Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000158131 #22
Gnathostomata	ANCESTRAL SPECIES	227					ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28
Euteleostomi	ANCESTRAL SPECIES	109	ENSGT00940000155372	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00990000210463	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28
Sarcopterygii	ANCESTRAL SPECIES	2	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00990000210463	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000170545	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00940000160373	ENSGT00440000033329.a.a.b	ENSGT00390000010172	ENSGT00940000164461	ENSGT00390000003428	ENSGT00940000177822	ENSGT00940000178006	ENSGT00440000033811	ENSGT00940000161471	ENSGT00940000159453	ENSGT00940000158640	ENSGT00940000162193
Tetrapoda	ANCESTRAL SPECIES	3	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00990000210463	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789
Amniota	ANCESTRAL SPECIES	2	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Mammalia	ANCESTRAL SPECIES	1	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Theria	ANCESTRAL SPECIES	6	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Eutheria	ANCESTRAL SPECIES	2	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00640000091653	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00640000091653	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Primates	ANCESTRAL SPECIES	10	ENSGT00640000091653	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT00640000091653	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00640000091653	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.sb ##12	ENSGT00910000146657	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b	ENSGT00940000154589.b
Hominoidea	ANCESTRAL SPECIES	10	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00910000146657	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b	ENSGT00940000154589.b	ENSGT00390000002219
Hominidae	ANCESTRAL SPECIES	12	ENSGT00390000000537.f.b	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b	ENSGT00940000154589.b	ENSGT00390000002219
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00390000000537.f.b	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000154888.j	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b	ENSGT00940000154589.b
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000000537.f.b	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000154888.j	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b	ENSGT00940000154589.b
Pan	ANCESTRAL SPECIES	7	ENSGT00390000000537.f.b	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157200.e.b #23	ENSGT00940000160665 #24	ENSGT00390000012959.b.s.b #25	ENSGT00940000159343.b #26	ENSGT01040000241132 #27	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000155193.a.a.f.b.a.a #33	ENSGT00390000014818.i.a.a #34	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	17	QRFPR (ENSPTRG00000016406) #7	TNIP3 (ENSPTRG00000016405) #8	NDNF (ENSPTRG00000016404) #9	PRDM5 (ENSPTRG00000016403) #10	ENSPTRG00000049051 #11	MAD2L1 (ENSPTRG00000016401) #12	PDE5A (ENSPTRG00000016400) #13	ENSPTRG00000023546 #14	FABP2 (ENSPTRG00000016399) #15	C4H4orf3 (ENSPTRG00000016398) #16	USP53 (ENSPTRG00000016397) #17	MYOZ2 (ENSPTRG00000016395) #18	SYNPO2 (ENSPTRG00000016394) #19	SEC24D (ENSPTRG00000052560) #20	METTL14 (ENSPTRG00000016391) #21	PRSS12 (ENSPTRG00000016390) #22	ENSPTRG00000049703 #23	NDST3 (ENSPTRG00000016389) #24	ENSPTRG00000019067 #25	ENSPTRG00000042667 #26	ENSPTRG00000048658 #27	NDST4 (ENSPTRG00000016386) #28	UGT8 (ENSPTRG00000016385) #29	ARSJ (ENSPTRG00000016384) #30	CAMK2D (ENSPTRG00000016383) #31	ANK2 (ENSPTRG00000016382) #32	ENSPTRG00000051913 #33	ENSPTRG00000044802 #34	LARP7 (ENSPTRG00000016380) #35	ZGRF1 (ENSPTRG00000016379) #36	NEUROG2 (ENSPTRG00000047838) #37
Chimpanzee	MODERN SPECIES	535																ENSPTRG00000044055 ##22
Bonobo	MODERN SPECIES	17	QRFPR (ENSPPAG00000039892) #7	ENSPPAG00000014076 #8	NDNF (ENSPPAG00000019574) #9	PRDM5 (ENSPPAG00000043045) #10	ENSPPAG00000043124 #11	MAD2L1 (ENSPPAG00000028274) #12	ENSPPAG00000016397	PDE5A (ENSPPAG00000041127) #13	FABP2 (ENSPPAG00000016227) #15	ENSPPAG00000039685 #16	USP53 (ENSPPAG00000036629) #17	MYOZ2 (ENSPPAG00000036517) #18	SYNPO2 (ENSPPAG00000035039) #19	SEC24D (ENSPPAG00000028599) #20	METTL14 (ENSPPAG00000029930) #21	PRSS12 (ENSPPAG00000035391) #22	ENSPPAG00000031601 #23	NDST3 (ENSPPAG00000031007) #24	ENSPPAG00000032949 #25	ENSPPAG00000028200 #26	ENSPPAG00000019617 #27	NDST4 (ENSPPAG00000039280) #28	UGT8 (ENSPPAG00000009777) #29	ARSJ (ENSPPAG00000040500) #30	CAMK2D (ENSPPAG00000030941)	ANK2 (ENSPPAG00000037570) #32	ENSPPAG00000016126 #34	ENSPPAG00000037938 #33	LARP7 (ENSPPAG00000038420) #35	ZGRF1 (ENSPPAG00000002164) #36	ENSPPAG00000042238
Human	MODERN SPECIES	16	SMIM43 (ENSG00000164112)	ANXA5 (ENSG00000164111)	QRFPR (ENSG00000186867) #7	TNIP3 (ENSG00000050730) #8	NDNF (ENSG00000173376) #9	PRDM5 (ENSG00000138738) #10	MAD2L1 (ENSG00000164109) #12	PDE5A (ENSG00000138735) #13	FABP2 (ENSG00000145384) #15	C4orf3 (ENSG00000164096) #16	USP53 (ENSG00000145390) #17	MYOZ2 (ENSG00000172399) #18	SYNPO2 (ENSG00000172403) #19	SEC24D (ENSG00000150961) #20	METTL14 (ENSG00000145388) #21	PRSS12 (ENSG00000164099) #22	NDST3 (ENSG00000164100) #24	TRAM1L1 (ENSG00000174599)	NDST4 (ENSG00000138653) #28	UGT8 (ENSG00000174607) #29	ARSJ (ENSG00000180801) #30	CAMK2D (ENSG00000145349)	ANK2 (ENSG00000145362) #32	LARP7 (ENSG00000174720) #35	ZGRF1 (ENSG00000138658) #36	NEUROG2 (ENSG00000178403) #37	ALPK1 (ENSG00000073331)	TIFA (ENSG00000145365)	AP1AR (ENSG00000138660)	FAM241A (ENSG00000174749)	PITX2 (ENSG00000164093)
Gorilla	MODERN SPECIES	17	QRFPR (ENSGGOG00000008131) #7	ENSGGOG00000012377 #8	NDNF (ENSGGOG00000008613) #9	PRDM5 (ENSGGOG00000013562) #10	ENSGGOG00000016645 #11	MAD2L1 (ENSGGOG00000002516) #12	PDE5A (ENSGGOG00000013689) #13	FABP2 (ENSGGOG00000027841) #15	C4orf3 (ENSGGOG00000006489) #16	USP53 (ENSGGOG00000006480) #17	MYOZ2 (ENSGGOG00000010448) #18	SYNPO2 (ENSGGOG00000012942) #19	SEC24D (ENSGGOG00000002496) #20	METTL14 (ENSGGOG00000016449) #21	CEP170 (ENSGGOG00000016268)	PRSS12 (ENSGGOG00000002810) #22	NDST3 (ENSGGOG00000034831) #24	ENSGGOG00000008099 #25	TRAM1L1 (ENSGGOG00000000128)	NDST4 (ENSGGOG00000000466) #28	UGT8 (ENSGGOG00000026542) #29	ARSJ (ENSGGOG00000012700) #30	CAMK2D (ENSGGOG00000022729)	ANK2 (ENSGGOG00000028608) #32	ENSGGOG00000026585 #33	ENSGGOG00000022391	ENSGGOG00000006438 #35	ENSGGOG00000023567 #35	ZGRF1 (ENSGGOG00000022552) #36	NEUROG2 (ENSGGOG00000038276) #37	ENSGGOG00000025016
Orangutan	MODERN SPECIES	17	ANXA5 (ENSPPYG00000015035)	ENSPPYG00000040499	QRFPR (ENSPPYG00000015034) #7	ENSPPYG00000015033 #8	NDNF (ENSPPYG00000015032) #9	PRDM5 (ENSPPYG00000015031) #10	MAD2L1 (ENSPPYG00000015029) #12	PDE5A (ENSPPYG00000015028) #13	FABP2 (ENSPPYG00000015027) #15	C4H4orf3 (ENSPPYG00000034080) #16	USP53 (ENSPPYG00000015025) #17	MYOZ2 (ENSPPYG00000015023) #18	SYNPO2 (ENSPPYG00000015022) #19	SEC24D (ENSPPYG00000015021) #20	METTL14 (ENSPPYG00000015020) #21	PRSS12 (ENSPPYG00000015019) #22	NDST3 (ENSPPYG00000015018) #24	TRAM1L1 (ENSPPYG00000015017)	ENSPPYG00000034491 #27	NDST4 (ENSPPYG00000015016) #28	UGT8 (ENSPPYG00000015015) #29	ENSPPYG00000031959 #30	CAMK2D (ENSPPYG00000015013)	ANK2 (ENSPPYG00000015012) #32	ENSPPYG00000039052 ##34	ENSPPYG00000039420	ENSPPYG00000033011	LARP7 (ENSPPYG00000015010) #35	ZGRF1 (ENSPPYG00000015009) #36	NEUROG2 (ENSPPYG00000015008) #37	ALPK1 (ENSPPYG00000015007)
Gibbon	MODERN SPECIES	22	ENSNLEG00000031186	ENSNLEG00000009139 #8	NDNF (ENSNLEG00000029039) #9	PRDM5 (ENSNLEG00000009107) #10	ENSNLEG00000030321 #11	ENSNLEG00000034205	ENSNLEG00000009092 ##12	PDE5A (ENSNLEG00000009039) #13	FABP2 (ENSNLEG00000009034) #15	ENSNLEG00000028084 #16	USP53 (ENSNLEG00000009014) #17	MYOZ2 (ENSNLEG00000008993) #18	SYNPO2 (ENSNLEG00000008969) #19	SEC24D (ENSNLEG00000008903) #20	METTL14 (ENSNLEG00000008883) #21	PRSS12 (ENSNLEG00000008859) #22	NDST3 (ENSNLEG00000008847) #24	TRAM1L1 (ENSNLEG00000018250)	ENSNLEG00000031088 #26	ENSNLEG00000031898	ZNF131 (ENSNLEG00000010402)	ENSNLEG00000029926	NIM1K (ENSNLEG00000010407)	HMGCS1 (ENSNLEG00000028375)	CCL28 (ENSNLEG00000010425)	TMEM267 (ENSNLEG00000010427)	C5orf34 (ENSNLEG00000010432)	ENSNLEG00000032653	PAIP1 (ENSNLEG00000010443)	ENSNLEG00000034074	NNT (ENSNLEG00000010475)
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.sb ##12	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.c #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b	ENSGT00940000154589.b
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.sb ##12	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.c #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b	ENSGT00940000154589.b	ENSGT00390000002219
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000153395.a.sb ##12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.c #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000154550.a.f.i	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00910000148089	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b
Macaca	ANCESTRAL SPECIES	18	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.sb ##12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.c #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000154550.a.f.i	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00910000148089	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753	ENSGT00950000182970.A.b.d.b
Pig-tailed macaque	MODERN SPECIES	126	QRFPR (ENSMNEG00000041533) #7	TNIP3 (ENSMNEG00000045024) #8	NDNF (ENSMNEG00000043596) #9	PRDM5 (ENSMNEG00000019018) #10	ENSMNEG00000025951 #11	MAD2L1 (ENSMNEG00000040691) ##12	PDE5A (ENSMNEG00000016569) #13	FABP2 (ENSMNEG00000036803) #15	ENSMNEG00000030057 #16	USP53 (ENSMNEG00000035179) #17	MYOZ2 (ENSMNEG00000021579) #18	SYNPO2 (ENSMNEG00000030337) #19	SEC24D (ENSMNEG00000035401) #20	METTL14 (ENSMNEG00000032737) #21	ENSMNEG00000043767	PRSS12 (ENSMNEG00000043650) #22	NDST3 (ENSMNEG00000033435) #24	TRAM1L1 (ENSMNEG00000025342)	ENSMNEG00000033966	ENSMNEG00000042964	NDST4 (ENSMNEG00000035599) #28	UGT8 (ENSMNEG00000036824) #29	ENSMNEG00000022132	ARSJ (ENSMNEG00000032901) #30	CAMK2D (ENSMNEG00000045488)	ANK2 (ENSMNEG00000039312) #32	ENSMNEG00000032481	LARP7 (ENSMNEG00000034758) #35	ZGRF1 (ENSMNEG00000031300) #36	NEUROG2 (ENSMNEG00000006870) #37	ENSMNEG00000036856
Macaca_a	ANCESTRAL SPECIES	12	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.sb ##12	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT01100000263508.A.d.e.b.a.c.b.c.a.b.a.a.a.a	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Crab-eating macaque	MODERN SPECIES	15	QRFPR (ENSMFAG00000039454) #7	TNIP3 (ENSMFAG00000044869) #8	NDNF (ENSMFAG00000003473) #9	ENSMFAG00000065496	PRDM5 (ENSMFAG00000045845) #10	ENSMFAG00000040479 #11	ENSMFAG00000043866 ##12	PDE5A (ENSMFAG00000041058) #13	FABP2 (ENSMFAG00000038050) #15	USP53 (ENSMFAG00000045201) #17	ENSMFAG00000064334	MYOZ2 (ENSMFAG00000000291) #18	SYNPO2 (ENSMFAG00000037699) #19	SEC24D (ENSMFAG00000038796) #20	METTL14 (ENSMFAG00000045633) #21	PRSS12 (ENSMFAG00000031132) #22	NDST3 (ENSMFAG00000034323) #24	TRAM1L1 (ENSMFAG00000029724)	ENSMFAG00000029687	ENSMFAG00000063126	NDST4 (ENSMFAG00000002158) #28	UGT8 (ENSMFAG00000035714) #29	ARSJ (ENSMFAG00000020823) #30	ENSMFAG00000048060	ENSMFAG00000040802 #31	ANK2 (ENSMFAG00000032015) #32	ENSMFAG00000050842	ENSMFAG00000037960	LARP7 (ENSMFAG00000036506) #35	ZGRF1 (ENSMFAG00000038639) #36	NEUROG2 (ENSMFAG00000026432) #37
Rhesus	MODERN SPECIES	15	ANXA5 (ENSMMUG00000009194)	QRFPR (ENSMMUG00000050565) #7	TNIP3 (ENSMMUG00000004415) #8	NDNF (ENSMMUG00000013989) #9	PRDM5 (ENSMMUG00000003249) #10	ENSMMUG00000062519	MAD2L1 (ENSMMUG00000054168) #12	PDE5A (ENSMMUG00000007305) #13	FABP2 (ENSMMUG00000061216) #15	USP53 (ENSMMUG00000008705) #17	ENSMMUG00000054494	MYOZ2 (ENSMMUG00000008703) #18	SYNPO2 (ENSMMUG00000008702) #19	SEC24D (ENSMMUG00000007294) #20	METTL14 (ENSMMUG00000007292) #21	PRSS12 (ENSMMUG00000015260) #22	NDST3 (ENSMMUG00000015259) #24	TRAM1L1 (ENSMMUG00000011778)	ENSMMUG00000006015	NDST4 (ENSMMUG00000002883) #28	UGT8 (ENSMMUG00000014456) #29	ARSJ (ENSMMUG00000023597) #30	CAMK2D (ENSMMUG00000008587) #31	ENSMMUG00000062879	ANK2 (ENSMMUG00000008633) #32	LARP7 (ENSMMUG00000017911) #35	ZGRF1 (ENSMMUG00000023591) #36	NEUROG2 (ENSMMUG00000014078) #37	ALPK1 (ENSMMUG00000014073)	TIFA (ENSMMUG00000015589)	AP1AR (ENSMMUG00000065026)
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00940000153395.a.rb.b.a ##12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.c #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000154550.a.f.i	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00910000148089	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00390000001376.ab.a	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753
Olive baboon	MODERN SPECIES	13	PRDM5 (ENSPANG00000023612) #10	ENSPANG00000041603	ENSPANG00000049116	ENSPANG00000031623 #11	MAD2L1 (ENSPANG00000019721) #12	ENSPANG00000044973	ENSPANG00000037217	PDE5A (ENSPANG00000011908) #13	FABP2 (ENSPANG00000008053) #15	C4orf3 (ENSPANG00000045313) #16	USP53 (ENSPANG00000001095) #17	MYOZ2 (ENSPANG00000013128) #18	SYNPO2 (ENSPANG00000008113) #19	SEC24D (ENSPANG00000016989) #20	METTL14 (ENSPANG00000015932) #21	PRSS12 (ENSPANG00000018164) #22	NDST3 (ENSPANG00000008114) #24	TRAM1L1 (ENSPANG00000043446)	ENSPANG00000050684	ENSPANG00000047137	ENSPANG00000045334	NDST4 (ENSPANG00000008604) #28	UGT8 (ENSPANG00000017462) #29	ARSJ (ENSPANG00000009813) #30	ENSPANG00000038714	ENSPANG00000026399 #31	ENSPANG00000044582	ANK2 (ENSPANG00000007604) #32	ENSPANG00000031412	ENSPANG00000048023	ENSPANG00000008871
Cercopithecinae_d	ANCESTRAL SPECIES	62	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.sb ##12	ENSGT00940000153395.a.rb.b.a ##12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.c #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000154550.a.f.i	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00910000148089	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00390000001376.ab.a	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000154888.i.a.b	ENSGT00940000159753
Drill	MODERN SPECIES	667						ENSMLEG00000038605 #11	ENSMLEG00000036707 ##12	PDE5A (ENSMLEG00000032995) #13	FABP2 (ENSMLEG00000029506) #15	ENSMLEG00000033024 #16	USP53 (ENSMLEG00000035788) #17	MYOZ2 (ENSMLEG00000009339) #18	SYNPO2 (ENSMLEG00000039633) #19	SEC24D (ENSMLEG00000025052) #20	METTL14 (ENSMLEG00000022386) #21	PRSS12 (ENSMLEG00000033353) #22	NDST3 (ENSMLEG00000034414) #24	TRAM1L1 (ENSMLEG00000003344)	ENSMLEG00000035375	ENSMLEG00000030666
Sooty mangabey	MODERN SPECIES	348	TNIP3 (ENSCATG00000043498) #8	NDNF (ENSCATG00000031227) #9	PRDM5 (ENSCATG00000042510) #10	ENSCATG00000009459 #11	ENSCATG00000040684 ##12	ENSCATG00000039250	ENSCATG00000044697	PDE5A (ENSCATG00000030892) #13	FABP2 (ENSCATG00000029827) #15	ENSCATG00000029489 #16	USP53 (ENSCATG00000039375) #17	MYOZ2 (ENSCATG00000032371) #18	SYNPO2 (ENSCATG00000024146) #19	SEC24D (ENSCATG00000038872) #20	METTL14 (ENSCATG00000040790) #21	PRSS12 (ENSCATG00000042902) #22	NDST3 (ENSCATG00000041328) #24	TRAM1L1 (ENSCATG00000012900)	ENSCATG00000041278	NDST4 (ENSCATG00000032269) #28	UGT8 (ENSCATG00000042119) #29	ENSCATG00000009333	ARSJ (ENSCATG00000041348) #30	CAMK2D (ENSCATG00000036248)	ENSCATG00000045216	ANK2 (ENSCATG00000034561) #32	ENSCATG00000035943	LARP7 (ENSCATG00000043535) #35	ZGRF1 (ENSCATG00000030107) #36	NEUROG2 (ENSCATG00000012534) #37	ENSCATG00000044643
Vervet Monkey	MODERN SPECIES	26	ENSCSAG00000003716	QRFPR (ENSCSAG00000003717) #7	TNIP3 (ENSCSAG00000003720) #8	NDNF (ENSCSAG00000003726) #9	PRDM5 (ENSCSAG00000003729) #10	ENSCSAG00000003731 ##12	PDE5A (ENSCSAG00000003739) #13	FABP2 (ENSCSAG00000003744) #15	ENSCSAG00000003745 #16	USP53 (ENSCSAG00000003748) #17	ENSCSAG00000003749	MYOZ2 (ENSCSAG00000003751) #18	SYNPO2 (ENSCSAG00000003754) #19	SEC24D (ENSCSAG00000003757) #20	METTL14 (ENSCSAG00000003762) #21	PRSS12 (ENSCSAG00000003767) #22	NDST3 (ENSCSAG00000003772) #24	ENSCSAG00000000395	ENSCSAG00000000396	ENSCSAG00000000397	ENSCSAG00000000398	NDST4 (ENSCSAG00000003784) #28	UGT8 (ENSCSAG00000003787) #29	ARSJ (ENSCSAG00000003792) #30	ENSCSAG00000003794 #31	ANK2 (ENSCSAG00000003803) #32	LARP7 (ENSCSAG00000003810) #35	ZGRF1 (ENSCSAG00000003822) #36	NEUROG2 (ENSCSAG00000000399) #37	ENSCSAG00000000400	ALPK1 (ENSCSAG00000003833)
Rhinopithecus	ANCESTRAL SPECIES	338		ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155276.x.a.a.b #11	ENSGT00940000153395.a.rb.a #12	ENSGT00390000004950.k.b.a	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.c #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24
Golden snub-nosed monkey	MODERN SPECIES	1187						MAD2L1 (ENSRROG00000029952) #12	ENSRROG00000037054	PDE5A (ENSRROG00000038561) #13	FABP2 (ENSRROG00000028578) #15	ENSRROG00000011484 #16	USP53 (ENSRROG00000029034) #17	MYOZ2 (ENSRROG00000030760) #18	SYNPO2 (ENSRROG00000037131) #19	SEC24D (ENSRROG00000034389) #20	METTL14 (ENSRROG00000041175) #21	PRSS12 (ENSRROG00000033210) #22	NDST3 (ENSRROG00000035097) #24
Black snub-nosed monkey	MODERN SPECIES	352														SEC24D (ENSRBIG00000033140) #20	METTL14 (ENSRBIG00000035236) #21	PRSS12 (ENSRBIG00000034454) #22	NDST3 (ENSRBIG00000033546) #24
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172.c #15	ENSGT00800000124172.d #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000163819.b	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b.c #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b.s #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Cebidae	ANCESTRAL SPECIES	4	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00910000146657	ENSGT00940000153395.a.rb.b ##12	ENSGT00940000155475 #13	ENSGT00800000124172.c #15	ENSGT00800000124172.d #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000163819.b	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b.c #31	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b.s #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Marmoset	MODERN SPECIES	15	TNIP3 (ENSCJAG00000003110) #8	NDNF (ENSCJAG00000003128) #9	PRDM5 (ENSCJAG00000003133) #10	ENSCJAG00000064341	MAD2L1 (ENSCJAG00000003156) ##12	ENSCJAG00000068921	PDE5A (ENSCJAG00000003176) #13	ENSCJAG00000081825	FABP2 (ENSCJAG00000003228) #15	ENSCJAG00000045160 #16	USP53 (ENSCJAG00000003234) #17	MYOZ2 (ENSCJAG00000048574) #18	SYNPO2 (ENSCJAG00000003271) #19	SEC24D (ENSCJAG00000003283) #20	METTL14 (ENSCJAG00000003361) #21	PRSS12 (ENSCJAG00000003386) #22	NDST3 (ENSCJAG00000003390) #24	TRAM1L1 (ENSCJAG00000039409)	ENSCJAG00000033633	ENSCJAG00000072325	NDST4 (ENSCJAG00000003443) #28	UGT8 (ENSCJAG00000003461) #29	ENSCJAG00000053776	ENSCJAG00000075067	ARSJ (ENSCJAG00000070815) #30	ENSCJAG00000003480 #31	ANK2 (ENSCJAG00000003564) #32	ENSCJAG00000083059	ENSCJAG00000081336	LARP7 (ENSCJAG00000003711) #35	ENSCJAG00000072826
Cebidae_a	ANCESTRAL SPECIES	21	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00910000146657	ENSGT00940000153395.a.rb.b ##12	ENSGT00940000155475 #13	ENSGT00800000124172.c #15	ENSGT00800000124172.d #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000163819.b	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b.c #31	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b.s #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00390000002219	ENSGT00940000154340.A
Capuchin	MODERN SPECIES	17													ENSCCAG00000035980	SEC24D (ENSCCAG00000024324) #20	METTL14 (ENSCCAG00000037076) #21	PRSS12 (ENSCCAG00000027059) #22	ENSCCAG00000004975	NDST3 (ENSCCAG00000027057) #24	ENSCCAG00000013743	NDST4 (ENSCCAG00000027122) #28	UGT8 (ENSCCAG00000029029) #29	ARSJ (ENSCCAG00000025579) #30	ENSCCAG00000028679	CAMK2D (ENSCCAG00000032019)	ANK2 (ENSCCAG00000026200) #32	ENSCCAG00000026787 #35	ZGRF1 (ENSCCAG00000025909) #36	NEUROG2 (ENSCCAG00000020190) #37	ALPK1 (ENSCCAG00000025634)	AP1AR (ENSCCAG00000030915)	FAM241A (ENSCCAG00000018991)
Bolivian squirrel monkey	MODERN SPECIES	77							ENSSBOG00000031396 ##12	PDE5A (ENSSBOG00000023005) #13	FABP2 (ENSSBOG00000024247) #15	C4orf3 (ENSSBOG00000023534) #16	USP53 (ENSSBOG00000028212) #17	MYOZ2 (ENSSBOG00000026821) #18	SYNPO2 (ENSSBOG00000034132) #19	SEC24D (ENSSBOG00000029420) #20	METTL14 (ENSSBOG00000002153) #21	PRSS12 (ENSSBOG00000032683) #22	NDST3 (ENSSBOG00000021222) #24	TRAM1L1 (ENSSBOG00000019477)	CHRM2 (ENSSBOG00000007864)	ENSSBOG00000033871	DGKI (ENSSBOG00000027360)	CREB3L2 (ENSSBOG00000019462)	ENSSBOG00000020363	ENSSBOG00000032546	TRIM24 (ENSSBOG00000028491)	SVOPL (ENSSBOG00000006038)	ATP6V0A4 (ENSSBOG00000034625)	TMEM213 (ENSSBOG00000022765)	KIAA1549 (ENSSBOG00000020678)	ZC3HAV1L (ENSSBOG00000019747)	ZC3HAV1 (ENSSBOG00000027573)
Mas night monkey	MODERN SPECIES	1054	ENSANAG00000037751	QRFPR (ENSANAG00000036183) #7	TNIP3 (ENSANAG00000021165) #8	NDNF (ENSANAG00000021660) #9	PRDM5 (ENSANAG00000027411) #10	MAD2L1 (ENSANAG00000022503) #12	PDE5A (ENSANAG00000036136) #13	ENSANAG00000036422 #15	ENSANAG00000003057 #15	C4orf3 (ENSANAG00000034334) #16	USP53 (ENSANAG00000037495) #17	MYOZ2 (ENSANAG00000035756) #18	SYNPO2 (ENSANAG00000022499) #19	SEC24D (ENSANAG00000028409) #20	METTL14 (ENSANAG00000024273) #21	PRSS12 (ENSANAG00000024981) #22	ENSANAG00000035951	NDST3 (ENSANAG00000036048) #24	ENSANAG00000034376
Tarsier	MODERN SPECIES	3135																PRSS12 (ENSTSYG00000004697) #22	NDST3 (ENSTSYG00000001408) #24
Strepsirrhini	ANCESTRAL SPECIES	18				ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.rb.b ##12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Bushbaby	MODERN SPECIES	279			QRFPR (ENSOGAG00000000471) #7	ENSOGAG00000028056	TNIP3 (ENSOGAG00000001552) #8	NDNF (ENSOGAG00000001551) #9	PRDM5 (ENSOGAG00000009996) #10	ENSOGAG00000004054 ##12	PDE5A (ENSOGAG00000015526) #13	FABP2 (ENSOGAG00000001217) #15	USP53 (ENSOGAG00000015516) #17	MYOZ2 (ENSOGAG00000015513) #18	SYNPO2 (ENSOGAG00000000650) #19	SEC24D (ENSOGAG00000000648) #20	METTL14 (ENSOGAG00000000646) #21	PRSS12 (ENSOGAG00000016906) #22	NDST3 (ENSOGAG00000016904) #24	ENSOGAG00000031271
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.rb.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.a #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Lemuriformes_a	ANCESTRAL SPECIES	17	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.sb ##12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.a #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b
Coquerels sifaka	MODERN SPECIES	334	ODF3L2 (ENSPCOG00000000079)	ENSPCOG00000018550	THEG (ENSPCOG00000016271)	MIER2 (ENSPCOG00000019155)	PLPP2 (ENSPCOG00000013407)	TNIP3 (ENSPCOG00000020590) #8	PRDM5 (ENSPCOG00000022828) #10	MAD2L1 (ENSPCOG00000027663) ##12	PDE5A (ENSPCOG00000026986) #13	FABP2 (ENSPCOG00000027195) #15	C4orf3 (ENSPCOG00000019958) #16	USP53 (ENSPCOG00000027198) #17	MYOZ2 (ENSPCOG00000022294) #18	SYNPO2 (ENSPCOG00000022720) #19	SEC24D (ENSPCOG00000017275) #20	PRSS12 (ENSPCOG00000025893) #22	NDST3 (ENSPCOG00000014566) #24
Greater bamboo lemur	MODERN SPECIES	24			TNIP3 (ENSPSMG00000012835) #8	NDNF (ENSPSMG00000012816) #9	PRDM5 (ENSPSMG00000012774) #10	ENSPSMG00000012715 ##12	PDE5A (ENSPSMG00000012577) #13	FABP2 (ENSPSMG00000012427) #15	ENSPSMG00000012419 #16	USP53 (ENSPSMG00000012411) #17	MYOZ2 (ENSPSMG00000012405) #18	SYNPO2 (ENSPSMG00000012397) #19	ENSPSMG00000012395 ##19	SEC24D (ENSPSMG00000012336) #20	METTL14 (ENSPSMG00000012238) #21	ENSPSMG00000012204 #22	NDST3 (ENSPSMG00000012195) #24	TRAM1L1 (ENSPSMG00000012181)	ENSPSMG00000012179
Mouse lemur	MODERN SPECIES	20							OR7D4 (ENSMICG00000011232)	ZNF317 (ENSMICG00000031730)	OR1M1 (ENSMICG00000046584)	C4orf3 (ENSMICG00000047377) #16	ENSMICG00000009496 #17	MYOZ2 (ENSMICG00000002514) #18	SYNPO2 (ENSMICG00000009429) #19	SEC24D (ENSMICG00000009419) #20	METTL14 (ENSMICG00000013017) #21	PRSS12 (ENSMICG00000013009) #22	ENSMICG00000035358	NDST3 (ENSMICG00000006831) #24	ENSMICG00000031732	NDST4 (ENSMICG00000033837) #28	UGT8 (ENSMICG00000028102) #29	ARSJ (ENSMICG00000008144) #30	ENSMICG00000008129 #31	ANK2 (ENSMICG00000013698) #32	LARP7 (ENSMICG00000031035) #35	ZGRF1 (ENSMICG00000015802) #36	NEUROG2 (ENSMICG00000029773) #37	PLVAP (ENSMICG00000043750)	GTPBP3 (ENSMICG00000028047)	ANO8 (ENSMICG00000033075)	DDA1 (ENSMICG00000001763)
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Tree shrew	MODERN SPECIES	3183															METTL14 (ENSTBEG00000003518) #21	PRSS12 (ENSTBEG00000002594) #22	NDST3 (ENSTBEG00000001389) #24
Glires	ANCESTRAL SPECIES	8	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Lagomorpha	ANCESTRAL SPECIES	45																ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000162335	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789	ENSGT00940000156946
Rabbit	MODERN SPECIES	6	MGARP (ENSOCUG00000006499)	ELF2 (ENSOCUG00000003711)	NOCT (ENSOCUG00000005465)	SLC7A11 (ENSOCUG00000001662)	ENSOCUG00000002051	ENSOCUG00000009004	PCDH18 (ENSOCUG00000009057)	ENSOCUG00000032687	ENSOCUG00000026992	ENSOCUG00000030197	ENSOCUG00000035926	ENSOCUG00000036673	ENSOCUG00000038661	PABPC4L (ENSOCUG00000028226)	ENSOCUG00000033772	PRSS12 (ENSOCUG00000013625) #22	NDST3 (ENSOCUG00000009952) #24	ENSOCUG00000038669	TRAM1L1 (ENSOCUG00000003846)	ENSOCUG00000003691	ENSOCUG00000002295	NDST4 (ENSOCUG00000007796) #28	UGT8 (ENSOCUG00000015037) #29	ENSOCUG00000030939 #30	CAMK2D (ENSOCUG00000023650)	ENSOCUG00000035520	ANK2 (ENSOCUG00000010618) #32	ENSOCUG00000021222	LARP7 (ENSOCUG00000007073) #35	ZGRF1 (ENSOCUG00000007057) #36	NEUROG2 (ENSOCUG00000007063) #37
Pika	MODERN SPECIES	2835																PRSS12 (ENSOPRG00000006485) #22
Rodentia	ANCESTRAL SPECIES	13	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Rodentia_B	ANCESTRAL SPECIES	30	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Myomorpha	ANCESTRAL SPECIES	42	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Muroidea	ANCESTRAL SPECIES	53								ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000167903	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172.e #15	ENSGT00800000124172.f #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000167903	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172.e #15	ENSGT00800000124172.f #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000162789
Chinese hamster chok1gshd	MODERN SPECIES	66	Arhgap29 (ENSCGRG00001004416)	Abca4 (ENSCGRG00001017250)	Gclm (ENSCGRG00001009508)	Dnttip2 (ENSCGRG00001014053)	Bcar3 (ENSCGRG00001014093)	ENSCGRG00001003069	Fnbp1l (ENSCGRG00001024997)	Pde5a (ENSCGRG00001019282) #13	ENSCGRG00001025055 #15	ENSCGRG00001002393 #15	Usp53 (ENSCGRG00001017024) #17	Myoz2 (ENSCGRG00001025062) #18	Synpo2 (ENSCGRG00001020984) #19	Sec24d (ENSCGRG00001016224) #20	Mettl14 (ENSCGRG00001019193) #21	Prss12 (ENSCGRG00001013689) #22	ENSCGRG00001002914	Ndst3 (ENSCGRG00001018664) #24	Tram1l1 (ENSCGRG00001011117)	ENSCGRG00001021927	Ndst4 (ENSCGRG00001000958) #28	Ugt8a (ENSCGRG00001022137) #29	ENSCGRG00001005264	ENSCGRG00001016787	Arsj (ENSCGRG00001016057) #30	Camk2d (ENSCGRG00001016320) #31	Ank2 (ENSCGRG00001000397) #32	ENSCGRG00001013985	ENSCGRG00001025050 #35	Neurog2 (ENSCGRG00001004256) #37	Zgrf1 (ENSCGRG00001021317)
Golden Hamster	MODERN SPECIES	685	Arhgap29 (ENSMAUG00000005936)	ENSMAUG00000016162	Abca4 (ENSMAUG00000013300)	ENSMAUG00000014976	Dnttip2 (ENSMAUG00000017681)	Bcar3 (ENSMAUG00000017906)	Fnbp1l (ENSMAUG00000000261)	Pde5a (ENSMAUG00000000342) #13	Fabp2 (ENSMAUG00000005408) #15	1810037I17Rik (ENSMAUG00000000301) #16	Usp53 (ENSMAUG00000001112) #17	Myoz2 (ENSMAUG00000005996) #18	ENSMAUG00000003052 #19	Sec24d (ENSMAUG00000006147) #20	Mettl14 (ENSMAUG00000014022) #21	Prss12 (ENSMAUG00000005077) #22	Ndst3 (ENSMAUG00000010271) #24	Tram1l1 (ENSMAUG00000016594)	ENSMAUG00000003226 #28	Ugt8a (ENSMAUG00000007518) #29	Arsj (ENSMAUG00000009186) #30	ENSMAUG00000017460
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172.e #15	ENSGT00800000124172.f #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000167903	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Northern American deer mouse	MODERN SPECIES	19	ENSPEMG00000020249	Gclm (ENSPEMG00000013091)	Dnttip2 (ENSPEMG00000021990)	ENSPEMG00000025046	Bcar3 (ENSPEMG00000022437)	Fnbp1l (ENSPEMG00000021452)	Pde5a (ENSPEMG00000021406) #13	ENSPEMG00000029997 #15	ENSPEMG00000027603 #15	1810037I17Rik (ENSPEMG00000024687) #16	Usp53 (ENSPEMG00000022287) #17	Myoz2 (ENSPEMG00000011164) #18	Synpo2 (ENSPEMG00000017188) #19	Sec24d (ENSPEMG00000011288) #20	Mettl14 (ENSPEMG00000023538) #21	Prss12 (ENSPEMG00000008670) #22	Ndst3 (ENSPEMG00000021875) #24	Tram1l1 (ENSPEMG00000002510)	Ndst4 (ENSPEMG00000020444) #28	Ugt8a (ENSPEMG00000016253) #29	ENSPEMG00000025456	ENSPEMG00000024508	Arsj (ENSPEMG00000013281) #30	ENSPEMG00000015780	Ank2 (ENSPEMG00000022242) #32	ENSPEMG00000013978 #35	ENSPEMG00000012463 #36	ENSPEMG00000008182	Neurog2 (ENSPEMG00000027945) #37	Alpk1 (ENSPEMG00000004361)	Tifa (ENSPEMG00000024630)
Prairie vole	MODERN SPECIES	8	Abca4 (ENSMOCG00000018516)	Gclm (ENSMOCG00000001241)	Dnttip2 (ENSMOCG00000020034)	ENSMOCG00000022452	ENSMOCG00000015243	Fnbp1l (ENSMOCG00000010737)	Pde5a (ENSMOCG00000000585) #13	ENSMOCG00000000916 #15	ENSMOCG00000002308 #15	1810037I17Rik (ENSMOCG00000008059) #16	ENSMOCG00000012858 #17	Myoz2 (ENSMOCG00000019483) #18	Synpo2 (ENSMOCG00000012146) #19	Sec24d (ENSMOCG00000003445) #20	Mettl14 (ENSMOCG00000014583) #21	Prss12 (ENSMOCG00000021648) #22	Ndst3 (ENSMOCG00000020696) #24	Tram1l1 (ENSMOCG00000000986)	ENSMOCG00000000758	Ndst4 (ENSMOCG00000009321) #28	Ugt8a (ENSMOCG00000015965) #29	Arsj (ENSMOCG00000016673) #30	ENSMOCG00000014414	ENSMOCG00000018117 #32	ENSMOCG00000014933	ENSMOCG00000012519 #35	ENSMOCG00000019301 #36	ENSMOCG00000016693	Neurog2 (ENSMOCG00000001166) #37	Alpk1 (ENSMOCG00000019085)	Tifa (ENSMOCG00000004620)
Murinae	ANCESTRAL SPECIES	5	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000167903	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Mus	ANCESTRAL SPECIES	7	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000167903	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Mus_A	ANCESTRAL SPECIES	9	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000163685.k.b.a	ENSGT00940000167903	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.a.a ##35	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b
Mus_B	ANCESTRAL SPECIES	8	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000163685.k.b.a	ENSGT00940000167903	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.a.a ##35	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b
Mouse	MODERN SPECIES	12	Abcd3 (ENSMUSG00000028127)	Arhgap29 (ENSMUSG00000039831)	Abca4 (ENSMUSG00000028125)	Gclm (ENSMUSG00000028124)	Dnttip2 (ENSMUSG00000039756)	Bcar3 (ENSMUSG00000028121)	Fnbp1l (ENSMUSG00000039735)	Pde5a (ENSMUSG00000053965) #13	Fabp2 (ENSMUSG00000023057) #15	1810037I17Rik (ENSMUSG00000054091) #16	Usp53 (ENSMUSG00000039701) #17	Myoz2 (ENSMUSG00000028116) #18	Synpo2 (ENSMUSG00000050315) #19	Sec24d (ENSMUSG00000039234) #20	Mettl14 (ENSMUSG00000028114) #21	Prss12 (ENSMUSG00000027978) #22	Ndst3 (ENSMUSG00000027977) #24	Tram1l1 (ENSMUSG00000044528)	1700006A11Rik (ENSMUSG00000027973)	1700003H04Rik (ENSMUSG00000039174)	Ndst4 (ENSMUSG00000027971) #28	Ugt8a (ENSMUSG00000032854) #29	Arsj (ENSMUSG00000046561) #30	Camk2d (ENSMUSG00000053819) #31	Ank2 (ENSMUSG00000032826) #32	Larp7 (ENSMUSG00000027968) #35	Zgrf1 (ENSMUSG00000051278)	Neurog2 (ENSMUSG00000027967) #37	Alpk1 (ENSMUSG00000028028)	Tifa (ENSMUSG00000046688)	Ap1ar (ENSMUSG00000074238)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00950000182955.a.a.a	ENSGT00950000183110.b.b	ENSGT00940000155624.b	ENSGT00510000047658	ENSGT00510000048142	ENSGT00940000154130.a.a.b	ENSGT00950000183047.c.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000163685.k.b.a	ENSGT00940000167903	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.a.a ##35	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b
Steppe mouse	MODERN SPECIES	3290						Bcar3 (ENSMSIG00000014946)	Fnbp1l (ENSMSIG00000014989)	Pde5a (ENSMSIG00000015248) #13	Fabp2 (ENSMSIG00000016508) #15	1810037I17Rik (ENSMSIG00000016527) #16	Usp53 (ENSMSIG00000016537) #17	Myoz2 (ENSMSIG00000016617) #18	Synpo2 (ENSMSIG00000016629) #19	Sec24d (ENSMSIG00000016666) #20	Mettl14 (ENSMSIG00000016719) #21	Prss12 (ENSMSIG00000016761) #22	Ndst3 (ENSMSIG00000016807) #24	Tram1l1 (ENSMSIG00000016869)	1700006A11Rik (ENSMSIG00000016876)	1700003H04Rik (ENSMSIG00000016921)	Ndst4 (ENSMSIG00000016973) #28	ENSMSIG00000017033	Ugt8a (ENSMSIG00000017043) #29
spretus	MODERN SPECIES	12	Abcd3 (MGP_SPRETEiJ_G0026540)	Arhgap29 (MGP_SPRETEiJ_G0026541)	Abca4 (MGP_SPRETEiJ_G0026542)	Gclm (MGP_SPRETEiJ_G0026543)	Dnttip2 (MGP_SPRETEiJ_G0026544)	Fnbp1l (MGP_SPRETEiJ_G0026546)	Pde5a (MGP_SPRETEiJ_G0026547) #13	Fabp2 (MGP_SPRETEiJ_G0026548) #15	MGP_SPRETEiJ_G0026549	1810037I17Rik (MGP_SPRETEiJ_G0026550) #16	Usp53 (MGP_SPRETEiJ_G0026551) #17	Myoz2 (MGP_SPRETEiJ_G0026552) #18	Synpo2 (MGP_SPRETEiJ_G0026553) #19	Sec24d (MGP_SPRETEiJ_G0026554) #20	Mettl14 (MGP_SPRETEiJ_G0026555) #21	Prss12 (MGP_SPRETEiJ_G0026556) #22	Ndst3 (MGP_SPRETEiJ_G0026557) #24	Tram1l1 (MGP_SPRETEiJ_G0026558)	MGP_SPRETEiJ_G0026559	MGP_SPRETEiJ_G0026560	Ndst4 (MGP_SPRETEiJ_G0026561) #28	Ugt8a (MGP_SPRETEiJ_G0026562) #29	Arsj (MGP_SPRETEiJ_G0026563) #30	Camk2d (MGP_SPRETEiJ_G0026564) #31	MGP_SPRETEiJ_G0026565 #32	MGP_SPRETEiJ_G0026566 #35	MGP_SPRETEiJ_G0026567 ##35	Zgrf1 (MGP_SPRETEiJ_G0026568)	Neurog2 (MGP_SPRETEiJ_G0026569) #37	Alpk1 (MGP_SPRETEiJ_G0026570)	Tifa (MGP_SPRETEiJ_G0026571)
Ryukyu mouse	MODERN SPECIES	12	F3 (MGP_CAROLIEiJ_G0025588)	Abcd3 (MGP_CAROLIEiJ_G0025589)	Arhgap29 (MGP_CAROLIEiJ_G0025590)	MGP_CAROLIEiJ_G0025591	Gclm (MGP_CAROLIEiJ_G0025592)	Dnttip2 (MGP_CAROLIEiJ_G0025593)	Bcar3 (MGP_CAROLIEiJ_G0025594)	Fnbp1l (MGP_CAROLIEiJ_G0025595)	Pde5a (MGP_CAROLIEiJ_G0025596) #13	Fabp2 (MGP_CAROLIEiJ_G0025597) #15	Usp53 (MGP_CAROLIEiJ_G0025598) #17	Myoz2 (MGP_CAROLIEiJ_G0025599) #18	Synpo2 (MGP_CAROLIEiJ_G0025600) #19	Sec24d (MGP_CAROLIEiJ_G0025601) #20	Mettl14 (MGP_CAROLIEiJ_G0025602) #21	Prss12 (MGP_CAROLIEiJ_G0025603) #22	Ndst3 (MGP_CAROLIEiJ_G0025604) #24	Tram1l1 (MGP_CAROLIEiJ_G0025605)	1700006A11Rik (MGP_CAROLIEiJ_G0025606)	MGP_CAROLIEiJ_G0025607	Ndst4 (MGP_CAROLIEiJ_G0025608) #28	Ugt8a (MGP_CAROLIEiJ_G0025609) #29	Arsj (MGP_CAROLIEiJ_G0025610) #30	Camk2d (MGP_CAROLIEiJ_G0025611) #31	MGP_CAROLIEiJ_G0025612 #32	MGP_CAROLIEiJ_G0025613 #35	MGP_CAROLIEiJ_G0025614 ##35	Zgrf1 (MGP_CAROLIEiJ_G0025615)	Neurog2 (MGP_CAROLIEiJ_G0025616) #37	Alpk1 (MGP_CAROLIEiJ_G0025617)	Tifa (MGP_CAROLIEiJ_G0025618)
Shrew mouse	MODERN SPECIES	17	Abcd3 (MGP_PahariEiJ_G0027035)	Arhgap29 (MGP_PahariEiJ_G0027036)	Abca4 (MGP_PahariEiJ_G0027037)	Gclm (MGP_PahariEiJ_G0027038)	Dnttip2 (MGP_PahariEiJ_G0027039)	Bcar3 (MGP_PahariEiJ_G0027040)	Fnbp1l (MGP_PahariEiJ_G0027041)	Pde5a (MGP_PahariEiJ_G0027042) #13	Fabp2 (MGP_PahariEiJ_G0027043) #15	1810037I17Rik (MGP_PahariEiJ_G0027044) #16	Usp53 (MGP_PahariEiJ_G0027045) #17	Myoz2 (MGP_PahariEiJ_G0027046) #18	Synpo2 (MGP_PahariEiJ_G0027047) #19	Sec24d (MGP_PahariEiJ_G0027048) #20	Mettl14 (MGP_PahariEiJ_G0027049) #21	Prss12 (MGP_PahariEiJ_G0027050) #22	Ndst3 (MGP_PahariEiJ_G0027051) #24	Tram1l1 (MGP_PahariEiJ_G0027052)	MGP_PahariEiJ_G0027053	MGP_PahariEiJ_G0027054	Ndst4 (MGP_PahariEiJ_G0027055) #28	Ugt8a (MGP_PahariEiJ_G0027056) #29	Arsj (MGP_PahariEiJ_G0027057) #30	Camk2d (MGP_PahariEiJ_G0027058) #31	MGP_PahariEiJ_G0027059 #32	MGP_PahariEiJ_G0027060 #35	MGP_PahariEiJ_G0027061 #35	Zgrf1 (MGP_PahariEiJ_G0027062)	Neurog2 (MGP_PahariEiJ_G0027063) #37	Alpk1 (MGP_PahariEiJ_G0027064)	Tifa (MGP_PahariEiJ_G0027065)
Rat	MODERN SPECIES	11	Abcd3 (ENSRNOG00000011929)	Arhgap29 (ENSRNOG00000012563)	Gclm (ENSRNOG00000013409)	Dnttip2 (ENSRNOG00000025025)	Bcar3 (ENSRNOG00000013737)	Fnbp1l (ENSRNOG00000013798)	Pde5a (ENSRNOG00000014443) #13	Fabp2 (ENSRNOG00000024947) #15	C2h4orf3 (ENSRNOG00000014654) #16	Usp53 (ENSRNOG00000014660) #17	Myoz2 (ENSRNOG00000014815) #18	Synpo2 (ENSRNOG00000014867) #19	Sec24d (ENSRNOG00000014872) #20	ENSRNOG00000070921	Mettl14 (ENSRNOG00000015250) #21	Prss12 (ENSRNOG00000015353) #22	Ndst3 (ENSRNOG00000015781) #24	RGD1306519 (ENSRNOG00000024928)	RGD1306704 (ENSRNOG00000064712)	ENSRNOG00000069122	Ndst4 (ENSRNOG00000009577) #28	Ugt8 (ENSRNOG00000009345) #29	Arsj (ENSRNOG00000000001) #30	Camk2d (ENSRNOG00000011589) #31	Ank2 (ENSRNOG00000011076) #32	ENSRNOG00000062479	Larp7 (ENSRNOG00000048989) #35	Zgrf1 (ENSRNOG00000036980)	Neurog2 (ENSRNOG00000010972) #37	Alpk1 (ENSRNOG00000022636)	Tifa (ENSRNOG00000010941)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1310									Pde5a (ENSNGAG00000013958) #13	Fabp2 (ENSNGAG00000015837) #15	ENSNGAG00000011891 #17	Myoz2 (ENSNGAG00000011256) #18	Synpo2 (ENSNGAG00000003115) #19	Sec24d (ENSNGAG00000006632) #20	Mettl14 (ENSNGAG00000013681) #21	Prss12 (ENSNGAG00000008006) #22	Ndst3 (ENSNGAG00000002727) #24
Lesser Egyptian jerboa	MODERN SPECIES	67	Hpgds (ENSJJAG00000020796)	Qrfprl (ENSJJAG00000017977) #7	ENSJJAG00000000554	Ndnf (ENSJJAG00000023194) #9	Prdm5 (ENSJJAG00000011464) #10	Mad2l1 (ENSJJAG00000019335) #12	ENSJJAG00000014666	Pde5a (ENSJJAG00000018246) #13	Fabp2 (ENSJJAG00000016393) #15	1810037I17Rik (ENSJJAG00000014222) #16	ENSJJAG00000019057 #17	Myoz2 (ENSJJAG00000017680) #18	Synpo2 (ENSJJAG00000012840) #19	Sec24d (ENSJJAG00000009995) #20	Mettl14 (ENSJJAG00000010557) #21	Prss12 (ENSJJAG00000012007) #22	Ndst3 (ENSJJAG00000002218) #24	Tram1l1 (ENSJJAG00000020762)	ENSJJAG00000009441	ENSJJAG00000001081	ENSJJAG00000021020	Ndst4 (ENSJJAG00000014513) #28	Ugt8a (ENSJJAG00000012775) #29	Arsj (ENSJJAG00000021328) #30	ENSJJAG00000016290	ENSJJAG00000011390 #32	ENSJJAG00000000257 #35	ENSJJAG00000020978 #36	ENSJJAG00000019861	Neurog2 (ENSJJAG00000000627) #37	Alpk1 (ENSJJAG00000012764)
Kangaroo rat	MODERN SPECIES	389									Pde5a (ENSDORG00000013507) #13	Fabp2 (ENSDORG00000027810) #15	ENSDORG00000003913 #17	Myoz2 (ENSDORG00000008904) #18	Synpo2 (ENSDORG00000008902) #19	Sec24d (ENSDORG00000016009) #20	Mettl14 (ENSDORG00000016008) #21	Prss12 (ENSDORG00000013716) #22	Ndst3 (ENSDORG00000004309) #24	ENSDORG00000007384 #28	Ugt8a (ENSDORG00000026122) #29	Arsj (ENSDORG00000016246) #30	ENSDORG00000009228	ENSDORG00000006825 #32	ENSDORG00000008896 #35	ENSDORG00000023146 #36	ENSDORG00000029578	Neurog2 (ENSDORG00000026770) #37	Alpk1 (ENSDORG00000012751)	Tifa (ENSDORG00000028757)	ENSDORG00000025544	ENSDORG00000029098	ENSDORG00000002323
Rodentia_A	ANCESTRAL SPECIES	24	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Hystricomorpha	ANCESTRAL SPECIES	38	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000162789
Hystricomorpha_a	ANCESTRAL SPECIES	34	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000162789	ENSGT00940000168645
Guinea pig	MODERN SPECIES	7	EXOSC9 (ENSCPOG00000034344)	ANXA5 (ENSCPOG00000038586)	QRFPR (ENSCPOG00000001530) #7	TNIP3 (ENSCPOG00000003813) #8	NDNF (ENSCPOG00000009703) #9	PRDM5 (ENSCPOG00000012883) #10	MAD2L1 (ENSCPOG00000030145) #12	PDE5A (ENSCPOG00000008756) #13	FABP2 (ENSCPOG00000008750) #15	C4orf3 (ENSCPOG00000021561) #16	ENSCPOG00000001323 #17	MYOZ2 (ENSCPOG00000007291) #18	SYNPO2 (ENSCPOG00000020548) #19	SEC24D (ENSCPOG00000004621) #20	METTL14 (ENSCPOG00000037880) #21	PRSS12 (ENSCPOG00000010027) #22	NDST3 (ENSCPOG00000003838) #24
Hystricomorpha_b	ANCESTRAL SPECIES	75	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31
Degu	MODERN SPECIES	237	NDNF (ENSODEG00000008963) #9	PRDM5 (ENSODEG00000009133) #10	MAD2L1 (ENSODEG00000008659) #12	ENSODEG00000009337	ENSODEG00000009724	PDE5A (ENSODEG00000009775) #13	FABP2 (ENSODEG00000009356) #15	ENSODEG00000009751 #17	C4orf3 (ENSODEG00000009429) #16	MYOZ2 (ENSODEG00000010060) #18	SYNPO2 (ENSODEG00000008964) #19	ENSODEG00000009862	SEC24D (ENSODEG00000009782) #20	ENSODEG00000008761 #21	ENSODEG00000010268	PRSS12 (ENSODEG00000011205) #22	NDST3 (ENSODEG00000009516) #24
Long-tailed chinchilla	MODERN SPECIES	135	ENSCLAG00000005382	QRFPR (ENSCLAG00000006789) #7	TNIP3 (ENSCLAG00000004304) #8	NDNF (ENSCLAG00000004819) #9	PRDM5 (ENSCLAG00000005392) #10	ENSCLAG00000003295	MAD2L1 (ENSCLAG00000003756) #12	PDE5A (ENSCLAG00000004806) #13	FABP2 (ENSCLAG00000004293) #15	C4orf3 (ENSCLAG00000005064) #16	USP53 (ENSCLAG00000005403) #17	MYOZ2 (ENSCLAG00000003567) #18	SYNPO2 (ENSCLAG00000004412) #19	SEC24D (ENSCLAG00000009632) #20	METTL14 (ENSCLAG00000013189) #21	PRSS12 (ENSCLAG00000003330) #22	NDST3 (ENSCLAG00000004346) #24	TRAM1L1 (ENSCLAG00000016886)	NDST4 (ENSCLAG00000010385) #28	UGT8 (ENSCLAG00000006668) #29	ARSJ (ENSCLAG00000007365) #30	ENSCLAG00000004040 #31
Naked mole-rat female	MODERN SPECIES	22	PRDM5 (ENSHGLG00000003010) #10	ENSHGLG00000040170	ENSHGLG00000004064	ENSHGLG00000047434 #12	ENSHGLG00000000181	ENSHGLG00000049304	PDE5A (ENSHGLG00000000160) #13	ENSHGLG00000050894 #16	USP53 (ENSHGLG00000047262) #17	ENSHGLG00000045384	MYOZ2 (ENSHGLG00000004531) #18	SYNPO2 (ENSHGLG00000038567) #19	ENSHGLG00000045798	SEC24D (ENSHGLG00000002758) #20	METTL14 (ENSHGLG00000014068) #21	PRSS12 (ENSHGLG00000000672) #22	NDST3 (ENSHGLG00000001063) #24	ENSHGLG00000010801	ENSHGLG00000020132	ENSHGLG00000043408	ENSHGLG00000036019	ENSHGLG00000043810	ENSHGLG00000050492	ENSHGLG00000001759	ENSHGLG00000003859	ENSHGLG00000043941	ENSHGLG00000008087	ENSHGLG00000001281 #28	ENSHGLG00000036950	ENSHGLG00000000589 #29	ENSHGLG00000049200
Sciuridae	ANCESTRAL SPECIES	38	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT01060000248649.a	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00390000014067
Marmotini	ANCESTRAL SPECIES	123								ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT01060000248649.a	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00390000014067
Alpin marmot	MODERN SPECIES	145								PDE5A (ENSMMMG00000022246) #13	ENSMMMG00000022243	FABP2 (ENSMMMG00000022242) #15	ENSMMMG00000022227 #17	MYOZ2 (ENSMMMG00000022226) #18	SYNPO2 (ENSMMMG00000022215) #19	ENSMMMG00000021544	METTL14 (ENSMMMG00000021528) #21	PRSS12 (ENSMMMG00000021522) #22	CCDC190 (ENSMMMG00000021515)
Eurasian red squirrel	MODERN SPECIES	18	SMIM43 (ENSSVLG00005015189)	ANXA5 (ENSSVLG00005014980)	ENSSVLG00005014925	QRFPR (ENSSVLG00005014858) #7	NDNF (ENSSVLG00005014362) #9	PRDM5 (ENSSVLG00005014293) #10	MAD2L1 (ENSSVLG00005014204) #12	ENSSVLG00005014083	PDE5A (ENSSVLG00005013841) #13	FABP2 (ENSSVLG00005013640) #15	USP53 (ENSSVLG00005013592) #17	MYOZ2 (ENSSVLG00005013483) #18	ENSSVLG00005013417 ##19	SEC24D (ENSSVLG00005013288) #20	METTL14 (ENSSVLG00005013085) #21	PRSS12 (ENSSVLG00005012955) #22	ENSSVLG00005012895	ENSSVLG00005012798	ENSSVLG00005012769
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000154633	ENSGT00940000156916	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158131 #22
Common shrew	MODERN SPECIES	4454																PRSS12 (ENSSARG00000014544) #22
Hedgehog	MODERN SPECIES	5733																ENSEEUG00000007598 #22
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Suina	ANCESTRAL SPECIES	22	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789
Pig	MODERN SPECIES	16	ENSSSCG00000044436	ENSSSCG00000009102	MAD2L1 (ENSSSCG00000036256) #12	ENSSSCG00000009105	ENSSSCG00000053153	PDE5A (ENSSSCG00000009106) #13	ENSSSCG00000053989	FABP2 (ENSSSCG00000037272) #15	C4orf3 (ENSSSCG00000031773) #16	USP53 (ENSSSCG00000023174) #17	MYOZ2 (ENSSSCG00000052601) #18	ENSSSCG00000057074	SYNPO2 (ENSSSCG00000009111) #19	SEC24D (ENSSSCG00000009112) #20	METTL14 (ENSSSCG00000009113) #21	PRSS12 (ENSSSCG00000009114) #22	NDST3 (ENSSSCG00000009115) #24	ENSSSCG00000009116	ENSSSCG00000062356	TRAM1L1 (ENSSSCG00000036158)	NDST4 (ENSSSCG00000033834) #28	UGT8 (ENSSSCG00000031904) #29	ENSSSCG00000052698	ENSSSCG00000041159	ENSSSCG00000053761	ARSJ (ENSSSCG00000009122) #30	ENSSSCG00000063552	CAMK2D (ENSSSCG00000009123)	ENSSSCG00000009125 #32	ENSSSCG00000063375 #32	ENSSSCG00000055533
Chacoan peccary	MODERN SPECIES	119	TNIP3 (ENSCWAG00000018124) #8	NDNF (ENSCWAG00000018086) #9	PRDM5 (ENSCWAG00000017918) #10	MAD2L1 (ENSCWAG00000017871) #12	ENSCWAG00000017822	ENSCWAG00000017799	PDE5A (ENSCWAG00000017523) #13	ENSCWAG00000017457	FABP2 (ENSCWAG00000017424) #15	C4orf3 (ENSCWAG00000017402) #16	USP53 (ENSCWAG00000017367) #17	MYOZ2 (ENSCWAG00000017316) #18	SYNPO2 (ENSCWAG00000017183) #19	SEC24D (ENSCWAG00000017115) #20	METTL14 (ENSCWAG00000017035) #21	PRSS12 (ENSCWAG00000016952) #22	NDST3 (ENSCWAG00000016874) #24	TRAM1L1 (ENSCWAG00000016862)	ENSCWAG00000016840	NDST4 (ENSCWAG00000016745) #28	UGT8 (ENSCWAG00000016697) #29	ARSJ (ENSCWAG00000016636) #30	CAMK2D (ENSCWAG00000016305)	ANK2 (ENSCWAG00000011988) #32
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Cetacea	ANCESTRAL SPECIES	12	ENSGT00940000155988	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00510000046908.a.a.b #8	ENSGT00390000002565.y.b	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Odontoceti_a	ANCESTRAL SPECIES	22	ENSGT00510000046908.a.a.b #8	ENSGT00390000002565.y.b	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Dolphin	MODERN SPECIES	1498													SYNPO2 (ENSTTRG00000015181) #19	SEC24D (ENSTTRG00000015168) #20	METTL14 (ENSTTRG00000015160) #21	PRSS12 (ENSTTRG00000015151) #22	NDST3 (ENSTTRG00000015140) #24
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00390000002565.y.b	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003.j #21	ENSGT00550000075003.i #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000154502.q.b	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00390000002565.y.b	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00910000148620.c.a	ENSGT00390000009426.c.a.a.b	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003.j #21	ENSGT00550000075003.i #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000154502.q.b	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b
Narwhal	MODERN SPECIES	307	TNIP3 (ENSMMNG00015012386) #8	ENSMMNG00015012337	NDNF (ENSMMNG00015012321) #9	PRDM5 (ENSMMNG00015012286) #10	ENSMMNG00015012245	ENSMMNG00015012236	ENSMMNG00015012226 #12	PDE5A (ENSMMNG00015012174) #13	FABP2 (ENSMMNG00015012147) #15	ENSMMNG00015012139 #16	USP53 (ENSMMNG00015012113) #17	MYOZ2 (ENSMMNG00015012102) #18	SYNPO2 (ENSMMNG00015012079) #19	SEC24D (ENSMMNG00015012033) #20	METTL14 (ENSMMNG00015011950) #21	PRSS12 (ENSMMNG00015011918) #22	NDST3 (ENSMMNG00015011829) #24	TRAM1L1 (ENSMMNG00015011817)	ENSMMNG00015011803	NDST4 (ENSMMNG00015011789) #28	UGT8 (ENSMMNG00015011772) #29	ENSMMNG00015011754	ENSMMNG00015011738	ARSJ (ENSMMNG00015011719) #30	CAMK2D (ENSMMNG00015011648)	ENSMMNG00015011574	ANK2 (ENSMMNG00015010426) #32	LARP7 (ENSMMNG00015010021) #35	ZGRF1 (ENSMMNG00015010010) #36	NEUROG2 (ENSMMNG00015009986) #37	ALPK1 (ENSMMNG00015009971)
Beluga whale	MODERN SPECIES	77	TNIP3 (ENSDLEG00000016363) #8	ENSDLEG00000016349	NDNF (ENSDLEG00000016335) #9	PRDM5 (ENSDLEG00000016267) #10	ENSDLEG00000016246	ENSDLEG00000016241	MAD2L1 (ENSDLEG00000020615) #12	PDE5A (ENSDLEG00000020593) #13	FABP2 (ENSDLEG00000020585) #15	ENSDLEG00000020580 #16	USP53 (ENSDLEG00000020573) #17	MYOZ2 (ENSDLEG00000020565) #18	SYNPO2 (ENSDLEG00000020558) #19	SEC24D (ENSDLEG00000020547) #20	METTL14 (ENSDLEG00000020542) #21	PRSS12 (ENSDLEG00000020539) #22	NDST3 (ENSDLEG00000020520) #24	TRAM1L1 (ENSDLEG00000020512)	ENSDLEG00000020507	ENSDLEG00000020504	NDST4 (ENSDLEG00000020498) #28	UGT8 (ENSDLEG00000020492) #29	ENSDLEG00000020488	ENSDLEG00000020476	ARSJ (ENSDLEG00000020472) #30	ENSDLEG00000020461 #31	ANK2 (ENSDLEG00000018250) #32	LARP7 (ENSDLEG00000017694) #35	ENSDLEG00000017635 #36	ENSDLEG00000017599	NEUROG2 (ENSDLEG00000017587) #37
Vaquita	MODERN SPECIES	16	ENSPSNG00000000082	NDNF (ENSPSNG00000000138) #9	PRDM5 (ENSPSNG00000000220) #10	ENSPSNG00000000302	ENSPSNG00000000332	ENSPSNG00000000358	ENSPSNG00000000376 #12	PDE5A (ENSPSNG00000000435) #13	FABP2 (ENSPSNG00000000497) #15	USP53 (ENSPSNG00000000534) #17	MYOZ2 (ENSPSNG00000000556) #18	SYNPO2 (ENSPSNG00000000581) #19	SEC24D (ENSPSNG00000000727) #20	ENSPSNG00000000831	ENSPSNG00000000845 #21	PRSS12 (ENSPSNG00000000873) #22	NDST3 (ENSPSNG00000000913) #24	TRAM1L1 (ENSPSNG00000000943)	NDST4 (ENSPSNG00000000997) #28	ENSPSNG00000001031	UGT8 (ENSPSNG00000001045) #29	PCBD1 (ENSPSNG00000001067)	ENSPSNG00000001100	ARSJ (ENSPSNG00000001143) #30	CAMK2D (ENSPSNG00000001260)	ANK2 (ENSPSNG00000002558) #32	LARP7 (ENSPSNG00000004277) #35	ZGRF1 (ENSPSNG00000004382) #36	NEUROG2 (ENSPSNG00000004494) #37	ALPK1 (ENSPSNG00000004518)	TIFA (ENSPSNG00000004555)
Sperm whale	MODERN SPECIES	18	NDNF (ENSPCTG00005007456) #9	PRDM5 (ENSPCTG00005007313) #10	ENSPCTG00005007264	ENSPCTG00005007256	ENSPCTG00005007246	MAD2L1 (ENSPCTG00005007227) #12	PDE5A (ENSPCTG00005007066) #13	FABP2 (ENSPCTG00005007038) #15	ENSPCTG00005007026 #16	USP53 (ENSPCTG00005006925) #17	MYOZ2 (ENSPCTG00005006902) #18	ENSPCTG00005006878	SYNPO2 (ENSPCTG00005006802) #19	SEC24D (ENSPCTG00005006519) #20	METTL14 (ENSPCTG00005006463) #21	PRSS12 (ENSPCTG00005006417) #22	NDST3 (ENSPCTG00005006358) #24	TRAM1L1 (ENSPCTG00005006311)	ENSPCTG00005006288	ENSPCTG00005006257	NDST4 (ENSPCTG00005006211) #28	UGT8 (ENSPCTG00005006173) #29	ARSJ (ENSPCTG00005006151) #30	CAMK2D (ENSPCTG00005005855)	ANK2 (ENSPCTG00005003875) #32	ENSPCTG00005003723	LARP7 (ENSPCTG00005003701) #35	ZGRF1 (ENSPCTG00005003570) #36	NEUROG2 (ENSPCTG00005003546) #37	ALPK1 (ENSPCTG00005003520)	ENSPCTG00005003510
Blue whale	MODERN SPECIES	16	NDNF (ENSBMSG00010005099) #9	PRDM5 (ENSBMSG00010005080) #10	ENSBMSG00010022593	ENSBMSG00010022592	MAD2L1 (ENSBMSG00010022591) #12	PDE5A (ENSBMSG00010022590) #13	FABP2 (ENSBMSG00010022589) #15	ENSBMSG00010022588 #16	USP53 (ENSBMSG00010022587) #17	ENSBMSG00010022586	MYOZ2 (ENSBMSG00010022585) #18	SYNPO2 (ENSBMSG00010022583) #19	SEC24D (ENSBMSG00010022582) #20	METTL14 (ENSBMSG00010022581) #21	ENSBMSG00010022580	PRSS12 (ENSBMSG00010022579) #22	NDST3 (ENSBMSG00010022577) #24	ENSBMSG00010022576	TRAM1L1 (ENSBMSG00010022575)	ENSBMSG00010022574	NDST4 (ENSBMSG00010022573) #28	UGT8 (ENSBMSG00010022572) #29	ENSBMSG00010022571	ARSJ (ENSBMSG00010022570) #30	CAMK2D (ENSBMSG00010022569)	ENSBMSG00010022568	ANK2 (ENSBMSG00010015900) #32	ENSBMSG00010011560	LARP7 (ENSBMSG00010011549) #35	ZGRF1 (ENSBMSG00010011392) #36	NEUROG2 (ENSBMSG00010011337) #37
Pecora	ANCESTRAL SPECIES	15	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Percora_a	ANCESTRAL SPECIES	18	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Bovidae	ANCESTRAL SPECIES	18	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Bovinae	ANCESTRAL SPECIES	15	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000180978.b	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b
Bos	ANCESTRAL SPECIES	15	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.hb.a #12	ENSGT00940000163685.a	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT01100000263506.a.e.a.a.b.b.c.b	ENSGT00940000180978.b	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b
Bos_a	ANCESTRAL SPECIES	33	ENSGT00950000183130.A	ENSGT00940000155988.k	ENSGT01010000222815	ENSGT00940000155988.l	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000155475 #13	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT01100000263506.a.e.a.a.b.b.c.b	ENSGT00940000180978.b	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Wild yak	MODERN SPECIES	2988																PRSS12 (ENSBMUG00000015647) #22
Domestic yak	MODERN SPECIES	25	ENSBGRG00000006272	ENSBGRG00000006249	QRFPR (ENSBGRG00000006193) #7	TNIP3 (ENSBGRG00000005802) #8	NDNF (ENSBGRG00000005750) #9	PRDM5 (ENSBGRG00000005459) #10	ENSBGRG00000005429	PDE5A (ENSBGRG00000005023) #13	ENSBGRG00000004956	ENSBGRG00000004933 #16	USP53 (ENSBGRG00000004871) #17	MYOZ2 (ENSBGRG00000004836) #18	SYNPO2 (ENSBGRG00000004790) #19	SEC24D (ENSBGRG00000004688) #20	METTL14 (ENSBGRG00000004579) #21	PRSS12 (ENSBGRG00000004493) #22	ENSBGRG00000004478	NDST3 (ENSBGRG00000004409) #24	ENSBGRG00000004394	ENSBGRG00000004380	ENSBGRG00000004298	NDST4 (ENSBGRG00000004218) #28	UGT8 (ENSBGRG00000004157) #29	ENSBGRG00000004116	ARSJ (ENSBGRG00000004095) #30	CAMK2D (ENSBGRG00000003179)	ENSBGRG00000003089	ENSBGRG00000002655 #32	LARP7 (ENSBGRG00000002553) #35	ZGRF1 (ENSBGRG00000002512) #36	ENSBGRG00000002492 #37
Bos_b	ANCESTRAL SPECIES	14	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.hb.a #12	ENSGT00940000163685.a	ENSGT00940000155475 #13	ENSGT00800000124172.g #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT01100000263506.a.e.a.a.b.b.c.b	ENSGT00940000180978.b	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Cow	MODERN SPECIES	25	BBS7 (ENSBTAG00000004945)	CCNA2 (ENSBTAG00000004943)	EXOSC9 (ENSBTAG00000004942)	ANXA5 (ENSBTAG00000021746)	QRFPR (ENSBTAG00000008255) #7	NDNF (ENSBTAG00000010634) #9	PRDM5 (ENSBTAG00000012111) #10	PDE5A (ENSBTAG00000024888) #13	FABP2 (ENSBTAG00000017045) #15	C6H4orf3 (ENSBTAG00000048273) #16	USP53 (ENSBTAG00000010350) #17	MYOZ2 (ENSBTAG00000002574) #18	SYNPO2 (ENSBTAG00000006434) #19	SEC24D (ENSBTAG00000003619) #20	METTL14 (ENSBTAG00000014080) #21	PRSS12 (ENSBTAG00000020705) #22	NDST3 (ENSBTAG00000007316) #24	ENSBTAG00000034844	ENSBTAG00000034849	ENSBTAG00000052120	TRAM1L1 (ENSBTAG00000046440)	ENSBTAG00000048799	NDST4 (ENSBTAG00000003131) #28	UGT8 (ENSBTAG00000004574) #29	ENSBTAG00000052840	ENSBTAG00000050010	ARSJ (ENSBTAG00000017808) #30	CAMK2D (ENSBTAG00000014463) #31	ENSBTAG00000002392 #32	ENSBTAG00000048956 #32	ENSBTAG00000051025
Hybrid Bos Indicus	MODERN SPECIES	25	TNIP3 (ENSBIXG00005028738) #8	NDNF (ENSBIXG00005002378) #9	PRDM5 (ENSBIXG00005028611) #10	ENSBIXG00005028491 #12	ENSBIXG00005006635	ENSBIXG00005028397	PDE5A (ENSBIXG00005028330) #13	ENSBIXG00005028196 #15	C4orf3 (ENSBIXG00005028168) #16	USP53 (ENSBIXG00005006630) #17	MYOZ2 (ENSBIXG00005027989) #18	SYNPO2 (ENSBIXG00005027954) #19	ENSBIXG00005027911	SEC24D (ENSBIXG00005027886) #20	METTL14 (ENSBIXG00005006536) #21	PRSS12 (ENSBIXG00005027789) #22	NDST3 (ENSBIXG00005027695) #24	ENSBIXG00005027607	ENSBIXG00005027546	ENSBIXG00005004741	TRAM1L1 (ENSBIXG00005027523)	NDST4 (ENSBIXG00005027466) #28	UGT8 (ENSBIXG00005027418) #29	ARSJ (ENSBIXG00005004709) #30	ENSBIXG00005027265 #31	ANK2 (ENSBIXG00005027103) #32	LARP7 (ENSBIXG00005026718) #35	ZGRF1 (ENSBIXG00005026645) #36	NEUROG2 (ENSBIXG00005026506) #37	ALPK1 (ENSBIXG00005026470)	TIFA (ENSBIXG00005026412)
American bison	MODERN SPECIES	3275														SEC24D (ENSBBBG00000013046) #20	METTL14 (ENSBBBG00000013004) #21	PRSS12 (ENSBBBG00000012992) #22	NDST3 (ENSBBBG00000012976) #24	ENSBBBG00000012961	ENSBBBG00000012955	TRAM1L1 (ENSBBBG00000012950)
Caprinae	ANCESTRAL SPECIES	13	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685.d	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.m #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000164540	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00950000185425	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00390000015688.b	ENSGT00940000154589.b
Goat	MODERN SPECIES	25	QRFPR (ENSCHIG00000026596) #7	TNIP3 (ENSCHIG00000014328) #8	NDNF (ENSCHIG00000017486) #9	PRDM5 (ENSCHIG00000018772) #10	MAD2L1 (ENSCHIG00000025057) #12	ENSCHIG00000013097	PDE5A (ENSCHIG00000023222) #13	FABP2 (ENSCHIG00000022035) #15	ENSCHIG00000001816 #16	USP53 (ENSCHIG00000013642) #17	MYOZ2 (ENSCHIG00000012778) #18	SYNPO2 (ENSCHIG00000022266) #19	SEC24D (ENSCHIG00000025536) #20	METTL14 (ENSCHIG00000024680) #21	ENSCHIG00000019854	PRSS12 (ENSCHIG00000010763) #22	ENSCHIG00000024794	NDST3 (ENSCHIG00000015901) #24	TRAM1L1 (ENSCHIG00000016696)	ENSCHIG00000025361	ENSCHIG00000007981	ENSCHIG00000024102	ENSCHIG00000020267	ENSCHIG00000020941	NDST4 (ENSCHIG00000024955) #28	UGT8 (ENSCHIG00000017623) #29	ENSCHIG00000021703	ARSJ (ENSCHIG00000010979) #30	ENSCHIG00000009880 #31	ANK2 (ENSCHIG00000018205) #32	ENSCHIG00000014163 #35
Siberian musk deer	MODERN SPECIES	1271	ANXA5 (ENSMMSG00000017820)	QRFPR (ENSMMSG00000017721) #7	TNIP3 (ENSMMSG00000017595) #8	NDNF (ENSMMSG00000017569) #9	ENSMMSG00000017498 #10	MAD2L1 (ENSMMSG00000017450) #12	ENSMMSG00000017396	PDE5A (ENSMMSG00000017279) #13	FABP2 (ENSMMSG00000017233) #15	ENSMMSG00000017213 #16	USP53 (ENSMMSG00000017172) #17	MYOZ2 (ENSMMSG00000017140) #18	SYNPO2 (ENSMMSG00000017112) #19	SEC24D (ENSMMSG00000024289) #20	METTL14 (ENSMMSG00000024284) #21	PRSS12 (ENSMMSG00000024282) #22	NDST3 (ENSMMSG00000024279) #24	TRAM1L1 (ENSMMSG00000024274)	ENSMMSG00000024273	ENSMMSG00000024271	NDST4 (ENSMMSG00000024268) #28	UGT8 (ENSMMSG00000024267) #29	ARSJ (ENSMMSG00000024266) #30	CAMK2D (ENSMMSG00000024263)	ENSMMSG00000024258	ANK2 (ENSMMSG00000024111) #32	LARP7 (ENSMMSG00000024065) #35	ZGRF1 (ENSMMSG00000024057) #36	ENSMMSG00000024053	NEUROG2 (ENSMMSG00000024051) #37	ALPK1 (ENSMMSG00000024041)
Yarkand deer	MODERN SPECIES	8	TNIP3 (ENSCHYG00000017670) #8	NDNF (ENSCHYG00000017920) #9	PRDM5 (ENSCHYG00000018062) #10	ENSCHYG00000018636	ENSCHYG00000018659	PDE5A (ENSCHYG00000018720) #13	FABP2 (ENSCHYG00000019259) #15	ENSCHYG00000019324	C4orf3 (ENSCHYG00000019350) #16	USP53 (ENSCHYG00000019385) #17	MYOZ2 (ENSCHYG00000019531) #18	SYNPO2 (ENSCHYG00000019608) #19	SEC24D (ENSCHYG00000019930) #20	METTL14 (ENSCHYG00000020653) #21	ENSCHYG00000020777	PRSS12 (ENSCHYG00000020827) #22	NDST3 (ENSCHYG00000021158) #24	TRAM1L1 (ENSCHYG00000021312)	ENSCHYG00000021359	NDST4 (ENSCHYG00000021418) #28	UGT8 (ENSCHYG00000021551) #29	ENSCHYG00000021625	ENSCHYG00000021651	ARSJ (ENSCHYG00000021686) #30	ENSCHYG00000021709	CAMK2D (ENSCHYG00000021900)	ENSCHYG00000013660 #32	LARP7 (ENSCHYG00000016420) #35	ZGRF1 (ENSCHYG00000016563) #36	NEUROG2 (ENSCHYG00000016884) #37	ALPK1 (ENSCHYG00000016924)
Camelidae	ANCESTRAL SPECIES	20	ENSGT00640000091653	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Arabian camel	MODERN SPECIES	11	ENSCDRG00005003330	ENSCDRG00005003346	QRFPR (ENSCDRG00005003358) #7	TNIP3 (ENSCDRG00005003398) #8	NDNF (ENSCDRG00005003482) #9	PRDM5 (ENSCDRG00005003544) #10	MAD2L1 (ENSCDRG00005003818) #12	PDE5A (ENSCDRG00005003851) #13	FABP2 (ENSCDRG00005003970) #15	ENSCDRG00005004009 #16	USP53 (ENSCDRG00005004038) #17	MYOZ2 (ENSCDRG00005004113) #18	SYNPO2 (ENSCDRG00005004165) #19	SEC24D (ENSCDRG00005004247) #20	METTL14 (ENSCDRG00005004354) #21	PRSS12 (ENSCDRG00005004405) #22	NDST3 (ENSCDRG00005004436) #24	TRAM1L1 (ENSCDRG00005004454)	NDST4 (ENSCDRG00005004464) #28	UGT8 (ENSCDRG00005004475) #29	ARSJ (ENSCDRG00005004557) #30	ENSCDRG00005004623 #31	ANK2 (ENSCDRG00005005796) #32	ENSCDRG00005007533	ENSCDRG00005007568	ENSCDRG00005007588	ENSCDRG00005007603	LARP7 (ENSCDRG00005007625) #35	ENSCDRG00005007686 #36	ENSCDRG00005007817	NEUROG2 (ENSCDRG00005007881) #37
Alpaca	MODERN SPECIES	1569									PDE5A (ENSVPAG00000011070) #13	FABP2 (ENSVPAG00000011069) #15	USP53 (ENSVPAG00000011067) #17	MYOZ2 (ENSVPAG00000011065) #18	ENSVPAG00000011062 #19	SEC24D (ENSVPAG00000011060) #20	METTL14 (ENSVPAG00000011056) #21	PRSS12 (ENSVPAG00000011053) #22	NDST3 (ENSVPAG00000011046) #24
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Ursidae	ANCESTRAL SPECIES	17	ENSGT00940000155988.p	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT01070000254361	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT01100000264156.b	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335.d	ENSGT00940000162895 #37	ENSGT00940000159753
Ursus	ANCESTRAL SPECIES	74	ENSGT00940000155988.p	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475.c #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT01070000254361	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT01100000264156.b	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335.d	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
American black bear	MODERN SPECIES	1556														SEC24D (ENSUAMG00000027315) #20	METTL14 (ENSUAMG00000027301) #21	PRSS12 (ENSUAMG00000027300) #22
Polar bear	MODERN SPECIES	159	ANXA5 (ENSUMAG00000003835)	QRFPR (ENSUMAG00000003803) #7	TNIP3 (ENSUMAG00000003798) #8	NDNF (ENSUMAG00000003788) #9	PRDM5 (ENSUMAG00000003733) #10	MAD2L1 (ENSUMAG00000003710) #12	ENSUMAG00000003706	PDE5A (ENSUMAG00000003696) #13	FABP2 (ENSUMAG00000003687) #15	C4orf3 (ENSUMAG00000003683) #16	USP53 (ENSUMAG00000003650) #17	MYOZ2 (ENSUMAG00000003636) #18	SYNPO2 (ENSUMAG00000003620) #19	SEC24D (ENSUMAG00000003603) #20	METTL14 (ENSUMAG00000003593) #21	PRSS12 (ENSUMAG00000003572) #22	NDST3 (ENSUMAG00000003516) #24	TRAM1L1 (ENSUMAG00000003508)	ENSUMAG00000003496	NDST4 (ENSUMAG00000003448) #28	UGT8 (ENSUMAG00000003434) #29	ENSUMAG00000003424	ARSJ (ENSUMAG00000003417) #30	ENSUMAG00000003390 #31	ENSUMAG00000002854 #32	ENSUMAG00000002323 #32	LARP7 (ENSUMAG00000002263) #35	ENSUMAG00000002229 #36	ENSUMAG00000002195	ENSUMAG00000002189	ENSUMAG00000002186
Giant Panda	MODERN SPECIES	2	RCC2 (ENSAMEG00000000769)	ARHGEF10L (ENSAMEG00000000794)	ACTL8 (ENSAMEG00000000863)	IGSF21 (ENSAMEG00000017076)	KLHDC7A (ENSAMEG00000024992)	PAX7 (ENSAMEG00000017082)	ENSAMEG00000017108	ENSAMEG00000016894 #13	FABP2 (ENSAMEG00000016918) #15	CUNH4orf3 (ENSAMEG00000026955) #16	USP53 (ENSAMEG00000016922) #17	MYOZ2 (ENSAMEG00000016925) #18	SYNPO2 (ENSAMEG00000016930) #19	SEC24D (ENSAMEG00000011604) #20	METTL14 (ENSAMEG00000011578) #21	PRSS12 (ENSAMEG00000011572) #22	NDST3 (ENSAMEG00000011533) #24	TRAM1L1 (ENSAMEG00000028991)	ENSAMEG00000029330	ENSAMEG00000029857	NDST4 (ENSAMEG00000014571) #28	UGT8 (ENSAMEG00000014573) #29	ENSAMEG00000030424	ARSJ (ENSAMEG00000025956) #30	CAMK2D (ENSAMEG00000009200)	ANK2 (ENSAMEG00000009259) #32	LARP7 (ENSAMEG00000015642) #35	ZGRF1 (ENSAMEG00000015635) #36	ENSAMEG00000025601	NEUROG2 (ENSAMEG00000015618) #37	ALPK1 (ENSAMEG00000014797)
Mustelinae	ANCESTRAL SPECIES	113	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24
Ferret	MODERN SPECIES	183	EXOSC9 (ENSMPUG00000017410)	ANXA5 (ENSMPUG00000017411)	QRFPR (ENSMPUG00000017412) #7	TNIP3 (ENSMPUG00000017413) #8	NDNF (ENSMPUG00000017414) #9	PRDM5 (ENSMPUG00000017415) #10	MAD2L1 (ENSMPUG00000017416) #12	ENSMPUG00000017417	PDE5A (ENSMPUG00000017420) #13	FABP2 (ENSMPUG00000017421) #15	USP53 (ENSMPUG00000017422) #17	MYOZ2 (ENSMPUG00000017430) #18	SYNPO2 (ENSMPUG00000017431) #19	SEC24D (ENSMPUG00000017433) #20	METTL14 (ENSMPUG00000017434) #21	PRSS12 (ENSMPUG00000017435) #22	NDST3 (ENSMPUG00000017437) #24
American mink	MODERN SPECIES	144	ANXA5 (ENSNVIG00000013148)	QRFPR (ENSNVIG00000013132) #7	TNIP3 (ENSNVIG00000013062) #8	NDNF (ENSNVIG00000013039) #9	PRDM5 (ENSNVIG00000012926) #10	MD2L1 (ENSNVIG00000012901) #12	ENSNVIG00000012892	PDE5A (ENSNVIG00000012783) #13	FABPI (ENSNVIG00000012755) #15	C4orf3 (ENSNVIG00000012753) #16	USP53 (ENSNVIG00000012706) #17	MYOZ2 (ENSNVIG00000012700) #18	SYNPO2 (ENSNVIG00000012675) #19	SEC24D (ENSNVIG00000012626) #20	MTL14 (ENSNVIG00000012591) #21	PRSS12 (ENSNVIG00000012567) #22	NDST3 (ENSNVIG00000012542) #24
Canidae	ANCESTRAL SPECIES	40						ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00940000169764	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000154451.k.b.b	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT01070000254361	ENSGT00390000018086.z.j.b.a.b.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b
Canis_lupus	ANCESTRAL SPECIES	30					ENSGT00940000154197.b.b.`b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570.q #16	ENSGT00940000156337 #17	ENSGT00940000169764	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000154451.k.b.b	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000172584.c.b.a.a	ENSGT01070000254361	ENSGT01090000260040.b.b.b.b.b.e	ENSGT00390000018086.z.j.b.a.b.b	ENSGT00940000157168 #28	ENSGT00950000183178.a.q.b.a.b.a.a	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335
Dog	MODERN SPECIES	25						ENSCAFG00845030376	PDE5A (ENSCAFG00845030199) #13	FABP2 (ENSCAFG00845030144) #15	ENSCAFG00845030125 #16	USP53 (ENSCAFG00845030047) #17	MYOZ2 (ENSCAFG00845030005) #18	SYNPO2 (ENSCAFG00845029946) #19	SEC24D (ENSCAFG00845029774) #20	METTL14 (ENSCAFG00845029674) #21	ENSCAFG00845029655	PRSS12 (ENSCAFG00845029625) #22	NDST3 (ENSCAFG00845029512) #24	TRAM1L1 (ENSCAFG00845029459)	ENSCAFG00845029353	ENSCAFG00845029324	ENSCAFG00845029266	ENSCAFG00845029165	ENSCAFG00845029150	NDST4 (ENSCAFG00845029101) #28	ENSCAFG00845029073	UGT8 (ENSCAFG00845028928) #29	ENSCAFG00845028859	ARSJ (ENSCAFG00845028819) #30	CAMK2D (ENSCAFG00845028435)	ANK2 (ENSCAFG00845020611) #32	LARP7 (ENSCAFG00845017248) #35
Dingo	MODERN SPECIES	308				ENSCAFG00020017950	PDE5A (ENSCAFG00020017554) #13	FABP2 (ENSCAFG00020017519) #15	ENSCAFG00020017515 #16	USP53 (ENSCAFG00020017496) #17	ENSCAFG00020017490	MYOZ2 (ENSCAFG00020017484) #18	SYNPO2 (ENSCAFG00020017481) #19	ENSCAFG00020017478	SEC24D (ENSCAFG00020017464) #20	METTL14 (ENSCAFG00020017450) #21	ENSCAFG00020017446	PRSS12 (ENSCAFG00020017432) #22	NDST3 (ENSCAFG00020017398) #24	TRAM1L1 (ENSCAFG00020017395)	ENSCAFG00020017392	ENSCAFG00020017382	ENSCAFG00020017378	ENSCAFG00020017373	ENSCAFG00020017368	NDST4 (ENSCAFG00020017358) #28	ENSCAFG00020017353	UGT8 (ENSCAFG00020017350) #29	ENSCAFG00020017349	ENSCAFG00020017345	ARSJ (ENSCAFG00020017341) #30	ENSCAFG00020017332 #31	ENSCAFG00020017278 #32
Red fox	MODERN SPECIES	98						PDE5A (ENSVVUG00000008217) #13	FABP2 (ENSVVUG00000008206) #15	C4orf3 (ENSVVUG00000008204) #16	USP53 (ENSVVUG00000008187) #17	ENSVVUG00000008185	MYOZ2 (ENSVVUG00000008174) #18	SYNPO2 (ENSVVUG00000008167) #19	SEC24D (ENSVVUG00000008158) #20	METTL14 (ENSVVUG00000008131) #21	ENSVVUG00000008123	PRSS12 (ENSVVUG00000008117) #22	NDST3 (ENSVVUG00000008085) #24	TRAM1L1 (ENSVVUG00000008075)	ENSVVUG00000008040	ENSVVUG00000008039	ENSVVUG00000008001	ENSVVUG00000007997	ENSVVUG00000007981	NDST4 (ENSVVUG00000007972) #28	UGT8 (ENSVVUG00000007954) #29	ARSJ (ENSVVUG00000007950) #30	CAMK2D (ENSVVUG00000007922)	ENSVVUG00000005739 #32	ENSVVUG00000002513 #32	LARP7 (ENSVVUG00000002274) #35	ZGRF1 (ENSVVUG00000002203) #36
Felidae	ANCESTRAL SPECIES	4	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Panthera	ANCESTRAL SPECIES	5	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Panthera_a	ANCESTRAL SPECIES	2	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
lion	MODERN SPECIES	4	ANXA5 (ENSPLOG00000012713)	QRFPR (ENSPLOG00000012873) #7	TNIP3 (ENSPLOG00000012998) #8	NDNF (ENSPLOG00000013303) #9	PRDM5 (ENSPLOG00000013388) #10	MAD2L1 (ENSPLOG00000013801) #12	ENSPLOG00000013948	PDE5A (ENSPLOG00000014134) #13	FABP2 (ENSPLOG00000014469) #15	C4orf3 (ENSPLOG00000014512) #16	USP53 (ENSPLOG00000014535) #17	MYOZ2 (ENSPLOG00000014603) #18	SYNPO2 (ENSPLOG00000014681) #19	SEC24D (ENSPLOG00000014842) #20	METTL14 (ENSPLOG00000014973) #21	PRSS12 (ENSPLOG00000015046) #22	NDST3 (ENSPLOG00000015257) #24	TRAM1L1 (ENSPLOG00000015291)	ENSPLOG00000015306	NDST4 (ENSPLOG00000015328) #28	UGT8 (ENSPLOG00000015387) #29	ARSJ (ENSPLOG00000015439) #30	CAMK2D (ENSPLOG00000015618)	ANK2 (ENSPLOG00000021446) #32	ENSPLOG00000022734	LARP7 (ENSPLOG00000022736) #35	ZGRF1 (ENSPLOG00000022739) #36	NEUROG2 (ENSPLOG00000022741) #37	ALPK1 (ENSPLOG00000022742)	TIFA (ENSPLOG00000022743)	AP1AR (ENSPLOG00000022744)
leopard	MODERN SPECIES	3	QRFPR (ENSPPRG00000021780) #7	TNIP3 (ENSPPRG00000023814) #8	NDNF (ENSPPRG00000023532) #9	PRDM5 (ENSPPRG00000001020) #10	MAD2L1 (ENSPPRG00000001274) #12	ENSPPRG00000001481	PDE5A (ENSPPRG00000002118) #13	FABP2 (ENSPPRG00000002199) #15	C4orf3 (ENSPPRG00000002293) #16	USP53 (ENSPPRG00000002944) #17	MYOZ2 (ENSPPRG00000003221) #18	ENSPPRG00000009110	SYNPO2 (ENSPPRG00000010649) #19	SEC24D (ENSPPRG00000013417) #20	METTL14 (ENSPPRG00000013792) #21	PRSS12 (ENSPPRG00000014259) #22	NDST3 (ENSPPRG00000014924) #24	TRAM1L1 (ENSPPRG00000020668)	NDST4 (ENSPPRG00000020403) #28	UGT8 (ENSPPRG00000022073) #29	ENSPPRG00000023700	ARSJ (ENSPPRG00000023631) #30	ENSPPRG00000023296	CAMK2D (ENSPPRG00000008037)	ANK2 (ENSPPRG00000024801) #32	LARP7 (ENSPPRG00000023256) #35	ENSPPRG00000022757 #36	ENSPPRG00000000052	NEUROG2 (ENSPPRG00000021914) #37	ALPK1 (ENSPPRG00000001947)	TIFA (ENSPPRG00000022174)
Tiger	MODERN SPECIES	267	ANXA5 (ENSPTIG00000010178)	QRFPR (ENSPTIG00000010292) #7	TNIP3 (ENSPTIG00000010424) #8	NDNF (ENSPTIG00000010665) #9	PRDM5 (ENSPTIG00000010807) #10	MAD2L1 (ENSPTIG00000011046) #12	ENSPTIG00000011110	PDE5A (ENSPTIG00000011392) #13	FABP2 (ENSPTIG00000011486) #15	C4orf3 (ENSPTIG00000011587) #16	USP53 (ENSPTIG00000011597) #17	MYOZ2 (ENSPTIG00000011762) #18	SYNPO2 (ENSPTIG00000011832) #19	SEC24D (ENSPTIG00000012156) #20	METTL14 (ENSPTIG00000012504) #21	PRSS12 (ENSPTIG00000012530) #22	NDST3 (ENSPTIG00000012612) #24	TRAM1L1 (ENSPTIG00000009920)	NDST4 (ENSPTIG00000012808) #28	UGT8 (ENSPTIG00000012905) #29
Cat	MODERN SPECIES	235	QRFPR (ENSFCAG00000029517) #7	TNIP3 (ENSFCAG00000011004) #8	NDNF (ENSFCAG00000011003) #9	PRDM5 (ENSFCAG00000025656) #10	ENSFCAG00000029540	MAD2L1 (ENSFCAG00000027818) #12	ENSFCAG00000030366	PDE5A (ENSFCAG00000010364) #13	FABP2 (ENSFCAG00000026257) #15	CB1H4orf3 (ENSFCAG00000043946) #16	USP53 (ENSFCAG00000014472) #17	MYOZ2 (ENSFCAG00000003007) #18	SYNPO2 (ENSFCAG00000028738) #19	SEC24D (ENSFCAG00000007069) #20	METTL14 (ENSFCAG00000007068) #21	PRSS12 (ENSFCAG00000005100) #22	NDST3 (ENSFCAG00000005097) #24	NDST4 (ENSFCAG00000013922) #28	UGT8 (ENSFCAG00000027502) #29	ARSJ (ENSFCAG00000034327) #30	CAMK2D (ENSFCAG00000018151) #31	ANK2 (ENSFCAG00000005384) #32	ENSFCAG00000047277 #32	LARP7 (ENSFCAG00000031966) #35	ENSFCAG00000031710 #36	ENSFCAG00000046143	NEUROG2 (ENSFCAG00000010711) #37	ALPK1 (ENSFCAG00000010710)	TIFA (ENSFCAG00000042762)	AP1AR (ENSFCAG00000023040)	FAM241A (ENSFCAG00000043632)
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00640000091653	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Equus	ANCESTRAL SPECIES	24	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340.a #10	ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000153669.b.n	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219
Donkey	MODERN SPECIES	22	ANXA5 (ENSEASG00005018334)	QRFPR (ENSEASG00005018340) #7	TNIP3 (ENSEASG00005018349) #8	NDNF (ENSEASG00005018356) #9	ENSEASG00005018365 #10	MAD2L1 (ENSEASG00005018388) #12	ENSEASG00005026719	PDE5A (ENSEASG00005009800) #13	FABP2 (ENSEASG00005009711) #15	C4orf3 (ENSEASG00005009709) #16	USP53 (ENSEASG00005009707) #17	MYOZ2 (ENSEASG00005009706) #18	SYNPO2 (ENSEASG00005009703) #19	SEC24D (ENSEASG00005009700) #20	METTL14 (ENSEASG00005009697) #21	PRSS12 (ENSEASG00005009686) #22	NDST3 (ENSEASG00005009682) #24	ENSEASG00005009678	TRAM1L1 (ENSEASG00005030554)	NDST4 (ENSEASG00005009672) #28	UGT8 (ENSEASG00005009669) #29	ARSJ (ENSEASG00005009667) #30	CAMK2D (ENSEASG00005009042)	ANK2 (ENSEASG00005005871) #32	LARP7 (ENSEASG00005005592) #35	ZGRF1 (ENSEASG00005005589) #36	ALPK1 (ENSEASG00005005579)	TIFA (ENSEASG00005023815)	AP1AR (ENSEASG00005032830)	ENSEASG00005025146	PITX2 (ENSEASG00005005562)
Horse	MODERN SPECIES	11	TNIP3 (ENSECAG00000010953) #8	NDNF (ENSECAG00000011459) #9	PRDM5 (ENSECAG00000011516) #10	ENSECAG00000028123	ENSECAG00000046674	ENSECAG00000013880	PDE5A (ENSECAG00000013957) #13	FABP2 (ENSECAG00000016345) #15	C2H4orf3 (ENSECAG00000016365) #16	USP53 (ENSECAG00000016383) #17	MYOZ2 (ENSECAG00000017431) #18	SYNPO2 (ENSECAG00000018218) #19	SEC24D (ENSECAG00000018309) #20	ENSECAG00000048147	METTL14 (ENSECAG00000021458) #21	PRSS12 (ENSECAG00000022348) #22	NDST3 (ENSECAG00000022398) #24	ENSECAG00000022993	TRAM1L1 (ENSECAG00000002313)	NDST4 (ENSECAG00000023013) #28	ENSECAG00000031729	UGT8 (ENSECAG00000024269) #29	ENSECAG00000058627	ARSJ (ENSECAG00000024322) #30	CAMK2D (ENSECAG00000024339) #31	ANK2 (ENSECAG00000024436) #32	ENSECAG00000025067	LARP7 (ENSECAG00000000834) #35	ZGRF1 (ENSECAG00000002675) #36	NEUROG2 (ENSECAG00000035491) #37	ALPK1 (ENSECAG00000007247)
Chiroptera	ANCESTRAL SPECIES	36	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475.f #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337.h #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Megabat	MODERN SPECIES	1876																PRSS12 (ENSPVAG00000017635) #22	NDST3 (ENSPVAG00000017634) #24
Microchiroptera	ANCESTRAL SPECIES	38	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475.f #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337.h #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Greater horseshoe bat	MODERN SPECIES	9	EXOSC9 (ENSRFEG00010008091)	ENSRFEG00010007759	QRFPR (ENSRFEG00010007677) #7	TNIP3 (ENSRFEG00010007514) #8	NDNF (ENSRFEG00010007480) #9	PRDM5 (ENSRFEG00010007397) #10	ENSRFEG00010007352 #12	PDE5A (ENSRFEG00010007136) #13	FABP2 (ENSRFEG00010007055) #15	ENSRFEG00010007022 #16	USP53 (ENSRFEG00010006951) #17	MYOZ2 (ENSRFEG00010019470) #18	SYNPO2 (ENSRFEG00010019404) #19	SEC24D (ENSRFEG00010019312) #20	METTL14 (ENSRFEG00010019257) #21	PRSS12 (ENSRFEG00010019073) #22	NDST3 (ENSRFEG00010018567) #24	TRAM1L1 (ENSRFEG00010018522)	NDST4 (ENSRFEG00010018483) #28	UGT8 (ENSRFEG00010018451) #29	ARSJ (ENSRFEG00010018415) #30	CAMK2D (ENSRFEG00010018229)	ANK2 (ENSRFEG00010017829) #32	LARP7 (ENSRFEG00010017573) #35	ENSRFEG00010017544 #36	ENSRFEG00010017511	NEUROG2 (ENSRFEG00010017497) #37	ALPK1 (ENSRFEG00010017464)	TIFA (ENSRFEG00010017447)	AP1AR (ENSRFEG00010017404)	ENSRFEG00010017375
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1575															METTL14 (ENSMLUG00000003235) #21	ENSMLUG00000002935 #22	ENSMLUG00000024525	ENSMLUG00000001710
Microbat	MODERN SPECIES	723																ENSMLUG00000024574 #22
Atlantogenata	ANCESTRAL SPECIES	57								ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A
Afrotheria	ANCESTRAL SPECIES	67								ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000156946
Afrotheria_a	ANCESTRAL SPECIES	62								ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00530000064570 #16	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00510000046470.a.a.a.d.b	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000156946
Elephant	MODERN SPECIES	95	ENSLAFG00000026735 #12	ENSLAFG00000028727	ENSLAFG00000031509	ENSLAFG00000028982 #12	ENSLAFG00000029159	ENSLAFG00000030022 #12	ENSLAFG00000025884	PDE5A (ENSLAFG00000022606) #13	FABP2 (ENSLAFG00000026610) #15	C4orf3 (ENSLAFG00000005175) #16	USP53 (ENSLAFG00000015483) #17	MYOZ2 (ENSLAFG00000015471) #18	SYNPO2 (ENSLAFG00000022538) #19	SEC24D (ENSLAFG00000001863) #20	METTL14 (ENSLAFG00000001857) #21	PRSS12 (ENSLAFG00000007466) #22	NDST3 (ENSLAFG00000021526) #24	TRAM1L1 (ENSLAFG00000029932)	NDST4 (ENSLAFG00000016988) #28	UGT8 (ENSLAFG00000000017) #29	ENSLAFG00000028997	ARSJ (ENSLAFG00000010599) #30	CAMK2D (ENSLAFG00000004718)	ENSLAFG00000030524 #32	ENSLAFG00000028722	LARP7 (ENSLAFG00000015769) #35	ENSLAFG00000015144 #36	ENSLAFG00000015140	ALPK1 (ENSLAFG00000015129)	TIFA (ENSLAFG00000009392)	AP1AR (ENSLAFG00000009389)
Hyrax	MODERN SPECIES	4712																PRSS12 (ENSPCAG00000007929) #22
Tenrec	MODERN SPECIES	5580																PRSS12 (ENSETEG00000018049) #22
Xenarthra	ANCESTRAL SPECIES	427							ENSGT00940000153395.a #12	ENSGT00940000163685	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24
Armadillo	MODERN SPECIES	3937				PRDM5 (ENSDNOG00000002009) #10	ENSDNOG00000045818	MAD2L1 (ENSDNOG00000013456) #12	ENSDNOG00000039792	ENSDNOG00000031112	PDE5A (ENSDNOG00000010114) #13	FABP2 (ENSDNOG00000036022) #15	USP53 (ENSDNOG00000003596) #17	MYOZ2 (ENSDNOG00000048160) #18	SYNPO2 (ENSDNOG00000041225) #19	SEC24D (ENSDNOG00000008271) #20	METTL14 (ENSDNOG00000002149) #21	PRSS12 (ENSDNOG00000019225) #22	NDST3 (ENSDNOG00000005700) #24
Sloth	MODERN SPECIES	5105																PRSS12 (ENSCHOG00000005985) #22
Marsupialia	ANCESTRAL SPECIES	21	ENSGT00940000155372.o	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000165291	ENSGT00940000160287	ENSGT00390000006975	ENSGT00940000157326	ENSGT00940000159168	ENSGT00950000183162.b	ENSGT00390000006260	ENSGT00550000074618.a.b	ENSGT00390000018326	ENSGT00940000156986	ENSGT00390000011749	ENSGT00410000029064	ENSGT00940000159617	ENSGT00390000017890	ENSGT01030000234564.a.a.b.b
Marsupialia_b	ANCESTRAL SPECIES	22	ENSGT00940000155372.o	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.m #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000165291	ENSGT00940000160287	ENSGT00390000006975	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.b.a.a.a.b.a.a.b.a	ENSGT00940000157326	ENSGT00940000159168	ENSGT00950000183162.b	ENSGT00390000006260	ENSGT00550000074618.a.b	ENSGT00390000018326	ENSGT00940000156986	ENSGT00390000011749	ENSGT00410000029064	ENSGT00940000159617	ENSGT00390000017890
Diprotodontia	ANCESTRAL SPECIES	25	ENSGT00990000214280	ENSGT00940000155372.o	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.m #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000165291	ENSGT00940000160287	ENSGT00390000006975	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.b.a.a.a.b.a.a.b.a	ENSGT00940000157326	ENSGT00940000159168	ENSGT00950000183162.b	ENSGT00390000006260	ENSGT00550000074618.a.b	ENSGT00390000018326	ENSGT00940000156986	ENSGT00410000029064	ENSGT00390000011749	ENSGT00940000159617	ENSGT00390000017890
Diprotodontia_a	ANCESTRAL SPECIES	26	ENSGT00990000214280	ENSGT00940000155372.o	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a.m #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000165291	ENSGT00940000160287	ENSGT00390000006975	ENSGT00950000182890.D.c.b.a.b.b.b.c.a.b.a.a.a.b.a.a.b.a	ENSGT00940000157326	ENSGT00940000159168	ENSGT00950000183162.b	ENSGT00390000006260	ENSGT00550000074618.a.b	ENSGT00390000018326	ENSGT00940000156986	ENSGT00410000029064	ENSGT00390000011749	ENSGT00940000159617	ENSGT00390000017890
koala	MODERN SPECIES	128	SMIM43 (ENSPCIG00000033092)	ENSPCIG00000027984	ANXA5 (ENSPCIG00000027985)	QRFPR (ENSPCIG00000004122) #7	ENSPCIG00000036238	NDNF (ENSPCIG00000004131) #9	PRDM5 (ENSPCIG00000004135) #10	ENSPCIG00000020514 #12	PDE5A (ENSPCIG00000020522) #13	FABP2 (ENSPCIG00000020530) #15	USP53 (ENSPCIG00000020533) #17	MYOZ2 (ENSPCIG00000020536) #18	SYNPO2 (ENSPCIG00000011228) #19	SEC24D (ENSPCIG00000020540) #20	METTL14 (ENSPCIG00000020546) #21	PRSS12 (ENSPCIG00000034363) #22	ENSPCIG00000020554	FUT10 (ENSPCIG00000020559)	CLDN23 (ENSPCIG00000020563)	ENSPCIG00000020566	ENSPCIG00000034056	NRG1 (ENSPCIG00000011488)	WRN (ENSPCIG00000020146)	PURG (ENSPCIG00000026703)	ENSPCIG00000016064	PPP2CB (ENSPCIG00000016066)	ENSPCIG00000016069	ENSPCIG00000001859	GTF2E2 (ENSPCIG00000019303)	ENSPCIG00000002084	ENSPCIG00000019307
Common wonbat	MODERN SPECIES	641	EXOSC9 (ENSVURG00010012379)	ENSVURG00010012372	ANXA5 (ENSVURG00010012364)	QRFPR (ENSVURG00010012358) #7	ENSVURG00010012356	NDNF (ENSVURG00010012353) #9	PRDM5 (ENSVURG00010012287) #10	MAD2L1 (ENSVURG00010012269) #12	PDE5A (ENSVURG00010012234) #13	FABP2 (ENSVURG00010012222) #15	USP53 (ENSVURG00010012212) #17	MYOZ2 (ENSVURG00010012206) #18	SYNPO2 (ENSVURG00010012195) #19	SEC24D (ENSVURG00010012166) #20	METTL14 (ENSVURG00010012138) #21	PRSS12 (ENSVURG00010012119) #22	ENSVURG00010012113	FUT10 (ENSVURG00010012101)	CLDN23 (ENSVURG00010012090)	ENSVURG00010012087	NRG1 (ENSVURG00010012066)	WRN (ENSVURG00010012030)	PURG (ENSVURG00010012021)	PPP2CB (ENSVURG00010012014)	ENSVURG00010012003	GSR (ENSVURG00010011844)	SMIM18 (ENSVURG00010011822)	ENSVURG00010011811	ENSVURG00010011806	ENSVURG00010011794	DUSP4 (ENSVURG00010011629)
Wallaby	MODERN SPECIES	6940																PRSS12 (ENSMEUG00000005555) #22
Tasmanian devil	MODERN SPECIES	5	SMIM43 (ENSSHAG00000023755)	ANXA5 (ENSSHAG00000005161)	ENSSHAG00000028698 #7	NDNF (ENSSHAG00000008125) #9	ENSSHAG00000003919	PRDM5 (ENSSHAG00000003250) #10	MAD2L1 (ENSSHAG00000008494) #12	PDE5A (ENSSHAG00000009344) #13	FABP2 (ENSSHAG00000010832) #15	USP53 (ENSSHAG00000011019) #17	MYOZ2 (ENSSHAG00000011793) #18	SYNPO2 (ENSSHAG00000012401) #19	ENSSHAG00000022135	SEC24D (ENSSHAG00000014053) #20	METTL14 (ENSSHAG00000014237) #21	ENSSHAG00000022088 #22	ENSSHAG00000029943	ENSSHAG00000015329	ENSSHAG00000016586	WRN (ENSSHAG00000005577)	PURG (ENSSHAG00000027401)	ENSSHAG00000027177	PPP2CB (ENSSHAG00000008510)	ENSSHAG00000008767	GSR (ENSSHAG00000021958)	GTF2E2 (ENSSHAG00000009797)	SMIM18 (ENSSHAG00000029469)	ENSSHAG00000030113	DCTN6 (ENSSHAG00000011698)	MBOAT4 (ENSSHAG00000021150)	LEPROTL1 (ENSSHAG00000011880)
Opossum	MODERN SPECIES	4	ENSMODG00000044318	ENSMODG00000018936	ENSMODG00000018937	QRFPR (ENSMODG00000018939) #7	NDNF (ENSMODG00000042861) #9	ENSMODG00000027696	PRDM5 (ENSMODG00000018942) #10	MAD2L1 (ENSMODG00000018944) #12	PDE5A (ENSMODG00000018947) #13	FABP2 (ENSMODG00000018949) #15	USP53 (ENSMODG00000018951) #17	MYOZ2 (ENSMODG00000041210) #18	SYNPO2 (ENSMODG00000018955) #19	SEC24D (ENSMODG00000018960) #20	ENSMODG00000050591 #21	PRSS12 (ENSMODG00000018976) #22	ENSMODG00000028733	FUT10 (ENSMODG00000018984)	ENSMODG00000047638	ENSMODG00000018986	NRG1 (ENSMODG00000018991)	ENSMODG00000018992	ENSMODG00000038176	WRN (ENSMODG00000018997)	ENSMODG00000040363	PURG (ENSMODG00000018998)	ENSMODG00000047912	PPP2CB (ENSMODG00000019001)	ENSMODG00000019003	GSR (ENSMODG00000019004)	GTF2E2 (ENSMODG00000019005)
Platypus	MODERN SPECIES	3	MGST2 (ENSOANG00000015288)	SETD7 (ENSOANG00000015287)	RAB33B (ENSOANG00000036558)	ENSOANG00000008971	NAA15 (ENSOANG00000008970)	NDUFC1 (ENSOANG00000039590)	ENSOANG00000043598	ELF2 (ENSOANG00000047361)	NOCT (ENSOANG00000013761)	ENSOANG00000013762	SMARCAD1 (ENSOANG00000013764)	GRID2 (ENSOANG00000013766)	ENSOANG00000047963	CCSER1 (ENSOANG00000014947)	MMRN1 (ENSOANG00000014945)	PRSS12 (ENSOANG00000014944) #22	NDST3 (ENSOANG00000014942) #24	NDST4 (ENSOANG00000009292) #28	ENSOANG00000037777	UGT8 (ENSOANG00000050420) #29	ARSJ (ENSOANG00000044613) #30	ENSOANG00000009295 #31	ANK2 (ENSOANG00000009296) #32	LARP7 (ENSOANG00000009298) #35	ENSOANG00000009299	ENSOANG00000044444	NEUROG2 (ENSOANG00000047178) #37	ALPK1 (ENSOANG00000009300)	ENSOANG00000050963	AP1AR (ENSOANG00000009302)	FAM241A (ENSOANG00000000694)
Sauria	ANCESTRAL SPECIES	6	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162642 #36	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789
Archelosauria	ANCESTRAL SPECIES	4	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000167092	ENSGT00940000155114	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00940000158465	ENSGT00940000159547	ENSGT00940000153664.A.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00940000159295	ENSGT00940000159264	ENSGT00940000157168 #28
Cryptodira	ANCESTRAL SPECIES	2	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000167092	ENSGT00940000155114	ENSGT00940000160229	ENSGT00950000183196.A	ENSGT00940000160933	ENSGT00940000158465	ENSGT00940000159547	ENSGT00940000153664.A.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520.y	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31
Testudinoidea	ANCESTRAL SPECIES	10	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665.b #24	ENSGT00940000153664.A.a	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a	ENSGT00390000014293.a	ENSGT00940000161376	ENSGT00940000154194	ENSGT00940000158205	ENSGT00940000155196	ENSGT00940000162645	ENSGT00940000162708.b.b	ENSGT00940000162708.b.a	ENSGT00940000164026
Emydidae	ANCESTRAL SPECIES	1	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665.b #24	ENSGT00940000153664.A.a	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000155150.a
Three-toed box turtle	MODERN SPECIES	26	ANXA5 (ENSTMTG00000004342)	QRFPR (ENSTMTG00000004301) #7	ENSTMTG00000004235 #8	NDNF (ENSTMTG00000004222) #9	PRDM5 (ENSTMTG00000004033) #10	MAD2L1 (ENSTMTG00000003998) #12	RPL7L1 (ENSTMTG00000003978)	PDE5A (ENSTMTG00000003878) #13	FABP2 (ENSTMTG00000003857) #15	ENSTMTG00000003845	USP53 (ENSTMTG00000003810) #17	MYOZ2 (ENSTMTG00000003789) #18	SYNPO2 (ENSTMTG00000003764) #19	SEC24D (ENSTMTG00000003712) #20	METTL14 (ENSTMTG00000003688) #21	PRSS12 (ENSTMTG00000003631) #22	NDST3 (ENSTMTG00000003404) #24	ENSTMTG00000003352	NDST4 (ENSTMTG00000003313) #28	UGT8 (ENSTMTG00000003304) #29	ARSJ (ENSTMTG00000003289) #30	ENSTMTG00000003212 #31
painted turtle	MODERN SPECIES	723	ANXA5 (ENSCPBG00000024727)	QRFPR (ENSCPBG00000024728) #7	TNIP3 (ENSCPBG00000024730) #8	NDNF (ENSCPBG00000024732) #9	PRDM5 (ENSCPBG00000024735) #10	MAD2L1 (ENSCPBG00000024740) #12	RPL7L1 (ENSCPBG00000024742)	PDE5A (ENSCPBG00000024747) #13	FABP2 (ENSCPBG00000024751) #15	ENSCPBG00000024754	USP53 (ENSCPBG00000024758) #17	MYOZ2 (ENSCPBG00000024760) #18	SYNPO2 (ENSCPBG00000024764) #19	SEC24D (ENSCPBG00000024767) #20	METTL14 (ENSCPBG00000024769) #21	PRSS12 (ENSCPBG00000024770) #22	NDST3 (ENSCPBG00000024773) #24	ENSCPBG00000024774	NDST4 (ENSCPBG00000024777) #28	UGT8 (ENSCPBG00000024780) #29	ARSJ (ENSCPBG00000024782) #30	CAMK2D (ENSCPBG00000024786)
Testudinidae	ANCESTRAL SPECIES	11	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665.b #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31
Abingdon island giant tortoise	MODERN SPECIES	2380		TNIP3 (ENSCABG00000006117) #8	NDNF (ENSCABG00000006116) #9	PRDM5 (ENSCABG00000006004) #10	MAD2L1 (ENSCABG00000005976) #12	RPL7L1 (ENSCABG00000005971)	PDE5A (ENSCABG00000005946) #13	FABP2 (ENSCABG00000005943) #15	ENSCABG00000005940	USP53 (ENSCABG00000005929) #17	MYOZ2 (ENSCABG00000005928) #18	SYNPO2 (ENSCABG00000005927) #19	ENSCABG00000005925	SEC24D (ENSCABG00000005920) #20	METTL14 (ENSCABG00000005832) #21	PRSS12 (ENSCABG00000005819) #22	ENSCABG00000005796 #24
Goode s thornscrub tortoise	MODERN SPECIES	19	ANXA5 (ENSGEVG00005016203)	QRFPR (ENSGEVG00005016259) #7	ENSGEVG00005016441 #8	ENSGEVG00005016470	NDNF (ENSGEVG00005016490) #9	PRDM5 (ENSGEVG00005016679) #10	MAD2L1 (ENSGEVG00005017277) #12	RPL7L1 (ENSGEVG00005017295)	PDE5A (ENSGEVG00005017370) #13	FABP2 (ENSGEVG00005017699) #15	ENSGEVG00005017718	USP53 (ENSGEVG00005017738) #17	MYOZ2 (ENSGEVG00005017774) #18	SEC24D (ENSGEVG00005018104) #20	METTL14 (ENSGEVG00005018566) #21	PRSS12 (ENSGEVG00005018592) #22	NDST3 (ENSGEVG00005018685) #24	ENSGEVG00005018731	NDST4 (ENSGEVG00005018749) #28	UGT8 (ENSGEVG00005018777) #29	ENSGEVG00005018792	ARSJ (ENSGEVG00005018802) #30	ENSGEVG00005018824 #31	RAP1GDS1 (ENSGEVG00005018882)	TSPAN5 (ENSGEVG00005018915)	ENSGEVG00005018924	ENSGEVG00005018938	METAP1 (ENSGEVG00005018952)	ADH5 (ENSGEVG00005018979)	ADH4 (ENSGEVG00005018992)	ENSGEVG00005019090
Chinese turtle	MODERN SPECIES	232									PDE5A (ENSPSIG00000010354) #13	FABP2 (ENSPSIG00000011244) #15	USP53 (ENSPSIG00000011336) #17	MYOZ2 (ENSPSIG00000012091) #18	SYNPO2 (ENSPSIG00000006803) #19	SEC24D (ENSPSIG00000007479) #20	METTL14 (ENSPSIG00000007603) #21	PRSS12 (ENSPSIG00000009732) #22	NDST3 (ENSPSIG00000010606) #24
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000158465	ENSGT00940000153664.A.a	ENSGT00950000182805.a.a.b.b	ENSGT00390000001520	ENSGT00940000160105	ENSGT00940000159295	ENSGT00940000159264	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533
Aves	ANCESTRAL SPECIES	3	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789
Neognathae	ANCESTRAL SPECIES	5	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000160368	ENSGT00390000008853
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000160368	ENSGT00390000008853
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000160368	ENSGT00390000008853
Passeriformes_g	ANCESTRAL SPECIES	31	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000160368	ENSGT00390000008853
Passeroidea	ANCESTRAL SPECIES	33	ENSGT00950000183130.A	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000160368	ENSGT00390000008853	ENSGT00390000014545
Common canary	MODERN SPECIES	39	EXOSC9 (ENSSCAG00000002289)	ANXA5 (ENSSCAG00000002280)	QRFPR (ENSSCAG00000002273) #7	TNIP3 (ENSSCAG00000002251) #8	NDNF (ENSSCAG00000002243) #9	PRDM5 (ENSSCAG00000002231) #10	MAD2L1 (ENSSCAG00000002220) #12	RPL7L1 (ENSSCAG00000002203)	PDE5A (ENSSCAG00000002165) #13	FABP2 (ENSSCAG00000002151) #15	USP53 (ENSSCAG00000002126) #17	MYOZ2 (ENSSCAG00000002118) #18	SYNPO2 (ENSSCAG00000002112) #19	SEC24D (ENSSCAG00000001820) #20	METTL14 (ENSSCAG00000001756) #21	PRSS12 (ENSSCAG00000001746) #22	NDST4 (ENSSCAG00000001296) #28	NDST3 (ENSSCAG00000001115) #24
Zebra finch	MODERN SPECIES	25	ANXA5 (ENSTGUG00000001930)	QRFPR (ENSTGUG00000001929) #7	TNIP3 (ENSTGUG00000001928) #8	NDNF (ENSTGUG00000001927) #9	PRDM5 (ENSTGUG00000001920) #10	MAD2L1 (ENSTGUG00000001917) #12	RPL7L1 (ENSTGUG00000001916)	PDE5A (ENSTGUG00000001899) #13	FABP2 (ENSTGUG00000001896) #15	ENSTGUG00000029163	USP53 (ENSTGUG00000001892) #17	MYOZ2 (ENSTGUG00000001883) #18	SYNPO2 (ENSTGUG00000028670) #19	SEC24D (ENSTGUG00000001870) #20	METTL14 (ENSTGUG00000001867) #21	PRSS12 (ENSTGUG00000001861) #22	NDST3 (ENSTGUG00000001856) #24	ENSTGUG00000020819	NDST4 (ENSTGUG00000001847) #28	UGT8 (ENSTGUG00000001840) #29	ARSJ (ENSTGUG00000001839) #30	ENSTGUG00000001821 #31	ANK2 (ENSTGUG00000001807) #32	LARP7 (ENSTGUG00000001804) #35	ENSTGUG00000001801	NEUROG2 (ENSTGUG00000028152) #37	ALPK1 (ENSTGUG00000001800)	GC (ENSTGUG00000018912)	TIFA (ENSTGUG00000001799)	AP1AR (ENSTGUG00000001796)	CDKL2 (ENSTGUG00000001792)
Medium ground finch	MODERN SPECIES	319															METTL14 (ENSGFOG00000009676) #21	PRSS12 (ENSGFOG00000009682) #22	NDST3 (ENSGFOG00000009713) #24
Flycatcher	MODERN SPECIES	22	CCNA2 (ENSFALG00000023056)	EXOSC9 (ENSFALG00000008302)	ANXA5 (ENSFALG00000008329)	QRFPR (ENSFALG00000008351) #7	TNIP3 (ENSFALG00000008363) #8	NDNF (ENSFALG00000008372) #9	PRDM5 (ENSFALG00000008381) #10	MAD2L1 (ENSFALG00000000864) #12	ENSFALG00000024838	PDE5A (ENSFALG00000000873) #13	FABP2 (ENSFALG00000000880) #15	USP53 (ENSFALG00000000891) #17	MYOZ2 (ENSFALG00000000896) #18	SYNPO2 (ENSFALG00000000899) #19	SEC24D (ENSFALG00000000903) #20	PRSS12 (ENSFALG00000002120) #22	METTL14 (ENSFALG00000002126) #21	NDST3 (ENSFALG00000002104) #24	NDST4 (ENSFALG00000001072) #28	UGT8 (ENSFALG00000001056) #29	ARSJ (ENSFALG00000027987) #30	ENSFALG00000001045 #31	ANK2 (ENSFALG00000000997) #32	LARP7 (ENSFALG00000000972) #35	ENSFALG00000000960	ALPK1 (ENSFALG00000000956)	TIFA (ENSFALG00000026653)	AP1AR (ENSFALG00000000955)	CDKL2 (ENSFALG00000000952)	ENSFALG00000000947	BTC (ENSFALG00000000941)
Great tit	MODERN SPECIES	23	ANXA5 (ENSPMJG00000007464)	QRFPR (ENSPMJG00000007442) #7	TNIP3 (ENSPMJG00000007441) #8	NDNF (ENSPMJG00000007439) #9	PRDM5 (ENSPMJG00000007437) #10	RPL7L1 (ENSPMJG00000007415)	MAD2L1 (ENSPMJG00000007411) #12	PDE5A (ENSPMJG00000007371) #13	FABP2 (ENSPMJG00000007348) #15	ENSPMJG00000007346	USP53 (ENSPMJG00000007340) #17	MYOZ2 (ENSPMJG00000007338) #18	SYNPO2 (ENSPMJG00000007324) #19	SEC24D (ENSPMJG00000007297) #20	METTL14 (ENSPMJG00000007279) #21	PRSS12 (ENSPMJG00000007273) #22	NDST3 (ENSPMJG00000005910) #24	ENSPMJG00000005864	NDST4 (ENSPMJG00000005823) #28	UGT8 (ENSPMJG00000005820) #29	ARSJ (ENSPMJG00000005819) #30	ENSPMJG00000005770 #31	GSR (ENSPMJG00000005763)	PURG (ENSPMJG00000005762)	WRN (ENSPMJG00000005741)	SMIM18 (ENSPMJG00000005739)	GTF2E2 (ENSPMJG00000005735)	RBPMS (ENSPMJG00000005729)	DCTN6 (ENSPMJG00000005728)	GC (ENSPMJG00000005726)	BTC (ENSPMJG00000005724)
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000167533	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000160368	ENSGT00390000008853
Kakapo	MODERN SPECIES	20															METTL14 (ENSSHBG00005001638) #21	PRSS12 (ENSSHBG00005001614) #22	NDST3 (ENSSHBG00005001521) #24	NDST4 (ENSSHBG00005001437) #28	UGT8 (ENSSHBG00005000672) #29	ARSJ (ENSSHBG00005017639) #30	ENSSHBG00005017629 #31	ANK2 (ENSSHBG00005017619) #32	LARP7 (ENSSHBG00005017606) #35	ENSSHBG00005017595	NEUROG2 (ENSSHBG00005017590) #37	ALPK1 (ENSSHBG00005017586)	TIFA (ENSSHBG00005017582)	AP1AR (ENSSHBG00005017579)	CDKL2 (ENSSHBG00005017574)	RCHY1 (ENSSHBG00005017569)	PARM1 (ENSSHBG00005017562)
Golden eagle	MODERN SPECIES		ANXA5 (ENSACCG00020012937)	QRFPR (ENSACCG00020012996) #7	TNIP3 (ENSACCG00020013036) #8	NDNF (ENSACCG00020013049) #9	PRDM5 (ENSACCG00020013271) #10	MAD2L1 (ENSACCG00020013364) #12	RPL7L1 (ENSACCG00020013392)	PDE5A (ENSACCG00020013796) #13	FABP2 (ENSACCG00020013940) #15	ENSACCG00020013948	USP53 (ENSACCG00020013962) #17	MYOZ2 (ENSACCG00020013985) #18	SYNPO2 (ENSACCG00020014000) #19	SEC24D (ENSACCG00020014035) #20	METTL14 (ENSACCG00020014083) #21	PRSS12 (ENSACCG00020014119) #22	NDST3 (ENSACCG00020014156) #24	ENSACCG00020014172	NDST4 (ENSACCG00020014246) #28	UGT8 (ENSACCG00020014321) #29	ARSJ (ENSACCG00020014341) #30	ENSACCG00020014417 #31	ANK2 (ENSACCG00020014584) #32	LARP7 (ENSACCG00020014843) #35	ENSACCG00020014861	ENSACCG00020014872	NEUROG2 (ENSACCG00020014888) #37	ALPK1 (ENSACCG00020014898)	TIFA (ENSACCG00020014914)	AP1AR (ENSACCG00020014935)	CDKL2 (ENSACCG00020014976)
Galloanserae	ANCESTRAL SPECIES	5	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000154518.a	ENSGT00940000156946
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000154518.a	ENSGT00940000156946
Japanese quail	MODERN SPECIES	22	QRFPR (ENSCJPG00005003635) #7	TNIP3 (ENSCJPG00005003643) #8	NDNF (ENSCJPG00005003647) #9	PRDM5 (ENSCJPG00005003653) #10	MAD2L1 (ENSCJPG00005003676) #12	RPL7L1 (ENSCJPG00005003680)	PDE5A (ENSCJPG00005003687) #13	USP53 (ENSCJPG00005003725) #17	FABP2 (ENSCJPG00005003730) #15	ENSCJPG00005003731	ENSCJPG00005003732	MYOZ2 (ENSCJPG00005003734) #18	SYNPO2 (ENSCJPG00005003736) #19	ENSCJPG00005003737	METTL14 (ENSCJPG00005003753) #21	PRSS12 (ENSCJPG00005003756) #22	NDST3 (ENSCJPG00005003762) #24	NDST4 (ENSCJPG00005003779) #28	UGT8 (ENSCJPG00005003794) #29	ARSJ (ENSCJPG00005003806) #30	ENSCJPG00005003811 #31	ANK2 (ENSCJPG00005003829) #32	LARP7 (ENSCJPG00005006784) #35	ENSCJPG00005006789	NEUROG2 (ENSCJPG00005006790) #37	ALPK1 (ENSCJPG00005006791)	TIFA (ENSCJPG00005006794)	AP1AR (ENSCJPG00005006795)	FAM241A (ENSCJPG00005006796)	ENSCJPG00005006843	ENPEP (ENSCJPG00005006861)
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000154518.a	ENSGT00940000156946
Chicken	MODERN SPECIES	33	ANXA5 (ENSGALG00010005260)	QRFPR (ENSGALG00010005300) #7	TNIP3 (ENSGALG00010005357) #8	NDNF (ENSGALG00010005399) #9	PRDM5 (ENSGALG00010005434) #10	MAD2L1 (ENSGALG00010005435) #12	RPL7L1 (ENSGALG00010005456)	PDE5A (ENSGALG00010005499) #13	FABP2 (ENSGALG00010005505) #15	ENSGALG00010005572	USP53 (ENSGALG00010005507) #17	MYOZ2 (ENSGALG00010005510) #18	SYNPO2 (ENSGALG00010005522) #19	SEC24D (ENSGALG00010005543) #20	METTL14 (ENSGALG00010005551) #21	PRSS12 (ENSGALG00010005555) #22	NDST3 (ENSGALG00010005567) #24	NDST4 (ENSGALG00010003898) #28	UGT8 (ENSGALG00010003761) #29	ARSJ (ENSGALG00010003768) #30	CAMK2D (ENSGALG00010003914) #31	ANK2 (ENSGALG00010003978) #32	LARP7 (ENSGALG00010004001) #35	ENSGALG00010004007	NEUROG2 (ENSGALG00010005569) #37	ALPK1 (ENSGALG00010004039)	TIFA (ENSGALG00010004065)	AP1AR (ENSGALG00010004079)	FAM241A (ENSGALG00010004082)	PITX2 (ENSGALG00010003740)	ENPEP (ENSGALG00010003726)
Turkey	MODERN SPECIES	24	EXOSC9 (ENSMGAG00000010649)	ANXA5 (ENSMGAG00000010665)	QRFPR (ENSMGAG00000010688) #7	TNIP3 (ENSMGAG00000010701) #8	NDNF (ENSMGAG00000010709) #9	PRDM5 (ENSMGAG00000010710) #10	MAD2L1 (ENSMGAG00000010720) #12	ENSMGAG00000010724	PDE5A (ENSMGAG00000010728) #13	FABP2 (ENSMGAG00000010754) #15	USP53 (ENSMGAG00000010759) #17	MYOZ2 (ENSMGAG00000010771) #18	SYNPO2 (ENSMGAG00000010819) #19	SEC24D (ENSMGAG00000010783) #20	METTL14 (ENSMGAG00000010804) #21	PRSS12 (ENSMGAG00000010824) #22	NDST3 (ENSMGAG00000010843) #24	NDST4 (ENSMGAG00000010849) #28	UGT8 (ENSMGAG00000010859) #29	ARSJ (ENSMGAG00000010871) #30	ENSMGAG00000010872 #31	ENSMGAG00000010896 #32	ENSMGAG00000017256 #32	LARP7 (ENSMGAG00000010947) #35	ENSMGAG00000010968	ALPK1 (ENSMGAG00000010978)	TIFA (ENSMGAG00000015729)	AP1AR (ENSMGAG00000010986)	ENSMGAG00000021684	ENPEP (ENSMGAG00000010993)	ELOVL6 (ENSMGAG00000019199)
Anatidae	ANCESTRAL SPECIES	46								ENSGT00940000156633	ENSGT00940000155680.d	ENSGT00940000158223	ENSGT00940000160897	ENSGT01030000234574.B.c.a.g	ENSGT01030000234574.B.c.a.h	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155150.a	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789
Duck	DUPLICATION
Duck	MODERN SPECIES	22	GSTCD (ENSAPLG00000016467)	INTS12 (ENSAPLG00000010592)	ARHGEF38 (ENSAPLG00000010561)	PPA2 (ENSAPLG00000010174)	TET2 (ENSAPLG00000008329)	CXXC4 (ENSAPLG00000027306)	TACR3 (ENSAPLG00000008661)	PPM1K (ENSAPLG00000001192)	WDFY3 (ENSAPLG00000016174)	CDS1 (ENSAPLG00000003109)	NKX6-1 (ENSAPLG00000029273)	ENSAPLG00000002847	ENSAPLG00000002829	SEC24D (ENSAPLG00000002436) #20	METTL14 (ENSAPLG00000002025) #21	ENSAPLG00000001152 #22	ENSAPLG00000026152 #22	NDST3 (ENSAPLG00000014790) #24	ENSAPLG00000030254	NDST4 (ENSAPLG00000008309) #28	UGT8 (ENSAPLG00000008294) #29	ARSJ (ENSAPLG00000008292) #30	ENSAPLG00000022710 #31	ENSAPLG00000029591 #31	ANK2 (ENSAPLG00000010858) #32	LARP7 (ENSAPLG00000012887) #35	ENSAPLG00000013183	NEUROG2 (ENSAPLG00000029891) #37	ALPK1 (ENSAPLG00000013490)	TIFA (ENSAPLG00000025691)	AP1AR (ENSAPLG00000013936)
Duck	MODERN SPECIES	22	INTS12 (ENSAPLG00000010592)	ARHGEF38 (ENSAPLG00000010561)	PPA2 (ENSAPLG00000010174)	TET2 (ENSAPLG00000008329)	CXXC4 (ENSAPLG00000027306)	TACR3 (ENSAPLG00000008661)	PPM1K (ENSAPLG00000001192)	WDFY3 (ENSAPLG00000016174)	CDS1 (ENSAPLG00000003109)	NKX6-1 (ENSAPLG00000029273)	ENSAPLG00000002847	ENSAPLG00000002829	SEC24D (ENSAPLG00000002436) #20	METTL14 (ENSAPLG00000002025) #21	ENSAPLG00000001152 #22	ENSAPLG00000026152 #22	NDST3 (ENSAPLG00000014790) #24	ENSAPLG00000030254	NDST4 (ENSAPLG00000008309) #28	UGT8 (ENSAPLG00000008294) #29	ARSJ (ENSAPLG00000008292) #30	ENSAPLG00000022710 #31	ENSAPLG00000029591 #31	ANK2 (ENSAPLG00000010858) #32	LARP7 (ENSAPLG00000012887) #35	ENSAPLG00000013183	NEUROG2 (ENSAPLG00000029891) #37	ALPK1 (ENSAPLG00000013490)	TIFA (ENSAPLG00000025691)	AP1AR (ENSAPLG00000013936)	FAM241A (ENSAPLG00000014046)
Pink-footed goose	MODERN SPECIES	214								PPM1K (ENSABRG00000007861)	WDFY3 (ENSABRG00000007341)	CDS1 (ENSABRG00000006896)	ENSABRG00000006869	ENSABRG00000006847	ENSABRG00000006721	SEC24D (ENSABRG00000001852) #20	METTL14 (ENSABRG00000000762) #21	PRSS12 (ENSABRG00000000682) #22	NDST3 (ENSABRG00000023146) #24
African ostrich	MODERN SPECIES	604	QRFPR (ENSSCUG00000009323) #7	TNIP3 (ENSSCUG00000009329) #8	NDNF (ENSSCUG00000009334) #9	PRDM5 (ENSSCUG00000009336) #10	MAD2L1 (ENSSCUG00000009345) #12	RPL7L1 (ENSSCUG00000009348)	PDE5A (ENSSCUG00000009353) #13	FABP2 (ENSSCUG00000009355) #15	USP53 (ENSSCUG00000009359) #17	MYOZ2 (ENSSCUG00000009361) #18	ENSSCUG00000009363 ##19	SYNPO2 (ENSSCUG00000009365) #19	SEC24D (ENSSCUG00000009366) #20	METTL14 (ENSSCUG00000009369) #21	ENSSCUG00000009370	PRSS12 (ENSSCUG00000009374) #22	NDST3 (ENSSCUG00000009378) #24
Australian saltwater crocodile	MODERN SPECIES	32	FAT4 (ENSCPRG00005004736)	INTU (ENSCPRG00005004747)	QRFPR (ENSCPRG00005004766) #7	ENSCPRG00005004795 #8	NDNF (ENSCPRG00005004799) #9	PRDM5 (ENSCPRG00005004805) #10	MAD2L1 (ENSCPRG00005004810) #12	RPL7L1 (ENSCPRG00005004817)	PDE5A (ENSCPRG00005004828) #13	FABP2 (ENSCPRG00005004836) #15	USP53 (ENSCPRG00005004843) #17	MYOZ2 (ENSCPRG00005004848) #18	SYNPO2 (ENSCPRG00005004859) #19	SEC24D (ENSCPRG00005004870) #20	METTL14 (ENSCPRG00005004897) #21	PRSS12 (ENSCPRG00005004901) #22	NDST3 (ENSCPRG00005004913) #24	PFN1 (ENSCPRG00005004928)	NDST4 (ENSCPRG00005004945) #28	ENSCPRG00005005050	UGT8 (ENSCPRG00005005054) #29	ARSJ (ENSCPRG00005005061) #30	ENSCPRG00005005068 #31	ANK2 (ENSCPRG00005005086) #32	LARP7 (ENSCPRG00005005168) #35	ENSCPRG00005005192	ALPK1 (ENSCPRG00005005236)	TIFA (ENSCPRG00005005271)	ENSCPRG00005005274	FAM241A (ENSCPRG00005005278)	PITX1 (ENSCPRG00005005301)
Lepidosauria	ANCESTRAL SPECIES	9	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789	ENSGT00940000156946
Episquamata	ANCESTRAL SPECIES	3	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00390000007235	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789	ENSGT00940000156946	ENSGT01050000244965.b
Laterata	ANCESTRAL SPECIES	9	ENSGT00940000155988	ENSGT01070000253744.a.b #7	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00390000007235	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000162789	ENSGT00940000156946
Common wall lizard	MODERN SPECIES	17	PRDM5 (ENSPMRG00000009710) #10	ENSPMRG00000009743	ENSPMRG00000009755	REC114 (ENSPMRG00000009771)	MAD2L1 (ENSPMRG00000009784) #12	RPL7L1 (ENSPMRG00000009797)	ENSPMRG00000009839 #13	ENSPMRG00000009955	ENSPMRG00000009959	USP53 (ENSPMRG00000009970) #17	MYOZ2 (ENSPMRG00000009978) #18	SYNPO2 (ENSPMRG00000009987) #19	SEC24D (ENSPMRG00000010010) #20	METTL14 (ENSPMRG00000010028) #21	ENSPMRG00000010033	PRSS12 (ENSPMRG00000010040) #22	NDST3 (ENSPMRG00000010056) #24	ENSPMRG00000010063	ENSPMRG00000010065	NDST4 (ENSPMRG00000010068) #28	ENSPMRG00000010076 #29	ENSPMRG00000010085 #29	ARSJ (ENSPMRG00000007775) #30	ENSPMRG00000007784 #31	ANK2 (ENSPMRG00000008051) #32	ENSPMRG00000009801	LARP7 (ENSPMRG00000009807) #35	ENSPMRG00000009831	NEUROG2 (ENSPMRG00000009854) #37	ALPK1 (ENSPMRG00000009864)	ENSPMRG00000009876
Argentine black and white tegu	MODERN SPECIES	11	QRFPR (ENSSMRG00000015416) #7	TNIP3 (ENSSMRG00000015415) #8	NDNF (ENSSMRG00000015414) #9	PRDM5 (ENSSMRG00000015412) #10	ENSSMRG00000015411	REC114 (ENSSMRG00000015410)	MAD2L1 (ENSSMRG00000015409) #12	RPL7L1 (ENSSMRG00000015408)	PDE5A (ENSSMRG00000015407) #13	FABP2 (ENSSMRG00000015406) #15	USP53 (ENSSMRG00000015405) #17	MYOZ2 (ENSSMRG00000015404) #18	SYNPO2 (ENSSMRG00000015403) #19	SEC24D (ENSSMRG00000015401) #20	METTL14 (ENSSMRG00000015400) #21	PRSS12 (ENSSMRG00000015399) #22	NDST3 (ENSSMRG00000015397) #24	ENSSMRG00000015396	NDST4 (ENSSMRG00000015395) #28	UGT8 (ENSSMRG00000015393) #29	ENSSMRG00000015392	ARSJ (ENSSMRG00000015389) #30	ENSSMRG00000015388 #31	ANK2 (ENSSMRG00000015387) #32	LARP7 (ENSSMRG00000014711) #35	ENSSMRG00000014702	NEUROG2 (ENSSMRG00000014699) #37	ALPK1 (ENSSMRG00000014696)	TIFA (ENSSMRG00000014694)	AP1AR (ENSSMRG00000014692)	FAM241A (ENSSMRG00000014689)
Toxicofera	ANCESTRAL SPECIES	12	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00390000007235	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000162895 #37	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000154340.A	ENSGT00940000156946	ENSGT01050000244965.b
Elapidae	ANCESTRAL SPECIES	11	ENSGT01070000253744.a.b #7	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00390000007235	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157146.b	ENSGT00390000012030.b.b	ENSGT00940000158380	ENSGT00950000183079.A.b.c.a	ENSGT00940000153716.B	ENSGT00390000000080.a.a	ENSGT00950000183012.B.b	ENSGT00940000155777	ENSGT00940000160440	ENSGT00390000017153.a	ENSGT00950000183026.A.a.a	ENSGT00940000177791	ENSGT01030000235147	ENSGT00940000160647	ENSGT00390000006641
Indian cobra	MODERN SPECIES	3	ANXA5 (ENSNNAG00000005796)	QRFPR (ENSNNAG00000005833) #7	NDNF (ENSNNAG00000005872) #9	PRDM5 (ENSNNAG00000005909) #10	REC114 (ENSNNAG00000005964)	MAD2L1 (ENSNNAG00000005989) #12	RPL7L1 (ENSNNAG00000006031)	PDE5A (ENSNNAG00000006237) #13	USP53 (ENSNNAG00000006359) #17	FABP2 (ENSNNAG00000006465) #15	ENSNNAG00000006473	MYOZ2 (ENSNNAG00000006481) #18	SYNPO2 (ENSNNAG00000006499) #19	SEC24D (ENSNNAG00000006527) #20	METTL14 (ENSNNAG00000006582) #21	PRSS12 (ENSNNAG00000006616) #22	SGCZ (ENSNNAG00000006675)	TUSC3 (ENSNNAG00000006748)	FGF20 (ENSNNAG00000006767)	MICU3 (ENSNNAG00000006799)	ZDHHC2 (ENSNNAG00000006846)	CNOT7 (ENSNNAG00000006878)	VPS37A (ENSNNAG00000006919)	MTMR7 (ENSNNAG00000006947)	SLC7A2 (ENSNNAG00000007018)	PDGFRL (ENSNNAG00000007068)	MTUS1 (ENSNNAG00000007092)	ENSNNAG00000007188	FGL1 (ENSNNAG00000007206)	PCM1 (ENSNNAG00000007250)	ASAH1 (ENSNNAG00000007789)
Elapidae_a	ANCESTRAL SPECIES	13	ENSGT01070000253744.a.b #7	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00390000007235	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157146.b	ENSGT00390000012030.b.b	ENSGT00940000158380	ENSGT00950000183079.A.b.c.a	ENSGT00940000153716.B	ENSGT00390000000080.a.a	ENSGT00950000183012.B.b	ENSGT00940000155777	ENSGT00940000160440	ENSGT00390000017153.a	ENSGT00950000183026.A.a.a	ENSGT00940000177791	ENSGT01030000235147	ENSGT00940000160647	ENSGT00390000006641
Acanthophiinae	ANCESTRAL SPECIES	4	ENSGT01070000253744.a.b #7	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00390000007235	ENSGT00940000153395.a #12	ENSGT00950000182878.b.b	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT01030000235417	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00960000191080	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157146.b	ENSGT00390000012030.b.b	ENSGT00940000158380	ENSGT00950000183079.A.b.c.a	ENSGT00940000153716.B	ENSGT00390000000080.a.a	ENSGT00950000183012.B.b	ENSGT00940000155777	ENSGT00940000160440	ENSGT00390000017153.a	ENSGT00950000183026.A.a.a	ENSGT00940000177791	ENSGT01030000235147	ENSGT00940000160647	ENSGT00390000006641
Mainland tiger snake	MODERN SPECIES	18	ANXA5 (ENSNSUG00000008850)	QRFPR (ENSNSUG00000008851) #7	NDNF (ENSNSUG00000008852) #9	ENSNSUG00000008854	MAD2L1 (ENSNSUG00000008855) #12	RPL7L1 (ENSNSUG00000008856)	PDE5A (ENSNSUG00000008857) #13	FABP2 (ENSNSUG00000008860) #15	ENSNSUG00000008861	USP53 (ENSNSUG00000008862) #17	MYOZ2 (ENSNSUG00000008863) #18	SYNPO2 (ENSNSUG00000008864) #19	ENSNSUG00000008865	SEC24D (ENSNSUG00000008866) #20	METTL14 (ENSNSUG00000009171) #21	PRSS12 (ENSNSUG00000009172) #22	SGCZ (ENSNSUG00000009177)	TUSC3 (ENSNSUG00000009180)	FGF20 (ENSNSUG00000009195)	MICU3 (ENSNSUG00000009196)	ZDHHC2 (ENSNSUG00000009210)	CNOT7 (ENSNSUG00000009211)	VPS37A (ENSNSUG00000009212)	MTMR7 (ENSNSUG00000009213)	SLC7A2 (ENSNSUG00000009229)	PDGFRL (ENSNSUG00000009230)	ENSNSUG00000009231	ENSNSUG00000009232	ENSNSUG00000009233	FGL1 (ENSNSUG00000009234)	PCM1 (ENSNSUG00000009256)
Eastern brown snake	MODERN SPECIES	9	ANXA5 (ENSPTXG00000008750)	QRFPR (ENSPTXG00000008687) #7	NDNF (ENSPTXG00000003994) #9	PRDM5 (ENSPTXG00000003993) #10	REC114 (ENSPTXG00000003990)	MAD2L1 (ENSPTXG00000003986) #12	RPL7L1 (ENSPTXG00000003981)	PDE5A (ENSPTXG00000003978) #13	FABP2 (ENSPTXG00000003975) #15	ENSPTXG00000003974	USP53 (ENSPTXG00000003973) #17	MYOZ2 (ENSPTXG00000003972) #18	SYNPO2 (ENSPTXG00000003971) #19	SEC24D (ENSPTXG00000003970) #20	METTL14 (ENSPTXG00000003969) #21	PRSS12 (ENSPTXG00000003966) #22	SGCZ (ENSPTXG00000003964)	TUSC3 (ENSPTXG00000003960)	FGF20 (ENSPTXG00000003957)	MICU3 (ENSPTXG00000003955)	ZDHHC2 (ENSPTXG00000003950)	CNOT7 (ENSPTXG00000003947)	VPS37A (ENSPTXG00000003945)	MTMR7 (ENSPTXG00000003920)	SLC7A2 (ENSPTXG00000003908)	MTUS1 (ENSPTXG00000003906)	FGL1 (ENSPTXG00000003905)	PCM1 (ENSPTXG00000003879)	ASAH1 (ENSPTXG00000003866)	ENSPTXG00000003862	ENSPTXG00000003860
Blue-lipped sea krait	MODERN SPECIES	3488																PRSS12 (ENSLLTG00000006051) #22
Lizard	MODERN SPECIES	4	TNIP3 (ENSACAG00000012990) #8	NDNF (ENSACAG00000012994) #9	PRDM5 (ENSACAG00000012999) #10	ENSACAG00000013160	MAD2L1 (ENSACAG00000013167) #12	RPL7L1 (ENSACAG00000044289)	PDE5A (ENSACAG00000013216) #13	FABP2 (ENSACAG00000013353) #15	ENSACAG00000037542	USP53 (ENSACAG00000013366) #17	MYOZ2 (ENSACAG00000013422) #18	SYNPO2 (ENSACAG00000013437) #19	SEC24D (ENSACAG00000013448) #20	ENSACAG00000041851	METTL14 (ENSACAG00000013631) #21	PRSS12 (ENSACAG00000013699) #22	ENSACAG00000040623	ENSACAG00000045140	NDST3 (ENSACAG00000013822) #24	NDST4 (ENSACAG00000012117) #28	UGT8 (ENSACAG00000011866) #29	ENSACAG00000011862 #30	ENSACAG00000011476 #31	ENSACAG00000035530	ENSACAG00000041014	ANK2 (ENSACAG00000010704) #32	ENSACAG00000041599	ENSACAG00000044520	ENSACAG00000042033	LARP7 (ENSACAG00000010662) #35	ENSACAG00000010636
tuatara	MODERN SPECIES	501						PDE5A (ENSSPUG00000008563) #13	FABP2 (ENSSPUG00000008584) #15	ENSSPUG00000008599 #17	ENSSPUG00000008605 #17	ENSSPUG00000008608 #17	ENSSPUG00000008612 #17	MYOZ2 (ENSSPUG00000008631) #18	SYNPO2 (ENSSPUG00000008670) #19	SEC24D (ENSSPUG00000008685) #20	METTL14 (ENSSPUG00000008722) #21	PRSS12 (ENSSPUG00000008747) #22
Anura	ANCESTRAL SPECIES	56	ENSGT00950000183130.A	ENSGT01010000222815	ENSGT00940000155988	ENSGT00510000046908.a.a.b #8	ENSGT00390000007586.a.b #9	ENSGT00940000158340 #10	ENSGT00940000153395.a #12	ENSGT00940000155475 #13	ENSGT00800000124172 #15	ENSGT00990000210463	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000160665 #24	ENSGT00940000157168.e #28	ENSGT01000000219065	ENSGT00940000156545 #29	ENSGT00940000159954 #30	ENSGT00940000159769.b #31	ENSGT00940000155279.C #32	ENSGT00940000154949.b #35	ENSGT00940000162335	ENSGT00940000159753	ENSGT00940000154589.b	ENSGT00390000002219	ENSGT00940000155140
Leishan spiny toad	MODERN SPECIES		PRDM5 (ENSLLEG00000000649) #10	MAD2L1 (ENSLLEG00000000742) #12	ENSLLEG00000000762	PDE5A (ENSLLEG00000000792) #13	FABP2 (ENSLLEG00000001006) #15	ENSLLEG00000001026	USP53 (ENSLLEG00000001057) #17	MYOZ2 (ENSLLEG00000001150) #18	SYNPO2 (ENSLLEG00000001171) #19	ENSLLEG00000001189	ENSLLEG00000001201 #20	ENSLLEG00000001216 #20	METTL14 (ENSLLEG00000001282) #21	ENSLLEG00000001401	ENSLLEG00000001416	PRSS12 (ENSLLEG00000001437) #22	NDST3 (ENSLLEG00000001511) #24	ENSLLEG00000001651	ENSLLEG00000001659	ENSLLEG00000001671	NDST4 (ENSLLEG00000001693) #28	ENSLLEG00000001748	UGT8 (ENSLLEG00000001805) #29	ENSLLEG00000001825	ENSLLEG00000001839	ENSLLEG00000001853	ARSJ (ENSLLEG00000001861) #30	ENSLLEG00000002003 #31	ANK2 (ENSLLEG00000002793) #32	ENSLLEG00000003771	ENSLLEG00000003777
Frog	MODERN SPECIES		qrfpr (ENSXETG00000002104) #7	tnip3 (ENSXETG00000043582) #8	ndnf (ENSXETG00000002103) #9	prdm5 (ENSXETG00000002101) #10	mad2l1 (ENSXETG00000002100)	pde5a (ENSXETG00000004046) #13	fabp2 (ENSXETG00000004045) #15	usp53 (ENSXETG00000004044) #17	myoz2 (ENSXETG00000004043) #18	SYNPO2 (ENSXETG00000047286) #19	ENSXETG00000044533 ##19	sec24d (ENSXETG00000004039) #20	mettl14 (ENSXETG00000004037) #21	ctu1 (ENSXETG00000004036)	ENSXETG00000042908	prss12 (ENSXETG00000004035) #22	ndst3 (ENSXETG00000004033) #28	ndst4 (ENSXETG00000010566) #28	ENSXETG00000038768	ugt8 (ENSXETG00000010570) #29	arsj (ENSXETG00000015525) #30	camk2d (ENSXETG00000015547) #31	ank2 (ENSXETG00000015555) #32	ENSXETG00000046684	larp7 (ENSXETG00000024097) #35	zgrf1 (ENSXETG00000031767)	neurog2 (ENSXETG00000046744)	alpk1 (ENSXETG00000024103)	tifa (ENSXETG00000024109)	ENSXETG00000042703	ap1ar (ENSXETG00000025645)
Coelacanth	MODERN SPECIES	2061															ENSLACG00000009676	PRSS12 (ENSLACG00000007907) #22	ENSLACG00000004348 #28
Actinopterygii	ANCESTRAL SPECIES	15	ENSGT00390000017284.b	ENSGT01030000234583.a.b.b.f	ENSGT00940000162335	ENSGT00940000154949.b #35	ENSGT00940000155279.C #32	ENSGT00940000155150.a	ENSGT00940000159954 #30	ENSGT00940000153395.a #12	ENSGT00940000155475.h #13	ENSGT00990000210463	ENSGT00940000156337 #17	ENSGT00950000183027.b #18	ENSGT00950000183054.a.a.a #19	ENSGT00950000182924.A.b.a.b #20	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000160623	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000013749	ENSGT00770000121728	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697
Neopterygii	ANCESTRAL SPECIES	2	ENSGT00940000154372.a.a	ENSGT00530000063586.b	ENSGT00390000010628	ENSGT00390000005639.a.a	ENSGT00390000000470	ENSGT00850000132319.a.a.b	ENSGT00530000063255.B	ENSGT00390000006192	ENSGT00390000013015	ENSGT00530000063669.a	ENSGT00390000001577	ENSGT00940000154965.B	ENSGT00940000162414	ENSGT00940000158402	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000160623	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000013749	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00940000156495
Osteoglossocephalai	ANCESTRAL SPECIES	109	ENSGT00940000154372.a.a.a	ENSGT00530000063586.b.c.b	ENSGT00390000010628.b	ENSGT00390000005639.a.a	ENSGT00390000000470	ENSGT00850000132319.a.a.b	ENSGT00530000063255.B	ENSGT00390000006192	ENSGT00390000013015	ENSGT00530000063669.a	ENSGT00390000001577	ENSGT00940000154965.B	ENSGT00940000162414	ENSGT00940000158402	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000013749	ENSGT01030000234803	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00940000156495
Clupeocephala	ANCESTRAL SPECIES	353															ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000013749	ENSGT01030000234803	ENSGT00940000159346	ENSGT00390000004179
Otomorpha	ANCESTRAL SPECIES	409															ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000004179	ENSGT00940000159346	ENSGT01040000240855	ENSGT00390000013749
Otophysi	ANCESTRAL SPECIES	242									ENSGT00390000009391.a	ENSGT00940000160246.d	ENSGT00940000165381	ENSGT00940000158826	ENSGT00390000000002.a.a.a.nb.b	ENSGT00940000157352.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00940000160268	ENSGT00390000006192	ENSGT00390000004179	ENSGT00940000159346	ENSGT01040000240855	ENSGT00390000013749	ENSGT00390000018004	ENSGT00530000063425.a.a.a.b
Characiphysae	ANCESTRAL SPECIES	163									ENSGT00390000009391.a	ENSGT00940000160246.d	ENSGT00940000165381	ENSGT00940000158826	ENSGT00390000000002.a.a.a.nb.b	ENSGT00940000157352.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00940000156418	ENSGT00390000012736	ENSGT00940000160268	ENSGT00390000006192	ENSGT00390000004179	ENSGT00940000159346	ENSGT01040000240855	ENSGT00390000013749
Channel catfish	MODERN SPECIES	21	ENSIPUG00000002206	ENSIPUG00000002219	ENSIPUG00000002247	ENSIPUG00000002258	ENSIPUG00000002275	ENSIPUG00000002284	fnip2 (ENSIPUG00000002304)	ENSIPUG00000002397	ENSIPUG00000002410	ENSIPUG00000002428	APBB2 (ENSIPUG00000002447)	UBA6 (ENSIPUG00000002471)	grhprb (ENSIPUG00000002516)	ZBTB5 (ENSIPUG00000002531)	mettl14 (ENSIPUG00000002539) #21	prss12 (ENSIPUG00000002571) #22	NDST4 (ENSIPUG00000002589) #28	UGT8 (ENSIPUG00000002626) #29	spock3 (ENSIPUG00000002644)	tll1 (ENSIPUG00000002661)	cpe (ENSIPUG00000002712)	msmo1 (ENSIPUG00000002734)	klhl2 (ENSIPUG00000002741)	ENSIPUG00000002776	npy1r (ENSIPUG00000002891)	med28 (ENSIPUG00000002898)	tma16 (ENSIPUG00000002917)	march1 (ENSIPUG00000002942)	ENSIPUG00000002970	apela (ENSIPUG00000002977)	tmem192 (ENSIPUG00000002986)
Characiphysae_b	ANCESTRAL SPECIES	188									ENSGT00390000009391.a	ENSGT00940000160246.d	ENSGT00940000165381	ENSGT00940000158826	ENSGT00390000000002.a.a.a.nb.b	ENSGT00940000157352.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00940000156418	ENSGT00390000012736	ENSGT00940000160268	ENSGT00390000006192
Characoidei	ANCESTRAL SPECIES	233											ENSGT00390000009391.a	ENSGT00940000160246.d	ENSGT00940000165381	ENSGT00940000158826.f	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00940000156418	ENSGT00390000012736	ENSGT00940000160268	ENSGT00390000006192	ENSGT00940000159346	ENSGT00390000004179
Red-bellied piranha	MODERN SPECIES	640										fnip2 (ENSPNAG00000009561)	ZBTB5 (ENSPNAG00000009577)	grhprb (ENSPNAG00000009613)	UBA6 (ENSPNAG00000009639)	APBB2 (ENSPNAG00000009758)	mettl14 (ENSPNAG00000009807) #21	PRSS12 (ENSPNAG00000009849) #22
Mexicana tetra	MODERN SPECIES	13	ENSAMXG00000035254	smox (ENSAMXG00000004855)	ENSAMXG00000038836	ENSAMXG00000025549	ENSAMXG00000039503	ENSAMXG00000035261	ENSAMXG00000043772	ENSAMXG00000042821	ENSAMXG00000029932	ENSAMXG00000037149	ENSAMXG00000032330	ENSAMXG00000038878	lad1 (ENSAMXG00000000233)	ENSAMXG00000034141	mettl14 (ENSAMXG00000039626) #21	PRSS12 (ENSAMXG00000029742) #22	NDST4 (ENSAMXG00000037801) #28	ENSAMXG00000029228	ENSAMXG00000043675	ENSAMXG00000040656	ugt8 (ENSAMXG00000039733) #29	spock3 (ENSAMXG00000000354)	tll1 (ENSAMXG00000039193)	cpe (ENSAMXG00000033974)	msmo1 (ENSAMXG00000040310)	KLHL2 (ENSAMXG00000037606)	ENSAMXG00000036858	ENSAMXG00000034701	ENSAMXG00000044002	ENSAMXG00000041797	primpol (ENSAMXG00000035771)
Electric eel	MODERN SPECIES	503								fnip2 (ENSEEEG00000021769)	ENSEEEG00000021771	ENSEEEG00000021772	grhprb (ENSEEEG00000021776)	UBA6 (ENSEEEG00000021839)	APBB2 (ENSEEEG00000022031)	ENSEEEG00000022033	mettl14 (ENSEEEG00000022039) #21	ENSEEEG00000022041 #22	ENSEEEG00000022043 #28	ugt8 (ENSEEEG00000022121) #29	ENSEEEG00000022122
Cyprinoidei	ANCESTRAL SPECIES	55	ENSGT00550000074857	ENSGT00940000153612.A	ENSGT00530000063425.a.a.a.b	ENSGT00390000018004	ENSGT00390000013749	ENSGT01040000240855	ENSGT00940000159346	ENSGT00390000004179	ENSGT00390000009391.a	ENSGT00940000160246.d	ENSGT00940000165381	ENSGT00940000158826	ENSGT00390000000002.a.a.a.nb.b	ENSGT00940000157352.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225.a	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00940000160268	ENSGT00390000006192
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	15	ENSGT00530000063425.a.a.a.b.rd.b	ENSGT00390000018004	ENSGT00390000013749.a	ENSGT01040000240855.a.b	ENSGT00390000013749.b	ENSGT01040000240855.a.a	ENSGT00940000159346.b	ENSGT00390000004179.a	ENSGT00390000009391.a.f	ENSGT00940000160246.d.b	ENSGT00940000165381.b	ENSGT00940000158826.h	ENSGT00390000000002.a.a.a.nb.b.a	ENSGT00940000157352.a	ENSGT00550000075003.b #21	ENSGT00940000158131.g #22	ENSGT00940000157168.j #28	ENSGT00940000156545.a #29	ENSGT00940000157828.w	ENSGT00940000157225.a.a	ENSGT00940000157158.e	ENSGT00940000158012.z	ENSGT00940000156434.c	ENSGT00940000156418.x.a	ENSGT00940000160268.f	ENSGT00390000006192.dc.a	ENSGT00390000012574.k	ENSGT00940000156950.b.a	ENSGT00940000156344.a.b	ENSGT00940000156950.b.b	ENSGT00940000156344.a.a
Cyprininae_a	ANCESTRAL SPECIES	48	ENSGT00550000074857.`b	ENSGT00940000153612.A.e	ENSGT00530000063425.a.a.a.b.rd.b	ENSGT00390000018004	ENSGT00390000013749.b	ENSGT01040000240855.a.a	ENSGT00940000159346.b	ENSGT00390000004179.a	ENSGT00390000009391.a.f	ENSGT00940000160246.d.b	ENSGT00940000165381.b	ENSGT00940000158826.h	ENSGT00390000000002.a.a.a.nb.b.a	ENSGT00940000157352.a	ENSGT00550000075003.b #21	ENSGT00940000158131.g #22	ENSGT00940000157168.j #28	ENSGT00940000156545.a #29	ENSGT00940000157828.w	ENSGT00940000157225.a.a	ENSGT00940000157158.e	ENSGT00940000158012.z	ENSGT00940000156434.c	ENSGT00940000156418.x.a	ENSGT00940000160268.f	ENSGT00390000006192.dc.a	ENSGT00390000012574.k.b	ENSGT00940000156950.b.a	ENSGT00940000156344.a.b	ENSGT00590000083165	ENSGT00940000153566.b.a
Golden-line barbel	MODERN SPECIES	426	smc2 (ENSSGRG00000007136)	ecpas (ENSSGRG00000003022)	FBXO10 (ENSSGRG00000002838)	polr1e (ENSSGRG00000002830)	tmem192 (ENSSGRG00000002827)	apela (ENSSGRG00000002826)	ENSSGRG00000002824	tma16 (ENSSGRG00000002819)	fnip2 (ENSSGRG00000002815)	ZBTB5 (ENSSGRG00000002814)	ENSSGRG00000002813	UBA6 (ENSSGRG00000001372)	ENSSGRG00000043276	ENSSGRG00000043275	mettl14 (ENSSGRG00000043274) #21	PRSS12 (ENSSGRG00000043271) #22	NDST4 (ENSSGRG00000043115) #28
Common carp reference	MODERN SPECIES	27	exoc1l (ENSCCRG00000062145)	smc2 (ENSCCRG00000037286)	ecpas (ENSCCRG00000035863)	ENSCCRG00000035755	tmem192 (ENSCCRG00000035750)	apela (ENSCCRG00000065720)	ENSCCRG00000035749	tma16 (ENSCCRG00000078941)	fnip2 (ENSCCRG00000057646)	ENSCCRG00000015175	grhprb (ENSCCRG00000082325)	ENSCCRG00000053703	ENSCCRG00000081712	ENSCCRG00000015325	mettl14 (ENSCCRG00000005110) #21	ENSCCRG00000074573 #22	ENSCCRG00000022430 #28	ENSCCRG00000070713	tll1 (ENSCCRG00000026462)	cpe (ENSCCRG00000053277)	msmo1 (ENSCCRG00000026080)	KLHL2 (ENSCCRG00000066175)	ENSCCRG00000009109	npy1r (ENSCCRG00000019698)	med28 (ENSCCRG00000019706)	tmem144a (ENSCCRG00000068594)	gria2a (ENSCCRG00000022287)	glrba (ENSCCRG00000080907)	ncapd3 (ENSCCRG00000024703)	primpol (ENSCCRG00000029416)	ENSCCRG00000029421
Goldfish	MODERN SPECIES	18	clrn2 (ENSCARG00000027603)	exoc1l (ENSCARG00000027613)	smc2 (ENSCARG00000027652)	ecpas (ENSCARG00000027963)	tmem192 (ENSCARG00000028848)	apela (ENSCARG00000028896)	ENSCARG00000028914	tma16 (ENSCARG00000028943)	fnip2 (ENSCARG00000029006)	ZBTB5 (ENSCARG00000029460)	grhprb (ENSCARG00000029491)	UBA6 (ENSCARG00000030036)	ENSCARG00000030232	ENSCARG00000031312	mettl14 (ENSCARG00000031330) #21	ENSCARG00000031445 #22	NDST4 (ENSCARG00000031511) #28	ENSCARG00000031516	ugt8 (ENSCARG00000031524) #29	spock3 (ENSCARG00000031535)	tll1 (ENSCARG00000031774)	cpe (ENSCARG00000042003)	msmo1 (ENSCARG00000042278)	KLHL2 (ENSCARG00000042330)	ENSCARG00000043546	npy1r (ENSCARG00000044871)	med28 (ENSCARG00000044879)	gria2a (ENSCARG00000044890)	gria2a (ENSCARG00000044924)	glrba (ENSCARG00000044990)	ncapd3 (ENSCARG00000045173)
Cyprininae	ANCESTRAL SPECIES	559								ENSGT00940000159346.a	ENSGT00390000004179.b	ENSGT00390000009391.a.e	ENSGT00940000160246.d.a	ENSGT00940000165381.a	ENSGT00940000158826.g	ENSGT00390000000002.a.a.a.nb.b.b	ENSGT00550000075003.a #21	ENSGT00940000158131.h #22	ENSGT00940000157168.i #28	ENSGT00940000156545.b #29	ENSGT00940000157828.x	ENSGT00940000157225.a.b	ENSGT00940000157158.f	ENSGT00940000158012.y	ENSGT00940000156434.d	ENSGT00940000156418.x.b	ENSGT00940000160268.e	ENSGT00390000006192.dc.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3362														ENSCARG00000046410	mettl14 (ENSCARG00000046445) #21	PRSS12 (ENSCARG00000046479) #22
Goldfish	MODERN SPECIES		clrn2 (ENSCARG00000005369)	exoc1l (ENSCARG00000005379)	smc2 (ENSCARG00000005430)	ecpas (ENSCARG00000006187)	FBXO10 (ENSCARG00000007088)	polr1e (ENSCARG00000007161)	tmem192 (ENSCARG00000007232)	apela (ENSCARG00000007248)	ENSCARG00000007256	fnip2 (ENSCARG00000007276)	ZBTB5 (ENSCARG00000007405)	grhprb (ENSCARG00000007449)	UBA6 (ENSCARG00000008177)	ENSCARG00000009772	mettl14 (ENSCARG00000009904) #21	ENSCARG00000009910 #22	ENSCARG00000009914	ENSCARG00000009918	NDST4 (ENSCARG00000009922) #28	ugt8 (ENSCARG00000009933) #29	spock3 (ENSCARG00000009941)	tll1 (ENSCARG00000010130)	cpe (ENSCARG00000016250)	msmo1 (ENSCARG00000016294)	KLHL2 (ENSCARG00000016312)	ENSCARG00000016842	kitb (ENSCARG00000017200)	clockb (ENSCARG00000017756)	lap3 (ENSCARG00000018666)	rbm47 (ENSCARG00000019027)	uchl1 (ENSCARG00000019059)
Cyprininae_a	ANCESTRAL SPECIES	228	ENSGT00850000132319.a.a.b.c	ENSGT00940000162193.c	ENSGT00550000074857.ab	ENSGT00940000153612.A.f	ENSGT00530000063425.a.a.a.b.rd.a	ENSGT00390000013749.a	ENSGT01040000240855.a.b	ENSGT00940000159346.a	ENSGT00390000004179.b	ENSGT00390000009391.a.e	ENSGT00940000160246.d.a	ENSGT00940000165381.a	ENSGT00940000158826.g	ENSGT00390000000002.a.a.a.nb.b.b	ENSGT00550000075003.a #21	ENSGT00940000158131.h #22	ENSGT00940000157168.i #28	ENSGT00940000156545.b #29	ENSGT00940000157828.x	ENSGT00940000157225.a.b	ENSGT00940000157158.f	ENSGT00940000158012.y	ENSGT00940000156434.d	ENSGT00940000156418.x.b	ENSGT00940000160268.e	ENSGT00390000006192.cc	ENSGT00390000012574.k.a	ENSGT00940000156950.b.b	ENSGT00940000156344.a.a
Golden-line barbel	MODERN SPECIES	142	smc2 (ENSSGRG00000048500)	ecpas (ENSSGRG00000048567)	FBXO10 (ENSSGRG00000048635)	tmem192 (ENSSGRG00000048636)	apela (ENSSGRG00000048637)	ENSSGRG00000048638	tma16 (ENSSGRG00000048640)	fnip2 (ENSSGRG00000048649)	ZBTB5 (ENSSGRG00000048704)	grhprb (ENSSGRG00000048705)	ENSSGRG00000048708	UBA6 (ENSSGRG00000048710)	ENSSGRG00000048753	mettl14 (ENSSGRG00000048866) #21	mettl14 (ENSSGRG00000048867) #21	PRSS12 (ENSSGRG00000048868) #22	ENSSGRG00000048873 #28	ugt8 (ENSSGRG00000049035) #29	spock3 (ENSSGRG00000049036)	tll1 (ENSSGRG00000049076)	cpe (ENSSGRG00000050483)	msmo1 (ENSSGRG00000050510)	ENSSGRG00000050537	npy1r (ENSSGRG00000050751)	ENSSGRG00000050756	tmem144a (ENSSGRG00000050757)	gria2a (ENSSGRG00000050826)	glrba (ENSSGRG00000052356)	WDR19 (ENSSGRG00000052371)	ncapd3 (ENSSGRG00000052379)
Common carp reference	MODERN SPECIES	22	clrn2 (ENSCCRG00000059623)	exoc1l (ENSCCRG00000080353)	smc2 (ENSCCRG00000037432)	ecpas (ENSCCRG00000029192)	ENSCCRG00000029129	polr1e (ENSCCRG00000029121)	tmem192 (ENSCCRG00000029117)	ENSCCRG00000060369	tma16 (ENSCCRG00000028990)	fnip2 (ENSCCRG00000049977)	ENSCCRG00000075470	grhprb (ENSCCRG00000068184)	ENSCCRG00000009113	ENSCCRG00000015040	mettl14 (ENSCCRG00000015328) #21	ENSCCRG00000015338 #22	ENSCCRG00000058621	ENSCCRG00000073659 #28	ugt8 (ENSCCRG00000050485) #29	spock3 (ENSCCRG00000051714)	tll1 (ENSCCRG00000018355)	cpe (ENSCCRG00000026118)	msmo1 (ENSCCRG00000061831)	KLHL2 (ENSCCRG00000026066)	ENSCCRG00000040768	npy1r (ENSCCRG00000082807)	med28 (ENSCCRG00000063275)	tmem144a (ENSCCRG00000064637)	gria2a (ENSCCRG00000020037)	glrba (ENSCCRG00000024050)	ENSCCRG00000024058
Zebrafish	MODERN SPECIES		clrn2 (ENSDARG00000070321)	smc2 (ENSDARG00000017744)	exoc1l (ENSDARG00000070320)	ecpas (ENSDARG00000061952)	fbxo10 (ENSDARG00000061936)	polr1e (ENSDARG00000006434)	tmem192 (ENSDARG00000037484)	apela (ENSDARG00000094729)	ENSDARG00000037487	tma16 (ENSDARG00000008068)	fnip2 (ENSDARG00000077648)	grhprb (ENSDARG00000019986)	UBA6 (ENSDARG00000080019)	ENSDARG00000099995	mettl14 (ENSDARG00000070278) #21	PRSS12 (ENSDARG00000061830) #22	NDST4 (ENSDARG00000041776) #28	ugt8 (ENSDARG00000037455) #29	ENSDARG00000093816	spock3 (ENSDARG00000070266)	tll1 (ENSDARG00000037429)	cpe (ENSDARG00000055874)	msmo1 (ENSDARG00000055876)	KLHL2 (ENSDARG00000061786)	ENSDARG00000094202	ENSDARG00000061459	npy1r (ENSDARG00000037411)	med28 (ENSDARG00000037410)	tmem144a (ENSDARG00000037409)	gria2a (ENSDARG00000070173)	glrba (ENSDARG00000052782)
Clupeiformes	ANCESTRAL SPECIES	363															ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000004179	ENSGT00940000159346	ENSGT01040000240855	ENSGT00390000013749	ENSGT00940000160268
Atlantic herring	MODERN SPECIES	14	cryba1l2 (ENSCHAG00000025980)	ENSCHAG00000025978	rtn4rl2a (ENSCHAG00000025976)	ENSCHAG00000025975	p2rx3b (ENSCHAG00000025972)	SSRP1 (ENSCHAG00000025965)	pold4 (ENSCHAG00000025962)	kdm2aa (ENSCHAG00000025485)	TCIRG1 (ENSCHAG00000025428)	ENSCHAG00000025419	ENSCHAG00000025415	ENSCHAG00000025408	ENSCHAG00000025406	ENSCHAG00000025402	TYRP1 (ENSCHAG00000025380)	ENSCHAG00000025371 #22	NDST4 (ENSCHAG00000025335) #28	ugt8 (ENSCHAG00000025323) #29	spock3 (ENSCHAG00000025314)	tll1 (ENSCHAG00000022770)	cpe (ENSCHAG00000022631)	msmo1 (ENSCHAG00000022621)	KLHL2 (ENSCHAG00000022411)	tma16 (ENSCHAG00000022400)	ENSCHAG00000022393	ENSCHAG00000022386	ENSCHAG00000022373	tmem192 (ENSCHAG00000022362)	npy1r (ENSCHAG00000022354)	ENSCHAG00000020565	ENSCHAG00000020500
Denticle herring	MODERN SPECIES	14	ENSDCDG00000002273	ENSDCDG00000002277	chd8 (ENSDCDG00000002336)	cbln12 (ENSDCDG00000003197)	ENSDCDG00000003204	tpgs1 (ENSDCDG00000003212)	ISYNA1 (ENSDCDG00000003234)	ENSDCDG00000003370	ENSDCDG00000003419	ENSDCDG00000003432	gpc1b (ENSDCDG00000003455)	EPHB1 (ENSDCDG00000003553)	ENSDCDG00000003998	TYRP1 (ENSDCDG00000007810)	mettl14 (ENSDCDG00000007960) #21	PRSS12 (ENSDCDG00000007983) #22	NDST4 (ENSDCDG00000008113) #28	ugt8 (ENSDCDG00000008818) #29	spock3 (ENSDCDG00000008828)	ENSDCDG00000008863	ptprfb (ENSDCDG00000009990)	glula (ENSDCDG00000022356)	ENSDCDG00000022359	elovl1a (ENSDCDG00000022366)	cdc20 (ENSDCDG00000022371)	apol1 (ENSDCDG00000022379)	ENSDCDG00000022385	OSBPL1A (ENSDCDG00000022590)	ENSDCDG00000027143	ZNF521 (ENSDCDG00000027146)	ss18 (ENSDCDG00000027159)
Euteleosteomorpha	ANCESTRAL SPECIES	225															ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000006192	ENSGT00530000063255.B	ENSGT00850000132319.a.a.b	ENSGT00390000010628.a	ENSGT00530000063586.b.c.a	ENSGT00940000154372.a.a.b	ENSGT00940000154372.a.b.a	ENSGT00940000155988.c
Protacanthopterygii	ANCESTRAL SPECIES	131														ENSGT00940000156545 #29	ENSGT00940000157168 #28	ENSGT00940000158131 #22	ENSGT00550000075003.f #21	ENSGT00940000156979	ENSGT00390000000002.a.a.a.nb.b	ENSGT00390000013015	ENSGT00530000063669.a	ENSGT00390000001577	ENSGT00740000116263	ENSGT00940000158402	ENSGT00940000156077.g.b	ENSGT00940000160078	ENSGT00940000164462	ENSGT00940000155155	ENSGT00670000098059.c.b	ENSGT00390000018294	ENSGT00390000015355
Salmoninae	ANCESTRAL SPECIES	1083														ENSGT00940000156545 #29	ENSGT00940000157168 #28	ENSGT00940000158131 #22	ENSGT00550000075003.f #21	ENSGT00940000156979
Huchen	MODERN SPECIES	8903																ENSHHUG00000001286 #22
Salmoninae_a	ANCESTRAL SPECIES	257														ENSGT00940000156545.d #29	ENSGT00940000157168 #28	ENSGT00940000158131 #22	ENSGT00550000075003.f #21	ENSGT00940000156979
Oncorhynchus	ANCESTRAL SPECIES	107	ENSGT00390000013749.e.a	ENSGT00950000183159.a.v.a.a.a.b.b	ENSGT00940000157306.fb.a	ENSGT00940000155988.c.i.a	ENSGT00530000063586.b.c.a.f	ENSGT00390000010628.a	ENSGT00850000132319.a.a.b.j	ENSGT00530000063255.B	ENSGT00390000006192	ENSGT00940000158012.`b.a.a	ENSGT00940000157158	ENSGT00940000157225	ENSGT00940000157828.z	ENSGT00940000156545.c #29	ENSGT00940000157168 #28	ENSGT00940000158131 #22	ENSGT00550000075003.f #21	ENSGT00940000156979
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	51	tapt1b (ENSOMYG00000076859)	CLRN2 (ENSOMYG00000048717)	ENSOMYG00000055624	MED28 (ENSOMYG00000036280)	msmo1 (ENSOMYG00000059786)	ENSOMYG00000062860	cpe (ENSOMYG00000066197)	ENSOMYG00000059383	tll1 (ENSOMYG00000076072)	ENSOMYG00000049847	spock3 (ENSOMYG00000050679)	ENSOMYG00000059247	ENSOMYG00000066210	ENSOMYG00000068313 #29	ENSOMYG00000061242 #28	ENSOMYG00000072749 #22	ENSOMYG00000063381 #21	ENSOMYG00000050690	ENSOMYG00000068820	ENSOMYG00000024857	ENSOMYG00000068577
Rainbow trout	MODERN SPECIES	123															ENSOMYG00000061564 #28	ENSOMYG00000071620 #22	ENSOMYG00000048760 #21	ENSOMYG00000070774
Oncorhynchus_a	ANCESTRAL SPECIES	280												ENSGT00940000157225	ENSGT00940000157828.y	ENSGT00940000156545.d #29	ENSGT00940000157168 #28	ENSGT00940000158131 #22	ENSGT00550000075003.f #21	ENSGT00940000156979
Coho salmon	MODERN SPECIES	36								ENSOKIG00005036000	spock3 (ENSOKIG00005035632)	ENSOKIG00005035627	ENSOKIG00005035623	ENSOKIG00005035614 #29	ENSOKIG00005035599 #28	ENSOKIG00005035586	ENSOKIG00005035583	PRSS12 (ENSOKIG00005035575) #22	mettl14 (ENSOKIG00005035558) #21	RBM47 (ENSOKIG00005035532)	ENSOKIG00005035515	ncapg (ENSOKIG00005035325)	ENSOKIG00005035268	ENSOKIG00005035250	ENSOKIG00005035211	ENSOKIG00005035199	fam114a1 (ENSOKIG00005035104)	ENSOKIG00005035067	ENSOKIG00005035060	ENSOKIG00005034993	ENSOKIG00005034887	WDR19 (ENSOKIG00005034133)	ENSOKIG00005034108
Salmo	ANCESTRAL SPECIES	657																ENSGT00940000158131 #22	ENSGT00550000075003.f #21
Atlantic salmon	MODERN SPECIES	546																ENSSSAG00000098698 #22	ENSSSAG00000087224 #21
Northern pike	MODERN SPECIES	24	qdpr (ENSELUG00000005795)	tll1 (ENSELUG00000005866)	ENSELUG00000005819	ENSELUG00000005835	cpe (ENSELUG00000005902)	msmo1 (ENSELUG00000005920)	med28 (ENSELUG00000005930)	lap3 (ENSELUG00000001147)	clrn2 (ENSELUG00000005969)	ENSELUG00000005992	ENSELUG00000005976	ENSELUG00000001531	spock3 (ENSELUG00000006004)	ugt8 (ENSELUG00000006013) #29	ENSELUG00000006040 #28	PRSS12 (ENSELUG00000006061) #22	mettl14 (ENSELUG00000030494) #21	rbm47 (ENSELUG00000006148)	ENSELUG00000006237	ENSELUG00000027158	ENSELUG00000000204	ncapg (ENSELUG00000006446)	slit2 (ENSELUG00000006536)	ENSELUG00000034696	ENSELUG00000029825	ENSELUG00000028596	ENSELUG00000006576	hpf1 (ENSELUG00000006606)	ENSELUG00000006657 #13	ITLN1 (ENSELUG00000006682)	CHRNA9 (ENSELUG00000034602)
Acanthomorphata	ANCESTRAL SPECIES	80	ENSGT00940000156806	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000166330	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT01100000263492.b.b.b.a.b.a.a.b.b	ENSGT00940000160334	ENSGT00940000154336
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT01100000263492.b.b.b.a.b.a.a.b.b	ENSGT00940000160334	ENSGT00940000154336
Percomorphaceae	ANCESTRAL SPECIES	17	ENSGT00940000178602	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT01100000263492.b.b.b.a.b.a.a.b.b	ENSGT00940000160334	ENSGT00940000154336
Tiger tail seahorse	MODERN SPECIES	257	aptx (ENSHCOG00000018216)	ENSHCOG00000018191	sparcl1 (ENSHCOG00000018185)	ENSHCOG00000018166	cnga1a (ENSHCOG00000018140)	ENSHCOG00000018082	bdh2 (ENSHCOG00000018061)	ENSHCOG00000018029	cisd2 (ENSHCOG00000017967)	suclg1 (ENSHCOG00000017954)	ctnna2 (ENSHCOG00000017925)	LRRTM1 (ENSHCOG00000017874)	ADRA1D (ENSHCOG00000017866)	ENSHCOG00000017850	mettl14 (ENSHCOG00000017822) #21	PRSS12 (ENSHCOG00000017771) #22	ENSHCOG00000017731 #28	ENSHCOG00000017691	ugt8 (ENSHCOG00000017679) #29	spock3 (ENSHCOG00000017653)	ENSHCOG00000017639
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT01100000263492.b.b.b.a.b.a.a.b.b	ENSGT00940000160334	ENSGT00940000154336
Ovalentaria	ANCESTRAL SPECIES		ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Atherinomorphae	ANCESTRAL SPECIES	20	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Oryzias	ANCESTRAL SPECIES	15	ENSGT00730000112195	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000166330	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Oryzias_b	ANCESTRAL SPECIES	29	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00940000179599	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000166330	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Javanese ricefish	MODERN SPECIES		gucy1a1 (ENSOJAG00000006979)	gucy1b1 (ENSOJAG00000006885)	scpp5 (ENSOJAG00000006867)	cnga1a (ENSOJAG00000006670)	TACR3 (ENSOJAG00000006521)	bdh2 (ENSOJAG00000006318)	ENSOJAG00000006236	cisd2 (ENSOJAG00000006198)	SUCLG1 (ENSOJAG00000005909)	ENSOJAG00000005843	LRRTM1 (ENSOJAG00000005833)	ctnna2 (ENSOJAG00000005205)	ADRA1D (ENSOJAG00000005139)	ENSOJAG00000005127	mettl14 (ENSOJAG00000005079) #21	PRSS12 (ENSOJAG00000005001) #22	ENSOJAG00000003664 #28	ugt8 (ENSOJAG00000003486) #29	spock3 (ENSOJAG00000003474)	ENSOJAG00000003395	DLC1 (ENSOJAG00000003313)	ENSOJAG00000003263	ENSOJAG00000003228	doc2d (ENSOJAG00000003208)	serping1 (ENSOJAG00000003185)	tmem134 (ENSOJAG00000003174)	aip (ENSOJAG00000003163)	cdk2ap2 (ENSOJAG00000003156)	GPR83 (ENSOJAG00000003142)	ENSOJAG00000003131	ENSOJAG00000003122
Indian medaka	MODERN SPECIES	21	sparcl1 (ENSOMEG00000007910)	odam (ENSOMEG00000007928)	ENSOMEG00000007940	scpp5 (ENSOMEG00000007954)	cnga1a (ENSOMEG00000007986)	TACR3 (ENSOMEG00000008412)	bdh2 (ENSOMEG00000008604)	ENSOMEG00000008651	cisd2 (ENSOMEG00000008665)	suclg1 (ENSOMEG00000008705)	LRRTM1 (ENSOMEG00000008738)	ctnna2 (ENSOMEG00000008786)	ADRA1D (ENSOMEG00000008810)	ENSOMEG00000008846	mettl14 (ENSOMEG00000008909) #21	PRSS12 (ENSOMEG00000008977) #22	ENSOMEG00000009110 #28	ugt8 (ENSOMEG00000009168) #29	spock3 (ENSOMEG00000009196)	ENSOMEG00000009234	DLC1 (ENSOMEG00000009365)	ufsp2 (ENSOMEG00000009502)	gucy1a1 (ENSOMEG00000009569)	gucy1b1 (ENSOMEG00000009617)	fabp2 (ENSOMEG00000009628) #15	USP53 (ENSOMEG00000009653) #17	myoz2b (ENSOMEG00000009667) #18	ENSOMEG00000009700 #19	ENSOMEG00000009744	slc22a7b.1 (ENSOMEG00000009767)	ENSOMEG00000009899
Oryzias_a	ANCESTRAL SPECIES	23	ENSGT00730000112195	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000166330	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Japanese Medaka HdrR	MODERN SPECIES		scpp5 (ENSORLG00000019321)	cnga1a (ENSORLG00000024168)	tacr3a (ENSORLG00000006145)	bdh2 (ENSORLG00000006131)	ENSORLG00000025365	ENSORLG00000023021	bdh2 (ENSORLG00000025911)	ENSORLG00000006118	cisd2 (ENSORLG00000006106)	SUCLG1 (ENSORLG00000006097)	LRRTM1 (ENSORLG00000024732)	ctnna2 (ENSORLG00000026159)	ADRA1D (ENSORLG00000006056)	ENSORLG00000019804	mettl14 (ENSORLG00000006053) #21	PRSS12 (ENSORLG00000022161) #22	ENSORLG00000006029 #28	ENSORLG00000023982	ugt8 (ENSORLG00000005985) #29	spock3 (ENSORLG00000005978)	ENSORLG00000005967	DLC1 (ENSORLG00000005951)	ENSORLG00000005932	ENSORLG00000005922	doc2d (ENSORLG00000023518)	serping1 (ENSORLG00000005916)	tmem134 (ENSORLG00000005906)	aip (ENSORLG00000005898)	cdk2ap2 (ENSORLG00000029903)	GPR83 (ENSORLG00000025759)	ankrd49 (ENSORLG00000024223)
Chinese medaka	MODERN SPECIES	96															mettl14 (ENSOSIG00000004359) #21	PRSS12 (ENSOSIG00000004935) #22	NDST4 (ENSOSIG00000004972) #28	ugt8 (ENSOSIG00000005896) #29	spock3 (ENSOSIG00000005898)	ENSOSIG00000005912	DLC1 (ENSOSIG00000005932)	ENSOSIG00000006383	ENSOSIG00000006384	ENSOSIG00000006385	ENSOSIG00000006386	serping1 (ENSOSIG00000006387)	tmem134 (ENSOSIG00000006388)	aip (ENSOSIG00000006390)	cdk2ap2 (ENSOSIG00000006393)	GPR83 (ENSOSIG00000006395)	ankrd49 (ENSOSIG00000006399)
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Cyprinodontoidei	ANCESTRAL SPECIES	15	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00740000115955.D	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00740000115955.D	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Poecilia	ANCESTRAL SPECIES	6	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00740000115955.D	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
NAME_6	ANCESTRAL SPECIES	4	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000182429	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00740000115955.D	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Sailfin molly	MODERN SPECIES	285												CTNNA2 (ENSPLAG00000006367)	ADRA1D (ENSPLAG00000006313)	ENSPLAG00000006296	mettl14 (ENSPLAG00000006272) #21	PRSS12 (ENSPLAG00000006228) #22	ENSPLAG00000006186 #28
Amazon molly	MODERN SPECIES	296	scpp5 (ENSPFOG00000005320)	cnga1a (ENSPFOG00000005330)	ENSPFOG00000005374	bdh2 (ENSPFOG00000022157)	ENSPFOG00000005436	cisd2 (ENSPFOG00000005678)	suclg1 (ENSPFOG00000005681)	ENSPFOG00000020386	ctnna2 (ENSPFOG00000005755)	LRRTM1 (ENSPFOG00000020387)	ENSPFOG00000005837	ADRA1D (ENSPFOG00000005849)	ENSPFOG00000020388	ENSPFOG00000022092	mettl14 (ENSPFOG00000005875) #21	PRSS12 (ENSPFOG00000005977) #22	ENSPFOG00000006177 #28	ugt8 (ENSPFOG00000006587) #29	spock3 (ENSPFOG00000006689)	SLC44A1 (ENSPFOG00000006837)	DLC1 (ENSPFOG00000007028)	ENSPFOG00000007312	ENSPFOG00000007477	doc2d (ENSPFOG00000007517)	serping1 (ENSPFOG00000007612)	tmem134 (ENSPFOG00000007689)	aip (ENSPFOG00000007751)	cdk2ap2 (ENSPFOG00000007836)	GPR83 (ENSPFOG00000007868)	ankrd49 (ENSPFOG00000007925)	ENSPFOG00000007935
Guppy	MODERN SPECIES	439	polr1e (ENSPREG00000009470)	ENSPREG00000009458	ENSPREG00000009437	cnga1a (ENSPREG00000009416)	ENSPREG00000009400	bdh2 (ENSPREG00000009365)	ENSPREG00000009342	cisd2 (ENSPREG00000009328)	suclg1 (ENSPREG00000009291)	LRRTM1 (ENSPREG00000009276)	ENSPREG00000009264	ctnna2 (ENSPREG00000009171)	ADRA1D (ENSPREG00000009126)	ENSPREG00000009111	mettl14 (ENSPREG00000009092) #21	PRSS12 (ENSPREG00000009070) #22	ENSPREG00000009037 #28	ugt8 (ENSPREG00000008999) #29	spock3 (ENSPREG00000008964)	SLC44A1 (ENSPREG00000008914)	DLC1 (ENSPREG00000008816)	ENSPREG00000008770	ENSPREG00000008744	doc2d (ENSPREG00000008728)	serping1 (ENSPREG00000008703)	tmem134 (ENSPREG00000008637)	aip (ENSPREG00000008592)	cdk2ap2 (ENSPREG00000008571)	GPR83 (ENSPREG00000008559)	ankrd49 (ENSPREG00000008550)	cntf (ENSPREG00000008534)
Platyfish	MODERN SPECIES	19	scpp5 (ENSXMAG00000028166)	cnga1a (ENSXMAG00000005912)	ENSXMAG00000025288	bdh2 (ENSXMAG00000025338)	ENSXMAG00000005936	cisd2 (ENSXMAG00000005961)	suclg1 (ENSXMAG00000005966)	ENSXMAG00000023963	LRRTM1 (ENSXMAG00000020008)	ctnna2 (ENSXMAG00000004800)	ADRA1D (ENSXMAG00000004797)	ENSXMAG00000020007	ENSXMAG00000026999	ENSXMAG00000024313	mettl14 (ENSXMAG00000017846) #21	PRSS12 (ENSXMAG00000017835) #22	ENSXMAG00000017808 #28	ugt8 (ENSXMAG00000023571) #29	spock3 (ENSXMAG00000024327)	SLC44A1 (ENSXMAG00000016107)	DLC1 (ENSXMAG00000009985)	LONRF1 (ENSXMAG00000009974)	ENSXMAG00000009968	doc2d (ENSXMAG00000009950)	serping1 (ENSXMAG00000009930)	tmem134 (ENSXMAG00000009915)	aip (ENSXMAG00000021976)	cdk2ap2 (ENSXMAG00000028441)	GPR83 (ENSXMAG00000028552)	ankrd49 (ENSXMAG00000009888)	cntf (ENSXMAG00000009887)
NAME_4	ANCESTRAL SPECIES	70				ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Sheepshead minnow	MODERN SPECIES	244															mettl14 (ENSCVAG00000018016) #21	PRSS12 (ENSCVAG00000018087) #22	NDST4 (ENSCVAG00000018201) #28	ugt8 (ENSCVAG00000018225) #29	spock3 (ENSCVAG00000018239)	SLC44A1 (ENSCVAG00000018295)	DLC1 (ENSCVAG00000018437)	LONRF1 (ENSCVAG00000000483)	ENSCVAG00000018466	ENSCVAG00000018478	RAPGEF4 (ENSCVAG00000018570)	MAP3K20 (ENSCVAG00000018582)	cdca7a (ENSCVAG00000000487)	sp3a (ENSCVAG00000018614)	OLA1 (ENSCVAG00000018673)	sp9 (ENSCVAG00000018687)	CIR1 (ENSCVAG00000018732)
Mummichog	MODERN SPECIES	2391													ADRA1D (ENSFHEG00000009860)	ENSFHEG00000009848	mettl14 (ENSFHEG00000009836) #21	PRSS12 (ENSFHEG00000009798) #22	NDST4 (ENSFHEG00000009744) #28	ENSFHEG00000009700	pthlha (ENSFHEG00000009690)	rpl18a (ENSFHEG00000009674)	xpot (ENSFHEG00000009648)	rtcb (ENSFHEG00000009595)	ENSFHEG00000009568	lta4h (ENSFHEG00000009526)	TBC1D30 (ENSFHEG00000009361)	prkcq (ENSFHEG00000009321)	SFMBT2 (ENSFHEG00000009280)	tmem110l (ENSFHEG00000009110)	ITIH5 (ENSFHEG00000009085)	ENSFHEG00000009067	atp5f1c (ENSFHEG00000009037)
Aplocheiloidei	ANCESTRAL SPECIES	17	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Mangrove rivulus	MODERN SPECIES		aptx (ENSKMAG00000000117)	ENSKMAG00000000116	odam (ENSKMAG00000000115)	scpp5 (ENSKMAG00000000114)	cnga1a (ENSKMAG00000000113)	TACR3 (ENSKMAG00000000112)	bdh2 (ENSKMAG00000000111)	ENSKMAG00000000110	cisd2 (ENSKMAG00000000109)	suclg1 (ENSKMAG00000000108)	LRRTM1 (ENSKMAG00000000107)	ctnna2 (ENSKMAG00000000106)	ADRA1D (ENSKMAG00000000105)	ENSKMAG00000000104	mettl14 (ENSKMAG00000000103) #21	PRSS12 (ENSKMAG00000000102) #22	ENSKMAG00000000101 #28	ugt8 (ENSKMAG00000000100) #29	spock3 (ENSKMAG00000000099)	SLC44A1 (ENSKMAG00000000098)	DLC1 (ENSKMAG00000000097)	ENSKMAG00000000096	ENSKMAG00000000095	doc2d (ENSKMAG00000000094)	serping1 (ENSKMAG00000000093)	tmem134 (ENSKMAG00000000092)	aip (ENSKMAG00000000091)	cdk2ap2 (ENSKMAG00000000090)	GPR83 (ENSKMAG00000000089)	ankrd49 (ENSKMAG00000000088)	cntf (ENSKMAG00000000087)
Turquoise killifish	MODERN SPECIES	1611	ENSNFUG00015001562	TACR3 (ENSNFUG00015001541)	bdh2 (ENSNFUG00015001532)	SLC9B2 (ENSNFUG00015001499)	CISD2 (ENSNFUG00015001471)	SUCLG1 (ENSNFUG00015001449)	ENSNFUG00015001443	ENSNFUG00015001440	ENSNFUG00015001439	LRRTM1 (ENSNFUG00015001436)	ctnna2 (ENSNFUG00015001311)	ADRA1D (ENSNFUG00015001279)	ENSNFUG00015001275	ENSNFUG00015001269	mettl14 (ENSNFUG00015001255) #21	ENSNFUG00015001248 #22	ENSNFUG00015001191	lpin1a (ENSNFUG00015001104)	ENSNFUG00015001059	C11ORF82 (ENSNFUG00015001056)	ENSNFUG00015001052	ENSNFUG00015001048	NDST4 (ENSNFUG00015000947) #28	ugt8 (ENSNFUG00015000921) #29	spock3 (ENSNFUG00015000913)	SLC44A1A (ENSNFUG00015000886)	DLC1 (ENSNFUG00015000810)	LONRF1 (ENSNFUG00015000785)	ENSNFUG00015000780	ENSNFUG00015000774	doc2d (ENSNFUG00015000765)
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Pomacentridae	ANCESTRAL SPECIES	8	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00980000198603.B
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00980000198603.B
Amphiprion	ANCESTRAL SPECIES		ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00940000177159.c.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Clown anemonefish	MODERN SPECIES	1582								LRRTM1 (ENSAOCG00000006568)	CTNNA2 (ENSAOCG00000006559)	ADRA1D (ENSAOCG00000006521)	ENSAOCG00000006515	ENSAOCG00000006503	ENSAOCG00000006486	ENSAOCG00000000308	mettl14 (ENSAOCG00000006449) #21	PRSS12 (ENSAOCG00000006400) #22
Orange clownfish	MODERN SPECIES	17	cnga1a (ENSAPEG00000017400)	TACR3 (ENSAPEG00000017414)	bdh2 (ENSAPEG00000017429)	ENSAPEG00000017479	cisd2 (ENSAPEG00000017513)	suclg1 (ENSAPEG00000017532)	ctnna2 (ENSAPEG00000017594)	LRRTM1 (ENSAPEG00000017639)	ADRA1D (ENSAPEG00000017644)	ENSAPEG00000017653	ENSAPEG00000017674	ENSAPEG00000017686	ENSAPEG00000017701	ENSAPEG00000017713	mettl14 (ENSAPEG00000017730) #21	PRSS12 (ENSAPEG00000017799) #22	ENSAPEG00000017836	NDST4 (ENSAPEG00000017847) #28	ugt8 (ENSAPEG00000017903) #29	spock3 (ENSAPEG00000017925)	SLC44A1 (ENSAPEG00000017943)	DLC1 (ENSAPEG00000017998)	ENSAPEG00000018018	ENSAPEG00000018036	ENSAPEG00000018055	doc2d (ENSAPEG00000018075)	serping1 (ENSAPEG00000018091)	tmem134 (ENSAPEG00000018129)	aip (ENSAPEG00000018153)	cdk2ap2 (ENSAPEG00000018169)	GPR83 (ENSAPEG00000018197)
Spiny chromis	MODERN SPECIES	38							LRRTM1 (ENSAPOG00000006345)	ENSAPOG00000006383	ctnna2 (ENSAPOG00000006448)	ADRA1D (ENSAPOG00000000895)	ENSAPOG00000006483	ENSAPOG00000006492	ENSAPOG00000006523	ENSAPOG00000006544	mettl14 (ENSAPOG00000006601) #21	PRSS12 (ENSAPOG00000006675) #22	ENSAPOG00000006711 #28	ugt8 (ENSAPOG00000006742) #29	spock3 (ENSAPOG00000006754)	SLC44A1 (ENSAPOG00000000736)	DLC1 (ENSAPOG00000006948)	ENSAPOG00000007054	ENSAPOG00000007093
Bicolor damselfish	MODERN SPECIES	265	scpp5 (ENSSPAG00000013559)	cnga1a (ENSSPAG00000013545)	TACR3 (ENSSPAG00000013525)	bdh2 (ENSSPAG00000013492)	ENSSPAG00000013442	cisd2 (ENSSPAG00000013427)	suclg1 (ENSSPAG00000013409)	ENSSPAG00000013397	ENSSPAG00000013390	ENSSPAG00000013383	LRRTM1 (ENSSPAG00000013376)	ctnna2 (ENSSPAG00000013323)	ADRA1D (ENSSPAG00000013305)	ENSSPAG00000013292	mettl14 (ENSSPAG00000013237) #21	PRSS12 (ENSSPAG00000013141) #22	ENSSPAG00000013083 #28	ugt8 (ENSSPAG00000013050) #29	spock3 (ENSSPAG00000013031)	SLC44A1 (ENSSPAG00000013020)
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Midas cichlid	MODERN SPECIES	1804															mettl14 (ENSACIG00000010309) #21	PRSS12 (ENSACIG00000010286) #22	NDST4 (ENSACIG00000010252) #28	ugt8 (ENSACIG00000010230) #29	spock3 (ENSACIG00000010185)	SLC44A1 (ENSACIG00000010146)	ENSACIG00000010136	DLC1 (ENSACIG00000010095)	ENSACIG00000010040	ENSACIG00000010009	doc2d (ENSACIG00000009936)	serping1 (ENSACIG00000009869)	tmem134 (ENSACIG00000009851)	aip (ENSACIG00000009829)	cdk2ap2 (ENSACIG00000009813)
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Nile tilapia	MODERN SPECIES	18	sparcl1 (ENSONIG00000014544)	odam (ENSONIG00000014550)	scpp5 (ENSONIG00000014557)	cnga1a (ENSONIG00000014559)	tacr3a (ENSONIG00000039363)	bdh2 (ENSONIG00000014564)	ENSONIG00000034335	cisd2 (ENSONIG00000041801)	suclg1 (ENSONIG00000014566)	ENSONIG00000040364	ctnna2 (ENSONIG00000014573)	LRRTM1 (ENSONIG00000020971)	ADRA1D (ENSONIG00000014583)	ENSONIG00000014584	mettl14 (ENSONIG00000014586) #21	PRSS12 (ENSONIG00000014590) #22	ENSONIG00000014591 #28	ugt8 (ENSONIG00000014598) #29	spock3 (ENSONIG00000014601)	SLC44A1 (ENSONIG00000014604)	DLC1 (ENSONIG00000014607)	ENSONIG00000014612	ENSONIG00000042853	doc2d (ENSONIG00000014615)	serping1 (ENSONIG00000014618)	tmem134 (ENSONIG00000014624)	aip (ENSONIG00000014625)	cdk2ap2 (ENSONIG00000042338)	ENSONIG00000034323	ENSONIG00000039586	gpr83 (ENSONIG00000034729)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Lyretail cichlid	MODERN SPECIES	301	ENSNBRG00000014273	ENSNBRG00000014281	scpp5 (ENSNBRG00000014290)	cnga1a (ENSNBRG00000014310)	TACR3 (ENSNBRG00000014315)	bdh2 (ENSNBRG00000014330)	ENSNBRG00000014347	cisd2 (ENSNBRG00000014387)	suclg1 (ENSNBRG00000014398)	ctnna2 (ENSNBRG00000014418)	LRRTM1 (ENSNBRG00000014476)	ADRA1D (ENSNBRG00000014484)	ENSNBRG00000014496	ENSNBRG00000014512	mettl14 (ENSNBRG00000014523) #21	PRSS12 (ENSNBRG00000014562) #22	NDST4 (ENSNBRG00000014603) #28	ugt8 (ENSNBRG00000014639) #29	spock3 (ENSNBRG00000014656)	SLC44A1 (ENSNBRG00000014686)	ENSNBRG00000014765	DLC1 (ENSNBRG00000014789)	ENSNBRG00000014845	ENSNBRG00000014861	doc2d (ENSNBRG00000014876)	serping1 (ENSNBRG00000014904)	tmem134 (ENSNBRG00000014928)	aip (ENSNBRG00000014948)	cdk2ap2 (ENSNBRG00000014970)	GPR83 (ENSNBRG00000014989)	ENSNBRG00000015018
Haplochromini	ANCESTRAL SPECIES	3	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Burton s mouthbrooder	MODERN SPECIES	364													ADRA1D (ENSHBUG00000003973)	ENSHBUG00000003967	mettl14 (ENSHBUG00000003958) #21	PRSS12 (ENSHBUG00000003927) #22	NDST4 (ENSHBUG00000003882) #28	ugt8 (ENSHBUG00000003824) #29	spock3 (ENSHBUG00000003806)	SLC44A1 (ENSHBUG00000003799)	DLC1 (ENSHBUG00000003771)	ENSHBUG00000003725	ENSHBUG00000003710	doc2d (ENSHBUG00000003698)	serping1 (ENSHBUG00000003656)	tmem134 (ENSHBUG00000003644)	aip (ENSHBUG00000003618)	cdk2ap2 (ENSHBUG00000003587)	GPR83 (ENSHBUG00000003574)	ankrd49 (ENSHBUG00000003571)	cntf (ENSHBUG00000003564)
Haplochromini_A	ANCESTRAL SPECIES	2	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
P. nyererei	MODERN SPECIES	402													ADRA1D (ENSPNYG00000022630)	ENSPNYG00000022635	mettl14 (ENSPNYG00000022649) #21	PRSS12 (ENSPNYG00000022664) #22	NDST4 (ENSPNYG00000022676) #28	ugt8 (ENSPNYG00000022689) #29	spock3 (ENSPNYG00000022704)	SLC44A1 (ENSPNYG00000022715)	DLC1 (ENSPNYG00000022734)	ENSPNYG00000022744	ENSPNYG00000022753	doc2d (ENSPNYG00000022757)	serping1 (ENSPNYG00000022765)	tmem134 (ENSPNYG00000022770)	aip (ENSPNYG00000022794)	cdk2ap2 (ENSPNYG00000022803)	GPR83 (ENSPNYG00000022812)	ankrd49 (ENSPNYG00000022823)	ENSPNYG00000022827
Haplochromini_B	ANCESTRAL SPECIES	8	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Eastern happy	MODERN SPECIES	18	bdh2 (ENSACLG00000018576)	ENSACLG00000018482	cisd2 (ENSACLG00000018463)	suclg1 (ENSACLG00000018417)	ENSACLG00000018404	ENSACLG00000018383	ENSACLG00000018373	ENSACLG00000018360	LRRTM1 (ENSACLG00000018353)	ctnna2 (ENSACLG00000018180)	ADRA1D (ENSACLG00000018077)	ENSACLG00000018071	ENSACLG00000018060	ENSACLG00000018042	mettl14 (ENSACLG00000018000) #21	PRSS12 (ENSACLG00000017961) #22	NDST4 (ENSACLG00000017852) #28	ugt8 (ENSACLG00000017829) #29	spock3 (ENSACLG00000017799)	SLC44A1 (ENSACLG00000017703)	ENSACLG00000017682	DLC1 (ENSACLG00000017556)	LONRF1 (ENSACLG00000017464)	ENSACLG00000017452	ENSACLG00000017434	doc2d (ENSACLG00000017370)	serping1 (ENSACLG00000017311)	tmem134 (ENSACLG00000017254)	aip (ENSACLG00000017206)	cdk2ap2 (ENSACLG00000017169)	GPR83 (ENSACLG00000017137)
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1109	ENSMZEG00005022629	ENSMZEG00005022632	scpp5 (ENSMZEG00005022633)	cnga1a (ENSMZEG00005022635)	TACR3 (ENSMZEG00005022642)	bdh2 (ENSMZEG00005023604)	ENSMZEG00005023608	cisd2 (ENSMZEG00005023611)	suclg1 (ENSMZEG00005023612)	ctnna2 (ENSMZEG00005023618)	LRRTM1 (ENSMZEG00005023622)	ADRA1D (ENSMZEG00005023624)	ENSMZEG00005023626	ENSMZEG00005023627	mettl14 (ENSMZEG00005023630) #21	ENSMZEG00005023632 #22	NDST4 (ENSMZEG00005023633) #28	ugt8 (ENSMZEG00005023634) #29	spock3 (ENSMZEG00005023636)	SLC44A1 (ENSMZEG00005023637)	DLC1 (ENSMZEG00005023639)	LONRF1 (ENSMZEG00005023641)	ENSMZEG00005023642	doc2d (ENSMZEG00005023644)	serping1 (ENSMZEG00005023646)	tmem134 (ENSMZEG00005023647)	aip (ENSMZEG00005023648)	cdk2ap2 (ENSMZEG00005023649)	GPR83 (ENSMZEG00005023651)	ENSMZEG00005023652	ankrd49 (ENSMZEG00005023653)
Zebra mbuna	MODERN SPECIES	475															ENSMZEG00005023971	ENSMZEG00005023972 #22
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT01100000263492.b.b.b.a.b.a.a.b.b.d	ENSGT00940000160334	ENSGT00940000154336
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Ballan wrasse	MODERN SPECIES	279	ENSLBEG00000009421	ENSLBEG00000009156	septin9b (ENSLBEG00000008643)	rbm47 (ENSLBEG00000008436)	ENSLBEG00000008373	ENSLBEG00000008353	cntf (ENSLBEG00000008342)	ENSLBEG00000008314	ankrd49 (ENSLBEG00000008295)	GPR83 (ENSLBEG00000008254)	cdk2ap2 (ENSLBEG00000008213)	aip (ENSLBEG00000008184)	ENSLBEG00000008161	ENSLBEG00000008141	mettl14 (ENSLBEG00000008085) #21	PRSS12 (ENSLBEG00000007988) #22	NDST4 (ENSLBEG00000007900) #28	ugt8 (ENSLBEG00000007855) #29
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Perciformes	ANCESTRAL SPECIES	2	ENSGT00940000179599	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Perciformes_a	ANCESTRAL SPECIES		ENSGT00940000179599	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Channel bull blenny	MODERN SPECIES		ENSCGOG00000000324	ENSCGOG00000000328	scpp5 (ENSCGOG00000000332)	cnga1a (ENSCGOG00000000336)	TACR3 (ENSCGOG00000000342)	bdh2 (ENSCGOG00000000375)	ENSCGOG00000000405	cisd2 (ENSCGOG00000000443)	suclg1 (ENSCGOG00000000489)	ctnna2 (ENSCGOG00000000736)	LRRTM1 (ENSCGOG00000001246)	ADRA1D (ENSCGOG00000001249)	ENSCGOG00000001251	ENSCGOG00000001254	mettl14 (ENSCGOG00000001256) #21	PRSS12 (ENSCGOG00000001351) #22	ENSCGOG00000001419 #28	ENSCGOG00000002252	ugt8 (ENSCGOG00000002253) #29	spock3 (ENSCGOG00000002254)	SLC44A1 (ENSCGOG00000002257)	DLC1 (ENSCGOG00000002484)	ENSCGOG00000002493	LONRF1 (ENSCGOG00000002496)	ENSCGOG00000002502	doc2d (ENSCGOG00000002516)	serping1 (ENSCGOG00000002518)	tmem134 (ENSCGOG00000002533)	aip (ENSCGOG00000002540)	cdk2ap2 (ENSCGOG00000002544)	GPR83 (ENSCGOG00000002553)
Pike perch	MODERN SPECIES	179							ENSSLUG00000015002	LRRTM1 (ENSSLUG00000014992)	ctnna2 (ENSSLUG00000014375)	ENSSLUG00000014323	ENSSLUG00000014313	ADRA1D (ENSSLUG00000014309)	ENSSLUG00000014302	ENSSLUG00000014298	mettl14 (ENSSLUG00000014275) #21	PRSS12 (ENSSLUG00000014248) #22	ENSSLUG00000014132 #28	ugt8 (ENSSLUG00000014107) #29	spock3 (ENSSLUG00000014095)	SLC44A1 (ENSSLUG00000014077)	ENSSLUG00000014067	DLC1 (ENSSLUG00000013994)	ENSSLUG00000013986	LONRF1 (ENSSLUG00000013980)	ENSSLUG00000013963	doc2d (ENSSLUG00000013951)	serping1 (ENSSLUG00000013921)	tmem134 (ENSSLUG00000013915)	aip (ENSSLUG00000013907)	cdk2ap2 (ENSSLUG00000013900)
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00400000023138	ENSGT00940000177216	ENSGT01070000255175	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00740000115955.D.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Lumpfish	MODERN SPECIES		odam (ENSCLMG00005005438)	ENSCLMG00005005437	ENSCLMG00005005434	ENSCLMG00005005433	cnga1a (ENSCLMG00005005432)	TACR3 (ENSCLMG00005005241)	bdh2 (ENSCLMG00005005238)	ENSCLMG00005004048	cisd2 (ENSCLMG00005004046)	suclg1 (ENSCLMG00005004045)	LRRTM1 (ENSCLMG00005004041)	ctnna2 (ENSCLMG00005003050)	ADRA1D (ENSCLMG00005002967)	ENSCLMG00005002962	mettl14 (ENSCLMG00005002849) #21	PRSS12 (ENSCLMG00005002812) #22	ENSCLMG00005007460 #28	ugt8 (ENSCLMG00005007454) #29	spock3 (ENSCLMG00005007452)	SLC44A1 (ENSCLMG00005007359)	ENSCLMG00005007356	DLC1 (ENSCLMG00005007045)	ENSCLMG00005007041	ENSCLMG00005007039	doc2d (ENSCLMG00005007038)	serping1 (ENSCLMG00005006957)	tmem134 (ENSCLMG00005006953)	aip (ENSCLMG00005006952)	cdk2ap2 (ENSCLMG00005006949)	GPR83 (ENSCLMG00005006948)	ankrd49 (ENSCLMG00005006946)
Stickleback	MODERN SPECIES	4	ENSGACG00000017889	sparcl1 (ENSGACG00000017892)	odam (ENSGACG00000017898)	cnga1a (ENSGACG00000017900)	TACR3 (ENSGACG00000017903)	bdh2 (ENSGACG00000017906)	ENSGACG00000017922	cisd2 (ENSGACG00000017930)	suclg1 (ENSGACG00000017932)	ctnna2 (ENSGACG00000017985)	LRRTM1 (ENSGACG00000017992)	ADRA1D (ENSGACG00000017994)	ENSGACG00000017996	ENSGACG00000018001	mettl14 (ENSGACG00000018009) #21	PRSS12 (ENSGACG00000018013) #22	ENSGACG00000018022 #28	ugt8 (ENSGACG00000018024) #29	spock3 (ENSGACG00000018028)	SLC44A1 (ENSGACG00000018031)	DLC1 (ENSGACG00000018034)	LONRF1 (ENSGACG00000018037)	ENSGACG00000018047	doc2d (ENSGACG00000018051)	serping1 (ENSGACG00000018054)	tmem134 (ENSGACG00000018056)	aip (ENSGACG00000018060)	cdk2ap2 (ENSGACG00000018065)	GPR83 (ENSGACG00000018066)	ankrd49 (ENSGACG00000018070)	GRIA2 (ENSGACG00000018071)
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.d	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
European seabass	MODERN SPECIES	20	ENSDLAG00005034495	scpp5 (ENSDLAG00005001517)	cnga1a (ENSDLAG00005001510)	TACR3 (ENSDLAG00005001481)	bdh2 (ENSDLAG00005001375)	ENSDLAG00005026321	cisd2 (ENSDLAG00005026320)	suclg1 (ENSDLAG00005026319)	ENSDLAG00005033412	ctnna2 (ENSDLAG00005026311)	ENSDLAG00005026305	ENSDLAG00005026304	ENSDLAG00005005187	ENSDLAG00005027483	mettl14 (ENSDLAG00005026301) #21	ENSDLAG00005026300 #22	ENSDLAG00005026298 #28	ugt8 (ENSDLAG00005026297) #29	spock3 (ENSDLAG00005026459)	ENSDLAG00005026294	ENSDLAG00005026287	ENSDLAG00005026283	ENSDLAG00005026281	doc2d (ENSDLAG00005026280)	serping1 (ENSDLAG00005026279)	ENSDLAG00005026277	ENSDLAG00005026276	ENSDLAG00005034414	ENSDLAG00005026273	ENSDLAG00005029200	ENSDLAG00005031545
Large yellow croaker	MODERN SPECIES	481	ENSLCRG00005010128	ENSLCRG00005010127	cnga1a (ENSLCRG00005010125)	ENSLCRG00005010124	ADRA1D (ENSLCRG00005010123)	LRRTM1 (ENSLCRG00005010122)	ctnna2 (ENSLCRG00005009175)	cisd2 (ENSLCRG00005009143)	suclg1 (ENSLCRG00005009107)	cisd2 (ENSLCRG00005009102)	ENSLCRG00005008969	bdh2 (ENSLCRG00005008955)	TACR3 (ENSLCRG00005008938)	ENSLCRG00005008937	mettl14 (ENSLCRG00005008932) #21	PRSS12 (ENSLCRG00005008922) #22	ENSLCRG00005008898 #28	ugt8 (ENSLCRG00005008894) #29	spock3 (ENSLCRG00005008890)	spock3 (ENSLCRG00005008886)	SLC44A1 (ENSLCRG00005008681)	DLC1 (ENSLCRG00005008299)	ENSLCRG00005008285	ENSLCRG00005008280	ENSLCRG00005008277	doc2d (ENSLCRG00005008275)	serping1 (ENSLCRG00005008270)	tmem134 (ENSLCRG00005008265)	aip (ENSLCRG00005008260)	cdk2ap2 (ENSLCRG00005008253)	GPR83 (ENSLCRG00005008247)
Gilthead seabream	MODERN SPECIES		cnga1a (ENSSAUG00010017915)	TACR3 (ENSSAUG00010017918)	bdh2 (ENSSAUG00010017950)	ENSSAUG00010017960	cisd2 (ENSSAUG00010017977)	suclg1 (ENSSAUG00010017983)	ENSSAUG00010017999	ctnna2 (ENSSAUG00010018035)	ENSSAUG00010018861	ENSSAUG00010018862	ADRA1D (ENSSAUG00010018863)	ENSSAUG00010018864	ENSSAUG00010018869	ENSSAUG00010018874	mettl14 (ENSSAUG00010018877) #21	PRSS12 (ENSSAUG00010018882) #22	NDST4 (ENSSAUG00010018887) #28	ugt8 (ENSSAUG00010018916) #29	spock3 (ENSSAUG00010018917)	SLC44A1 (ENSSAUG00010018918)	DLC1 (ENSSAUG00010018938)	ENSSAUG00010018949	ENSSAUG00010018950	doc2d (ENSSAUG00010018953)	serping1 (ENSSAUG00010018956)	tmem134 (ENSSAUG00010018962)	aip (ENSSAUG00010018966)	cdk2ap2 (ENSSAUG00010018970)	GPR83 (ENSSAUG00010018974)	ankrd49 (ENSSAUG00010018976)	ENSSAUG00010018978
Tetraodontidae	ANCESTRAL SPECIES	40								ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000166330	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A	ENSGT00940000156393.a.b	ENSGT00940000156979
Fugu	MODERN SPECIES	8	ENSTRUG00000027425	ENSTRUG00000032245	ENSTRUG00000031293	ENSTRUG00000023192	ENSTRUG00000032775	ENSTRUG00000033430	LRRTM1 (ENSTRUG00000004494)	ENSTRUG00000020187	ctnna2 (ENSTRUG00000002863)	ENSTRUG00000031420	ADRA1D (ENSTRUG00000002804)	ENSTRUG00000004059	ENSTRUG00000032089	ENSTRUG00000026317	mettl14 (ENSTRUG00000000401) #21	PRSS12 (ENSTRUG00000000348) #22	NDST4 (ENSTRUG00000000320) #28	ENSTRUG00000033419	ugt8 (ENSTRUG00000031541) #29	spock3 (ENSTRUG00000032115)	DLC1 (ENSTRUG00000005140)	ENSTRUG00000004874	CABP2 (ENSTRUG00000004846)	doc2d (ENSTRUG00000004693)	aip (ENSTRUG00000004014)	cdk2ap2 (ENSTRUG00000030905)	ENSTRUG00000003697	GPR83 (ENSTRUG00000003044)	ENSTRUG00000026164	ankrd49 (ENSTRUG00000027461)	ENSTRUG00000005602
Tetraodon	MODERN SPECIES	26	ENSTNIG00000003745	ENSTNIG00000000531	si:cabz01090165.1 (ENSTNIG00000003744)	ENSTNIG00000003743	ENSTNIG00000003740	ENSTNIG00000000118	hells (ENSTNIG00000003738)	CALHM3 (ENSTNIG00000003737)	ENSTNIG00000003736	MYH9 (ENSTNIG00000003735)	ENSTNIG00000003734	WAS (ENSTNIG00000003727)	SLC38A5 (ENSTNIG00000003726)	apex2 (ENSTNIG00000003725)	rad23aa (ENSTNIG00000003723)	ENSTNIG00000003720 #22	ENSTNIG00000003718 #28	ENSTNIG00000003717	ENSTNIG00000003716	ENSTNIG00000003698	MSANTD2 (ENSTNIG00000003697)	supt16h (ENSTNIG00000003692)	tox4b (ENSTNIG00000003691)	SLC12A6 (ENSTNIG00000003690)	nop10 (ENSTNIG00000000971)	lpcat4 (ENSTNIG00000003689)	emc4 (ENSTNIG00000003688)	ENSTNIG00000003687	ENSTNIG00000000936	ADCY4 (ENSTNIG00000003686)	ENSTNIG00000003685
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT01100000263492.b.b.b.a.b.a.a.b.b.d	ENSGT00940000160334	ENSGT00940000154336
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00400000023138	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT01100000263492.b.b.b.a.b.a.a.b.b.d	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Anabantoidei	ANCESTRAL SPECIES		ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00940000177216	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Climbing perch	MODERN SPECIES		scpp5 (ENSATEG00000017465)	cnga1a (ENSATEG00000017513)	TACR3 (ENSATEG00000017574)	bdh2 (ENSATEG00000017607)	SLC9B1 (ENSATEG00000017642)	cisd2 (ENSATEG00000017657)	suclg1 (ENSATEG00000017672)	ctnna2 (ENSATEG00000017691)	LRRTM1 (ENSATEG00000017745)	ENSATEG00000017749	ENSATEG00000017762	ENSATEG00000017785	ENSATEG00000025481	ENSATEG00000017813	mettl14 (ENSATEG00000017832) #21	ENSATEG00000017870 #22	ENSATEG00000017903 #28	ugt8 (ENSATEG00000017927) #29	spock3 (ENSATEG00000017945)	ENSATEG00000017967	ENSATEG00000018022	ENSATEG00000018111	ENSATEG00000018122	ENSATEG00000018160	doc2d (ENSATEG00000018216)	serping1 (ENSATEG00000018244)	ENSATEG00000018277	ENSATEG00000028481	ENSATEG00000018317	ENSATEG00000018334	ENSATEG00000029708
Siamese fighting fish	MODERN SPECIES		odam (ENSBSLG00000016616)	ENSBSLG00000016574	ENSBSLG00000016040	scpp5 (ENSBSLG00000016035)	cnga1a (ENSBSLG00000016015)	TACR3 (ENSBSLG00000015997)	bdh2 (ENSBSLG00000015992)	SLC9B2 (ENSBSLG00000015950)	cisd2 (ENSBSLG00000015941)	suclg1 (ENSBSLG00000015918)	ENSBSLG00000015913	ctnna2 (ENSBSLG00000015049)	ENSBSLG00000015024	ENSBSLG00000015020	mettl14 (ENSBSLG00000014933) #21	ENSBSLG00000014911 #22	ENSBSLG00000014859 #28	ugt8 (ENSBSLG00000014839) #29	spock3 (ENSBSLG00000014816)	SLC44A1 (ENSBSLG00000014605)	DLC1 (ENSBSLG00000013981)	ENSBSLG00000013933	ENSBSLG00000013918	doc2d (ENSBSLG00000013901)	serping1 (ENSBSLG00000013845)	tmem134 (ENSBSLG00000013830)	aip (ENSBSLG00000013814)	cdk2ap2 (ENSBSLG00000013806)	ENSBSLG00000013795	ENSBSLG00000013793	ankrd49 (ENSBSLG00000013789)
Zig-zag eel	MODERN SPECIES		ENSMAMG00000018444	scpp5 (ENSMAMG00000018457)	cnga1a (ENSMAMG00000018476)	TACR3 (ENSMAMG00000018492)	bdh2 (ENSMAMG00000018504)	ENSMAMG00000018544	cisd2 (ENSMAMG00000028273)	suclg1 (ENSMAMG00000018563)	ctnna2 (ENSMAMG00000018570)	LRRTM1 (ENSMAMG00000018584)	ENSMAMG00000018587	ENSMAMG00000028568	ENSMAMG00000018592	ENSMAMG00000018606	mettl14 (ENSMAMG00000018629) #21	ENSMAMG00000018662 #22	ENSMAMG00000018700 #28	ugt8 (ENSMAMG00000018719) #29	spock3 (ENSMAMG00000018735)	ENSMAMG00000018744	ENSMAMG00000018759	ENSMAMG00000018858	ENSMAMG00000018912	doc2d (ENSMAMG00000018968)	serping1 (ENSMAMG00000018978)	ENSMAMG00000019010	ENSMAMG00000019020	ENSMAMG00000027400	ENSMAMG00000028480	ENSMAMG00000019054	ENSMAMG00000027762
Carangaria	ANCESTRAL SPECIES		ENSGT01070000255175	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Pleuronectoidei	ANCESTRAL SPECIES	21	ENSGT00510000046787.e.a	ENSGT00400000023138	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT01030000234543.A.a	ENSGT00940000161705	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919	ENSGT00540000073610.A
Turbot	MODERN SPECIES	20	scpp5 (ENSSMAG00000008766)	cnga1a (ENSSMAG00000008736)	TACR3 (ENSSMAG00000035648)	bdh2 (ENSSMAG00000008674)	ENSSMAG00000008657	cisd2 (ENSSMAG00000032259)	SUCLG1 (ENSSMAG00000008628)	ENSSMAG00000008610	LRRTM1 (ENSSMAG00000009055)	ENSSMAG00000009082	ENSSMAG00000024371	ENSSMAG00000021740	ENSSMAG00000022575	ENSSMAG00000034718	mettl14 (ENSSMAG00000009127) #21	ENSSMAG00000009162 #22	ENSSMAG00000009213 #28	ugt8 (ENSSMAG00000009307) #29	spock3 (ENSSMAG00000009372)	ENSSMAG00000009405	ENSSMAG00000009448	ENSSMAG00000009537	ENSSMAG00000009562	doc2d (ENSSMAG00000009575)	serping1 (ENSSMAG00000009595)	ENSSMAG00000009611	ENSSMAG00000009628	ENSSMAG00000009641	ENSSMAG00000009656	ENSSMAG00000029468	ENSSMAG00000009675
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	19	ENSCSEG00000009518	odam (ENSCSEG00000009497)	ENSCSEG00000009491	scpp5 (ENSCSEG00000009482)	cnga1a (ENSCSEG00000009469)	TACR3 (ENSCSEG00000009462)	bdh2 (ENSCSEG00000009447)	ENSCSEG00000009405	cisd2 (ENSCSEG00000009437)	suclg1 (ENSCSEG00000009370)	LRRTM1 (ENSCSEG00000009356)	ctnna2 (ENSCSEG00000009286)	ADRA1D (ENSCSEG00000009270)	ENSCSEG00000009242	mettl14 (ENSCSEG00000009185) #21	PRSS12 (ENSCSEG00000009112) #22	ENSCSEG00000009097 #22	ENSCSEG00000009083 #28	ugt8 (ENSCSEG00000009068) #29	spock3 (ENSCSEG00000009038)	ENSCSEG00000009027	SLC44A1 (ENSCSEG00000008984)	DLC1 (ENSCSEG00000008933)	ENSCSEG00000008911	ENSCSEG00000008864	doc2d (ENSCSEG00000008834)	tmem134 (ENSCSEG00000008815)	cdk2ap2 (ENSCSEG00000008805)	aip (ENSCSEG00000008795)	GPR83 (ENSCSEG00000008789)	ankrd49 (ENSCSEG00000008786)
Tongue sole	MODERN SPECIES	19	odam (ENSCSEG00000009497)	ENSCSEG00000009491	scpp5 (ENSCSEG00000009482)	cnga1a (ENSCSEG00000009469)	TACR3 (ENSCSEG00000009462)	bdh2 (ENSCSEG00000009447)	ENSCSEG00000009405	cisd2 (ENSCSEG00000009437)	suclg1 (ENSCSEG00000009370)	LRRTM1 (ENSCSEG00000009356)	ctnna2 (ENSCSEG00000009286)	ADRA1D (ENSCSEG00000009270)	ENSCSEG00000009242	mettl14 (ENSCSEG00000009185) #21	PRSS12 (ENSCSEG00000009112) #22	ENSCSEG00000009097 #22	ENSCSEG00000009083 #28	ugt8 (ENSCSEG00000009068) #29	spock3 (ENSCSEG00000009038)	ENSCSEG00000009027	SLC44A1 (ENSCSEG00000008984)	DLC1 (ENSCSEG00000008933)	ENSCSEG00000008911	ENSCSEG00000008864	doc2d (ENSCSEG00000008834)	tmem134 (ENSCSEG00000008815)	cdk2ap2 (ENSCSEG00000008805)	aip (ENSCSEG00000008795)	GPR83 (ENSCSEG00000008789)	ankrd49 (ENSCSEG00000008786)	ubn2a (ENSCSEG00000008734)
Carangaria_A	ANCESTRAL SPECIES	14	ENSGT01070000255175	ENSGT00390000005736	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Barramundi perch	MODERN SPECIES	108	cnga1a (ENSLCAG00010002235)	TACR3 (ENSLCAG00010002224)	bdh2 (ENSLCAG00010002216)	ENSLCAG00010002211	cisd2 (ENSLCAG00010002204)	suclg1 (ENSLCAG00010002194)	LRRTM1 (ENSLCAG00010002183)	ctnna2 (ENSLCAG00010002082)	ADRA1D (ENSLCAG00010002021)	ENSLCAG00010002017	ENSLCAG00010002002	ENSLCAG00010002000	ENSLCAG00010001992	ENSLCAG00010001987	mettl14 (ENSLCAG00010001982) #21	PRSS12 (ENSLCAG00010001981) #22	ENSLCAG00010001971 #28	ugt8 (ENSLCAG00010001962) #29	spock3 (ENSLCAG00010001958)	SLC44A1 (ENSLCAG00010001947)	DLC1 (ENSLCAG00010001936)	ENSLCAG00010001933	ENSLCAG00010001903	doc2d (ENSLCAG00010001889)	serping1 (ENSLCAG00010001877)	tmem134 (ENSLCAG00010001871)	aip (ENSLCAG00010001863)	cdk2ap2 (ENSLCAG00010001859)	GPR83 (ENSLCAG00010001855)	ankrd49 (ENSLCAG00010001851)	ENSLCAG00010001850
Seriola	ANCESTRAL SPECIES	29	ENSGT00940000156074.a.b	ENSGT00940000153745.b.e.b	ENSGT00940000156721	ENSGT00390000013285.g	ENSGT00940000156660	ENSGT00940000156351	ENSGT00940000161705	ENSGT01030000234543.A.a	ENSGT00940000160795	ENSGT00950000182934.a.a	ENSGT00940000177159.c.a.a.a	ENSGT00940000172773	ENSGT00940000177159.c.a.b	ENSGT00940000177159.c.a.a.b	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828.bb	ENSGT00940000157174.c	ENSGT00940000173544	ENSGT00950000183061.a.a.a.a.a.a.b	ENSGT00440000033329.a.a.b	ENSGT00940000159796.a.a	ENSGT00940000166345	ENSGT00940000159681	ENSGT00390000011766	ENSGT00390000001289.a	ENSGT00940000160334	ENSGT00940000154336	ENSGT00390000003919
Yellowtail amberjack	MODERN SPECIES	2974	TACR3 (ENSSLDG00000004685)	ENSSLDG00000004661	bdh2 (ENSSLDG00000004615)	ENSSLDG00000004586	cisd2 (ENSSLDG00000004561)	suclg1 (ENSSLDG00000004481)	LRRTM1 (ENSSLDG00000004459)	ctnna2 (ENSSLDG00000004360)	ADRA1D (ENSSLDG00000004332)	ENSSLDG00000004314	ENSSLDG00000004305	ENSSLDG00000004285	ENSSLDG00000004267	ENSSLDG00000004243	mettl14 (ENSSLDG00000004181) #21	PRSS12 (ENSSLDG00000004115) #22	ENSSLDG00000004076	ENSSLDG00000003978 #28	ugt8 (ENSSLDG00000003939) #29	spock3 (ENSSLDG00000003911)	SLC44A1 (ENSSLDG00000003838)	ENSSLDG00000003807	DLC1 (ENSSLDG00000003703)	LONRF1 (ENSSLDG00000003645)	ENSSLDG00000003609	ENSSLDG00000003590	ENSSLDG00000003566	serping1 (ENSSLDG00000003519)	tmem134 (ENSSLDG00000003494)	aip (ENSSLDG00000003465)	cdk2ap2 (ENSSLDG00000003447)
Greater amberjack	MODERN SPECIES	101	cnga1a (ENSSDUG00000001877)	TACR3 (ENSSDUG00000001040)	bdh2 (ENSSDUG00000000922)	ENSSDUG00000000910	cisd2 (ENSSDUG00000000891)	suclg1 (ENSSDUG00000000852)	LRRTM1 (ENSSDUG00000000842)	ctnna2 (ENSSDUG00000000813)	ADRA1D (ENSSDUG00000000779)	ENSSDUG00000000767	ENSSDUG00000000739	ENSSDUG00000000728	ENSSDUG00000000720	ENSSDUG00000000699	mettl14 (ENSSDUG00000000688) #21	PRSS12 (ENSSDUG00000000645) #22	ENSSDUG00000000591 #28	ugt8 (ENSSDUG00000000562) #29	spock3 (ENSSDUG00000000546)	SLC44A1 (ENSSDUG00000000443)	DLC1 (ENSSDUG00000000411)	ENSSDUG00000000395	ENSSDUG00000000372	doc2d (ENSSDUG00000000318)	serping1 (ENSSDUG00000000275)	tmem134 (ENSSDUG00000000262)	aip (ENSSDUG00000000221)	cdk2ap2 (ENSSDUG00000000209)	GPR83 (ENSSDUG00000000202)	ankrd49 (ENSSDUG00000000192)	ENSSDUG00000000152
Pinecone sodierfish	MODERN SPECIES		bdh2 (ENSMMDG00005000449)	ENSMMDG00005000470	cisd2 (ENSMMDG00005000504)	suclg1 (ENSMMDG00005000516)	ENSMMDG00005000563	ENSMMDG00005000568	ctnna2 (ENSMMDG00005000625)	LRRTM1 (ENSMMDG00005000996)	CTNNA2 (ENSMMDG00005001000)	ADRA1D (ENSMMDG00005001002)	ENSMMDG00005001005	ENSMMDG00005001009	ENSMMDG00005001013	ENSMMDG00005001016	mettl14 (ENSMMDG00005001021) #21	PRSS12 (ENSMMDG00005001027) #22	NDST4 (ENSMMDG00005001034) #28	ugt8 (ENSMMDG00005001077) #29	spock3 (ENSMMDG00005001078)	SLC44A1 (ENSMMDG00005001082)	ENSMMDG00005001087	DLC1 (ENSMMDG00005001092)	ENSMMDG00005001398	ENSMMDG00005001412	doc2d (ENSMMDG00005001416)	serping1 (ENSMMDG00005001425)	tmem134 (ENSMMDG00005001434)	aip (ENSMMDG00005001446)	cdk2ap2 (ENSMMDG00005001450)	GPR83 (ENSMMDG00005001454)	ankrd49 (ENSMMDG00005001457)
Cod	DUPLICATION
Cod	MODERN SPECIES	16	bdh2 (ENSGMOG00000009338)	ENSGMOG00000009344	cisd2 (ENSGMOG00000009357)	ENSGMOG00000030120	ctnna2 (ENSGMOG00000019375)	ENSGMOG00000007136	ENSGMOG00000020001	ENSGMOG00000020002	ENSGMOG00000025176	ENSGMOG00000024829	ENSGMOG00000028689	ENSGMOG00000031421	ENSGMOG00000023813	mettl14 (ENSGMOG00000003923) #21	ENSGMOG00000003953 #22	ENSGMOG00000035505 #22	ENSGMOG00000014106 #28	ugt8 (ENSGMOG00000003398) #29	spock3 (ENSGMOG00000003415)	ENSGMOG00000003443	ENSGMOG00000033853	ENSGMOG00000002063	ENSGMOG00000002101	ENSGMOG00000022364	doc2d (ENSGMOG00000003329)	serping1 (ENSGMOG00000013214)	ENSGMOG00000013221	ENSGMOG00000013226	ENSGMOG00000013238	ENSGMOG00000018303	ENSGMOG00000031164
Cod	MODERN SPECIES	16	ENSGMOG00000023792	bdh2 (ENSGMOG00000009338)	ENSGMOG00000009344	cisd2 (ENSGMOG00000009357)	ENSGMOG00000030120	ctnna2 (ENSGMOG00000019375)	ENSGMOG00000007136	ENSGMOG00000020001	ENSGMOG00000020002	ENSGMOG00000025176	ENSGMOG00000024829	ENSGMOG00000028689	ENSGMOG00000031421	ENSGMOG00000023813	mettl14 (ENSGMOG00000003923) #21	ENSGMOG00000003953 #22	ENSGMOG00000035505 #22	ENSGMOG00000014106 #28	ugt8 (ENSGMOG00000003398) #29	spock3 (ENSGMOG00000003415)	ENSGMOG00000003443	ENSGMOG00000033853	ENSGMOG00000002063	ENSGMOG00000002101	ENSGMOG00000022364	doc2d (ENSGMOG00000003329)	serping1 (ENSGMOG00000013214)	ENSGMOG00000013221	ENSGMOG00000013226	ENSGMOG00000013238	ENSGMOG00000018303
Osteoglossiformes	ANCESTRAL SPECIES	145	ENSGT00940000154372.a.a.b	ENSGT00530000063586.b.c.a	ENSGT00390000010628.a	ENSGT00390000005639.a.a.k	ENSGT00390000000470	ENSGT00850000132319.a.a.b	ENSGT00530000063255.B	ENSGT00390000006192	ENSGT00390000013015	ENSGT00530000063669.a	ENSGT00390000001577	ENSGT00940000154965.B	ENSGT00940000162414.a	ENSGT00940000158402	ENSGT00550000075003 #21	ENSGT00940000158131 #22	ENSGT00940000157168 #28	ENSGT00940000156545 #29	ENSGT00940000157828	ENSGT00940000157225	ENSGT00940000157158	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000013749	ENSGT01030000234803	ENSGT00940000159346	ENSGT00390000004179	ENSGT00940000161766	ENSGT00940000160268	ENSGT00390000004697	ENSGT00940000156495.p
Asian bonytongue	MODERN SPECIES	7	ANXA5 (ENSSFOG00015012934)	ENSSFOG00015025553	fgfbp2b (ENSSFOG00015025776)	prom1b (ENSSFOG00015013078)	tapt1b (ENSSFOG00015013331)	LDB2 (ENSSFOG00015028235)	qdprb.4 (ENSSFOG00015013456)	lap3 (ENSSFOG00015013505)	med28 (ENSSFOG00015013534)	ENSSFOG00015025280	ENSSFOG00015013567	ncapg (ENSSFOG00015013585)	ENSSFOG00015030965	slit2 (ENSSFOG00015013660)	mettl14 (ENSSFOG00015013743) #21	PRSS12 (ENSSFOG00015013772) #22	NDST4 (ENSSFOG00015013821) #28	ugt8 (ENSSFOG00015013892) #29	spock3 (ENSSFOG00015013915)	tll1 (ENSSFOG00015013977)	cpe (ENSSFOG00015014025)	msmo1 (ENSSFOG00015014052)	KLHL2 (ENSSFOG00015014079)	tmem192 (ENSSFOG00015014136)	ENSSFOG00015014154	ENSSFOG00015014163	MARCHF1 (ENSSFOG00015025804)	tma16 (ENSSFOG00015014181)	NPY5R (ENSSFOG00015014190)	npy1r (ENSSFOG00015014195)	NAF1 (ENSSFOG00015014207)
P. kingsleyae	MODERN SPECIES	6	tapt1b (ENSPKIG00000022626)	LDB2 (ENSPKIG00000022532)	qdprb.4 (ENSPKIG00000022475)	clrn2 (ENSPKIG00000022458)	lap3 (ENSPKIG00000022415)	med28 (ENSPKIG00000022383)	ENSPKIG00000022358	fam184b (ENSPKIG00000022319)	ncapg (ENSPKIG00000022276)	ENSPKIG00000022260	ENSPKIG00000022243	ENSPKIG00000022230	ENSPKIG00000022216	slit2 (ENSPKIG00000021961)	mettl14 (ENSPKIG00000021821) #21	PRSS12 (ENSPKIG00000021778) #22	NDST4 (ENSPKIG00000021707) #28	ugt8 (ENSPKIG00000021657) #29	spock3 (ENSPKIG00000021579)	tll1 (ENSPKIG00000020645)	cpe (ENSPKIG00000020014)	msmo1 (ENSPKIG00000019967)	KLHL2 (ENSPKIG00000019885)	tmem192 (ENSPKIG00000019831)	ENSPKIG00000019815	ENSPKIG00000019806	MARCHF1 (ENSPKIG00000019778)	tma16 (ENSPKIG00000019747)	NPY5R (ENSPKIG00000019730)	npy1r (ENSPKIG00000019716)	NAF1 (ENSPKIG00000019687)
Spotted gar	MODERN SPECIES	670	anxa5b (ENSLOCG00000003034)	FGFBP1 (ENSLOCG00000018180)	fgfbp2b (ENSLOCG00000018182)	prom1b (ENSLOCG00000003057)	tapt1b (ENSLOCG00000003138)	ldb2a (ENSLOCG00000003158)	qdprb.4 (ENSLOCG00000003181)	clrn2 (ENSLOCG00000003202)	lap3 (ENSLOCG00000003221)	med28 (ENSLOCG00000003244)	HASPIN (ENSLOCG00000003251)	fam184b (ENSLOCG00000003271)	ncapg (ENSLOCG00000003287)	ENSLOCG00000003324	slit2 (ENSLOCG00000003341)	PRSS12 (ENSLOCG00000003365) #22	mettl14 (ENSLOCG00000003385) #21	NDST4 (ENSLOCG00000003401) #28	ENSLOCG00000003421	ENSLOCG00000003426	ugt8 (ENSLOCG00000003443) #29	ANXA10 (ENSLOCG00000003457)	spock3 (ENSLOCG00000003489)	tll1 (ENSLOCG00000003509)	lima1a (ENSLOCG00000003551)	ENSLOCG00000003574	ENSLOCG00000003584	kansl2 (ENSLOCG00000003604)	sarnp (ENSLOCG00000003621)	gdf11 (ENSLOCG00000003644)	ccnt1 (ENSLOCG00000003660)
Reedfish	MODERN SPECIES	15	tpm2 (ENSECRG00000006754)	zgc:114200 (ENSECRG00000006786)	ENSECRG00000006801	MLANA (ENSECRG00000006826)	ENSECRG00000006837	ENSECRG00000006850	gldc (ENSECRG00000006880)	oaz1b (ENSECRG00000006935)	mboat4 (ENSECRG00000007091)	PRAG1 (ENSECRG00000007098)	ENSECRG00000007110	CLDN23 (ENSECRG00000007115)	ENSECRG00000007141	sec24d (ENSECRG00000007231) #20	mettl14 (ENSECRG00000007257) #21	PRSS12 (ENSECRG00000007300) #22	NDST4 (ENSECRG00000007335) #28	ENSECRG00000007345	ugt8 (ENSECRG00000007352) #29	ANXA10 (ENSECRG00000007368)	ENSECRG00000007377	spock3 (ENSECRG00000007391)	tll1 (ENSECRG00000007443)	cpe (ENSECRG00000007638)	msmo1 (ENSECRG00000007681)	KLHL2 (ENSECRG00000007705)	tmem192 (ENSECRG00000007733)	ENSECRG00000007739	SMIM31 (ENSECRG00000007749)	MARCHF1 (ENSECRG00000007762)	ENSECRG00000007781
Elephant shark	MODERN SPECIES	1504	ENSCMIG00000003121	ENSCMIG00000003128	ENSCMIG00000003133 #8	ndnf (ENSCMIG00000003136) #9	prdm5 (ENSCMIG00000003138) #10	mad2l1 (ENSCMIG00000003142) #12	pde5ab (ENSCMIG00000003211) #13	fabp2 (ENSCMIG00000003354) #15	ENSCMIG00000003387	ENSCMIG00000003396 #17	ENSCMIG00000003409 #17	MYOZ2 (ENSCMIG00000003419) #18	SYNPO2 (ENSCMIG00000003433) #19	sec24d (ENSCMIG00000003706) #20	mettl14 (ENSCMIG00000004391) #21	PRSS12 (ENSCMIG00000004417) #22	NDST4 (ENSCMIG00000004506) #28	ENSCMIG00000004584	ENSCMIG00000004612	FBXO41 (ENSCMIG00000004622)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000158131 #22
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	465																ENSEBUG00000006857 #22	DAPP1 (ENSEBUG00000009886)	ENSEBUG00000010604	ENSEBUG00000010800	ENSEBUG00000008091	dcun1d2a (ENSEBUG00000015331)	TMCO3 (ENSEBUG00000013828)	ENSEBUG00000017065
Hagfish	MODERN SPECIES	784				ENSEBUG00000010823	ENSEBUG00000006093	ENSEBUG00000014563	ENSEBUG00000012354	abhd13 (ENSEBUG00000014577)	ENSEBUG00000000441	ENSEBUG00000009098	KLHL10 (ENSEBUG00000004604)	ENSEBUG00000007847	ENSEBUG00000015946	ENSEBUG00000014663	ENSEBUG00000010014	ENSEBUG00000016807 #22	ENSEBUG00000007130