Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000154742.b	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT01050000246247	ENSGT00940000170540	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000154742.b	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00550000074890 #8	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Equus	ANCESTRAL SPECIES	6	ENSGT00550000074890 #8	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Horse	MODERN SPECIES	5	HEXB (ENSECAG00000011657) #7	GFM2 (ENSECAG00000006640) #8	NSA2 (ENSECAG00000005528) #9	FAM169A (ENSECAG00000024132) #10	GCNT4 (ENSECAG00000005515) #11	ANKRD31 (ENSECAG00000024123) #12	HMGCR (ENSECAG00000021330) #13	CERT1 (ENSECAG00000017349) #14	POLK (ENSECAG00000014876) #15	ANKDD1B (ENSECAG00000014521) #16	POC5 (ENSECAG00000013824) #17	SV2C (ENSECAG00000010569) #18	F2RL2 (ENSECAG00000010531) #19	IQGAP2 (ENSECAG00000004274) #20	F2RL1 (ENSECAG00000002867) #21	S100Z (ENSECAG00000000977) #22	F2R (ENSECAG00000004055) #23	CRHBP (ENSECAG00000017949) #24	ZBED3 (ENSECAG00000040464) #25	PDE8B (ENSECAG00000012189) #26	WDR41 (ENSECAG00000009496) #27	OTP (ENSECAG00000009423) #28	TBCA (ENSECAG00000009383) #29	AP3B1 (ENSECAG00000022849) #30	SCAMP1 (ENSECAG00000021921) #31	LHFPL2 (ENSECAG00000021890) #32	ARSB (ENSECAG00000020847) #33	BHMT2 (ENSECAG00000018440) #34	DMGDH (ENSECAG00000019851) #35	BHMT (ENSECAG00000015626) #36	ENSECAG00000052194 #37
Donkey	MODERN SPECIES	29	GFM2 (ENSEASG00005018285) #8	ENSEASG00005018414 #9	FAM169A (ENSEASG00005018417) #10	GCNT4 (ENSEASG00005037231) #11	ANKRD31 (ENSEASG00005018424) #12	HMGCR (ENSEASG00005018428) #13	CERT1 (ENSEASG00005018435) #14	POLK (ENSEASG00005018442) #15	ANKDD1B (ENSEASG00005035528) #16	POC5 (ENSEASG00005018452) #17	SV2C (ENSEASG00005018455) #18	F2RL2 (ENSEASG00005036850) #19	IQGAP2 (ENSEASG00005000244) #20	F2R (ENSEASG00005037330) #23	F2RL1 (ENSEASG00005001812) #21	S100Z (ENSEASG00005001816) #22	CRHBP (ENSEASG00005001822) #24	AGGF1 (ENSEASG00005001829)	ZBED3 (ENSEASG00005034455) #25	PDE8B (ENSEASG00005001845) #26	WDR41 (ENSEASG00005001862) #27	OTP (ENSEASG00005001863) #28	ENSEASG00005032921	ENSEASG00005028729 #29	AP3B1 (ENSEASG00005001889) #30	SCAMP1 (ENSEASG00005001900) #31	LHFPL2 (ENSEASG00005001904) #32	ARSB (ENSEASG00005001910) #33	DMGDH (ENSEASG00005001920) #35	BHMT2 (ENSEASG00005001941) #34	BHMT (ENSEASG00005001952) #36
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00550000074890 #8	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Microchiroptera	ANCESTRAL SPECIES																	ENSGT00940000161125 #22
Greater horseshoe bat	MODERN SPECIES	25	ENSRFEG00010012400 #9	FAM169A (ENSRFEG00010012573) #10	GCNT4 (ENSRFEG00010012676) #11	ANKRD31 (ENSRFEG00010012703) #12	HMGCR (ENSRFEG00010013017) #13	CERT1 (ENSRFEG00010013140) #14	POLK (ENSRFEG00010013650) #15	ANKDD1B (ENSRFEG00010013842) #16	POC5 (ENSRFEG00010014089) #17	SV2C (ENSRFEG00010014249) #18	IQGAP2 (ENSRFEG00010014371) #20	F2RL2 (ENSRFEG00010015786) #19	F2R (ENSRFEG00010015825) #23	F2RL1 (ENSRFEG00010015917) #21	CRHBP (ENSRFEG00010015859) #24	S100Z (ENSRFEG00010015950) #22	AGGF1 (ENSRFEG00010016035)	ZBED3 (ENSRFEG00010016086) #25	PDE8B (ENSRFEG00010016179) #26	WDR41 (ENSRFEG00010017690) #27	OTP (ENSRFEG00010017860) #28	TBCA (ENSRFEG00010017900) #29	AP3B1 (ENSRFEG00010018051) #30	ENSRFEG00010018153	ENSRFEG00010018181	SCAMP1 (ENSRFEG00010018228) #31	LHFPL2 (ENSRFEG00010018294) #32	ARSB (ENSRFEG00010018336) #33	DMGDH (ENSRFEG00010018532) #35	BHMT2 (ENSRFEG00010018710) #34	BHMT (ENSRFEG00010018771) #36
Megabat	MODERN SPECIES	259											SV2C (ENSPVAG00000009721) #18	IQGAP2 (ENSPVAG00000009723) #20	F2RL2 (ENSPVAG00000009726) #19	F2R (ENSPVAG00000009728) #23	F2RL1 (ENSPVAG00000009729) #21	S100Z (ENSPVAG00000009731) #22	CRHBP (ENSPVAG00000009732) #24	AGGF1 (ENSPVAG00000009733)
Carnivora	ANCESTRAL SPECIES	8	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000154742.b	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Felidae	ANCESTRAL SPECIES	6	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000154742.b	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00390000003115.j	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Panthera	ANCESTRAL SPECIES	6	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000154742.b	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00390000003115.j	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Tiger	MODERN SPECIES	134	ENSPTIG00000021404 #9	ENSPTIG00000005537	FAM169A (ENSPTIG00000020456) #10	GCNT4 (ENSPTIG00000005529) #11	ENSPTIG00000019989 #12	HMGCR (ENSPTIG00000018612) #13	CERT1 (ENSPTIG00000016589) #14	POLK (ENSPTIG00000014864) #15	ANKDD1B (ENSPTIG00000013441) #16	POC5 (ENSPTIG00000011856) #17	SV2C (ENSPTIG00000010098) #18	F2RL2 (ENSPTIG00000009666) #19	IQGAP2 (ENSPTIG00000021975) #20	F2R (ENSPTIG00000021894) #23	F2RL1 (ENSPTIG00000021859) #21	S100Z (ENSPTIG00000021832) #22	CRHBP (ENSPTIG00000021691) #24	AGGF1 (ENSPTIG00000021519)	PDE8B (ENSPTIG00000014747) #26	WDR41 (ENSPTIG00000011923) #27	OTP (ENSPTIG00000011169) #28	TBCA (ENSPTIG00000009506) #29	AP3B1 (ENSPTIG00000008485) #30	SCAMP1 (ENSPTIG00000007335) #31	LHFPL2 (ENSPTIG00000006957) #32	ARSB (ENSPTIG00000003156) #33	DMGDH (ENSPTIG00000021430) #35	BHMT2 (ENSPTIG00000020984) #34	BHMT (ENSPTIG00000020191) #36	JMY (ENSPTIG00000019858)	HOMER1 (ENSPTIG00000018119)
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000154742.b	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00390000003115.j	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00390000009443.j	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36
leopard	MODERN SPECIES	40	ENSPPRG00000004205	FAM169A (ENSPPRG00000005349) #10	GCNT4 (ENSPPRG00000017075) #11	ENSPPRG00000006600 #12	HMGCR (ENSPPRG00000008332) #13	CERT1 (ENSPPRG00000009941) #14	POLK (ENSPPRG00000012504) #15	ANKDD1B (ENSPPRG00000013528) #16	POC5 (ENSPPRG00000017915) #17	ENSPPRG00000021813	SV2C (ENSPPRG00000024498) #18	F2RL2 (ENSPPRG00000024088) #19	IQGAP2 (ENSPPRG00000001278) #20	F2R (ENSPPRG00000001748) #23	F2RL1 (ENSPPRG00000001778) #21	S100Z (ENSPPRG00000002129) #22	CRHBP (ENSPPRG00000002387) #24	AGGF1 (ENSPPRG00000004438)	ZBED3 (ENSPPRG00000017742) #25	PDE8B (ENSPPRG00000012726) #26	WDR41 (ENSPPRG00000015058) #27	OTP (ENSPPRG00000015334) #28	TBCA (ENSPPRG00000018237) #29	AP3B1 (ENSPPRG00000019993) #30	ENSPPRG00000020501	SCAMP1 (ENSPPRG00000000330) #31	LHFPL2 (ENSPPRG00000000681) #32	ENSPPRG00000000967	ARSB (ENSPPRG00000002867) #33	DMGDH (ENSPPRG00000002973) #35	BHMT2 (ENSPPRG00000003496) #34
lion	MODERN SPECIES		ENSPLOG00000002461	GCNT4 (ENSPLOG00000002455) #11	ENSPLOG00000002438 #12	ENSPLOG00000002411	HMGCR (ENSPLOG00000002361) #13	CERT1 (ENSPLOG00000002211) #14	POLK (ENSPLOG00000002076) #15	ANKDD1B (ENSPLOG00000002011) #16	POC5 (ENSPLOG00000001946) #17	ENSPLOG00000001913	SV2C (ENSPLOG00000001869) #18	F2RL2 (ENSPLOG00000001850) #19	IQGAP2 (ENSPLOG00000001777) #20	F2R (ENSPLOG00000001727) #23	F2RL1 (ENSPLOG00000001714) #21	S100Z (ENSPLOG00000001701) #22	CRHBP (ENSPLOG00000001686) #24	AGGF1 (ENSPLOG00000001638)	ZBED3 (ENSPLOG00000001610) #25	PDE8B (ENSPLOG00000001335) #26	WDR41 (ENSPLOG00000001110) #27	OTP (ENSPLOG00000001071) #28	TBCA (ENSPLOG00000001046) #29	AP3B1 (ENSPLOG00000000902) #30	SCAMP1 (ENSPLOG00000000849) #31	LHFPL2 (ENSPLOG00000000832) #32	ENSPLOG00000000818	ARSB (ENSPLOG00000000803) #33	DMGDH (ENSPLOG00000000773) #35	BHMT2 (ENSPLOG00000000718) #34	BHMT (ENSPLOG00000000665) #36
Cat	MODERN SPECIES		GFM2 (ENSFCAG00000011977) #8	ENSFCAG00000011978 #9	FAM169A (ENSFCAG00000031781) #10	GCNT4 (ENSFCAG00000010125) #11	ENSFCAG00000029332 #12	HMGCR (ENSFCAG00000000007) #13	CERT1 (ENSFCAG00000031307) #14	POLK (ENSFCAG00000001614) #15	ANKDD1B (ENSFCAG00000009659) #16	POC5 (ENSFCAG00000009661) #17	ENSFCAG00000048312	SV2C (ENSFCAG00000003321) #18	IQGAP2 (ENSFCAG00000003323) #20	F2RL2 (ENSFCAG00000040850) #19	F2R (ENSFCAG00000003325) #23	S100Z (ENSFCAG00000044986) #22	CRHBP (ENSFCAG00000023090) #24	AGGF1 (ENSFCAG00000018724)	ZBED3 (ENSFCAG00000044339) #25	PDE8B (ENSFCAG00000005432) #26	WDR41 (ENSFCAG00000026146) #27	OTP (ENSFCAG00000032267) #28	TBCA (ENSFCAG00000026107) #29	AP3B1 (ENSFCAG00000030762) #30	SCAMP1 (ENSFCAG00000007805) #31	ARSB (ENSFCAG00000033754) #33	ENSFCAG00000035649	DMGDH (ENSFCAG00000011882) #35	BHMT (ENSFCAG00000040239) #36	JMY (ENSFCAG00000025959)	HOMER1 (ENSFCAG00000015755)
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00550000074890 #8	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT01050000246247	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36
Suina	ANCESTRAL SPECIES	11	ENSGT00550000074890 #8	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026.f #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT01050000246247	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36
Pig	MODERN SPECIES	10	GCNT4 (ENSSSCG00000029710) #11	ENSSSCG00000014078	ANKRD31 (ENSSSCG00000014079) #12	HMGCR (ENSSSCG00000014080) #13	CERT1 (ENSSSCG00000014081) #14	ENSSSCG00000058855	POLK (ENSSSCG00000014082) #15	ANKDD1B (ENSSSCG00000014083) #16	POC5 (ENSSSCG00000014084) #17	SV2C (ENSSSCG00000034062) #18	IQGAP2 (ENSSSCG00000014088) #20	ENSSSCG00000045040	F2RL2 (ENSSSCG00000037582) #19	F2R (ENSSSCG00000035355) #23	F2RL1 (ENSSSCG00000014091) #21	S100Z (ENSSSCG00000014092) #22	CRHBP (ENSSSCG00000014093) #24	AGGF1 (ENSSSCG00000014094)	ENSSSCG00000050058	PDE8B (ENSSSCG00000014097) #26	ENSSSCG00000014096	ENSSSCG00000051837 #27	ENSSSCG00000014098 #27	OTP (ENSSSCG00000014099) #28	TBCA (ENSSSCG00000014100) #29	ENSSSCG00000034241	AP3B1 (ENSSSCG00000014101) #30	SCAMP1 (ENSSSCG00000034795) #31	LHFPL2 (ENSSSCG00000028536) #32	ARSB (ENSSSCG00000038535) #33	DMGDH (ENSSSCG00000014110) #35
Chacoan peccary	MODERN SPECIES	204						HMGCR (ENSCWAG00000003368) #13	CERT1 (ENSCWAG00000003403) #14	POLK (ENSCWAG00000003477) #15	ANKDD1B (ENSCWAG00000003540) #16	POC5 (ENSCWAG00000003563) #17	SV2C (ENSCWAG00000003605) #18	IQGAP2 (ENSCWAG00000003644) #20	F2RL2 (ENSCWAG00000007970) #19	F2R (ENSCWAG00000008004) #23	F2RL1 (ENSCWAG00000008039) #21	ENSCWAG00000008077 #22	CRHBP (ENSCWAG00000008117) #24	AGGF1 (ENSCWAG00000008243)	ZBED3 (ENSCWAG00000008305) #25	PDE8B (ENSCWAG00000008441) #26	WDR41 (ENSCWAG00000010043) #27	OTP (ENSCWAG00000010193) #28	TBCA (ENSCWAG00000010250) #29	AP3B1 (ENSCWAG00000010356) #30	SCAMP1 (ENSCWAG00000010485) #31	LHFPL2 (ENSCWAG00000010566) #32	ARSB (ENSCWAG00000010599) #33	DMGDH (ENSCWAG00000010632) #35	BHMT2 (ENSCWAG00000010749) #34	BHMT (ENSCWAG00000010882) #36	JMY (ENSCWAG00000010992)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00550000074890 #8	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Camelidae	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a #9	ENSGT00390000018706.n ##9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Alpaca	MODERN SPECIES	5935															F2RL1 (ENSVPAG00000001070) #21	ENSVPAG00000001069 #22
Arabian camel	MODERN SPECIES	22	ENSCDRG00005002639 ##9	FAM169A (ENSCDRG00005002601) #10	ENSCDRG00005002592	GCNT4 (ENSCDRG00005002583) #11	ANKRD31 (ENSCDRG00005002546) #12	HMGCR (ENSCDRG00005002491) #13	CERT1 (ENSCDRG00005001455) #14	POLK (ENSCDRG00005001206) #15	ANKDD1B (ENSCDRG00005001160) #16	POC5 (ENSCDRG00005001127) #17	SV2C (ENSCDRG00005001113) #18	F2RL2 (ENSCDRG00005001095) #19	IQGAP2 (ENSCDRG00005000766) #20	F2R (ENSCDRG00005000707) #23	F2RL1 (ENSCDRG00005000688) #21	S100Z (ENSCDRG00005000678) #22	ENSCDRG00005000661	CRHBP (ENSCDRG00005000645) #24	AGGF1 (ENSCDRG00005000618)	ZBED3 (ENSCDRG00005000608) #25	PDE8B (ENSCDRG00005000565) #26	WDR41 (ENSCDRG00005000509) #27	OTP (ENSCDRG00005000470) #28	TBCA (ENSCDRG00005000444) #29	AP3B1 (ENSCDRG00005000366) #30	SCAMP1 (ENSCDRG00005000299) #31	LHFPL2 (ENSCDRG00005000275) #32	ARSB (ENSCDRG00005000234) #33	DMGDH (ENSCDRG00005000085) #35	BHMT2 (ENSCDRG00005000037) #34	BHMT (ENSCDRG00005019118) #36
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00550000074890 #8	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Pecora	ANCESTRAL SPECIES	6	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Percora_a	ANCESTRAL SPECIES	8	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Caprinae	ANCESTRAL SPECIES	30	ENSGT00950000182938.a	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	23	CPLX2 (ENSOARG00020020263)	HRH2 (ENSOARG00020020329)	SFXN1 (ENSOARG00020020382)	ENSOARG00020020572	GCNT4 (ENSOARG00020020622) #11	ENSOARG00020020636 #12	HMGCR (ENSOARG00020020760) #13	CERT1 (ENSOARG00020020967) #14	POLK (ENSOARG00020021498) #15	POC5 (ENSOARG00020021712) #17	SV2C (ENSOARG00020021763) #18	IQGAP2 (ENSOARG00020021962) #20	F2RL2 (ENSOARG00020022973) #19	F2R (ENSOARG00020022990) #23	F2RL1 (ENSOARG00020023002) #21	S100Z (ENSOARG00020023021) #22	CRHBP (ENSOARG00020023047) #24	AGGF1 (ENSOARG00020023108)	ZBED3 (ENSOARG00020023150) #25	PDE8B (ENSOARG00020023251) #26	ENSOARG00020024389	WDR41 (ENSOARG00020024404) #27	OTP (ENSOARG00020024451) #28	TBCA (ENSOARG00020024464) #29	AP3B1 (ENSOARG00020024527) #30	ENSOARG00020024603	SCAMP1 (ENSOARG00020024609) #31	ENSOARG00020024626 #22	LHFPL2 (ENSOARG00020024639) #32	ARSB (ENSOARG00020002992) #33	DMGDH (ENSOARG00020003036) #35
Rambouillet Sheep	MODERN SPECIES	23	F2RL2 (ENSOARG00020022973) #19	F2R (ENSOARG00020022990) #23	F2RL1 (ENSOARG00020023002) #21	S100Z (ENSOARG00020023021) #22	CRHBP (ENSOARG00020023047) #24	AGGF1 (ENSOARG00020023108)	ZBED3 (ENSOARG00020023150) #25	PDE8B (ENSOARG00020023251) #26	ENSOARG00020024389	WDR41 (ENSOARG00020024404) #27	OTP (ENSOARG00020024451) #28	TBCA (ENSOARG00020024464) #29	AP3B1 (ENSOARG00020024527) #30	ENSOARG00020024603	SCAMP1 (ENSOARG00020024609) #31	ENSOARG00020024626 #22	LHFPL2 (ENSOARG00020024639) #32	ARSB (ENSOARG00020002992) #33	DMGDH (ENSOARG00020003036) #35	BHMT (ENSOARG00020003124) #36	JMY (ENSOARG00020003148)	HOMER1 (ENSOARG00020003237)	TENT2 (ENSOARG00020003488)	CMYA5 (ENSOARG00020003611)	MTX3 (ENSOARG00020004194)	THBS4 (ENSOARG00020004359)	SERINC5 (ENSOARG00020004451)	GNPNAT1 (ENSOARG00020004685)	STYX (ENSOARG00020004723)	ENSOARG00020004750	PSMC6 (ENSOARG00020004771)
Goat	MODERN SPECIES	1	SFXN1 (ENSCHIG00000022473)	DRD1 (ENSCHIG00000024371)	ENSCHIG00000015735	GCNT4 (ENSCHIG00000008602) #11	ENSCHIG00000021264 #12	HMGCR (ENSCHIG00000015556) #13	CERT1 (ENSCHIG00000021950) #14	POLK (ENSCHIG00000008105) #15	ENSCHIG00000008486	POC5 (ENSCHIG00000009080) #17	SV2C (ENSCHIG00000016655) #18	F2RL2 (ENSCHIG00000002096) #19	IQGAP2 (ENSCHIG00000020854) #20	F2R (ENSCHIG00000022474) #23	F2RL1 (ENSCHIG00000026366) #21	S100Z (ENSCHIG00000018486) #22	CRHBP (ENSCHIG00000024251) #24	AGGF1 (ENSCHIG00000012662)	ZBED3 (ENSCHIG00000004171) #25	PDE8B (ENSCHIG00000023152) #26	WDR41 (ENSCHIG00000023139) #27	OTP (ENSCHIG00000018904) #28	TBCA (ENSCHIG00000021233) #29	AP3B1 (ENSCHIG00000018755) #30	ENSCHIG00000026947	SCAMP1 (ENSCHIG00000025008) #31	LHFPL2 (ENSCHIG00000014180) #32	ARSB (ENSCHIG00000001349) #33	DMGDH (ENSCHIG00000021924) #35	BHMT2 (ENSCHIG00000027021) #34	BHMT (ENSCHIG00000009078) #36
Bovinae	ANCESTRAL SPECIES	33	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00390000001830.j	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36
Bos	ANCESTRAL SPECIES	31	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36
Bos_b	ANCESTRAL SPECIES	28	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36
Hybrid Bos Indicus	MODERN SPECIES	1					GCNT4 (ENSBIXG00005011458) #11	ANKRD31 (ENSBIXG00005011423) #12	HMGCR (ENSBIXG00005011318) #13	CERT1 (ENSBIXG00005011247) #14	POLK (ENSBIXG00005011147) #15	POC5 (ENSBIXG00005010780) #17	SV2C (ENSBIXG00005010694) #18	ENSBIXG00005007521	IQGAP2 (ENSBIXG00005010623) #20	F2RL2 (ENSBIXG00005010387) #19	F2R (ENSBIXG00005000862) #23	S100Z (ENSBIXG00005010347) #22	CRHBP (ENSBIXG00005000840) #24	AGGF1 (ENSBIXG00005010286)	ENSBIXG00005010267	PDE8B (ENSBIXG00005010189) #26	ENSBIXG00005000677	WDR41 (ENSBIXG00005009893) #27	OTP (ENSBIXG00005009799) #28	TBCA (ENSBIXG00005000599) #29	ENSBIXG00005009736	AP3B1 (ENSBIXG00005009658) #30	ENSBIXG00005009460	SCAMP1 (ENSBIXG00005009438) #31	ARSB (ENSBIXG00005009357) #33	ENSBIXG00005009344	DMGDH (ENSBIXG00005009320) #35
Cow	MODERN SPECIES	1	HRH2 (ENSBTAG00000044071)	SFXN1 (ENSBTAG00000014536)	DRD1 (ENSBTAG00000047719)	GCNT4 (ENSBTAG00000050091) #11	ANKRD31 (ENSBTAG00000024878) #12	HMGCR (ENSBTAG00000007840) #13	CERT1 (ENSBTAG00000000081) #14	POLK (ENSBTAG00000004028) #15	POC5 (ENSBTAG00000007114) #17	SV2C (ENSBTAG00000017507) #18	ENSBTAG00000052974	IQGAP2 (ENSBTAG00000000897) #20	F2RL2 (ENSBTAG00000000898) #19	F2R (ENSBTAG00000020199) #23	F2RL1 (ENSBTAG00000034848) #21	S100Z (ENSBTAG00000020201) #22	CRHBP (ENSBTAG00000020202) #24	AGGF1 (ENSBTAG00000034823)	ZBED3 (ENSBTAG00000052845) #25	PDE8B (ENSBTAG00000020205) #26	WDR41 (ENSBTAG00000020212) #27	OTP (ENSBTAG00000009249) #28	TBCA (ENSBTAG00000003263) #29	ENSBTAG00000052130	AP3B1 (ENSBTAG00000005016) #30	SCAMP1 (ENSBTAG00000007371) #31	LHFPL2 (ENSBTAG00000007374) #32	ARSB (ENSBTAG00000008341) #33	DMGDH (ENSBTAG00000002110) #35	BHMT2 (ENSBTAG00000038234) #34	BHMT (ENSBTAG00000002255) #36
Bos_a	ANCESTRAL SPECIES	26	ENSGT00940000158761	ENSGT01030000234641.b.a.b.a.b	ENSGT00940000155857	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00730000111121	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00390000001830.i.a.a.b	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a	ENSGT00940000156354
Domestic yak	MODERN SPECIES	2	DRD1 (ENSBGRG00000011292)	GCNT4 (ENSBGRG00000011247) #11	ENSBGRG00000011228	ANKRD31 (ENSBGRG00000010828) #12	HMGCR (ENSBGRG00000010597) #13	CERT1 (ENSBGRG00000009779) #14	POLK (ENSBGRG00000009306) #15	POC5 (ENSBGRG00000008737) #17	SV2C (ENSBGRG00000008621) #18	ENSBGRG00000008593	F2RL2 (ENSBGRG00000008567) #19	IQGAP2 (ENSBGRG00000007931) #20	F2R (ENSBGRG00000007892) #23	F2RL1 (ENSBGRG00000007822) #21	ENSBGRG00000007803	S100Z (ENSBGRG00000007761) #22	ENSBGRG00000007739	AGGF1 (ENSBGRG00000007412)	ZBED3 (ENSBGRG00000007380) #25	PDE8B (ENSBGRG00000006555) #26	WDR41 (ENSBGRG00000006363) #27	OTP (ENSBGRG00000006298) #28	TBCA (ENSBGRG00000006236) #29	ENSBGRG00000006222	AP3B1 (ENSBGRG00000006021) #30	SCAMP1 (ENSBGRG00000005900) #31	LHFPL2 (ENSBGRG00000005875) #32	ENSBGRG00000005848	ARSB (ENSBGRG00000005773) #33	DMGDH (ENSBGRG00000005663) #35	ENSBGRG00000005598 #34
Wild yak	MODERN SPECIES	297				GCNT4 (ENSBMUG00000012260) #11	ANKRD31 (ENSBMUG00000012237) #12	HMGCR (ENSBMUG00000012171) #13	CERT1 (ENSBMUG00000011873) #14	POLK (ENSBMUG00000011634) #15	POC5 (ENSBMUG00000011568) #17	SV2C (ENSBMUG00000011496) #18	ENSBMUG00000011462	F2RL2 (ENSBMUG00000011445) #19	IQGAP2 (ENSBMUG00000011350) #20	F2R (ENSBMUG00000011164) #23	F2RL1 (ENSBMUG00000011152) #21	S100Z (ENSBMUG00000011148) #22	AGGF1 (ENSBMUG00000011125)	PDE8B (ENSBMUG00000011054) #26	WDR41 (ENSBMUG00000010747) #27	OTP (ENSBMUG00000010682) #28	TBCA (ENSBMUG00000010673) #29	ENSBMUG00000010660	ENSBMUG00000010637
American bison	MODERN SPECIES	3169	ENSBBBG00000005945	ENSBBBG00000022510	GCNT4 (ENSBBBG00000005939) #11	ANKRD31 (ENSBBBG00000022499) #12	HMGCR (ENSBBBG00000005907) #13	CERT1 (ENSBBBG00000022291) #14	POLK (ENSBBBG00000021965) #15	ANKDD1B (ENSBBBG00000008030) #16	POC5 (ENSBBBG00000021773) #17	SV2C (ENSBBBG00000006918) #18	ENSBBBG00000021689	IQGAP2 (ENSBBBG00000021677) #20	F2RL2 (ENSBBBG00000021481) #19	F2R (ENSBBBG00000021478) #23	F2RL1 (ENSBBBG00000021471) #21	S100Z (ENSBBBG00000021469) #22	CRHBP (ENSBBBG00000021464) #24	AGGF1 (ENSBBBG00000021443)	PDE8B (ENSBBBG00000021396) #26	WDR41 (ENSBBBG00000021018) #27	TBCA (ENSBBBG00000005639) #29	ENSBBBG00000005636	AP3B1 (ENSBBBG00000005629) #30	SCAMP1 (ENSBBBG00000020857) #31	LHFPL2 (ENSBBBG00000020821) #32	ARSB (ENSBBBG00000020814) #33
Siberian musk deer	MODERN SPECIES	69	SFXN1 (ENSMMSG00000014529)	DRD1 (ENSMMSG00000014544)	ENSMMSG00000014552	ENSMMSG00000014567	GCNT4 (ENSMMSG00000014582) #11	ANKRD31 (ENSMMSG00000014614) #12	HMGCR (ENSMMSG00000014812) #13	CERT1 (ENSMMSG00000014921) #14	POLK (ENSMMSG00000015182) #15	POC5 (ENSMMSG00000015294) #17	SV2C (ENSMMSG00000015327) #18	IQGAP2 (ENSMMSG00000015431) #20	F2RL2 (ENSMMSG00000015650) #19	F2R (ENSMMSG00000015666) #23	F2RL1 (ENSMMSG00000015677) #21	S100Z (ENSMMSG00000015687) #22	CRHBP (ENSMMSG00000015697) #24	ENSMMSG00000015737	AGGF1 (ENSMMSG00000015751)	ZBED3 (ENSMMSG00000015777) #25	PDE8B (ENSMMSG00000015917) #26	WDR41 (ENSMMSG00000017180) #27	OTP (ENSMMSG00000017274) #28	ENSMMSG00000017301	ENSMMSG00000017442	AP3B1 (ENSMMSG00000017470) #30	SCAMP1 (ENSMMSG00000017674) #31	LHFPL2 (ENSMMSG00000017736) #32	ARSB (ENSMMSG00000017759) #33	DMGDH (ENSMMSG00000017858) #35	BHMT2 (ENSMMSG00000017965) #34
Yarkand deer	MODERN SPECIES	3	HRH2 (ENSCHYG00000005212)	SFXN1 (ENSCHYG00000005262)	DRD1 (ENSCHYG00000005319)	GCNT4 (ENSCHYG00000005367) #11	ANKRD31 (ENSCHYG00000005425) #12	HMGCR (ENSCHYG00000005715) #13	CERT1 (ENSCHYG00000005851) #14	POLK (ENSCHYG00000006041) #15	POC5 (ENSCHYG00000006247) #17	SV2C (ENSCHYG00000006307) #18	IQGAP2 (ENSCHYG00000006385) #20	F2RL2 (ENSCHYG00000006675) #19	F2R (ENSCHYG00000006697) #23	ENSCHYG00000006719	F2RL1 (ENSCHYG00000006741) #21	S100Z (ENSCHYG00000006771) #22	CRHBP (ENSCHYG00000006799) #24	AGGF1 (ENSCHYG00000006866)	ZBED3 (ENSCHYG00000006906) #25	ENSCHYG00000006937	ENSCHYG00000006952	ENSCHYG00000006962 #26	ENSCHYG00000007028 #26	WDR41 (ENSCHYG00000007090) #27	OTP (ENSCHYG00000007305) #28	TBCA (ENSCHYG00000007320) #29	ENSCHYG00000007338	ENSCHYG00000007344	ENSCHYG00000007356	AP3B1 (ENSCHYG00000007402) #30	SCAMP1 (ENSCHYG00000007687) #31
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00530000063000.a.a.a.f	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00530000063000.a.a.a.f	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00950000183076.b #20	ENSGT01050000244840.A.b.b #19	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000018706.m.a #9	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00940000154586.g.b	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00510000048902.a #10	ENSGT00940000159721 #11	ENSGT00940000162618 #12	ENSGT00940000155305 #13	ENSGT00940000155123.b #14	ENSGT00940000156667 #15	ENSGT00940000154170.A #16	ENSGT00390000004454 #17	ENSGT00940000154586.g.b	ENSGT00950000182940.b.b #18	ENSGT00910000147370	ENSGT01050000244840.A.b.b #19	ENSGT00950000183076.b #20	ENSGT01050000244840.A.a.b #23	ENSGT01050000244840.A.a.a #21	ENSGT00940000161125 #22	ENSGT00390000001362 #24	ENSGT00730000111121	ENSGT00940000164103 #25	ENSGT00940000157817 #26	ENSGT00390000017026 #27	ENSGT00940000159952 #28	ENSGT00390000009710 #29	ENSGT00940000157603 #30	ENSGT00940000157310 #31	ENSGT00990000203589.b.b #32	ENSGT00940000158270 #33	ENSGT00940000158176 #35	ENSGT00390000003122.c.b #34	ENSGT00390000003122.c.a #36	ENSGT00510000046704.b.a
Beluga whale	MODERN SPECIES	71	NSA2 (ENSDLEG00000008766) #9	FAM169A (ENSDLEG00000008731) #10	GCNT4 (ENSDLEG00000008712) #11	ANKRD31 (ENSDLEG00000008542) #12	HMGCR (ENSDLEG00000008447) #13	COL4A3BP (ENSDLEG00000008328) #14	POLK (ENSDLEG00000008261) #15	POC5 (ENSDLEG00000008196) #17	ENSDLEG00000008154	SV2C (ENSDLEG00000008107) #18	ENSDLEG00000008092	F2RL2 (ENSDLEG00000008080) #19	IQGAP2 (ENSDLEG00000008039) #20	F2R (ENSDLEG00000008028) #23	F2RL1 (ENSDLEG00000008016) #21	S100Z (ENSDLEG00000008008) #22	CRHBP (ENSDLEG00000007986) #24	AGGF1 (ENSDLEG00000007958)	ZBED3 (ENSDLEG00000007936) #25	PDE8B (ENSDLEG00000015062) #26	WDR41 (ENSDLEG00000014960) #27	OTP (ENSDLEG00000014945) #28	TBCA (ENSDLEG00000014906) #29	AP3B1 (ENSDLEG00000014741) #30	SCAMP1 (ENSDLEG00000014708) #31	LHFPL2 (ENSDLEG00000014699) #32	ARSB (ENSDLEG00000014686) #33	DMGDH (ENSDLEG00000014641) #35	BHMT2 (ENSDLEG00000014617) #34	BHMT (ENSDLEG00000014599) #36	JMY (ENSDLEG00000014574)
Narwhal	MODERN SPECIES	298	ENSMMNG00015006875 #9	FAM169A (ENSMMNG00015006911) #10	GCNT4 (ENSMMNG00015006954) #11	ANKRD31 (ENSMMNG00015007010) #12	HMGCR (ENSMMNG00015007107) #13	CERT1 (ENSMMNG00015007218) #14	POLK (ENSMMNG00015007374) #15	ANKDD1B (ENSMMNG00015007467) #16	POC5 (ENSMMNG00015007540) #17	SV2C (ENSMMNG00015007600) #18	ENSMMNG00015007640	IQGAP2 (ENSMMNG00015007731) #20	F2RL2 (ENSMMNG00015007923) #19	F2R (ENSMMNG00015007933) #23	F2RL1 (ENSMMNG00015007943) #21	S100Z (ENSMMNG00015007958) #22	CRHBP (ENSMMNG00015007977) #24	AGGF1 (ENSMMNG00015008009)	ZBED3 (ENSMMNG00015008041) #25	PDE8B (ENSMMNG00015008112) #26	WDR41 (ENSMMNG00015008176) #27	OTP (ENSMMNG00015008215) #28	TBCA (ENSMMNG00015008230) #29	AP3B1 (ENSMMNG00015008260) #30	SCAMP1 (ENSMMNG00015008303) #31	LHFPL2 (ENSMMNG00015008328) #32	ARSB (ENSMMNG00015008346) #33	DMGDH (ENSMMNG00015008374) #35	BHMT2 (ENSMMNG00015008393) #34	BHMT (ENSMMNG00015008415) #36	JMY (ENSMMNG00015008440)
Vaquita	MODERN SPECIES	14	GFM2 (ENSPSNG00000006458) #8	ENSPSNG00000006396 #9	FAM169A (ENSPSNG00000006255) #10	GCNT4 (ENSPSNG00000006178) #11	ANKRD31 (ENSPSNG00000006120) #12	HMGCR (ENSPSNG00000006005) #13	CERT1 (ENSPSNG00000005809) #14	POLK (ENSPSNG00000005609) #15	POC5 (ENSPSNG00000005438) #17	ENSPSNG00000005362	SV2C (ENSPSNG00000005309) #18	F2RL2 (ENSPSNG00000005286) #19	IQGAP2 (ENSPSNG00000005144) #20	F2R (ENSPSNG00000005065) #23	F2RL1 (ENSPSNG00000005843) #21	S100Z (ENSPSNG00000005821) #22	CRHBP (ENSPSNG00000005773) #24	AGGF1 (ENSPSNG00000005724)	ZBED3 (ENSPSNG00000005710) #25	PDE8B (ENSPSNG00000005114) #26	WDR41 (ENSPSNG00000004776) #27	OTP (ENSPSNG00000004725) #28	TBCA (ENSPSNG00000004666) #29	AP3B1 (ENSPSNG00000004553) #30	SCAMP1 (ENSPSNG00000004447) #31	LHFPL2 (ENSPSNG00000004403) #32	ARSB (ENSPSNG00000004356) #33	DMGDH (ENSPSNG00000004287) #35	BHMT2 (ENSPSNG00000004227) #34	BHMT (ENSPSNG00000004175) #36	JMY (ENSPSNG00000004120)
Dolphin	MODERN SPECIES	5128																S100Z (ENSTTRG00000004749) #22
Sperm whale	MODERN SPECIES	19	NSA2 (ENSPCTG00005001800) #9	FAM169A (ENSPCTG00005001823) #10	ENSPCTG00005001839	GCNT4 (ENSPCTG00005001860) #11	ANKRD31 (ENSPCTG00005001908) #12	HMGCR (ENSPCTG00005002015) #13	COL4A3BP (ENSPCTG00005002102) #14	POLK (ENSPCTG00005002299) #15	POC5 (ENSPCTG00005002372) #17	SV2C (ENSPCTG00005002439) #18	IQGAP2 (ENSPCTG00005002535) #20	F2RL2 (ENSPCTG00005002767) #19	ENSPCTG00005002778	F2R (ENSPCTG00005002792) #23	F2RL1 (ENSPCTG00005002799) #21	S100Z (ENSPCTG00005002807) #22	AGGF1 (ENSPCTG00005002832)	ZBED3 (ENSPCTG00005002866) #25	PDE8B (ENSPCTG00005002983) #26	WDR41 (ENSPCTG00005003516) #27	OTP (ENSPCTG00005003577) #28	TBCA (ENSPCTG00005003597) #29	AP3B1 (ENSPCTG00005003664) #30	SCAMP1 (ENSPCTG00005003758) #31	LHFPL2 (ENSPCTG00005003792) #32	ARSB (ENSPCTG00005003811) #33	DMGDH (ENSPCTG00005003853) #35	BHMT (ENSPCTG00005003876) #36	JMY (ENSPCTG00005003899)	HOMER1 (ENSPCTG00005003925)	TENT2 (ENSPCTG00005003973)
Blue whale	MODERN SPECIES	14	ENSBMSG00010004702 #9	ENSBMSG00010004714 #10	ENSBMSG00010004732	GCNT4 (ENSBMSG00010004754) #11	ANKRD31 (ENSBMSG00010004774) #12	HMGCR (ENSBMSG00010004832) #13	CERT1 (ENSBMSG00010004912) #14	POLK (ENSBMSG00010005438) #15	POC5 (ENSBMSG00010005501) #17	SV2C (ENSBMSG00010005531) #18	ENSBMSG00010005549	IQGAP2 (ENSBMSG00010005591) #20	F2RL2 (ENSBMSG00010005686) #19	F2R (ENSBMSG00010005694) #23	F2RL1 (ENSBMSG00010005699) #21	S100Z (ENSBMSG00010005711) #22	CRHBP (ENSBMSG00010005714) #24	AGGF1 (ENSBMSG00010005734)	ZBED3 (ENSBMSG00010005760) #25	PDE8B (ENSBMSG00010005858) #26	WDR41 (ENSBMSG00010006297) #27	OTP (ENSBMSG00010006319) #28	ENSBMSG00010006335 #29	ENSBMSG00010006352	AP3B1 (ENSBMSG00010006360) #30	SCAMP1 (ENSBMSG00010006378) #31	LHFPL2 (ENSBMSG00010006395) #32	ARSB (ENSBMSG00010006407) #33	DMGDH (ENSBMSG00010006427) #35	BHMT2 (ENSBMSG00010006453) #34	BHMT (ENSBMSG00010006489) #36