Acanthomorphata ANCESTRAL SPECIES 2 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00980000200496 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Euacanthomorphacea ANCESTRAL SPECIES 5 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00980000200496 ENSGT01100000263643 #13 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000177451 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 #13 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000177451 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000177451 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 Ovalentaria ANCESTRAL SPECIES 1 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000177451 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 Atherinomorphae ANCESTRAL SPECIES 6 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b ENSGT00390000010440.h #22 ENSGT00940000177451 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 Cyprinodontiformes ANCESTRAL SPECIES 3 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000177451 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 Aplocheiloidei ANCESTRAL SPECIES 7 ENSGT00730000110974.a ENSGT00950000182883.a.a.a ENSGT00940000154268.k.a #9 ENSGT00940000157900 #10 ENSGT00950000183046.a.b.l #11 ENSGT00940000158922.d #12 ENSGT01100000263643 #13 ENSGT01100000263610 #14 ENSGT00390000016292 #15 ENSGT00940000158827 #16 ENSGT00940000156559 #17 ENSGT00940000158377.a #18 ENSGT00940000158767 #19 ENSGT00940000159539 #20 ENSGT00940000165921 #21 ENSGT00390000010440.h #22 ENSGT00940000177451 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT01050000245493 ENSGT00940000154991.a.b #30 ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 Turquoise killifish MODERN SPECIES 1614 ENSNFUG00015000858 #7 ENSNFUG00015000861 #8 NDUFA4 (ENSNFUG00015000864) #9 slc35b1 (ENSNFUG00015000882) #10 FAM117A (ENSNFUG00015000930) #11 RUNDC3A (ENSNFUG00015000950) #12 ENSNFUG00015000975 #13 ENSNFUG00015000981 #14 RNF113A (ENSNFUG00015000993) #15 STRADA (ENSNFUG00015001034) #16 ddx42 (ENSNFUG00015001120) #17 limd2 (ENSNFUG00015001158) #18 MAP3K3 (ENSNFUG00015001184) #19 GFAP (ENSNFUG00015001229) #20 kcnh6a (ENSNFUG00015001250) #21 selenow2b (ENSNFUG00015001263) #22 slc4a1a (ENSNFUG00015001398) #23 ubtf (ENSNFUG00015002045) #24 atxn7l3a (ENSNFUG00015002321) #25 tmub2 (ENSNFUG00015002335) #26 ASB16 (ENSNFUG00015002348) #27 ENSNFUG00015002363 #28 ENSNFUG00015002373 #29 ENSNFUG00015002379 #30 ENSNFUG00015002383 #31 ZNF281 (ENSNFUG00015002394) #32 Nfu_g_1_007551 (ENSNFUG00015002399) #33 ENSNFUG00015002404 #34 TMEM98 (ENSNFUG00015002405) #35 ENSNFUG00015002410 #36 ENSNFUG00015002419 #37 Mangrove rivulus MODERN SPECIES 47 NGFR (ENSKMAG00000009613) ENSKMAG00000009635 ndufa4a (ENSKMAG00000009645) #9 slc35b1 (ENSKMAG00000009665) #10 ENSKMAG00000009693 #11 RUNDC3A (ENSKMAG00000009741) #12 ENSKMAG00000009809 #13 ENSKMAG00000009817 #14 rnf113a (ENSKMAG00000009830) #15 strada (ENSKMAG00000009851) #16 ddx42 (ENSKMAG00000009914) #17 limd2 (ENSKMAG00000009984) #18 ENSKMAG00000009996 #19 gfap (ENSKMAG00000010022) #20 kcnh6a (ENSKMAG00000010062) #21 selenow2b (ENSKMAG00000010109) #22 ENSKMAG00000010144 slc4a1a (ENSKMAG00000010157) #23 ubtf (ENSKMAG00000010213) #24 atxn7l3a (ENSKMAG00000010250) #25 tmub2 (ENSKMAG00000010272) #26 asb16 (ENSKMAG00000010286) #27 ENSKMAG00000010309 #28 ENSKMAG00000010331 asic2 (ENSKMAG00000010367) ##30 MPP3 (ENSKMAG00000010453) ENSKMAG00000010668 ENSKMAG00000010686 #32 ENSKMAG00000010705 #33 tmem98 (ENSKMAG00000010741) #35 ENSKMAG00000010789 #36 Cyprinodontoidei ANCESTRAL SPECIES 18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Poeciliinae ANCESTRAL SPECIES 1 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00940000177451 ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Poecilia ANCESTRAL SPECIES 8 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00940000177451 ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Guppy MODERN SPECIES 460 ddx42 (ENSPREG00000009926) #17 strada (ENSPREG00000009916) #16 rnf113a (ENSPREG00000009900) #15 ENSPREG00000009896 #14 ENSPREG00000009889 ENSPREG00000009881 RUNDC3A (ENSPREG00000009836) #12 ENSPREG00000009824 #11 slc35b1 (ENSPREG00000009804) #10 ndufa4a (ENSPREG00000009800) #9 ENSPREG00000009786 ENSPREG00000009778 NGFR (ENSPREG00000009763) ENSPREG00000009756 ENSPREG00000009746 selenow2b (ENSPREG00000009740) #22 slc4a1a (ENSPREG00000009682) #23 ubtf (ENSPREG00000009616) #24 atxn7l3a (ENSPREG00000009586) #25 tmub2 (ENSPREG00000009572) #26 asb16 (ENSPREG00000009560) #27 ENSPREG00000009541 #28 ENSPREG00000009532 #30 ENSPREG00000009467 EZH1 (ENSPREG00000009410) ENSPREG00000009360 PLEKHH3 (ENSPREG00000009324) tubg1 (ENSPREG00000009293) ENSPREG00000009272 mlx (ENSPREG00000009240) FMNL1 (ENSPREG00000009204) NAME_6 ANCESTRAL SPECIES 18 ENSGT00940000165921 #21 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00940000177451 ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Sailfin molly MODERN SPECIES 2944 ENSPLAG00000018601 ENSPLAG00000018629 MIEN1 (ENSPLAG00000018638) #22 slc4a1a (ENSPLAG00000018685) #23 Platyfish MODERN SPECIES 7 strada (ENSXMAG00000027127) #16 rnf113a (ENSXMAG00000008169) #15 RUNDC3A (ENSXMAG00000020987) #12 ENSXMAG00000021920 #14 ENSXMAG00000023789 ENSXMAG00000025357 ENSXMAG00000008192 #11 ENSXMAG00000026407 slc35b1 (ENSXMAG00000025030) #10 ndufa4a (ENSXMAG00000022120) #9 ENSXMAG00000026283 NXPH3 (ENSXMAG00000008203) NGFR (ENSXMAG00000008204) ENSXMAG00000008208 ENSXMAG00000026489 selenow2b (ENSXMAG00000025994) #22 slc4a1a (ENSXMAG00000008209) #23 ubtf (ENSXMAG00000008248) #24 atxn7l3a (ENSXMAG00000008271) #25 tmub2 (ENSXMAG00000008276) #26 asb16 (ENSXMAG00000008279) #27 ENSXMAG00000008282 #28 ENSXMAG00000019737 #29 asic2 (ENSXMAG00000008283) ##30 MPP3 (ENSXMAG00000008287) ENSXMAG00000008316 #31 ZNF281 (ENSXMAG00000008317) #32 ENSXMAG00000027401 #33 tmem98 (ENSXMAG00000008324) #35 ENSXMAG00000008332 #36 ENSXMAG00000008337 NAME_4 ANCESTRAL SPECIES 47 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000177451 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 Sheepshead minnow MODERN SPECIES 506 ENSCVAG00000003046 ENSCVAG00000003050 ENSCVAG00000003054 selenow2b (ENSCVAG00000003068) #22 axin1 (ENSCVAG00000003102) ENSCVAG00000003112 zfand2a (ENSCVAG00000003118) UNCX (ENSCVAG00000003123) micall2a (ENSCVAG00000003138) INTS1 (ENSCVAG00000003222) mafk (ENSCVAG00000003229) tmem184a (ENSCVAG00000003246) psmg3 (ENSCVAG00000003251) ENSCVAG00000000105 Oryzias ANCESTRAL SPECIES ENSGT00940000165921 #21 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Oryzias_b ANCESTRAL SPECIES 11 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00980000200496 ENSGT01100000264505 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000165535 #29 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Indian medaka MODERN SPECIES 9 gfap (ENSOMEG00000019912) #20 MAP3K3 (ENSOMEG00000020000) #19 limd2 (ENSOMEG00000020039) #18 ddx42 (ENSOMEG00000020093) #17 strada (ENSOMEG00000020155) #16 rnf113a (ENSOMEG00000020197) #15 ENSOMEG00000020212 ENSOMEG00000020221 RUNDC3A (ENSOMEG00000020257) #12 ENSOMEG00000020276 #11 slc35b1 (ENSOMEG00000020317) #10 ndufa4a (ENSOMEG00000020343) #9 NXPH3 (ENSOMEG00000020355) ENSOMEG00000020420 ENSOMEG00000020433 selenow2b (ENSOMEG00000020458) #22 slc4a1a (ENSOMEG00000020519) #23 ubtf (ENSOMEG00000020580) #24 tmub2 (ENSOMEG00000020595) #26 ENSOMEG00000020693 asb16 (ENSOMEG00000020735) #27 ENSOMEG00000020806 #28 ENSOMEG00000020825 #29 asic2 (ENSOMEG00000020866) ##30 MPP3 (ENSOMEG00000020973) ENSOMEG00000021099 #31 ENSOMEG00000000555 #32 ENSOMEG00000021172 #33 tmem98 (ENSOMEG00000021183) #35 ENSOMEG00000021196 #36 ENSOMEG00000021242 #36 Javanese ricefish MODERN SPECIES 22 gfap (ENSOJAG00000014458) #20 MAP3K3 (ENSOJAG00000014122) #19 limd2 (ENSOJAG00000014089) #18 ddx42 (ENSOJAG00000013862) #17 strada (ENSOJAG00000013385) #16 rnf113a (ENSOJAG00000013338) #15 ENSOJAG00000013331 ENSOJAG00000013328 RUNDC3A (ENSOJAG00000013280) #12 ENSOJAG00000013271 #11 slc35b1 (ENSOJAG00000013159) #10 ndufa4a (ENSOJAG00000013130) #9 NXPH3 (ENSOJAG00000013124) NGFR (ENSOJAG00000013065) ENSOJAG00000013060 selenow2b (ENSOJAG00000013038) #22 slc4a1a (ENSOJAG00000012115) #23 ubtf (ENSOJAG00000012079) #24 ENSOJAG00000012046 ENSOJAG00000012037 asb16 (ENSOJAG00000012029) #27 ENSOJAG00000012006 #28 ENSOJAG00000012000 ENSOJAG00000011985 asic2 (ENSOJAG00000011839) ##30 MPP3 (ENSOJAG00000011690) ENSOJAG00000011658 #31 ZNF281 (ENSOJAG00000011655) #32 ENSOJAG00000011641 #33 tmem98 (ENSOJAG00000011625) #35 ENSOJAG00000011602 #36 Oryzias_a ANCESTRAL SPECIES 10 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT01100000263610 #14 ENSGT01100000264505 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Japanese Medaka HdrR MODERN SPECIES 22 gfap (ENSORLG00000002346) #20 MAP3K3 (ENSORLG00000002357) #19 limd2 (ENSORLG00000023454) #18 ddx42 (ENSORLG00000002395) #17 strada (ENSORLG00000002426) #16 rnf113a (ENSORLG00000002442) #15 RUNDC3A (ENSORLG00000002487) #12 ENSORLG00000022546 #14 ENSORLG00000024605 ENSORLG00000002499 #11 slc35b1 (ENSORLG00000002514) #10 ndufa4a (ENSORLG00000002522) #9 NXPH3 (ENSORLG00000027745) ENSORLG00000002533 ENSORLG00000002537 selenow2b (ENSORLG00000022585) #22 slc4a1a (ENSORLG00000002557) #23 ubtf (ENSORLG00000002593) #24 ENSORLG00000002605 tmub2 (ENSORLG00000002612) #26 asb16 (ENSORLG00000002620) #27 ENSORLG00000029612 #28 ENSORLG00000002626 #30 asic2 (ENSORLG00000002768) ##30 MPP3 (ENSORLG00000002793) ENSORLG00000024122 #31 ZNF281 (ENSORLG00000002799) #32 ENSORLG00000029022 tmem98 (ENSORLG00000002812) #35 ENSORLG00000002829 #36 ENSORLG00000023248 Chinese medaka MODERN SPECIES 503 NXPH3 (ENSOSIG00000019097) NGFR (ENSOSIG00000019109) ENSOSIG00000019112 ENSOSIG00000019113 selenow2b (ENSOSIG00000019115) #22 slc4a1a (ENSOSIG00000019123) #23 ubtf (ENSOSIG00000019158) #24 ENSOSIG00000019251 tmub2 (ENSOSIG00000019254) #26 asb16 (ENSOSIG00000019255) #27 ENSOSIG00000019262 #28 asic2 (ENSOSIG00000019279) ##30 MPP3 (ENSOSIG00000019411) ENSOSIG00000019472 #32 ENSOSIG00000019475 #33 tmem98 (ENSOSIG00000019478) #35 ENSOSIG00000019486 #36 ENSOSIG00000000171 retsat.2 (ENSOSIG00000000177) nmt1a (ENSOSIG00000000226) Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Pomacentridae ANCESTRAL SPECIES 24 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Pomacentridae_A ANCESTRAL SPECIES 15 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Amphiprion ANCESTRAL SPECIES 9 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT01100000263981 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Clown anemonefish MODERN SPECIES 3408 ddx42 (ENSAOCG00000003520) #17 strada (ENSAOCG00000003498) #16 rnf113a (ENSAOCG00000003485) #15 RUNDC3A (ENSAOCG00000003476) #12 ENSAOCG00000003474 #14 ENSAOCG00000003470 FAM117A (ENSAOCG00000002296) #11 slc35b1 (ENSAOCG00000003459) #10 ndufa4a (ENSAOCG00000003450) #9 spop (ENSAOCG00000003449) NXPH3 (ENSAOCG00000003444) ENSAOCG00000003439 NGFR (ENSAOCG00000003435) ENSAOCG00000003427 ENSAOCG00000003425 selenow2b (ENSAOCG00000003420) #22 slc4a1a (ENSAOCG00000003417) #23 ubtf (ENSAOCG00000003404) #24 atxn7l3a (ENSAOCG00000003384) #25 tmub2 (ENSAOCG00000003373) #26 asb16 (ENSAOCG00000003372) #27 ENSAOCG00000003365 #28 ENSAOCG00000003359 #30 asic2 (ENSAOCG00000003355) ##30 Orange clownfish MODERN SPECIES 5 MAP3K3 (ENSAPEG00000000898) #19 limd2 (ENSAPEG00000000969) #18 ddx42 (ENSAPEG00000000984) #17 strada (ENSAPEG00000001041) #16 rnf113a (ENSAPEG00000001084) #15 RUNDC3A (ENSAPEG00000001102) #12 ENSAPEG00000001279 #14 ENSAPEG00000001288 FAM117A (ENSAPEG00000001298) #11 slc35b1 (ENSAPEG00000001343) #10 ndufa4a (ENSAPEG00000001384) #9 spop (ENSAPEG00000001406) NXPH3 (ENSAPEG00000001445) NGFR (ENSAPEG00000001456) ENSAPEG00000001491 selenow2b (ENSAPEG00000001497) #22 slc4a1a (ENSAPEG00000001508) #23 ubtf (ENSAPEG00000001545) #24 atxn7l3a (ENSAPEG00000001614) #25 tmub2 (ENSAPEG00000001658) #26 asb16 (ENSAPEG00000001675) #27 ENSAPEG00000001708 #28 ENSAPEG00000001787 #30 asic2 (ENSAPEG00000001805) ##30 MPP3 (ENSAPEG00000001839) ENSAPEG00000001915 #31 ZNF281 (ENSAPEG00000001948) #32 ENSAPEG00000002028 #33 tmem98 (ENSAPEG00000002035) #35 ENSAPEG00000002073 #36 ENSAPEG00000002146 Spiny chromis MODERN SPECIES 248 NGFR (ENSAPOG00000019180) ENSAPOG00000019154 selenow2b (ENSAPOG00000019146) #22 slc4a1a (ENSAPOG00000019116) #23 ubtf (ENSAPOG00000019015) #24 ENSAPOG00000018932 tmub2 (ENSAPOG00000018865) #26 asb16 (ENSAPOG00000018859) #27 ENSAPOG00000018810 #28 ENSAPOG00000018800 #30 ENSAPOG00000018788 asic2 (ENSAPOG00000018769) ##30 Bicolor damselfish MODERN SPECIES 561 ENSSPAG00000017616 selenow2b (ENSSPAG00000017621) #22 slc4a1a (ENSSPAG00000017645) #23 ubtf (ENSSPAG00000017777) #24 ENSSPAG00000017999 tmub2 (ENSSPAG00000018091) #26 ENSSPAG00000018104 asb16 (ENSSPAG00000018127) #27 ENSSPAG00000018139 #28 ENSSPAG00000018154 #30 ENSSPAG00000018162 #30 Cichlidae ANCESTRAL SPECIES 16 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000174710 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Midas cichlid MODERN SPECIES 550 ddx42 (ENSACIG00000007376) #17 ENSACIG00000007408 strada (ENSACIG00000007423) #16 rnf113a (ENSACIG00000007458) #15 RUNDC3A (ENSACIG00000007483) #12 ENSACIG00000007506 #14 ENSACIG00000007510 #13 FAM117A (ENSACIG00000007517) #11 slc35b1 (ENSACIG00000007536) #10 ndufa4a (ENSACIG00000007557) #9 spop (ENSACIG00000007656) NXPH3 (ENSACIG00000007686) NGFR (ENSACIG00000007695) ENSACIG00000007725 ENSACIG00000007737 selenow2b (ENSACIG00000007747) #22 slc4a1a (ENSACIG00000007777) #23 ubtf (ENSACIG00000007826) #24 atxn7l3a (ENSACIG00000007998) #25 tmub2 (ENSACIG00000008030) #26 asb16 (ENSACIG00000008051) #27 ENSACIG00000008083 #28 ENSACIG00000008095 #30 asic2 (ENSACIG00000008109) ##30 MPP3 (ENSACIG00000008139) ENSACIG00000008218 ZNF281 (ENSACIG00000008230) #32 ENSACIG00000008252 #33 tmem98 (ENSACIG00000008272) #35 ENSACIG00000008286 #36 ENSACIG00000008308 Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000174710 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Nile tilapia MODERN SPECIES 16 strada (ENSONIG00000000738) #16 rnf113a (ENSONIG00000042350) #15 ENSONIG00000037829 #14 ENSONIG00000027590 ENSONIG00000037074 #13 RUNDC3A (ENSONIG00000000748) #12 FAM117A (ENSONIG00000000757) #11 slc35b1 (ENSONIG00000000758) #10 NDUFA4 (ENSONIG00000042265) #9 spop (ENSONIG00000000767) NXPH3 (ENSONIG00000034515) NGFR (ENSONIG00000028321) ENSONIG00000027117 ENSONIG00000032741 ENSONIG00000000776 selenow2b (ENSONIG00000039635) #22 slc4a1a (ENSONIG00000000778) #23 ubtf (ENSONIG00000000796) #24 atxn7l3a (ENSONIG00000000812) #25 tmub2 (ENSONIG00000000814) #26 asb16 (ENSONIG00000000816) #27 ENSONIG00000000821 #28 ENSONIG00000030325 #30 ENSONIG00000035362 asic2 (ENSONIG00000000822) ##30 MPP3 (ENSONIG00000000827) ENSONIG00000042435 #31 ZNF281 (ENSONIG00000000839) #32 ENSONIG00000000844 #33 tmem98 (ENSONIG00000031048) #35 ENSONIG00000000847 #36 Pseudocrenilabrinae_A ANCESTRAL SPECIES 12 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000174710 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Haplochromini ANCESTRAL SPECIES 12 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000174710 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Burton s mouthbrooder MODERN SPECIES 314 ddx42 (ENSHBUG00000008705) #17 strada (ENSHBUG00000008691) #16 rnf113a (ENSHBUG00000008626) #15 RUNDC3A (ENSHBUG00000008611) #12 ENSHBUG00000008602 #14 ENSHBUG00000008593 ENSHBUG00000008586 #13 FAM117A (ENSHBUG00000008573) #11 slc35b1 (ENSHBUG00000008561) #10 ndufa4a (ENSHBUG00000008529) #9 ENSHBUG00000008421 spop (ENSHBUG00000008411) NXPH3 (ENSHBUG00000008374) NGFR (ENSHBUG00000008364) ENSHBUG00000008326 selenow2b (ENSHBUG00000008305) #22 slc4a1a (ENSHBUG00000008288) #23 ubtf (ENSHBUG00000008228) #24 ENSHBUG00000008136 tmub2 (ENSHBUG00000008032) #26 asb16 (ENSHBUG00000008023) #27 ENSHBUG00000008014 #28 ENSHBUG00000008005 #30 asic2 (ENSHBUG00000007991) ##30 MPP3 (ENSHBUG00000007938) ENSHBUG00000007768 #31 ZNF281 (ENSHBUG00000007749) #32 ENSHBUG00000007690 #33 tmem98 (ENSHBUG00000007681) #35 ENSHBUG00000007647 #36 ENSHBUG00000007590 Haplochromini_A ANCESTRAL SPECIES 14 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000174710 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00950000182812.B.a.a.o.a.b ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 P. nyererei MODERN SPECIES 313 ddx42 (ENSPNYG00000013954) #17 ENSPNYG00000013940 strada (ENSPNYG00000013907) #16 rnf113a (ENSPNYG00000013863) #15 ENSPNYG00000013843 #14 ENSPNYG00000013835 ENSPNYG00000013828 #13 RUNDC3A (ENSPNYG00000013759) #12 FAM117A (ENSPNYG00000013696) #11 slc35b1 (ENSPNYG00000013642) #10 ndufa4a (ENSPNYG00000013603) #9 spop (ENSPNYG00000013554) NXPH3 (ENSPNYG00000013519) NGFR (ENSPNYG00000013507) ENSPNYG00000013502 selenow2b (ENSPNYG00000013474) #22 slc4a1a (ENSPNYG00000013439) #23 ubtf (ENSPNYG00000013380) #24 ENSPNYG00000013327 tmub2 (ENSPNYG00000013305) #26 asb16 (ENSPNYG00000013298) #27 ENSPNYG00000013279 #28 ENSPNYG00000013269 #30 ENSPNYG00000013257 asic2 (ENSPNYG00000013229) ##30 MPP3 (ENSPNYG00000013196) ZNF281 (ENSPNYG00000013174) #32 ENSPNYG00000013167 #33 ENSPNYG00000013156 #33 tmem98 (ENSPNYG00000013142) #35 ENSPNYG00000013071 #36 Haplochromini_B ANCESTRAL SPECIES 21 ENSGT00940000165921 #21 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00950000182812.B.a.a.o.a.b ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 Eastern happy MODERN SPECIES 16 ddx42 (ENSACLG00000025113) #17 strada (ENSACLG00000025184) #16 rnf113a (ENSACLG00000025256) #15 RUNDC3A (ENSACLG00000025385) #12 ENSACLG00000025400 #14 ENSACLG00000025402 ENSACLG00000025403 #13 FAM117A (ENSACLG00000025413) #11 slc35b1 (ENSACLG00000025420) #10 ndufa4a (ENSACLG00000025435) #9 spop (ENSACLG00000025444) NXPH3 (ENSACLG00000025484) NGFR (ENSACLG00000025495) ENSACLG00000025507 ENSACLG00000025511 selenow2b (ENSACLG00000025513) #22 slc4a1a (ENSACLG00000025519) #23 ubtf (ENSACLG00000025572) #24 ENSACLG00000025625 tmub2 (ENSACLG00000025653) #26 asb16 (ENSACLG00000025656) #27 ENSACLG00000025662 #28 ENSACLG00000025668 #30 ENSACLG00000025677 asic2 (ENSACLG00000000027) ##30 MPP3 (ENSACLG00000000062) ENSACLG00000000105 #31 ZNF281 (ENSACLG00000000130) #32 ENSACLG00000000182 ENSACLG00000000189 #33 ENSACLG00000000213 ##37 Zebra mbuna MODERN SPECIES 1107 MAP3K3 (ENSMZEG00005023117) #19 limd2 (ENSMZEG00005023112) #18 ddx42 (ENSMZEG00005023103) #17 strada (ENSMZEG00005023094) #16 rnf113a (ENSMZEG00005023086) #15 ENSMZEG00005023082 #14 ENSMZEG00005023079 #13 RUNDC3A (ENSMZEG00005023078) #12 FAM117A (ENSMZEG00005023074) #11 slc35b1 (ENSMZEG00005023070) #10 ndufa4a (ENSMZEG00005023067) #9 spop (ENSMZEG00005023062) NXPH3 (ENSMZEG00005023056) NGFR (ENSMZEG00005023052) ENSMZEG00005023049 selenow2b (ENSMZEG00005023047) #22 slc4a1a (ENSMZEG00005023040) #23 ubtf (ENSMZEG00005023031) #24 ENSMZEG00005023025 tmub2 (ENSMZEG00005023020) #26 asb16 (ENSMZEG00005023018) #27 ENSMZEG00005023016 #28 ENSMZEG00005023014 #30 ENSMZEG00005023010 asic2 (ENSMZEG00005023005) ##30 MPP3 (ENSMZEG00005023002) ENSMZEG00005022999 #31 ZNF281 (ENSMZEG00005022997) #32 ENSMZEG00005022996 #33 tmem98 (ENSMZEG00005022995) #35 ENSMZEG00005022983 #36 Lyretail cichlid MODERN SPECIES 387 limd2 (ENSNBRG00000004508) #18 ddx42 (ENSNBRG00000004466) #17 strada (ENSNBRG00000004338) #16 rnf113a (ENSNBRG00000004314) #15 ENSNBRG00000004305 #14 ENSNBRG00000004298 ENSNBRG00000004295 #13 RUNDC3A (ENSNBRG00000004167) #12 ENSNBRG00000004146 #11 slc35b1 (ENSNBRG00000004123) #10 ndufa4a (ENSNBRG00000004018) #9 spop (ENSNBRG00000003973) NXPH3 (ENSNBRG00000003957) ENSNBRG00000003938 ENSNBRG00000003923 selenow2b (ENSNBRG00000003909) #22 ENSNBRG00000003894 slc4a1a (ENSNBRG00000003876) #23 ubtf (ENSNBRG00000003814) #24 atxn7l3a (ENSNBRG00000003768) #25 tmub2 (ENSNBRG00000003750) #26 asb16 (ENSNBRG00000003724) #27 ENSNBRG00000003660 #28 ENSNBRG00000003635 #30 asic2 (ENSNBRG00000003595) ##30 MPP3 (ENSNBRG00000003561) ENSNBRG00000003529 #32 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Percomorphaceae_D ANCESTRAL SPECIES 1 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Carangaria ANCESTRAL SPECIES 4 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Pleuronectoidei ANCESTRAL SPECIES 2 ENSGT00940000165921 #21 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 ENSGT00390000017613 ENSGT00390000017837.a.v Turbot MODERN SPECIES 10 ENSSMAG00000012689 RBFOX3 (ENSSMAG00000012618) ENSSMAG00000012597 ENSSMAG00000012518 ENSSMAG00000012442 ENSSMAG00000012449 ENSSMAG00000023265 FAM117A (ENSSMAG00000012429) #11 slc35b1 (ENSSMAG00000012406) #10 ndufa4a (ENSSMAG00000018128) #9 spop (ENSSMAG00000012241) ENSSMAG00000025110 NXPH3 (ENSSMAG00000012235) NGFR (ENSSMAG00000012202) ENSSMAG00000012187 selenow2b (ENSSMAG00000012167) #22 slc4a1a (ENSSMAG00000012131) #23 ubtf (ENSSMAG00000012016) #24 ENSSMAG00000011961 tmub2 (ENSSMAG00000012009) #26 asb16 (ENSSMAG00000011943) #27 ENSSMAG00000011904 #28 asic2 (ENSSMAG00000011371) ##30 ENSSMAG00000011253 ENSSMAG00000022986 #32 ENSSMAG00000011156 #33 tmem98 (ENSSMAG00000035913) #35 ENSSMAG00000010977 #36 ENSSMAG00000010962 retsat.2 (ENSSMAG00000010932) nmt1a (ENSSMAG00000010916) Tongue sole MODERN SPECIES 8 MAP3K3 (ENSCSEG00000021599) #19 limd2 (ENSCSEG00000021581) #18 ddx42 (ENSCSEG00000021574) #17 strada (ENSCSEG00000021572) #16 rnf113a (ENSCSEG00000021570) #15 ENSCSEG00000021569 #14 ENSCSEG00000021568 ENSCSEG00000021567 #13 RUNDC3A (ENSCSEG00000021566) #12 ENSCSEG00000021564 #11 slc35b1 (ENSCSEG00000021562) #10 ndufa4a (ENSCSEG00000021561) #9 ENSCSEG00000021559 NGFR (ENSCSEG00000021522) ENSCSEG00000021519 selenow2b (ENSCSEG00000021516) #22 slc4a1a (ENSCSEG00000021512) #23 ubtf (ENSCSEG00000021498) #24 ENSCSEG00000021494 tmub2 (ENSCSEG00000021492) #26 asb16 (ENSCSEG00000021489) #27 ENSCSEG00000021486 #28 ENSCSEG00000021483 #29 olfm2a (ENSCSEG00000021480) ZNF385C (ENSCSEG00000021383) dhx58 (ENSCSEG00000021382) mlx (ENSCSEG00000021380) FMNL1 (ENSCSEG00000021373) SRCIN1 (ENSCSEG00000021366) ENSCSEG00000021280 wnt9b (ENSCSEG00000021279) Carangaria_A ANCESTRAL SPECIES 28 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b.a ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b.g #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Seriola ANCESTRAL SPECIES 15 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263981 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00940000162556.A.a.b.a ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b.g #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Greater amberjack MODERN SPECIES 17 strada (ENSSDUG00000022236) #16 rnf113a (ENSSDUG00000022244) #15 RUNDC3A (ENSSDUG00000022256) #12 ENSSDUG00000022261 #14 ENSSDUG00000022264 ENSSDUG00000022266 FAM117A (ENSSDUG00000022268) #11 slc35b1 (ENSSDUG00000022272) #10 ndufa4a (ENSSDUG00000022275) #9 spop (ENSSDUG00000022277) NXPH3 (ENSSDUG00000022289) NGFR (ENSSDUG00000022292) ENSSDUG00000022294 ENSSDUG00000022296 ENSSDUG00000022299 selenow2b (ENSSDUG00000022302) #22 slc4a1a (ENSSDUG00000022306) #23 ubtf (ENSSDUG00000022331) #24 atxn7l3a (ENSSDUG00000022355) #25 tmub2 (ENSSDUG00000022375) #26 asb16 (ENSSDUG00000022376) #27 ENSSDUG00000022381 #28 ENSSDUG00000022393 #30 asic2 (ENSSDUG00000022395) ##30 MPP3 (ENSSDUG00000022409) ENSSDUG00000022432 #31 ZNF281 (ENSSDUG00000022438) #32 ENSSDUG00000022440 #33 tmem98 (ENSSDUG00000022445) #35 ENSSDUG00000022456 #36 ENSSDUG00000022505 Yellowtail amberjack MODERN SPECIES 1984 ENSSLDG00000005813 NGFR (ENSSLDG00000005798) ENSSLDG00000005786 selenow2b (ENSSLDG00000005764) #22 Barramundi perch MODERN SPECIES 152 limd2 (ENSLCAG00010005992) #18 ddx42 (ENSLCAG00010006017) #17 strada (ENSLCAG00010006108) #16 rnf113a (ENSLCAG00010006145) #15 RUNDC3A (ENSLCAG00010006173) #12 ENSLCAG00010006190 #14 ENSLCAG00010006193 ENSLCAG00010006196 #13 ENSLCAG00010006199 #11 slc35b1 (ENSLCAG00010006204) #10 ndufa4a (ENSLCAG00010006209) #9 spop (ENSLCAG00010006224) NXPH3 (ENSLCAG00010006245) NGFR (ENSLCAG00010006249) ENSLCAG00010006257 selenow2b (ENSLCAG00010006266) #22 slc4a1a (ENSLCAG00010006298) #23 ubtf (ENSLCAG00010006392) #24 ENSLCAG00010006414 tmub2 (ENSLCAG00010006418) #26 asb16 (ENSLCAG00010006422) #27 ENSLCAG00010006427 #28 ENSLCAG00010006432 #30 asic2 (ENSLCAG00010006437) ##30 Anabantaria ANCESTRAL SPECIES 6 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Zig-zag eel MODERN SPECIES 22 ENSMAMG00000021883 #19 limd2 (ENSMAMG00000027978) #18 ddx42 (ENSMAMG00000021888) #17 strada (ENSMAMG00000021891) #16 rnf113a (ENSMAMG00000021895) #15 ENSMAMG00000021900 #12 ENSMAMG00000021902 #14 ENSMAMG00000021903 #13 FAM117A (ENSMAMG00000021905) #11 ndufa4a (ENSMAMG00000027103) #9 spop (ENSMAMG00000024435) NXPH3 (ENSMAMG00000025415) NGFR (ENSMAMG00000021967) ENSMAMG00000021969 ENSMAMG00000028409 selenow2b (ENSMAMG00000021973) #22 slc4a1a (ENSMAMG00000021975) #23 ubtf (ENSMAMG00000021978) #24 atxn7l3a (ENSMAMG00000021987) #25 tmub2 (ENSMAMG00000022000) #26 asb16 (ENSMAMG00000022002) #27 ENSMAMG00000022005 #28 ENSMAMG00000022009 ENSMAMG00000022010 #30 asic2 (ENSMAMG00000022013) ##30 ENSMAMG00000022016 ENSMAMG00000022020 #31 ENSMAMG00000022024 #32 ENSMAMG00000022032 #33 tmem98 (ENSMAMG00000022034) #35 ENSMAMG00000026658 #36 Anabantoidei ANCESTRAL SPECIES 7 ENSGT00940000165921 #21 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 ENSGT00390000017613 Climbing perch MODERN SPECIES 21 limd2 (ENSATEG00000027118) #18 ddx42 (ENSATEG00000022920) #17 strada (ENSATEG00000029681) #16 rnf113a (ENSATEG00000022950) #15 ENSATEG00000022967 #12 ENSATEG00000022989 #14 ENSATEG00000022992 ENSATEG00000022994 #13 FAM117A (ENSATEG00000022997) #11 slc35b1 (ENSATEG00000023006) #10 ndufa4a (ENSATEG00000025791) #9 spop (ENSATEG00000026627) NXPH3 (ENSATEG00000029156) NGFR (ENSATEG00000023041) ENSATEG00000029254 selenow2b (ENSATEG00000023056) #22 slc4a1a (ENSATEG00000023071) #23 ubtf (ENSATEG00000023156) #24 ATXN7L3 (ENSATEG00000027229) tmub2 (ENSATEG00000023276) #26 asb16 (ENSATEG00000023280) #27 ENSATEG00000023285 #28 asic2 (ENSATEG00000023292) ##30 ENSATEG00000023295 ENSATEG00000023305 ENSATEG00000023310 #32 ENSATEG00000023318 #33 tmem98 (ENSATEG00000023323) #35 ENSATEG00000023333 #36 ENSATEG00000023370 retsat.2 (ENSATEG00000023412) Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 19 ccdc47 (ENSBSLG00000003952) DCAF7 (ENSBSLG00000003896) kcnh6a (ENSBSLG00000003761) #21 limd2 (ENSBSLG00000002990) #18 ddx42 (ENSBSLG00000002910) #17 strada (ENSBSLG00000002552) #16 rnf113a (ENSBSLG00000002381) #15 ENSBSLG00000002343 #14 ENSBSLG00000002328 ENSBSLG00000002317 #13 RUNDC3A (ENSBSLG00000002252) #12 ENSBSLG00000002163 #11 slc35b1 (ENSBSLG00000001723) #10 ndufa4a (ENSBSLG00000001686) #9 ENSBSLG00000019771 selenow2b (ENSBSLG00000019649) #22 slc4a1a (ENSBSLG00000019645) #23 ENSBSLG00000019639 #23 NGFR (ENSBSLG00000019634) NGFR (ENSBSLG00000019630) ENSBSLG00000019621 selenow2b (ENSBSLG00000019617) #22 slc4a1a (ENSBSLG00000018726) #23 ubtf (ENSBSLG00000017490) #24 atxn7l3a (ENSBSLG00000017326) #25 tmub2 (ENSBSLG00000017318) #26 asb16 (ENSBSLG00000017302) #27 ENSBSLG00000017248 #28 asic2 (ENSBSLG00000016744) ##30 MPP3 (ENSBSLG00000016378) ENSBSLG00000016357 #31 Siamese fighting fish MODERN SPECIES 19 rnf113a (ENSBSLG00000002381) #15 ENSBSLG00000002343 #14 ENSBSLG00000002328 ENSBSLG00000002317 #13 RUNDC3A (ENSBSLG00000002252) #12 ENSBSLG00000002163 #11 slc35b1 (ENSBSLG00000001723) #10 ndufa4a (ENSBSLG00000001686) #9 ENSBSLG00000019771 selenow2b (ENSBSLG00000019649) #22 slc4a1a (ENSBSLG00000019645) #23 ENSBSLG00000019639 #23 NGFR (ENSBSLG00000019634) NGFR (ENSBSLG00000019630) ENSBSLG00000019621 selenow2b (ENSBSLG00000019617) #22 slc4a1a (ENSBSLG00000018726) #23 ubtf (ENSBSLG00000017490) #24 atxn7l3a (ENSBSLG00000017326) #25 tmub2 (ENSBSLG00000017318) #26 asb16 (ENSBSLG00000017302) #27 ENSBSLG00000017248 #28 asic2 (ENSBSLG00000016744) ##30 MPP3 (ENSBSLG00000016378) ENSBSLG00000016357 #31 ZNF281 (ENSBSLG00000016355) #32 ENSBSLG00000016353 #33 tmem98 (ENSBSLG00000016351) #35 ENSBSLG00000016331 #36 ENSBSLG00000016322 retsat.2 (ENSBSLG00000016297) Eupercaria ANCESTRAL SPECIES 3 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Eupecaria_A ANCESTRAL SPECIES 5 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Eupecaria_B ANCESTRAL SPECIES ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Eupecaria_C ANCESTRAL SPECIES 25 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Eupercaria_incertae_sedis ANCESTRAL SPECIES 23 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00710000106813.B.a #31 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Large yellow croaker MODERN SPECIES 483 limd2 (ENSLCRG00005003687) #18 ddx42 (ENSLCRG00005003693) #17 strada (ENSLCRG00005003724) #16 rnf113a (ENSLCRG00005003735) #15 RUNDC3A (ENSLCRG00005003918) #12 ENSLCRG00005004082 #14 ENSLCRG00005004083 #13 FAM117A (ENSLCRG00005004085) #11 slc35b1 (ENSLCRG00005004094) #10 ndufa4a (ENSLCRG00005004097) #9 spop (ENSLCRG00005004099) NXPH3 (ENSLCRG00005004113) NGFR (ENSLCRG00005004114) ENSLCRG00005004115 ENSLCRG00005004116 selenow2b (ENSLCRG00005004118) #22 slc4a1a (ENSLCRG00005004134) #23 ubtf (ENSLCRG00005007204) #24 ENSLCRG00005007268 ENSLCRG00005007269 tmub2 (ENSLCRG00005007274) #26 asb16 (ENSLCRG00005007277) #27 ENSLCRG00005007280 #28 ENSLCRG00005007285 #30 asic2 (ENSLCRG00005007289) ##30 MPP3 (ENSLCRG00005007308) ENSLCRG00005007431 ENSLCRG00005007434 ZNF281 (ENSLCRG00005007435) #32 ENSLCRG00005007438 #33 tmem98 (ENSLCRG00005007442) #35 European seabass MODERN SPECIES 21 limd2 (ENSDLAG00005011484) #18 ddx42 (ENSDLAG00005011499) #17 strada (ENSDLAG00005011571) #16 rnf113a (ENSDLAG00005011707) #15 ENSDLAG00005011743 #12 ENSDLAG00005011932 #14 ENSDLAG00005011934 ENSDLAG00005011941 #13 FAM117A (ENSDLAG00005011944) #11 slc35b1 (ENSDLAG00005011977) #10 ENSDLAG00005027804 spop (ENSDLAG00005012058) NXPH3 (ENSDLAG00005012060) NGFR (ENSDLAG00005012065) ENSDLAG00005012077 selenow2b (ENSDLAG00005012081) #22 slc4a1a (ENSDLAG00005012126) #23 ubtf (ENSDLAG00005015760) #24 ENSDLAG00005016287 tmub2 (ENSDLAG00005016342) #26 asb16 (ENSDLAG00005016348) #27 ENSDLAG00005016358 #28 ENSDLAG00005016366 #30 asic2 (ENSDLAG00005016394) ##30 ENSDLAG00005017055 ENSDLAG00005030722 #31 ENSDLAG00005029714 #32 ENSDLAG00005017703 #33 tmem98 (ENSDLAG00005034210) #35 ENSDLAG00005017744 #36 retsat.2 (ENSDLAG00005018043) Gilthead seabream MODERN SPECIES 15 kcnh6a (ENSSAUG00010024541) #21 gfap (ENSSAUG00010024635) #20 MAP3K3 (ENSSAUG00010024637) #19 limd2 (ENSSAUG00010024673) #18 ddx42 (ENSSAUG00010024680) #17 strada (ENSSAUG00010024692) #16 rnf113a (ENSSAUG00010024843) #15 RUNDC3A (ENSSAUG00010024854) #12 FAM117A (ENSSAUG00010024859) #11 slc35b1 (ENSSAUG00010024861) #10 NDUFA4 (ENSSAUG00010024913) #9 spop (ENSSAUG00010024916) NXPH3 (ENSSAUG00010024922) ENSSAUG00010024923 ENSSAUG00010024925 selenow2b (ENSSAUG00010024926) #22 slc4a1a (ENSSAUG00010024983) #23 ubtf (ENSSAUG00010026035) #24 ENSSAUG00010026044 tmub2 (ENSSAUG00010011994) #26 asb16 (ENSSAUG00010011996) #27 ENSSAUG00010011999 #28 asic2 (ENSSAUG00010012013) ##30 MPP3 (ENSSAUG00010012740) ENSSAUG00010013575 #31 ZNF281 (ENSSAUG00010013577) #32 ENSSAUG00010013578 #33 tmem98 (ENSSAUG00010013579) #35 ENSSAUG00010013580 #36 ENSSAUG00010013585 retsat.2 (ENSSAUG00010013588) Perciformes ANCESTRAL SPECIES 1 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT01100000263610 #14 ENSGT00940000177150 ENSGT01100000263643 #13 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a.d ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT01050000245493 ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 Perciformes_a ANCESTRAL SPECIES 1 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00940000154376.a.a.d ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT01010000228294 ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000158253 #25 ENSGT00390000014069.b #26 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 ENSGT00390000017613 Pike perch MODERN SPECIES 35 limd2 (ENSSLUG00000020066) #18 ddx42 (ENSSLUG00000020081) #17 strada (ENSSLUG00000020115) #16 rnf113a (ENSSLUG00000020241) #15 RUNDC3A (ENSSLUG00000020264) #12 ENSSLUG00000020302 #14 ENSSLUG00000020304 #13 FAM117A (ENSSLUG00000005353) #11 slc35b1 (ENSSLUG00000005412) #10 ndufa4a (ENSSLUG00000005761) #9 spop (ENSSLUG00000005769) NXPH3 (ENSSLUG00000005780) NGFR (ENSSLUG00000005786) ENSSLUG00000005801 ENSSLUG00000005814 selenow2b (ENSSLUG00000005817) #22 slc4a1a (ENSSLUG00000005887) #23 ubtf (ENSSLUG00000006660) #24 atxn7l3a (ENSSLUG00000008615) #25 tmub2 (ENSSLUG00000008624) #26 asb16 (ENSSLUG00000008631) #27 ENSSLUG00000008643 #28 asic2 (ENSSLUG00000008655) ##30 MPP3 (ENSSLUG00000008728) ZNF281 (ENSSLUG00000009419) #32 ENSSLUG00000009423 #33 tmem98 (ENSSLUG00000009429) #35 ENSSLUG00000009435 #36 ENSSLUG00000009447 #36 ENSSLUG00000009475 retsat.2 (ENSSLUG00000009485) Tetraodontidae ANCESTRAL SPECIES 8 ENSGT00940000165921 #21 ENSGT00940000159539 #20 ENSGT00940000158767 #19 ENSGT00940000158377.a #18 ENSGT00940000156559 #17 ENSGT00940000158827 #16 ENSGT00390000016292 #15 ENSGT00940000158922.d #12 ENSGT00950000183046.a.b.l #11 ENSGT00940000157900 #10 ENSGT00940000154268.k.a #9 ENSGT00950000182883.a.a.a ENSGT00730000110974.a ENSGT00940000162556.D.a.b ENSGT00940000162556.G.d ENSGT00390000010440.h #22 ENSGT00940000157423.a.a #23 ENSGT00940000166349 #24 ENSGT00940000167574 ENSGT00940000160773 #27 ENSGT00400000022305 #28 ENSGT00940000154991.a.b #30 ENSGT00940000154991.a.a ##30 ENSGT00940000157190.c ENSGT00940000161586.c #32 ENSGT01080000257365.b.a.a.b.b.f #33 ENSGT00390000012062 #35 ENSGT00940000166828 #36 ENSGT00940000166962 ENSGT00390000017613 ENSGT00390000017837.a.v Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 TAAR1 (ENSTNIG00000000404) ENSTNIG00000004194 nr1h5 (ENSTNIG00000004195) slc66a1 (ENSTNIG00000004196) trim33 (ENSTNIG00000004197) ENSTNIG00000004198 ENSTNIG00000004199 ENSTNIG00000000820 ssr1 (ENSTNIG00000003328) ezh2 (ENSTNIG00000002191) ttl (ENSTNIG00000004207) ENSTNIG00000001509 ENSTNIG00000000669 nhp2 (ENSTNIG00000004219) ENSTNIG00000004220 MIEN1 (ENSTNIG00000004221) #22 slc4a1a (ENSTNIG00000004273) #23 ENSTNIG00000004229 ENSTNIG00000004230 GABRR2 (ENSTNIG00000004231) ENSTNIG00000004232 eif3eb (ENSTNIG00000004238) ENSTNIG00000004239 ENSTNIG00000004240 ENSTNIG00000004241 stx3a (ENSTNIG00000004243) pknox1.1 (ENSTNIG00000004244) ENSTNIG00000004245 ENSTNIG00000001053 wdr4 (ENSTNIG00000004246) noto (ENSTNIG00000004247) Tetraodon MODERN SPECIES 26 ENSTNIG00000000849 ENSTNIG00000000829 mtap (ENSTNIG00000004333) brd4 (ENSTNIG00000004330) LPAR2 (ENSTNIG00000004329) pfn2a (ENSTNIG00000004310) rnf13 (ENSTNIG00000004309) bpnt2 (ENSTNIG00000001741) ENSTNIG00000004308 fam107b (ENSTNIG00000004306) gcsha (ENSTNIG00000004305) ENSTNIG00000004304 nav3 (ENSTNIG00000004292) dnaaf1 (ENSTNIG00000004277) ENSTNIG00000004275 selenow2b (ENSTNIG00000004274) #22 slc4a1a (ENSTNIG00000004222) #23 ENSTNIG00000004272 ubtf (ENSTNIG00000004271) #24 ENSTNIG00000004270 tmub2 (ENSTNIG00000004269) #26 asb16 (ENSTNIG00000004268) #27 ENSTNIG00000004267 #28 ENSTNIG00000004266 #30 GBF1 (ENSTNIG00000004265) macroh2a2 (ENSTNIG00000004264) ist1 (ENSTNIG00000004263) ENSTNIG00000004262 ENSTNIG00000004261 mcee (ENSTNIG00000000800) FTH1 (ENSTNIG00000004260) Fugu MODERN SPECIES 17 limd2 (ENSTRUG00000022099) #18 ddx42 (ENSTRUG00000010711) #17 strada (ENSTRUG00000011020) #16 rnf113a (ENSTRUG00000011142) #15 ENSTRUG00000020260 ENSTRUG00000024206 #13 RUNDC3A (ENSTRUG00000011302) #12 ENSTRUG00000011482 #11 slc35b1 (ENSTRUG00000011550) #10 ndufa4a (ENSTRUG00000001634) #9 ENSTRUG00000028936 NXPH3 (ENSTRUG00000029641) NGFR (ENSTRUG00000026109) ENSTRUG00000031484 ENSTRUG00000020422 selenow2b (ENSTRUG00000023497) #22 slc4a1a (ENSTRUG00000016704) #23 ubtf (ENSTRUG00000016692) #24 ENSTRUG00000016684 asb16 (ENSTRUG00000016674) #27 ENSTRUG00000024866 #28 asic2 (ENSTRUG00000016649) ##30 MPP3 (ENSTRUG00000016624) ENSTRUG00000031279 ENSTRUG00000027431 ZNF281 (ENSTRUG00000029423) #32 ENSTRUG00000016607 #33 tmem98 (ENSTRUG00000016603) #35 ENSTRUG00000029046 #36 ENSTRUG00000031410 nmt1a (ENSTRUG00000016574) Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 81 MAP3K3 (ENSHCOG00000003256) #19 limd2 (ENSHCOG00000003270) #18 ddx42 (ENSHCOG00000003357) #17 strada (ENSHCOG00000003391) #16 rnf113a (ENSHCOG00000003421) #15 ENSHCOG00000003428 #14 ENSHCOG00000003431 #13 RUNDC3A (ENSHCOG00000003443) #12 slc35b1 (ENSHCOG00000003513) #10 ENSHCOG00000003524 #11 slc35b1 (ENSHCOG00000003541) #10 ndufa4a (ENSHCOG00000003552) #9 NXPH3 (ENSHCOG00000003568) ENSHCOG00000003575 ENSHCOG00000003581 selenow2b (ENSHCOG00000003584) #22 ENSHCOG00000003612 slc4a1a (ENSHCOG00000003654) #23 ubtf (ENSHCOG00000003715) #24 ENSHCOG00000003785 tmub2 (ENSHCOG00000003806) #26 asb16 (ENSHCOG00000003849) #27 ENSHCOG00000003875 #28 asic2 (ENSHCOG00000003900) ##30 MPP3 (ENSHCOG00000004051) ENSHCOG00000004079 #31 ENSHCOG00000004100 #32 ENSHCOG00000000110 ##33 ENSHCOG00000004120 ##33 tmem98 (ENSHCOG00000004128) #35 ENSHCOG00000004162 #36 Tiger tail seahorse MODERN SPECIES 862 selenow2b (ENSHCOG00000019291) #22 Pinecone sodierfish MODERN SPECIES 22 gfap (ENSMMDG00005016480) #20 MAP3K3 (ENSMMDG00005016475) #19 limd2 (ENSMMDG00005016471) #18 ddx42 (ENSMMDG00005016410) #17 strada (ENSMMDG00005016206) #16 rnf113a (ENSMMDG00005016193) #15 ENSMMDG00005016189 ENSMMDG00005016186 #13 RUNDC3A (ENSMMDG00005016184) #12 FAM117A (ENSMMDG00005016179) #11 slc35b1 (ENSMMDG00005016177) #10 ndufa4a (ENSMMDG00005016172) #9 spop (ENSMMDG00005016171) NXPH3 (ENSMMDG00005016169) NGFR (ENSMMDG00005016074) selenow2b (ENSMMDG00005016073) #22 slc4a1a (ENSMMDG00005016070) #23 ubtf (ENSMMDG00005015512) #24 ENSMMDG00005015488 tmub2 (ENSMMDG00005015487) #26 asb16 (ENSMMDG00005015484) #27 ENSMMDG00005015483 #28 ENSMMDG00005015481 #30 ENSMMDG00005015479 asic2 (ENSMMDG00005015478) ##30 MPP3 (ENSMMDG00005015467) ZNF281 (ENSMMDG00005015462) #32 ENSMMDG00005015459 #33 tmem98 (ENSMMDG00005015456) #35 ENSMMDG00005015449 #36 ENSMMDG00005015440 Cod MODERN SPECIES 11 dcaf7 (ENSGMOG00000017164) gfap (ENSGMOG00000004683) #20 ENSGMOG00000004640 #19 limd2 (ENSGMOG00000026647) #18 ddx42 (ENSGMOG00000004595) #17 strada (ENSGMOG00000031870) #16 rnf113a (ENSGMOG00000004541) #15 ENSGMOG00000004523 #12 ENSGMOG00000008257 #14 ENSGMOG00000035374 ENSGMOG00000026122 slc35b1 (ENSGMOG00000004458) #10 ndufa4a (ENSGMOG00000030235) #9 ENSGMOG00000006614 ENSGMOG00000026497 selenow2b (ENSGMOG00000036715) #22 slc4a1a (ENSGMOG00000001567) #23 ubtf (ENSGMOG00000001531) #24 atxn7l3a (ENSGMOG00000001510) #25 tmub2 (ENSGMOG00000035569) #26 asb16 (ENSGMOG00000032035) #27 ENSGMOG00000028699 #28 asic2 (ENSGMOG00000017812) ##30 ENSGMOG00000008887 ENSGMOG00000029197 ENSGMOG00000033655 #32 ENSGMOG00000008844 ##33 ENSGMOG00000026968 tmem98 (ENSGMOG00000036666) #35 ENSGMOG00000017934 #36 ENSGMOG00000017917