Mus_A	ANCESTRAL SPECIES	14	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00860000136215	ENSGT00940000159721	ENSGT00940000162618	ENSGT00940000155305	ENSGT00940000155123.b	ENSGT00940000156667	ENSGT00940000154170.A	ENSGT00390000004454	ENSGT00950000182940.b.b	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #18	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026.c #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00900000143364	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #34	ENSGT00390000003122.c.b #35	ENSGT00390000003122.c.a ##35
Mus_B	ANCESTRAL SPECIES	13	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00860000136215	ENSGT00940000159721	ENSGT00940000162618	ENSGT00940000155305	ENSGT00940000155123.b	ENSGT00940000156667	ENSGT00940000154170.A	ENSGT00390000004454	ENSGT00950000182940.b.b	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #18	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026.c #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00900000143364	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #34	ENSGT00390000003122.c.b #35	ENSGT00390000003122.c.a ##35
Mus_C	ANCESTRAL SPECIES	10	ENSGT00390000018706.m.a	ENSGT00510000048902.a	ENSGT00860000136215	ENSGT00940000159721	ENSGT00940000162618	ENSGT00940000155305	ENSGT00940000155123.b	ENSGT00940000156667	ENSGT00940000154170.A	ENSGT00390000004454	ENSGT00950000182940.b.b	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #18	ENSGT01050000244840.A.a.b #20	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #23	ENSGT00730000111121 #24	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026.c #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00900000143364	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #34	ENSGT00390000003122.c.b #35	ENSGT00390000003122.c.a.a ##35
Steppe mouse	MODERN SPECIES	3412												Iqgap2 (ENSMSIG00000011044) #18	F2rl2 (ENSMSIG00000011060) #19	F2r (ENSMSIG00000011072) #20	F2rl1 (ENSMSIG00000011086) #21	S100z (ENSMSIG00000011096) #22	Crhbp (ENSMSIG00000011120) #23	Aggf1 (ENSMSIG00000011146) #24	ENSMSIG00000011178 #25	Pde8b (ENSMSIG00000011209) #26	ENSMSIG00000011421 #27	Otp (ENSMSIG00000011481) #28	ENSMSIG00000011491 #29	Ap3b1 (ENSMSIG00000011521) #30	Scamp1 (ENSMSIG00000011596) #31	Lhfpl2 (ENSMSIG00000011618) #32	Arsb (ENSMSIG00000011652) #33	Dmgdh (ENSMSIG00000011670) #34	Bhmt2 (ENSMSIG00000011736) #35	ENSMSIG00000011793 #36	Jmy (ENSMSIG00000011806) #37
spretus	MODERN SPECIES	4	MGP_SPRETEiJ_G0019695	Fam169a (MGP_SPRETEiJ_G0019694)	1700029F12Rik (MGP_SPRETEiJ_G0019693)	Gcnt4 (MGP_SPRETEiJ_G0019692)	Hmgcr (MGP_SPRETEiJ_G0019691)	Cert1 (MGP_SPRETEiJ_G0019690)	MGP_SPRETEiJ_G0019689	Polk (MGP_SPRETEiJ_G0019688)	Ankdd1b (MGP_SPRETEiJ_G0019687)	Poc5 (MGP_SPRETEiJ_G0019686)	Sv2c (MGP_SPRETEiJ_G0019685)	F2rl2 (MGP_SPRETEiJ_G0019684) #19	Iqgap2 (MGP_SPRETEiJ_G0019683) #18	F2r (MGP_SPRETEiJ_G0019682) #20	F2rl1 (MGP_SPRETEiJ_G0019681) #21	S100z (MGP_SPRETEiJ_G0019680) #22	Crhbp (MGP_SPRETEiJ_G0019679) #23	Aggf1 (MGP_SPRETEiJ_G0019678) #24	Zbed3 (MGP_SPRETEiJ_G0019677) #25	Pde8b (MGP_SPRETEiJ_G0019676) #26	MGP_SPRETEiJ_G0019675 #27	Otp (MGP_SPRETEiJ_G0019674) #28	Tbca (MGP_SPRETEiJ_G0019673) #29	Ap3b1 (MGP_SPRETEiJ_G0019672) #30	MGP_SPRETEiJ_G0019671	Scamp1 (MGP_SPRETEiJ_G0019670) #31	Lhfpl2 (MGP_SPRETEiJ_G0019669) #32	Arsb (MGP_SPRETEiJ_G0019668) #33	Dmgdh (MGP_SPRETEiJ_G0019667) #34	Bhmt2 (MGP_SPRETEiJ_G0019666) #35	MGP_SPRETEiJ_G0019665 ##35
Mouse	MODERN SPECIES	4	Fam169a (ENSMUSG00000041817)	1700029F12Rik (ENSMUSG00000052075)	Gcnt4 (ENSMUSG00000091387)	Ankrd31 (ENSMUSG00000109561)	Hmgcr (ENSMUSG00000021670)	Cert1 (ENSMUSG00000021669)	Polk (ENSMUSG00000021668)	Ankdd1b (ENSMUSG00000047117)	Poc5 (ENSMUSG00000021671)	Btf3l4b (ENSMUSG00000114133)	Sv2c (ENSMUSG00000051111)	F2rl2 (ENSMUSG00000021675) #19	Iqgap2 (ENSMUSG00000021676) #18	F2r (ENSMUSG00000048376) #20	F2rl1 (ENSMUSG00000021678) #21	S100z (ENSMUSG00000021679) #22	Crhbp (ENSMUSG00000021680) #23	Aggf1 (ENSMUSG00000021681) #24	Zbed3 (ENSMUSG00000041995) #25	Pde8b (ENSMUSG00000021684) #26	Wdr41 (ENSMUSG00000042015) ##27	Otp (ENSMUSG00000021685) #28	Tbca (ENSMUSG00000042043) #29	Ap3b1 (ENSMUSG00000021686) #30	Scamp1 (ENSMUSG00000021687) #31	Lhfpl2 (ENSMUSG00000045312) #32	Arsb (ENSMUSG00000042082) #33	Dmgdh (ENSMUSG00000042102) #34	Bhmt2 (ENSMUSG00000042118) #35	Bhmt (ENSMUSG00000074768) ##35	Jmy (ENSMUSG00000021690) #37
Ryukyu mouse	MODERN SPECIES	4	Fam169a (MGP_CAROLIEiJ_G0018812)	1700029F12Rik (MGP_CAROLIEiJ_G0018811)	Gcnt4 (MGP_CAROLIEiJ_G0018810)	MGP_CAROLIEiJ_G0018809	Hmgcr (MGP_CAROLIEiJ_G0018808)	Cert1 (MGP_CAROLIEiJ_G0018807)	MGP_CAROLIEiJ_G0018806	Polk (MGP_CAROLIEiJ_G0018805)	Ankdd1b (MGP_CAROLIEiJ_G0018804)	Poc5 (MGP_CAROLIEiJ_G0018803)	Sv2c (MGP_CAROLIEiJ_G0018802)	F2rl2 (MGP_CAROLIEiJ_G0018801) #19	Iqgap2 (MGP_CAROLIEiJ_G0018800) #18	F2r (MGP_CAROLIEiJ_G0018799) #20	F2rl1 (MGP_CAROLIEiJ_G0018798) #21	S100z (MGP_CAROLIEiJ_G0018797) #22	Crhbp (MGP_CAROLIEiJ_G0018796) #23	Aggf1 (MGP_CAROLIEiJ_G0018795) #24	Zbed3 (MGP_CAROLIEiJ_G0018794) #25	Pde8b (MGP_CAROLIEiJ_G0018793) #26	MGP_CAROLIEiJ_G0018792 #27	Otp (MGP_CAROLIEiJ_G0018791) #28	Tbca (MGP_CAROLIEiJ_G0018790) #29	Ap3b1 (MGP_CAROLIEiJ_G0018789) #30	MGP_CAROLIEiJ_G0018788	Scamp1 (MGP_CAROLIEiJ_G0018787) #31	Lhfpl2 (MGP_CAROLIEiJ_G0018786) #32	MGP_CAROLIEiJ_G0018785	Arsb (MGP_CAROLIEiJ_G0018784) #33	MGP_CAROLIEiJ_G0018783	Dmgdh (MGP_CAROLIEiJ_G0018782) #34