGP_CAROLIEiJ_G0017923) #14 Numb (MGP_CAROLIEiJ_G0017924) #15 Riox1 (MGP_CAROLIEiJ_G0017925) #16 MGP_CAROLIEiJ_G0017926 Heatr4 (MGP_CAROLIEiJ_G0017927) Acot4 (MGP_CAROLIEiJ_G0017928) #19 MGP_CAROLIEiJ_G0017929 #17 MGP_CAROLIEiJ_G0017930 #17 Acot3 (MGP_CAROLIEiJ_G0017931) #20 Acot5 (MGP_CAROLIEiJ_G0017932) #20 Acot6 (MGP_CAROLIEiJ_G0017933) #21 Dnal1 (MGP_CAROLIEiJ_G0017934) #22 Pnma1 (MGP_CAROLIEiJ_G0017935) #23 Mideas (MGP_CAROLIEiJ_G0017936) #24 Ptgr2 (MGP_CAROLIEiJ_G0017937) #26 Zfp410 (MGP_CAROLIEiJ_G0017938) #27 Fam161b (MGP_CAROLIEiJ_G0017939) #28 Coq6 (MGP_CAROLIEiJ_G0017940) #29 Entpd5 (MGP_CAROLIEiJ_G0017941) #30 Bbof1 (MGP_CAROLIEiJ_G0017942) #31 Rnf113a2 (MGP_CAROLIEiJ_G0017943) Aldh6a1 (MGP_CAROLIEiJ_G0017944) #32 MGP_CAROLIEiJ_G0017945 #33 Vsx2 (MGP_CAROLIEiJ_G0017946) #34 Abcd4 (MGP_CAROLIEiJ_G0017947) #35 Vrtn (MGP_CAROLIEiJ_G0017948) Syndig1l (MGP_CAROLIEiJ_G0017949) #36 Shrew mouse MODERN SPECIES 20 Psen1 (MGP_PahariEiJ_G0029678) #13 Papln (MGP_PahariEiJ_G0029679) #14 Numb (MGP_PahariEiJ_G0029680) #15 Riox1 (MGP_PahariEiJ_G0029681) #16 MGP_PahariEiJ_G0029682 Heatr4 (MGP_PahariEiJ_G0029683) Or8b47 (MGP_PahariEiJ_G0029684) MGP_PahariEiJ_G0029685 MGP_PahariEiJ_G0029686 MGP_PahariEiJ_G0029687 #17 MGP_PahariEiJ_G0029688 #17 Acot4 (MGP_PahariEiJ_G0029689) #19 MGP_PahariEiJ_G0029690 ##17 Acot5 (MGP_PahariEiJ_G0029691) #20 Acot6 (MGP_PahariEiJ_G0029692) #21 Dnal1 (MGP_PahariEiJ_G0029693) #22 Pnma1 (MGP_PahariEiJ_G0029694) #23 Mideas (MGP_PahariEiJ_G0029695) #24 Ptgr2 (MGP_PahariEiJ_G0029696) #26 Zfp410 (MGP_PahariEiJ_G0029697) #27 Fam161b (MGP_PahariEiJ_G0029698) #28 Coq6 (MGP_PahariEiJ_G0029699) #29 Entpd5 (MGP_PahariEiJ_G0029700) #30 Bbof1 (MGP_PahariEiJ_G0029701) #31 Rnf113a2 (MGP_PahariEiJ_G0029702) Aldh6a1 (MGP_PahariEiJ_G0029703) #32 MGP_PahariEiJ_G0029704 #33 Vsx2 (MGP_PahariEiJ_G0029705) #34 Abcd4 (MGP_PahariEiJ_G0029706) #35 Vrtn (MGP_PahariEiJ_G0029707) Syndig1l (MGP_PahariEiJ_G0029708) #36 Rat MODERN SPECIES 16 Zfyve1 (ENSRNOG00000008614) #10 Rbm25 (ENSRNOG00000002874) #12 Psen1 (ENSRNOG00000009110) #13 Papln (ENSRNOG00000009448) #14 Numb (ENSRNOG00000009653) #15 Heatr4 (ENSRNOG00000038183) Riox1 (ENSRNOG00000010126) #16 Acot2 (ENSRNOG00000010134) #17 Acot1 (ENSRNOG00000055221) #17 Acot4 (ENSRNOG00000046864) #19 Acot3 (ENSRNOG00000027960) #20 ENSRNOG00000067599 Acot5 (ENSRNOG00000032508) #20 Acot3 (ENSRNOG00000053460) #20 Acot6 (ENSRNOG00000029637) #21 Dnal1 (ENSRNOG00000042333) #22 Pnma1 (ENSRNOG00000010553) #23 Mideas (ENSRNOG00000010653) #24 Ptgr2 (ENSRNOG00000038166) #26 Zfp410 (ENSRNOG00000010985) #27 Fam161b (ENSRNOG00000011112) #28 Coq6 (ENSRNOG00000011164) #29 Entpd5 (ENSRNOG00000033206) #30 Bbof1 (ENSRNOG00000011376) #31 Rnf113a2 (ENSRNOG00000067995) Aldh6a1 (ENSRNOG00000011419) #32 Lin52 (ENSRNOG00000043441) #33 Vsx2 (ENSRNOG00000011918) #34 Abcd4 (ENSRNOG00000011964) #35 Vrtn (ENSRNOG00000048378) Syndig1l (ENSRNOG00000027645) #36 Cricetidae ANCESTRAL SPECIES 17 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #17 ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Cricetinae ANCESTRAL SPECIES 11 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00900000143211 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #17 ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Golden Hamster MODERN SPECIES 835 Acot4 (ENSMAUG00000012492) #19 ENSMAUG00000020834 #17 Acot5 (ENSMAUG00000020838) #20 Acot6 (ENSMAUG00000019222) #21 Dnal1 (ENSMAUG00000017147) #22 Pnma1 (ENSMAUG00000017335) #23 Mideas (ENSMAUG00000018194) #24 Ptgr2 (ENSMAUG00000010550) #26 Zfp410 (ENSMAUG00000018652) #27 Fam161b (ENSMAUG00000001201) #28 Coq6 (ENSMAUG00000011130) #29 Entpd5 (ENSMAUG00000014342) #30 Bbof1 (ENSMAUG00000012362) #31 Aldh6a1 (ENSMAUG00000016891) #32 Lin52 (ENSMAUG00000011456) #33 Vsx2 (ENSMAUG00000017695) #34 Abcd4 (ENSMAUG00000011789) #35 ENSMAUG00000017258 Syndig1l (ENSMAUG00000013945) #36 Npc2 (ENSMAUG00000020689) #37 Chinese hamster chok1gshd MODERN SPECIES 2 Papln (ENSCGRG00001003202) #14 ENSCGRG00001000963 Numb (ENSCGRG00001016054) #15 ENSCGRG00001014450 ENSCGRG00001010571 ENSCGRG00001011878 Riox1 (ENSCGRG00001010518) #16 Heatr4 (ENSCGRG00001008018) ENSCGRG00001005504 #17 ENSCGRG00001000843 #17 Acot4 (ENSCGRG00001007771) #19 ENSCGRG00001011559 #17 ENSCGRG00001023275 #20 ENSCGRG00001020145 #20 Acot6 (ENSCGRG00001019681) #21 Dnal1 (ENSCGRG00001016988) #22 Pnma1 (ENSCGRG00001010465) #23 Mideas (ENSCGRG00001021773) #24 Ptgr2 (ENSCGRG00001015947) #26 Zfp410 (ENSCGRG00001014072) #27 Fam161b (ENSCGRG00001024553) #28 Coq6 (ENSCGRG00001024043) #29 Entpd5 (ENSCGRG00001021581) #30 Bbof1 (ENSCGRG00001001301) #31 Aldh6a1 (ENSCGRG00001024154) #32 Lin52 (ENSCGRG00001023668) #33 Vsx2 (ENSCGRG00001023191) #34 Abcd4 (ENSCGRG00001022187) #35 Vrtn (ENSCGRG00001013127) Syndig1l (ENSCGRG00001013830) #36 Npc2 (ENSCGRG00001012790) #37 Cricetidae_B ANCESTRAL SPECIES 18 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.a.a.c.b.b #17 ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #20 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Prairie vole MODERN SPECIES Rbm25 (ENSMOCG00000001935) #12 ENSMOCG00000005921 Psen1 (ENSMOCG00000009775) #13 ENSMOCG00000005015 Papln (ENSMOCG00000001461) #14 Numb (ENSMOCG00000022280) #15 Riox1 (ENSMOCG00000007570) #16 Heatr4 (ENSMOCG00000015139) ENSMOCG00000005730 #17 ENSMOCG00000021013 ENSMOCG00000005600 #17 Acot4 (ENSMOCG00000013343) #19 ENSMOCG00000018416 #17 Acot5 (ENSMOCG00000000977) #20 Acot6 (ENSMOCG00000004025) #21 Dnal1 (ENSMOCG00000022267) #22 Pnma1 (ENSMOCG00000006996) #23 Mideas (ENSMOCG00000019740) #24 Ptgr2 (ENSMOCG00000010724) #26 Zfp410 (ENSMOCG00000017363) #27 Fam161b (ENSMOCG00000001828) #28 Coq6 (ENSMOCG00000006495) #29 Entpd5 (ENSMOCG00000020144) #30 Bbof1 (ENSMOCG00000001378) #31 Aldh6a1 (ENSMOCG00000018307) #32 Lin52 (ENSMOCG00000017855) #33 Vsx2 (ENSMOCG00000020119) #34 Abcd4 (ENSMOCG00000022046) #35 Vrtn (ENSMOCG00000011795) Syndig1l (ENSMOCG00000013518) #36 Npc2 (ENSMOCG00000013949) #37 Northern American deer mouse MODERN SPECIES 5 Dcaf4 (ENSPEMG00000009925) #9 Zfyve1 (ENSPEMG00000008691) #10 Rbm25 (ENSPEMG00000008001) #12 Psen1 (ENSPEMG00000006667) #13 Papln (ENSPEMG00000000670) #14 Numb (ENSPEMG00000018950) #15 Riox1 (ENSPEMG00000018431) #16 Heatr4 (ENSPEMG00000010857) ENSPEMG00000011640 #17 ENSPEMG00000007692 #17 Acot4 (ENSPEMG00000024969) #19 ENSPEMG00000009464 #17 ENSPEMG00000007003 #20 Acot6 (ENSPEMG00000020726) #21 ENSPEMG00000027213 ENSPEMG00000030670 #22 ENSPEMG00000025553 Pnma1 (ENSPEMG00000001767) #23 Mideas (ENSPEMG00000020623) #24 Ptgr2 (ENSPEMG00000020776) #26 Zfp410 (ENSPEMG00000022416) #27 Fam161b (ENSPEMG00000021215) #28 Coq6 (ENSPEMG00000020368) #29 Entpd5 (ENSPEMG00000023217) #30 Bbof1 (ENSPEMG00000020680) #31 Aldh6a1 (ENSPEMG00000021209) #32 Lin52 (ENSPEMG00000016158) #33 Vsx2 (ENSPEMG00000014515) #34 Abcd4 (ENSPEMG00000021386) #35 Vrtn (ENSPEMG00000020660) Syndig1l (ENSPEMG00000030499) #36 Lesser Egyptian jerboa MODERN SPECIES 41 Tnfaip2 (ENSJJAG00000010132) Sipa1l1 (ENSJJAG00000023961) Rgs6 (ENSJJAG00000022127) #7 Dpf3 (ENSJJAG00000014377) #8 Dcaf4 (ENSJJAG00000021188) #9 ENSJJAG00000018792 #10 ENSJJAG00000024002 ENSJJAG00000022825 Psen1 (ENSJJAG00000002135) #13 Papln (ENSJJAG00000000927) #14 Numb (ENSJJAG00000019014) #15 Riox1 (ENSJJAG00000019037) #16 Heatr4 (ENSJJAG00000018627) ENSJJAG00000014618 #19 ENSJJAG00000011596 Dnal1 (ENSJJAG00000017347) #22 Pnma1 (ENSJJAG00000002278) #23 Mideas (ENSJJAG00000012181) #24 Ptgr2 (ENSJJAG00000004075) #26 Zfp410 (ENSJJAG00000011182) #27 Fam161b (ENSJJAG00000010436) #28 Coq6 (ENSJJAG00000013225) #29 Entpd5 (ENSJJAG00000012303) #30 Bbof1 (ENSJJAG00000012977) #31 Aldh6a1 (ENSJJAG00000005519) #32 ENSJJAG00000015460 #33 Vsx2 (ENSJJAG00000011877) #34 Abcd4 (ENSJJAG00000014302) #35 Vrtn (ENSJJAG00000008057) Syndig1l (ENSJJAG00000012505) #36 Npc2 (ENSJJAG00000017648) #37 Kangaroo rat MODERN SPECIES 321 ENSDORG00000023931 Rgs6 (ENSDORG00000015367) #7 Dpf3 (ENSDORG00000007820) #8 Dcaf4 (ENSDORG00000002888) #9 Zfyve1 (ENSDORG00000015230) #10 Rbm25 (ENSDORG00000013247) #12 Psen1 (ENSDORG00000001780) #13 Papln (ENSDORG00000007325) #14 Numb (ENSDORG00000007326) #15 Riox1 (ENSDORG00000028870) #16 Heatr4 (ENSDORG00000005873) ENSDORG00000013571 #17 ENSDORG00000005537 #20 ENSDORG00000013097 #20 ENSDORG00000000064 #21 Dnal1 (ENSDORG00000015187) #22 ENSDORG00000025611 ##23 Mideas (ENSDORG00000015681) #24 Ptgr2 (ENSDORG00000024075) #26 Zfp410 (ENSDORG00000009293) #27 Fam161b (ENSDORG00000009295) #28 Coq6 (ENSDORG00000009297) #29 ENSDORG00000001878 #30 Rnf113a2 (ENSDORG00000027624) ENSDORG00000005218 #31 Aldh6a1 (ENSDORG00000005224) #32 Lin52 (ENSDORG00000025156) #33 Vsx2 (ENSDORG00000010911) #34 Abcd4 (ENSDORG00000010912) #35 Vrtn (ENSDORG00000010914) Syndig1l (ENSDORG00000014474) #36 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.b #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Sciuridae ANCESTRAL SPECIES 8 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.b #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402.f #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Marmotini ANCESTRAL SPECIES 27 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.b #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.m #17 ENSGT01010000222336.a.a.a.ob.a.a.c.b.n #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402.f #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Alpin marmot MODERN SPECIES 1 PCNX1 (ENSMMMG00000015257) SIPA1L1 (ENSMMMG00000015319) RGS6 (ENSMMMG00000015497) #7 DPF3 (ENSMMMG00000015579) #8 ENSMMMG00000015602 #9 ZFYVE1 (ENSMMMG00000015623) #10 RBM25 (ENSMMMG00000015650) #12 PSEN1 (ENSMMMG00000015676) #13 PAPLN (ENSMMMG00000015699) #14 NUMB (ENSMMMG00000015813) #15 RIOX1 (ENSMMMG00000015975) #16 ENSMMMG00000015982 #17 ENSMMMG00000015989 #17 ENSMMMG00000015998 #17 ENSMMMG00000016020 #21 DNAL1 (ENSMMMG00000016024) #22 PNMA1 (ENSMMMG00000016038) #23 MIDEAS (ENSMMMG00000016040) #24 PTGR2 (ENSMMMG00000016067) #26 ENSMMMG00000016079 ZNF410 (ENSMMMG00000016081) #27 FAM161B (ENSMMMG00000016102) #28 COQ6 (ENSMMMG00000016120) #29 ENTPD5 (ENSMMMG00000016134) #30 BBOF1 (ENSMMMG00000016213) #31 ALDH6A1 (ENSMMMG00000016229) #32 LIN52 (ENSMMMG00000016244) #33 VSX2 (ENSMMMG00000016247) #34 ABCD4 (ENSMMMG00000016264) #35 VRTN (ENSMMMG00000016304) SYNDIG1L (ENSMMMG00000016305) #36 Marmotini_b ANCESTRAL SPECIES 31 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.b #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b.m #17 ENSGT01010000222336.a.a.a.ob.a.a.c.b.n #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402.f #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Squirrel MODERN SPECIES 88 SIPA1L1 (ENSSTOG00000010105) RGS6 (ENSSTOG00000013412) #7 DPF3 (ENSSTOG00000011091) #8 ENSSTOG00000020210 #9 ZFYVE1 (ENSSTOG00000011109) #10 RBM25 (ENSSTOG00000011117) #12 PSEN1 (ENSSTOG00000003845) #13 PAPLN (ENSSTOG00000003857) #14 ENSSTOG00000003900 #15 RIOX1 (ENSSTOG00000024278) #16 HEATR4 (ENSSTOG00000007745) ENSSTOG00000032187 #17 ENSSTOG00000003345 #17 ACOT4 (ENSSTOG00000003338) #19 ACOT6 (ENSSTOG00000003091) #21 DNAL1 (ENSSTOG00000000420) #22 ENSSTOG00000029464 PNMA1 (ENSSTOG00000000422) #23 MIDEAS (ENSSTOG00000000423) #24 PTGR2 (ENSSTOG00000008590) #26 ZNF410 (ENSSTOG00000024235) #27 FAM161B (ENSSTOG00000029202) #28 COQ6 (ENSSTOG00000016439) #29 ENTPD5 (ENSSTOG00000008069) #30 ENSSTOG00000008087 #31 ALDH6A1 (ENSSTOG00000028534) #32 LIN52 (ENSSTOG00000029773) #33 VSX2 (ENSSTOG00000008114) #34 ABCD4 (ENSSTOG00000009827) #35 VRTN (ENSSTOG00000021434) SYNDIG1L (ENSSTOG00000007981) #36 Arctic ground squirrel MODERN SPECIES 8 PCNX1 (ENSUPAG00010015898) SIPA1L1 (ENSUPAG00010015844) RGS6 (ENSUPAG00010015605) #7 DPF3 (ENSUPAG00010015555) #8 ENSUPAG00010015527 #9 ZFYVE1 (ENSUPAG00010015501) #10 RBM25 (ENSUPAG00010015461) #12 PSEN1 (ENSUPAG00010015426) #13 PAPLN (ENSUPAG00010015337) #14 NUMB (ENSUPAG00010015200) #15 RIOX1 (ENSUPAG00010015192) #16 ENSUPAG00010015167 ENSUPAG00010015131 #17 ACOT4 (ENSUPAG00010015117) #19 ACOT6 (ENSUPAG00010015106) #21 DNAL1 (ENSUPAG00010015067) #22 PNMA1 (ENSUPAG00010015061) #23 MIDEAS (ENSUPAG00010014994) #24 ENSUPAG00010014987 PTGR2 (ENSUPAG00010014963) #26 ZNF410 (ENSUPAG00010014867) #27 FAM161B (ENSUPAG00010014838) #28 COQ6 (ENSUPAG00010014809) #29 ENTPD5 (ENSUPAG00010014644) #30 BBOF1 (ENSUPAG00010014608) #31 ALDH6A1 (ENSUPAG00010014582) #32 LIN52 (ENSUPAG00010014569) #33 VSX2 (ENSUPAG00010014562) #34 ABCD4 (ENSUPAG00010014503) #35 VRTN (ENSUPAG00010014491) SYNDIG1L (ENSUPAG00010014486) #36 Eurasian red squirrel MODERN SPECIES 11 DPF3 (ENSSVLG00005008293) #8 ENSSVLG00005008049 #9 ZFYVE1 (ENSSVLG00005007958) #10 RBM25 (ENSSVLG00005007885) #12 PSEN1 (ENSSVLG00005007728) #13 PAPLN (ENSSVLG00005007348) #14 NUMB (ENSSVLG00005007168) #15 RIOX1 (ENSSVLG00005007089) #16 ENSSVLG00005007042 ENSSVLG00005007000 #17 ENSSVLG00005006975 ENSSVLG00005006698 #17 ENSSVLG00005006583 ACOT4 (ENSSVLG00005006548) #19 ENSSVLG00005006522 #21 DNAL1 (ENSSVLG00005006438) #22 PNMA1 (ENSSVLG00005006415) #23 MIDEAS (ENSSVLG00005006379) #24 PTGR2 (ENSSVLG00005006327) #26 ZNF410 (ENSSVLG00005006231) #27 FAM161B (ENSSVLG00005006140) #28 COQ6 (ENSSVLG00005006026) #29 ENTPD5 (ENSSVLG00005005845) #30 BBOF1 (ENSSVLG00005005756) #31 ALDH6A1 (ENSSVLG00005005600) #32 ENSSVLG00005005569 ENSSVLG00005005534 #33 VSX2 (ENSSVLG00005005496) #34 ABCD4 (ENSSVLG00005005450) #35 VRTN (ENSSVLG00005005435) SYNDIG1L (ENSSVLG00005005404) #36 Hystricomorpha ANCESTRAL SPECIES 33 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.a #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Hystricomorpha_a ANCESTRAL SPECIES 27 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.a #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000016292.g.a.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Guinea pig MODERN SPECIES 20 ENSCPOG00000033708 SIPA1L1 (ENSCPOG00000013071) RGS6 (ENSCPOG00000007309) #7 DPF3 (ENSCPOG00000007322) #8 ENSCPOG00000013878 #9 ZFYVE1 (ENSCPOG00000013880) #10 RBM25 (ENSCPOG00000002479) #12 PSEN1 (ENSCPOG00000035027) #13 PAPLN (ENSCPOG00000019279) #14 NUMB (ENSCPOG00000034984) #15 RIOX1 (ENSCPOG00000024797) #16 ENSCPOG00000038505 #17 HEATR4 (ENSCPOG00000001833) ACOT4 (ENSCPOG00000036993) #19 ACOT6 (ENSCPOG00000032534) #21 DNAL1 (ENSCPOG00000010655) #22 PNMA1 (ENSCPOG00000010657) #23 MIDEAS (ENSCPOG00000010659) #24 PTGR2 (ENSCPOG00000027073) #26 ZNF410 (ENSCPOG00000009601) #27 FAM161B (ENSCPOG00000040022) #28 COQ6 (ENSCPOG00000009610) #29 ENTPD5 (ENSCPOG00000009621) #30 ENSCPOG00000015588 #31 RNF113A (ENSCPOG00000038517) ALDH6A1 (ENSCPOG00000000015) #32 LIN52 (ENSCPOG00000003170) #33 VSX2 (ENSCPOG00000003172) #34 ABCD4 (ENSCPOG00000004776) #35 VRTN (ENSCPOG00000038635) SYNDIG1L (ENSCPOG00000012367) #36 Hystricomorpha_b ANCESTRAL SPECIES 46 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.a #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.c.b #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 ENSGT00390000005700 Long-tailed chinchilla MODERN SPECIES 230 RGS6 (ENSCLAG00000004860) #7 DPF3 (ENSCLAG00000004345) #8 ENSCLAG00000004165 #9 ZFYVE1 (ENSCLAG00000004097) #10 RBM25 (ENSCLAG00000003977) #12 PSEN1 (ENSCLAG00000005284) #13 PAPLN (ENSCLAG00000004775) #14 ENSCLAG00000004464 #15 ENSCLAG00000004315 RIOX1 (ENSCLAG00000004260) #16 HEATR4 (ENSCLAG00000004180) ENSCLAG00000004124 #17 ACOT4 (ENSCLAG00000004063) #19 ENSCLAG00000004019 #17 ENSCLAG00000003947 #21 DNAL1 (ENSCLAG00000003917) #22 MIDEAS (ENSCLAG00000003802) #24 PTGR2 (ENSCLAG00000003701) #26 ZNF410 (ENSCLAG00000003640) #27 FAM161B (ENSCLAG00000003575) #28 COQ6 (ENSCLAG00000003521) #29 ENTPD5 (ENSCLAG00000003418) #30 ENSCLAG00000003357 #31 ALDH6A1 (ENSCLAG00000003304) #32 LIN52 (ENSCLAG00000003236) #33 VSX2 (ENSCLAG00000006640) #34 ABCD4 (ENSCLAG00000006557) #35 VRTN (ENSCLAG00000006514) SYNDIG1L (ENSCLAG00000006492) #36 NPC2 (ENSCLAG00000006435) #37 ISCA2 (ENSCLAG00000006410) Naked mole-rat female MODERN SPECIES 18 ENSHGLG00000047889 ZFYVE1 (ENSHGLG00000015923) #10 ENSHGLG00000035871 ENSHGLG00000014745 #12 PSEN1 (ENSHGLG00000044979) #13 PAPLN (ENSHGLG00000013495) #14 ENSHGLG00000017752 #15 ENSHGLG00000039431 ENSHGLG00000039363 ENSHGLG00000049066 RIOX1 (ENSHGLG00000034391) #16 ENSHGLG00000047596 ##17 ENSHGLG00000048609 ACOT6 (ENSHGLG00000040633) #21 ENSHGLG00000013635 DNAL1 (ENSHGLG00000013059) #22 PNMA1 (ENSHGLG00000050390) #23 MIDEAS (ENSHGLG00000012075) #24 PTGR2 (ENSHGLG00000009670) #26 ZNF410 (ENSHGLG00000008562) #27 FAM161B (ENSHGLG00000007604) #28 COQ6 (ENSHGLG00000006532) #29 ENTPD5 (ENSHGLG00000044767) #30 ENSHGLG00000045022 ALDH6A1 (ENSHGLG00000008121) #32 LIN52 (ENSHGLG00000045214) #33 VSX2 (ENSHGLG00000010609) #34 ABCD4 (ENSHGLG00000019040) #35 SYNDIG1L (ENSHGLG00000013920) #36 NPC2 (ENSHGLG00000013107) #37 ISCA2 (ENSHGLG00000049377) Lagomorpha ANCESTRAL SPECIES 25 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 ENSGT00390000005700 Rabbit MODERN SPECIES 12 RGS6 (ENSOCUG00000000341) #7 ENSOCUG00000031853 DPF3 (ENSOCUG00000016740) #8 ENSOCUG00000009405 #9 ZFYVE1 (ENSOCUG00000008398) #10 RBM25 (ENSOCUG00000013737) #12 PSEN1 (ENSOCUG00000014545) #13 PAPLN (ENSOCUG00000010681) #14 NUMB (ENSOCUG00000010702) #15 ENSOCUG00000031673 RIOX1 (ENSOCUG00000021858) #16 HEATR4 (ENSOCUG00000005994) ENSOCUG00000030890 ENSOCUG00000022543 #19 ENSOCUG00000029229 #21 DNAL1 (ENSOCUG00000007284) #22 MIDEAS (ENSOCUG00000007290) #24 PTGR2 (ENSOCUG00000006785) #26 ZNF410 (ENSOCUG00000006787) #27 FAM161B (ENSOCUG00000006791) #28 COQ6 (ENSOCUG00000006799) #29 ENSOCUG00000006803 #30 BBOF1 (ENSOCUG00000017487) #31 ALDH6A1 (ENSOCUG00000025121) #32 LIN52 (ENSOCUG00000017491) #33 VSX2 (ENSOCUG00000017496) #34 ABCD4 (ENSOCUG00000003484) #35 VRTN (ENSOCUG00000027081) SYNDIG1L (ENSOCUG00000015989) #36 ENSOCUG00000035144 NPC2 (ENSOCUG00000014067) #37 Pika MODERN SPECIES 595 DNAL1 (ENSOPRG00000010636) #22 ENSOPRG00000010648 Tree shrew MODERN SPECIES 4705 HEATR4 (ENSTBEG00000009463) ENSTBEG00000002703 #17 DNAL1 (ENSTBEG00000003484) #22 ENSTBEG00000004924 Primates ANCESTRAL SPECIES 2 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Lemuriformes ANCESTRAL SPECIES 28 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Mouse lemur MODERN SPECIES 22 ENSMICG00000015497 #9 ZFYVE1 (ENSMICG00000015510) #10 RBM25 (ENSMICG00000034082) #12 PSEN1 (ENSMICG00000017923) #13 ENSMICG00000035778 ENSMICG00000047520 PAPLN (ENSMICG00000017924) #14 ENSMICG00000017925 #15 HEATR4 (ENSMICG00000008517) ENSMICG00000002778 #19 ENSMICG00000046968 #17 ENSMICG00000044045 #17 ENSMICG00000035134 #19 ENSMICG00000036692 ACOT6 (ENSMICG00000033023) #21 DNAL1 (ENSMICG00000032196) #22 PNMA1 (ENSMICG00000002795) #23 MIDEAS (ENSMICG00000002805) #24 PTGR2 (ENSMICG00000029962) #26 ZNF410 (ENSMICG00000002992) #27 FAM161B (ENSMICG00000002998) #28 COQ6 (ENSMICG00000003007) #29 ENTPD5 (ENSMICG00000003012) #30 ENSMICG00000033736 BBOF1 (ENSMICG00000008464) #31 ALDH6A1 (ENSMICG00000008467) #32 LIN52 (ENSMICG00000008474) #33 VSX2 (ENSMICG00000037778) #34 ABCD4 (ENSMICG00000008482) #35 SYNDIG1L (ENSMICG00000027038) #36 NPC2 (ENSMICG00000006008) #37 Lemuriformes_a ANCESTRAL SPECIES 11 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 472 OOEP (ENSPSMG00000004311) KHDC3L (ENSPSMG00000004291) DPPA5 (ENSPSMG00000004280) ENSPSMG00000004267 ENSPSMG00000004262 ENSPSMG00000004251 ENSPSMG00000004217 ENSPSMG00000004214 KCNQ5 (ENSPSMG00000004160) ENSPSMG00000004077 RIMS1 (ENSPSMG00000003296) ENSPSMG00000002841 ENSPSMG00000002840 OGFRL1 (ENSPSMG00000002822) B3GAT2 (ENSPSMG00000002804) ENSPSMG00000002792 #22 SMAP1 (ENSPSMG00000002512) SDHAF4 (ENSPSMG00000002368) FAM135A (ENSPSMG00000001714) COL9A1 (ENSPSMG00000001412) COL19A1 (ENSPSMG00000001351) Greater bamboo lemur MODERN SPECIES 802 SIPA1L1 (ENSPSMG00000014702) RGS6 (ENSPSMG00000015304) #7 DPF3 (ENSPSMG00000015731) #8 ENSPSMG00000015744 ENSPSMG00000015813 #9 ZFYVE1 (ENSPSMG00000015851) #10 ENSPSMG00000015868 ENSPSMG00000015962 #12 PSEN1 (ENSPSMG00000016104) #13 PAPLN (ENSPSMG00000016270) #14 NUMB (ENSPSMG00000016550) #15 RIOX1 (ENSPSMG00000016647) #16 ENSPSMG00000016650 ACOT4 (ENSPSMG00000016672) #19 ENSPSMG00000016682 #21 ENSPSMG00000016693 #22 SOX3 (ENSPSMG00000016701) Coquerels sifaka MODERN SPECIES 653 PCNX1 (ENSPCOG00000015594) SIPA1L1 (ENSPCOG00000026510) RGS6 (ENSPCOG00000021594) #7 DPF3 (ENSPCOG00000022441) #8 ENSPCOG00000022782 #9 ZFYVE1 (ENSPCOG00000017005) #10 RBM25 (ENSPCOG00000023107) #12 PSEN1 (ENSPCOG00000018929) #13 PAPLN (ENSPCOG00000010404) #14 NUMB (ENSPCOG00000019381) #15 HEATR4 (ENSPCOG00000015681) ENSPCOG00000028629 #17 ACOT4 (ENSPCOG00000026670) #19 ENSPCOG00000020459 #17 ENSPCOG00000020943 #21 DNAL1 (ENSPCOG00000025043) #22 PNMA1 (ENSPCOG00000013444) #23 MIDEAS (ENSPCOG00000022588) #24 PTGR2 (ENSPCOG00000023980) #26 ZNF410 (ENSPCOG00000021079) #27 FAM161B (ENSPCOG00000002979) #28 COQ6 (ENSPCOG00000023336) #29 ENTPD5 (ENSPCOG00000019244) #30 BBOF1 (ENSPCOG00000009977) #31 ALDH6A1 (ENSPCOG00000023367) #32 LIN52 (ENSPCOG00000002646) #33 VSX2 (ENSPCOG00000020252) #34 ABCD4 (ENSPCOG00000013720) #35 SYNDIG1L (ENSPCOG00000019267) #36 NPC2 (ENSPCOG00000023731) #37 ISCA2 (ENSPCOG00000018511) Bushbaby MODERN SPECIES 135 RIOX1 (ENSOGAG00000027192) #16 ACOT4 (ENSOGAG00000032824) #19 ACOT6 (ENSOGAG00000003958) #21 DNAL1 (ENSOGAG00000032854) #22 PNMA1 (ENSOGAG00000004052) #23 MIDEAS (ENSOGAG00000004053) #24 PTGR2 (ENSOGAG00000014524) #26 ZNF410 (ENSOGAG00000025936) #27 FAM161B (ENSOGAG00000006404) #28 COQ6 (ENSOGAG00000006406) #29 ENTPD5 (ENSOGAG00000006408) #30 ALDH6A1 (ENSOGAG00000003006) #32 LIN52 (ENSOGAG00000003009) #33 VSX2 (ENSOGAG00000013552) #34 ABCD4 (ENSOGAG00000013557) #35 VRTN (ENSOGAG00000024981) SYNDIG1L (ENSOGAG00000030617) #36 NPC2 (ENSOGAG00000002697) #37 ISCA2 (ENSOGAG00000002698) Haplorrhini ANCESTRAL SPECIES 12 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Tarsier MODERN SPECIES 4828 ENSTSYG00000032252 #21 ENSTSYG00000026808 DNAL1 (ENSTSYG00000002389) #22 FAM189B (ENSTSYG00000003501) SCAMP3 (ENSTSYG00000030406) CLK2 (ENSTSYG00000009569) HCN3 (ENSTSYG00000014677) PKLR (ENSTSYG00000014679) Simiiformes ANCESTRAL SPECIES 2 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00940000160251.h Catarrhini ANCESTRAL SPECIES 9 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00910000147388 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00900000143785 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Cercopithecidae ANCESTRAL SPECIES 7 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00910000147388 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00900000143785 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Rhinopithecus ANCESTRAL SPECIES 42 ENSGT01010000222336.a.a.a.ob.a.a.p #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00900000143785 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Golden snub-nosed monkey MODERN SPECIES 2365 ENSRROG00000039230 ENSRROG00000044029 #17 ACOT4 (ENSRROG00000035674) #19 ACOT6 (ENSRROG00000041609) #21 DNAL1 (ENSRROG00000028552) #22 PNMA1 (ENSRROG00000018099) #23 MIDEAS (ENSRROG00000042693) #24 ENSRROG00000041797 PTGR2 (ENSRROG00000034050) #26 ZNF410 (ENSRROG00000031456) #27 ENSRROG00000035842 #28 COQ6 (ENSRROG00000045708) #29 ENTPD5 (ENSRROG00000041922) #30 BBOF1 (ENSRROG00000039245) #31 ALDH6A1 (ENSRROG00000035589) #32 LIN52 (ENSRROG00000038659) #33 VSX2 (ENSRROG00000035399) #34 ABCD4 (ENSRROG00000036607) #35 VRTN (ENSRROG00000010435) SYNDIG1L (ENSRROG00000041128) #36 Black snub-nosed monkey MODERN SPECIES 656 ACOT6 (ENSRBIG00000031474) #21 DNAL1 (ENSRBIG00000037570) #22 PNMA1 (ENSRBIG00000018022) #23 MIDEAS (ENSRBIG00000036636) #24 ENSRBIG00000032893 PTGR2 (ENSRBIG00000036431) #26 ZNF410 (ENSRBIG00000029693) #27 FAM161B (ENSRBIG00000036131) #28 COQ6 (ENSRBIG00000039056) #29 ENTPD5 (ENSRBIG00000032979) #30 BBOF1 (ENSRBIG00000031361) #31 ALDH6A1 (ENSRBIG00000034701) #32 LIN52 (ENSRBIG00000040121) #33 VSX2 (ENSRBIG00000030815) #34 ABCD4 (ENSRBIG00000031434) #35 VRTN (ENSRBIG00000024397) SYNDIG1L (ENSRBIG00000032309) #36 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00900000143785 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Vervet Monkey MODERN SPECIES 16 PCNX1 (ENSCSAG00000012945) ENSCSAG00000012924 SIPA1L1 (ENSCSAG00000012918) ENSCSAG00000012896 RGS6 (ENSCSAG00000012876) #7 DPF3 (ENSCSAG00000012864) #8 DCAF4 (ENSCSAG00000012844) #9 ZFYVE1 (ENSCSAG00000012822) #10 RBM25 (ENSCSAG00000012801) #12 PSEN1 (ENSCSAG00000012773) #13 PAPLN (ENSCSAG00000012756) #14 NUMB (ENSCSAG00000012724) #15 ENSCSAG00000012717 #17 ACOT4 (ENSCSAG00000012700) #19 ENSCSAG00000019571 #21 DNAL1 (ENSCSAG00000012693) #22 PNMA1 (ENSCSAG00000019572) #23 MIDEAS (ENSCSAG00000012679) #24 PTGR2 (ENSCSAG00000012670) #26 ZNF410 (ENSCSAG00000012661) #27 FAM161B (ENSCSAG00000012650) #28 COQ6 (ENSCSAG00000012631) #29 ENTPD5 (ENSCSAG00000012613) #30 BBOF1 (ENSCSAG00000012603) #31 ALDH6A1 (ENSCSAG00000012592) #32 LIN52 (ENSCSAG00000012576) #33 VSX2 (ENSCSAG00000012566) #34 ABCD4 (ENSCSAG00000012543) #35 VRTN (ENSCSAG00000019573) SYNDIG1L (ENSCSAG00000012533) #36 NPC2 (ENSCSAG00000012527) #37 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00900000143785 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00390000017443.s.a.a ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 Macaca ANCESTRAL SPECIES 1 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00390000017443.s.a.a ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Macaca_a ANCESTRAL SPECIES 2 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00860000135749 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT00940000153052.c.b.a.a.a.a.a.b ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00390000017443.s.a.a ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Rhesus MODERN SPECIES 17 SIPA1L1 (ENSMMUG00000020067) RGS6 (ENSMMUG00000001820) #7 DPF3 (ENSMMUG00000016351) #8 ENSMMUG00000063538 DCAF4 (ENSMMUG00000003625) #9 ZFYVE1 (ENSMMUG00000005140) #10 ENSMMUG00000056507 RBM25 (ENSMMUG00000002332) #12 PSEN1 (ENSMMUG00000010173) #13 PAPLN (ENSMMUG00000020195) #14 NUMB (ENSMMUG00000020196) #15 RIOX1 (ENSMMUG00000000315) #16 ENSMMUG00000053481 ENSMMUG00000049894 ENSMMUG00000006855 #21 DNAL1 (ENSMMUG00000004910) #22 PNMA1 (ENSMMUG00000004911) #23 MIDEAS (ENSMMUG00000004913) #24 PTGR2 (ENSMMUG00000018146) #26 ZNF410 (ENSMMUG00000011144) #27 FAM161B (ENSMMUG00000029273) #28 COQ6 (ENSMMUG00000011148) #29 BBOF1 (ENSMMUG00000012683) #31 ALDH6A1 (ENSMMUG00000012684) #32 LIN52 (ENSMMUG00000052506) #33 VSX2 (ENSMMUG00000029272) #34 ABCD4 (ENSMMUG00000004041) #35 VRTN (ENSMMUG00000012383) SYNDIG1L (ENSMMUG00000038996) #36 NPC2 (ENSMMUG00000006563) #37 ISCA2 (ENSMMUG00000050430) Crab-eating macaque MODERN SPECIES 17 DPF3 (ENSMFAG00000033308) #8 ENSMFAG00000057362 DCAF4 (ENSMFAG00000037267) #9 ENSMFAG00000064227 ZFYVE1 (ENSMFAG00000037270) #10 ENSMFAG00000047560 ENSMFAG00000063025 RBM25 (ENSMFAG00000040040) #12 PSEN1 (ENSMFAG00000000113) #13 PAPLN (ENSMFAG00000021512) #14 NUMB (ENSMFAG00000046300) #15 HEATR4 (ENSMFAG00000043816) ENSMFAG00000048994 ENSMFAG00000049913 ENSMFAG00000031617 #21 DNAL1 (ENSMFAG00000035392) #22 PNMA1 (ENSMFAG00000007972) #23 ENSMFAG00000063574 MIDEAS (ENSMFAG00000034140) #24 PTGR2 (ENSMFAG00000045904) #26 ZNF410 (ENSMFAG00000000428) #27 FAM161B (ENSMFAG00000038086) #28 COQ6 (ENSMFAG00000046089) #29 ENTPD5 (ENSMFAG00000001083) #30 BBOF1 (ENSMFAG00000037820) #31 ALDH6A1 (ENSMFAG00000039673) #32 LIN52 (ENSMFAG00000062510) #33 ENSMFAG00000058590 VSX2 (ENSMFAG00000050163) #34 ENSMFAG00000050925 ABCD4 (ENSMFAG00000031273) #35 Pig-tailed macaque MODERN SPECIES 214 ENSMNEG00000033671 RGS6 (ENSMNEG00000030946) #7 ENSMNEG00000034035 DPF3 (ENSMNEG00000030722) #8 DCAF4 (ENSMNEG00000036053) #9 ZFYVE1 (ENSMNEG00000029231) #10 RBM25 (ENSMNEG00000032922) #12 PSEN1 (ENSMNEG00000037289) #13 PAPLN (ENSMNEG00000027160) #14 NUMB (ENSMNEG00000034179) #15 RIOX1 (ENSMNEG00000021421) #16 HEATR4 (ENSMNEG00000032384) ENSMNEG00000033296 #17 ACOT4 (ENSMNEG00000028485) #19 ENSMNEG00000005067 #21 DNAL1 (ENSMNEG00000034870) #22 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00900000143785 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00390000017443.s.a.a ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 Olive baboon MODERN SPECIES 17 PCNX1 (ENSPANG00000018659) ENSPANG00000049489 SIPA1L1 (ENSPANG00000010341) ENSPANG00000043598 RGS6 (ENSPANG00000006945) #7 DPF3 (ENSPANG00000018213) #8 DCAF4 (ENSPANG00000016403) #9 ENSPANG00000000607 ZFYVE1 (ENSPANG00000009729) #10 RBM25 (ENSPANG00000018212) #12 PSEN1 (ENSPANG00000006859) #13 PAPLN (ENSPANG00000009728) #14 NUMB (ENSPANG00000026174) #15 ENSPANG00000026271 #17 ENSPANG00000031897 #21 DNAL1 (ENSPANG00000015764) #22 PNMA1 (ENSPANG00000003663) #23 ENSPANG00000015765 ENSPANG00000029412 PTGR2 (ENSPANG00000015767) #26 ZNF410 (ENSPANG00000013439) #27 FAM161B (ENSPANG00000018775) #28 COQ6 (ENSPANG00000022438) #29 ENTPD5 (ENSPANG00000024304) #30 BBOF1 (ENSPANG00000009281) #31 ALDH6A1 (ENSPANG00000000641) #32 LIN52 (ENSPANG00000000642) #33 ENSPANG00000038524 VSX2 (ENSPANG00000012707) #34 ENSPANG00000042755 #35 ABCD4 (ENSPANG00000007033) #35 Cercopithecinae_d ANCESTRAL SPECIES 11 ENSGT00940000155944 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00940000153052.c.b.a.a.a.a.a.a.b.a ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00900000143785 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000164709.a.b.b.a.a.b.b.b.a.a.a.b.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00390000017443.s.a.a ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 Drill MODERN SPECIES 867 ENSMLEG00000034079 SIPA1L1 (ENSMLEG00000029565) ENSMLEG00000029596 RGS6 (ENSMLEG00000032736) #7 DPF3 (ENSMLEG00000036959) #8 DCAF4 (ENSMLEG00000040126) #9 ZFYVE1 (ENSMLEG00000035385) #10 RBM25 (ENSMLEG00000035157) #12 PSEN1 (ENSMLEG00000033881) #13 PAPLN (ENSMLEG00000037242) #14 NUMB (ENSMLEG00000023581) #15 HEATR4 (ENSMLEG00000044156) ENSMLEG00000036461 #17 ACOT4 (ENSMLEG00000029946) #19 ENSMLEG00000041143 #21 DNAL1 (ENSMLEG00000032796) #22 Sooty mangabey MODERN SPECIES 165 ENSCATG00000031050 #21 DNAL1 (ENSCATG00000031825) #22 PNMA1 (ENSCATG00000015246) #23 MIDEAS (ENSCATG00000034640) #24 PTGR2 (ENSCATG00000041307) #26 ZNF410 (ENSCATG00000041121) #27 FAM161B (ENSCATG00000044961) #28 COQ6 (ENSCATG00000017691) #29 ENTPD5 (ENSCATG00000038005) #30 BBOF1 (ENSCATG00000038044) #31 ALDH6A1 (ENSCATG00000020482) #32 ENSCATG00000008507 LIN52 (ENSCATG00000030477) #33 ENSCATG00000031234 VSX2 (ENSCATG00000042328) #34 ABCD4 (ENSCATG00000044007) #35 VRTN (ENSCATG00000016010) Hominoidea ANCESTRAL SPECIES 12 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00900000143785 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Hominidae ANCESTRAL SPECIES 14 ENSGT00940000153222.a.b.b.b.b.k.b ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00900000143785 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000011943.b ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.i #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00900000143785 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00940000164709.a.b.b.a.a.b.b.b.a.a.a.b.b ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 Gorilla MODERN SPECIES 5 ENSGGOG00000038964 SIPA1L1 (ENSGGOG00000013648) ENSGGOG00000007256 #7 ENSGGOG00000009139 #8 ENSGGOG00000022649 DCAF4 (ENSGGOG00000003815) #9 ZFYVE1 (ENSGGOG00000005166) #10 RBM25 (ENSGGOG00000002415) #12 PSEN1 (ENSGGOG00000002132) #13 PAPLN (ENSGGOG00000002134) #14 NUMB (ENSGGOG00000002141) #15 HEATR4 (ENSGGOG00000003658) ACOT2 (ENSGGOG00000015023) #17 ACOT4 (ENSGGOG00000001567) #19 ACOT6 (ENSGGOG00000014111) #21 DNAL1 (ENSGGOG00000015989) #22 PNMA1 (ENSGGOG00000006159) #23 MIDEAS (ENSGGOG00000006163) #24 ENSGGOG00000040793 PTGR2 (ENSGGOG00000015300) #26 ZNF410 (ENSGGOG00000000715) #27 FAM161B (ENSGGOG00000014345) #28 COQ6 (ENSGGOG00000014355) #29 ENTPD5 (ENSGGOG00000014368) #30 BBOF1 (ENSGGOG00000009049) #31 ALDH6A1 (ENSGGOG00000009060) #32 ENSGGOG00000022958 ENSGGOG00000038348 #33 VSX2 (ENSGGOG00000002583) #34 ABCD4 (ENSGGOG00000002587) #35 VRTN (ENSGGOG00000000437) Homo/Pan group ANCESTRAL SPECIES 11 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000011943.b ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.i #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00900000143785 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00940000164709.a.b.b.a.a.b.b.b.a.a.a.b.b ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 Pan ANCESTRAL SPECIES 8 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000011943.b ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a.i #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00900000143785 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00550000076451.a.b.a ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00940000164709.a.b.b.a.a.b.b.b.a.a.a.b.b ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 Bonobo MODERN SPECIES 5 PCNX1 (ENSPPAG00000038593) SIPA1L1 (ENSPPAG00000000429) ENSPPAG00000022724 #7 DPF3 (ENSPPAG00000037348) #8 DCAF4 (ENSPPAG00000029989) #9 ZFYVE1 (ENSPPAG00000043760) #10 RBM25 (ENSPPAG00000039402) #12 PSEN1 (ENSPPAG00000038712) #13 PAPLN (ENSPPAG00000042474) #14 NUMB (ENSPPAG00000022878) #15 HEATR4 (ENSPPAG00000018626) RIOX1 (ENSPPAG00000021453) #16 ACOT2 (ENSPPAG00000003795) #17 ACOT4 (ENSPPAG00000037580) #19 ENSPPAG00000012443 #21 DNAL1 (ENSPPAG00000038940) #22 PNMA1 (ENSPPAG00000016978) #23 MIDEAS (ENSPPAG00000043022) #24 ENSPPAG00000010721 PTGR2 (ENSPPAG00000043789) #26 ZNF410 (ENSPPAG00000038897) #27 FAM161B (ENSPPAG00000036655) #28 COQ6 (ENSPPAG00000037999) #29 ENTPD5 (ENSPPAG00000029076) #30 ENSPPAG00000028641 BBOF1 (ENSPPAG00000034088) #31 ALDH6A1 (ENSPPAG00000030111) #32 LIN52 (ENSPPAG00000029287) #33 ENSPPAG00000028020 #34 ABCD4 (ENSPPAG00000041355) #35 VRTN (ENSPPAG00000016158) Chimpanzee MODERN SPECIES 5 SIPA1L1 (ENSPTRG00000023075) RGS6 (ENSPTRG00000006504) #7 DPF3 (ENSPTRG00000030704) #8 DCAF4 (ENSPTRG00000006507) #9 ENSPTRG00000043558 ZFYVE1 (ENSPTRG00000006508) #10 RBM25 (ENSPTRG00000006509) #12 PSEN1 (ENSPTRG00000006510) #13 PAPLN (ENSPTRG00000006512) #14 NUMB (ENSPTRG00000006513) #15 ENSPTRG00000051883 HEATR4 (ENSPTRG00000006515) ACOT2 (ENSPTRG00000006516) #17 ACOT4 (ENSPTRG00000006518) #19 ACOT6 (ENSPTRG00000030702) #21 DNAL1 (ENSPTRG00000006520) #22 PNMA1 (ENSPTRG00000006521) #23 MIDEAS (ENSPTRG00000006523) #24 PTGR2 (ENSPTRG00000006524) #26 ZNF410 (ENSPTRG00000006525) #27 FAM161B (ENSPTRG00000006526) #28 COQ6 (ENSPTRG00000006527) #29 ENTPD5 (ENSPTRG00000006528) #30 ENSPTRG00000043054 BBOF1 (ENSPTRG00000006530) #31 ALDH6A1 (ENSPTRG00000006531) #32 ENSPTRG00000041719 LIN52 (ENSPTRG00000030700) #33 VSX2 (ENSPTRG00000006532) #34 ABCD4 (ENSPTRG00000006533) #35 VRTN (ENSPTRG00000030698) Human MODERN SPECIES 5 SIPA1L1 (ENSG00000197555) RGS6 (ENSG00000182732) #7 DPF3 (ENSG00000205683) #8 DCAF4 (ENSG00000119599) #9 ZFYVE1 (ENSG00000165861) #10 RBM25 (ENSG00000119707) #12 PSEN1 (ENSG00000080815) #13 PAPLN (ENSG00000100767) #14 NUMB (ENSG00000133961) #15 HEATR4 (ENSG00000187105) RIOX1 (ENSG00000170468) #16 ACOT1 (ENSG00000184227) #17 ACOT2 (ENSG00000119673) #17 ACOT4 (ENSG00000177465) #19 ACOT6 (ENSG00000205669) #21 DNAL1 (ENSG00000119661) #22 PNMA1 (ENSG00000176903) #23 MIDEAS (ENSG00000156030) #24 PTGR2 (ENSG00000140043) #26 ZNF410 (ENSG00000119725) #27 FAM161B (ENSG00000156050) #28 COQ6 (ENSG00000119723) #29 ENTPD5 (ENSG00000187097) #30 BBOF1 (ENSG00000119636) #31 ALDH6A1 (ENSG00000119711) #32 LIN52 (ENSG00000205659) #33 VSX2 (ENSG00000119614) #34 ABCD4 (ENSG00000119688) #35 VRTN (ENSG00000133980) SYNDIG1L (ENSG00000183379) #36 NPC2 (ENSG00000119655) #37 Orangutan MODERN SPECIES 5 ENSPPYG00000030046 RGS6 (ENSPPYG00000005962) #7 ENSPPYG00000005963 #8 DCAF4 (ENSPPYG00000005965) #9 ZFYVE1 (ENSPPYG00000005966) #10 RBM25 (ENSPPYG00000037322) #12 PSEN1 (ENSPPYG00000005967) #13 PAPLN (ENSPPYG00000005968) #14 NUMB (ENSPPYG00000041351) #15 HEATR4 (ENSPPYG00000005970) RIOX1 (ENSPPYG00000032048) #16 ENSPPYG00000033025 #17 ENSPPYG00000005971 #17 ACOT4 (ENSPPYG00000029617) #19 ENSPPYG00000029646 #21 DNAL1 (ENSPPYG00000005973) #22 PNMA1 (ENSPPYG00000005974) #23 MIDEAS (ENSPPYG00000005975) #24 PTGR2 (ENSPPYG00000005976) #26 ZNF410 (ENSPPYG00000037257) #27 FAM161B (ENSPPYG00000038071) #28 ENSPPYG00000005978 #29 ENTPD5 (ENSPPYG00000030358) #30 BBOF1 (ENSPPYG00000005979) #31 ALDH6A1 (ENSPPYG00000005980) #32 LIN52 (ENSPPYG00000032254) #33 VSX2 (ENSPPYG00000005982) #34 ABCD4 (ENSPPYG00000005983) #35 VRTN (ENSPPYG00000005985) SYNDIG1L (ENSPPYG00000005986) #36 ENSPPYG00000005987 #37 Gibbon MODERN SPECIES 14 ENSNLEG00000034166 NOVA1 (ENSNLEG00000033958) PRKD1 (ENSNLEG00000015603) G2E3 (ENSNLEG00000015614) ENSNLEG00000031681 SCFD1 (ENSNLEG00000015659) ENSNLEG00000028472 COCH (ENSNLEG00000015841) STRN3 (ENSNLEG00000015856) ENSNLEG00000015901 HECTD1 (ENSNLEG00000015912) HEATR5A (ENSNLEG00000015975) ENSNLEG00000027180 #17 ACOT4 (ENSNLEG00000016052) #19 ENSNLEG00000030750 #21 DNAL1 (ENSNLEG00000016062) #22 PNMA1 (ENSNLEG00000016068) #23 ENSNLEG00000033162 MIDEAS (ENSNLEG00000016069) #24 PTGR2 (ENSNLEG00000016076) #26 ZNF410 (ENSNLEG00000016090) #27 FAM161B (ENSNLEG00000016114) #28 COQ6 (ENSNLEG00000016122) #29 ENTPD5 (ENSNLEG00000016159) #30 BBOF1 (ENSNLEG00000016175) #31 ALDH6A1 (ENSNLEG00000016181) #32 LIN52 (ENSNLEG00000016207) #33 VSX2 (ENSNLEG00000016214) #34 ABCD4 (ENSNLEG00000016217) #35 SYNDIG1L (ENSNLEG00000016258) #36 ENSNLEG00000032793 Platyrrhini ANCESTRAL SPECIES 4 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b.k #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00940000160251.h.a Mas night monkey MODERN SPECIES 825 ZFYVE1 (ENSANAG00000019269) #10 ENSANAG00000021022 ENSANAG00000020515 ENSANAG00000020412 RBM25 (ENSANAG00000028295) #12 ENSANAG00000005418 ENSANAG00000036030 PSEN1 (ENSANAG00000026358) #13 PAPLN (ENSANAG00000021965) #14 NUMB (ENSANAG00000031899) #15 RIOX1 (ENSANAG00000018079) #16 HEATR4 (ENSANAG00000026083) ENSANAG00000025037 #17 ACOT4 (ENSANAG00000020773) #19 ACOT6 (ENSANAG00000011051) #21 DNAL1 (ENSANAG00000030053) #22 PNMA1 (ENSANAG00000019370) #23 MIDEAS (ENSANAG00000029623) #24 PTGR2 (ENSANAG00000037046) #26 ZNF410 (ENSANAG00000030872) #27 FAM161B (ENSANAG00000032869) #28 COQ6 (ENSANAG00000031639) #29 ENTPD5 (ENSANAG00000024903) #30 BBOF1 (ENSANAG00000023794) #31 ALDH6A1 (ENSANAG00000027801) #32 LIN52 (ENSANAG00000022775) #33 VSX2 (ENSANAG00000023147) #34 ENSANAG00000022365 #35 SYNDIG1L (ENSANAG00000024522) #36 ENSANAG00000021950 NPC2 (ENSANAG00000035008) #37 Cebidae ANCESTRAL SPECIES 3 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b.k #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Marmoset MODERN SPECIES 1 ENSCJAG00000073976 RGS6 (ENSCJAG00000014537) #7 DPF3 (ENSCJAG00000014522) #8 ENSCJAG00000014514 #9 ZFYVE1 (ENSCJAG00000014498) #10 ENSCJAG00000077374 ENSCJAG00000014441 #12 PSEN1 (ENSCJAG00000014387) #13 PAPLN (ENSCJAG00000014352) #14 NUMB (ENSCJAG00000014264) #15 ENSCJAG00000082842 RIOX1 (ENSCJAG00000042587) #16 ENSCJAG00000009908 ACOT4 (ENSCJAG00000009911) #19 ENSCJAG00000037095 #21 DNAL1 (ENSCJAG00000009922) #22 PNMA1 (ENSCJAG00000042056) #23 MIDEAS (ENSCJAG00000009935) #24 PTGR2 (ENSCJAG00000011505) #26 ENSCJAG00000085540 ZNF410 (ENSCJAG00000020308) #27 FAM161B (ENSCJAG00000020363) #28 COQ6 (ENSCJAG00000065534) #29 ENTPD5 (ENSCJAG00000020391) #30 BBOF1 (ENSCJAG00000020404) #31 ALDH6A1 (ENSCJAG00000020412) #32 LIN52 (ENSCJAG00000047702) #33 VSX2 (ENSCJAG00000020442) #34 ABCD4 (ENSCJAG00000020446) #35 ENSCJAG00000055155 ENSCJAG00000075451 Cebidae_a ANCESTRAL SPECIES 4 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546.a #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b.k #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Bolivian squirrel monkey MODERN SPECIES 52 ENSSBOG00000007314 RGS6 (ENSSBOG00000029364) #7 DPF3 (ENSSBOG00000034660) #8 DCAF4 (ENSSBOG00000033529) #9 ZFYVE1 (ENSSBOG00000024876) #10 RBM25 (ENSSBOG00000034153) #12 PSEN1 (ENSSBOG00000023450) #13 PAPLN (ENSSBOG00000025394) #14 NUMB (ENSSBOG00000033352) #15 HEATR4 (ENSSBOG00000018986) RIOX1 (ENSSBOG00000013673) #16 ENSSBOG00000034097 #17 ACOT4 (ENSSBOG00000011298) #19 ENSSBOG00000021771 #21 ENSSBOG00000022744 ENSSBOG00000025995 #22 MIDEAS (ENSSBOG00000029806) #24 PTGR2 (ENSSBOG00000026681) #26 ZNF410 (ENSSBOG00000032182) #27 ENSSBOG00000034409 #28 COQ6 (ENSSBOG00000028801) #29 ENTPD5 (ENSSBOG00000026410) #30 BBOF1 (ENSSBOG00000032274) #31 ALDH6A1 (ENSSBOG00000023484) #32 LIN52 (ENSSBOG00000034707) #33 ENSSBOG00000022778 VSX2 (ENSSBOG00000031713) #34 ABCD4 (ENSSBOG00000033353) #35 SYNDIG1L (ENSSBOG00000034851) #36 NPC2 (ENSSBOG00000023280) #37 ENSSBOG00000028294 Capuchin MODERN SPECIES 54 ENSCCAG00000021283 DPF3 (ENSCCAG00000034749) #8 DCAF4 (ENSCCAG00000033783) #9 ZFYVE1 (ENSCCAG00000031934) #10 ENSCCAG00000009724 RBM25 (ENSCCAG00000030446) #12 PSEN1 (ENSCCAG00000036998) #13 PAPLN (ENSCCAG00000032497) #14 NUMB (ENSCCAG00000029310) #15 RIOX1 (ENSCCAG00000019473) #16 HEATR4 (ENSCCAG00000024834) ENSCCAG00000026985 #17 ACOT4 (ENSCCAG00000026334) #19 ENSCCAG00000028536 ACOT6 (ENSCCAG00000030425) #21 DNAL1 (ENSCCAG00000024968) #22 PNMA1 (ENSCCAG00000015385) #23 MIDEAS (ENSCCAG00000037089) #24 PTGR2 (ENSCCAG00000033557) #26 ZNF410 (ENSCCAG00000030057) #27 FAM161B (ENSCCAG00000032037) #28 COQ6 (ENSCCAG00000032550) #29 ENTPD5 (ENSCCAG00000027798) #30 BBOF1 (ENSCCAG00000025685) #31 ALDH6A1 (ENSCCAG00000033515) #32 LIN52 (ENSCCAG00000031296) #33 VSX2 (ENSCCAG00000023324) #34 ENSCCAG00000032477 #35 VRTN (ENSCCAG00000019702) SYNDIG1L (ENSCCAG00000030697) #36 ENSCCAG00000036597 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Eulipotyphla ANCESTRAL SPECIES 363 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.b ##23 Common shrew MODERN SPECIES 5590 ACOT4 (ENSSARG00000014233) #19 ENSSARG00000014245 #21 DNAL1 (ENSSARG00000014248) #22 ENSSARG00000014264 ##23 Hedgehog MODERN SPECIES 2047 DNAL1 (ENSEEUG00000005773) #22 ENSEEUG00000005838 ##23 ENSEEUG00000005884 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Suina ANCESTRAL SPECIES 24 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Chacoan peccary MODERN SPECIES 885 SIPA1L1 (ENSCWAG00000014078) RGS6 (ENSCWAG00000014412) #7 DPF3 (ENSCWAG00000019522) #8 ENSCWAG00000019651 #9 ZFYVE1 (ENSCWAG00000019785) #10 RBM25 (ENSCWAG00000019846) #12 PSEN1 (ENSCWAG00000019883) #13 ENSCWAG00000019962 #14 NUMB (ENSCWAG00000020014) #15 HEATR4 (ENSCWAG00000020096) RIOX1 (ENSCWAG00000020138) #16 ENSCWAG00000020157 #17 ENSCWAG00000020187 #19 ENSCWAG00000020201 #19 ENSCWAG00000020210 #21 DNAL1 (ENSCWAG00000020227) #22 PNMA1 (ENSCWAG00000020295) #23 MIDEAS (ENSCWAG00000020304) #24 PTGR2 (ENSCWAG00000020361) #26 ZNF410 (ENSCWAG00000020396) #27 FAM161B (ENSCWAG00000020474) #28 COQ6 (ENSCWAG00000020500) #29 ENTPD5 (ENSCWAG00000020536) #30 BBOF1 (ENSCWAG00000020575) #31 ALDH6A1 (ENSCWAG00000020593) #32 LIN52 (ENSCWAG00000020608) #33 VSX2 (ENSCWAG00000020616) #34 ABCD4 (ENSCWAG00000020632) #35 VRTN (ENSCWAG00000020682) SYNDIG1L (ENSCWAG00000020686) #36 NPC2 (ENSCWAG00000020691) #37 Pig MODERN SPECIES 15 SIPA1L1 (ENSSSCG00000002332) RGS6 (ENSSSCG00000033093) #7 DPF3 (ENSSSCG00000002333) #8 ENSSSCG00000028159 #9 ZFYVE1 (ENSSSCG00000002337) #10 RBM25 (ENSSSCG00000028663) #12 PSEN1 (ENSSSCG00000002340) #13 PAPLN (ENSSSCG00000002341) #14 NUMB (ENSSSCG00000022178) #15 ENSSSCG00000021676 RIOX1 (ENSSSCG00000002344) #16 ENSSSCG00000062678 #17 ENSSSCG00000056471 #19 ENSSSCG00000002349 #19 ACOT6 (ENSSSCG00000002348) #21 DNAL1 (ENSSSCG00000039469) #22 PNMA1 (ENSSSCG00000062320) #23 MIDEAS (ENSSSCG00000002350) #24 PTGR2 (ENSSSCG00000002351) #26 ZNF410 (ENSSSCG00000002352) #27 FAM161B (ENSSSCG00000002353) #28 COQ6 (ENSSSCG00000002354) #29 ENTPD5 (ENSSSCG00000002355) #30 BBOF1 (ENSSSCG00000002356) #31 ALDH6A1 (ENSSSCG00000002357) #32 LIN52 (ENSSSCG00000055314) #33 VSX2 (ENSSSCG00000002363) #34 ABCD4 (ENSSSCG00000038231) #35 VRTN (ENSSSCG00000002361) SYNDIG1L (ENSSSCG00000025000) #36 NPC2 (ENSSSCG00000002366) #37 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Camelidae ANCESTRAL SPECIES 8 ENSGT00940000155944 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Arabian camel MODERN SPECIES 32 MAP3K9 (ENSCDRG00005004539) PCNX1 (ENSCDRG00005004677) SIPA1L1 (ENSCDRG00005005026) RGS6 (ENSCDRG00005005336) #7 ENSCDRG00005005948 DPF3 (ENSCDRG00005005965) #8 ENSCDRG00005006011 #9 ZFYVE1 (ENSCDRG00005006074) #10 RBM25 (ENSCDRG00005006176) #12 PSEN1 (ENSCDRG00005006235) #13 PAPLN (ENSCDRG00005006429) #14 NUMB (ENSCDRG00005006647) #15 HEATR4 (ENSCDRG00005007067) RIOX1 (ENSCDRG00005007193) #16 ENSCDRG00005007214 #17 DNAL1 (ENSCDRG00005007353) #22 PNMA1 (ENSCDRG00005007500) #23 MIDEAS (ENSCDRG00005007531) #24 PTGR2 (ENSCDRG00005007915) #26 ZNF410 (ENSCDRG00005008036) #27 FAM161B (ENSCDRG00005008454) #28 COQ6 (ENSCDRG00005008512) #29 ENTPD5 (ENSCDRG00005008760) #30 BBOF1 (ENSCDRG00005008989) #31 ALDH6A1 (ENSCDRG00005000113) #32 LIN52 (ENSCDRG00005000203) #33 VSX2 (ENSCDRG00005000228) #34 ABCD4 (ENSCDRG00005000282) #35 VRTN (ENSCDRG00005000338) SYNDIG1L (ENSCDRG00005000359) #36 NPC2 (ENSCDRG00005000375) #37 Alpaca MODERN SPECIES 2815 ENSVPAG00000008305 #21 DNAL1 (ENSVPAG00000008306) #22 ENSVPAG00000008307 #23 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Cetacea ANCESTRAL SPECIES 2 ENSGT00940000155944 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223.p #37 Odontoceti ANCESTRAL SPECIES 2 ENSGT00940000155944 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000008092.a.k.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00940000155944 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019.w.a #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000008092.a.k.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Dolphin MODERN SPECIES 5165 DNAL1 (ENSTTRG00000003486) #22 PNMA1 (ENSTTRG00000003489) #23 MIDEAS (ENSTTRG00000003490) #24 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019.w.a #12 ENSGT00390000011748.f.a.a.b ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000008092.a.k.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Vaquita MODERN SPECIES 11 RGS6 (ENSPSNG00000011020) #7 ENSPSNG00000012992 DPF3 (ENSPSNG00000013076) #8 ENSPSNG00000013330 #9 ZFYVE1 (ENSPSNG00000013598) #10 RBM25 (ENSPSNG00000013760) #12 ENSPSNG00000013848 PSEN1 (ENSPSNG00000013932) #13 PAPLN (ENSPSNG00000014220) #14 NUMB (ENSPSNG00000015416) #15 ENSPSNG00000015683 RIOX1 (ENSPSNG00000015840) #16 ENSPSNG00000015880 #17 ACOT4 (ENSPSNG00000015972) #19 ENSPSNG00000016028 #21 DNAL1 (ENSPSNG00000016080) #22 PNMA1 (ENSPSNG00000016212) #23 MIDEAS (ENSPSNG00000016252) #24 ENSPSNG00000016323 ENSPSNG00000016386 #26 ZNF410 (ENSPSNG00000016492) #27 FAM161B (ENSPSNG00000016683) #28 COQ6 (ENSPSNG00000016733) #29 ENTPD5 (ENSPSNG00000016874) #30 BBOF1 (ENSPSNG00000016939) #31 ENSPSNG00000017159 ALDH6A1 (ENSPSNG00000017217) #32 LIN52 (ENSPSNG00000017321) #33 VSX2 (ENSPSNG00000017375) #34 ABCD4 (ENSPSNG00000017443) #35 VRTN (ENSPSNG00000017561) Monodontidae ANCESTRAL SPECIES 5 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019.w.a #12 ENSGT00390000011748.f.a.a.b ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00390000008092.a.k.b ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Beluga whale MODERN SPECIES 24 ENSDLEG00000004911 #12 ENSDLEG00000004905 ENSDLEG00000004900 PSEN1 (ENSDLEG00000004888) #13 PAPLN (ENSDLEG00000004848) #14 NUMB (ENSDLEG00000004818) #15 RIOX1 (ENSDLEG00000004808) #16 ENSDLEG00000004797 ENSDLEG00000004791 #17 ACOT6 (ENSDLEG00000004777) #21 DNAL1 (ENSDLEG00000004767) #22 PNMA1 (ENSDLEG00000004762) #23 ELMSAN1 (ENSDLEG00000004742) #24 PTGR2 (ENSDLEG00000004727) #26 ENSDLEG00000004722 #27 FAM161B (ENSDLEG00000004716) #28 COQ6 (ENSDLEG00000004706) #29 ENTPD5 (ENSDLEG00000004699) #30 ENSDLEG00000004696 BBOF1 (ENSDLEG00000004689) #31 ALDH6A1 (ENSDLEG00000004681) #32 LIN52 (ENSDLEG00000004674) #33 ENSDLEG00000004670 VSX2 (ENSDLEG00000004663) #34 ABCD4 (ENSDLEG00000004639) #35 VRTN (ENSDLEG00000004633) Narwhal MODERN SPECIES 308 RGS6 (ENSMMNG00015014949) #7 ENSMMNG00015015067 DPF3 (ENSMMNG00015015087) #8 ENSMMNG00015015140 #9 ZFYVE1 (ENSMMNG00015015194) #10 ENSMMNG00015015230 #12 ENSMMNG00015015284 PSEN1 (ENSMMNG00015015312) #13 PAPLN (ENSMMNG00015015359) #14 NUMB (ENSMMNG00015015419) #15 ENSMMNG00015015468 RIOX1 (ENSMMNG00015015480) #16 ENSMMNG00015015493 #17 ACOT4 (ENSMMNG00015015501) #19 ENSMMNG00015015508 #21 DNAL1 (ENSMMNG00015015521) #22 PNMA1 (ENSMMNG00015015536) #23 MIDEAS (ENSMMNG00015015547) #24 PTGR2 (ENSMMNG00015015571) #26 ZNF410 (ENSMMNG00015015646) #27 FAM161B (ENSMMNG00015015710) #28 COQ6 (ENSMMNG00015015740) #29 ENTPD5 (ENSMMNG00015015799) #30 BBOF1 (ENSMMNG00015015862) #31 ENSMMNG00015015913 ALDH6A1 (ENSMMNG00015015950) #32 LIN52 (ENSMMNG00015015990) #33 VSX2 (ENSMMNG00015016032) #34 ABCD4 (ENSMMNG00015016106) #35 VRTN (ENSMMNG00015016199) SYNDIG1L (ENSMMNG00015016210) #36 Sperm whale MODERN SPECIES 2 PCNX1 (ENSPCTG00005003741) SIPA1L1 (ENSPCTG00005005182) RGS6 (ENSPCTG00005008714) #7 DPF3 (ENSPCTG00005014656) #8 ENSPCTG00005015279 #9 ZFYVE1 (ENSPCTG00005015653) #10 RBM25 (ENSPCTG00005015944) #12 PSEN1 (ENSPCTG00005016305) #13 PAPLN (ENSPCTG00005017592) #14 NUMB (ENSPCTG00005019456) #15 ENSPCTG00005020210 RIOX1 (ENSPCTG00005020418) #16 ENSPCTG00005020502 #17 ACOT4 (ENSPCTG00005020651) #19 ACOT6 (ENSPCTG00005020732) #21 DNAL1 (ENSPCTG00005020845) #22 PNMA1 (ENSPCTG00005021041) #23 ELMSAN1 (ENSPCTG00005021121) #24 PTGR2 (ENSPCTG00005021277) #26 ZNF410 (ENSPCTG00005021580) #27 FAM161B (ENSPCTG00005021920) #28 COQ6 (ENSPCTG00005022055) #29 ENTPD5 (ENSPCTG00005022235) #30 BBOF1 (ENSPCTG00005022417) #31 ENSPCTG00005022468 ALDH6A1 (ENSPCTG00005022500) #32 LIN52 (ENSPCTG00005022555) #33 VSX2 (ENSPCTG00005022587) #34 ABCD4 (ENSPCTG00005022592) #35 VRTN (ENSPCTG00005022596) SYNDIG1L (ENSPCTG00005022606) #36 Blue whale MODERN SPECIES 11 ENSBMSG00010005707 DPF3 (ENSBMSG00010005752) #8 ENSBMSG00010005834 #9 ZFYVE1 (ENSBMSG00010005866) #10 RBM25 (ENSBMSG00010005882) #12 ENSBMSG00010005918 PSEN1 (ENSBMSG00010005948) #13 ENSBMSG00010005988 PAPLN (ENSBMSG00010006012) #14 NUMB (ENSBMSG00010006080) #15 ENSBMSG00010006163 RIOX1 (ENSBMSG00010006198) #16 ENSBMSG00010006212 #17 ACOT4 (ENSBMSG00010006272) #19 ACOT6 (ENSBMSG00010006298) #21 DNAL1 (ENSBMSG00010006338) #22 PNMA1 (ENSBMSG00010006363) #23 MIDEAS (ENSBMSG00010006405) #24 ENSBMSG00010006484 PTGR2 (ENSBMSG00010006503) #26 ZNF410 (ENSBMSG00010006528) #27 FAM161B (ENSBMSG00010006375) #28 COQ6 (ENSBMSG00010006401) #29 ENTPD5 (ENSBMSG00010006501) #30 BBOF1 (ENSBMSG00010006525) #31 ENSBMSG00010006546 LIN52 (ENSBMSG00010006623) #33 VSX2 (ENSBMSG00010006660) #34 ABCD4 (ENSBMSG00010006684) #35 SYNDIG1L (ENSBMSG00010006725) #36 ENSBMSG00010006750 #37 Pecora ANCESTRAL SPECIES 6 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Yarkand deer MODERN SPECIES 3 PCNX1 (ENSCHYG00000017125) SIPA1L1 (ENSCHYG00000017418) ENSCHYG00000017850 RGS6 (ENSCHYG00000017945) #7 ENSCHYG00000019264 DPF3 (ENSCHYG00000019349) #8 ENSCHYG00000019600 #9 ZFYVE1 (ENSCHYG00000019875) #10 RBM25 (ENSCHYG00000020072) #12 PSEN1 (ENSCHYG00000020221) #13 PAPLN (ENSCHYG00000020768) #14 NUMB (ENSCHYG00000021106) #15 HEATR4 (ENSCHYG00000021581) RIOX1 (ENSCHYG00000021826) #16 ACOT6 (ENSCHYG00000021951) #21 DNAL1 (ENSCHYG00000022094) #22 PNMA1 (ENSCHYG00000022219) #23 MIDEAS (ENSCHYG00000022251) #24 PTGR2 (ENSCHYG00000022406) #26 ZNF410 (ENSCHYG00000022523) #27 FAM161B (ENSCHYG00000022799) #28 COQ6 (ENSCHYG00000022859) #29 ENTPD5 (ENSCHYG00000022954) #30 BBOF1 (ENSCHYG00000023091) #31 ALDH6A1 (ENSCHYG00000023203) #32 LIN52 (ENSCHYG00000023413) #33 ENSCHYG00000023471 VSX2 (ENSCHYG00000023493) #34 ABCD4 (ENSCHYG00000023537) #35 VRTN (ENSCHYG00000023697) SYNDIG1L (ENSCHYG00000023714) #36 Percora_a ANCESTRAL SPECIES 8 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b.f #19 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b.e.a #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Siberian musk deer MODERN SPECIES 260 RGS6 (ENSMMSG00000017838) #7 DPF3 (ENSMMSG00000019667) #8 ENSMMSG00000019774 #9 ZFYVE1 (ENSMMSG00000019863) #10 RBM25 (ENSMMSG00000019940) #12 PSEN1 (ENSMMSG00000019994) #13 PAPLN (ENSMMSG00000020113) #14 NUMB (ENSMMSG00000020223) #15 ENSMMSG00000020471 RIOX1 (ENSMMSG00000020569) #16 ENSMMSG00000020582 #17 ENSMMSG00000020621 #19 ENSMMSG00000020634 ENSMMSG00000020660 #19 ACOT6 (ENSMMSG00000020688) #21 DNAL1 (ENSMMSG00000020722) #22 PNMA1 (ENSMMSG00000020797) #23 MIDEAS (ENSMMSG00000020815) #24 PTGR2 (ENSMMSG00000020873) #26 ZNF410 (ENSMMSG00000020927) #27 FAM161B (ENSMMSG00000020978) #28 COQ6 (ENSMMSG00000021004) #29 ENTPD5 (ENSMMSG00000021133) #30 BBOF1 (ENSMMSG00000021217) #31 ALDH6A1 (ENSMMSG00000021323) #32 LIN52 (ENSMMSG00000021369) #33 VSX2 (ENSMMSG00000021411) #34 ABCD4 (ENSMMSG00000021448) #35 VRTN (ENSMMSG00000021493) SYNDIG1L (ENSMMSG00000021508) #36 NPC2 (ENSMMSG00000021533) #37 Bovidae DUPLICATION Bovidae DUPLICATION Bovidae ANCESTRAL SPECIES 7 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b.f #19 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b.e.a #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904.a.a #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Bovinae ANCESTRAL SPECIES 11 ENSGT00950000183198.c.b.b.d ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a.q #17 ENSGT01010000222336.a.a.a.ob.a.b.f.b #19 ENSGT01010000222336.a.a.a.ob.a.a.r #17 ENSGT01010000222336.a.a.a.ob.a.b.f.a #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904.a.a #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793.e #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Bos ANCESTRAL SPECIES 13 ENSGT01100000263480.a.a.b.b.b.a.b.a.a.a.a.b.b ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207.a ENSGT00390000000083.a #16 ENSGT00390000013207.b ENSGT01010000222336.a.a.a.ob.a.a.q #17 ENSGT01010000222336.a.a.a.ob.a.b.f.b #19 ENSGT01010000222336.a.a.a.ob.a.a.r #17 ENSGT01010000222336.a.a.a.ob.a.b.f.a #19 ENSGT01010000222336.a.a.a.ob.a.b.e.a #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904.a.a #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793.e #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Bos_a ANCESTRAL SPECIES 1 ENSGT00390000009546 #9 ENSGT01100000263480.a.a.b.b.b.a.b.a.a.a.a.b.b ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207.a ENSGT00390000000083.a #16 ENSGT00390000013207.b ENSGT01010000222336.a.a.a.ob.a.a.q #17 ENSGT01010000222336.a.a.a.ob.a.b.f.b #19 ENSGT01010000222336.a.a.a.ob.a.a.r #17 ENSGT01010000222336.a.a.a.ob.a.b.f.a #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904.a.a #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793.e #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Domestic yak MODERN SPECIES 2 ENSBGRG00000014589 ZFYVE1 (ENSBGRG00000014619) #10 RBM25 (ENSBGRG00000014814) #12 ENSBGRG00000014962 PSEN1 (ENSBGRG00000015004) #13 PAPLN (ENSBGRG00000015385) #14 NUMB (ENSBGRG00000016469) #15 ENSBGRG00000016829 RIOX1 (ENSBGRG00000016972) #16 ENSBGRG00000017051 ENSBGRG00000017115 #17 ACOT6 (ENSBGRG00000017306) #21 ENSBGRG00000017382 ENSBGRG00000017419 ENSBGRG00000017483 ENSBGRG00000017562 #22 PNMA1 (ENSBGRG00000017709) #23 MIDEAS (ENSBGRG00000017732) #24 ENSBGRG00000018082 #26 ZNF410 (ENSBGRG00000018207) #27 FAM161B (ENSBGRG00000018523) #28 COQ6 (ENSBGRG00000018611) #29 ENTPD5 (ENSBGRG00000005910) #30 BBOF1 (ENSBGRG00000005994) #31 ALDH6A1 (ENSBGRG00000006095) #32 LIN52 (ENSBGRG00000006226) #33 VSX2 (ENSBGRG00000006307) #34 ABCD4 (ENSBGRG00000006381) #35 VRTN (ENSBGRG00000006578) SYNDIG1L (ENSBGRG00000006594) #36 NPC2 (ENSBGRG00000006618) #37 Wild yak MODERN SPECIES 605 DPF3 (ENSBMUG00000009879) #8 ENSBMUG00000009848 #9 ZFYVE1 (ENSBMUG00000009820) #10 RBM25 (ENSBMUG00000009795) #12 PSEN1 (ENSBMUG00000009750) #13 PAPLN (ENSBMUG00000009643) #14 NUMB (ENSBMUG00000009175) #15 RIOX1 (ENSBMUG00000008961) #16 ENSBMUG00000008951 ENSBMUG00000008918 #17 ENSBMUG00000008907 #19 ENSBMUG00000008887 #17 ENSBMUG00000008879 #19 ENSBMUG00000008872 #21 ENSBMUG00000008866 DNAL1 (ENSBMUG00000008848) #22 PNMA1 (ENSBMUG00000008814) #23 MIDEAS (ENSBMUG00000008801) #24 PTGR2 (ENSBMUG00000008747) #26 ZNF410 (ENSBMUG00000008634) #27 FAM161B (ENSBMUG00000008593) #28 COQ6 (ENSBMUG00000008582) #29 ENTPD5 (ENSBMUG00000008565) #30 BBOF1 (ENSBMUG00000008532) #31 ALDH6A1 (ENSBMUG00000008513) #32 LIN52 (ENSBMUG00000008498) #33 American bison MODERN SPECIES 3282 RGS6 (ENSBBBG00000013128) #7 ENSBBBG00000013152 DPF3 (ENSBBBG00000013175) #8 ENSBBBG00000002672 #9 ZFYVE1 (ENSBBBG00000013262) #10 RBM25 (ENSBBBG00000002704) #12 PSEN1 (ENSBBBG00000001581) #13 PAPLN (ENSBBBG00000002766) #14 NUMB (ENSBBBG00000002909) #15 ENSBBBG00000002932 ENSBBBG00000013743 #17 ENSBBBG00000007896 #19 ENSBBBG00000002936 #17 ENSBBBG00000013752 #19 ACOT6 (ENSBBBG00000013759) #21 DNAL1 (ENSBBBG00000013792) #22 PNMA1 (ENSBBBG00000013798) #23 MIDEAS (ENSBBBG00000013823) #24 PTGR2 (ENSBBBG00000002974) #26 ZNF410 (ENSBBBG00000003035) #27 FAM161B (ENSBBBG00000013948) #28 COQ6 (ENSBBBG00000003060) #29 ENTPD5 (ENSBBBG00000013986) #30 BBOF1 (ENSBBBG00000003080) #31 ALDH6A1 (ENSBBBG00000003099) #32 LIN52 (ENSBBBG00000003104) #33 VSX2 (ENSBBBG00000014020) #34 ABCD4 (ENSBBBG00000003123) #35 VRTN (ENSBBBG00000003129) SYNDIG1L (ENSBBBG00000014055) #36 NPC2 (ENSBBBG00000014061) #37 Caprinae ANCESTRAL SPECIES 11 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.a.b.e.b #19 ENSGT01010000222336.a.a.a.ob.a.b.e.a #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904.a.a #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Goat MODERN SPECIES 1 ENSCHIG00000021905 #12 ENSCHIG00000010764 ENSCHIG00000021190 #12 PSEN1 (ENSCHIG00000025284) #13 PAPLN (ENSCHIG00000018573) #14 ENSCHIG00000023603 NUMB (ENSCHIG00000017411) #15 RIOX1 (ENSCHIG00000024709) #16 ENSCHIG00000013624 #17 ENSCHIG00000022908 ENSCHIG00000008334 #19 HEATR4 (ENSCHIG00000016869) ENSCHIG00000026395 ENSCHIG00000015407 #19 ENSCHIG00000025534 #21 ENSCHIG00000012677 #22 PNMA1 (ENSCHIG00000005409) #23 MIDEAS (ENSCHIG00000025351) #24 PTGR2 (ENSCHIG00000018563) #26 ZNF410 (ENSCHIG00000002289) #27 FAM161B (ENSCHIG00000018206) #28 COQ6 (ENSCHIG00000000785) #29 ENTPD5 (ENSCHIG00000026804) #30 BBOF1 (ENSCHIG00000009138) #31 ALDH6A1 (ENSCHIG00000011927) #32 LIN52 (ENSCHIG00000024176) #33 VSX2 (ENSCHIG00000015233) #34 ABCD4 (ENSCHIG00000017269) #35 VRTN (ENSCHIG00000022707) SYNDIG1L (ENSCHIG00000019047) #36 NPC2 (ENSCHIG00000019346) #37 Bovidae ANCESTRAL SPECIES 16 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A.qc.a ENSGT00810000125439.A.rc ENSGT00940000155692 ENSGT00940000155891 ENSGT00390000005623 ENSGT00940000155755 ENSGT00390000007067.c ENSGT00660000097475 ENSGT00390000013180 ENSGT00940000156251.f.e.a ENSGT00940000156251.f.f ENSGT00940000156251.e ENSGT00950000182988.a.b.a ENSGT00390000016904.a.b #22 ENSGT00530000063816.c ENSGT00390000010063 ENSGT00540000070023.c.b.a.a.a.a ENSGT00530000064411 ENSGT00390000011958 ENSGT00390000010128 ENSGT00940000160762 ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000153733.A ENSGT00390000005673 ENSGT00940000160906 ENSGT00940000160942 ENSGT00940000157792 ENSGT01030000234618.D Caprinae ANCESTRAL SPECIES 29 ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A.qc.a ENSGT00940000155692 ENSGT00940000155891 ENSGT00390000005623 ENSGT00940000155755 ENSGT00390000007067.c ENSGT00660000097475 ENSGT00390000013180 ENSGT00940000156251.f.e.a ENSGT00940000156251.f.f ENSGT00940000156251.e ENSGT00950000182988.a.b.a ENSGT00390000016904.a.b #22 ENSGT00530000063816.c ENSGT00390000010063 ENSGT00540000070023.c.b.a.a.a.a ENSGT00530000064411 ENSGT00390000011958 ENSGT00390000010128 ENSGT00940000160762 ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000153733.A ENSGT00390000005673 ENSGT00940000160906 ENSGT00940000160942 ENSGT00940000157792 ENSGT01030000234618.D Goat MODERN SPECIES 21 PRMT3 (ENSCHIG00000016465) SLC6A5 (ENSCHIG00000012442) NELL1 (ENSCHIG00000022956) ANO5 (ENSCHIG00000009295) SLC17A6 (ENSCHIG00000018728) FANCF (ENSCHIG00000007412) GAS2 (ENSCHIG00000024172) SVIP (ENSCHIG00000018647) ENSCHIG00000012126 ENSCHIG00000026019 ENSCHIG00000018981 ENSCHIG00000011542 ENSCHIG00000012289 ENSCHIG00000012938 PAK1 (ENSCHIG00000003071) ENSCHIG00000020809 #22 ENSCHIG00000008822 AQP11 (ENSCHIG00000013621) CLNS1A (ENSCHIG00000022408) ENSCHIG00000014742 RSF1 (ENSCHIG00000024983) AAMDC (ENSCHIG00000016553) INTS4 (ENSCHIG00000016677) KCTD14 (ENSCHIG00000010510) THRSP (ENSCHIG00000010391) NDUFC2 (ENSCHIG00000024981) ALG8 (ENSCHIG00000015388) ENSCHIG00000012136 KCTD21 (ENSCHIG00000010283) USP35 (ENSCHIG00000022000) GAB2 (ENSCHIG00000017530) Rambouillet Sheep MODERN SPECIES 13 DBX1 (ENSOARG00020025685) ENSOARG00020025682 ENSOARG00020025676 ENSOARG00020025672 HTATIP2 (ENSOARG00020025666) PRMT3 (ENSOARG00020025645) SLC6A5 (ENSOARG00020025638) NELL1 (ENSOARG00020025588) ENSOARG00020025569 ENSOARG00020025562 LUZP2 (ENSOARG00020025537) ENSOARG00020025509 ENSOARG00020025490 ENSOARG00020025417 PAK1 (ENSOARG00020025388) ENSOARG00020025384 #22 AQP11 (ENSOARG00020025375) CLNS1A (ENSOARG00020025356) ENSOARG00020025348 RSF1 (ENSOARG00020025337) AAMDC (ENSOARG00020025329) INTS4 (ENSOARG00020025265) KCTD14 (ENSOARG00020025241) THRSP (ENSOARG00020025234) NDUFC2 (ENSOARG00020025217) ALG8 (ENSOARG00020025204) ENSOARG00020025198 ENSOARG00020025186 KCTD21 (ENSOARG00020025178) USP35 (ENSOARG00020025158) ENSOARG00020025150 Bovinae ANCESTRAL SPECIES 27 ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A.qc.a ENSGT00810000125439.A.rc ENSGT00940000155692 ENSGT00940000155891 ENSGT00390000005623 ENSGT00940000155755 ENSGT00390000007067.c ENSGT00660000097475 ENSGT00390000013180 ENSGT00940000156251.f.f ENSGT00940000156251.e ENSGT00950000182988.a.b.a ENSGT00390000016904.a.b #22 ENSGT00530000063816.c ENSGT00390000010063 ENSGT00540000070023.c.b.a.a.a.a ENSGT00530000064411 ENSGT00390000011958 ENSGT00390000010128 ENSGT00940000160762 ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000153733.A ENSGT00390000005673 ENSGT00940000160906 ENSGT00390000002918.a.a.j.c.a ENSGT00940000160942 ENSGT00940000157792 Bos ANCESTRAL SPECIES 11 ENSGT00940000154963 ENSGT00810000125439.A.qc.a ENSGT00810000125439.A.rc ENSGT00940000155692 ENSGT00940000155891 ENSGT00390000005623 ENSGT00940000155755.e.a ENSGT00940000155755.f ENSGT00390000007067.c ENSGT00660000097475 ENSGT00390000013180 ENSGT00390000007015.q.b ENSGT00940000156251.f.f ENSGT00940000156251.e ENSGT00950000182988.a.b.a ENSGT00390000016904.a.b #22 ENSGT00530000063816.c ENSGT00390000010063 ENSGT00530000064411 ENSGT00390000011958 ENSGT00390000010128 ENSGT00940000160762 ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000153733.A ENSGT00390000005673 ENSGT00940000160906 ENSGT00390000002918.a.a.j.c.a.a.a ENSGT00940000160942 ENSGT00940000157792 ENSGT01030000234618.D Bos_a ANCESTRAL SPECIES 66 ENSGT00390000007015.q.b ENSGT00940000156251.f.f ENSGT00940000156251.e ENSGT00950000182988.a.b.a ENSGT00390000016904.a.b #22 ENSGT00530000063816.c ENSGT00390000010063 ENSGT00530000064411 ENSGT00540000070023.c.b.a.a.a.a ENSGT00390000011958 ENSGT00390000010128 ENSGT00940000160762 ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000153733.A ENSGT00940000160906 ENSGT00940000160942 ENSGT00940000157792 ENSGT01030000234618.D ENSGT00740000117054 Domestic yak MODERN SPECIES 21 ENSBGRG00000024323 OR10G6 (ENSBGRG00000024329) OR10S1 (ENSBGRG00000024345) ENSBGRG00000024364 ENSBGRG00000024380 OR8D4 (ENSBGRG00000017223) ENSBGRG00000017237 ENSBGRG00000017300 ENSBGRG00000017317 ENSBGRG00000017480 ENSBGRG00000017635 ENSBGRG00000017741 ENSBGRG00000017769 ENSBGRG00000018068 PAK1 (ENSBGRG00000018531) ENSBGRG00000018633 #22 AQP11 (ENSBGRG00000018686) CLNS1A (ENSBGRG00000018759) RSF1 (ENSBGRG00000019124) ENSBGRG00000019411 AAMDC (ENSBGRG00000019457) INTS4 (ENSBGRG00000019630) KCTD14 (ENSBGRG00000020044) THRSP (ENSBGRG00000020064) NDUFC2 (ENSBGRG00000020103) ALG8 (ENSBGRG00000020232) KCTD21 (ENSBGRG00000020357) USP35 (ENSBGRG00000020391) ENSBGRG00000020442 GAB2 (ENSBGRG00000020464) NARS2 (ENSBGRG00000020539) Bos_b ANCESTRAL SPECIES 10 ENSGT00940000154963 ENSGT00810000125439.A.qc.a ENSGT00810000125439.A.rc ENSGT00940000155692 ENSGT00940000155891 ENSGT00390000005623 ENSGT00940000155755.f ENSGT00390000007067.c ENSGT00660000097475 ENSGT00970000198347 ENSGT00390000013180 ENSGT00390000007015.q.b ENSGT00940000156251.f.f ENSGT00940000156251.e ENSGT00950000182988.a.b.a ENSGT00390000016904.a.b #22 ENSGT00530000063816.c ENSGT00390000010063 ENSGT00530000064411 ENSGT00390000011958 ENSGT00390000010128 ENSGT00940000160762 ENSGT00500000044890.a.b ENSGT00390000010352 ENSGT00940000153733.A ENSGT00390000005673 ENSGT00940000160906 ENSGT00390000002918.a.a.j.c.a.a.a ENSGT00940000160942 ENSGT00940000157792 ENSGT01030000234618.D Hybrid Bos Indicus MODERN SPECIES 21 PRMT3 (ENSBIXG00005022211) SLC6A5 (ENSBIXG00005006663) NELL1 (ENSBIXG00005021911) ANO5 (ENSBIXG00005021754) SLC17A6 (ENSBIXG00005021666) FANCF (ENSBIXG00005021632) GAS2 (ENSBIXG00005021605) ENSBIXG00005000008 CCDC179 (ENSBIXG00005021565) ENSBIXG00005006604 LUZP2 (ENSBIXG00005003622) ENSBIXG00005021330 ENSBIXG00005021308 ENSBIXG00005021277 PAK1 (ENSBIXG00005021064) ENSBIXG00005021010 #22 AQP11 (ENSBIXG00005020997) CLNS1A (ENSBIXG00005020933) RSF1 (ENSBIXG00005003521) ENSBIXG00005020733 ENSBIXG00005007728 AAMDC (ENSBIXG00005020691) INTS4 (ENSBIXG00005020611) KCTD14 (ENSBIXG00005020393) ENSBIXG00005020379 THRSP (ENSBIXG00005020366) ALG8 (ENSBIXG00005020344) ENSBIXG00005007674 KCTD21 (ENSBIXG00005007835) ENSBIXG00005003394 USP35 (ENSBIXG00005020250) Bovidae ANCESTRAL SPECIES ENSGT00390000016904.b #22 Caprinae ANCESTRAL SPECIES ENSGT00390000016904.b #22 Rambouillet Sheep MODERN SPECIES 23 DCAF4 (ENSOARG00020010137) #9 ZFYVE1 (ENSOARG00020010565) #10 RBM25 (ENSOARG00020011125) #12 ENSOARG00020011255 PSEN1 (ENSOARG00020011326) #13 PAPLN (ENSOARG00020011520) #14 NUMB (ENSOARG00020011742) #15 ENSOARG00020012105 RIOX1 (ENSOARG00020012228) #16 ENSOARG00020012249 #17 ENSOARG00020012308 #19 ENSOARG00020012357 #17 ENSOARG00020012431 #19 ACOT6 (ENSOARG00020012471) #21 ENSOARG00020012528 ENSOARG00020012555 #22 PNMA1 (ENSOARG00020012650) #23 MIDEAS (ENSOARG00020012681) #24 PTGR2 (ENSOARG00020012884) #26 ZNF410 (ENSOARG00020013087) #27 FAM161B (ENSOARG00020013369) #28 COQ6 (ENSOARG00020013490) #29 ENTPD5 (ENSOARG00020013612) #30 BBOF1 (ENSOARG00020013850) #31 ALDH6A1 (ENSOARG00020014015) #32 LIN52 (ENSOARG00020014138) #33 VSX2 (ENSOARG00020014208) #34 ABCD4 (ENSOARG00020014282) #35 VRTN (ENSOARG00020014385) SYNDIG1L (ENSOARG00020014401) #36 NPC2 (ENSOARG00020014455) #37 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Chiroptera ANCESTRAL SPECIES 15 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Microchiroptera ANCESTRAL SPECIES 19 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Greater horseshoe bat MODERN SPECIES 24 ENSRFEG00010004252 SIPA1L1 (ENSRFEG00010004221) RGS6 (ENSRFEG00010003911) #7 DPF3 (ENSRFEG00010003693) #8 ENSRFEG00010003634 #9 ZFYVE1 (ENSRFEG00010003575) #10 ENSRFEG00010003540 RBM25 (ENSRFEG00010003517) #12 PSEN1 (ENSRFEG00010003436) #13 PAPLN (ENSRFEG00010003382) #14 NUMB (ENSRFEG00010003279) #15 RIOX1 (ENSRFEG00010003255) #16 HEATR4 (ENSRFEG00010003232) ACOT4 (ENSRFEG00010003211) #19 ENSRFEG00010003184 #17 DNAL1 (ENSRFEG00010003125) #22 PNMA1 (ENSRFEG00010003104) #23 MIDEAS (ENSRFEG00010003038) #24 ENSRFEG00010002979 PTGR2 (ENSRFEG00010002957) #26 ENSRFEG00010002938 ZNF410 (ENSRFEG00010002841) #27 FAM161B (ENSRFEG00010002768) #28 COQ6 (ENSRFEG00010002723) #29 ENTPD5 (ENSRFEG00010002649) #30 BBOF1 (ENSRFEG00010002580) #31 ALDH6A1 (ENSRFEG00010002445) #32 LIN52 (ENSRFEG00010002408) #33 VSX2 (ENSRFEG00010002363) #34 ABCD4 (ENSRFEG00010002301) #35 VRTN (ENSRFEG00010002267) Microbat MODERN SPECIES 1144 RGS6 (ENSMLUG00000009389) #7 DPF3 (ENSMLUG00000002257) #8 ENSMLUG00000000420 #9 ZFYVE1 (ENSMLUG00000000426) #10 ENSMLUG00000015434 #12 PSEN1 (ENSMLUG00000015451) #13 PAPLN (ENSMLUG00000022377) #14 NUMB (ENSMLUG00000015460) #15 HEATR4 (ENSMLUG00000016648) RIOX1 (ENSMLUG00000025072) #16 ENSMLUG00000016666 #17 ENSMLUG00000026578 ACOT4 (ENSMLUG00000016671) #19 ACOT6 (ENSMLUG00000029850) #21 ENSMLUG00000029237 ##17 DNAL1 (ENSMLUG00000004830) #22 ENSMLUG00000004833 ##23 MIDEAS (ENSMLUG00000004835) #24 PTGR2 (ENSMLUG00000024299) #26 ZNF410 (ENSMLUG00000008658) #27 FAM161B (ENSMLUG00000008688) #28 COQ6 (ENSMLUG00000008704) #29 ENTPD5 (ENSMLUG00000008730) #30 BBOF1 (ENSMLUG00000017010) #31 ALDH6A1 (ENSMLUG00000010050) #32 LIN52 (ENSMLUG00000010074) #33 Megabat MODERN SPECIES 2500 ENSPVAG00000009041 #19 ENSPVAG00000009046 #21 DNAL1 (ENSPVAG00000009047) #22 PNMA1 (ENSPVAG00000009050) #23 MIDEAS (ENSPVAG00000009051) #24 Equus ANCESTRAL SPECIES 17 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Horse MODERN SPECIES 16 DPF3 (ENSECAG00000024660) #8 ENSECAG00000053109 ENSECAG00000015480 #9 ZFYVE1 (ENSECAG00000023029) #10 RBM25 (ENSECAG00000013395) #12 PSEN1 (ENSECAG00000004387) #13 PAPLN (ENSECAG00000007861) #14 NUMB (ENSECAG00000016684) #15 HEATR4 (ENSECAG00000009392) RIOX1 (ENSECAG00000056153) #16 ENSECAG00000033024 #17 ENSECAG00000049659 #17 ENSECAG00000051326 #17 ACOT4 (ENSECAG00000009756) #19 ACOT6 (ENSECAG00000016290) #21 DNAL1 (ENSECAG00000033122) #22 PNMA1 (ENSECAG00000004251) #23 MIDEAS (ENSECAG00000005161) #24 PTGR2 (ENSECAG00000013284) #26 ZNF410 (ENSECAG00000014531) #27 FAM161B (ENSECAG00000021896) #28 COQ6 (ENSECAG00000051009) #29 ENTPD5 (ENSECAG00000013212) #30 BBOF1 (ENSECAG00000005420) #31 ENSECAG00000058911 ENSECAG00000057994 ALDH6A1 (ENSECAG00000009453) #32 LIN52 (ENSECAG00000022953) #33 ENSECAG00000048527 VSX2 (ENSECAG00000023780) #34 ABCD4 (ENSECAG00000000282) #35 Donkey MODERN SPECIES 27 RGS6 (ENSEASG00005004707) #7 DPF3 (ENSEASG00005004725) #8 ENSEASG00005004728 #9 ZFYVE1 (ENSEASG00005004734) #10 RBM25 (ENSEASG00005004739) #12 PSEN1 (ENSEASG00005004749) #13 PAPLN (ENSEASG00005004755) #14 NUMB (ENSEASG00005004756) #15 HEATR4 (ENSEASG00005004763) ENSEASG00005035022 #17 ENSEASG00005011607 #19 ENSEASG00005026716 #17 ENSEASG00005036740 #17 ENSEASG00005033187 #19 ENSEASG00005037069 #21 DNAL1 (ENSEASG00005011612) #22 PNMA1 (ENSEASG00005011614) #23 MIDEAS (ENSEASG00005011617) #24 PTGR2 (ENSEASG00005011622) #26 ZNF410 (ENSEASG00005011626) #27 FAM161B (ENSEASG00005011633) #28 COQ6 (ENSEASG00005011638) #29 ENTPD5 (ENSEASG00005011645) #30 BBOF1 (ENSEASG00005011653) #31 ALDH6A1 (ENSEASG00005011664) #32 LIN52 (ENSEASG00005031315) #33 VSX2 (ENSEASG00005011673) #34 ABCD4 (ENSEASG00005011677) #35 VRTN (ENSEASG00005011680) SYNDIG1L (ENSEASG00005011683) #36 NPC2 (ENSEASG00005023991) #37 Carnivora ANCESTRAL SPECIES ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Felidae ANCESTRAL SPECIES 1 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000004322.a.b.j.f.b ENSGT00390000007874 ENSGT00950000183147.A.a #36 Cat MODERN SPECIES 237 SIPA1L1 (ENSFCAG00000007022) RGS6 (ENSFCAG00000014028) #7 ENSFCAG00000028177 DPF3 (ENSFCAG00000014694) #8 ENSFCAG00000051527 ENSFCAG00000014698 #9 ZFYVE1 (ENSFCAG00000014703) #10 RBM25 (ENSFCAG00000011716) #12 PSEN1 (ENSFCAG00000028093) #13 PAPLN (ENSFCAG00000011718) #14 NUMB (ENSFCAG00000026244) #15 HEATR4 (ENSFCAG00000008136) RIOX1 (ENSFCAG00000042968) #16 ENSFCAG00000037046 ##17 ENSFCAG00000034073 #21 DNAL1 (ENSFCAG00000031313) #22 PNMA1 (ENSFCAG00000012218) #23 MIDEAS (ENSFCAG00000012220) #24 PTGR2 (ENSFCAG00000024703) #26 ZNF410 (ENSFCAG00000030643) #27 FAM161B (ENSFCAG00000012227) #28 COQ6 (ENSFCAG00000021892) #29 BBOF1 (ENSFCAG00000006200) #31 ALDH6A1 (ENSFCAG00000006202) #32 LIN52 (ENSFCAG00000042593) #33 VSX2 (ENSFCAG00000041695) #34 ABCD4 (ENSFCAG00000006206) #35 ENSFCAG00000041962 VRTN (ENSFCAG00000006363) SYNDIG1L (ENSFCAG00000006364) #36 NPC2 (ENSFCAG00000029894) #37 Panthera ANCESTRAL SPECIES 3 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT01100000263504.a.b.a.b.a.b.ib ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000004322.a.b.j.f.b ENSGT00390000007874 ENSGT00950000183147.A.a #36 Tiger MODERN SPECIES 490 MAP3K9 (ENSPTIG00000018191) PCNX1 (ENSPTIG00000017962) SIPA1L1 (ENSPTIG00000017821) RGS6 (ENSPTIG00000017631) #7 DPF3 (ENSPTIG00000017482) #8 ENSPTIG00000017388 #9 ZFYVE1 (ENSPTIG00000017344) #10 RBM25 (ENSPTIG00000017309) #12 PSEN1 (ENSPTIG00000017262) #13 PAPLN (ENSPTIG00000017131) #14 NUMB (ENSPTIG00000017010) #15 ENSPTIG00000006627 HEATR4 (ENSPTIG00000016707) ENSPTIG00000016688 #17 ENSPTIG00000016670 #21 DNAL1 (ENSPTIG00000016650) #22 PNMA1 (ENSPTIG00000006614) #23 MIDEAS (ENSPTIG00000016612) #24 PTGR2 (ENSPTIG00000016591) #26 ZNF410 (ENSPTIG00000016457) #27 FAM161B (ENSPTIG00000016429) #28 COQ6 (ENSPTIG00000016344) #29 ENTPD5 (ENSPTIG00000016301) #30 BBOF1 (ENSPTIG00000016264) #31 ALDH6A1 (ENSPTIG00000016228) #32 LIN52 (ENSPTIG00000016204) #33 VSX2 (ENSPTIG00000016197) #34 ABCD4 (ENSPTIG00000016181) #35 ENSPTIG00000006594 VRTN (ENSPTIG00000016173) SYNDIG1L (ENSPTIG00000016165) #36 Panthera_a ANCESTRAL SPECIES 7 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT01100000263504.a.b.a.b.a.b.ib ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000004322.a.b.j.f.b ENSGT00390000007874 ENSGT00950000183147.A.a #36 leopard MODERN SPECIES 109 ENSPPRG00000000080 #9 ZFYVE1 (ENSPPRG00000024613) #10 RBM25 (ENSPPRG00000017374) #12 PSEN1 (ENSPPRG00000009940) #13 PAPLN (ENSPPRG00000008382) #14 NUMB (ENSPPRG00000004643) #15 ENSPPRG00000020804 HEATR4 (ENSPPRG00000000114) RIOX1 (ENSPPRG00000024007) #16 ENSPPRG00000024078 #17 ACOT4 (ENSPPRG00000024125) #19 ENSPPRG00000024290 #21 DNAL1 (ENSPPRG00000024432) #22 PNMA1 (ENSPPRG00000020738) #23 MIDEAS (ENSPPRG00000024652) #24 PTGR2 (ENSPPRG00000024906) #26 ZNF410 (ENSPPRG00000024973) #27 FAM161B (ENSPPRG00000025014) #28 COQ6 (ENSPPRG00000025059) #29 ENTPD5 (ENSPPRG00000021643) #30 BBOF1 (ENSPPRG00000018080) #31 ALDH6A1 (ENSPPRG00000016252) #32 LIN52 (ENSPPRG00000014701) #33 VSX2 (ENSPPRG00000014452) #34 ABCD4 (ENSPPRG00000014193) #35 ENSPPRG00000020217 SYNDIG1L (ENSPPRG00000012500) #36 NPC2 (ENSPPRG00000012026) #37 lion MODERN SPECIES 6 RGS6 (ENSPLOG00000018169) #7 DPF3 (ENSPLOG00000018551) #8 ENSPLOG00000018852 #9 ZFYVE1 (ENSPLOG00000018965) #10 RBM25 (ENSPLOG00000019022) #12 PSEN1 (ENSPLOG00000019082) #13 PAPLN (ENSPLOG00000000483) #14 ENSPLOG00000000547 #15 ENSPLOG00000000607 ENSPLOG00000000621 RIOX1 (ENSPLOG00000000634) #16 ENSPLOG00000000646 #17 ACOT4 (ENSPLOG00000000671) #19 ACOT6 (ENSPLOG00000000692) #21 ENSPLOG00000000753 ##17 DNAL1 (ENSPLOG00000000836) #22 PNMA1 (ENSPLOG00000000861) #23 MIDEAS (ENSPLOG00000000882) #24 PTGR2 (ENSPLOG00000000929) #26 ZNF410 (ENSPLOG00000001034) #27 FAM161B (ENSPLOG00000001079) #28 COQ6 (ENSPLOG00000001111) #29 ENTPD5 (ENSPLOG00000001145) #30 BBOF1 (ENSPLOG00000001180) #31 ALDH6A1 (ENSPLOG00000001208) #32 LIN52 (ENSPLOG00000001251) #33 VSX2 (ENSPLOG00000001284) #34 ABCD4 (ENSPLOG00000001310) #35 ENSPLOG00000001333 VRTN (ENSPLOG00000001350) SYNDIG1L (ENSPLOG00000001355) #36 Caniformia ANCESTRAL SPECIES 15 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Canidae ANCESTRAL SPECIES 4 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223.q #37 Canis_lupus ANCESTRAL SPECIES 8 ENSGT00950000183779 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223.q #37 Dog MODERN SPECIES 36 RGS6 (ENSCAFG00845010233) #7 ENSCAFG00845011536 DPF3 (ENSCAFG00845011584) #8 DCAF4 (ENSCAFG00845011739) #9 ZFYVE1 (ENSCAFG00845011945) #10 RBM25 (ENSCAFG00845012038) #12 PSEN1 (ENSCAFG00845012166) #13 ENSCAFG00845012353 PAPLN (ENSCAFG00845012413) #14 NUMB (ENSCAFG00845012636) #15 ENSCAFG00845012842 ENSCAFG00845012882 HEATR4 (ENSCAFG00845012914) RIOX1 (ENSCAFG00845012971) #16 ACOT6 (ENSCAFG00845013022) #21 DNAL1 (ENSCAFG00845013115) #22 PNMA1 (ENSCAFG00845013185) #23 ELMSAN1 (ENSCAFG00845013233) #24 PTGR2 (ENSCAFG00845013371) #26 ENSCAFG00845013463 ZNF410 (ENSCAFG00845013533) #27 FAM161B (ENSCAFG00845013672) #28 COQ6 (ENSCAFG00845013722) #29 ENTPD5 (ENSCAFG00845013833) #30 BBOF1 (ENSCAFG00845013911) #31 ALDH6A1 (ENSCAFG00845013992) #32 LIN52 (ENSCAFG00845014059) #33 VSX2 (ENSCAFG00845014112) #34 ENSCAFG00845014165 #35 ENSCAFG00845014218 ENSCAFG00845014241 Dingo MODERN SPECIES 161 ENSCAFG00020004563 ENSCAFG00020004555 #9 ZFYVE1 (ENSCAFG00020004549) #10 ENSCAFG00020004548 #12 ENSCAFG00020004545 ENSCAFG00020004536 PSEN1 (ENSCAFG00020004532) #13 PAPLN (ENSCAFG00020004479) #14 NUMB (ENSCAFG00020004468) #15 RIOX1 (ENSCAFG00020004426) #16 ENSCAFG00020004414 ENSCAFG00020004409 #17 ACOT4 (ENSCAFG00020004399) #19 ACOT6 (ENSCAFG00020004396) #21 ENSCAFG00020004395 DNAL1 (ENSCAFG00020004388) #22 PNMA1 (ENSCAFG00020004385) #23 MIDEAS (ENSCAFG00020004292) #24 PTGR2 (ENSCAFG00020004198) #26 ZNF410 (ENSCAFG00020004185) #27 FAM161B (ENSCAFG00020004178) #28 COQ6 (ENSCAFG00020004166) #29 ENTPD5 (ENSCAFG00020004058) #30 BBOF1 (ENSCAFG00020004003) #31 ALDH6A1 (ENSCAFG00020003666) #32 LIN52 (ENSCAFG00020003644) #33 VSX2 (ENSCAFG00020003629) #34 ENSCAFG00020003625 #35 ENSCAFG00020003619 #35 VRTN (ENSCAFG00020003595) ENSCAFG00020003586 #37 Caniformia_b ANCESTRAL SPECIES 14 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01050000245403.b ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Ursidae ANCESTRAL SPECIES 10 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223.t #37 Giant Panda MODERN SPECIES 5 PCNX1 (ENSAMEG00000008031) SIPA1L1 (ENSAMEG00000006090) RGS6 (ENSAMEG00000016168) #7 DPF3 (ENSAMEG00000016206) #8 ZFYVE1 (ENSAMEG00000016254) #10 RBM25 (ENSAMEG00000016270) #12 PSEN1 (ENSAMEG00000018205) #13 PAPLN (ENSAMEG00000018209) #14 NUMB (ENSAMEG00000018215) #15 HEATR4 (ENSAMEG00000018217) RIOX1 (ENSAMEG00000018220) #16 ENSAMEG00000018221 #17 ACOT4 (ENSAMEG00000027361) #19 ACOT6 (ENSAMEG00000018224) #21 ENSAMEG00000025452 ##17 DNAL1 (ENSAMEG00000018225) #22 PNMA1 (ENSAMEG00000019053) #23 MIDEAS (ENSAMEG00000018230) #24 PTGR2 (ENSAMEG00000018232) #26 ZNF410 (ENSAMEG00000029608) #27 FAM161B (ENSAMEG00000018241) #28 COQ6 (ENSAMEG00000018242) #29 ENTPD5 (ENSAMEG00000018251) #30 BBOF1 (ENSAMEG00000018255) #31 ALDH6A1 (ENSAMEG00000018257) #32 LIN52 (ENSAMEG00000026519) #33 VSX2 (ENSAMEG00000018271) #34 ABCD4 (ENSAMEG00000018272) #35 VRTN (ENSAMEG00000027533) SYNDIG1L (ENSAMEG00000024409) #36 NPC2 (ENSAMEG00000024412) #37 Ursus ANCESTRAL SPECIES 11 ENSGT00940000159153 #8 ENSGT00910000147388 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005.f #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT01010000222336.a.a.a.pb ##17 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223.t #37 ENSGT00390000005700 Polar bear MODERN SPECIES 100 ENSUMAG00000009300 RGS6 (ENSUMAG00000009102) #7 DPF3 (ENSUMAG00000009079) #8 ENSUMAG00000009064 #9 ZFYVE1 (ENSUMAG00000009060) #10 ENSUMAG00000009058 #12 ENSUMAG00000009056 PSEN1 (ENSUMAG00000009050) #13 ENSUMAG00000009037 #14 NUMB (ENSUMAG00000009031) #15 ENSUMAG00000009019 ENSUMAG00000009015 #17 ENSUMAG00000009007 #19 ACOT6 (ENSUMAG00000009002) #21 ENSUMAG00000008999 ##17 DNAL1 (ENSUMAG00000008993) #22 PNMA1 (ENSUMAG00000008991) #23 MIDEAS (ENSUMAG00000008947) #24 PTGR2 (ENSUMAG00000008918) #26 ZNF410 (ENSUMAG00000008911) #27 FAM161B (ENSUMAG00000008908) #28 COQ6 (ENSUMAG00000008906) #29 ENTPD5 (ENSUMAG00000008900) #30 BBOF1 (ENSUMAG00000008882) #31 ALDH6A1 (ENSUMAG00000008875) #32 LIN52 (ENSUMAG00000008858) #33 ABCD4 (ENSUMAG00000008856) #35 SYNDIG1L (ENSUMAG00000008850) #36 NPC2 (ENSUMAG00000008831) #37 ISCA2 (ENSUMAG00000008826) LTBP2 (ENSUMAG00000008811) Mustelinae ANCESTRAL SPECIES 14 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a.a.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Ferret MODERN SPECIES 164 ACOT6 (ENSMPUG00000009704) #21 DNAL1 (ENSMPUG00000009657) #22 MIDEAS (ENSMPUG00000009645) #24 PTGR2 (ENSMPUG00000009594) #26 ZNF410 (ENSMPUG00000009582) #27 FAM161B (ENSMPUG00000009566) #28 COQ6 (ENSMPUG00000009554) #29 ENTPD5 (ENSMPUG00000009544) #30 BBOF1 (ENSMPUG00000009527) #31 ALDH6A1 (ENSMPUG00000009514) #32 LIN52 (ENSMPUG00000009501) #33 VSX2 (ENSMPUG00000009490) #34 ABCD4 (ENSMPUG00000009467) #35 VRTN (ENSMPUG00000019665) SYNDIG1L (ENSMPUG00000009458) #36 NPC2 (ENSMPUG00000009402) #37 ISCA2 (ENSMPUG00000009385) American mink MODERN SPECIES DNAL1 (ENSNVIG00000016686) #22 PNMA1 (ENSNVIG00000016683) #23 MIDEAS (ENSNVIG00000016586) #24 PTGR2 (ENSNVIG00000016532) #26 ZN410 (ENSNVIG00000016346) #27 FAM161B (ENSNVIG00000016324) #28 COQ6 (ENSNVIG00000016297) #29 ENTP5 (ENSNVIG00000016247) #30 CN045 (ENSNVIG00000016193) #31 ALDH6A1 (ENSNVIG00000016166) #32 ENSNVIG00000016153 #33 VSX2 (ENSNVIG00000016140) #34 ABCD4 (ENSNVIG00000016067) #35 VRTN (ENSNVIG00000016057) SYNDIG1L (ENSNVIG00000016048) #36 NPC2 (ENSNVIG00000016016) #37 Atlantogenata ANCESTRAL SPECIES 8 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Afrotheria ANCESTRAL SPECIES 6 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Afrotheria_a ANCESTRAL SPECIES 6 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT01030000234522.C.b.e.b.a #23 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Elephant MODERN SPECIES 602 SIPA1L1 (ENSLAFG00000002094) ENSLAFG00000025866 RGS6 (ENSLAFG00000010825) #7 DPF3 (ENSLAFG00000002265) #8 ENSLAFG00000008436 #9 ZFYVE1 (ENSLAFG00000008437) #10 ENSLAFG00000001074 PSEN1 (ENSLAFG00000001076) #13 PAPLN (ENSLAFG00000001078) #14 NUMB (ENSLAFG00000001083) #15 HEATR4 (ENSLAFG00000014671) RIOX1 (ENSLAFG00000027699) #16 ENSLAFG00000013635 #17 ACOT4 (ENSLAFG00000013639) #19 ACOT6 (ENSLAFG00000027710) #21 DNAL1 (ENSLAFG00000001236) #22 ENSLAFG00000001238 #23 MIDEAS (ENSLAFG00000001240) #24 PTGR2 (ENSLAFG00000018111) #26 ZNF410 (ENSLAFG00000018117) #27 FAM161B (ENSLAFG00000030128) #28 COQ6 (ENSLAFG00000018122) #29 ENTPD5 (ENSLAFG00000010902) #30 BBOF1 (ENSLAFG00000002530) #31 ALDH6A1 (ENSLAFG00000002533) #32 LIN52 (ENSLAFG00000002534) #33 VSX2 (ENSLAFG00000002863) #34 ABCD4 (ENSLAFG00000002865) #35 VRTN (ENSLAFG00000026239) SYNDIG1L (ENSLAFG00000004416) #36 NPC2 (ENSLAFG00000002876) #37 Hyrax MODERN SPECIES 1576 DNAL1 (ENSPCAG00000006122) #22 ENSPCAG00000006181 #24 Tenrec MODERN SPECIES 1946 DNAL1 (ENSETEG00000000600) #22 ENSETEG00000000603 #23 ENSETEG00000000605 #24 Xenarthra ANCESTRAL SPECIES 20 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000013207 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.ob.a.a #17 ENSGT01010000222336.a.a.a.ob.a.b #19 ENSGT01010000222336.a.a.a.ob.b #21 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 ENSGT00390000005700 ENSGT00940000160884 Armadillo MODERN SPECIES 1229 PAPLN (ENSDNOG00000013874) #14 NUMB (ENSDNOG00000031669) #15 HEATR4 (ENSDNOG00000007403) RIOX1 (ENSDNOG00000046697) #16 ENSDNOG00000047237 #17 ACOT4 (ENSDNOG00000035435) #19 ENSDNOG00000047944 #21 DNAL1 (ENSDNOG00000008897) #22 MIDEAS (ENSDNOG00000008916) #24 PTGR2 (ENSDNOG00000037646) #26 ZNF410 (ENSDNOG00000015436) #27 FAM161B (ENSDNOG00000015442) #28 COQ6 (ENSDNOG00000015448) #29 ENTPD5 (ENSDNOG00000039070) #30 BBOF1 (ENSDNOG00000024781) #31 ALDH6A1 (ENSDNOG00000024213) #32 LIN52 (ENSDNOG00000038226) #33 VSX2 (ENSDNOG00000005036) #34 ENSDNOG00000032858 ABCD4 (ENSDNOG00000008122) #35 SYNDIG1L (ENSDNOG00000032053) #36 ENSDNOG00000016210 #37 ISCA2 (ENSDNOG00000034125) Sloth MODERN SPECIES 1761 DNAL1 (ENSCHOG00000006259) #22 Marsupialia ANCESTRAL SPECIES ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.mb.a #17 ENSGT01010000222336.a.a.a.nb #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT01040000244584 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00390000009546 #9 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.mb.a #17 ENSGT01010000222336.a.a.a.mb.b #17 ENSGT01010000222336.a.a.a.nb #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT01040000244584 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 ENSGT00390000006223 #37 Diprotodontia ANCESTRAL SPECIES ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153.u #8 ENSGT00940000164083 ENSGT00390000009546 #9 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.mb.a #17 ENSGT01010000222336.a.a.a.mb.b #17 ENSGT01010000222336.a.a.a.nb #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793.j #26 ENSGT00940000156793.i.a #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT01040000244584 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00940000157159 #7 ENSGT00970000197229 ENSGT00940000159153.u #8 ENSGT00390000009546 #9 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.mb.a #17 ENSGT01010000222336.a.a.a.mb.b #17 ENSGT01010000222336.a.a.a.nb #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793.j #26 ENSGT00940000158098 #27 ENSGT00940000159998 #28 ENSGT00390000015152 #29 ENSGT01100000263540.A.b #30 ENSGT01040000244584 ENSGT00940000154427.A #31 ENSGT00940000156110 #32 ENSGT00390000008992.b ENSGT00390000008402 #33 ENSGT00940000157776 #34 ENSGT00950000182955.a.a.b #35 ENSGT00390000007874 ENSGT00950000183147.A.a #36 Common wonbat MODERN SPECIES 1131 ENSVURG00010019116 ENSVURG00010019112 ENSVURG00010019107 #8 ENSVURG00010019094 ZFYVE1 (ENSVURG00010019074) #10 RBM25 (ENSVURG00010019040) #12 PSEN1 (ENSVURG00010019017) #13 PAPLN (ENSVURG00010018996) #14 NUMB (ENSVURG00010018654) #15 RIOX1 (ENSVURG00010018617) #16 ENSVURG00010018608 ENSVURG00010018604 #17 ENSVURG00010018598 #17 ENSVURG00010018553 #17 ENSVURG00010018542 DNAL1 (ENSVURG00010018526) #22 MIDEAS (ENSVURG00010018511) #24 PTGR2 (ENSVURG00010018483) #26 ZNF410 (ENSVURG00010018464) #27 FAM161B (ENSVURG00010018456) #28 COQ6 (ENSVURG00010018429) #29 ENTPD5 (ENSVURG00010018406) #30 ENSVURG00010018395 ENSVURG00010018393 #31 ALDH6A1 (ENSVURG00010018373) #32 ENSVURG00010018361 LIN52 (ENSVURG00010018345) #33 VSX2 (ENSVURG00010018334) #34 ABCD4 (ENSVURG00010018325) #35 VRTN (ENSVURG00010018318) SYNDIG1L (ENSVURG00010018306) #36 koala MODERN SPECIES 24 ENSPCIG00000008091 ENSPCIG00000008092 DPF3 (ENSPCIG00000008080) #8 ENSPCIG00000019926 #9 ZFYVE1 (ENSPCIG00000019924) #10 RBM25 (ENSPCIG00000011166) #12 PSEN1 (ENSPCIG00000011174) #13 PAPLN (ENSPCIG00000019359) #14 NUMB (ENSPCIG00000019351) #15 RIOX1 (ENSPCIG00000024145) #16 HEATR4 (ENSPCIG00000024141) ENSPCIG00000024100 #17 ENSPCIG00000024095 #17 ENSPCIG00000033915 #17 ENSPCIG00000024093 DNAL1 (ENSPCIG00000024092) #22 MIDEAS (ENSPCIG00000024091) #24 ENSPCIG00000005571 #26 ENSPCIG00000034997 #26 ENSPCIG00000022693 #26 ZNF410 (ENSPCIG00000011341) #27 FAM161B (ENSPCIG00000011338) #28 COQ6 (ENSPCIG00000011329) #29 ENTPD5 (ENSPCIG00000011325) #30 BBOF1 (ENSPCIG00000015946) #31 ALDH6A1 (ENSPCIG00000010683) #32 ENSPCIG00000010654 LIN52 (ENSPCIG00000034115) #33 VSX2 (ENSPCIG00000010627) #34 ABCD4 (ENSPCIG00000010614) #35 VRTN (ENSPCIG00000008700) Wallaby MODERN SPECIES 2813 ENSMEUG00000005568 #22 Platypus MODERN SPECIES ENSOANG00000043704 PCNX1 (ENSOANG00000036004) SIPA1L1 (ENSOANG00000014068) RGS6 (ENSOANG00000004085) #7 DPF3 (ENSOANG00000045314) #8 ENSOANG00000001699 ZFYVE1 (ENSOANG00000040766) #10 RBM25 (ENSOANG00000001056) #12 PSEN1 (ENSOANG00000001055) #13 ENSOANG00000037772 #14 ENSOANG00000037472 #15 ENSOANG00000049924 ENSOANG00000042629 #16 ENSOANG00000042764 #17 ENSOANG00000037587 #17 DNAL1 (ENSOANG00000045825) #22 MIDEAS (ENSOANG00000044931) #24 ENSOANG00000049648 #30 PTGR2 (ENSOANG00000048501) #26 ZNF410 (ENSOANG00000040286) #27 COQ6 (ENSOANG00000040258) #29 BBOF1 (ENSOANG00000008768) #31 ALDH6A1 (ENSOANG00000043355) #32 LIN52 (ENSOANG00000048133) #33 ABCD4 (ENSOANG00000045221) #35 ENSOANG00000042721 #37 ENSOANG00000036503 ENSOANG00000051080 AREL1 (ENSOANG00000002627) FCF1 (ENSOANG00000039099) YLPM1 (ENSOANG00000009814) Sauria ANCESTRAL SPECIES 3 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a Archelosauria ANCESTRAL SPECIES 2 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a Archosauria ANCESTRAL SPECIES 5 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00990000210315 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000165311 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 Aves ANCESTRAL SPECIES 2 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00990000210315 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000165311 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 Neognathae ANCESTRAL SPECIES 4 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.j.b #17 ENSGT01010000222336.a.a.a.j.a #17 ENSGT01050000245403 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000165311 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 Galloanserae ANCESTRAL SPECIES 4 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00990000210315 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.j.b #17 ENSGT01010000222336.a.a.a.j.a #17 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000165311 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a Phasianidae ANCESTRAL SPECIES 4 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.j.b #17 ENSGT01010000222336.a.a.a.j.a #17 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715.a ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00990000210315 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.j.a #17 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00960000187715.a ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 ENSGT00940000156092 Chicken MODERN SPECIES 34 ADAM20 (ENSGALG00010021396) MAP3K9 (ENSGALG00010021307) PCNX1 (ENSGALG00010021293) SIPA1L1 (ENSGALG00010021265) RGS6 (ENSGALG00010021257) #7 DPF3 (ENSGALG00010021218) #8 ENSGALG00010021024 ZFYVE1 (ENSGALG00010021022) #10 RBM25 (ENSGALG00010021015) #12 PSEN1 (ENSGALG00010020984) #13 PAPLN (ENSGALG00010020966) #14 NUMB (ENSGALG00010020945) #15 RIOX1 (ENSGALG00010020870) #16 ENSGALG00010020898 #17 ENSGALG00010020875 #17 DNAL1 (ENSGALG00010020855) #22 MIDEAS (ENSGALG00010020847) #24 PTGR2 (ENSGALG00010020835) #26 TMEM62 (ENSGALG00010020818) PRPH2L (ENSGALG00010020790) UBR1 (ENSGALG00010020775) TTBK2 (ENSGALG00010020762) ENSGALG00010019865 ENSGALG00010019846 ENSGALG00010019735 HAUS2 (ENSGALG00010019693) LRRC57 (ENSGALG00010019635) SNAP23 (ENSGALG00010019529) ZNF106 (ENSGALG00010019509) CAPN3 (ENSGALG00010019472) GANC (ENSGALG00010019391) Japanese quail MODERN SPECIES 23 PCNX1 (ENSCJPG00005014974) SIPA1L1 (ENSCJPG00005014973) RGS6 (ENSCJPG00005014972) #7 DPF3 (ENSCJPG00005014971) #8 ENSCJPG00005014969 ZFYVE1 (ENSCJPG00005014968) #10 RBM25 (ENSCJPG00005014967) #12 ENSCJPG00005014966 PSEN1 (ENSCJPG00005014965) #13 PAPLN (ENSCJPG00005014964) #14 NUMB (ENSCJPG00005014963) #15 RIOX1 (ENSCJPG00005014962) #16 ENSCJPG00005014961 #17 ENSCJPG00005014960 #17 ENSCJPG00005014959 #17 DNAL1 (ENSCJPG00005014958) #22 ENSCJPG00005014957 PTGR2 (ENSCJPG00005014956) #26 TMEM62 (ENSCJPG00005014955) UBR1 (ENSCJPG00005014608) ENSCJPG00005014606 TTBK2 (ENSCJPG00005014605) ENSCJPG00005014604 ENSCJPG00005014603 ENSCJPG00005014482 ENSCJPG00005014481 HAUS2 (ENSCJPG00005014480) LRRC57 (ENSCJPG00005014479) SNAP23 (ENSCJPG00005014478) ZNF106 (ENSCJPG00005014477) CAPN3 (ENSCJPG00005014476) Neognathae_b ANCESTRAL SPECIES 6 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.j.b #17 ENSGT01010000222336.a.a.a.j.a #17 ENSGT01050000245403 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a Passeriformes ANCESTRAL SPECIES 5 ENSGT00940000155944 ENSGT01030000235253.c.a ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.j.b #17 ENSGT01010000222336.a.a.a.j.a #17 ENSGT01050000245403 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 ENSGT00940000156092 Great tit MODERN SPECIES 25 PCNX1 (ENSPMJG00000015029) SIPA1L1 (ENSPMJG00000015028) ENSPMJG00000015026 RGS6 (ENSPMJG00000015025) #7 DPF3 (ENSPMJG00000014996) #8 ENSPMJG00000014995 ZFYVE1 (ENSPMJG00000014994) #10 RBM25 (ENSPMJG00000014993) #12 PSEN1 (ENSPMJG00000014992) #13 PAPLN (ENSPMJG00000014991) #14 NUMB (ENSPMJG00000014990) #15 RIOX1 (ENSPMJG00000014989) #16 ENSPMJG00000014988 #17 ENSPMJG00000014987 #17 ENSPMJG00000014986 #17 DNAL1 (ENSPMJG00000014985) #22 MIDEAS (ENSPMJG00000014984) #24 PTGR2 (ENSPMJG00000014983) #26 TMEM62 (ENSPMJG00000014980) UBR1 (ENSPMJG00000014805) ENSPMJG00000014795 TTBK2 (ENSPMJG00000014794) ENSPMJG00000014793 ENSPMJG00000014792 ENSPMJG00000014791 ENSPMJG00000014790 HAUS2 (ENSPMJG00000014789) LRRC57 (ENSPMJG00000014788) SNAP23 (ENSPMJG00000014787) ZNF106 (ENSPMJG00000014786) CAPN3 (ENSPMJG00000014785) Passeriformes_d ANCESTRAL SPECIES 5 ENSGT00940000154629.B ENSGT00940000154267.A ENSGT00390000006370 ENSGT00390000007200 ENSGT00390000012493 ENSGT00940000165474 ENSGT00940000161350 ENSGT00940000164602 ENSGT00390000007594 ENSGT00390000013762.b.b ENSGT00940000155879 ENSGT00940000156269 ENSGT00940000160664 ENSGT00900000141196 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT01030000234606.a.a.a.b.a.d ENSGT00940000166230 ENSGT00940000158601 ENSGT01030000234606.a.a.a.b.b.b ENSGT01030000234606.a.a.a.b.b.a.a.a.a.a.a ENSGT01030000234606.a.a.a.b.b.a.a.a.a.a.b ENSGT01030000234606.a.a.a.b.b.a.b ENSGT01030000234606.a.a.a.b.b.a.a.b ENSGT01030000234606.a.a.a.b.b.a.a.a.a.b ENSGT01030000234606.a.a.a.b.b.a.a.a.b ENSGT01030000234606.a.a.a.a.a ENSGT01030000234606.a.a.b ENSGT00530000063596.B ENSGT00940000159481 ENSGT00940000159230 Passeriformes_g ANCESTRAL SPECIES ENSGT00940000154629.B ENSGT00940000154267.A ENSGT00390000006370 ENSGT00390000007200 ENSGT00390000012493 ENSGT00940000165474 ENSGT00940000161350 ENSGT00940000164602 ENSGT00390000007594 ENSGT00390000013762.b.b ENSGT00940000155879 ENSGT00940000156269 ENSGT00940000160664 ENSGT00900000141196 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT01030000234606.a.a.a.b.a.d ENSGT00940000166230 ENSGT00940000158601 ENSGT01030000234606.a.a.a.b.b.b ENSGT01030000234606.a.a.a.b.b.a.a.a.a.a.a ENSGT01030000234606.a.a.a.b.b.a.a.a.a.a.b ENSGT01030000234606.a.a.a.b.b.a.b ENSGT01030000234606.a.a.a.b.b.a.a.b ENSGT01030000234606.a.a.a.b.b.a.a.a.a.b ENSGT01030000234606.a.a.a.b.b.a.a.a.b ENSGT01030000234606.a.a.a.a.a ENSGT01030000234606.a.a.b ENSGT00530000063596.B ENSGT00940000159481 ENSGT00940000159230 Passeroidea ANCESTRAL SPECIES 1 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.j.b #17 ENSGT01010000222336.a.a.a.j.a #17 ENSGT01050000245403 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 ENSGT00940000156092 ENSGT00940000159230 Common canary MODERN SPECIES 3 TTC9 (ENSSCAG00000013403) MAP3K9 (ENSSCAG00000013423) PCNX1 (ENSSCAG00000013483) SIPA1L1 (ENSSCAG00000013689) RGS6 (ENSSCAG00000013705) #7 DPF3 (ENSSCAG00000013719) #8 ENSSCAG00000013733 ZFYVE1 (ENSSCAG00000013748) #10 RBM25 (ENSSCAG00000013754) #12 PSEN1 (ENSSCAG00000013766) #13 PAPLN (ENSSCAG00000013778) #14 NUMB (ENSSCAG00000013819) #15 ENSSCAG00000013889 #17 ENSSCAG00000013894 ENSSCAG00000013898 #17 DNAL1 (ENSSCAG00000013903) #22 MIDEAS (ENSSCAG00000013910) #24 PTGR2 (ENSSCAG00000013915) #26 TMEM62 (ENSSCAG00000013920) UBR1 (ENSSCAG00000013934) ENSSCAG00000013947 TTBK2 (ENSSCAG00000000155) ENSSCAG00000000262 ENSSCAG00000000386 ENSSCAG00000000404 HAUS2 (ENSSCAG00000000421) LRRC57 (ENSSCAG00000000434) SNAP23 (ENSSCAG00000000448) ZNF106 (ENSSCAG00000000462) CAPN3 (ENSSCAG00000000502) GANC (ENSSCAG00000000534) Neognathae_c ANCESTRAL SPECIES 6 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT01010000222336.a.a.a.j.b #17 ENSGT01010000222336.a.a.a.j.a #17 ENSGT01010000222336.a.a.a.k #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00990000211312 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 Golden eagle MODERN SPECIES 11 TTC9 (ENSACCG00020004592) MAP3K9 (ENSACCG00020004601) PCNX1 (ENSACCG00020004641) SIPA1L1 (ENSACCG00020004680) RGS6 (ENSACCG00020004790) #7 DPF3 (ENSACCG00020004883) #8 ENSACCG00020004908 ZFYVE1 (ENSACCG00020004921) #10 RBM25 (ENSACCG00020004935) #12 PSEN1 (ENSACCG00020004958) #13 PAPLN (ENSACCG00020004980) #14 NUMB (ENSACCG00020004999) #15 RIOX1 (ENSACCG00020004723) #16 ENSACCG00020004727 #17 ENSACCG00020004737 #17 DNAL1 (ENSACCG00020004745) #22 MIDEAS (ENSACCG00020004753) #24 PTGR2 (ENSACCG00020004764) #26 TMEM62 (ENSACCG00020004771) UBR1 (ENSACCG00020004952) ENSACCG00020005085 TTBK2 (ENSACCG00020005095) ENSACCG00020005115 ENSACCG00020005121 ENSACCG00020005228 ENSACCG00020005340 ENSACCG00020005355 ENSACCG00020005374 HAUS2 (ENSACCG00020005393) LRRC57 (ENSACCG00020005403) SNAP23 (ENSACCG00020005461) Kakapo MODERN SPECIES 21 ARMH4 (ENSSHBG00005004984) ENSSHBG00005004978 ENSSHBG00005004974 ENSSHBG00005004966 ENSSHBG00005004957 ACTR10 (ENSSHBG00005004946) PSMA3 (ENSSHBG00005004936) ARID4A (ENSSHBG00005004920) TIMM9 (ENSSHBG00005004908) KIAA0586 (ENSSHBG00005004883) DACT1 (ENSSHBG00005004863) ENSSHBG00005004842 ENSSHBG00005004820 #17 ENSSHBG00005004814 #17 ENSSHBG00005004809 #17 DNAL1 (ENSSHBG00005004800) #22 MIDEAS (ENSSHBG00005004781) #24 PTGR2 (ENSSHBG00005004757) #26 TMEM62 (ENSSHBG00005004749) UBR1 (ENSSHBG00005004491) ENSSHBG00005004424 ENSSHBG00005004416 ENSSHBG00005004400 ENSSHBG00005004395 ENSSHBG00005004370 ENSSHBG00005004346 ENSSHBG00005004331 HAUS2 (ENSSHBG00005004324) LRRC57 (ENSSHBG00005004315) SNAP23 (ENSSHBG00005004309) ZNF106 (ENSSHBG00005004168) African ostrich MODERN SPECIES 454 DPF3 (ENSSCUG00000007238) #8 ENSSCUG00000007246 ZFYVE1 (ENSSCUG00000007249) #10 RBM25 (ENSSCUG00000007254) #12 PSEN1 (ENSSCUG00000007259) #13 PAPLN (ENSSCUG00000007263) #14 NUMB (ENSSCUG00000007272) #15 ENSSCUG00000007283 DNAL1 (ENSSCUG00000007290) #22 ENSSCUG00000007294 Australian saltwater crocodile MODERN SPECIES 64 TTC9 (ENSCPRG00005018227) MAP3K9 (ENSCPRG00005018230) PCNX1 (ENSCPRG00005018238) SIPA1L1 (ENSCPRG00005018251) RGS6 (ENSCPRG00005018258) #7 DPF3 (ENSCPRG00005018260) #8 ENSCPRG00005018262 ZFYVE1 (ENSCPRG00005018267) #10 RBM25 (ENSCPRG00005018269) #12 PSEN1 (ENSCPRG00005018271) #13 PAPLN (ENSCPRG00005018276) #14 NUMB (ENSCPRG00005018289) #15 RIOX1 (ENSCPRG00005018318) #16 ENSCPRG00005018322 ENSCPRG00005018333 #17 DNAL1 (ENSCPRG00005018342) #22 MIDEAS (ENSCPRG00005018346) #24 PTGR2 (ENSCPRG00005018352) #26 TMEM62 (ENSCPRG00005018356) UBR1 (ENSCPRG00005018360) ENSCPRG00005018369 ENSCPRG00005018370 TTBK2 (ENSCPRG00005018374) ENSCPRG00005018382 ENSCPRG00005018388 ENSCPRG00005018391 SNAP23 (ENSCPRG00005018395) LRRC57 (ENSCPRG00005018400) ZNF106 (ENSCPRG00005018404) CAPN3 (ENSCPRG00005018409) GANC (ENSCPRG00005018421) Cryptodira ANCESTRAL SPECIES 3 ENSGT00940000161472 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a Testudinoidea ANCESTRAL SPECIES 349 ENSGT00950000185492 ENSGT00390000016904 #22 Testudinidae ANCESTRAL SPECIES 2 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT01000000220633 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a.l.b #17 ENSGT01010000222336.a.a.a.m #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a Goode s thornscrub tortoise MODERN SPECIES 18 PCNX1 (ENSGEVG00005015398) SIPA1L1 (ENSGEVG00005015348) RGS6 (ENSGEVG00005014917) #7 DPF3 (ENSGEVG00005014818) #8 ENSGEVG00005014783 ZFYVE1 (ENSGEVG00005014745) #10 RBM25 (ENSGEVG00005014715) #12 PSEN1 (ENSGEVG00005014684) #13 ENSGEVG00005014638 PAPLN (ENSGEVG00005014331) #14 NUMB (ENSGEVG00005014237) #15 RIOX1 (ENSGEVG00005014194) #16 ENSGEVG00005013997 ENSGEVG00005013961 #17 ENSGEVG00005013831 #17 DNAL1 (ENSGEVG00005013780) #22 MIDEAS (ENSGEVG00005013739) #24 PTGR2 (ENSGEVG00005013668) #26 TMEM62 (ENSGEVG00005013638) UBR1 (ENSGEVG00005013532) ENSGEVG00005013468 TTBK2 (ENSGEVG00005013159) ENSGEVG00005013097 ENSGEVG00005013039 ENSGEVG00005012995 ENSGEVG00005012934 ENSGEVG00005012817 HAUS2 (ENSGEVG00005012782) LRRC57 (ENSGEVG00005012762) SNAP23 (ENSGEVG00005012733) ZNF106 (ENSGEVG00005012688) Abingdon island giant tortoise MODERN SPECIES 720 ENSCABG00000002516 #17 ENSCABG00000002514 #17 ENSCABG00000002513 DNAL1 (ENSCABG00000002512) #22 MIDEAS (ENSCABG00000002509) #24 PTGR2 (ENSCABG00000002507) #26 TMEM62 (ENSCABG00000002503) ENSCABG00000002451 Emydidae ANCESTRAL SPECIES ENSGT00390000016904 #22 painted turtle MODERN SPECIES 729 RMDN3 (ENSCPBG00000013444) ENSCPBG00000013430 RAD51 (ENSCPBG00000013425) KNL1 (ENSCPBG00000013424) RPUSD2 (ENSCPBG00000013419) ENSCPBG00000013417 CCDC32 (ENSCPBG00000013415) ENSCPBG00000013413 METRN (ENSCPBG00000013409) JMJD7 (ENSCPBG00000013407) MAPKBP1 (ENSCPBG00000013390) MGA (ENSCPBG00000013377) TYRO3 (ENSCPBG00000013365) ENSCPBG00000013357 ENSCPBG00000013353 DNAL1 (ENSCPBG00000013349) #22 MIDEAS (ENSCPBG00000013347) #24 PTGR2 (ENSCPBG00000013345) #26 TMEM62 (ENSCPBG00000013344) UBR1 (ENSCPBG00000013317) ENSCPBG00000013301 TTBK2 (ENSCPBG00000013144) ENSCPBG00000013073 ENSCPBG00000013056 ENSCPBG00000013055 HAUS2 (ENSCPBG00000013052) LRRC57 (ENSCPBG00000013048) SNAP23 (ENSCPBG00000013044) ZNF106 (ENSCPBG00000013039) ENSCPBG00000012972 ENSCPBG00000012886 Chinese turtle MODERN SPECIES 1478 ZFYVE1 (ENSPSIG00000005895) #10 RBM25 (ENSPSIG00000006058) #12 PSEN1 (ENSPSIG00000006468) #13 PAPLN (ENSPSIG00000007973) #14 NUMB (ENSPSIG00000009521) #15 ENSPSIG00000009756 ENSPSIG00000009852 #17 ENSPSIG00000010193 #17 DNAL1 (ENSPSIG00000010857) #22 MIDEAS (ENSPSIG00000010863) #24 PTGR2 (ENSPSIG00000011175) #26 TMEM62 (ENSPSIG00000012387) Lepidosauria ANCESTRAL SPECIES 24 ENSGT00390000006370 ENSGT00390000007200 ENSGT00390000012493 ENSGT00940000165474 ENSGT00940000161350 ENSGT00940000164602 ENSGT00390000007594 ENSGT00390000013762.b.b ENSGT00940000155879 ENSGT00940000156269 ENSGT00940000160664 ENSGT00530000067874 ENSGT00900000141196 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT01030000234606.a.a.a.b.a.c.a ENSGT01030000234606.a.a.a.b.a.d ENSGT00940000166230 ENSGT00940000158601 ENSGT01030000234606.a.a.a.b.b.b ENSGT01030000234606.a.a.a.b.b.a.a.a.a.a.a ENSGT01030000234606.a.a.a.b.b.a.a.a.a.a.b ENSGT01030000234606.a.a.a.b.b.a.b ENSGT01030000234606.a.a.a.b.b.a.a.b ENSGT01030000234606.a.a.a.b.b.a.a.a.a.b ENSGT01030000234606.a.a.a.b.b.a.a.a.b ENSGT01030000234606.a.a.a.b.a.c.b ENSGT01030000234606.a.a.a.a.a ENSGT01030000234606.a.a.b ENSGT00530000063596.B Episquamata ANCESTRAL SPECIES ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 Toxicofera ANCESTRAL SPECIES 5 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00990000210315 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000164613 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 Elapidae ANCESTRAL SPECIES 3 ENSGT00940000161472.g.a ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 Elapidae_a ANCESTRAL SPECIES 4 ENSGT00940000161472.g.a ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000179287 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00940000173951 ENSGT00960000187715 ENSGT00940000164449 ENSGT00960000187136 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a Blue-lipped sea krait MODERN SPECIES 3149 RIOX1 (ENSLLTG00000004650) #16 HEATR4 (ENSLLTG00000004671) ENSLLTG00000004715 #17 ENSLLTG00000004722 #17 DNAL1 (ENSLLTG00000004732) #22 Indian cobra MODERN SPECIES TTC9 (ENSNNAG00000013483) MAP3K9 (ENSNNAG00000013526) PCNX1 (ENSNNAG00000013956) SIPA1L1 (ENSNNAG00000014046) RGS6 (ENSNNAG00000014110) #7 DPF3 (ENSNNAG00000014287) #8 ENSNNAG00000014329 ZFYVE1 (ENSNNAG00000014362) #10 RBM25 (ENSNNAG00000014412) #12 PSEN1 (ENSNNAG00000014429) #13 PAPLN (ENSNNAG00000014448) #14 NUMB (ENSNNAG00000014525) #15 RIOX1 (ENSNNAG00000014569) #16 ENSNNAG00000014574 #17 ENSNNAG00000014582 #17 DNAL1 (ENSNNAG00000014590) #22 MIDEAS (ENSNNAG00000014605) #24 PTGR2 (ENSNNAG00000014659) #26 TMEM62 (ENSNNAG00000014695) UBR1 (ENSNNAG00000014974) ENSNNAG00000016967 TTBK2 (ENSNNAG00000016988) ENSNNAG00000017003 ENSNNAG00000017020 ENSNNAG00000017047 ENSNNAG00000017151 HAUS2 (ENSNNAG00000017247) LRRC57 (ENSNNAG00000017252) SNAP23 (ENSNNAG00000017257) ZNF106 (ENSNNAG00000017284) CAPN3 (ENSNNAG00000017366) Laterata ANCESTRAL SPECIES 2 ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 #7 ENSGT00940000159153 #8 ENSGT00940000164083 ENSGT00390000016097 #10 ENSGT00730000111019 #12 ENSGT00940000166770 ENSGT00940000158751 #13 ENSGT00940000156891 #14 ENSGT00940000156005 #15 ENSGT00390000000083.a #16 ENSGT00390000013207 ENSGT01010000222336.a.a.a #17 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 ENSGT00950000183075.a.a.a.b ENSGT00940000163655 ENSGT00940000160367 ENSGT00960000187715 ENSGT00940000164449 ENSGT00940000163117 ENSGT00390000004927 ENSGT00940000157393 ENSGT00950000182843.a.a.a.a ENSGT00940000157336 ENSGT00940000156092 ENSGT00900000143380 Argentine black and white tegu MODERN SPECIES 3 MAP3K9 (ENSSMRG00000009818) PCNX1 (ENSSMRG00000009870) SIPA1L1 (ENSSMRG00000009895) RGS6 (ENSSMRG00000009910) #7 DPF3 (ENSSMRG00000009927) #8 ENSSMRG00000009934 ZFYVE1 (ENSSMRG00000009939) #10 RBM25 (ENSSMRG00000009944) #12 PSEN1 (ENSSMRG00000009951) #13 PAPLN (ENSSMRG00000009970) #14 NUMB (ENSSMRG00000009974) #15 RIOX1 (ENSSMRG00000009976) #16 ENSSMRG00000009978 ENSSMRG00000009990 #17 ENSSMRG00000010006 #17 DNAL1 (ENSSMRG00000010008) #22 MIDEAS (ENSSMRG00000010009) #24 PTGR2 (ENSSMRG00000010011) #26 ENSSMRG00000010014 TMEM62 (ENSSMRG00000010019) UBR1 (ENSSMRG00000010028) ENSSMRG00000010037 TTBK2 (ENSSMRG00000010040) ENSSMRG00000010043 ENSSMRG00000010047 ENSSMRG00000010050 ENSSMRG00000010058 HAUS2 (ENSSMRG00000010059) LRRC57 (ENSSMRG00000010060) SNAP23 (ENSSMRG00000010062) ZNF106 (ENSSMRG00000010063) Anura ANCESTRAL SPECIES 397 ENSGT00390000016904 #22 ENSGT00940000157459 #24 ENSGT00940000156793 #26 ENSGT00390000016216 Leishan spiny toad MODERN SPECIES 4 NGB (ENSLLEG00000023441) TMEM63C (ENSLLEG00000023121) ZDHHC22 (ENSLLEG00000023067) ENSLLEG00000022935 IRF2BPL (ENSLLEG00000022908) LRRC74A (ENSLLEG00000022779) ENSLLEG00000022679 VASH1 (ENSLLEG00000022253) ENSLLEG00000021879 IFT43 (ENSLLEG00000029165) SNAP23 (ENSLLEG00000029135) LRRC57 (ENSLLEG00000029111) HAUS2 (ENSLLEG00000029053) ENSLLEG00000028963 ENSLLEG00000028873 #17 DNAL1 (ENSLLEG00000028794) #22 MIDEAS (ENSLLEG00000028739) #24 PTGR2 (ENSLLEG00000028577) #26 TMEM62 (ENSLLEG00000028514) SRP54 (ENSLLEG00000028415) ENSLLEG00000028362 BAZ1A (ENSLLEG00000028193) CFL2 (ENSLLEG00000028145) SNX6 (ENSLLEG00000028033) EAPP (ENSLLEG00000027981) INSM2 (ENSLLEG00000027899) RALGAPA1 (ENSLLEG00000027614) BRMS1L (ENSLLEG00000027170) MBIP (ENSLLEG00000027047) NKX2-1 (ENSLLEG00000026992) NKX2-8 (ENSLLEG00000026970) Frog MODERN SPECIES 8 ENSXETG00000000048 jmjd7 (ENSXETG00000037329) #17 mapkbp1 (ENSXETG00000047578) mga (ENSXETG00000000051) tyro3 (ENSXETG00000000052) tmem151b (ENSXETG00000000053) ENSXETG00000044984 rpap1 (ENSXETG00000000054) ENSXETG00000047282 ltk (ENSXETG00000000055) snap23 (ENSXETG00000000056) acot2 (ENSXETG00000000057) #17 heatr4 (ENSXETG00000036740) haus2 (ENSXETG00000035624) lrrc57 (ENSXETG00000000060) dnal1 (ENSXETG00000000061) #22 mideas (ENSXETG00000000062) #24 tmem62 (ENSXETG00000000950) ptgr2 (ENSXETG00000000953) #26 sil1 (ENSXETG00000038263) ubr1 (ENSXETG00000000961) prph2l (ENSXETG00000000983) ttbk2 (ENSXETG00000000979) cdan1 (ENSXETG00000000986) stard9 (ENSXETG00000034957) numb (ENSXETG00000000991) #15 papln (ENSXETG00000001002) #14 psen1 (ENSXETG00000001008) #13 rbm25 (ENSXETG00000021857) #12 zfyve1 (ENSXETG00000021852) #10 dcaf4 (ENSXETG00000021849) Coelacanth MODERN SPECIES 1303 SNAP23 (ENSLACG00000012476) LRRC57 (ENSLACG00000012256) HAUS2 (ENSLACG00000012157) ENSLACG00000011664 ENSLACG00000011570 #17 DNAL1 (ENSLACG00000011095) #22 MIDEAS (ENSLACG00000010528) #24 PTGR2 (ENSLACG00000009549) #26 TMEM62 (ENSLACG00000008640) Actinopterygii ANCESTRAL SPECIES 1156 ENSGT00950000185492 ENSGT00390000016904 #22 Reedfish DUPLICATION Reedfish MODERN SPECIES 7 katnbl1 (ENSECRG00000012231) srp14 (ENSECRG00000012254) rtf1 (ENSECRG00000012317) ndufaf1 (ENSECRG00000012368) nusap1 (ENSECRG00000012382) ENSECRG00000012403 chp1 (ENSECRG00000012419) pth2 (ENSECRG00000012446) tmem121ab (ENSECRG00000012453) ENSECRG00000012460 ENSECRG00000012476 ENSECRG00000012488 ENSECRG00000012501 srsf5b (ENSECRG00000012520) susd6 (ENSECRG00000012544) DNAL1 (ENSECRG00000012569) #22 SLC10A1 (ENSECRG00000012590) ENSECRG00000012598 smoc1 (ENSECRG00000012622) slc8a3 (ENSECRG00000012666) cox16 (ENSECRG00000012693) actn1 (ENSECRG00000012956) dcaf5 (ENSECRG00000013700) ENSECRG00000013718 ttbk2b (ENSECRG00000013738) ENSECRG00000013754 ENSECRG00000013785 ENSECRG00000013830 eif3f (ENSECRG00000013889) ndufs2 (ENSECRG00000013953) ENSECRG00000013975 Reedfish MODERN SPECIES 211 ENSECRG00000013874 ENSECRG00000013893 #22 ENSECRG00000013913 katnb1 (ENSECRG00000013929) ENSECRG00000013960 nudt2 (ENSECRG00000013969) ENSECRG00000014013 Neopterygii ANCESTRAL SPECIES 349 ENSGT00950000185492 ENSGT00390000016904 #22 ENSGT00390000011474 ENSGT00390000003866.a.b ENSGT00410000026259 ENSGT00940000158622 ENSGT01030000234532.A.a.b ENSGT00910000144260 ENSGT00390000005052 Spotted gar MODERN SPECIES 673 slc8a3 (ENSLOCG00000014049) cox16 (ENSLOCG00000014052) actn1 (ENSLOCG00000014057) dcaf5 (ENSLOCG00000014066) ENSLOCG00000017475 ENSLOCG00000017476 ENSLOCG00000014070 ENSLOCG00000014071 srsf5a (ENSLOCG00000014075) pacs2 (ENSLOCG00000014081) NDUFB1 (ENSLOCG00000014100) cpsf2 (ENSLOCG00000014102) slc24a4a (ENSLOCG00000014107) RIN3 (ENSLOCG00000014116) pth2 (ENSLOCG00000014124) dnal1 (ENSLOCG00000014125) #22 ENSLOCG00000014129 ENSLOCG00000014131 tmem121ab (ENSLOCG00000017477) fut8a (ENSLOCG00000014133) ENSLOCG00000014135 gphnb (ENSLOCG00000014136) ENSLOCG00000014143 ENSLOCG00000014147 pals1a (ENSLOCG00000014151) atp6v1d (ENSLOCG00000014159) eif2s1a (ENSLOCG00000014165) plek2 (ENSLOCG00000014169) si:ch211-10a23.2 (ENSLOCG00000014173) zfyve26 (ENSLOCG00000014174) ENSLOCG00000017478 Osteoglossocephalai ANCESTRAL SPECIES 720 ENSGT00950000185492 ENSGT00390000016904 #22 ENSGT00910000145250 Clupeocephala ANCESTRAL SPECIES 213 ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00940000158622 ENSGT00410000026259 ENSGT00950000182843.a.a.a.a ENSGT00940000158908 ENSGT00940000164613 ENSGT00940000173788 ENSGT00940000163117 ENSGT00940000164449 ENSGT00940000165020.b ENSGT00390000016216 ENSGT00940000156793 #26 ENSGT00940000157459.b #24 ENSGT00940000164671 Otomorpha ANCESTRAL SPECIES 394 ENSGT00390000007015.w ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a ENSGT00940000158908 ENSGT00940000164613 ENSGT00940000163117 ENSGT00940000164449 Otophysi ANCESTRAL SPECIES 80 ENSGT00390000007015.w ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a ENSGT00500000044870.a ENSGT00940000158839 ENSGT00390000013931 ENSGT01030000234626.B ENSGT00940000162166 ENSGT00940000160412.a ENSGT00950000182963.a.a ENSGT00530000063651.a ENSGT01030000234667.b.f.a ENSGT00950000183114.a.a Characiphysae ANCESTRAL SPECIES 4 ENSGT00940000158586 ENSGT00390000012377 ENSGT00940000156570.b ENSGT00940000153881.a ENSGT00940000158456 ENSGT00940000153433.B.a.b ENSGT00390000011270 ENSGT00390000008041.A ENSGT00940000157219.f ENSGT00390000017067 ENSGT00940000155936.a.a ENSGT00390000007015.w ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a ENSGT00500000044870.a ENSGT00940000158839 ENSGT00940000154607.a ENSGT00950000182963.a.a ENSGT00530000063651.a ENSGT00950000183114.a.a ENSGT00940000166718 ENSGT00940000157133 ENSGT00390000016811.g ENSGT00940000164041.a Characiphysae_b ANCESTRAL SPECIES 20 ENSGT00390000012377 ENSGT00940000156570.b ENSGT00940000153881.a ENSGT00940000158456 ENSGT00940000153433.B.a.b ENSGT00390000011270 ENSGT00390000008041.D ENSGT00390000008041.A ENSGT00940000157219.f ENSGT00390000017067 ENSGT00940000155936.a.a ENSGT00390000007015.w ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a ENSGT00500000044870.a ENSGT00940000158839 ENSGT00940000154607.a ENSGT00950000182963.a.a ENSGT00530000063651.a ENSGT00950000183114.a.a ENSGT00940000166718 ENSGT00940000157133 ENSGT00390000002143.b.a ENSGT00390000016811.g Characoidei ANCESTRAL SPECIES 208 ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a ENSGT00500000044870.a ENSGT00940000158839 ENSGT00950000182963.a.a ENSGT00530000063651.a ENSGT00950000183114.a.a ENSGT00940000166718 ENSGT00940000157133 ENSGT00390000002143.b.a ENSGT00390000016811.g ENSGT00940000164041.a Red-bellied piranha MODERN SPECIES 145 fut8a (ENSPNAG00000026320) dnal1 (ENSPNAG00000026275) #22 ENSPNAG00000026199 ENSPNAG00000026188 TMEM121 (ENSPNAG00000026174) pth2 (ENSPNAG00000004018) RIN3 (ENSPNAG00000026162) snap23.1 (ENSPNAG00000006548) ccdc28a (ENSPNAG00000026052) ECT2L (ENSPNAG00000026027) zgc:162964 (ENSPNAG00000026002) LIN9 (ENSPNAG00000025955) ENSPNAG00000025927 XDH (ENSPNAG00000025902) ENSPNAG00000005596 dnajc27 (ENSPNAG00000025619) EFR3B (ENSPNAG00000005499) Mexicana tetra MODERN SPECIES 24 abhd12 (ENSAMXG00000043906) hspa12a (ENSAMXG00000011627) eno4 (ENSAMXG00000011630) shtn1 (ENSAMXG00000011638) atp6v1ba (ENSAMXG00000011653) ENSAMXG00000035820 vax1 (ENSAMXG00000036022) ENSAMXG00000011676 ENSAMXG00000033807 ctsba (ENSAMXG00000011699) smyd2a (ENSAMXG00000038767) prox1a (ENSAMXG00000011717) pals1a (ENSAMXG00000011726) gphna (ENSAMXG00000011740) fut8a (ENSAMXG00000011744) dnal1 (ENSAMXG00000032331) #22 ENSAMXG00000011754 TMEM121 (ENSAMXG00000025420) pth2 (ENSAMXG00000011755) RIN3 (ENSAMXG00000011757) snap23.1 (ENSAMXG00000039971) ccdc28a (ENSAMXG00000030205) ENSAMXG00000011766 zgc:162964 (ENSAMXG00000011772) XDH (ENSAMXG00000011782) ENSAMXG00000011826 dnajc27 (ENSAMXG00000041488) EFR3B (ENSAMXG00000011856) pomca (ENSAMXG00000011859) ENSAMXG00000011865 snx9a (ENSAMXG00000011891) Channel catfish MODERN SPECIES 28 fam149b1 (ENSIPUG00000016190) efcab2 (ENSIPUG00000016155) nrde2 (ENSIPUG00000016129) ENSIPUG00000016112 ttc7b (ENSIPUG00000016077) mrp63 (ENSIPUG00000016074) KIF26B (ENSIPUG00000016029) smyd3 (ENSIPUG00000016003) TFB2M (ENSIPUG00000015951) cnst (ENSIPUG00000015931) sccpdh (ENSIPUG00000015885) ENSIPUG00000015815 ahctf1 (ENSIPUG00000015717) snap25b (ENSIPUG00000015696) cdk1 (ENSIPUG00000015647) dnal1 (ENSIPUG00000015580) #22 c9h14orf80 (ENSIPUG00000015561) TMEM121 (ENSIPUG00000015552) pth2 (ENSIPUG00000015545) RIN3 (ENSIPUG00000015511) snap23.1 (ENSIPUG00000015488) ccdc28a (ENSIPUG00000015478) ENSIPUG00000015398 zgc:162964 (ENSIPUG00000015380) ENSIPUG00000015365 xdh (ENSIPUG00000015176) dnajc27 (ENSIPUG00000015086) pomca (ENSIPUG00000015065) prox1 (ENSIPUG00000015051) smyd2a (ENSIPUG00000014969) ctsba (ENSIPUG00000014860) Cyprinoidei ANCESTRAL SPECIES 72 ENSGT00940000155443.c ENSGT00390000008069 ENSGT00390000003990.q ENSGT00940000155623 ENSGT01030000234564.a.a.a.a.b.a ENSGT00940000156714.a ENSGT00940000156464 ENSGT00390000007015.w ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a.ub ENSGT00950000182843.a.a.a.a.tb ENSGT00500000044870.a ENSGT00940000158839 ENSGT00530000063651.a ENSGT01030000234667.b.f.a ENSGT00950000183114.a.a ENSGT00940000166718 ENSGT00940000157133 ENSGT00390000002143.b.a ENSGT00390000016811.g Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 158 ENSGT00390000007015.w.b ENSGT00940000156087.a.a.b ENSGT00390000016577.b.a.c ENSGT00530000063737.l.b.a ENSGT00390000016904.g.a #22 ENSGT00940000168283.b ENSGT00390000003866.a.b.a.b ENSGT00410000026259.d ENSGT00940000158622.f ENSGT00950000182843.a.a.a.a.ub.a.b ENSGT00950000182843.a.a.a.a.tb.a ENSGT00500000044870.a.j.a.a ENSGT00530000063651.a.p.a ENSGT00950000183114.a.a.g ENSGT00940000166718.a ENSGT00940000157133.b ENSGT00390000002143.b.a.g.b ENSGT00390000016811.g.d ENSGT00940000164041.a ENSGT00940000156557.g.a Goldfish DUPLICATION Goldfish MODERN SPECIES 922 DNAL1 (ENSCARG00000033712) #22 Goldfish MODERN SPECIES 36 kcnk13a (ENSCARG00000069058) ENSCARG00000069046 efcab11 (ENSCARG00000069035) foxn3 (ENSCARG00000069026) dio2 (ENSCARG00000069018) ENSCARG00000069016 foxn3 (ENSCARG00000069010) ston2 (ENSCARG00000068984) dio2 (ENSCARG00000068972) ENSCARG00000068971 ENSCARG00000068960 eif2s1a (ENSCARG00000068948) pals1a (ENSCARG00000068891) gphna (ENSCARG00000068014) fut8a (ENSCARG00000067897) DNAL1 (ENSCARG00000067868) #22 ENSCARG00000067857 TMEM121 (ENSCARG00000067855) pth2 (ENSCARG00000067850) RIN3 (ENSCARG00000067819) snap23.1 (ENSCARG00000067794) ccdc28a (ENSCARG00000067784) zgc:162964 (ENSCARG00000067770) XDH (ENSCARG00000026293) ENSCARG00000025049 eif2s1a (ENSCARG00000025029) EFR3B (ENSCARG00000024897) pomca (ENSCARG00000024875) ENSCARG00000024866 snx9a (ENSCARG00000024699) prox1a (ENSCARG00000024670) Cyprininae_a ANCESTRAL SPECIES 160 ENSGT00390000007015.w.b ENSGT00940000156087.a.a.b ENSGT00390000016577.b.a.c ENSGT00530000063737.l.b.a ENSGT00390000016904.g.a #22 ENSGT00940000168283.b ENSGT00390000003866.a.b.a.b ENSGT00410000026259.d ENSGT00940000158622.f ENSGT00950000182843.a.a.a.a.ub.a.b ENSGT00950000182843.a.a.a.a.tb.a ENSGT00500000044870.a.j.a.a ENSGT00530000063651.a.p.a ENSGT00950000183114.a.a.g ENSGT00940000166718.a ENSGT00940000157133.b ENSGT00390000002143.b.a.g.b ENSGT00390000016811.g.d ENSGT00940000164041.a ENSGT00940000156557.g.a Common carp reference MODERN SPECIES 4 rnf144aa (ENSCCRG00000012999) adam17a (ENSCCRG00000002200) iah1 (ENSCCRG00000013979) itgb1bp1 (ENSCCRG00000013986) ENSCCRG00000067366 ENSCCRG00000070377 asap2a (ENSCCRG00000014017) MBOAT2 (ENSCCRG00000004529) KIDINS220 (ENSCCRG00000036900) id2a (ENSCCRG00000036843) ENSCCRG00000079476 eif2s1a (ENSCCRG00000019525) pals1a (ENSCCRG00000015300) gphna (ENSCCRG00000080356) fut8a (ENSCCRG00000034477) ENSCCRG00000070861 #22 ENSCCRG00000057185 ENSCCRG00000078141 pth2 (ENSCCRG00000034617) ENSCCRG00000034624 snap23.2 (ENSCCRG00000066564) snap23.1 (ENSCCRG00000047726) ccdc28a (ENSCCRG00000046167) zgc:162964 (ENSCCRG00000046158) ENSCCRG00000045851 ENSCCRG00000008596 dnajc27 (ENSCCRG00000008603) ENSCCRG00000022454 pomca (ENSCCRG00000008745) ENSCCRG00000057267 ENSCCRG00000008753 Cyprininae ANCESTRAL SPECIES 200 ENSGT00940000161652.b.b.b.a.a ENSGT00390000013670.i ENSGT00940000157701.f.b.a ENSGT00940000155443.c.a ENSGT00390000008069.b ENSGT00390000003990.q.b ENSGT00940000155623.l ENSGT01030000234564.a.a.a.a.b.a.o ENSGT00940000156714.a.b ENSGT00940000156464.eb.b.b ENSGT00390000007015.w.a ENSGT00940000156087.a.a.a ENSGT00390000016577.b.a.d ENSGT00530000063737.k ENSGT00530000063737.l.b.b ENSGT00390000016904.g.b #22 ENSGT00940000168283.a ENSGT00390000003866.a.b.a.a ENSGT00410000026259.c ENSGT00940000158622.e ENSGT00950000182843.a.a.a.a.ub.a.a ENSGT00950000182843.a.a.a.a.tb.b ENSGT00500000044870.a.i ENSGT00940000158839 ENSGT00530000063651.a.p.b ENSGT00950000183114.a.a.h ENSGT00940000166718.b ENSGT00940000157133.a ENSGT00390000002143.b.a.g.a ENSGT00390000016811.g.c ENSGT00940000156557.g.b Cyprininae_a ANCESTRAL SPECIES 186 ENSGT00940000161652.b.b.b.a.a ENSGT00390000013670.i ENSGT00940000157701.f.b.a ENSGT00940000155443.c.a ENSGT00390000008069.a ENSGT00390000003990.q.a ENSGT00390000003990.q.b ENSGT00940000155623.l ENSGT00940000163467.b.a.b.d.a.a.a ENSGT01030000234564.a.a.a.a.b.a.o ENSGT00940000156714.a.b ENSGT00940000156464.eb.b.b ENSGT00940000156087.a.a.a ENSGT00390000016577.b.a.d ENSGT00530000063737.l.b.b ENSGT00390000016904.g.b #22 ENSGT00940000168283.a ENSGT00390000003866.a.b.a.a ENSGT00410000026259.c ENSGT00940000158622.e ENSGT00950000182843.a.a.a.a.ub.a.a ENSGT00950000182843.a.a.a.a.tb.b ENSGT00500000044870.a.i ENSGT00940000158839 ENSGT00530000063651.a.p.b ENSGT00950000183114.a.a.h ENSGT00940000166718.b ENSGT00940000157133.a ENSGT00390000002143.b.a.g.a ENSGT00390000016811.g.c ENSGT00940000156557.g.b Common carp reference MODERN SPECIES 30 ENSCCRG00000058522 rsad2 (ENSCCRG00000002099) rnf144aa (ENSCCRG00000069223) adam17a (ENSCCRG00000060377) ENSCCRG00000009012 itgb1bp1 (ENSCCRG00000009017) asap2a (ENSCCRG00000009059) ENSCCRG00000077155 MBOAT2 (ENSCCRG00000049208) KIDINS220 (ENSCCRG00000080139) id2a (ENSCCRG00000053241) ENSCCRG00000057336 pals1a (ENSCCRG00000069533) gphna (ENSCCRG00000056188) fut8a (ENSCCRG00000017152) ENSCCRG00000064294 #22 ENSCCRG00000017363 ENSCCRG00000061596 pth2 (ENSCCRG00000064392) ENSCCRG00000036557 snap23.2 (ENSCCRG00000036552) snap23.2 (ENSCCRG00000047736) snap23.1 (ENSCCRG00000066190) ccdc28a (ENSCCRG00000047722) ENSCCRG00000047720 zgc:162964 (ENSCCRG00000047711) ENSCCRG00000029439 ENSCCRG00000013319 ENSCCRG00000067536 dnajc27 (ENSCCRG00000058575) ENSCCRG00000015411 Goldfish MODERN SPECIES 8 rnf144aa (ENSCARG00000050309) adam17a (ENSCARG00000037592) iah1 (ENSCARG00000037431) itgb1bp1 (ENSCARG00000037420) rsad2 (ENSCARG00000037380) asap2a (ENSCARG00000037172) MBOAT2 (ENSCARG00000036930) KIDINS220 (ENSCARG00000036445) id2a (ENSCARG00000036404) eif2s1a (ENSCARG00000036385) pals1a (ENSCARG00000035911) ENSCARG00000035882 ENSCARG00000035871 gphna (ENSCARG00000031847) fut8a (ENSCARG00000031718) DNAL1 (ENSCARG00000031691) #22 ENSCARG00000031684 TMEM121 (ENSCARG00000031678) pth2 (ENSCARG00000031669) RIN3 (ENSCARG00000031648) snap23.2 (ENSCARG00000031642) snap23.1 (ENSCARG00000031628) ccdc28a (ENSCARG00000031622) ECT2L (ENSCARG00000031614) zgc:162964 (ENSCARG00000031594) XDH (ENSCARG00000021943) ENSCARG00000021659 ENSCARG00000021654 dnajc27 (ENSCARG00000021643) EFR3B (ENSCARG00000021526) pomca (ENSCARG00000021498) Cyprininae ANCESTRAL SPECIES ENSGT00390000016904.h #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00390000016904.h #22 Golden-line barbel MODERN SPECIES 190 cdc42ep4a (ENSSGRG00000042299) ENSSGRG00000042301 dnal1 (ENSSGRG00000042302) #22 ENSSGRG00000042331 TMEM121 (ENSSGRG00000042332) RIN3 (ENSSGRG00000042334) snap23.2 (ENSSGRG00000042367) snap23.1 (ENSSGRG00000042368) ccdc28a (ENSSGRG00000042369) ENSSGRG00000042370 zgc:162964 (ENSSGRG00000042371) XDH (ENSSGRG00000042373) ENSSGRG00000042379 dnajc27 (ENSSGRG00000042406) EFR3B (ENSSGRG00000042418) pomca (ENSSGRG00000042419) snx9a (ENSSGRG00000042431) prox1a (ENSSGRG00000043063) Zebrafish DUPLICATION Zebrafish MODERN SPECIES 8 ENSDARG00000111789 CMPK2 (ENSDARG00000031359) rsad2 (ENSDARG00000004952) rnf144aa (ENSDARG00000020600) adam17a (ENSDARG00000043213) iah1 (ENSDARG00000015765) itgb1bp1 (ENSDARG00000007169) asap2a (ENSDARG00000010181) MBOAT2 (ENSDARG00000031845) KIDINS220 (ENSDARG00000031240) id2a (ENSDARG00000055283) eif2s1a (ENSDARG00000005827) pals1a (ENSDARG00000006272) gphna (ENSDARG00000089076) fut8a (ENSDARG00000015449) dnal1 (ENSDARG00000034042) #22 dnal1 (ENSDARG00000097505) #22 ENSDARG00000091366 TMEM121 (ENSDARG00000061562) pth2 (ENSDARG00000022951) ENSDARG00000077618 snap23.2 (ENSDARG00000055252) snap23.1 (ENSDARG00000012874) ccdc28a (ENSDARG00000022983) ECT2L (ENSDARG00000091471) zgc:162964 (ENSDARG00000024602) XDH (ENSDARG00000055240) ENSDARG00000043141 dnajc27 (ENSDARG00000070916) EFR3B (ENSDARG00000033516) pomca (ENSDARG00000043135) Zebrafish MODERN SPECIES 8 CMPK2 (ENSDARG00000031359) rsad2 (ENSDARG00000004952) rnf144aa (ENSDARG00000020600) adam17a (ENSDARG00000043213) iah1 (ENSDARG00000015765) itgb1bp1 (ENSDARG00000007169) asap2a (ENSDARG00000010181) MBOAT2 (ENSDARG00000031845) KIDINS220 (ENSDARG00000031240) id2a (ENSDARG00000055283) eif2s1a (ENSDARG00000005827) pals1a (ENSDARG00000006272) gphna (ENSDARG00000089076) fut8a (ENSDARG00000015449) dnal1 (ENSDARG00000034042) #22 dnal1 (ENSDARG00000097505) #22 ENSDARG00000091366 TMEM121 (ENSDARG00000061562) pth2 (ENSDARG00000022951) ENSDARG00000077618 snap23.2 (ENSDARG00000055252) snap23.1 (ENSDARG00000012874) ccdc28a (ENSDARG00000022983) ECT2L (ENSDARG00000091471) zgc:162964 (ENSDARG00000024602) XDH (ENSDARG00000055240) ENSDARG00000043141 dnajc27 (ENSDARG00000070916) EFR3B (ENSDARG00000033516) pomca (ENSDARG00000043135) snx9a (ENSDARG00000000837) Clupeiformes ANCESTRAL SPECIES 128 ENSGT00550000074910 ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00940000154785.A ENSGT00950000183136.a.a ENSGT00390000002237 ENSGT01030000234532.A.a.b.b ENSGT00950000183096.a.a.d ENSGT00390000005524 ENSGT00940000162930 ENSGT00940000158474 ENSGT00940000164711.b.b ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a ENSGT00940000158908 ENSGT00940000164613 ENSGT00940000163117 ENSGT00940000164449 ENSGT00940000159201 ENSGT00390000014679.d.a ENSGT00940000153431.a.v.b ENSGT00390000006205.b ENSGT00940000156572 ENSGT00970000193421.B Atlantic herring MODERN SPECIES 5 DGLUCY (ENSCHAG00000001070) slc24a4a (ENSCHAG00000002643) ENSCHAG00000003078 zgc:174356 (ENSCHAG00000003733) ENSCHAG00000003743 fam204a (ENSCHAG00000003772) PSMC1 (ENSCHAG00000003778) NRDE2 (ENSCHAG00000003997) ENSCHAG00000004759 ttc7b (ENSCHAG00000005201) ENSCHAG00000006850 gphna (ENSCHAG00000006914) fut8a (ENSCHAG00000007406) ENSCHAG00000007733 ENSCHAG00000007759 dnal1 (ENSCHAG00000007788) #22 ENSCHAG00000007802 TMEM121 (ENSCHAG00000007824) pth2 (ENSCHAG00000007827) ENSCHAG00000007837 snap23.1 (ENSCHAG00000007873) sptb (ENSCHAG00000007935) ENSCHAG00000010130 ENSCHAG00000010141 ENSCHAG00000010218 MDGA1 (ENSCHAG00000010480) zfand3 (ENSCHAG00000010833) zfand3 (ENSCHAG00000010878) ENSCHAG00000010901 ENSCHAG00000010927 ENSCHAG00000010953 Denticle herring DUPLICATION Denticle herring MODERN SPECIES ccdc88c (ENSDCDG00000000123) GPR68 (ENSDCDG00000000122) DGLUCY (ENSDCDG00000000121) ENSDCDG00000000119 slc24a4a (ENSDCDG00000000118) ENSDCDG00000000117 zgc:174356 (ENSDCDG00000000116) PSMC1 (ENSDCDG00000000114) ENSDCDG00000000113 NRDE2 (ENSDCDG00000000112) ENSDCDG00000000111 ttc7b (ENSDCDG00000000110) ENSDCDG00000000109 gphna (ENSDCDG00000000108) fut8a (ENSDCDG00000000107) DNAL1 (ENSDCDG00000000106) #22 DNAL1 (ENSDCDG00000000102) #22 fut8a (ENSDCDG00000000101) ENSDCDG00000000100 gphna (ENSDCDG00000000099) ENSDCDG00000000097 ENSDCDG00000000096 pcnx4 (ENSDCDG00000000094) dhrs7 (ENSDCDG00000000093) ppm1aa (ENSDCDG00000000092) ENSDCDG00000000091 ENSDCDG00000000090 ENSDCDG00000000088 ENSDCDG00000000087 ENSDCDG00000000086 ENSDCDG00000000085 Denticle herring MODERN SPECIES ENSDCDG00000000083 ENSDCDG00000000085 ENSDCDG00000000086 ENSDCDG00000000087 ENSDCDG00000000088 ENSDCDG00000000090 ENSDCDG00000000091 ppm1aa (ENSDCDG00000000092) dhrs7 (ENSDCDG00000000093) pcnx4 (ENSDCDG00000000094) ENSDCDG00000000096 ENSDCDG00000000097 gphna (ENSDCDG00000000099) ENSDCDG00000000100 fut8a (ENSDCDG00000000101) DNAL1 (ENSDCDG00000000102) #22 DNAL1 (ENSDCDG00000000106) #22 fut8a (ENSDCDG00000000107) gphna (ENSDCDG00000000108) ENSDCDG00000000109 ttc7b (ENSDCDG00000000110) ENSDCDG00000000111 NRDE2 (ENSDCDG00000000112) ENSDCDG00000000113 PSMC1 (ENSDCDG00000000114) zgc:174356 (ENSDCDG00000000116) ENSDCDG00000000117 slc24a4a (ENSDCDG00000000118) ENSDCDG00000000119 DGLUCY (ENSDCDG00000000121) GPR68 (ENSDCDG00000000122) Euteleosteomorpha ANCESTRAL SPECIES 19 ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a ENSGT00940000158908 ENSGT00940000164613 ENSGT00940000173788 ENSGT00940000163117 ENSGT00940000164449 ENSGT00940000165020.b ENSGT00390000016216 ENSGT00940000156793 #26 ENSGT00940000157459.b #24 ENSGT00940000164671 Acanthomorphata ANCESTRAL SPECIES 273 ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT01030000234513.A.a.a.a.b.d.b ENSGT01010000222987 ENSGT00940000154383.b ENSGT00940000153463.a.c.a ENSGT00940000160713 Euacanthomorphacea ANCESTRAL SPECIES 27 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT01030000234513.A.a.a.a.b.d.b ENSGT00940000154383.b ENSGT00940000153463.a.c.a ENSGT00940000160713 ENSGT00940000159420 ENSGT00530000063876.a ENSGT00390000006845 ENSGT00940000174492 ENSGT00940000167312 ENSGT00940000160421.i ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 ENSGT00950000182863.B.b Percomorphaceae ANCESTRAL SPECIES 26 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT01030000234513.A.a.a.a.b.d.b ENSGT00940000154383.b ENSGT00940000153463.a.c.a ENSGT00940000160713 ENSGT00940000159420 ENSGT00530000063876.a ENSGT00390000006845 ENSGT00940000174492 ENSGT00940000167312 ENSGT00940000160421.i.c ENSGT00940000160421.i.d ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00940000154482.b.b.b ENSGT00960000186719 ENSGT00940000154618 ENSGT00990000204009 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000154482.b.b.b ENSGT00960000186719 ENSGT00940000154618 ENSGT00990000204009 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Eupercaria ANCESTRAL SPECIES 9 ENSGT00940000158993 ENSGT00940000154482.b.b.b ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Tetraodontidae ANCESTRAL SPECIES ENSGT00390000016904 #22 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 ENSTNIG00000005292 ENSTNIG00000005291 ENSTNIG00000005290 frem1a (ENSTNIG00000005289) PAQR9 (ENSTNIG00000001564) ACO1 (ENSTNIG00000005288) ENSTNIG00000005287 ENSTNIG00000005286 arfrp1 (ENSTNIG00000005278) CA10 (ENSTNIG00000005272) ENSTNIG00000005269 ENSTNIG00000005268 ENSTNIG00000019484 ENSTNIG00000005267 tube1 (ENSTNIG00000005266) DNAL1 (ENSTNIG00000005265) #22 ENSTNIG00000005264 dag1 (ENSTNIG00000005263) nicn1 (ENSTNIG00000000874) oser1 (ENSTNIG00000005262) manf (ENSTNIG00000005261) rbm15b (ENSTNIG00000002438) ENSTNIG00000005250 cgrrf1 (ENSTNIG00000005249) psmc6 (ENSTNIG00000005248) ENSTNIG00000004513 ENSTNIG00000018510 ENSTNIG00000000869 ENSTNIG00000005244 ENSTNIG00000005243 ENSTNIG00000005237 Tetraodon MODERN SPECIES 26 ENSTNIG00000019615 ENSTNIG00000019585 ENSTNIG00000019821 ENSTNIG00000019685 kctd15a (ENSTNIG00000019575) ENSTNIG00000019535 ENSTNIG00000019691 ENSTNIG00000019655 hsd17b2 (ENSTNIG00000019720) gpia (ENSTNIG00000019788) ENSTNIG00000019704 abcg2c (ENSTNIG00000019778) ENSTNIG00000019779 arpc1a (ENSTNIG00000019780) arpc1b (ENSTNIG00000019781) DNAL1 (ENSTNIG00000019602) #22 spra (ENSTNIG00000019699) spra (ENSTNIG00000019718) spra (ENSTNIG00000019712) pnp4a (ENSTNIG00000019818) ENSTNIG00000000781 srd5a2a (ENSTNIG00000019827) ENSTNIG00000019815 RAP1GAP (ENSTNIG00000019473) ENSTNIG00000019482 ENSTNIG00000019813 ENSTNIG00000019639 ENSTNIG00000019770 ENSTNIG00000019505 ENSTNIG00000019701 TPM4 (ENSTNIG00000019471) Fugu MODERN SPECIES 7 ENSTRUG00000021964 ENSTRUG00000027941 ENSTRUG00000020931 irf2 (ENSTRUG00000001842) ENSTRUG00000032518 mcm9 (ENSTRUG00000026460) gopc (ENSTRUG00000026145) ENSTRUG00000027480 ufl1 (ENSTRUG00000001855) mfsd4b (ENSTRUG00000002351) REV3L (ENSTRUG00000002617) ENSTRUG00000028393 fynb (ENSTRUG00000003538) ccn6 (ENSTRUG00000031337) tube1 (ENSTRUG00000005085) dnal1 (ENSTRUG00000024991) #22 ENSTRUG00000005418 marcksa (ENSTRUG00000007040) HDAC2 (ENSTRUG00000006770) ENSTRUG00000027983 HS3ST5 (ENSTRUG00000006751) FRK (ENSTRUG00000006360) nt5dc1 (ENSTRUG00000006279) COL10A1 (ENSTRUG00000031328) ENSTRUG00000030927 dse (ENSTRUG00000006239) ENSTRUG00000030826 GPR63 (ENSTRUG00000006192) LRFN2 (ENSTRUG00000006117) zgc:112001 (ENSTRUG00000006108) olfcb1 (ENSTRUG00000005155) Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000158993 ENSGT00940000154482.b.b.b ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 644 ENSLBEG00000025022 PALS1 (ENSLBEG00000024969) ENSLBEG00000024839 DNAL1 (ENSLBEG00000024786) #22 pth2 (ENSLBEG00000024765) ENSLBEG00000024750 adi1 (ENSLBEG00000024723) trappc12 (ENSLBEG00000024697) ENSLBEG00000024683 Ballan wrasse MODERN SPECIES 1855 ENSLBEG00000001075 DNAL1 (ENSLBEG00000001102) #22 Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000164048 Gilthead seabream MODERN SPECIES 7 GPR68 (ENSSAUG00010020161) ENSSAUG00010020159 ENSSAUG00010020158 ccdc88c (ENSSAUG00010018481) PALS1 (ENSSAUG00010018421) ENSSAUG00010018416 ENSSAUG00010018415 ENSSAUG00010013240 ENSSAUG00010013194 ENSSAUG00010013193 dnal1 (ENSSAUG00010013189) #22 ENSSAUG00010013188 pth2 (ENSSAUG00010013186) ENSSAUG00010013184 ENSSAUG00010013183 ENSSAUG00010013179 ENSSAUG00010013176 adi1 (ENSSAUG00010013175) trappc12 (ENSSAUG00010013170) ENSSAUG00010013167 eipr1 (ENSSAUG00010013161) ENSSAUG00010013160 ENSSAUG00010013159 ENSSAUG00010013158 ENSSAUG00010013156 ENSSAUG00010013154 Eupercaria_incertae_sedis ANCESTRAL SPECIES 16 ENSGT01030000234583.a.a.c.a.a.g.a ENSGT00940000154482.b.b.b ENSGT00940000154618 ENSGT00990000204009 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000164048 European seabass MODERN SPECIES 2 dio2 (ENSDLAG00005018015) nrxn3a (ENSDLAG00005018215) ENSDLAG00005022123 adck1 (ENSDLAG00005004155) slirp (ENSDLAG00005004163) alkbh1 (ENSDLAG00005004173) GDF7 (ENSDLAG00005004181) ENSDLAG00005004190 APOB (ENSDLAG00005004225) ENSDLAG00005004706 DGLUCY (ENSDLAG00005004795) ENSDLAG00005027847 ccdc88c (ENSDLAG00005005424) ENSDLAG00005006090 ENSDLAG00005006350 dnal1 (ENSDLAG00005009581) #22 ENSDLAG00005009596 ENSDLAG00005009600 adi1 (ENSDLAG00005009613) trappc12 (ENSDLAG00005009667) eipr1 (ENSDLAG00005010854) MYT1L (ENSDLAG00005010915) PXDN (ENSDLAG00005011487) ENSDLAG00005011566 ENSDLAG00005011585 rtn4ip1 (ENSDLAG00005034059) qrsl1 (ENSDLAG00005012073) iars2 (ENSDLAG00005012118) rab3gap2 (ENSDLAG00005013513) kcnk5a (ENSDLAG00005031102) ENSDLAG00005029230 Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 477 ENSLCRG00005008337 PALS1 (ENSLCRG00005009311) ccdc88c (ENSLCRG00005009354) snapc1b (ENSLCRG00005010114) ENSLCRG00005010116 ENSLCRG00005010117 SGPP1 (ENSLCRG00005010118) ENSLCRG00005010119 DNAL1 (ENSLCRG00005010121) #22 dhrs13a.2 (ENSLCRG00005010147) nubpl (ENSLCRG00005010148) ARHGAP5 (ENSLCRG00005010422) AKAP6 (ENSLCRG00005010425) ENSLCRG00005010431 NPAS3 (ENSLCRG00005010444) egln3 (ENSLCRG00005010568) sptssa (ENSLCRG00005010569) eapp (ENSLCRG00005010570) PRKD1 (ENSLCRG00005010588) foxg1a (ENSLCRG00005013720) ehd4 (ENSLCRG00005013724) g2e3 (ENSLCRG00005013765) dhrs13a.1 (ENSLCRG00005013768) ENSLCRG00005013769 Large yellow croaker MODERN SPECIES 495 DNAL1 (ENSLCRG00005020286) #22 pth2 (ENSLCRG00005020285) ENSLCRG00005020282 adi1 (ENSLCRG00005020280) trappc12 (ENSLCRG00005020107) eipr1 (ENSLCRG00005020101) MYT1L (ENSLCRG00005019792) PXDN (ENSLCRG00005019757) CCR6 (ENSLCRG00005019753) ENSLCRG00005019749 rtn4ip1 (ENSLCRG00005019739) qrsl1 (ENSLCRG00005019736) iars2 (ENSLCRG00005018968) rab3gap2 (ENSLCRG00005016038) kcnk5a (ENSLCRG00005016006) ENSLCRG00005016004 Large yellow croaker DUPLICATION Large yellow croaker MODERN SPECIES 495 clic4 (ENSLCRG00005016832) runx3 (ENSLCRG00005016842) syf2 (ENSLCRG00005016873) rsrp1 (ENSLCRG00005016885) mgst3b (ENSLCRG00005016886) tmem50a (ENSLCRG00005016888) rhd (ENSLCRG00005016890) maco1b (ENSLCRG00005016897) ldlrap1b (ENSLCRG00005016904) ENSLCRG00005016905 FNDC5 (ENSLCRG00005016906) olig4 (ENSLCRG00005016907) bsdc1 (ENSLCRG00005016908) marcksl1a (ENSLCRG00005016918) gjb9a (ENSLCRG00005016919) DNAL1 (ENSLCRG00005016920) #22 DNAL1 (ENSLCRG00005016922) #22 ptp4a2a (ENSLCRG00005016923) ppp1r13ba (ENSLCRG00005016926) SYT14 (ENSLCRG00005016927) ENSLCRG00005016928 gnmt (ENSLCRG00005016929) ENSLCRG00005016930 ENSLCRG00005016931 ENSLCRG00005016932 ENSLCRG00005016937 ENSLCRG00005016940 TPO (ENSLCRG00005016942) sntg2 (ENSLCRG00005016945) kiaa1109 (ENSLCRG00005016987) zgc:100846 (ENSLCRG00005017121) Large yellow croaker MODERN SPECIES 495 lingo2b (ENSLCRG00005017122) zgc:100846 (ENSLCRG00005017121) kiaa1109 (ENSLCRG00005016987) sntg2 (ENSLCRG00005016945) TPO (ENSLCRG00005016942) ENSLCRG00005016940 ENSLCRG00005016937 ENSLCRG00005016932 ENSLCRG00005016931 ENSLCRG00005016930 gnmt (ENSLCRG00005016929) ENSLCRG00005016928 SYT14 (ENSLCRG00005016927) ppp1r13ba (ENSLCRG00005016926) ptp4a2a (ENSLCRG00005016923) DNAL1 (ENSLCRG00005016922) #22 DNAL1 (ENSLCRG00005016920) #22 gjb9a (ENSLCRG00005016919) marcksl1a (ENSLCRG00005016918) bsdc1 (ENSLCRG00005016908) olig4 (ENSLCRG00005016907) FNDC5 (ENSLCRG00005016906) ENSLCRG00005016905 ldlrap1b (ENSLCRG00005016904) maco1b (ENSLCRG00005016897) rhd (ENSLCRG00005016890) tmem50a (ENSLCRG00005016888) mgst3b (ENSLCRG00005016886) rsrp1 (ENSLCRG00005016885) syf2 (ENSLCRG00005016873) runx3 (ENSLCRG00005016842) Perciformes ANCESTRAL SPECIES 12 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Cottioidei ANCESTRAL SPECIES 45 ENSGT00940000169464 ENSGT00940000156452.b ENSGT00950000182998.A ENSGT00390000018097 ENSGT00940000154340.A ENSGT00940000156627.b ENSGT00940000156946 ENSGT01100000263524.I ENSGT00990000203829 ENSGT00390000014316.c.a ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00940000155695.i.b.b ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 Lumpfish MODERN SPECIES 14 ENSCLMG00005010523 ENSCLMG00005010956 GPR135 (ENSCLMG00005011403) ENSCLMG00005011405 jkamp (ENSCLMG00005011406) fam241a (ENSCLMG00005011407) enpep (ENSCLMG00005011411) rrh (ENSCLMG00005011419) ENSCLMG00005011428 ENSCLMG00005011429 DGLUCY (ENSCLMG00005011435) GPR68 (ENSCLMG00005011618) ccdc88c (ENSCLMG00005011622) PALS1 (ENSCLMG00005012278) ENSCLMG00005012347 dnal1 (ENSCLMG00005014035) #22 adi1 (ENSCLMG00005014039) trappc12 (ENSCLMG00005002918) eipr1 (ENSCLMG00005003355) ENSCLMG00005003358 PXDN (ENSCLMG00005003386) CCR6 (ENSCLMG00005004219) ENSCLMG00005004222 ENSCLMG00005004227 pth2 (ENSCLMG00005004229) rtn4ip1 (ENSCLMG00005004230) qrsl1 (ENSCLMG00005004875) iars2 (ENSCLMG00005004887) rab3gap2 (ENSCLMG00005005074) kcnk5a (ENSCLMG00005009187) KCNK16 (ENSCLMG00005009190) Stickleback MODERN SPECIES 15 gsc (ENSGACG00000013047) FLRT2 (ENSGACG00000013050) ENSGACG00000013053 galcb (ENSGACG00000013056) ak7b (ENSGACG00000013067) ENSGACG00000013078 vrk1 (ENSGACG00000013081) BCL11B (ENSGACG00000013118) setd3 (ENSGACG00000013126) CCNK (ENSGACG00000013132) ENSGACG00000013137 commd8 (ENSGACG00000013156) atp10d (ENSGACG00000013158) dapp1 (ENSGACG00000013166) ENSGACG00000013169 dnal1 (ENSGACG00000013180) #22 ENSGACG00000013199 pth2 (ENSGACG00000013205) ENSGACG00000013212 ENSGACG00000013223 ENSGACG00000013245 PXDN (ENSGACG00000013250) MYT1L (ENSGACG00000013255) eipr1 (ENSGACG00000013261) trappc12 (ENSGACG00000013267) adi1 (ENSGACG00000013274) rtn4ip1 (ENSGACG00000013286) qrsl1 (ENSGACG00000013299) iars2 (ENSGACG00000013305) rab3gap2 (ENSGACG00000013319) kcnk5a (ENSGACG00000013332) Perciformes_a ANCESTRAL SPECIES 10 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000159813 Channel bull blenny MODERN SPECIES 14 ENSCGOG00000008772 GABRG1 (ENSCGOG00000008746) ENSCGOG00000007753 ENSCGOG00000007725 atp10d (ENSCGOG00000007577) dapp1 (ENSCGOG00000007573) lamtor3 (ENSCGOG00000007557) zgc:123321 (ENSCGOG00000007554) rdh14a (ENSCGOG00000007552) ENSCGOG00000007550 osr1 (ENSCGOG00000007548) GPR68 (ENSCGOG00000007547) ccdc88c (ENSCGOG00000006930) PALS1 (ENSCGOG00000006348) ENSCGOG00000002908 dnal1 (ENSCGOG00000002603) #22 pth2 (ENSCGOG00000002598) ENSCGOG00000002589 gjb9a (ENSCGOG00000016152) ptp4a2a (ENSCGOG00000016149) ppp1r13ba (ENSCGOG00000016141) sdsl (ENSCGOG00000016127) SYT14 (ENSCGOG00000016122) ENSCGOG00000016121 gnmt (ENSCGOG00000016116) ENSCGOG00000016113 ENSCGOG00000016112 ENSCGOG00000016110 ENSCGOG00000016107 ENSCGOG00000016104 TPO (ENSCGOG00000016098) Pike perch MODERN SPECIES 39 commd8 (ENSSLUG00000019840) atp10d (ENSSLUG00000019829) dapp1 (ENSSLUG00000019821) lamtor3 (ENSSLUG00000019817) zgc:123321 (ENSSLUG00000019814) ENSSLUG00000019811 osr1 (ENSSLUG00000019808) CCDC85C (ENSSLUG00000019794) HHIPL1 (ENSSLUG00000019768) ENSSLUG00000019761 DGLUCY (ENSSLUG00000019479) GPR68 (ENSSLUG00000019424) ccdc88c (ENSSLUG00000019354) PALS1 (ENSSLUG00000019274) ENSSLUG00000019086 dnal1 (ENSSLUG00000019051) #22 pth2 (ENSSLUG00000019048) ENSSLUG00000019039 adi1 (ENSSLUG00000019032) trappc12 (ENSSLUG00000018915) eipr1 (ENSSLUG00000018867) ENSSLUG00000018862 PXDN (ENSSLUG00000018753) CCR6 (ENSSLUG00000018734) ENSSLUG00000018653 rtn4ip1 (ENSSLUG00000018618) qrsl1 (ENSSLUG00000018177) iars2 (ENSSLUG00000018049) rab3gap2 (ENSSLUG00000012863) kcnk5a (ENSSLUG00000012645) KCNK16 (ENSSLUG00000012637) Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000154482.b.b.b ENSGT00960000186719 ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000164048 Anabantaria ANCESTRAL SPECIES 10 ENSGT00940000156384.p ENSGT00940000154482.b.b.b ENSGT00960000186719 ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000164048 Zig-zag eel MODERN SPECIES 14 dio2 (ENSMAMG00000016317) ENSMAMG00000016260 ENSMAMG00000016225 ENSMAMG00000016181 nrxn3a (ENSMAMG00000016129) ENSMAMG00000027255 adck1 (ENSMAMG00000016094) slirp (ENSMAMG00000016076) alkbh1 (ENSMAMG00000016048) ENSMAMG00000016002 ENSMAMG00000015961 ENSMAMG00000015945 ENSMAMG00000015924 ENSMAMG00000015839 ENSMAMG00000015751 dnal1 (ENSMAMG00000015725) #22 ENSMAMG00000027292 ENSMAMG00000015707 adi1 (ENSMAMG00000015696) trappc12 (ENSMAMG00000015649) eipr1 (ENSMAMG00000015622) ENSMAMG00000028050 PXDN (ENSMAMG00000015492) ENSMAMG00000015484 ENSMAMG00000015464 rtn4ip1 (ENSMAMG00000015435) qrsl1 (ENSMAMG00000015389) iars2 (ENSMAMG00000015306) rab3gap2 (ENSMAMG00000015288) kcnk5a (ENSMAMG00000015271) ENSMAMG00000015262 Anabantoidei ANCESTRAL SPECIES 9 ENSGT00940000156384.p ENSGT00940000154482.b.b.b ENSGT00960000186719 ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000159813 Siamese fighting fish MODERN SPECIES 12 ENSBSLG00000024150 ccdc88c (ENSBSLG00000022627) ENSBSLG00000022548 PALS1 (ENSBSLG00000022384) ENSBSLG00000021341 dnal1 (ENSBSLG00000021075) #22 ENSBSLG00000020937 pth2 (ENSBSLG00000020181) ENSBSLG00000020171 ENSBSLG00000020169 ENSBSLG00000020166 ENSBSLG00000020165 adi1 (ENSBSLG00000020157) trappc12 (ENSBSLG00000019607) eipr1 (ENSBSLG00000019578) ENSBSLG00000019572 ENSBSLG00000019567 ENSBSLG00000019554 ENSBSLG00000019549 ENSBSLG00000019543 ENSBSLG00000019538 Climbing perch MODERN SPECIES 3 BCL11B (ENSATEG00000026097) setd3 (ENSATEG00000013687) CCNK (ENSATEG00000013664) dio2 (ENSATEG00000013649) nrxn3a (ENSATEG00000013575) adck1 (ENSATEG00000013544) slirp (ENSATEG00000013525) alkbh1 (ENSATEG00000013518) GDF7 (ENSATEG00000027655) ENSATEG00000013492 APOB (ENSATEG00000013209) GPR68 (ENSATEG00000027558) ENSATEG00000013151 ENSATEG00000013076 ENSATEG00000012938 dnal1 (ENSATEG00000025328) #22 ENSATEG00000012874 ENSATEG00000012858 adi1 (ENSATEG00000012842) trappc12 (ENSATEG00000012779) eipr1 (ENSATEG00000012735) PXDN (ENSATEG00000012552) ENSATEG00000012537 ENSATEG00000012528 ENSATEG00000012473 rtn4ip1 (ENSATEG00000012438) qrsl1 (ENSATEG00000012394) iars2 (ENSATEG00000012272) rab3gap2 (ENSATEG00000012226) kcnk5a (ENSATEG00000012216) KCNK16 (ENSATEG00000012177) Carangaria ANCESTRAL SPECIES 10 ENSGT00940000153168.C.a.b ENSGT00940000160181.i ENSGT00940000158993 ENSGT00940000154482.b.b.b ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448.g ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000164048 Carangaria_A ANCESTRAL SPECIES 4 ENSGT01100000263524.I ENSGT00990000203829 ENSGT00390000014316.c.a ENSGT00940000160193 ENSGT00940000157266.a ENSGT00940000154713.B ENSGT00390000018121 ENSGT00940000156728 ENSGT00910000144274 ENSGT00390000013159 ENSGT00940000160181.i ENSGT00940000158993 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448.g ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000164048 Seriola ANCESTRAL SPECIES 3 ENSGT00990000203829 ENSGT00390000014316.c.a ENSGT00940000160193 ENSGT00940000157266.a ENSGT00940000154713.B ENSGT00390000018121 ENSGT00940000156728 ENSGT00910000144274 ENSGT00390000013159 ENSGT00940000160181.i ENSGT00940000158993 ENSGT00940000154356.D.a.a.a.a.b ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448.g ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000164048 Yellowtail amberjack MODERN SPECIES 3240 GABRG1 (ENSSLDG00000013115) ENSSLDG00000013153 ENSSLDG00000013268 commd8 (ENSSLDG00000013291) atp10d (ENSSLDG00000013315) ENSSLDG00000013355 dapp1 (ENSSLDG00000013366) lamtor3 (ENSSLDG00000013384) rdh14a (ENSSLDG00000013397) osr1 (ENSSLDG00000013412) GPR68 (ENSSLDG00000013427) ENSSLDG00000013444 ccdc88c (ENSSLDG00000013475) PALS1 (ENSSLDG00000013533) ENSSLDG00000013569 dnal1 (ENSSLDG00000013607) #22 pth2 (ENSSLDG00000013623) ENSSLDG00000013639 adi1 (ENSSLDG00000013665) trappc12 (ENSSLDG00000013686) eipr1 (ENSSLDG00000013716) MYT1L (ENSSLDG00000013741) PXDN (ENSSLDG00000013799) CCR6 (ENSSLDG00000013891) ENSSLDG00000013944 rtn4ip1 (ENSSLDG00000014020) qrsl1 (ENSSLDG00000014048) iars2 (ENSSLDG00000014169) rab3gap2 (ENSSLDG00000014329) kcnk5a (ENSSLDG00000014389) ENSSLDG00000014409 Greater amberjack MODERN SPECIES 62 ENSSDUG00000021071 ENSSDUG00000021040 commd8 (ENSSDUG00000021031) ENSSDUG00000021027 atp10d (ENSSDUG00000021005) dapp1 (ENSSDUG00000020990) lamtor3 (ENSSDUG00000020973) rdh14a (ENSSDUG00000020967) ENSSDUG00000020959 osr1 (ENSSDUG00000020955) ENSSDUG00000020945 GPR68 (ENSSDUG00000020930) ccdc88c (ENSSDUG00000020903) PALS1 (ENSSDUG00000020815) ENSSDUG00000020735 dnal1 (ENSSDUG00000020707) #22 pth2 (ENSSDUG00000020693) ENSSDUG00000020676 adi1 (ENSSDUG00000020661) trappc12 (ENSSDUG00000020623) eipr1 (ENSSDUG00000020606) MYT1L (ENSSDUG00000020564) PXDN (ENSSDUG00000020416) CCR6 (ENSSDUG00000020402) ENSSDUG00000020319 rtn4ip1 (ENSSDUG00000020290) qrsl1 (ENSSDUG00000020235) iars2 (ENSSDUG00000020153) rab3gap2 (ENSSDUG00000019544) kcnk5a (ENSSDUG00000019479) ENSSDUG00000019468 Barramundi perch MODERN SPECIES 888 ENSLCAG00010003102 ENSLCAG00010003140 #22 Pleuronectoidei ANCESTRAL SPECIES 77 ENSGT00940000153168.C.a.b ENSGT00940000160181.i ENSGT00940000158993 ENSGT00940000154482.b.b.b ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 Turbot MODERN SPECIES 8 ENSSMAG00000030582 ENSSMAG00000028893 ccdc88c (ENSSMAG00000013791) ENSSMAG00000022189 ENSSMAG00000013785 DGLUCY (ENSSMAG00000013768) ENSSMAG00000013631 ENSSMAG00000013608 ENSSMAG00000034446 ENSSMAG00000029581 ENSSMAG00000035942 ENSSMAG00000027746 ENSSMAG00000032499 ENSSMAG00000015711 ENSSMAG00000015654 ENSSMAG00000015632 #22 ENSSMAG00000015604 ENSSMAG00000015520 ENSSMAG00000015511 ENSSMAG00000015495 ENSSMAG00000028304 ENSSMAG00000035742 HHIPL1 (ENSSMAG00000015436) CCDC85C (ENSSMAG00000029697) CCNK (ENSSMAG00000015407) BCL11B (ENSSMAG00000015370) vrk1 (ENSSMAG00000012827) ENSSMAG00000012808 ak7b (ENSSMAG00000012786) galcb (ENSSMAG00000012662) ENSSMAG00000012655 Tongue sole DUPLICATION Tongue sole MODERN SPECIES 10 slc6a7 (ENSCSEG00000018439) taf1 (ENSCSEG00000018452) fam76b (ENSCSEG00000018483) mtmr2 (ENSCSEG00000018496) cwc15 (ENSCSEG00000018582) plp1b (ENSCSEG00000018593) nlgn3b (ENSCSEG00000018608) gria3a (ENSCSEG00000018622) htatsf1 (ENSCSEG00000018667) STC2 (ENSCSEG00000018683) BNIP1 (ENSCSEG00000018692) CREBRF (ENSCSEG00000018697) PCYOX1L (ENSCSEG00000018708) TCERG1 (ENSCSEG00000018712) ENSCSEG00000018755 ENSCSEG00000018767 #22 tpst1l (ENSCSEG00000018769) asl (ENSCSEG00000018789) crcp (ENSCSEG00000018814) ca4c (ENSCSEG00000018817) aldh3a2b (ENSCSEG00000018826) ENSCSEG00000018838 vtnb (ENSCSEG00000018842) cryba1b (ENSCSEG00000018863) trarg1b (ENSCSEG00000018884) pcyt1bb (ENSCSEG00000018888) lipia (ENSCSEG00000018900) ENSCSEG00000018912 ENSCSEG00000018928 pdha1a (ENSCSEG00000018951) prdx4 (ENSCSEG00000018975) Tongue sole MODERN SPECIES LRFN5 (ENSCSEG00000000091) adh8a (ENSCSEG00000000092) ENSCSEG00000000093 ENSCSEG00000000094 ENSCSEG00000000095 metap1 (ENSCSEG00000000096) eif4eb (ENSCSEG00000000097) lingo2b (ENSCSEG00000000098) zgc:100846 (ENSCSEG00000000099) ENSCSEG00000000100 ENSCSEG00000000101 kiaa1109 (ENSCSEG00000000102) TPO (ENSCSEG00000000103) ENSCSEG00000000104 ENSCSEG00000000105 DNAL1 (ENSCSEG00000000106) #22 sdsl (ENSCSEG00000000107) SYT14 (ENSCSEG00000000108) gnmt (ENSCSEG00000000109) ENSCSEG00000000110 bsdc1 (ENSCSEG00000000111) FNDC5 (ENSCSEG00000000112) ldlrap1b (ENSCSEG00000000113) maco1b (ENSCSEG00000000114) rhd (ENSCSEG00000000115) tmem50a (ENSCSEG00000000116) syf2 (ENSCSEG00000000117) ENSCSEG00000000118 ENSCSEG00000000119 runx3 (ENSCSEG00000000120) clic4 (ENSCSEG00000000121) Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000153577.B ENSGT00940000154482.b.b.b ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000158079 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00940000166759 ENSGT00390000012840 Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1623 ercc1 (ENSNFUG00015025214) prmt2 (ENSNFUG00015025212) CABZ01067071.1 (ENSNFUG00015025211) ENSNFUG00015025210 DIP2A (ENSNFUG00015025203) ENSNFUG00015025202 CFLAR (ENSNFUG00015025201) FAM126B (ENSNFUG00015025198) TRPM2 (ENSNFUG00015025173) MAP3K13 (ENSNFUG00015025154) ENSNFUG00015025139 PFKL (ENSNFUG00015025023) TMEM169 (ENSNFUG00015025012) xrcc5 (ENSNFUG00015024995) COL6A2 (ENSNFUG00015024962) DNAL1 (ENSNFUG00015024954) #22 MARCH4 (ENSNFUG00015024950) SMARCAL1 (ENSNFUG00015024913) nme9 (ENSNFUG00015024888) zgc:162707 (ENSNFUG00015024880) ehhadh (ENSNFUG00015024876) TMEM41AA (ENSNFUG00015024872) IGF2BP2A (ENSNFUG00015024804) tra2b (ENSNFUG00015024781) ENSNFUG00015024694 ENSNFUG00015024684 ANKZF1 (ENSNFUG00015024679) ENSNFUG00015024604 ENSNFUG00015024585 ENSNFUG00015024578 ENSNFUG00015024573 Turquoise killifish MODERN SPECIES 1628 pum1 (ENSNFUG00015021955) NKAIN1 (ENSNFUG00015021931) SNRNP40 (ENSNFUG00015021920) zcchc17 (ENSNFUG00015021919) FABP3 (ENSNFUG00015021917) ENSNFUG00015021728 CYHR1 (ENSNFUG00015021722) ARPP21 (ENSNFUG00015021713) PDCD6IP (ENSNFUG00015021638) ubp1 (ENSNFUG00015021591) clasp2 (ENSNFUG00015020334) fbxl2 (ENSNFUG00015020172) ENSNFUG00015020165 crtap (ENSNFUG00015020158) fkbp9 (ENSNFUG00015020111) DNAL1 (ENSNFUG00015020100) #22 ENSNFUG00015020094 RPRD1A (ENSNFUG00015020073) ENSNFUG00015020066 NFYC (ENSNFUG00015020051) KCNQ4 (ENSNFUG00015019359) cfap300 (ENSNFUG00015019344) vamp8 (ENSNFUG00015019343) ncaph (ENSNFUG00015019332) TINAGL1 (ENSNFUG00015019296) LIM2 (ENSNFUG00015019294) UBQLN4 (ENSNFUG00015019223) rab25a (ENSNFUG00015019204) ZNF385D (ENSNFUG00015019197) ENSNFUG00015019192 kat2b (ENSNFUG00015018758) Mangrove rivulus MODERN SPECIES 2 pum1 (ENSKMAG00000003481) nkain1 (ENSKMAG00000003596) snrnp40 (ENSKMAG00000003625) zcchc17 (ENSKMAG00000003662) fabp3 (ENSKMAG00000003677) ENSKMAG00000003756 cyhr1 (ENSKMAG00000004026) ENSKMAG00000004052 pdcd6ip (ENSKMAG00000004128) ubp1 (ENSKMAG00000004223) clasp2 (ENSKMAG00000004284) fbxl2 (ENSKMAG00000004442) ENSKMAG00000004514 crtap (ENSKMAG00000004531) fkbp9 (ENSKMAG00000004544) dnal1 (ENSKMAG00000004577) #22 RPRD1A (ENSKMAG00000004597) nfyc (ENSKMAG00000004636) KCNQ4 (ENSKMAG00000004704) cfap300 (ENSKMAG00000004758) TINAGL1 (ENSKMAG00000004823) LIM2 (ENSKMAG00000004882) UBQLN4 (ENSKMAG00000004904) rab25a (ENSKMAG00000004945) ZNF385D (ENSKMAG00000004957) ENSKMAG00000004974 kat2b (ENSKMAG00000005023) RAB5A (ENSKMAG00000005111) ENSKMAG00000005130 ENSKMAG00000005159 ENSKMAG00000005172 Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 Poeciliinae ANCESTRAL SPECIES 18 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000177252 ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 Poecilia ANCESTRAL SPECIES 24 ENSGT00940000158079 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 NAME_6 ANCESTRAL SPECIES 21 ENSGT00940000158079 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 Sailfin molly MODERN SPECIES 1267 ubp1 (ENSPLAG00000001340) clasp2 (ENSPLAG00000001320) fbxl2 (ENSPLAG00000001286) ENSPLAG00000001280 crtap (ENSPLAG00000001275) fkbp9 (ENSPLAG00000001270) dnal1 (ENSPLAG00000001266) #22 Amazon molly MODERN SPECIES 273 pum1 (ENSPFOG00000007289) nkain1 (ENSPFOG00000024013) snrnp40 (ENSPFOG00000007663) zcchc17 (ENSPFOG00000007896) fabp3 (ENSPFOG00000007975) ENSPFOG00000008018 cyhr1 (ENSPFOG00000008037) ENSPFOG00000008096 pdcd6ip (ENSPFOG00000008147) ubp1 (ENSPFOG00000008378) clasp2 (ENSPFOG00000008615) fbxl2 (ENSPFOG00000009205) ENSPFOG00000009319 crtap (ENSPFOG00000009354) fkbp9 (ENSPFOG00000009499) dnal1 (ENSPFOG00000009636) #22 ENSPFOG00000022972 RPRD1A (ENSPFOG00000009698) ENSPFOG00000009758 nfyc (ENSPFOG00000009785) KCNQ4 (ENSPFOG00000009977) cfap300 (ENSPFOG00000010433) TINAGL1 (ENSPFOG00000024014) LIM2 (ENSPFOG00000010498) UBQLN4 (ENSPFOG00000010520) rab25a (ENSPFOG00000010632) ZNF385D (ENSPFOG00000010672) ENSPFOG00000010790 kat2b (ENSPFOG00000010842) RAB5A (ENSPFOG00000011263) otud6b (ENSPFOG00000011303) Guppy MODERN SPECIES 441 SDC3 (ENSPREG00000005172) pum1 (ENSPREG00000005195) nkain1 (ENSPREG00000005269) snrnp40 (ENSPREG00000005289) zcchc17 (ENSPREG00000005325) fabp3 (ENSPREG00000005333) ENSPREG00000005350 cyhr1 (ENSPREG00000005377) pdcd6ip (ENSPREG00000005420) ubp1 (ENSPREG00000005474) clasp2 (ENSPREG00000005520) fbxl2 (ENSPREG00000005611) ENSPREG00000005667 crtap (ENSPREG00000005707) fkbp9 (ENSPREG00000005728) dnal1 (ENSPREG00000005740) #22 RPRD1A (ENSPREG00000005762) ENSPREG00000005783 nfyc (ENSPREG00000005805) KCNQ4 (ENSPREG00000005859) cfap300 (ENSPREG00000005910) TINAGL1 (ENSPREG00000005972) LIM2 (ENSPREG00000006002) UBQLN4 (ENSPREG00000006021) rab25a (ENSPREG00000006119) ENSPREG00000006413 ENSPREG00000006434 kat2b (ENSPREG00000006463) ENSPREG00000006527 otud6b (ENSPREG00000006541) ENSPREG00000006593 Platyfish MODERN SPECIES 4 snrnp40 (ENSXMAG00000002970) zcchc17 (ENSXMAG00000002980) fabp3 (ENSXMAG00000002986) ENSXMAG00000002989 cyhr1 (ENSXMAG00000002990) ENSXMAG00000002994 pdcd6ip (ENSXMAG00000003000) ubp1 (ENSXMAG00000003023) clasp2 (ENSXMAG00000003043) ENSXMAG00000022442 fbxl2 (ENSXMAG00000003112) ENSXMAG00000026756 ENSXMAG00000029488 crtap (ENSXMAG00000003153) fkbp9 (ENSXMAG00000003160) dnal1 (ENSXMAG00000028736) #22 RPRD1A (ENSXMAG00000003172) ENSXMAG00000003178 nfyc (ENSXMAG00000003179) KCNQ4 (ENSXMAG00000003184) cfap300 (ENSXMAG00000007924) TINAGL1 (ENSXMAG00000003194) LIM2 (ENSXMAG00000003204) UBQLN4 (ENSXMAG00000003208) rab25a (ENSXMAG00000003233) ZNF385D (ENSXMAG00000026238) ENSXMAG00000003247 kat2b (ENSXMAG00000003253) RAB5A (ENSXMAG00000028889) otud6b (ENSXMAG00000003276) ENSXMAG00000003286 NAME_4 ANCESTRAL SPECIES 10 ENSGT00940000158079 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b.f ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT01030000234601.n.a.a.b.b.f Mummichog MODERN SPECIES 2253 ENSFHEG00000014691 ENSFHEG00000014681 crtap (ENSFHEG00000014662) fkbp9 (ENSFHEG00000014633) dnal1 (ENSFHEG00000014589) #22 ENSFHEG00000014531 RPRD1A (ENSFHEG00000014516) nfyc (ENSFHEG00000014493) KCNQ4 (ENSFHEG00000000825) cfap300 (ENSFHEG00000014297) TINAGL1 (ENSFHEG00000014281) LIM2 (ENSFHEG00000014247) UBQLN4 (ENSFHEG00000014233) rab25a (ENSFHEG00000014186) ENSFHEG00000014162 ENSFHEG00000014149 kat2b (ENSFHEG00000014137) ENSFHEG00000014070 otud6b (ENSFHEG00000014034) ENSFHEG00000013970 Sheepshead minnow MODERN SPECIES 183 pum1 (ENSCVAG00000007043) nkain1 (ENSCVAG00000007059) snrnp40 (ENSCVAG00000007097) zcchc17 (ENSCVAG00000007112) fabp3 (ENSCVAG00000007119) ENSCVAG00000007135 cyhr1 (ENSCVAG00000007158) ENSCVAG00000007202 pdcd6ip (ENSCVAG00000007264) ubp1 (ENSCVAG00000000202) clasp2 (ENSCVAG00000007610) fbxl2 (ENSCVAG00000007633) ENSCVAG00000007654 crtap (ENSCVAG00000007675) fkbp9 (ENSCVAG00000007686) dnal1 (ENSCVAG00000007704) #22 RPRD1A (ENSCVAG00000007732) ENSCVAG00000007740 nfyc (ENSCVAG00000007788) KCNQ4 (ENSCVAG00000007920) cfap300 (ENSCVAG00000008000) TINAGL1 (ENSCVAG00000008044) lim2.4 (ENSCVAG00000000221) UBQLN4 (ENSCVAG00000008099) rab25a (ENSCVAG00000008126) ZNF385D (ENSCVAG00000008136) ENSCVAG00000008142 kat2b (ENSCVAG00000008211) RAB5A (ENSCVAG00000008239) otud6b (ENSCVAG00000008258) ENSCVAG00000008267 Oryzias ANCESTRAL SPECIES 22 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f Oryzias_a ANCESTRAL SPECIES 18 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00990000210357 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f Japanese Medaka HdrR MODERN SPECIES 2 pum1 (ENSORLG00000011482) nkain1 (ENSORLG00000022267) snrnp40 (ENSORLG00000011539) zcchc17 (ENSORLG00000011563) fabp3 (ENSORLG00000011573) ENSORLG00000011581 cyhr1 (ENSORLG00000011594) ENSORLG00000011606 pdcd6ip (ENSORLG00000011651) ubp1 (ENSORLG00000011706) clasp2 (ENSORLG00000011760) fbxl2 (ENSORLG00000011797) ENSORLG00000027239 crtap (ENSORLG00000011852) fkbp9 (ENSORLG00000011880) dnal1 (ENSORLG00000011890) #22 RPRD1A (ENSORLG00000011917) ENSORLG00000011943 nfyc (ENSORLG00000012000) KCNQ4 (ENSORLG00000012041) cfap300 (ENSORLG00000012056) TINAGL1 (ENSORLG00000012101) ENSORLG00000012119 UBQLN4 (ENSORLG00000022806) rab25a (ENSORLG00000012158) ZNF385D (ENSORLG00000012168) sgo1 (ENSORLG00000012177) kat2b (ENSORLG00000012238) RAB5A (ENSORLG00000012261) otud6b (ENSORLG00000012290) runx1t1 (ENSORLG00000012311) Chinese medaka MODERN SPECIES 13 nkain1 (ENSOSIG00000012738) snrnp40 (ENSOSIG00000012057) fabp3 (ENSOSIG00000012052) ENSOSIG00000011279 cyhr1 (ENSOSIG00000011264) ENSOSIG00000011259 pdcd6ip (ENSOSIG00000011247) ubp1 (ENSOSIG00000008221) zcchc17 (ENSOSIG00000008189) clasp2 (ENSOSIG00000006729) fbxl2 (ENSOSIG00000006691) ENSOSIG00000006686 ENSOSIG00000006685 crtap (ENSOSIG00000006684) fkbp9 (ENSOSIG00000006497) dnal1 (ENSOSIG00000006492) #22 RPRD1A (ENSOSIG00000006488) ENSOSIG00000006483 nfyc (ENSOSIG00000006441) KCNQ4 (ENSOSIG00000006071) cfap300 (ENSOSIG00000006056) TINAGL1 (ENSOSIG00000006018) LIM2 (ENSOSIG00000006016) UBQLN4 (ENSOSIG00000006015) rab25a (ENSOSIG00000006014) ENSOSIG00000006012 ENSOSIG00000006010 kat2b (ENSOSIG00000005983) ENSOSIG00000005981 ENSOSIG00000005978 runx1t1 (ENSOSIG00000005853) Oryzias_b ANCESTRAL SPECIES 22 ENSGT00940000175655 ENSGT00940000159949 ENSGT00940000155058 ENSGT00510000047363 ENSGT00940000155104 ENSGT00940000159476 ENSGT00390000018258 ENSGT00940000155609.l ENSGT00940000163083 ENSGT00940000156148 ENSGT00940000155574.C ENSGT00940000153845.a.b ENSGT00390000009163 ENSGT00940000153814.a ENSGT00940000157125 ENSGT00390000016904 #22 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00510000047559 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f Javanese ricefish MODERN SPECIES 2 pum1 (ENSOJAG00000002521) nkain1 (ENSOJAG00000001884) snrnp40 (ENSOJAG00000001749) zcchc17 (ENSOJAG00000001627) fabp3 (ENSOJAG00000017031) ENSOJAG00000017012 cyhr1 (ENSOJAG00000016981) ENSOJAG00000016911 pdcd6ip (ENSOJAG00000016848) ubp1 (ENSOJAG00000016569) clasp2 (ENSOJAG00000014769) fbxl2 (ENSOJAG00000014384) ENSOJAG00000014328 crtap (ENSOJAG00000014314) fkbp9 (ENSOJAG00000014101) dnal1 (ENSOJAG00000014068) #22 RPRD1A (ENSOJAG00000014045) ENSOJAG00000014033 nfyc (ENSOJAG00000013876) KCNQ4 (ENSOJAG00000012989) cfap300 (ENSOJAG00000012913) TINAGL1 (ENSOJAG00000012826) LIM2 (ENSOJAG00000012774) UBQLN4 (ENSOJAG00000012728) rab25a (ENSOJAG00000012701) ENSOJAG00000012684 ENSOJAG00000012666 kat2b (ENSOJAG00000012098) ENSOJAG00000012005 otud6b (ENSOJAG00000011997) runx1t1 (ENSOJAG00000011709) Ovalentaria_B ANCESTRAL SPECIES 18 ENSGT00940000153577.B ENSGT00940000154482.b.b.b ENSGT00990000204009 ENSGT00940000154618 ENSGT00940000158221 ENSGT00390000008624 ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Cichlidae ANCESTRAL SPECIES 16 ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT01100000263505.b.b.a.b.a.a.a.a ENSGT00390000016904 #22 ENSGT00940000164445 ENSGT00940000163496.a ENSGT00940000157381.d ENSGT00940000159512 ENSGT00390000001557 ENSGT00390000016127 ENSGT00940000166574 ENSGT00940000167070 ENSGT00940000154937 ENSGT00940000157290 ENSGT00940000163009.b.a.a.b.b ENSGT00940000163852.c.b ENSGT00390000015789 ENSGT00940000154883.e.b ENSGT00390000012918.c Pseudocrenilabrinae DUPLICATION Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT01100000263505.b.b.a.b.a.a.a.a ENSGT00390000016904.x #22 ENSGT00940000164445.r ENSGT00940000163496.a.q ENSGT00940000164445.q ENSGT00940000157381.d ENSGT00940000159512 ENSGT00390000001557 ENSGT00390000016127 ENSGT00940000166574 ENSGT00940000167070 ENSGT00940000154937 ENSGT00940000157290 ENSGT00940000163009.b.a.a.b.b.`b.b ENSGT00940000163852.c.b ENSGT00940000163009.b.a.a.b.b.`b.a ENSGT00940000163009.b.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 12 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT00390000016904.x #22 ENSGT00940000164445.r ENSGT00940000164445.q.a ENSGT00940000163496.a.q ENSGT00940000164445.q.b ENSGT00940000157381.d ENSGT00940000159512 ENSGT00390000001557 ENSGT00390000016127 ENSGT00940000166574 ENSGT00940000167070 ENSGT00940000154937 ENSGT00940000157290 ENSGT00940000163009.b.a.a.b.b.`b.b.b ENSGT00940000163852.c.b.e.a ENSGT00940000163009.b.a.a.b.b.`b.a Lyretail cichlid MODERN SPECIES 375 suz12a (ENSNBRG00000009730) crlf3 (ENSNBRG00000009656) ENSNBRG00000009608 nde1 (ENSNBRG00000009537) ENSNBRG00000009432 ENSNBRG00000009419 gsg1l (ENSNBRG00000009388) ENSNBRG00000009374 flr (ENSNBRG00000009331) si:ch211-76l23.7 (ENSNBRG00000009294) alg1 (ENSNBRG00000009251) eef2kmt (ENSNBRG00000009228) pigq (ENSNBRG00000009176) rab40c (ENSNBRG00000009150) ENSNBRG00000009128 dnal1 (ENSNBRG00000009103) #22 ENSNBRG00000009099 ENSNBRG00000009079 ENSNBRG00000009062 ENSNBRG00000009049 xylt1 (ENSNBRG00000009021) kat8 (ENSNBRG00000008981) rnf25 (ENSNBRG00000008960) ENSNBRG00000008930 anapc2 (ENSNBRG00000008794) arl6ip1 (ENSNBRG00000008753) fus (ENSNBRG00000008712) Haplochromini ANCESTRAL SPECIES 12 ENSGT00390000012364.a ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT00390000016904.x #22 ENSGT00940000164445.r ENSGT00940000163496.a.q ENSGT00940000164445.q.b ENSGT00940000157381.d ENSGT00940000159512 ENSGT00390000001557 ENSGT00390000016127 ENSGT00940000166574 ENSGT00940000167070 ENSGT00940000154937 ENSGT00940000157290 ENSGT00940000163009.b.a.a.b.b.`b.b.b ENSGT00940000163852.c.b.e.a ENSGT00940000163009.b.a.a.b.b.`b.a ENSGT00940000163852.c.b.e.b.a Burton s mouthbrooder MODERN SPECIES 332 crlf3 (ENSHBUG00000018428) ENSHBUG00000018471 nde1 (ENSHBUG00000018501) ENSHBUG00000018598 ENSHBUG00000018607 gsg1l (ENSHBUG00000018612) ENSHBUG00000018626 flr (ENSHBUG00000018686) si:ch211-76l23.7 (ENSHBUG00000018701) eef2kmt (ENSHBUG00000018733) alg1 (ENSHBUG00000000559) pigq (ENSHBUG00000018854) rab40c (ENSHBUG00000018881) ENSHBUG00000018885 ENSHBUG00000018905 dnal1 (ENSHBUG00000018923) #22 ENSHBUG00000018939 ENSHBUG00000018942 xylt1 (ENSHBUG00000018978) kat8 (ENSHBUG00000000951) rnf25 (ENSHBUG00000019014) anapc2 (ENSHBUG00000019229) ENSHBUG00000019261 srrm2 (ENSHBUG00000019295) arl6ip1 (ENSHBUG00000019325) fus (ENSHBUG00000019348) ENSHBUG00000019371 Haplochromini_A ANCESTRAL SPECIES 33 ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT00940000179817 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT00950000183052.b.c.b.b.a.a.b.a.b.a ENSGT01100000263505.b.b.a.b.a.a.a.a ENSGT00390000016904.x #22 ENSGT00940000164445.r ENSGT00940000163496.a.q ENSGT00940000164445.q.b ENSGT00940000157381.d ENSGT00940000159512 ENSGT00390000001557 ENSGT00390000016127 ENSGT00940000166574 ENSGT00940000167070 ENSGT00940000154937 ENSGT00940000157290 ENSGT00940000163009.b.a.a.b.b.`b.b.b ENSGT00940000163852.c.b.e.a.b ENSGT00940000163009.b.a.a.b.b.`b.a ENSGT00940000163852.c.b.e.b.a P. nyererei MODERN SPECIES 390 crlf3 (ENSPNYG00000010132) ENSPNYG00000010115 nde1 (ENSPNYG00000010098) ENSPNYG00000010014 ENSPNYG00000009991 ENSPNYG00000009975 gsg1l (ENSPNYG00000009961) ENSPNYG00000009949 flr (ENSPNYG00000009919) si:ch211-76l23.7 (ENSPNYG00000009878) alg1 (ENSPNYG00000009837) eef2kmt (ENSPNYG00000009806) pigq (ENSPNYG00000009739) rab40c (ENSPNYG00000009720) ENSPNYG00000009700 dnal1 (ENSPNYG00000009676) #22 ENSPNYG00000009654 ENSPNYG00000009627 xylt1 (ENSPNYG00000009598) kat8 (ENSPNYG00000009561) rnf25 (ENSPNYG00000009551) anapc2 (ENSPNYG00000009521) ENSPNYG00000009490 ENSPNYG00000009463 arl6ip1 (ENSPNYG00000009442) Haplochromini_B ANCESTRAL SPECIES 43 ENSGT00940000153469.a.b ENSGT00730000111088.b ENSGT00390000000111.b.a.b ENSGT00940000155421.a.b ENSGT00940000166624 ENSGT00940000179817 ENSGT01050000244814.a.a.a.a.a.a ENSGT00410000026495.A ENSGT00390000010116 ENSGT00390000013433 ENSGT00390000008647 ENSGT00940000164788 ENSGT00390000004994 ENSGT00940000158979.e.a ENSGT01100000263505.b.b.a.b.a.a.a.a ENSGT00390000016904.x #22 ENSGT00940000164445.r ENSGT00940000163496.a.q ENSGT00940000164445.q.b ENSGT00940000157381.d ENSGT00940000159512 ENSGT00390000001557 ENSGT00390000016127 ENSGT00940000166574 ENSGT00940000167070 ENSGT00940000154937 ENSGT00940000157290 ENSGT00940000163852.c.b.e.a.a ENSGT00940000177501 ENSGT00940000163009.b.a.a.b.b.`b.b.b.c ENSGT00940000163852.c.b.e.b.b.a.a Eastern happy MODERN SPECIES 16 nde1 (ENSACLG00000019623) ENSACLG00000019525 ENSACLG00000019511 ENSACLG00000019495 ENSACLG00000019490 gsg1l (ENSACLG00000019474) ENSACLG00000019407 flr (ENSACLG00000019339) ENSACLG00000019327 si:ch211-76l23.7 (ENSACLG00000019287) alg1 (ENSACLG00000019264) eef2kmt (ENSACLG00000019218) pigq (ENSACLG00000019132) rab40c (ENSACLG00000019102) ENSACLG00000019094 dnal1 (ENSACLG00000019079) #22 ENSACLG00000019059 gig2d (ENSACLG00000019044) ENSACLG00000019036 xylt1 (ENSACLG00000019009) kat8 (ENSACLG00000018964) rnf25 (ENSACLG00000018943) anapc2 (ENSACLG00000018745) ENSACLG00000018721 srrm2 (ENSACLG00000018660) arl6ip1 (ENSACLG00000018629) fus (ENSACLG00000018610) zgc:100868 (ENSACLG00000018495) ENSACLG00000018476 zgc:100868 (ENSACLG00000018385) zgc:100868 (ENSACLG00000018337) Zebra mbuna MODERN SPECIES 1107 mettl23 (ENSMZEG00005002693) ENSMZEG00005002685 ENSMZEG00005002683 ENSMZEG00005002676 ENSMZEG00005002666 ENSMZEG00005002648 gsg1l (ENSMZEG00005002609) ENSMZEG00005002594 flr (ENSMZEG00005002536) si:ch211-76l23.7 (ENSMZEG00005002497) alg1 (ENSMZEG00005002474) eef2kmt (ENSMZEG00005002454) pigq (ENSMZEG00005002427) rab40c (ENSMZEG00005002405) ENSMZEG00005002397 DNAL1 (ENSMZEG00005002357) #22 ENSMZEG00005002350 ENSMZEG00005002337 ENSMZEG00005002335 xylt1 (ENSMZEG00005002310) kat8 (ENSMZEG00005002275) rnf25 (ENSMZEG00005002270) anapc2 (ENSMZEG00005002112) ENSMZEG00005002081 ENSMZEG00005002069 arl6ip1 (ENSMZEG00005002049) fus (ENSMZEG00005002034) ENSMZEG00005002020 ENSMZEG00005002000 ENSMZEG00005001984 zgc:100868 (ENSMZEG00005001938) Nile tilapia MODERN SPECIES 16 ENSONIG00000038321 nde1 (ENSONIG00000009530) ENSONIG00000009489 ENSONIG00000036473 ENSONIG00000039710 ENSONIG00000009488 ENSONIG00000024229 flr (ENSONIG00000009478) si:ch211-76l23.7 (ENSONIG00000009475) alg1 (ENSONIG00000009470) eef2kmt (ENSONIG00000009469) pigq (ENSONIG00000009465) ENSONIG00000021378 rab40c (ENSONIG00000009462) ENSONIG00000041910 DNAL1 (ENSONIG00000032647) #22 ENSONIG00000009460 ENSONIG00000041243 xylt1 (ENSONIG00000009456) kat8 (ENSONIG00000009451) ENSONIG00000043165 anapc2 (ENSONIG00000009445) ENSONIG00000009443 srrm2 (ENSONIG00000030912) arl6ip1 (ENSONIG00000033742) zgc:100868 (ENSONIG00000009438) ENSONIG00000028968 ENSONIG00000009434 ENSONIG00000040126 ENSONIG00000027143 ENSONIG00000009435 Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00940000153798.A.a ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 ENSGT00940000162596 ENSGT00390000008624 ENSGT00940000165313 ENSGT00390000012397 Nile tilapia MODERN SPECIES 10 ankrd9 (ENSONIG00000013877) ENSONIG00000039708 ENSONIG00000029842 ENSONIG00000032711 ##23 ENSONIG00000032713 ENSONIG00000040662 ENSONIG00000028341 ENSONIG00000033908 CCR6 (ENSONIG00000039364) PXDN (ENSONIG00000011663) MYT1L (ENSONIG00000011665) ENSONIG00000034567 eipr1 (ENSONIG00000011672) trappc12 (ENSONIG00000011676) adi1 (ENSONIG00000011677) DNAL1 (ENSONIG00000011679) #22 pth2 (ENSONIG00000011680) ENSONIG00000011681 ENSONIG00000011682 ENSONIG00000034374 slirp (ENSONIG00000035467) alkbh1 (ENSONIG00000038544) GDF7 (ENSONIG00000011696) ldah (ENSONIG00000011698) APOB (ENSONIG00000011699) DGLUCY (ENSONIG00000011704) ENSONIG00000038519 GPR68 (ENSONIG00000011710) ENSONIG00000011722 ccdc88c (ENSONIG00000011715) PALS1 (ENSONIG00000011723) Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000161983.a ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT01030000234592.A.b.a ENSGT00390000017365.b.bc.a.a ENSGT00940000154785.A Haplochromini ANCESTRAL SPECIES 7 ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.C ENSGT01030000234592.A.b.a ENSGT00390000017365.b.bc.a.a.c Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00940000155634.q.a ENSGT00940000156483.h.a ENSGT00940000155727.o.a ENSGT00550000074866 ENSGT00880000138028.b.b ENSGT00940000155695.i.b.b ENSGT00950000183007.b.f.b.a.a.a.b ENSGT00950000183007.b.f.b.a.a.a.a.b.b.b.a ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.C ENSGT00940000154785.A ENSGT00940000156087.b Haplochromini_B ANCESTRAL SPECIES 80 ENSGT00950000183007.b.f.b.a.a.a.a.a.b.a.a.a ENSGT01030000234667.b.f.b ENSGT00940000157666 ENSGT00940000155671.y.a ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000016904.y #22 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00940000165313.f ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b.s ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00940000154785.A ENSGT00940000156087.b.e ENSGT00940000165313.e ENSGT00390000012397 ENSGT00950000183181.B.a Zebra mbuna MODERN SPECIES 1101 ENSMZEG00005003558 ENSMZEG00005003567 ENSMZEG00005003591 ENSMZEG00005003660 ENSMZEG00005003829 ENSMZEG00005003854 ENSMZEG00005003870 ENSMZEG00005003910 ENSMZEG00005003945 CCR6 (ENSMZEG00005003972) PXDN (ENSMZEG00005004087) MYT1L (ENSMZEG00005004218) eipr1 (ENSMZEG00005004333) trappc12 (ENSMZEG00005004380) adi1 (ENSMZEG00005004422) DNAL1 (ENSMZEG00005004431) #22 pth2 (ENSMZEG00005004462) ENSMZEG00005004474 ENSMZEG00005004520 ENSMZEG00005004601 slirp (ENSMZEG00005004617) alkbh1 (ENSMZEG00005004627) GDF7 (ENSMZEG00005004695) ldah (ENSMZEG00005004738) APOB (ENSMZEG00005004759) DGLUCY (ENSMZEG00005004794) GPR68 (ENSMZEG00005004820) ccdc88c (ENSMZEG00005004839) ENSMZEG00005004906 PALS1 (ENSMZEG00005004910) timm9 (ENSMZEG00005004940) Midas cichlid MODERN SPECIES 223 crlf3 (ENSACIG00000017938) ENSACIG00000017961 nde1 (ENSACIG00000017994) ENSACIG00000018028 ENSACIG00000018111 ENSACIG00000018128 gsg1l (ENSACIG00000018144) ENSACIG00000018183 flr (ENSACIG00000018196) si:ch211-76l23.7 (ENSACIG00000018234) alg1 (ENSACIG00000018259) eef2kmt (ENSACIG00000018339) pigq (ENSACIG00000018363) rab40c (ENSACIG00000018394) ENSACIG00000018404 dnal1 (ENSACIG00000018416) #22 ENSACIG00000018444 ENSACIG00000018452 Pomacentridae ANCESTRAL SPECIES 102 ENSGT00940000153577.B ENSGT00940000154482.b.b.b ENSGT00940000154618 ENSGT00990000204009 ENSGT00940000158221 ENSGT00940000164656.b.a.d ENSGT00390000008624 ENSGT00390000004599 ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00390000016577.a.c ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Pomacentridae_A ANCESTRAL SPECIES 103 ENSGT00940000154482.b.b.b ENSGT00940000154618 ENSGT00990000204009 ENSGT00940000158221 ENSGT00940000164656.b.a.d ENSGT00390000008624 ENSGT00390000004599 ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156231.o.a.g.m.a.b ENSGT00940000156087.b ENSGT00390000016577.a.c ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Amphiprion ANCESTRAL SPECIES 68 ENSGT00590000083139.c.j ENSGT00390000002237 ENSGT00940000177031.C ENSGT00950000183136.a.a ENSGT00940000154785.A ENSGT00940000156231.o.a.g.m.a.b ENSGT00940000156087.b ENSGT00390000016577.a.c ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00950000182865.b.a.b.b.a.a.b.b.q.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 Clown anemonefish MODERN SPECIES 1146 RASSF9 (ENSAOCG00000017463) NTS (ENSAOCG00000017457) MGAT4C (ENSAOCG00000001219) ENSAOCG00000017412 MTPAP (ENSAOCG00000017390) MAP3K8 (ENSAOCG00000017379) ENSAOCG00000017334 dnal1 (ENSAOCG00000017325) #22 ENSAOCG00000017279 pth2 (ENSAOCG00000001203) ENSAOCG00000017246 Orange clownfish MODERN SPECIES 9 ENSAPEG00000005701 ENSAPEG00000005636 ENSAPEG00000005625 ENSAPEG00000005608 ENSAPEG00000005583 ENSAPEG00000005569 ENSAPEG00000005544 ENSAPEG00000005526 GPR68 (ENSAPEG00000005481) ENSAPEG00000005320 ENSAPEG00000005300 ENSAPEG00000005202 CEL (ENSAPEG00000004760) PALS1 (ENSAPEG00000004649) ENSAPEG00000004524 dnal1 (ENSAPEG00000004463) #22 ENSAPEG00000004447 pth2 (ENSAPEG00000004425) ENSAPEG00000004379 adi1 (ENSAPEG00000004357) trappc12 (ENSAPEG00000004266) eipr1 (ENSAPEG00000004214) MYT1L (ENSAPEG00000004104) PXDN (ENSAPEG00000003984) CCR6 (ENSAPEG00000003960) ENSAPEG00000003944 ENSAPEG00000003820 rtn4ip1 (ENSAPEG00000003768) qrsl1 (ENSAPEG00000003719) ENSAPEG00000003661 iars2 (ENSAPEG00000003588) Spiny chromis MODERN SPECIES 134 pex11g (ENSAPOG00000022944) ENSAPOG00000022984 ENSAPOG00000022999 ENSAPOG00000023029 slc35e1 (ENSAPOG00000023056) MED26 (ENSAPOG00000023070) smim7 (ENSAPOG00000023100) tmem38a (ENSAPOG00000023140) comp (ENSAPOG00000023189) CRTC1 (ENSAPOG00000023262) klhl26 (ENSAPOG00000023285) ENSAPOG00000023310 ENSAPOG00000023351 PALS1 (ENSAPOG00000023551) ENSAPOG00000023736 dnal1 (ENSAPOG00000023774) #22 pth2 (ENSAPOG00000023791) ENSAPOG00000023824 adi1 (ENSAPOG00000023840) ENSAPOG00000023857 trappc12 (ENSAPOG00000023895) Tiger tail seahorse MODERN SPECIES 41 rab3gap2 (ENSHCOG00000001385) kcnk5a (ENSHCOG00000001328) ENSHCOG00000001322 KCNK16 (ENSHCOG00000001316) kif6 (ENSHCOG00000001310) DAAM2 (ENSHCOG00000001299) kcns3a (ENSHCOG00000001284) kcns3a (ENSHCOG00000001279) ENSHCOG00000001276 DGLUCY (ENSHCOG00000001254) GPR68 (ENSHCOG00000001236) ENSHCOG00000001222 ENSHCOG00000001217 PALS1 (ENSHCOG00000001207) ENSHCOG00000001189 dnal1 (ENSHCOG00000001180) #22 ENSHCOG00000001175 gjb9a (ENSHCOG00000001171) ENSHCOG00000001165 wdr43 (ENSHCOG00000001160) Pinecone sodierfish MODERN SPECIES 14 ENSMMDG00005012904 ldah (ENSMMDG00005012898) APOB (ENSMMDG00005012804) ENSMMDG00005012789 ENSMMDG00005012787 ENSMMDG00005012784 ccdc88c (ENSMMDG00005010555) ENSMMDG00005010514 PALS1 (ENSMMDG00005010461) ENSMMDG00005009522 dnal1 (ENSMMDG00005009512) #22 pth2 (ENSMMDG00005009510) ENSMMDG00005009509 gjb9a (ENSMMDG00005009493) ENSMMDG00005009485 HHIPL1 (ENSMMDG00005009481) CCDC85C (ENSMMDG00005009479) ENSMMDG00005009477 CCNK (ENSMMDG00005009459) setd3 (ENSMMDG00005009432) BCL11B (ENSMMDG00005009416) vrk1 (ENSMMDG00005007439) ak7b (ENSMMDG00005007403) galcb (ENSMMDG00005007382) zgc:152658 (ENSMMDG00005007377) FLRT2 (ENSMMDG00005007376) Cod MODERN SPECIES 18 ENSGMOG00000024550 ENSGMOG00000030621 ENSGMOG00000030093 ENSGMOG00000027593 ENSGMOG00000015136 ENSGMOG00000018643 dnal1 (ENSGMOG00000018665) #22 ENSGMOG00000033867 ENSGMOG00000018704 gjb9a (ENSGMOG00000018713) ptp4a2a (ENSGMOG00000014649) ENSGMOG00000014655 ENSGMOG00000031014 ENSGMOG00000036152 ENSGMOG00000028255 sdsl (ENSGMOG00000002694) ENSGMOG00000002682 ENSGMOG00000022174 ENSGMOG00000034722 ENSGMOG00000002667 ENSGMOG00000028633 metap1 (ENSGMOG00000010213) Protacanthopterygii ANCESTRAL SPECIES 22 ENSGT00390000015102.a.b ENSGT00390000003303 ENSGT00940000158937.a ENSGT00940000160635 ENSGT00940000156287 ENSGT00940000159056.h ENSGT00440000039367 ENSGT00940000156864.c ENSGT00950000183031.A.a.b ENSGT00940000155887.a ENSGT00390000008198 ENSGT00390000007015.z ENSGT00940000156087.a.a ENSGT00390000016577.b.a ENSGT00530000063737.l.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a ENSGT00410000026259 ENSGT00940000158622 ENSGT00950000182843.a.a.a.a ENSGT00940000158908 ENSGT00940000164613 ENSGT00940000173788 ENSGT00940000163117 ENSGT00940000164449 ENSGT00940000165020.b ENSGT00390000016216 ENSGT00940000156793 #26 ENSGT00940000157459.b #24 ENSGT00940000158683.a.a.a.a.b Salmoninae ANCESTRAL SPECIES 607 ENSGT01010000230065 ENSGT00390000007015.z.a ENSGT00940000156087.a.a.d ENSGT00390000016577.b.a.f ENSGT00530000063737.l.b.f.a.a ENSGT00530000063737.l.b.f.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a.d ENSGT00410000026259.b ENSGT00940000158622.b ENSGT00950000182843.a.a.a.a.qb ENSGT00940000158908.l ENSGT00940000164613.d ENSGT00940000173788 Salmoninae_a ANCESTRAL SPECIES 8 ENSGT00940000153577.B.l ENSGT00940000161060.e.b ENSGT00990000211133 ENSGT00940000155554.f ENSGT00390000003303.d ENSGT00940000158937.a.d ENSGT00940000160635.a ENSGT00940000156287.c ENSGT00940000159056.h.d ENSGT00440000039367.b ENSGT00940000156864.c.f ENSGT00390000007015.z.a ENSGT00940000156087.a.a.d ENSGT00390000016577.b.a.f ENSGT00530000063737.l.b.f.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a.d ENSGT00410000026259.b ENSGT00940000158622.b ENSGT00950000182843.a.a.a.a.qb ENSGT00940000158908.l ENSGT00940000164613.d ENSGT00940000163117.c.b ENSGT00940000165020.b.d ENSGT00940000157459.b.d #24 ENSGT00940000158683.a.a.a.a.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a.r ENSGT00390000010899.a.a.h ENSGT00940000155076.a.d.d Oncorhynchus ANCESTRAL SPECIES 54 ENSGT00940000153577.B.l ENSGT00940000161060.e.b ENSGT00990000211133 ENSGT00940000155554.f ENSGT00390000003303.d ENSGT00940000158937.a.d ENSGT00940000160635.a ENSGT00940000156287.c ENSGT00940000159056.h.d ENSGT00440000039367.b ENSGT00940000156864.c.f ENSGT00390000007015.z.a ENSGT00940000156087.a.a.d ENSGT00390000016577.b.a.f ENSGT00530000063737.l.b.f.a.a ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a.d ENSGT00410000026259.b ENSGT00940000158622.b ENSGT00950000182843.a.a.a.a.qb ENSGT00940000158908.l ENSGT00940000164613.d ENSGT00940000163117.c.b ENSGT00940000165020.b.d ENSGT00940000157459.b.d #24 ENSGT01060000252721 ENSGT00940000158683.a.a.a.a.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a.r ENSGT00390000010899.a.a.h Rainbow trout MODERN SPECIES 17 ENSOMYG00000022940 vrk1 (ENSOMYG00000023026) galcb (ENSOMYG00000023158) ENSOMYG00000023257 gsc (ENSOMYG00000023283) dicer1 (ENSOMYG00000023628) ENSOMYG00000071319 ENSOMYG00000021210 ENSOMYG00000074803 ENSOMYG00000024035 gabrr2a (ENSOMYG00000024081) EIF2S1 (ENSOMYG00000024121) pals1a (ENSOMYG00000024244) gphna (ENSOMYG00000024896) fut8a (ENSOMYG00000025733) dnal1 (ENSOMYG00000025765) #22 ENSOMYG00000025806 ENSOMYG00000055437 pth2 (ENSOMYG00000036464) ENSOMYG00000036486 ENSOMYG00000036523 ENSOMYG00000036607 ENSOMYG00000057637 ENSOMYG00000071176 ENSOMYG00000036736 ENSOMYG00000036768 #24 ENSOMYG00000068526 crip2 (ENSOMYG00000063172) ENSOMYG00000070136 ENSOMYG00000036966 ENSOMYG00000045253 Oncorhynchus_a ANCESTRAL SPECIES 60 ENSGT00940000153577.B.l ENSGT00940000161060.e.b ENSGT00990000211133 ENSGT00940000155554.f ENSGT00390000003303.d ENSGT00940000158937.a.d ENSGT00940000160635.a ENSGT00940000156287.c ENSGT00940000159056.h.d ENSGT00440000039367.b ENSGT00940000156864.c.f ENSGT00390000007015.z.a ENSGT00940000156087.a.a.d ENSGT00390000016577.b.a.f ENSGT00530000063737.l.b.f.a.a ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a.d ENSGT00410000026259.b ENSGT00940000158622.b ENSGT00950000182843.a.a.a.a.qb ENSGT00940000158908.l ENSGT00940000173788 ENSGT00940000165020.b.d ENSGT00940000157459.b.d #24 ENSGT01060000252721 ENSGT00940000158683.a.a.a.a.b ENSGT01030000234573.B.d ENSGT01030000234573.B.c.a.r ENSGT00390000010899.a.a.h ENSGT00940000155076.a.d.d Chinook salmon MODERN SPECIES 32 crip2 (ENSOTSG00005006905) ENSOTSG00005006902 ENSOTSG00005006896 #24 vrk1 (ENSOTSG00005005089) galcb (ENSOTSG00005004493) FLRT2 (ENSOTSG00005004490) gsc (ENSOTSG00005004486) dicer1 (ENSOTSG00005004434) syne3 (ENSOTSG00005004429) gabrr2a (ENSOTSG00005004428) EIF2S1 (ENSOTSG00005004427) pals1a (ENSOTSG00005004049) gphna (ENSOTSG00005003432) ENSOTSG00005003417 fut8a (ENSOTSG00005003416) dnal1 (ENSOTSG00005003411) #22 ENSOTSG00005003410 TMEM121 (ENSOTSG00005003408) pth2 (ENSOTSG00005003407) RIN3 (ENSOTSG00005003403) ENSOTSG00005003402 sptb (ENSOTSG00005002886) ENSOTSG00005002832 ENSOTSG00005002799 ENSOTSG00005002788 setd3 (ENSOTSG00005002744) ccdc85ca (ENSOTSG00005002730) HHIPL1 (ENSOTSG00005001326) lrrc57 (ENSOTSG00005001305) tyro3 (ENSOTSG00005001276) ENSOTSG00005001243 Coho salmon MODERN SPECIES 5 BCL11B (ENSOKIG00005050158) ENSOKIG00005050157 vrk1 (ENSOKIG00005050046) FLRT2 (ENSOKIG00005050020) GSC (ENSOKIG00005050017) dicer1 (ENSOKIG00005049936) ENSOKIG00005049909 ENSOKIG00005049902 gabrr2a (ENSOKIG00005049898) ENSOKIG00005049895 ENSOKIG00005049893 EIF2S1 (ENSOKIG00005049889) pals1a (ENSOKIG00005049847) gphna (ENSOKIG00005049643) fut8a (ENSOKIG00005049583) dnal1 (ENSOKIG00005049562) #22 ENSOKIG00005049551 TMEM121 (ENSOKIG00005049550) pth2 (ENSOKIG00005049546) ENSOKIG00005049545 ENSOKIG00005049537 ENSOKIG00005049411 ENSOKIG00005049388 ENSOKIG00005049381 SPTB (ENSOKIG00005049314) ENSOKIG00005049264 ENSOKIG00005049256 ENSOKIG00005049250 #24 ENSOKIG00005049237 crip2 (ENSOKIG00005049220) ENSOKIG00005048582 Salmo ANCESTRAL SPECIES 11 ENSGT00940000161060.f ENSGT00940000161060.e.b ENSGT00990000211133 ENSGT00940000155554.f ENSGT00390000003303.d ENSGT00940000158937.a.d ENSGT00940000160635.a ENSGT00940000156287.c ENSGT00940000159056.h.d ENSGT00440000039367.b ENSGT00940000156864.c.f ENSGT00390000007015.z.a ENSGT00940000156087.a.a.d ENSGT00390000016577.b.a.f ENSGT00530000063737.l.b.f.b ENSGT00390000016904 #22 ENSGT00940000168283 ENSGT00390000003866.a.b.a.d ENSGT00410000026259.b ENSGT00940000158622.b ENSGT00950000182843.a.a.a.a.qb ENSGT00940000158908.l ENSGT00940000163117.c.b ENSGT00940000165020.b.d ENSGT00940000157459.b.d #24 ENSGT00940000158683.a.a.a.a.b ENSGT01030000234573.B.c.a.r ENSGT00390000010899.a.a.h ENSGT00940000155076.a.d.d ENSGT00940000159456.d ENSGT00730000111119.d River trout MODERN SPECIES 17 vrk1 (ENSSTUG00000027977) galcb (ENSSTUG00000027937) FLRT2 (ENSSTUG00000027935) ENSSTUG00000027926 gsc (ENSSTUG00000027920) dicer1 (ENSSTUG00000023588) CLMN (ENSSTUG00000023476) syne3 (ENSSTUG00000023430) ENSSTUG00000023426 gabrr2a (ENSSTUG00000023384) ENSSTUG00000023378 EIF2S1 (ENSSTUG00000023357) pals1a (ENSSTUG00000022878) gphna (ENSSTUG00000022364) fut8a (ENSSTUG00000022242) dnal1 (ENSSTUG00000022189) #22 ENSSTUG00000022174 TMEM121 (ENSSTUG00000022162) pth2 (ENSSTUG00000022142) ENSSTUG00000022003 ENSSTUG00000021971 sptb (ENSSTUG00000020176) ENSSTUG00000020071 ENSSTUG00000020054 ENSSTUG00000020016 #24 crip2 (ENSSTUG00000019947) MTA1 (ENSSTUG00000016073) ENSSTUG00000015977 zfp36l1a (ENSSTUG00000015974) plekhh1 (ENSSTUG00000015313) slc25a21 (ENSSTUG00000015281) Atlantic salmon MODERN SPECIES 28 vrk1 (ENSSSAG00000072004) galcb (ENSSSAG00000071989) ENSSSAG00000072022 ENSSSAG00000116745 gsc (ENSSSAG00000084092) ENSSSAG00000090568 ENSSSAG00000104435 dicer1 (ENSSSAG00000002403) ENSSSAG00000002943 SYNE3 (ENSSSAG00000002970) gabrr2a (ENSSSAG00000003030) eif2s1a (ENSSSAG00000003069) pals1a (ENSSSAG00000003099) gphna (ENSSSAG00000003309) fut8a (ENSSSAG00000099129) dnal1 (ENSSSAG00000007995) #22 ENSSSAG00000004456 pth2 (ENSSSAG00000004466) ENSSSAG00000004489 ENSSSAG00000004623 ENSSSAG00000005536 ENSSSAG00000063810 ENSSSAG00000063812 ENSSSAG00000063824 ENSSSAG00000063848 #24 ENSSSAG00000063855 crip2 (ENSSSAG00000063864) ENSSSAG00000063876 tmem229b (ENSSSAG00000095394) ENSSSAG00000115222 zfp36l1a (ENSSSAG00000093103) Huchen MODERN SPECIES 990 rps29 (ENSHHUG00000041444) mgat2 (ENSHHUG00000041455) ENSHHUG00000041457 ENSHHUG00000041462 dnal1 (ENSHHUG00000041481) #22 ENSHHUG00000041529 Northern pike MODERN SPECIES 14 FLRT2 (ENSELUG00000026146) ENSELUG00000032041 ENSELUG00000027203 gsc (ENSELUG00000024332) dicer1 (ENSELUG00000024317) ENSELUG00000001021 syne3 (ENSELUG00000024170) gabrr2a (ENSELUG00000023989) rragd (ENSELUG00000023959) ANKRD6 (ENSELUG00000023935) ENSELUG00000023922 EIF2S1 (ENSELUG00000023906) pals1a (ENSELUG00000023859) gphna (ENSELUG00000023773) fut8a (ENSELUG00000023582) dnal1 (ENSELUG00000023488) #22 TMEM121 (ENSELUG00000023448) pth2 (ENSELUG00000023433) RIN3 (ENSELUG00000023423) snap23.1 (ENSELUG00000023401) sptb (ENSELUG00000023298) ENSELUG00000022972 ENSELUG00000031429 ENSELUG00000022934 ENSELUG00000022899 TMEM62 (ENSELUG00000022761) ptgr2 (ENSELUG00000022820) #26 ENSELUG00000022738 #24 ENSELUG00000022690 crip2 (ENSELUG00000022624) MTA1 (ENSELUG00000022518) Osteoglossiformes ANCESTRAL SPECIES 4 ENSGT00950000185492 ENSGT00390000016904 #22 ENSGT00910000145250 ENSGT00390000011474 ENSGT00390000003866.a.b.d ENSGT00410000026259 ENSGT00940000158622.g ENSGT01030000234532.A.a.b.b ENSGT00940000160910.c ENSGT00950000183096.a.a.d ENSGT00940000154928.c.a.a ENSGT00940000155500.e ENSGT00950000183149.C.a ENSGT00940000157136.a ENSGT01030000235144 ENSGT00940000156618.c.b ENSGT01030000234597.a.b.a.a P. kingsleyae MODERN SPECIES 212 ENSPKIG00000014219 smek1 (ENSPKIG00000014120) atp6v1d (ENSPKIG00000014028) pals1a (ENSPKIG00000013926) gphnb (ENSPKIG00000013685) FUT8 (ENSPKIG00000013491) dnal1 (ENSPKIG00000013385) #22 ENSPKIG00000013359 TMEM121 (ENSPKIG00000013332) pth2 (ENSPKIG00000013306) ENSPKIG00000013286 slc24a4a (ENSPKIG00000013241) crim1 (ENSPKIG00000013091) zgc:174356 (ENSPKIG00000013021) hmbox1a (ENSPKIG00000012958) KIF13B (ENSPKIG00000012705) znf395a (ENSPKIG00000012613) RFTN1 (ENSPKIG00000012571) oxnad1 (ENSPKIG00000012530) GALNT15 (ENSPKIG00000012470) GPNMB (ENSPKIG00000012418) igf2bp3 (ENSPKIG00000012340) Asian bonytongue MODERN SPECIES 6 NKX2-8 (ENSSFOG00015020503) nkx2.1 (ENSSFOG00015024731) mbip (ENSSFOG00015020452) RPS6KA5 (ENSSFOG00015020427) DGLUCY (ENSSFOG00015020352) GPR68 (ENSSFOG00015020336) ccdc88c (ENSSFOG00015020308) smek1 (ENSSFOG00015020267) eif2s1b (ENSSFOG00015002443) atp6v1d (ENSSFOG00015020213) pals1a (ENSSFOG00015020171) ENSSFOG00015020158 FUT8 (ENSSFOG00015002277) gphnb (ENSSFOG00015019944) ENSSFOG00015026448 dnal1 (ENSSFOG00015019892) #22 ENSSFOG00015025648 TMEM121 (ENSSFOG00015019877) pth2 (ENSSFOG00015019869) RIN3 (ENSSFOG00015019850) slc24a4a (ENSSFOG00015019809) crim1 (ENSSFOG00015019763) hmbox1a (ENSSFOG00015019704) KIF13B (ENSSFOG00015019593) ENSSFOG00015030284 znf395a (ENSSFOG00015019512) ENSSFOG00015019497 il17a/f1 (ENSSFOG00015019479) stmn4l (ENSSFOG00015019466) gpn1 (ENSSFOG00015019441) ENSSFOG00015019426 Elephant shark MODERN SPECIES 1513 xgb (ENSCMIG00000018137) ENSCMIG00000018139 ENSCMIG00000018141 ENSCMIG00000018143 ppp1r14d (ENSCMIG00000018147) CLEC18A (ENSCMIG00000018150) ENSCMIG00000018156 ENSCMIG00000018168 ENSCMIG00000018175 ENSCMIG00000018178 ENSCMIG00000018185 PLEKHD1 (ENSCMIG00000018204) slc39a9 (ENSCMIG00000018226) ERH (ENSCMIG00000018234) ENSCMIG00000018247 dnal1 (ENSCMIG00000018248) #22 ENSCMIG00000018249 #24 ptgr2 (ENSCMIG00000018253) #26 ENSCMIG00000018257 UBR1 (ENSCMIG00000018307) prph2lb (ENSCMIG00000018361) TTBK2 (ENSCMIG00000018370) ENSCMIG00000018377 ENSCMIG00000018380 ENSCMIG00000018381 ENSCMIG00000018382 ENSCMIG00000018383 ENSCMIG00000018389 numb (ENSCMIG00000018397) #15 PAPLN (ENSCMIG00000018410) #14 psen1 (ENSCMIG00000018415) #13 Cyclostomata ANCESTRAL SPECIES ENSGT00390000016904 #22 Hagfish MODERN SPECIES 328 ENSEBUG00000001059 ENSEBUG00000008619 ENSEBUG00000010891 ENSEBUG00000008384 ENSEBUG00000003794 ENSEBUG00000010209 ENSEBUG00000002884 ENSEBUG00000010326 ENSEBUG00000001458 ENSEBUG00000005672 rac3a (ENSEBUG00000004976) ENSEBUG00000003567 ENSEBUG00000009333 ENSEBUG00000007004 #22 ENSEBUG00000004360 get3 (ENSEBUG00000011082) ENSEBUG00000015553 ENSEBUG00000015933 ENSEBUG00000016486 ENSEBUG00000006460 PLK1 (ENSEBUG00000009778) ENSEBUG00000003040 ENSEBUG00000004180 SCYL1 (ENSEBUG00000015714) ENSEBUG00000016435 ENSEBUG00000016066 glo1 (ENSEBUG00000015785) ENSEBUG00000002954 Lamprey MODERN SPECIES 1099 STOML1 (ENSPMAG00000002669) dnal1 (ENSPMAG00000002677) #22 Ciona ANCESTRAL SPECIES 484 ENSGT00940000156620 ENSGT00940000156119 ENSGT00390000016904 #22 Ciona savignyi MODERN SPECIES 13 ENSCSAVG00000009148 ENSCSAVG00000009150 ENSCSAVG00000009152 ENSCSAVG00000009228 ENSCSAVG00000009239 ENSCSAVG00000009266 ENSCSAVG00000009270 ENSCSAVG00000009291 ENSCSAVG00000009294 ENSCSAVG00000009296 ENSCSAVG00000009306 ENSCSAVG00000009309 ENSCSAVG00000009312 ENSCSAVG00000009318 ENSCSAVG00000009320 ENSCSAVG00000009322 #22 ENSCSAVG00000009328 ENSCSAVG00000009330 ENSCSAVG00000009334 ENSCSAVG00000009335 ENSCSAVG00000009341 ENSCSAVG00000009342 ENSCSAVG00000009344 ENSCSAVG00000009348 ENSCSAVG00000009353 ENSCSAVG00000009355 ENSCSAVG00000009356 ENSCSAVG00000009358 ENSCSAVG00000009362 ENSCSAVG00000009364 ENSCSAVG00000009371 Ciona intestinalis MODERN SPECIES 127 ENSCING00000011709 ENSCING00000024220 ENSCING00000005979 ENSCING00000005976 ENSCING00000005974 ENSCING00000005972 ENSCING00000005970 ENSCING00000019318 ENSCING00000005964 ENSCING00000022199 ENSCING00000022645 ENSCING00000020459 ENSCING00000024619 ENSCING00000023395 ENSCING00000023781 dnal1 (ENSCING00000005688) #22 ENSCING00000005687 hsp70 (ENSCING00000005686) ENSCING00000011719 ENSCING00000005685