Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00390000010440.g.a #22
Protacanthopterygii	ANCESTRAL SPECIES	8	ENSGT00940000156559	ENSGT00940000158827	ENSGT00390000016292	ENSGT00980000200496	ENSGT01090000260346	ENSGT00940000158922.d	ENSGT00940000164651.b	ENSGT00950000183046.a.b.l	ENSGT00940000157900	ENSGT00940000154268.l	ENSGT00940000154376.a.a	ENSGT00950000182883.a.a.a	ENSGT00730000110974.a #19	ENSGT00940000162556.G.d.h #20	ENSGT00390000010440.g.b #21	ENSGT00390000010440.g.a #22	ENSGT00940000157423.a.a #23	ENSGT00940000166349 #24	ENSGT00940000158253 #25	ENSGT00390000014069.b #26	ENSGT00940000160773 #27	ENSGT00400000022305 #28	ENSGT00940000154991.a.b #29	ENSGT00940000154991.a.a ##29	ENSGT00390000001488	ENSGT00980000199397	ENSGT00390000004692.d.a.n	ENSGT00940000163111.a.a	ENSGT00530000063936.a.b	ENSGT00950000182886.a.a.b.t	ENSGT00940000164566.b
Salmoninae	ANCESTRAL SPECIES		ENSGT00390000016292.d	ENSGT00940000158827.bb	ENSGT00390000016292.c.a	ENSGT00980000200496.b	ENSGT01090000260346.b.b	ENSGT00940000158922.d	ENSGT00940000164651.b	ENSGT00950000183046.a.b.l	ENSGT00940000157900.m	ENSGT00940000154268.l.b	ENSGT00940000154376.a.a	ENSGT00950000182883.a.a.a	ENSGT00730000110974.a #19	ENSGT00940000162556.G.d.h #20	ENSGT00390000010440.g.b.a.b ##22	ENSGT00390000010440.g.a #22	ENSGT00940000157423.a.a #23	ENSGT00940000166349 #24	ENSGT00940000158253 #25	ENSGT00390000014069.b #26	ENSGT00940000160773.f.a ##27	ENSGT00400000022305.g.b ##28	ENSGT00940000160773.f.b #27	ENSGT00400000022305.g.a #28	ENSGT00940000154991.a.b #29	ENSGT00940000154991.a.a ##29	ENSGT00940000158693.A.f	ENSGT00390000001488	ENSGT00940000154394.b.a.a.b.a.b.c.b.b	ENSGT00940000163111.a.a	ENSGT00530000063936.a.b
Salmoninae_a	ANCESTRAL SPECIES	37	ENSGT00940000158377.a.c	ENSGT00940000158827.bb	ENSGT00390000016292.c.a	ENSGT00980000200496.b	ENSGT00940000158922.d	ENSGT00940000164651.b	ENSGT00950000183046.a.b.l.h	ENSGT00940000157900.m	ENSGT00940000154268.l.b	ENSGT00940000154376.a.a	ENSGT00950000182883.a.a.a	ENSGT00730000110974.a.i #19	ENSGT00940000162556.G.d.h #20	ENSGT00390000010440.g.b.a.a #21	ENSGT00390000010440.g.b.a.b ##22	ENSGT00390000010440.g.a #22	ENSGT00940000157423.a.a #23	ENSGT00940000166349 #24	ENSGT00940000158253 #25	ENSGT00390000014069.b #26	ENSGT00940000160773.f.a ##27	ENSGT00400000022305.g.b ##28	ENSGT00940000160773.f.b #27	ENSGT00400000022305.g.a #28	ENSGT00940000154991.a.b #29	ENSGT00940000154991.a.a ##29	ENSGT00940000158693.A.f	ENSGT00390000001488	ENSGT00940000154394.b.a.a.b.a.b.c.b.b.b	ENSGT00940000154394.b.a.a.b.a.b.c.b.a	ENSGT00980000199397.a.b
Oncorhynchus	ANCESTRAL SPECIES	162														ENSGT00730000110974.a.j ##19	ENSGT00390000010440.g.b.a.b ##22	ENSGT00390000010440.g.a #22	ENSGT00940000157423.a.a.p ##23	ENSGT00940000166349.i.a ##24	ENSGT00940000158253.yc.a #25	ENSGT00390000014069.b.e ##26	ENSGT00940000160773.f.a ##27	ENSGT00400000022305.g.b ##28	ENSGT00940000154991.a.a.f ##29	ENSGT00940000158693.A.f
Oncorhynchus_a	ANCESTRAL SPECIES	243													ENSGT00730000110974.a.i.a ##19	ENSGT00940000162556.G.d.h.b.a ##20	ENSGT00390000010440.g.b.a.b ##22	ENSGT00390000010440.g.a #22	ENSGT00940000157423.a.a.p ##23	ENSGT00940000166349.i.a ##24	ENSGT00940000158253.yc.a #25	ENSGT00390000014069.b.e ##26	ENSGT00940000160773.f.a ##27
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	85													NGFR (ENSOTSG00005037616) #19	ENSOTSG00005037619 #20	MIEN1 (ENSOTSG00005037621) #21	selenow2a (ENSOTSG00005037623) #22	slc4a1a (ENSOTSG00005037627) #23	ubtf (ENSOTSG00005037680) #24	atxn7l3a (ENSOTSG00005037752) #25	tmub2 (ENSOTSG00005037753) #26	asb16 (ENSOTSG00005037754) #27	ENSOTSG00005037755 #28	ENSOTSG00005037756 #29
Chinook salmon	MODERN SPECIES	239													NGFR (ENSOTSG00005038244) ##19	ENSOTSG00005038246 ##20	MIEN1 (ENSOTSG00005038248) ##22	selenow2a (ENSOTSG00005038251) ##22	slc4a1a (ENSOTSG00005038255) ##23	ubtf (ENSOTSG00005038330) ##24	ENSOTSG00005039831	atxn7l3a (ENSOTSG00005039833) ##25	tmub2 (ENSOTSG00005039838) ##26	asb16 (ENSOTSG00005039841) ##27	ENSOTSG00005039842 ##28	ENSOTSG00005039843 ##29
Coho salmon	MODERN SPECIES	26	strada (ENSOKIG00005032199)	rnf113a (ENSOKIG00005033056)	RUNDC3A (ENSOKIG00005033098)	ENSOKIG00005033537	ENSOKIG00005033543	ENSOKIG00005033550	FAM117A (ENSOKIG00005033565)	slc35b1 (ENSOKIG00005033631)	ENSOKIG00005033755	spop (ENSOKIG00005033765)	NGFR (ENSOKIG00005033821) ##19	ENSOKIG00005033847	ENSOKIG00005033854 ##20	ENSOKIG00005033869 ##20	MIEN1 (ENSOKIG00005033874) ##22	selenow2a (ENSOKIG00005033900) #22	slc4a1a (ENSOKIG00005033939) ##23	ubtf (ENSOKIG00005034233) ##24	ENSOKIG00005034716	atxn7l3a (ENSOKIG00005034724) #25	tmub2 (ENSOKIG00005034749) ##26	asb16 (ENSOKIG00005034758) ##27	ENSOKIG00005034763 ##28	ENSOKIG00005034772 ##29	ASIC2 (ENSOKIG00005034821) ##29	ENSOKIG00005035054	ENSOKIG00005035078	RRN3 (ENSOKIG00005035508)	ENSOKIG00005035692	ENSOKIG00005035709	ENSOKIG00005035739
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	3	limd2 (ENSOMYG00000006198)	ddx42 (ENSOMYG00000006634)	rnf113a (ENSOMYG00000007366)	strada (ENSOMYG00000007099)	ENSOMYG00000007417	ENSOMYG00000007446	ENSOMYG00000007469	ENSOMYG00000007481	ENSOMYG00000007511	slc35b1 (ENSOMYG00000007708)	ENSOMYG00000065517	spop (ENSOMYG00000007883)	NXPH3 (ENSOMYG00000007928)	NGFR (ENSOMYG00000007962) ##19	ENSOMYG00000008010 ##22	selenow2a (ENSOMYG00000069176) #22	slc4a1a (ENSOMYG00000008303) ##23	ubtf (ENSOMYG00000008651) ##24	atxn7l3a (ENSOMYG00000008839) #25	tmub2 (ENSOMYG00000054590) ##26	asb16 (ENSOMYG00000008866) ##27	ENSOMYG00000008901 ##28	ENSOMYG00000075912	ENSOMYG00000071360 #29	ENSOMYG00000009033 ##29	ENSOMYG00000009127	ENSOMYG00000009362	ENSOMYG00000009543	ENSOMYG00000058131	ENSOMYG00000072635	ENSOMYG00000066848
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000005959	ENSOMYG00000006091	ENSOMYG00000006102	ENSOMYG00000006123	FAM117A (ENSOMYG00000006145)	slc35b1 (ENSOMYG00000006195)	ndua4 (ENSOMYG00000007771)	spop (ENSOMYG00000006388)	ENSOMYG00000057878	NXPH3 (ENSOMYG00000006479)	ENSOMYG00000077469	NGFR (ENSOMYG00000006619) #19	ENSOMYG00000070398	ENSOMYG00000006655 #20	ENSOMYG00000051649 #21	selenow2a (ENSOMYG00000006692) #22	slc4a1a (ENSOMYG00000006966) #23	ubtf (ENSOMYG00000007387) #24	atxn7l3a (ENSOMYG00000007563) ##25	tmub2 (ENSOMYG00000007616) #26	asb16 (ENSOMYG00000007634) ##27	ENSOMYG00000007658 ##28	ENSOMYG00000065520 ##29	ENSOMYG00000007815 ##29	ENSOMYG00000008272	ENSOMYG00000008416	ENSOMYG00000017359	ENSOMYG00000065234	ENSOMYG00000077206	asf1ba (ENSOMYG00000008551)	prkacaa (ENSOMYG00000009245)
Salmo	ANCESTRAL SPECIES	219																ENSGT00390000010440.g.a #22	ENSGT00940000157423.a.a.m #23	ENSGT00940000166349.g.a #24	ENSGT00940000158253.ad.a #25	ENSGT00390000014069.b.g #26	ENSGT00940000160773.e.a ##27	ENSGT00400000022305.g.b ##28	ENSGT00940000154991.a.b #29	ENSGT00400000022305.h ##28	ENSGT00940000154991.a.a.g ##29	ENSGT00940000158693.A.f	ENSGT00390000001488.p
Atlantic salmon	MODERN SPECIES	22	gfap (ENSSSAG00000045892)	ENSSSAG00000001385	ddx42 (ENSSSAG00000001177)	ENSSSAG00000001102	rnf113a (ENSSSAG00000040392)	ENSSSAG00000114487	ENSSSAG00000001029	ENSSSAG00000001023	FAM117A (ENSSSAG00000001000)	s35b1 (ENSSSAG00000000988)	spop (ENSSSAG00000000960)	NXPH3 (ENSSSAG00000100957)	NGFR (ENSSSAG00000099650) ##19	ENSSSAG00000121971	ENSSSAG00000102819 ##20	selenow2a (ENSSSAG00000091831) #22	slc4a1a (ENSSSAG00000001877) #23	ubtf (ENSSSAG00000047681) #24	atxn7l3a (ENSSSAG00000010897) #25	tmub2 (ENSSSAG00000092439) #26	asb16 (ENSSSAG00000003381) ##27	ENSSSAG00000001752 ##28	ENSSSAG00000001986 ##29	ENSSSAG00000001964	ENSSSAG00000115856	ENSSSAG00000001933	ENSSSAG00000108890	ENSSSAG00000119563	ENSSSAG00000109863	ENSSSAG00000106784	prkacaa (ENSSSAG00000091909)
River trout	MODERN SPECIES	25	limd2 (ENSSTUG00000010876)	ddx42 (ENSSTUG00000010932)	strada (ENSSTUG00000010993)	rnf113a (ENSSTUG00000011287)	RUNDC3A (ENSSTUG00000011397)	ENSSTUG00000011469	ENSSTUG00000011472	ENSSTUG00000011481	FAM117A (ENSSTUG00000011495)	slc35b1 (ENSSTUG00000011509)	NDUFA4 (ENSSTUG00000011529)	NXPH3 (ENSSTUG00000011547)	NGFR (ENSSTUG00000011551) #19	ENSSTUG00000011574 ##20	MIEN1 (ENSSTUG00000011587) ##22	selenow2a (ENSSTUG00000011618) #22	slc4a1a (ENSSTUG00000011652) #23	ENSSTUG00000011836	ubtf (ENSSTUG00000011856) #24	ENSSTUG00000012160	atxn7l3a (ENSSTUG00000012169) #25	tmub2 (ENSSTUG00000012226) #26	asb16 (ENSSTUG00000012239) ##27	ENSSTUG00000012247 ##28	ENSSTUG00000012253 #29	ENSSTUG00000012259	asic2 (ENSSTUG00000012265) ##29	trpm4a (ENSSTUG00000012285)	RRN3 (ENSSTUG00000036705)	ENSSTUG00000037293	ENSSTUG00000037298
Northern pike	MODERN SPECIES	10	ddx42 (ENSELUG00000020593)	strada (ENSELUG00000020637)	rnf113a (ENSELUG00000020657)	ENSELUG00000020665	ENSELUG00000020675	RUNDC3A (ENSELUG00000020709)	ENSELUG00000020723	slc35b1 (ENSELUG00000020756)	ENSELUG00000020792	spop (ENSELUG00000021725)	NXPH3 (ENSELUG00000021845)	ENSELUG00000021850	NGFR (ENSELUG00000021915) #19	ENSELUG00000021930 #20	MIEN1 (ENSELUG00000021956) #21	selenow2a (ENSELUG00000021964) #22	slc4a1a (ENSELUG00000021990) #23	ubtf (ENSELUG00000022011) #24	atxn7l3a (ENSELUG00000022068) #25	tmub2 (ENSELUG00000022078) #26	asb16 (ENSELUG00000022103) #27	ENSELUG00000022131 #28	ENSELUG00000022146 #29	asic2 (ENSELUG00000022180) ##29	RRN3 (ENSELUG00000022239)	ENSELUG00000022251	ENSELUG00000026953	ENSELUG00000031082	ENSELUG00000022300	ENSELUG00000032997	asf1ba (ENSELUG00000022338)