Clupeocephala	ANCESTRAL SPECIES	485											ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22
Euteleosteomorpha	ANCESTRAL SPECIES	30	ENSGT00940000154818	ENSGT00940000156615.a	ENSGT00940000160526	ENSGT00940000155016	ENSGT00390000003290	ENSGT00940000156334.a.b	ENSGT00390000005848	ENSGT00940000157275.a	ENSGT00940000156003.l.b	ENSGT01010000222336.b.a.b.a	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000163529	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00940000156878.i.b.b ##27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00390000003224.B	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b
Percomorphaceae	ANCESTRAL SPECIES	35	ENSGT00940000157983 #9	ENSGT01020000230616	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566 #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000159401.c	ENSGT00940000158780.e	ENSGT00940000163529	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31
Percomorphaceae_C	ANCESTRAL SPECIES	22	ENSGT00940000157983 #9	ENSGT01020000230616	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000163529	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Eupercaria	ANCESTRAL SPECIES	21	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Eupecaria_A	ANCESTRAL SPECIES	21	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000163529	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Perciformes	ANCESTRAL SPECIES	18	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000163529	ENSGT00940000156375 #24	ENSGT00390000013208 #25	ENSGT00390000016053 #26	ENSGT00940000156878.i.b.a.a #27	ENSGT00940000153772.A #28	ENSGT00390000005529.b	ENSGT00940000160974.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Cottioidei	ANCESTRAL SPECIES	55	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000163529	ENSGT00940000156375 #24	ENSGT00390000013208 #25	ENSGT00390000016053 #26	ENSGT00940000156878.i.b.a.a #27	ENSGT00940000153772.A #28	ENSGT00390000005529.b	ENSGT00940000167915.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b
Lumpfish	MODERN SPECIES	15	ENSCLMG00005018699 #7	cradd (ENSCLMG00005018700) #8	socs2 (ENSCLMG00005018701) #9	ncaph2 (ENSCLMG00005018702) #10	sco2 (ENSCLMG00005018704) #11	FLNC (ENSCLMG00005002811) #12	kcnd2 (ENSCLMG00005002899) #13	tspan12 (ENSCLMG00005002973) #14	ing3 (ENSCLMG00005003001) #15	wnt16 (ENSCLMG00005003179) #16	ENSCLMG00005003195 #17	stab2 (ENSCLMG00005003197) #18	ovch1 (ENSCLMG00005003199) #19	ENSCLMG00005003238 #20	ENSCLMG00005003242 #21	svopl (ENSCLMG00005003254) #22	mical3b (ENSCLMG00005003474) #23	lta4h (ENSCLMG00005003481) #24	atp6v1f (ENSCLMG00005004143) #25	lamtor4 (ENSCLMG00005004145) #26	zgc:77650 (ENSCLMG00005004146) #27	gcc1 (ENSCLMG00005004147) #28	ENSCLMG00005004149 #29	irf5 (ENSCLMG00005004179) #30	tnpo3 (ENSCLMG00005004198) #31	ENSCLMG00005005107 #32	ENSCLMG00005005108 #33	ENSCLMG00005005109 #34
Stickleback	MODERN SPECIES	591	eps8a (ENSGACG00000000619)	PTPRO (ENSGACG00000000623)	cradd (ENSGACG00000000634) #8	socs2 (ENSGACG00000000635) #9	ncaph2 (ENSGACG00000000636) #10	sco2 (ENSGACG00000000639) #11	ENSGACG00000000640	FLNC (ENSGACG00000000642) #12	kcnd2 (ENSGACG00000000650) #13	tspan12 (ENSGACG00000000652) #14	ing3 (ENSGACG00000000654) #15	ENSGACG00000000655	wnt16 (ENSGACG00000000657) #16	ovch1 (ENSGACG00000000658) #19	ENSGACG00000000660 #21	svopl (ENSGACG00000000662) #22	mical3b (ENSGACG00000000668) #23	ENSGACG00000000673	lta4h (ENSGACG00000000675) #24	atp6v1f (ENSGACG00000000683) #25	lamtor4 (ENSGACG00000000684) #26	arf5 (ENSGACG00000000686) #27	gcc1 (ENSGACG00000000688) #28	dennd6b (ENSGACG00000000689)	ENSGACG00000000693	irf5 (ENSGACG00000000695) #30	tnpo3 (ENSGACG00000000699) #31	opn1sw1 (ENSGACG00000000716)
Perciformes_a	ANCESTRAL SPECIES	58		ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00940000153588.a.a.a #12	ENSGT00940000159122.h	ENSGT00390000004323.a #11	ENSGT00390000014443 #10	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156375 #24	ENSGT00390000013208 #25	ENSGT00390000016053 #26	ENSGT00940000156878.i.b.a.a #27	ENSGT00940000153772.A #28	ENSGT00390000005529.b	ENSGT00940000160974.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Pike perch	MODERN SPECIES	253	ENSSLUG00000021665	ENSSLUG00000021660	ENSSLUG00000021657	sco2 (ENSSLUG00000021652) #11	ENSSLUG00000021647	kcnd2 (ENSSLUG00000021619) #13	tspan12 (ENSSLUG00000021610) #14	ing3 (ENSSLUG00000021599) #15	ENSSLUG00000021591	ENSSLUG00000021587	ENSSLUG00000021584	CPED1 (ENSSLUG00000021571)	wnt16 (ENSSLUG00000021565) #16	ovch1 (ENSSLUG00000021558) #19	parp12b (ENSSLUG00000021553) #20	svopl (ENSSLUG00000021536) #22	ENSSLUG00000021533 #23
Eupecaria_C	ANCESTRAL SPECIES	18	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	46	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01010000222360.E.d
Large yellow croaker	MODERN SPECIES	482	slc5a6a (ENSLCRG00005003545)	ENSLCRG00005003547	cradd (ENSLCRG00005003769) #8	socs2 (ENSLCRG00005003771) #9	ncaph2 (ENSLCRG00005003772) #10	sco2 (ENSLCRG00005003774) #11	ENSLCRG00005003775	kcnd2 (ENSLCRG00005004231) #13	tspan12 (ENSLCRG00005004235) #14	ing3 (ENSLCRG00005004237) #15	CPED1 (ENSLCRG00005004252)	wnt16 (ENSLCRG00005004268) #16	ovch1 (ENSLCRG00005004438) #19	parp12b (ENSLCRG00005004442) #20	ENSLCRG00005004448 #21	svopl (ENSLCRG00005004454) #22	mical3b (ENSLCRG00005004511) #23	lta4h (ENSLCRG00005004550) #24	dennd6b (ENSLCRG00005004610)	gcc1 (ENSLCRG00005005115) #28	ENSLCRG00005005116	lamtor4 (ENSLCRG00005005122) #26	atp6v1f (ENSLCRG00005005123) #25	ENSLCRG00005005124	ENSLCRG00005005126	IRF5 (ENSLCRG00005005127) #30	tnpo3 (ENSLCRG00005005130) #31	calua (ENSLCRG00005005328)	barhl1a (ENSLCRG00005005336)	QSOX2 (ENSLCRG00005005338)	ENSLCRG00005005339
Gilthead seabream	MODERN SPECIES	5	ENSSAUG00010017776	cradd (ENSSAUG00010017778) #8	socs2 (ENSSAUG00010017779) #9	ncaph2 (ENSSAUG00010017781) #10	sco2 (ENSSAUG00010017783) #11	FLNC (ENSSAUG00010017805) #12	ENSSAUG00010019210	tspan12 (ENSSAUG00010019215) #14	ing3 (ENSSAUG00010019230) #15	wnt16 (ENSSAUG00010019439) #16	stab2 (ENSSAUG00010001819) #18	ovch1 (ENSSAUG00010005449) #19	ENSSAUG00010005454	parp12b (ENSSAUG00010005456) #20	ENSSAUG00010005464 #21	svopl (ENSSAUG00010005481) #22	mical3b (ENSSAUG00010005511) #23	mical3b (ENSSAUG00010005514) #23	lta4h (ENSSAUG00010005528) #24	dennd6b (ENSSAUG00010005606)	gcc1 (ENSSAUG00010005679) #28	arf5 (ENSSAUG00010005680) #27	ENSSAUG00010005684	lamtor4 (ENSSAUG00010005685) #26	atp6v1f (ENSSAUG00010005687) #25	ENSSAUG00010005689	ENSSAUG00010005691	irf5 (ENSSAUG00010005695) #30	tnpo3 (ENSSAUG00010005710) #31	opn1sw1 (ENSSAUG00010005724)	calua (ENSSAUG00010005727)
Ballan wrasse	MODERN SPECIES	829							tspan12 (ENSLBEG00000014370) #14	ing3 (ENSLBEG00000014322) #15	CPED1 (ENSLBEG00000014285)	wnt16 (ENSLBEG00000014266) #16	ENSLBEG00000014209 #18	ENSLBEG00000014161 #18	ovch1 (ENSLBEG00000014110) #19	parp12b (ENSLBEG00000014053) #20	ENSLBEG00000013987 #21	svopl (ENSLBEG00000013894) #22
Tetraodontidae	ANCESTRAL SPECIES																	ENSGT00940000158632 #22
Tetraodon	MODERN SPECIES	26	ENSTNIG00000018149	ENSTNIG00000018150	AGL (ENSTNIG00000018151)	ENSTNIG00000018152	ENSTNIG00000018289	rpl18a (ENSTNIG00000002482)	xpot (ENSTNIG00000002483)	rtcb (ENSTNIG00000002484)	ING3 (ENSTNIG00000002485) #15	ing3 (ENSTNIG00000003452) #15	wnt16 (ENSTNIG00000003453) #16	ENSTNIG00000003454 #18	ENSTNIG00000002033 #18	ovch1 (ENSTNIG00000003455) #19	ENSTNIG00000003456 #21	svopl (ENSTNIG00000003457) #22	mical3b (ENSTNIG00000003458) #23	lta4h (ENSTNIG00000003351) #24	dennd6b (ENSTNIG00000003350)	gcc1 (ENSTNIG00000003349) #28	arf5 (ENSTNIG00000003348) #27	lamtor4 (ENSTNIG00000001997) #26	atp6v1f (ENSTNIG00000001217) #25	tnpo3 (ENSTNIG00000003347) #31	irf5 (ENSTNIG00000003346) #30	fbxo7 (ENSTNIG00000003345)	kiaa0930 (ENSTNIG00000003344)	nup50 (ENSTNIG00000003343)	KCNA1 (ENSTNIG00000002493)	KCNA5 (ENSTNIG00000000276)	ENSTNIG00000002494
Percomorphaceae_D	ANCESTRAL SPECIES	22	ENSGT00940000157983 #9	ENSGT01020000230616	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Anabantaria	ANCESTRAL SPECIES	27	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01010000222360.E.d
Zig-zag eel	MODERN SPECIES	15	cradd (ENSMAMG00000020862) #8	socs2 (ENSMAMG00000027551) #9	ncaph2 (ENSMAMG00000020866) #10	sco2 (ENSMAMG00000020874) #11	ENSMAMG00000020878	ENSMAMG00000020885 #12	kcnd2 (ENSMAMG00000020906) #13	tspan12 (ENSMAMG00000026832) #14	ing3 (ENSMAMG00000020912) #15	CPED1 (ENSMAMG00000020919)	wnt16 (ENSMAMG00000020921) #16	stab2 (ENSMAMG00000020926) #18	ENSMAMG00000020966 #19	parp12b (ENSMAMG00000021004) #20	ENSMAMG00000021019 #21	svopl (ENSMAMG00000021056) #22	ENSMAMG00000021076 #23	TNPO3 (ENSMAMG00000021096) #31	ENSMAMG00000021110 #30	ENSMAMG00000021123	ENSMAMG00000025000	ATP6V1F (ENSMAMG00000021154) #25	ARF5 (ENSMAMG00000021136)	ENSMAMG00000026551 #28	ENSMAMG00000021165 #24
Anabantoidei	ANCESTRAL SPECIES	21	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT01030000234601.n.a.a.b.a	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01100000265550	ENSGT01010000222360.E.d	ENSGT00530000063347.B #31	ENSGT00940000159926 #30
Climbing perch	DUPLICATION
Climbing perch	MODERN SPECIES	14	ENSATEG00000001513	ENSATEG00000001587 #12	kcnd2 (ENSATEG00000001819) #13	tspan12 (ENSATEG00000029209) #14	ing3 (ENSATEG00000001895) #15	ENSATEG00000026395	wnt16 (ENSATEG00000025535) #16	stab2 (ENSATEG00000001977) #18	ENSATEG00000026682	parp12b (ENSATEG00000002255) #20	ENSATEG00000028301	ENSATEG00000028819	ENSATEG00000002301 #21	svopl (ENSATEG00000002451) #22	ENSATEG00000002609 #21	ENSATEG00000002725 #22	mical3b (ENSATEG00000002867) #23	ENSATEG00000002930 #24	dennd6b (ENSATEG00000003035)	gcc1 (ENSATEG00000003047) #28	ARF5 (ENSATEG00000029228) #27	lamtor4 (ENSATEG00000003099) #26	atp6v1f (ENSATEG00000025550) #25	calua (ENSATEG00000003165)	ENSATEG00000003197 #31	irf5 (ENSATEG00000003337) #30
Siamese fighting fish	MODERN SPECIES	20	PTPRO (ENSBSLG00000003992)	cradd (ENSBSLG00000004438) #8	socs2 (ENSBSLG00000004439) #9	ncaph2 (ENSBSLG00000004443) #10	sco2 (ENSBSLG00000004451) #11	ENSBSLG00000004454	FLNC (ENSBSLG00000005062) #12	kcnd2 (ENSBSLG00000006069) #13	tspan12 (ENSBSLG00000006073) #14	ing3 (ENSBSLG00000006080) #15	ENSBSLG00000006338	wnt16 (ENSBSLG00000006520) #16	stab2 (ENSBSLG00000006731) #18	ENSBSLG00000007282	parp12b (ENSBSLG00000007288) #20	svopl (ENSBSLG00000007322) #22	ENSBSLG00000007385 #23	lta4h (ENSBSLG00000007403) #24	dennd6b (ENSBSLG00000007523)	gcc1 (ENSBSLG00000007578) #28	arf5 (ENSBSLG00000007583) #27	lamtor4 (ENSBSLG00000007598) #26	atp6v1f (ENSBSLG00000007601) #25	ENSBSLG00000007604	tnpo3 (ENSBSLG00000007612) #31	irf5 (ENSBSLG00000007660) #30	ENSBSLG00000007676	arrdc1a (ENSBSLG00000008125)	ZMAT4 (ENSBSLG00000008138)	tcima (ENSBSLG00000008148)	adam28 (ENSBSLG00000008182)
Carangaria	ANCESTRAL SPECIES	28	ENSGT00940000157983 #9	ENSGT01020000230616	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156375 #24	ENSGT00940000156878.i.b.a.a #27	ENSGT00940000153772.A #28	ENSGT00390000005529.b	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT01020000231185	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Seriola	ANCESTRAL SPECIES	104	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT01020000230616	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000177211.a.b	ENSGT00940000181598
Greater amberjack	MODERN SPECIES	85	cradd (ENSSDUG00000011973) #8	socs2 (ENSSDUG00000011967) #9	ncaph2 (ENSSDUG00000011924) #10	sco2 (ENSSDUG00000011906) #11	ENSSDUG00000011884	FLNC (ENSSDUG00000011793) #12	kcnd2 (ENSSDUG00000011772) #13	tspan12 (ENSSDUG00000011756) #14	ing3 (ENSSDUG00000011731) #15	wnt16 (ENSSDUG00000011687) #16	ENSSDUG00000011626 #18	ENSSDUG00000011596 #18	ovch1 (ENSSDUG00000011566) #19	parp12b (ENSSDUG00000011543) #20	ENSSDUG00000011529	svopl (ENSSDUG00000011494) #22	ENSSDUG00000011475 #23	ENSSDUG00000011467	ENSSDUG00000011460
Yellowtail amberjack	MODERN SPECIES	3283	rcn3 (ENSSLDG00000021409)	abat (ENSSLDG00000021468)	mettl22 (ENSSLDG00000021495)	hao1 (ENSSLDG00000021515)	smg1 (ENSSLDG00000021553)	fbxl16 (ENSSLDG00000021645)	ENSSLDG00000021664	tspan12 (ENSSLDG00000021681) #14	ing3 (ENSSLDG00000021685) #15	wnt16 (ENSSLDG00000021708) #16	stab2 (ENSSLDG00000021722) #18	ovch1 (ENSSLDG00000021785) #19	ENSSLDG00000021853	parp12b (ENSSLDG00000021861) #20	ENSSLDG00000001144 #21	svopl (ENSSLDG00000001162) #22	ENSSLDG00000001214 #23	ENSSLDG00000001244	ENSSLDG00000001345	ska1 (ENSSLDG00000001364)	ENSSLDG00000001381	ENSSLDG00000001405	KLHL25 (ENSSLDG00000001445)	ENSSLDG00000001523	ANO1 (ENSSLDG00000001538)	ENSSLDG00000001639	zgc:101566 (ENSSLDG00000001654)	CHST1 (ENSSLDG00000001664)	smpd3 (ENSSLDG00000001704)	ENSSLDG00000001714	ENSSLDG00000001741
Barramundi perch	MODERN SPECIES	564						tspan12 (ENSLCAG00010003209) #14	ing3 (ENSLCAG00010003201) #15	wnt16 (ENSLCAG00010003183) #16	stab2 (ENSLCAG00010003117) #18	ENSLCAG00010003110	ovch1 (ENSLCAG00010003105) #19	ENSLCAG00010003101 #19	ENSLCAG00010003097	parp12b (ENSLCAG00010003091) #20	ENSLCAG00010003078 #21	svopl (ENSLCAG00010003071) #22	mical3b (ENSLCAG00010003061) #23
Tongue sole	MODERN SPECIES	18	cradd (ENSCSEG00000003750) #8	cradd (ENSCSEG00000003747) #8	socs2 (ENSCSEG00000003743) #9	ENSCSEG00000003739	sco2 (ENSCSEG00000003737) #11	ENSCSEG00000003728	FLNC (ENSCSEG00000003696) #12	kcnd2 (ENSCSEG00000003689) #13	tspan12 (ENSCSEG00000003683) #14	ing3 (ENSCSEG00000003675) #15	wnt16 (ENSCSEG00000003672) #16	stab2 (ENSCSEG00000003642) #18	ENSCSEG00000003630 #18	ovch1 (ENSCSEG00000003609) #19	ENSCSEG00000003598	svopl (ENSCSEG00000003571) #22	ENSCSEG00000003562 #23	ENSCSEG00000003555	ENSCSEG00000003549	rab3ip (ENSCSEG00000003533)	ENSCSEG00000003529	UPF2 (ENSCSEG00000003520)	ENSCSEG00000003517	nup107 (ENSCSEG00000003449)	mdm2 (ENSCSEG00000003433)	plxnb2a.1 (ENSCSEG00000003408)	abcc9 (ENSCSEG00000003388)	kcnj8 (ENSCSEG00000003368)	ECHDC3 (ENSCSEG00000003360)	usp6nl (ENSCSEG00000003353)	celf2 (ENSCSEG00000003342)
Atherinomorphae	ANCESTRAL SPECIES	37														ENSGT00940000159122.h	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.f #23	ENSGT00940000163529	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01010000222360.E.d	ENSGT01030000234549.a.a.a.a.b	ENSGT00390000004323.a #11
Oryzias	ANCESTRAL SPECIES	20				ENSGT00940000153588.a.a.a #12	ENSGT00940000163017 #19	ENSGT00940000156566.d #18	ENSGT00940000157480 #16	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.f #23	ENSGT00940000177211.a.a	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT00940000157983 #9	ENSGT00390000014448 #8
Japanese Medaka HdrR	MODERN SPECIES	15	ENSORLG00000026269 #18	ENSORLG00000028346	ENSORLG00000029421 #18	wnt16 (ENSORLG00000018300) #16	CPED1 (ENSORLG00000025107)	ENSORLG00000023859	ing3 (ENSORLG00000023901) #15	ENSORLG00000022124	tspan12 (ENSORLG00000021979) #14	kcnd2 (ENSORLG00000021857) #13	sco2 (ENSORLG00000019958) #11	ncaph2 (ENSORLG00000019964) #10	ENSORLG00000024812	ENSORLG00000030249	ENSORLG00000029974 #21	svopl (ENSORLG00000019435) #22	ENSORLG00000023456 #23	ENSORLG00000021810 #23	ENSORLG00000026478	ENSORLG00000026298	lta4h (ENSORLG00000020578) #24	dennd6b (ENSORLG00000020574)	gcc1 (ENSORLG00000022380) #28	arf5 (ENSORLG00000020571) #27	lamtor4 (ENSORLG00000019289) #26	atp6v1f (ENSORLG00000018592) #25	ENSORLG00000020114	ENSORLG00000024325	irf5 (ENSORLG00000020118) #30	tnpo3 (ENSORLG00000029369) #31	opn1sw1 (ENSORLG00000019293)
Oryzias_b	ANCESTRAL SPECIES	19				ENSGT00940000153588.a.a.a #12	ENSGT00940000163017 #19	ENSGT00940000156566.d #18	ENSGT00940000157480 #16	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.f #23	ENSGT00940000177211.a.a	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT00940000157983 #9	ENSGT00390000014448 #8	ENSGT00940000160758	ENSGT00940000161105	ENSGT00440000035348
Cyprinodontiformes	ANCESTRAL SPECIES	117														ENSGT00940000159122.h	ENSGT00530000063472.a #21	ENSGT00940000158632 #22
Cyprinodontoidei	ANCESTRAL SPECIES	74	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT01020000230616	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT01010000222360.E.d	ENSGT01030000234549.a.a.a.a.b	ENSGT00530000063347.B #31	ENSGT00940000159926 #30	ENSGT00940000165748.a	ENSGT00940000160974.a	ENSGT00940000159122.h	ENSGT00530000063472.a #21	ENSGT00940000158632 #22
NAME_6	ANCESTRAL SPECIES	318			ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00940000153588.a.a.a #12	ENSGT00940000164581.A.a.b #20	ENSGT00940000156566.d #18	ENSGT00390000004323.a #11	ENSGT01010000222360.E.d	ENSGT01030000234549.a.a.a.a.b	ENSGT00530000063347.B #31	ENSGT00940000159926 #30	ENSGT00940000160974.a	ENSGT00940000159122.h	ENSGT00530000063472.a.e #21	ENSGT00940000158632 #22
Guppy	MODERN SPECIES		FLNC (ENSPREG00000019162) #12	socs2 (ENSPREG00000019251) #9	cradd (ENSPREG00000019284) #8	PTPRO (ENSPREG00000019338)	ncaph2 (ENSPREG00000019464) #10	sco2 (ENSPREG00000019483) #11	calua (ENSPREG00000019522)	opn1sw (ENSPREG00000019709)	tnpo3 (ENSPREG00000019847) #31	tnpo3 (ENSPREG00000000839) #31	irf5 (ENSPREG00000000909) #30	ENSPREG00000001046	ENSPREG00000001085	ENSPREG00000001116	ENSPREG00000001146 #21	svopl (ENSPREG00000001219) #22
Platyfish	MODERN SPECIES	8	wnt16 (ENSXMAG00000009523) #16	ing3 (ENSXMAG00000009535) #15	tspan12 (ENSXMAG00000000236) #14	kcnd2 (ENSXMAG00000019504) #13	ENSXMAG00000024480	sco2 (ENSXMAG00000019502) #11	opn1sw1 (ENSXMAG00000013088)	calua (ENSXMAG00000013096)	tnpo3 (ENSXMAG00000013062) #31	irf5 (ENSXMAG00000013056) #30	ENSXMAG00000013054	ENSXMAG00000013048	ENSXMAG00000013045	ENSXMAG00000013040 #21	ENSXMAG00000013039 #21	svopl (ENSXMAG00000013022) #22
NAME_4	ANCESTRAL SPECIES	208	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT01020000230616	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT01010000222360.E.d	ENSGT01030000234549.a.a.a.a.b	ENSGT00530000063347.B #31	ENSGT00940000159926 #30	ENSGT00940000165748.a	ENSGT00940000160974.a	ENSGT00940000159122.h	ENSGT00530000063472.a #21	ENSGT00940000158632 #22
Mummichog	MODERN SPECIES	2373	tspan12 (ENSFHEG00000012042) #14	ENSFHEG00000012052	kcnd2 (ENSFHEG00000012076) #13	ENSFHEG00000012086	sco2 (ENSFHEG00000012099) #11	ncaph2 (ENSFHEG00000012107) #10	calua (ENSFHEG00000012115)	opn1sw1 (ENSFHEG00000012300)	opn1sw1 (ENSFHEG00000012792)	tnpo3 (ENSFHEG00000012859) #31	irf5 (ENSFHEG00000012870) #30	ENSFHEG00000012888	ENSFHEG00000012930	ENSFHEG00000013050	ENSFHEG00000013346 #21	svopl (ENSFHEG00000013362) #22
Sheepshead minnow	MODERN SPECIES	513	ENSCVAG00000020670	C11orf98 (ENSCVAG00000020626)	pthlha (ENSCVAG00000020592)	lta4h (ENSCVAG00000020551) #24	ENSCVAG00000020519	ENSCVAG00000020489 #23	xpot (ENSCVAG00000020453)	rpl18a (ENSCVAG00000020360)	tnpo3 (ENSCVAG00000020285) #31	irf5 (ENSCVAG00000020118) #30	ENSCVAG00000020090	ENSCVAG00000020029	ENSCVAG00000019976	ENSCVAG00000019931 #21	ENSCVAG00000019902 #21	svopl (ENSCVAG00000019866) #22	opn1sw1 (ENSCVAG00000019796)	opn1sw1 (ENSCVAG00000019774)	calua (ENSCVAG00000019744)	sco2 (ENSCVAG00000019716) #11	ncaph2 (ENSCVAG00000019673) #10	ENSCVAG00000019603	ENSCVAG00000019576 ##13
Aplocheiloidei	ANCESTRAL SPECIES	471															ENSGT00530000063472.a #21	ENSGT00940000158632 #22
Turquoise killifish	MODERN SPECIES	933																svopl (ENSNFUG00015010742) #22
Ovalentaria_B	ANCESTRAL SPECIES	42	ENSGT00390000014448 #8	ENSGT00940000157983 #9	ENSGT00940000153588.a.a.a #12	ENSGT00940000159122.h	ENSGT00390000004323.a #11	ENSGT00390000014443 #10	ENSGT00940000155472.a.b.a.a #13	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.f #23	ENSGT00940000177211.a.b	ENSGT00940000155580.b.a.b.e.b #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Pseudocrenilabrinae	ANCESTRAL SPECIES	23	ENSGT00390000014448 #8	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT01100000263483.E.b.b.t	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.e.b #23	ENSGT00940000155580.b.a.b.e.a #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d	ENSGT00940000160040.B.a.b
Nile tilapia	MODERN SPECIES	8	crebl2 (ENSONIG00000007545)	gpr19 (ENSONIG00000020773)	ENSONIG00000042373	ENSONIG00000018710	ENSONIG00000018711	ENSONIG00000035088	ENSONIG00000020774	ENSONIG00000018712	tspan12 (ENSONIG00000007547) #14	ing3 (ENSONIG00000007549) #15	CPED1 (ENSONIG00000007555)	wnt16 (ENSONIG00000027358) #16	ovch1 (ENSONIG00000007573) #19	parp12b (ENSONIG00000007576) #20	ENSONIG00000034767 #21	svopl (ENSONIG00000007578) #22	mical3b (ENSONIG00000007581) #23	lta4h (ENSONIG00000007586) #24	dennd6b (ENSONIG00000027228)	gcc1 (ENSONIG00000040843) #28	arf5 (ENSONIG00000007594) #27	lamtor4 (ENSONIG00000038960) #26	atp6v1f (ENSONIG00000028240) #25	ENSONIG00000007597	irf5 (ENSONIG00000007600) #30	tnpo3 (ENSONIG00000007604) #31	opn1sw1 (ENSONIG00000007620)	calua (ENSONIG00000007615)	ENSONIG00000007621	ENSONIG00000032590	ENSONIG00000003673
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00940000157983 #9	ENSGT00390000014448 #8	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000157480 #16	ENSGT00940000156566.d.t #18	ENSGT00940000163017 #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.e.b #23	ENSGT00940000155580.b.a.b.e.a #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d	ENSGT00940000160040.B.a.b
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000180874	ENSGT00940000157480 #16	ENSGT00940000156566.d.t.b #18	ENSGT00940000163017.j #19	ENSGT00940000156566.d.s.b #18	ENSGT00940000163017.i.a #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.e.b #23	ENSGT00940000155580.b.a.b.e.a #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d	ENSGT00940000160040.B.a.b
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000180874	ENSGT00940000157480 #16	ENSGT00940000156566.d.t.b #18	ENSGT00940000163017.j #19	ENSGT00940000163017.i.a #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.e.b #23	ENSGT00940000155580.b.a.b.e.a #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d	ENSGT00940000160040.B.a.b
P. nyererei	MODERN SPECIES	352	FLNC (ENSPNYG00000022934) #12	socs2 (ENSPNYG00000022965) #9	ENSPNYG00000022975 #8	PTPRO (ENSPNYG00000022994)	eps8a (ENSPNYG00000023025)	dusp16 (ENSPNYG00000023033)	crebl2 (ENSPNYG00000023037)	gpr19 (ENSPNYG00000000688)	tspan12 (ENSPNYG00000000698) #14	ing3 (ENSPNYG00000000731) #15	wnt16 (ENSPNYG00000000777) #16	stab2 (ENSPNYG00000000817) #18	ovch1 (ENSPNYG00000001076) #19	parp12b (ENSPNYG00000001143) #20	ENSPNYG00000001198 #21	svopl (ENSPNYG00000001385) #22	ENSPNYG00000001497 #23	lta4h (ENSPNYG00000001536) #24	dennd6b (ENSPNYG00000001633)	gcc1 (ENSPNYG00000001649) #28	arf5 (ENSPNYG00000001663) #27	lamtor4 (ENSPNYG00000001694) #26	atp6v1f (ENSPNYG00000001709) #25	ENSPNYG00000001719	ENSPNYG00000001798	irf5 (ENSPNYG00000001892) #30	tnpo3 (ENSPNYG00000002349) #31	opn1sw1 (ENSPNYG00000002459)	calua (ENSPNYG00000002495)	ENSPNYG00000002536	ENSPNYG00000002574
Haplochromini_B	ANCESTRAL SPECIES	11	ENSGT00940000154814.b	ENSGT00940000156403.b	ENSGT00940000157164	ENSGT00390000005388	ENSGT00940000160365	ENSGT00510000047764 #14	ENSGT00940000156619 #15	ENSGT00390000015216	ENSGT00940000180874	ENSGT00940000157480 #16	ENSGT00940000156566.d.t.b #18	ENSGT00940000163017.i.b #19	ENSGT00940000163017.i.a #19	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.e.b #23	ENSGT00940000155580.b.a.b.e.a #23	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d	ENSGT00940000160040.B.a.b
Lyretail cichlid	MODERN SPECIES	291	socs2 (ENSNBRG00000017619) #9	ENSNBRG00000017690 #8	PTPRO (ENSNBRG00000017713)	eps8a (ENSNBRG00000017888)	dusp16 (ENSNBRG00000017937)	crebl2 (ENSNBRG00000017962)	gpr19 (ENSNBRG00000017972)	tspan12 (ENSNBRG00000017980) #14	ing3 (ENSNBRG00000018008) #15	wnt16 (ENSNBRG00000018048) #16	stab2 (ENSNBRG00000018108) #18	ENSNBRG00000018292 #18	ovch1 (ENSNBRG00000018322) #19	ENSNBRG00000018409 #20	ENSNBRG00000018480 #21	svopl (ENSNBRG00000018708) #22	ENSNBRG00000018736 #23	ENSNBRG00000018761 #23	lta4h (ENSNBRG00000018778) #24	dennd6b (ENSNBRG00000018813)	gcc1 (ENSNBRG00000018839) #28	arf5 (ENSNBRG00000018854) #27	lamtor4 (ENSNBRG00000018872) #26	atp6v1f (ENSNBRG00000018887) #25	ENSNBRG00000018904	ENSNBRG00000018931	irf5 (ENSNBRG00000018961) #30	tnpo3 (ENSNBRG00000019001) #31	opn1sw1 (ENSNBRG00000019094)	calua (ENSNBRG00000019126)	ENSNBRG00000019147
Midas cichlid	MODERN SPECIES	698														parp12b (ENSACIG00000005553) #20	ENSACIG00000005584 #21	svopl (ENSACIG00000005639) #22	ENSACIG00000005712 #23	ENSACIG00000005721 #23	ENSACIG00000005733	lta4h (ENSACIG00000005748) #24	dennd6b (ENSACIG00000005789)	gcc1 (ENSACIG00000005829) #28	arf5 (ENSACIG00000005843) #27	lamtor4 (ENSACIG00000005858) #26	atp6v1f (ENSACIG00000005873) #25	opn1sw1 (ENSACIG00000005879)	tnpo3 (ENSACIG00000005897) #31	irf5 (ENSACIG00000005937) #30	ENSACIG00000005951
Pomacentridae	ANCESTRAL SPECIES	75	ENSGT00390000001285.i	ENSGT01100000263504.a.b.b.b.b.y	ENSGT00990000203553.c.a.a.a.b.p.c.a	ENSGT00950000183089.c.b	ENSGT01010000222360.E.d	ENSGT01030000234549.a.a.a.a.b	ENSGT00530000063347.B #31	ENSGT00940000159926 #30	ENSGT00940000165748.a	ENSGT00940000160974.a	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.f #23	ENSGT00940000177211.a.b	ENSGT00940000156375 #24	ENSGT00530000063472.a #21	ENSGT00940000163017 #19	ENSGT00940000156566.c.a ##18	ENSGT00940000157480 #16	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12
Pomacentridae_A	ANCESTRAL SPECIES	59												ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.f #23	ENSGT00940000177211.a.b	ENSGT00940000156375 #24	ENSGT00530000063472.a #21	ENSGT00940000163017 #19	ENSGT00940000156566.c.a ##18	ENSGT00940000157480 #16	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12
Amphiprion	ANCESTRAL SPECIES	77												ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.a.a #27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.f #23	ENSGT00940000177211.a.b	ENSGT00940000156375 #24	ENSGT00530000063472.a #21	ENSGT00940000163017 #19	ENSGT00940000156566.c.a ##18	ENSGT00940000157480 #16	ENSGT01100000263527.b.b.a.a.b	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT00390000014443 #10	ENSGT00390000004323.a #11	ENSGT00940000159122.h	ENSGT00940000153588.a.a.a #12
Clown anemonefish	MODERN SPECIES	1113												gcc1 (ENSAOCG00000002088) #28	arf5 (ENSAOCG00000023329) #27	atp6v1f (ENSAOCG00000023315) #25	lamtor4 (ENSAOCG00000023306) #26	svopl (ENSAOCG00000023300) #22	ENSAOCG00000023283 #23	ENSAOCG00000002470	lta4h (ENSAOCG00000023250) #24	ENSAOCG00000023218 #21	ovch1 (ENSAOCG00000002469) #19
Orange clownfish	MODERN SPECIES	13	kiaa0930 (ENSAPEG00000024693)	rpl18a (ENSAPEG00000024678)	xpot (ENSAPEG00000024660)	rtcb (ENSAPEG00000024653)	fbxo7 (ENSAPEG00000024650)	ENSAPEG00000024647	nup50 (ENSAPEG00000024643)	ENSAPEG00000024640	ENSAPEG00000024636	ARHGAP8 (ENSAPEG00000024632)	KCNA1 (ENSAPEG00000024619)	gcc1 (ENSAPEG00000024617) #28	arf5 (ENSAPEG00000024614) #27	lamtor4 (ENSAPEG00000024609) #26	atp6v1f (ENSAPEG00000024605) #25	svopl (ENSAPEG00000024594) #22	ENSAPEG00000024588 #23	ENSAPEG00000024586 #23	ENSAPEG00000024582	lta4h (ENSAPEG00000024559) #24	ENSAPEG00000024545 #21	ENSAPEG00000024525	ENSAPEG00000024520 ##18	ENSAPEG00000024512 ##18	wnt16 (ENSAPEG00000024504) #16	ENSAPEG00000024502	ing3 (ENSAPEG00000024493) #15	tspan12 (ENSAPEG00000024481) #14	kcnd2 (ENSAPEG00000024473) #13	ncaph2 (ENSAPEG00000024465) #10	sco2 (ENSAPEG00000024462) #11
Spiny chromis	MODERN SPECIES	1822											etv4 (ENSAPOG00000001258)	gcc1 (ENSAPOG00000001264) #28	ENSAPOG00000001269	lamtor4 (ENSAPOG00000001271) #26	ENSAPOG00000001290	svopl (ENSAPOG00000001307) #22	ENSAPOG00000001314 #23	ENSAPOG00000001318	lta4h (ENSAPOG00000001326) #24	ENSAPOG00000001332 #21	xpot (ENSAPOG00000001362)	rpl18a (ENSAPOG00000001382)
Bicolor damselfish	MODERN SPECIES	1177		KCNMB4 (ENSSPAG00000013967)	CNOT2 (ENSSPAG00000013982)	ENSSPAG00000014037	calua (ENSSPAG00000014149)	opn1sw1 (ENSSPAG00000014174)	tnpo3 (ENSSPAG00000014209) #31	irf5 (ENSSPAG00000014262) #30	ENSSPAG00000014285	ENSSPAG00000014309	dennd6b (ENSSPAG00000014340)	gcc1 (ENSSPAG00000014427) #28	arf5 (ENSSPAG00000014434) #27	lamtor4 (ENSSPAG00000014458) #26	atp6v1f (ENSSPAG00000014471) #25	svopl (ENSSPAG00000014479) #22	ENSSPAG00000014504 #23	ENSSPAG00000014520 #23	lta4h (ENSSPAG00000014533) #24	ENSSPAG00000014598 #21	ovch1 (ENSSPAG00000014669) #19
Cod	MODERN SPECIES	17	ENSGMOG00000036441	ENSGMOG00000034305	ENSGMOG00000013933	ENSGMOG00000036571	ENSGMOG00000013948	ENSGMOG00000013965	ENSGMOG00000033668	ENSGMOG00000023088	ENSGMOG00000004515	ENSGMOG00000030025	ENSGMOG00000024971	ENSGMOG00000037146	ENSGMOG00000022711	parp12b (ENSGMOG00000035764) #20	ENSGMOG00000017598 #21	svopl (ENSGMOG00000017633) #22	mical3b (ENSGMOG00000017654) #23	ENSGMOG00000017711 #24	dennd6b (ENSGMOG00000008766)	gcc1 (ENSGMOG00000023680) #28	ENSGMOG00000008747 #27	lamtor4 (ENSGMOG00000008743) #26	atp6v1f (ENSGMOG00000029852) #25	ENSGMOG00000033999	ENSGMOG00000033728	ENSGMOG00000026570	ENSGMOG00000031912	ENSGMOG00000030273	ENSGMOG00000020000	ENSGMOG00000008733	ENSGMOG00000001020
Protacanthopterygii	ANCESTRAL SPECIES	52	ENSGT00940000161814.g.b.f.a	ENSGT01100000263568.b.a.c.b.a.b.e.b	ENSGT00390000013347.a	ENSGT00940000154318.A.a	ENSGT00940000157502	ENSGT00940000159750	ENSGT00940000155415	ENSGT00940000159601	ENSGT00940000156003.l.b	ENSGT01010000222336.b.a.b.a.z	ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000163529	ENSGT00940000156375 #24	ENSGT00390000005529.b	ENSGT00940000153772.A #28	ENSGT00940000156878.i.b.b ##27	ENSGT00390000016053 #26	ENSGT00390000013208 #25	ENSGT00390000003224.B	ENSGT00940000160974.a	ENSGT00940000165748.a	ENSGT00940000159926 #30	ENSGT00530000063347.B #31	ENSGT01030000234549.a.a.a.a.b	ENSGT01010000222360.E.d
Salmoninae	ANCESTRAL SPECIES	682													ENSGT00390000009583.e	ENSGT00940000164581.A.a.b.c.a #20	ENSGT00530000063472.a.j.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.h #23	ENSGT00940000156375.i.a #24	ENSGT00940000155580.b.a.b.g #23	ENSGT00940000163529	ENSGT00940000156375.i.b #24	ENSGT00390000005529.b.c	ENSGT00940000153772.A.a #28	ENSGT00940000156878.i.b.b.b ##27	ENSGT00390000016053.a #26
Huchen	MODERN SPECIES	4867										srgap1b (ENSHHUG00000013585)	kics2 (ENSHHUG00000013693)	parp12b (ENSHHUG00000013700) #20	ENSHHUG00000013723	ENSHHUG00000013727 #21	ENSHHUG00000013736 #21	svopl (ENSHHUG00000013740) #22
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00940000157682.B.a.e	ENSGT00890000139436.B.g	ENSGT00390000005941.c.c.a	ENSGT01100000263568.b.a.c.b.a.b.e.b.a	ENSGT00390000013347.a.s	ENSGT00940000157502.q	ENSGT00940000159750.g	ENSGT00940000155415.nb	ENSGT00940000156003.l.b.i	ENSGT01010000222336.b.a.b.a.z	ENSGT01050000244882.a.a.a.a.b.d	ENSGT00950000182824.a.a.a.a.b.f	ENSGT00390000009583.e	ENSGT00940000164581.A.a.b.c.a #20	ENSGT00530000063472.a.i.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.h #23	ENSGT00940000156375.i.b #24	ENSGT00390000005529.b.c	ENSGT00940000153772.A.a #28	ENSGT00940000156878.i.b.b.b ##27	ENSGT00390000016053.a #26	ENSGT00390000013208.h #25	ENSGT00990000208688	ENSGT00390000003224.B	ENSGT00940000160974.a.c	ENSGT00940000165748.a.c	ENSGT00940000156024.i.a	ENSGT00940000159926.h #30	ENSGT00530000063347.B.p #31	ENSGT01030000234549.a.a.a.a.b.n
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	22	ENSGT00390000005941.c.c.a	ENSGT01100000263568.b.a.c.b.a.b.e.b.a	ENSGT00390000013347.a.s	ENSGT00940000157502.q	ENSGT00940000159750.g	ENSGT00940000159601.s.a	ENSGT00940000155415.nb	ENSGT00940000156003.l.b.i	ENSGT01010000222336.b.a.b.a.z.c	ENSGT01010000222336.b.a.b.a.z.d	ENSGT01050000244882.a.a.a.a.b.d	ENSGT00950000182824.a.a.a.a.b.f	ENSGT00390000009583.e	ENSGT00940000164581.A.a.b.c.a #20	ENSGT00530000063472.a.i.a #21	ENSGT00940000158632.i #22	ENSGT00940000155580.b.a.b.h #23	ENSGT00940000156375.i.b #24	ENSGT00390000005529.b.c	ENSGT00940000153772.A.a #28	ENSGT00940000156878.i.b.b.b ##27	ENSGT00390000016053.a #26	ENSGT00390000013208.h #25	ENSGT00990000208688	ENSGT00390000003224.B	ENSGT00940000160974.a.c	ENSGT00940000165748.a.c	ENSGT00940000156024.i.a	ENSGT00940000159926.h #30	ENSGT00530000063347.B.p #31	ENSGT01030000234549.a.a.a.a.b.n
Rainbow trout	MODERN SPECIES	6	ENSOMYG00000028366	ENSOMYG00000028282	ENSOMYG00000063266	ENSOMYG00000011029	ENSOMYG00000027412	ENSOMYG00000025042	ENSOMYG00000059223	ENSOMYG00000055268	ENSOMYG00000058294	ENSOMYG00000024159	ENSOMYG00000024125	ENSOMYG00000023767	ENSOMYG00000023500	parp12b (ENSOMYG00000023475) #20	ENSOMYG00000060071 #21	svopl (ENSOMYG00000023403) #22	mical3b (ENSOMYG00000023323) #23	ENSOMYG00000022876 #24	dennd6b (ENSOMYG00000022236)	ENSOMYG00000022142 #28	ENSOMYG00000022120 ##27	lamtor4 (ENSOMYG00000022092) #26	ATP6V1FNB (ENSOMYG00000022076)	ENSOMYG00000022065	ENSOMYG00000022049	ENSOMYG00000021554	irf5 (ENSOMYG00000022034) #30	tnpo3 (ENSOMYG00000021841) #31	opn1sw1 (ENSOMYG00000021760)	calua (ENSOMYG00000021744)	ENSOMYG00000021683
Oncorhynchus_a	ANCESTRAL SPECIES	31	ENSGT00940000157682.B.a.e	ENSGT00890000139436.B.g	ENSGT00390000005941.c.c.a	ENSGT00390000013347.a.s	ENSGT00940000157502.q	ENSGT00940000159750.g	ENSGT00940000159601.s.a	ENSGT00940000155415.nb	ENSGT00940000156003.l.b.i	ENSGT01010000222336.b.a.b.a.z.c	ENSGT01010000222336.b.a.b.a.z.d	ENSGT01050000244882.a.a.a.a.b.d	ENSGT00950000182824.a.a.a.a.b.f	ENSGT00390000009583.e	ENSGT00940000164581.A.a.b.c.a #20	ENSGT00940000158632.i #22	ENSGT00940000156375.i.b #24	ENSGT00390000005529.b.c	ENSGT00940000153772.A.a #28	ENSGT00940000156878.i.b.b.b ##27	ENSGT00390000016053.a #26	ENSGT00390000013208.h #25	ENSGT00990000208688	ENSGT00390000003224.B	ENSGT00940000160974.a.c	ENSGT00940000165748.a.c	ENSGT00940000156024.i.a	ENSGT00940000159926.h #30	ENSGT00530000063347.B.p #31	ENSGT01030000234549.a.a.a.a.b.n	ENSGT01010000222360.E.d.g
Coho salmon	MODERN SPECIES	10	tmem168a (ENSOKIG00005006485)	ENSOKIG00005006500	ENSOKIG00005006541	ifrd1 (ENSOKIG00005006584)	ENSOKIG00005006817	si:cabz01085950.1 (ENSOKIG00005006842)	ENSOKIG00005006873	TIMP3 (ENSOKIG00005007017)	LAMB1 (ENSOKIG00005007265)	ENSOKIG00005010696	ENSOKIG00005010734	AVPR1A (ENSOKIG00005010783)	ENSOKIG00005010814	KICS2 (ENSOKIG00005011153)	parp12b (ENSOKIG00005011163) #20	svopl (ENSOKIG00005011222) #22	lta4h (ENSOKIG00005011319) #24	dennd6b (ENSOKIG00005011532)	gcc1 (ENSOKIG00005011720) #28	ARF5 (ENSOKIG00005011734) ##27	ENSOKIG00005011855	ENSOKIG00005011903	ENSOKIG00005011940	ATP6V1FNB (ENSOKIG00005011957)	ENSOKIG00005011962	ENSOKIG00005011970	ENSOKIG00005011990	irf5 (ENSOKIG00005012073) #30	tnpo3 (ENSOKIG00005012107) #31	calua (ENSOKIG00005012337)	opn1sw1 (ENSOKIG00005012362)
Chinook salmon	MODERN SPECIES	8	ENSOTSG00005005920	tmem168a (ENSOTSG00005005919)	ENSOTSG00005005918	ENSOTSG00005005915	ifrd1 (ENSOTSG00005005855)	RASSF3 (ENSOTSG00005005852)	si:cabz01085950.1 (ENSOTSG00005005851)	TIMP3 (ENSOTSG00005005850)	ENSOTSG00005005783	ENSOTSG00005004601	acot15 (ENSOTSG00005004594)	AVPR1A (ENSOTSG00005004593)	srgap1b (ENSOTSG00005002286)	kics2 (ENSOTSG00005002251)	parp12b (ENSOTSG00005002248) #20	svopl (ENSOTSG00005002235) #22	lta4h (ENSOTSG00005044207) #24	dennd6b (ENSOTSG00005043794)	gcc1 (ENSOTSG00005043785) #28	ARF5 (ENSOTSG00005043784) ##27	lamtor4 (ENSOTSG00005043783) #26	atp6v1f (ENSOTSG00005043782) #25	ENSOTSG00005043781	ATP6V1FNB (ENSOTSG00005043780)	ENSOTSG00005043779	ENSOTSG00005043778	ENSOTSG00005043776	irf5 (ENSOTSG00005043775) #30	tnpo3 (ENSOTSG00005043771) #31	opn1sw1 (ENSOTSG00005043769)	calua (ENSOTSG00005043768)
Oncorhynchus	ANCESTRAL SPECIES	9	ENSGT00990000209739	ENSGT00890000139436.B.h	ENSGT00390000005941.c.d	ENSGT00390000013347.a.t	ENSGT00910000145367	ENSGT00940000157502.r	ENSGT00940000159750.h	ENSGT00940000155415.mb	ENSGT00940000159601.s.b	ENSGT00940000156003.l.b.j	ENSGT01050000244882.a.a.a.a.b.c	ENSGT00950000182824.a.a.a.a.b.e	ENSGT00390000009583.f	ENSGT00940000164581.A.a.b.c.b #20	ENSGT00530000063472.a.j.b #21	ENSGT00940000158632.j #22	ENSGT00940000155580.b.a.b.g #23	ENSGT00940000156375.i.a #24	ENSGT00390000005529.b.d	ENSGT00940000153772.A.b #28	ENSGT00940000156878.i.b.b.a ##27	ENSGT00390000016053.b #26	ENSGT00390000013208.g #25	ENSGT00940000160974.a.d	ENSGT00940000159926.g #30	ENSGT00530000063347.B.o #31	ENSGT01030000234549.a.a.a.a.b.m	ENSGT01010000222360.E.d.h	ENSGT00530000064318.j.b	ENSGT01030000235060.e.b	ENSGT00940000155197.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	16	ENSGT00990000209739	ENSGT00890000139436.B.h	ENSGT00390000005941.c.d	ENSGT00390000013347.a.t	ENSGT00910000145367	ENSGT00940000157502.r	ENSGT00940000159750.h	ENSGT00940000155415.mb	ENSGT00940000159601.s.b	ENSGT00940000156003.l.b.j	ENSGT01050000244882.a.a.a.a.b.c	ENSGT00950000182824.a.a.a.a.b.e	ENSGT00390000009583.f	ENSGT00940000164581.A.a.b.c.b #20	ENSGT00530000063472.a.j.b #21	ENSGT00940000158632.j #22	ENSGT00940000155580.b.a.b.g #23	ENSGT00940000156375.i.a #24	ENSGT00390000005529.b.d	ENSGT00940000153772.A.b #28	ENSGT00940000156878.i.b.b.a ##27	ENSGT00390000016053.b #26	ENSGT00940000165748.a.d	ENSGT00940000160974.a.d	ENSGT00940000159926.g #30	ENSGT00530000063347.B.o #31	ENSGT01030000234549.a.a.a.a.b.m	ENSGT01010000222360.E.d.h	ENSGT00530000064318.j.b	ENSGT01030000235060.e.b	ENSGT00940000155197.a.a
Coho salmon	MODERN SPECIES	29	ENSOKIG00005010848	gpr85 (ENSOKIG00005010856)	tmem168a (ENSOKIG00005010861)	ifrd1 (ENSOKIG00005010881)	ENSOKIG00005011129	ENSOKIG00005011140	RERG (ENSOKIG00005011155)	ENSOKIG00005011171	ENSOKIG00005011204	TIMP3 (ENSOKIG00005012120)	LAMB1 (ENSOKIG00005012258)	AVPR1A (ENSOKIG00005014948)	srgap1b (ENSOKIG00005014977)	kics2 (ENSOKIG00005015175)	parp12b (ENSOKIG00005015187) #20	ENSOKIG00005015204 #22	mical3b (ENSOKIG00005015238) #23	LTA4H (ENSOKIG00005015332) #24	dennd6b (ENSOKIG00005016131)	gcc1 (ENSOKIG00005016254) #28	ENSOKIG00005016261	ARF5 (ENSOKIG00005016268) ##27	lamtor4 (ENSOKIG00005016304) #26	ENSOKIG00005016332	ENSOKIG00005016354	irf5 (ENSOKIG00005016371) #30	tnpo3 (ENSOKIG00005016417) #31	opn1sw1 (ENSOKIG00005016572)	calua (ENSOKIG00005016587)	UPF2 (ENSOKIG00005016613)	ENSOKIG00005016681
Salmo	ANCESTRAL SPECIES	46	ENSGT00890000139436.B.g	ENSGT00390000005941.c.c.a	ENSGT00940000161814.g.b.f.a.b	ENSGT01100000263568.b.a.c.b.a.b.e.b.a	ENSGT00390000013347.a.s	ENSGT00940000157502.q	ENSGT00940000159750.g	ENSGT00940000155415.nb	ENSGT00940000156003.l.b.i	ENSGT01010000222336.b.a.b.a.z	ENSGT01050000244882.a.a.a.a.b.d	ENSGT00950000182824.a.a.a.a.b.f	ENSGT00390000009583.e	ENSGT00940000164581.A.a.b.c.a #20	ENSGT00530000063472.a.j.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b.h #23	ENSGT00940000156375.i.a #24	ENSGT00390000005529.b.c	ENSGT00940000153772.A.a #28	ENSGT00940000156878.i.b.b.b ##27	ENSGT00390000016053.a #26	ENSGT00390000013208.h #25	ENSGT00990000208688	ENSGT00390000003224.B	ENSGT00940000160974.a.c	ENSGT00940000156024.i.a	ENSGT00940000159926.h #30	ENSGT00530000063347.B.p #31	ENSGT01030000234549.a.a.a.a.b.n	ENSGT01010000222360.E.d.g
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000098128	timp3 (ENSSSAG00000118402)	ENSSSAG00000049648	ENSSSAG00000046709	ENSSSAG00000105274	ENSSSAG00000117198	ENSSSAG00000046412	ENSSSAG00000114160	ENSSSAG00000107627	ENSSSAG00000064208	ENSSSAG00000112048	ENSSSAG00000057165	ENSSSAG00000039819	parp12b (ENSSSAG00000088531) #20	ENSSSAG00000114211 #21	svopl (ENSSSAG00000070719) #22	mical3b (ENSSSAG00000070662) #23	ENSSSAG00000070633 #24	dennd6b (ENSSSAG00000070597)	ENSSSAG00000088615 ##27	ENSSSAG00000070562	gcc1 (ENSSSAG00000070590) #28	ATP6V1FNB (ENSSSAG00000109324)	ENSSSAG00000070552	ENSSSAG00000086006	ENSSSAG00000070425	irf5 (ENSSSAG00000070386) #30	tnpo3 (ENSSSAG00000070281) #31	opn1sw1 (ENSSSAG00000070270)	calu (ENSSSAG00000070260)	ENSSSAG00000118784
River trout	MODERN SPECIES	34	ENSSTUG00000049334	ifrd1 (ENSSTUG00000049368)	ENSSTUG00000049446	si:cabz01085950.1 (ENSSTUG00000049448)	ENSSTUG00000049452	TIMP3 (ENSSTUG00000049454)	ENSSTUG00000049516	ENSSTUG00000049703	ENSSTUG00000049709	ENSSTUG00000049717	ENSSTUG00000049722	srgap1b (ENSSTUG00000049732)	kics2 (ENSSTUG00000049743)	parp12b (ENSSTUG00000049745) #20	ENSSTUG00000049752 #21	svopl (ENSSTUG00000049756) #22	mical3b (ENSSTUG00000049764) #23	lta4h (ENSSTUG00000049777) #24	dennd6b (ENSSTUG00000049811)	gcc1 (ENSSTUG00000049878) #28	ARF5 (ENSSTUG00000049881) ##27	lamtor4 (ENSSTUG00000049884) #26	atp6v1f (ENSSTUG00000049886) #25	ENSSTUG00000049888	ENSSTUG00000049889	cenpo (ENSSTUG00000049891)	ENSSTUG00000049894	ENSSTUG00000049903	irf5 (ENSSTUG00000049928) #30	tnpo3 (ENSSTUG00000049936) #31	opn1sw1 (ENSSTUG00000050013)
Northern pike	MODERN SPECIES	22	ifrd1 (ENSELUG00000013860)	ENSELUG00000013773	ENSELUG00000013738	si:cabz01085950.1 (ENSELUG00000013666)	TIMP3 (ENSELUG00000013569)	SYN3 (ENSELUG00000013636)	ENSELUG00000013523	ENSELUG00000026677	ENSELUG00000013257	ENSELUG00000012998	AVPR1A (ENSELUG00000000471)	srgap1b (ENSELUG00000012951)	kics2 (ENSELUG00000012824)	parp12b (ENSELUG00000012799) #20	ENSELUG00000012722 #21	svopl (ENSELUG00000030832) #22	mical3b (ENSELUG00000012589) #23	lta4h (ENSELUG00000012567) #24	dennd6b (ENSELUG00000012489)	gcc1 (ENSELUG00000012435) #28	ARF5 (ENSELUG00000012409) ##27	lamtor4 (ENSELUG00000012339) #26	atp6v1f (ENSELUG00000029099) #25	ENSELUG00000012199	ENSELUG00000012189	ENSELUG00000012298	irf5 (ENSELUG00000000444) #30	tnpo3 (ENSELUG00000012153) #31	opn1sw1 (ENSELUG00000012075)	calua (ENSELUG00000012047)	UPF2 (ENSELUG00000012014)
Otomorpha	ANCESTRAL SPECIES	537											ENSGT01050000244882.a.a.a.a.b	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23
Otophysi	ANCESTRAL SPECIES	59	ENSGT00530000063554.b	ENSGT00940000156680.b	ENSGT00990000203615.a.a.b	ENSGT00390000004237.i	ENSGT00940000156566 #18	ENSGT00940000157480 #16	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT00940000153588.a.a.a #12	ENSGT00940000159122.h	ENSGT00390000004697	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000158225.i.a	ENSGT00940000154983.c.b	ENSGT00940000156016	ENSGT00390000010221.y	ENSGT00390000013550	ENSGT00940000157779	ENSGT00940000156380	ENSGT00390000007160.a.b	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212	ENSGT00940000167105	ENSGT00390000018272.j	ENSGT00530000063702.a.b
Characiphysae	ANCESTRAL SPECIES	15	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT00940000153588.a.a.a #12	ENSGT00940000159122.h	ENSGT00390000004697	ENSGT00530000064216	ENSGT01020000230401.b.a.b.b	ENSGT00940000158078	ENSGT00390000011669	ENSGT00940000154380.a.a.b	ENSGT00940000155263	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000158225.i.a	ENSGT00940000154983.c.b	ENSGT00940000156016	ENSGT00390000010221.y	ENSGT00390000013550	ENSGT00940000157779	ENSGT00940000156380	ENSGT00390000007160.a.b	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212	ENSGT00940000167105	ENSGT00390000018272.j	ENSGT00530000063702.a.b
Characiphysae_b	ANCESTRAL SPECIES	47	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.a.a #13	ENSGT00940000153588.a.a.a #12	ENSGT00940000159122.h	ENSGT00390000004697	ENSGT00530000064216	ENSGT01020000230401.b.a.b.b	ENSGT00940000158078	ENSGT00390000011669	ENSGT00940000154380.a.a.b	ENSGT00940000155263	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000158225.i.a	ENSGT00940000154983.c.b	ENSGT00940000156016	ENSGT00390000010221.y	ENSGT00390000013550	ENSGT00940000157779	ENSGT00940000156380	ENSGT00390000007160.a.b	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212	ENSGT00940000167105	ENSGT00390000018272.j	ENSGT00530000063702.a.b
Characoidei	ANCESTRAL SPECIES	37	ENSGT00390000015216	ENSGT00940000156619 #15	ENSGT00510000047764 #14	ENSGT00940000155472.a.b.b ##13	ENSGT00940000153588.a.a.a #12	ENSGT00940000159122.h	ENSGT00390000004697	ENSGT00530000064216	ENSGT01020000230401.b.a.b.b	ENSGT00940000158078	ENSGT00390000011669	ENSGT00940000154380.a.a.b	ENSGT00940000155263	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000158225.i.a	ENSGT00940000154983.c.b	ENSGT00940000156016	ENSGT00390000010221.y	ENSGT00390000013550	ENSGT00940000157779	ENSGT00940000156380	ENSGT00390000007160.a.b	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212	ENSGT00940000167105	ENSGT00390000018272.j	ENSGT00530000063702.a.b
Red-bellied piranha	MODERN SPECIES	58					FLNC (ENSPNAG00000008787) #12	ENSPNAG00000008840	ENSPNAG00000001219	ENSPNAG00000008882	hsp90b1 (ENSPNAG00000001253)	glt8d2 (ENSPNAG00000001265)	fbxo18 (ENSPNAG00000008968)	adm2a (ENSPNAG00000008980)	sbf1 (ENSPNAG00000009463)	parp12b (ENSPNAG00000009583) #20	ENSPNAG00000009636 #21	svopl (ENSPNAG00000009686) #22	mical3b (ENSPNAG00000001338) #23	tspan9b (ENSPNAG00000006806)	elapor2b (ENSPNAG00000009916)	dmtf1 (ENSPNAG00000009954)	tmem243b (ENSPNAG00000005357)	meig1 (ENSPNAG00000009997)	dclre1c (ENSPNAG00000010018)	hspa14 (ENSPNAG00000010084)	cdnf (ENSPNAG00000010114)	SHANK3 (ENSPNAG00000010220)	TYMP (ENSPNAG00000010241)	lsm8 (ENSPNAG00000010252)	ENSPNAG00000010286	kitlgb (ENSPNAG00000010308)	lmf2b (ENSPNAG00000010370)
Cyprinoidei	ANCESTRAL SPECIES	50								ENSGT00940000155263	ENSGT00940000154380.a.a.b	ENSGT00390000011669	ENSGT00940000158078	ENSGT01020000230401.b.a.b.b	ENSGT00530000064216	ENSGT00940000164581.A.a.b #20	ENSGT00530000063472.a #21	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000158225.i.a	ENSGT00940000154983.c.b.s	ENSGT00940000156016	ENSGT00390000010221.y	ENSGT00390000013550	ENSGT00940000157779	ENSGT00940000156380	ENSGT00390000007160.a.b	ENSGT00940000153561.b.b.g.b	ENSGT00390000009250	ENSGT00730000111212	ENSGT00940000167105	ENSGT00390000018272.j	ENSGT00530000063702.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	193	ENSGT00390000015216.z	ENSGT00940000156619.b #15	ENSGT00510000047764.b #14	ENSGT00940000155472.a.b.a.a.f #13	ENSGT00940000153588.a.a.a.b #12	ENSGT00940000159122.h.b	ENSGT00390000004697.b	ENSGT00940000155263.f	ENSGT00940000154380.a.a.b.e	ENSGT00390000011669.e	ENSGT00940000158078.c	ENSGT01020000230401.b.a.b.b	ENSGT00530000064216	ENSGT00940000164581.A.a.b.b #20	ENSGT00530000063472.a.a #21	ENSGT00940000158632.e #22	ENSGT00940000155580.b.a.b.j #23	ENSGT00940000158225.i.a.m	ENSGT00940000154983.c.b.s.a	ENSGT00940000156016.g	ENSGT00390000010221.y.a	ENSGT00390000013550.q	ENSGT00940000157779.c	ENSGT00940000156380.r	ENSGT00390000007160.a.b.b	ENSGT00940000153561.b.b.g.b.b	ENSGT00390000009250.d	ENSGT00730000111212	ENSGT00940000167105	ENSGT00390000018272.j.c	ENSGT00530000063702.a.b.c
Cyprininae_a	ANCESTRAL SPECIES	155						ENSGT00940000153588.a.a.a.b #12	ENSGT00940000159122.h.b	ENSGT00940000155263.f	ENSGT00940000154380.a.a.b.e	ENSGT00390000011669.e	ENSGT00940000158078.c	ENSGT01020000230401.b.a.b.b	ENSGT00530000064216	ENSGT00940000164581.A.a.b.b #20	ENSGT00530000063472.a.a #21	ENSGT00940000158632.e #22	ENSGT00940000155580.b.a.b.j #23	ENSGT00940000158225.i.a.m	ENSGT00940000154983.c.b.s.a	ENSGT00940000156016.g	ENSGT00390000010221.y.a	ENSGT00390000013550.q	ENSGT00940000157779.c	ENSGT00940000156380.r	ENSGT00390000007160.a.b.b	ENSGT00940000153561.b.b.g.b.b	ENSGT00390000009250.d	ENSGT00730000111212	ENSGT00940000167105.b	ENSGT00390000018272.j.c	ENSGT00530000063702.a.b.c
Common carp reference	MODERN SPECIES	36	ENSCCRG00000000777	stab2 (ENSCCRG00000073568) #18	wnt16 (ENSCCRG00000006386) #16	ing3 (ENSCCRG00000017591) #15	tspan12 (ENSCCRG00000017574) #14	kcnd2 (ENSCCRG00000064443) #13	ENSCCRG00000017050 #12	ENSCCRG00000075891	sbf1 (ENSCCRG00000013147)	adm2a (ENSCCRG00000068459)	fbxo18 (ENSCCRG00000016980)	glt8d2 (ENSCCRG00000016999)	ENSCCRG00000080790	ENSCCRG00000062217	ENSCCRG00000007807 #21	svopl (ENSCCRG00000027884) #22	mical3b (ENSCCRG00000050452) #23	tspan9b (ENSCCRG00000069667)	elapor2b (ENSCCRG00000050532)	dmtf1 (ENSCCRG00000024159)	dclre1c (ENSCCRG00000063013)	hspa14 (ENSCCRG00000057305)	cdnf (ENSCCRG00000046200)	ENSCCRG00000035313	ENSCCRG00000080223	kitlgb (ENSCCRG00000046244)	ENSCCRG00000046236	lmf2b (ENSCCRG00000046256)	ovch1 (ENSCCRG00000046264) #19	ENSCCRG00000017558	ipo8 (ENSCCRG00000017605)
Golden-line barbel	MODERN SPECIES	32						FLNC (ENSSGRG00000047112) #12	ENSSGRG00000047097	ENSSGRG00000047096	sbf1 (ENSSGRG00000046374)	adm2a (ENSSGRG00000046346)	fbxo18 (ENSSGRG00000046345)	glt8d2 (ENSSGRG00000046344)	hsp90b1 (ENSSGRG00000045145)	parp12b (ENSSGRG00000045118) #20	ENSSGRG00000045116 #21	svopl (ENSSGRG00000045103) #22	mical3b (ENSSGRG00000045092) #23	tspan9b (ENSSGRG00000045091)	elapor2b (ENSSGRG00000045090)	dmtf1 (ENSSGRG00000045089)	tmem243b (ENSSGRG00000045088)	tmem243b (ENSSGRG00000045086)	meig1 (ENSSGRG00000045085)	dclre1c (ENSSGRG00000045084)	hspa14 (ENSSGRG00000044769)	SHANK3 (ENSSGRG00000044719)	TYMP (ENSSGRG00000044688)	lsm8 (ENSSGRG00000044691)	ENSSGRG00000044687	kitlgb (ENSSGRG00000044686)	lmf2b (ENSSGRG00000044684)
Goldfish	MODERN SPECIES	21	ENSCARG00000021639	cct2 (ENSCARG00000021363)	ENSCARG00000021360	ENSCARG00000021349	ENSCARG00000021344	FLNC (ENSCARG00000016576) #12	ENSCARG00000016350	ENSCARG00000016338	adm2a (ENSCARG00000014677)	fbxo18 (ENSCARG00000014629)	ENSCARG00000014615	ENSCARG00000014353	ENSCARG00000014328	ENSCARG00000014324	ENSCARG00000014310 #21	svopl (ENSCARG00000014286) #22	tspan9b (ENSCARG00000014107)	elapor2b (ENSCARG00000012999)	dmtf1 (ENSCARG00000012927)	tmem243b (ENSCARG00000012917)	meig1 (ENSCARG00000012913)	cdnf (ENSCARG00000012895)	hspa14 (ENSCARG00000012816)	SHANK3 (ENSCARG00000012375)	lsm8 (ENSCARG00000012330)	ENSCARG00000012317	kitlgb (ENSCARG00000012298)	lmf2b (ENSCARG00000012279)	ENSCARG00000012265	TMTC1 (ENSCARG00000012159)	ipo8 (ENSCARG00000010553)
Cyprininae	ANCESTRAL SPECIES	2	ENSGT00940000157480.i #16	ENSGT00390000015216.y	ENSGT00940000156619.a #15	ENSGT00510000047764.a #14	ENSGT00940000155472.a.b.a.a.e #13	ENSGT00940000153588.a.a.a.a #12	ENSGT00940000159122.h.a	ENSGT00390000004697.a	ENSGT00940000155263.e	ENSGT00940000154380.a.a.b.f	ENSGT00390000011669.f	ENSGT00940000158078.d	ENSGT01020000230401.b.a.b.a	ENSGT00940000164581.A.a.b.a #20	ENSGT00530000063472.a.b #21	ENSGT00940000158632.f #22	ENSGT00940000155580.b.a.b.i #23	ENSGT00940000158225.i.a.n	ENSGT00940000154983.c.b.s.b	ENSGT00940000156016.h	ENSGT00390000010221.y.b	ENSGT00390000013550.r	ENSGT00940000157779.d	ENSGT00940000156380.q	ENSGT00390000007160.a.b.a	ENSGT00940000153561.b.b.g.b.a	ENSGT00390000009250.c	ENSGT00390000018272.j.d	ENSGT00530000063702.a.b.d	ENSGT00940000158027.k	ENSGT00940000158848.a
Goldfish	MODERN SPECIES	33	csrp2 (ENSCARG00000050767)	e2f7 (ENSCARG00000050734)	ENSCARG00000050728	gpr22a (ENSCARG00000050713)	ENSCARG00000050692	dus4l (ENSCARG00000050607)	bcap29 (ENSCARG00000050589)	slco1c1 (ENSCARG00000050572)	PDE3A (ENSCARG00000050489)	aebp2 (ENSCARG00000050458)	plekha5 (ENSCARG00000049888)	ENSCARG00000049824	ENSCARG00000049818	ENSCARG00000049802	ENSCARG00000049718 #21	svopl (ENSCARG00000049425) #22	mical3b (ENSCARG00000048671) #23	tspan9b (ENSCARG00000035989)	elapor2b (ENSCARG00000033260)	dmtf1 (ENSCARG00000033050)	tmem243b (ENSCARG00000033028)	meig1 (ENSCARG00000033015)	dclre1c (ENSCARG00000032234)	hspa14 (ENSCARG00000031605)	cdnf (ENSCARG00000031566)	SHANK3 (ENSCARG00000031315)	TYMP (ENSCARG00000031202)	lsm8 (ENSCARG00000031180)	ENSCARG00000031164	kitlgb (ENSCARG00000031137)	lmf2b (ENSCARG00000030955)
Goldfish	MODERN SPECIES	33	atp6v1e1b (ENSCARG00000054594)	ADA2 (ENSCARG00000054676)	GALNT8 (ENSCARG00000054699)	rad51ap1 (ENSCARG00000054714)	fgf23 (ENSCARG00000054736)	fgf6b (ENSCARG00000054772)	tigarb (ENSCARG00000054788)	ccnd2b (ENSCARG00000054808)	tmem209 (ENSCARG00000054835)	ENSCARG00000055152	fbxo18 (ENSCARG00000055227)	glt8d2 (ENSCARG00000055453)	hsp90b1 (ENSCARG00000055651)	parp12b (ENSCARG00000055746) #20	ENSCARG00000055762 #21	svopl (ENSCARG00000055836) #22	tspan9b (ENSCARG00000056278)	FAXC (ENSCARG00000056318)	ccnc (ENSCARG00000056349)	ngs (ENSCARG00000056434)	pgm3 (ENSCARG00000056520)	ENSCARG00000056662	foxm1 (ENSCARG00000056708)	rhno1 (ENSCARG00000056728)	pex26 (ENSCARG00000056742)	ENSCARG00000056759	ENSCARG00000056857	ARL1 (ENSCARG00000057305)	tnnt2e (ENSCARG00000057414)	ENSCARG00000057430	tnni4a (ENSCARG00000057495)
Cyprininae_a	ANCESTRAL SPECIES	136	ENSGT00940000157480.i #16	ENSGT00390000015216.y	ENSGT00940000156619.a #15	ENSGT00510000047764.a #14	ENSGT00940000155472.a.b.a.a.e #13	ENSGT00940000153588.a.a.a.a #12	ENSGT00940000159122.h.a	ENSGT00390000004697.a	ENSGT00940000155263.e	ENSGT00940000154380.a.a.b.f	ENSGT00390000011669.f	ENSGT00940000158078.d	ENSGT01020000230401.b.a.b.a	ENSGT00940000164581.A.a.b.a #20	ENSGT00530000063472.a.b #21	ENSGT00940000158632.f #22	ENSGT00940000155580.b.a.b.i #23	ENSGT00940000158225.i.a.n	ENSGT00940000154983.c.b.s.b	ENSGT00940000156016.h	ENSGT00390000010221.y.b	ENSGT00390000013550.r	ENSGT00940000157779.d	ENSGT00940000156380.q	ENSGT00390000007160.a.b.a	ENSGT00940000153561.b.b.g.b.a	ENSGT00390000009250.c	ENSGT00940000167105.a	ENSGT00530000063702.a.b.d	ENSGT00940000163017.m #19	ENSGT00940000158027.k
Common carp reference	MODERN SPECIES	8	wnt16 (ENSCCRG00000000738) #16	CPED1 (ENSCCRG00000006390)	ing3 (ENSCCRG00000063084) #15	tspan12 (ENSCCRG00000051650) #14	kcnd2 (ENSCCRG00000059136) #13	ENSCCRG00000012887 #12	ENSCCRG00000071096	ENSCCRG00000003580	sbf1 (ENSCCRG00000002431)	adm2a (ENSCCRG00000057839)	fbxo18 (ENSCCRG00000005470)	hsp90b1 (ENSCCRG00000060067)	glt8d2 (ENSCCRG00000005500)	parp12b (ENSCCRG00000005507) #20	ENSCCRG00000005513 #21	svopl (ENSCCRG00000043226) #22	mical3b (ENSCCRG00000028038) #23	tspan9b (ENSCCRG00000028226)	elapor2b (ENSCCRG00000028254)	dmtf1 (ENSCCRG00000033735)	ENSCCRG00000033764	tmem243b (ENSCCRG00000068411)	meig1 (ENSCCRG00000057414)	hspa14 (ENSCCRG00000046169)	cdnf (ENSCCRG00000033779)	ENSCCRG00000011011	ENSCCRG00000062907	ENSCCRG00000035311	ENSCCRG00000035306	lmf2b (ENSCCRG00000035292)	ovch1 (ENSCCRG00000066925) #19
Golden-line barbel	MODERN SPECIES	150	ENSSGRG00000005832	stab2 (ENSSGRG00000006866) #18	wnt16 (ENSSGRG00000006989) #16	ENSSGRG00000006991	ing3 (ENSSGRG00000006992) #15	tspan12 (ENSSGRG00000007072) #14	kcnd2 (ENSSGRG00000007080) #13	FLNC (ENSSGRG00000007478) #12	ENSSGRG00000020939	sbf1 (ENSSGRG00000021010)	adm2a (ENSSGRG00000026569)	fbxo18 (ENSSGRG00000026570)	ENSSGRG00000026573	parp12b (ENSSGRG00000026658) #20	ENSSGRG00000026663 #21	svopl (ENSSGRG00000026665) #22	mical3b (ENSSGRG00000026682) #23	tspan9b (ENSSGRG00000027555)	elapor2b (ENSSGRG00000027576)	dmtf1 (ENSSGRG00000027828)	tmem243b (ENSSGRG00000027830)	meig1 (ENSSGRG00000027831)	dclre1c (ENSSGRG00000027883)	hspa14 (ENSSGRG00000027890)	cdnf (ENSSGRG00000028147)	SHANK3 (ENSSGRG00000028148)	ENSSGRG00000028155	lsm8 (ENSSGRG00000028158)	ENSSGRG00000028161	kitlgb (ENSSGRG00000028162)	lmf2b (ENSSGRG00000028163)
Zebrafish	MODERN SPECIES	19	ing3 (ENSDARG00000034326) #15	tspan12 (ENSDARG00000032389) #14	kcnd2 (ENSDARG00000032799) #13	FLNC (ENSDARG00000018820) #12	ENSDARG00000057921	ENSDARG00000057929	sbf1 (ENSDARG00000062968)	ENSDARG00000070126	adm2a (ENSDARG00000045708)	fbxo18 (ENSDARG00000062983)	glt8d2 (ENSDARG00000057942)	hsp90b1 (ENSDARG00000003570)	ENSDARG00000086650	parp12b (ENSDARG00000057974) #20	ENSDARG00000063008 #21	svopl (ENSDARG00000057983) #22	mical3b (ENSDARG00000094732) #23	tspan9b (ENSDARG00000045706)	ENSDARG00000114963	elapor2b (ENSDARG00000004386)	dmtf1 (ENSDARG00000025824)	tmem243b (ENSDARG00000033179)	meig1 (ENSDARG00000045705)	dclre1c (ENSDARG00000045704)	hspa14 (ENSDARG00000058030)	cdnf (ENSDARG00000075501)	SHANK3 (ENSDARG00000063054)	ENSDARG00000099821	lsm8 (ENSDARG00000091656)	ENSDARG00000088044	kitlgb (ENSDARG00000058042)
Clupeiformes	ANCESTRAL SPECIES	412										ENSGT00940000155878	ENSGT00940000158580	ENSGT01050000244882.a.a.a.a.a.e.a	ENSGT00950000182824.a.a.a.a.b	ENSGT00390000009583	ENSGT00940000164581.A.a.b #20	ENSGT00940000158632 #22	ENSGT00940000155580.b.a.b #23	ENSGT00940000156016	ENSGT00390000010221.y	ENSGT00390000013550