Sauria ANCESTRAL SPECIES 1 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 ENSGT00940000177852 #35 Archelosauria ANCESTRAL SPECIES 1 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 ENSGT00940000177852 #35 Cryptodira ANCESTRAL SPECIES 1 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432.jb.a #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000177852 #35 ENSGT00940000162520.d #36 ENSGT00950000182945.b.a.a.b.b.b #37 Testudinoidea ANCESTRAL SPECIES 12 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219.a #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432.jb.a #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000177852 #35 ENSGT00940000162520.d #36 ENSGT00940000164003 Emydidae ANCESTRAL SPECIES 8 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219.a #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432.jb.a #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000153446.b.s #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00940000164003 ENSGT00950000182945.b.a.a.b.b.b #37 painted turtle MODERN SPECIES 2390 KCNF1 (ENSCPBG00000014030) C2orf50 (ENSCPBG00000014027) #7 SLC66A3 (ENSCPBG00000014025) #8 ROCK2 (ENSCPBG00000014009) #9 E2F6 (ENSCPBG00000014007) #10 GREB1 (ENSCPBG00000014004) #11 LPIN1 (ENSCPBG00000014000) #12 TRIB2 (ENSCPBG00000013994) #13 LRATD1 (ENSCPBG00000013990) #14 NBAS (ENSCPBG00000013977) #15 DDX1 (ENSCPBG00000013330) #16 ENSCPBG00000013321 #17 CYRIA (ENSCPBG00000013312) #18 VSNL1 (ENSCPBG00000013304) #20 SMC6 (ENSCPBG00000013302) #21 GEN1 (ENSCPBG00000013299) #22 MSGN1 (ENSCPBG00000013298) #23 ENSCPBG00000013295 #24 KCNS3 (ENSCPBG00000013292) #25 RDH14 (ENSCPBG00000013290) #26 NT5C1B (ENSCPBG00000013288) #27 ENSCPBG00000013282 OSR1 (ENSCPBG00000013280) #28 Three-toed box turtle MODERN SPECIES 15 C2orf50 (ENSTMTG00000002318) #7 ROCK2 (ENSTMTG00000002325) #9 E2F6 (ENSTMTG00000002335) #10 GREB1 (ENSTMTG00000002344) #11 ENSTMTG00000002372 LPIN1 (ENSTMTG00000002382) #12 TRIB2 (ENSTMTG00000002404) #13 LRATD1 (ENSTMTG00000002408) #14 NBAS (ENSTMTG00000002506) #15 DDX1 (ENSTMTG00000003436) #16 ENSTMTG00000003512 #17 CYRIA (ENSTMTG00000003533) #18 RAD51AP2 (ENSTMTG00000003579) #19 VSNL1 (ENSTMTG00000003601) #20 SMC6 (ENSTMTG00000003697) #21 GEN1 (ENSTMTG00000004477) #22 MSGN1 (ENSTMTG00000004516) #23 KCNS3 (ENSTMTG00000004528) #25 RDH14 (ENSTMTG00000004538) #26 NT5C1B (ENSTMTG00000004549) #27 ENSTMTG00000005639 OSR1 (ENSTMTG00000005645) #28 ENSTMTG00000005663 #29 TTC32 (ENSTMTG00000005737) #30 WDR35 (ENSTMTG00000005747) #31 ENSTMTG00000005813 #32 SDC1 (ENSTMTG00000005833) #33 PUM2 (ENSTMTG00000005851) #34 ENSTMTG00000005951 #36 ENSTMTG00000006051 RHOB (ENSTMTG00000006061) #37 Testudinidae ANCESTRAL SPECIES 10 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219.a #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432.jb.a #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000177852 #35 ENSGT00940000162520.d #36 ENSGT00940000164003 ENSGT00950000182945.b.a.a.b.b.b #37 ENSGT00390000013092 Goode s thornscrub tortoise MODERN SPECIES 17 ROCK2 (ENSGEVG00005007467) #9 E2F6 (ENSGEVG00005007439) #10 GREB1 (ENSGEVG00005007324) #11 LPIN1 (ENSGEVG00005007279) #12 ENSGEVG00005007261 TRIB2 (ENSGEVG00005007232) #13 LRATD1 (ENSGEVG00005007216) #14 ENSGEVG00005007207 NBAS (ENSGEVG00005006521) #15 DDX1 (ENSGEVG00005006272) #16 ENSGEVG00005006200 #17 CYRIA (ENSGEVG00005006179) #18 RAD51AP2 (ENSGEVG00005006144) #19 VSNL1 (ENSGEVG00005006120) #20 SMC6 (ENSGEVG00005006087) #21 GEN1 (ENSGEVG00005006047) #22 MSGN1 (ENSGEVG00005006020) #23 KCNS3 (ENSGEVG00005006009) #25 RDH14 (ENSGEVG00005005984) #26 NT5C1B (ENSGEVG00005005960) #27 OSR1 (ENSGEVG00005005926) #28 TTC32 (ENSGEVG00005005918) #30 WDR35 (ENSGEVG00005005855) #31 LAPTM4A (ENSGEVG00005005801) #32 ENSGEVG00005005777 #33 PUM2 (ENSGEVG00005005679) #34 ENSGEVG00005005576 #36 ENSGEVG00005005556 RHOB (ENSGEVG00005005543) #37 HS1BP3 (ENSGEVG00005005524) ENSGEVG00005005503 Abingdon island giant tortoise MODERN SPECIES 335 RAD51AP2 (ENSCABG00000003740) #19 VSNL1 (ENSCABG00000003727) #20 SMC6 (ENSCABG00000001660) #21 ENSCABG00000001600 #22 Chinese turtle MODERN SPECIES 2214 ENSPSIG00000012297 #15 DDX1 (ENSPSIG00000012292) #16 MYCN (ENSPSIG00000012289) #17 CYRIA (ENSPSIG00000012167) #18 ENSPSIG00000012137 #19 ENSPSIG00000001849 VSNL1 (ENSPSIG00000012117) #20 SMC6 (ENSPSIG00000012096) #21 GEN1 (ENSPSIG00000011938) #22 MSGN1 (ENSPSIG00000001846) #23 ENSPSIG00000011815 #24 KCNS3 (ENSPSIG00000001843) #25 RDH14 (ENSPSIG00000001840) #26 NT5C1B (ENSPSIG00000011766) #27 OSR1 (ENSPSIG00000011751) #28 ENSPSIG00000011721 #29 TTC32 (ENSPSIG00000011713) #30 WDR35 (ENSPSIG00000011703) #31 LAPTM4A (ENSPSIG00000011641) #32 SDC1 (ENSPSIG00000011638) #33 PUM2 (ENSPSIG00000011626) #34 ENSPSIG00000011571 #36 ENSPSIG00000001835 RHOB (ENSPSIG00000011554) #37 Archosauria ANCESTRAL SPECIES 3 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 Aves ANCESTRAL SPECIES 10 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 Neognathae ANCESTRAL SPECIES 2 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 Galloanserae ANCESTRAL SPECIES 2 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 Anatidae ANCESTRAL SPECIES ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 Pink-footed goose MODERN SPECIES 171 CYRIA (ENSABRG00000014109) #18 ENSABRG00000014137 #19 VSNL1 (ENSABRG00000014146) #20 SMC6 (ENSABRG00000014152) #21 GEN1 (ENSABRG00000014167) #22 MSGN1 (ENSABRG00000014179) #23 ENSABRG00000014184 #24 KCNS3 (ENSABRG00000014206) #25 RDH14 (ENSABRG00000014216) #26 NT5C1B (ENSABRG00000014218) #27 Duck MODERN SPECIES 21 UFL1 (ENSAPLG00000005301) FHL5 (ENSAPLG00000005672) GPR63 (ENSAPLG00000001077) NDUFAF4 (ENSAPLG00000005892) KLHL32 (ENSAPLG00000005979) MMS22L (ENSAPLG00000006108) TRIB2 (ENSAPLG00000013170) #13 LRATD1 (ENSAPLG00000011566) #14 NBAS (ENSAPLG00000012361) #15 DDX1 (ENSAPLG00000011093) #16 MYCN (ENSAPLG00000009825) #17 CYRIA (ENSAPLG00000009498) #18 ENSAPLG00000025611 #19 VSNL1 (ENSAPLG00000010558) #20 SMC6 (ENSAPLG00000008910) #21 GEN1 (ENSAPLG00000008596) #22 MSGN1 (ENSAPLG00000001852) #23 ENSAPLG00000008127 #24 KCNS3 (ENSAPLG00000001833) #25 RDH14 (ENSAPLG00000008116) #26 NT5C1B (ENSAPLG00000008001) #27 OSR1 (ENSAPLG00000007971) #28 ENSAPLG00000007727 #29 TTC32 (ENSAPLG00000007719) #30 WDR35 (ENSAPLG00000007231) #31 MATN3 (ENSAPLG00000006850) LAPTM4A (ENSAPLG00000006688) #32 ENSAPLG00000019338 SDC1 (ENSAPLG00000010484) #33 PUM2 (ENSAPLG00000010496) #34 ENSAPLG00000011262 #36 Phasianidae ANCESTRAL SPECIES 3 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734.ab #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00940000164003 Japanese quail MODERN SPECIES 21 SLC66A3 (ENSCJPG00005011053) #8 ROCK2 (ENSCJPG00005011054) #9 E2F6 (ENSCJPG00005011055) #10 ENSCJPG00005011056 GREB1 (ENSCJPG00005011057) #11 LPIN1 (ENSCJPG00005011058) #12 TRIB2 (ENSCJPG00005011061) #13 LRATD1 (ENSCJPG00005011069) #14 NBAS (ENSCJPG00005011080) #15 DDX1 (ENSCJPG00005011093) #16 MYCN (ENSCJPG00005011100) #17 CYRIA (ENSCJPG00005011106) #18 ENSCJPG00005011113 #19 VSNL1 (ENSCJPG00005011115) #20 SMC6 (ENSCJPG00005011116) #21 GEN1 (ENSCJPG00005011117) #22 MSGN1 (ENSCJPG00005011118) #23 ENSCJPG00005011119 #24 RDH14 (ENSCJPG00005011121) #26 NT5C1B (ENSCJPG00005011122) #27 OSR1 (ENSCJPG00005011136) #28 ENSCJPG00005011142 #29 TTC32 (ENSCJPG00005011143) #30 WDR35 (ENSCJPG00005011144) #31 MATN3 (ENSCJPG00005011280) LAPTM4A (ENSCJPG00005011281) #32 SDC1 (ENSCJPG00005011283) #33 PUM2 (ENSCJPG00005011284) #34 ENSCJPG00005011289 #36 RHOB (ENSCJPG00005011290) #37 HS1BP3 (ENSCJPG00005011293) Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734.ab #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00940000164003 Chicken MODERN SPECIES 22 SLC66A3 (ENSGALG00010002673) #8 ROCK2 (ENSGALG00010002706) #9 E2F6 (ENSGALG00010002730) #10 GREB1 (ENSGALG00010002758) #11 LPIN1 (ENSGALG00010002832) #12 TRIB2 (ENSGALG00010002848) #13 FAM84A (ENSGALG00010002918) #14 NBAS (ENSGALG00010002952) #15 DDX1 (ENSGALG00010003057) #16 ENSGALG00010003639 MYCN (ENSGALG00010003652) #17 FAM49A (ENSGALG00010002341) #18 ENSGALG00010002344 VSNL1 (ENSGALG00010002364) #20 SMC6 (ENSGALG00010002372) #21 GEN1 (ENSGALG00010002376) #22 MSGN1 (ENSGALG00010003849) #23 ZPAX (ENSGALG00010003469) #24 KCNS3 (ENSGALG00010003438) #25 RDH14 (ENSGALG00010003665) #26 NT5C1B (ENSGALG00010003681) #27 OSR1 (ENSGALG00010002500) #28 ENSGALG00010002513 #29 TTC32 (ENSGALG00010002520) #30 WDR35 (ENSGALG00010002551) #31 MATN3 (ENSGALG00010002579) LAPTM4A (ENSGALG00010007992) #32 SDC1 (ENSGALG00010007999) #33 PUM2 (ENSGALG00010008032) #34 ENSGALG00010008042 #36 RHOB (ENSGALG00010008046) #37 Turkey MODERN SPECIES 11 RPS7 (ENSMGAG00000013978) ENSMGAG00000013979 ENSMGAG00000013977 ENSMGAG00000013975 ENSMGAG00000013974 TRIB2 (ENSMGAG00000019802) #13 LRATD1 (ENSMGAG00000022775) #14 NBAS (ENSMGAG00000014024) #15 DDX1 (ENSMGAG00000014025) #16 ENSMGAG00000022947 #17 ENSMGAG00000006102 CYRIA (ENSMGAG00000014026) #18 ENSMGAG00000021857 #19 VSNL1 (ENSMGAG00000014027) #20 SMC6 (ENSMGAG00000014028) #21 ENSMGAG00000014029 #22 MSGN1 (ENSMGAG00000016374) #23 ENSMGAG00000014030 #24 KCNS3 (ENSMGAG00000015620) #25 RDH14 (ENSMGAG00000021183) #26 NT5C1B (ENSMGAG00000014031) #27 OSR1 (ENSMGAG00000014033) #28 ENSMGAG00000014037 #29 TTC32 (ENSMGAG00000019538) #30 WDR35 (ENSMGAG00000014034) #31 MATN3 (ENSMGAG00000014036) LAPTM4A (ENSMGAG00000014038) #32 SDC1 (ENSMGAG00000014039) #33 PUM2 (ENSMGAG00000014040) #34 ENSMGAG00000014041 #36 ENSMGAG00000015625 Neognathae_b ANCESTRAL SPECIES 1 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 Passeriformes ANCESTRAL SPECIES 2 ENSGT00940000160213 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 Great tit MODERN SPECIES 22 PDIA6 (ENSPMJG00000012436) SLC66A3 (ENSPMJG00000012442) #8 ROCK2 (ENSPMJG00000012447) #9 E2F6 (ENSPMJG00000012450) #10 GREB1 (ENSPMJG00000012451) #11 LPIN1 (ENSPMJG00000012453) #12 TRIB2 (ENSPMJG00000012455) #13 LRATD1 (ENSPMJG00000012465) #14 NBAS (ENSPMJG00000012468) #15 DDX1 (ENSPMJG00000012469) #16 MYCN (ENSPMJG00000012473) #17 CYRIA (ENSPMJG00000012475) #18 ENSPMJG00000012476 #19 VSNL1 (ENSPMJG00000012477) #20 SMC6 (ENSPMJG00000012478) #21 GEN1 (ENSPMJG00000012479) #22 MSGN1 (ENSPMJG00000012480) #23 KCNS3 (ENSPMJG00000012481) #25 RDH14 (ENSPMJG00000012483) #26 NT5C1B (ENSPMJG00000012484) #27 OSR1 (ENSPMJG00000012488) #28 ENSPMJG00000012490 #29 TTC32 (ENSPMJG00000012491) #30 WDR35 (ENSPMJG00000012492) #31 MATN3 (ENSPMJG00000012493) LAPTM4A (ENSPMJG00000012494) #32 ENSPMJG00000012495 SDC1 (ENSPMJG00000012496) #33 ENSPMJG00000012497 PUM2 (ENSPMJG00000012498) #34 ENSPMJG00000012500 #36 Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00940000160213 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00940000153916.B #8 ENSGT00990000205825 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 Passeroidea ANCESTRAL SPECIES ENSGT00940000153916.B #8 ENSGT00990000205825 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000163503.B #24 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 Common canary MODERN SPECIES 1 SLC66A3 (ENSSCAG00000012565) #8 ROCK2 (ENSSCAG00000012610) #9 E2F6 (ENSSCAG00000012631) #10 GREB1 (ENSSCAG00000012639) #11 LPIN1 (ENSSCAG00000012667) #12 TRIB2 (ENSSCAG00000012687) #13 LRATD1 (ENSSCAG00000012692) #14 NBAS (ENSSCAG00000012763) #15 DDX1 (ENSSCAG00000013147) #16 MYCN (ENSSCAG00000013162) #17 ENSSCAG00000013165 #17 CYRIA (ENSSCAG00000013175) #18 ENSSCAG00000013192 #19 VSNL1 (ENSSCAG00000013204) #20 SMC6 (ENSSCAG00000013216) #21 GEN1 (ENSSCAG00000013242) #22 MSGN1 (ENSSCAG00000013255) #23 KCNS3 (ENSSCAG00000013262) #25 RDH14 (ENSSCAG00000013279) #26 NT5C1B (ENSSCAG00000013290) #27 OSR1 (ENSSCAG00000013326) #28 ENSSCAG00000013351 #29 TTC32 (ENSSCAG00000013359) #30 WDR35 (ENSSCAG00000013365) #31 MATN3 (ENSSCAG00000013373) LAPTM4A (ENSSCAG00000013378) #32 ENSSCAG00000013381 SDC1 (ENSSCAG00000013387) #33 ENSSCAG00000013394 PUM2 (ENSSCAG00000013402) #34 ENSSCAG00000013425 #36 Zebra finch MODERN SPECIES 23 SLC66A3 (ENSTGUG00000026462) #8 ENSTGUG00000023758 ROCK2 (ENSTGUG00000013067) #9 ENSTGUG00000013076 #10 GREB1 (ENSTGUG00000013081) #11 LPIN1 (ENSTGUG00000013085) #12 TRIB2 (ENSTGUG00000013089) #13 LRATD1 (ENSTGUG00000013091) #14 NBAS (ENSTGUG00000013092) #15 DDX1 (ENSTGUG00000013096) #16 ENSTGUG00000027142 #17 MYCN (ENSTGUG00000013104) #17 CYRIA (ENSTGUG00000013106) #18 ENSTGUG00000019456 #19 SMC6 (ENSTGUG00000013110) #21 GEN1 (ENSTGUG00000013117) #22 VSNL1 (ENSTGUG00000013109) #20 MSGN1 (ENSTGUG00000013122) #23 ENSTGUG00000013124 #24 KCNS3 (ENSTGUG00000013126) #25 RDH14 (ENSTGUG00000013127) #26 NT5C1B (ENSTGUG00000013129) #27 OSR1 (ENSTGUG00000019377) #28 ENSTGUG00000013130 #29 TTC32 (ENSTGUG00000013135) #30 WDR35 (ENSTGUG00000013136) #31 MATN3 (ENSTGUG00000013143) LAPTM4A (ENSTGUG00000013146) #32 ENSTGUG00000024330 SDC1 (ENSTGUG00000013148) #33 PUM2 (ENSTGUG00000013149) #34 Medium ground finch MODERN SPECIES 21 SLC66A3 (ENSGFOG00000007534) #8 ENSGFOG00000007525 ROCK2 (ENSGFOG00000007498) #9 ENSGFOG00000007490 #10 ENSGFOG00000007488 #10 GREB1 (ENSGFOG00000007462) #11 LPIN1 (ENSGFOG00000005160) #12 TRIB2 (ENSGFOG00000010590) #13 LRATD1 (ENSGFOG00000010589) #14 NBAS (ENSGFOG00000010569) #15 DDX1 (ENSGFOG00000010553) #16 MYCN (ENSGFOG00000010546) #17 CYRIA (ENSGFOG00000010538) #18 VSNL1 (ENSGFOG00000010531) #20 SMC6 (ENSGFOG00000010514) #21 GEN1 (ENSGFOG00000010501) #22 KCNS3 (ENSGFOG00000010498) #25 RDH14 (ENSGFOG00000010495) #26 NT5C1B (ENSGFOG00000010490) #27 OSR1 (ENSGFOG00000010486) #28 ENSGFOG00000010484 WDR35 (ENSGFOG00000010480) #31 MATN3 (ENSGFOG00000010458) LAPTM4A (ENSGFOG00000010443) #32 ENSGFOG00000010430 SDC1 (ENSGFOG00000010416) #33 ENSGFOG00000010411 PUM2 (ENSGFOG00000010379) #34 ENSGFOG00000010354 #36 RHOB (ENSGFOG00000010348) #37 HS1BP3 (ENSGFOG00000010343) Flycatcher MODERN SPECIES 21 SLC66A3 (ENSFALG00000024817) #8 ROCK2 (ENSFALG00000006707) #9 ENSFALG00000027375 #10 ENSFALG00000026316 #10 GREB1 (ENSFALG00000006718) #11 LPIN1 (ENSFALG00000006735) #12 TRIB2 (ENSFALG00000028332) #13 LRATD1 (ENSFALG00000015040) #14 NBAS (ENSFALG00000008699) #15 DDX1 (ENSFALG00000008696) #16 ENSFALG00000028783 #17 CYRIA (ENSFALG00000008685) #18 ENSFALG00000001832 #19 VSNL1 (ENSFALG00000027644) #20 SMC6 (ENSFALG00000001824) #21 GEN1 (ENSFALG00000027943) #22 MSGN1 (ENSFALG00000001820) #23 KCNS3 (ENSFALG00000014929) #25 RDH14 (ENSFALG00000014908) #26 NT5C1B (ENSFALG00000001786) #27 OSR1 (ENSFALG00000028520) #28 ENSFALG00000001780 #29 TTC32 (ENSFALG00000001778) #30 WDR35 (ENSFALG00000001777) #31 MATN3 (ENSFALG00000025667) LAPTM4A (ENSFALG00000001775) #32 ENSFALG00000021365 SDC1 (ENSFALG00000001773) #33 ENSFALG00000026224 ENSFALG00000025154 #34 ENSFALG00000001759 #34 Neognathae_c ANCESTRAL SPECIES 10 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00470000042500 #19 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000180923 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00940000164003 ENSGT00950000182945.b.a.a.b.b.b #37 Golden eagle MODERN SPECIES 6 ROCK2 (ENSACCG00020011682) #9 E2F6 (ENSACCG00020011591) #10 GREB1 (ENSACCG00020011499) #11 LPIN1 (ENSACCG00020011416) #12 TRIB2 (ENSACCG00020011397) #13 ENSACCG00020011382 ENSACCG00020011374 LRATD1 (ENSACCG00020011362) #14 NBAS (ENSACCG00020011318) #15 DDX1 (ENSACCG00020011276) #16 MYCN (ENSACCG00020011258) #17 CYRIA (ENSACCG00020011233) #18 ENSACCG00020011205 #19 VSNL1 (ENSACCG00020011201) #20 SMC6 (ENSACCG00020011179) #21 GEN1 (ENSACCG00020011155) #22 MSGN1 (ENSACCG00020011146) #23 KCNS3 (ENSACCG00020011140) #25 RDH14 (ENSACCG00020011134) #26 NT5C1B (ENSACCG00020011126) #27 OSR1 (ENSACCG00020011118) #28 ENSACCG00020011110 #29 WDR35 (ENSACCG00020011082) #31 MATN3 (ENSACCG00020011023) LAPTM4A (ENSACCG00020011001) #32 ENSACCG00020010982 SDC1 (ENSACCG00020010958) #33 ENSACCG00020010949 PUM2 (ENSACCG00020010910) #34 ENSACCG00020010869 #36 ENSACCG00020010855 Kakapo MODERN SPECIES 23 C2orf50 (ENSSHBG00005007249) #7 SLC66A3 (ENSSHBG00005007268) #8 ENSSHBG00005007299 #9 ENSSHBG00005007333 #9 E2F6 (ENSSHBG00005007355) #10 GREB1 (ENSSHBG00005007448) #11 LPIN1 (ENSSHBG00005007857) #12 TRIB2 (ENSSHBG00005007893) #13 LRATD1 (ENSSHBG00005007911) #14 NBAS (ENSSHBG00005008111) #15 DDX1 (ENSSHBG00005009418) #16 MYCN (ENSSHBG00005009434) #17 CYRIA (ENSSHBG00005009457) #18 VSNL1 (ENSSHBG00005009485) #20 SMC6 (ENSSHBG00005009502) #21 ENSSHBG00005009523 #22 MSGN1 (ENSSHBG00005009540) #23 KCNS3 (ENSSHBG00005009545) #25 RDH14 (ENSSHBG00005009558) #26 NT5C1B (ENSSHBG00005009567) #27 OSR1 (ENSSHBG00005009574) #28 TTC32 (ENSSHBG00005009581) #30 WDR35 (ENSSHBG00005009592) #31 LAPTM4A (ENSSHBG00005009614) #32 ENSSHBG00005009640 SDC1 (ENSSHBG00005009652) #33 PUM2 (ENSSHBG00005009670) #34 ENSSHBG00005009714 #36 RHOB (ENSSHBG00005009806) #37 HS1BP3 (ENSSHBG00005009814) GDF7 (ENSSHBG00005009832) African ostrich MODERN SPECIES 803 ENSSCUG00000012515 #19 VSNL1 (ENSSCUG00000012512) #20 SMC6 (ENSSCUG00000012506) #21 GEN1 (ENSSCUG00000012504) #22 KCNS3 (ENSSCUG00000012503) #25 RDH14 (ENSSCUG00000012496) #26 NT5C1B (ENSSCUG00000012495) #27 Australian saltwater crocodile MODERN SPECIES 38 ENSCPRG00005006542 ROCK2 (ENSCPRG00005006216) #9 ENSCPRG00005006100 #10 GREB1 (ENSCPRG00005006077) #11 LPIN1 (ENSCPRG00005005996) #12 TRIB2 (ENSCPRG00005005953) #13 ENSCPRG00005005922 NBAS (ENSCPRG00005005782) #15 DDX1 (ENSCPRG00005005666) #16 MYCN (ENSCPRG00005005639) #17 CYRIA (ENSCPRG00005005582) #18 ENSCPRG00005005559 #19 VSNL1 (ENSCPRG00005005557) #20 ENSCPRG00005005504 #21 ENSCPRG00005005424 #21 GEN1 (ENSCPRG00005005337) #22 MSGN1 (ENSCPRG00005005322) #23 KCNS3 (ENSCPRG00005005307) #25 RDH14 (ENSCPRG00005005281) #26 NT5C1B (ENSCPRG00005005265) #27 ENSCPRG00005005234 OSR1 (ENSCPRG00005005214) #28 TTC32 (ENSCPRG00005005187) #30 WDR35 (ENSCPRG00005005160) #31 MATN3 (ENSCPRG00005005148) LAPTM4A (ENSCPRG00005005092) #32 SDC1 (ENSCPRG00005005072) #33 PUM2 (ENSCPRG00005005047) #34 ENSCPRG00005004993 #36 ENSCPRG00005004985 RHOB (ENSCPRG00005004980) #37 Lepidosauria ANCESTRAL SPECIES ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00960000192062 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000155745 #31 ENSGT00940000157581 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00950000182945.b.a.a.b.b.b #37 Episquamata ANCESTRAL SPECIES ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00960000192062 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000155745 #31 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00950000182945.b.a.a.b.b.b #37 ENSGT00390000013092 Toxicofera ANCESTRAL SPECIES ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00960000192062 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000155745 #31 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00900000143081 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00950000182945.b.a.a.b.b.b #37 ENSGT00390000013092 Lizard MODERN SPECIES ENSACAG00000038536 LRATD1 (ENSACAG00000000402) #14 ENSACAG00000036783 ENSACAG00000038844 ENSACAG00000042544 ENSACAG00000036037 ENSACAG00000040466 NBAS (ENSACAG00000010861) #15 DDX1 (ENSACAG00000011036) #16 MYCN (ENSACAG00000011351) #17 CYRIA (ENSACAG00000000956) #18 ENSACAG00000042126 VSNL1 (ENSACAG00000001746) #20 ENSACAG00000040359 SMC6 (ENSACAG00000001613) #21 GEN1 (ENSACAG00000001607) #22 MSGN1 (ENSACAG00000001604) #23 KCNS3 (ENSACAG00000001600) #25 ENSACAG00000034780 ENSACAG00000010816 ENSACAG00000043172 ENSACAG00000038525 ENSACAG00000004579 ENSACAG00000038429 ENSACAG00000035373 ENSACAG00000034865 KLHL29 (ENSACAG00000011365) ATAD2B (ENSACAG00000011448) UBXN2A (ENSACAG00000011587) MFSD2B (ENSACAG00000029258) WDCP (ENSACAG00000011645) Elapidae ANCESTRAL SPECIES ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT01010000229139 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00940000156513 #20 ENSGT00550000074816.A.a.c #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000155745 #31 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00950000182945.b.a.a.b.b.b #37 ENSGT00390000013092 ENSGT00950000185286 Elapidae_a DUPLICATION Elapidae_a ANCESTRAL SPECIES 6 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT01010000229139 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00940000156513 #20 ENSGT00550000074816.A.a.c #21 ENSGT00940000159266.e #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000155745 #31 ENSGT00940000160181.a #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00950000182945.b.a.a.b.b.b #37 ENSGT00390000013092 ENSGT00940000160140.b ENSGT00950000185286 Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT01010000229139 ENSGT00390000008041.C #11 ENSGT00940000157219.c #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00940000156513 #20 ENSGT00550000074816.A.a.c #21 ENSGT00940000159266.e #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000155745 #31 ENSGT00940000160181.a #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00950000182945.b.a.a.b.b.b #37 ENSGT00390000013092 ENSGT00950000185286 Mainland tiger snake MODERN SPECIES 74 VSNL1 (ENSNSUG00000005729) #20 SMC6 (ENSNSUG00000003811) #21 GEN1 (ENSNSUG00000003777) #22 MSGN1 (ENSNSUG00000003773) #23 KCNS3 (ENSNSUG00000003771) #25 WDR35 (ENSNSUG00000003762) #31 RDH14 (ENSNSUG00000003758) #26 NT5C1B (ENSNSUG00000003749) #27 OSR1 (ENSNSUG00000003748) #28 ENSNSUG00000003742 #29 TTC32 (ENSNSUG00000003736) #30 LAPTM4A (ENSNSUG00000003734) #32 SDC1 (ENSNSUG00000003733) #33 PUM2 (ENSNSUG00000000851) #34 ENSNSUG00000000764 #36 RHOB (ENSNSUG00000000761) #37 HS1BP3 (ENSNSUG00000000758) ENSNSUG00000000756 Eastern brown snake MODERN SPECIES 4 SLC66A3 (ENSPTXG00000012846) #8 ROCK2 (ENSPTXG00000012863) #9 E2F6 (ENSPTXG00000014503) #10 ENSPTXG00000014504 GREB1 (ENSPTXG00000014506) #11 LPIN1 (ENSPTXG00000014511) #12 TRIB2 (ENSPTXG00000014512) #13 LRATD1 (ENSPTXG00000014513) #14 NBAS (ENSPTXG00000014516) #15 DDX1 (ENSPTXG00000014521) #16 MYCN (ENSPTXG00000014526) #17 CYRIA (ENSPTXG00000014529) #18 VSNL1 (ENSPTXG00000014531) #20 SMC6 (ENSPTXG00000014533) #21 ENSPTXG00000014536 ENSPTXG00000014537 #22 MSGN1 (ENSPTXG00000014539) #23 KCNS3 (ENSPTXG00000014540) #25 WDR35 (ENSPTXG00000014548) #31 RDH14 (ENSPTXG00000014558) #26 NT5C1B (ENSPTXG00000014559) #27 OSR1 (ENSPTXG00000014560) #28 ENSPTXG00000014561 #29 TTC32 (ENSPTXG00000014562) #30 LAPTM4A (ENSPTXG00000014563) #32 SDC1 (ENSPTXG00000014564) #33 PUM2 (ENSPTXG00000014565) #34 ENSPTXG00000014566 #36 RHOB (ENSPTXG00000014567) #37 HS1BP3 (ENSPTXG00000014568) GDF7 (ENSPTXG00000014569) Blue-lipped sea krait MODERN SPECIES 5826 GEN1 (ENSLLTG00000006176) #22 MSGN1 (ENSLLTG00000006170) #23 KCNS3 (ENSLLTG00000006167) #25 Elapidae_a ANCESTRAL SPECIES ENSGT00940000159266.f #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000159266.f #22 Eastern brown snake MODERN SPECIES 1713 ENSPTXG00000012644 ENSPTXG00000012646 #22 Indian cobra MODERN SPECIES ROCK2 (ENSNNAG00000012714) #9 E2F6 (ENSNNAG00000004227) #10 ENSNNAG00000004249 GREB1 (ENSNNAG00000004275) #11 LPIN1 (ENSNNAG00000004384) #12 TRIB2 (ENSNNAG00000004479) #13 LRATD1 (ENSNNAG00000004490) #14 NBAS (ENSNNAG00000004531) #15 DDX1 (ENSNNAG00000004957) #16 MYCN (ENSNNAG00000005197) #17 CYRIA (ENSNNAG00000005209) #18 ENSNNAG00000005240 ENSNNAG00000005266 VSNL1 (ENSNNAG00000005283) #20 SMC6 (ENSNNAG00000005310) #21 ENSNNAG00000005468 #22 MSGN1 (ENSNNAG00000005477) #23 KCNS3 (ENSNNAG00000005487) #25 WDR35 (ENSNNAG00000005515) #31 RDH14 (ENSNNAG00000005638) #26 NT5C1B (ENSNNAG00000005647) #27 OSR1 (ENSNNAG00000005665) #28 ENSNNAG00000005690 #29 TTC32 (ENSNNAG00000005721) #30 LAPTM4A (ENSNNAG00000005741) #32 ENSNNAG00000005759 #33 ENSNNAG00000005775 PUM2 (ENSNNAG00000005799) #34 ENSNNAG00000005965 #36 RHOB (ENSNNAG00000006172) #37 HS1BP3 (ENSNNAG00000006192) Laterata ANCESTRAL SPECIES 13 ENSGT00940000160213 ENSGT00940000154459.B #7 ENSGT00940000153916.B #8 ENSGT01030000234517.D #9 ENSGT00940000155734 #10 ENSGT00390000008041.C #11 ENSGT00940000157219 #12 ENSGT00950000182986.a.b.a #13 ENSGT00940000161165 #14 ENSGT00390000012474 #15 ENSGT00940000155678 #16 ENSGT00940000158432 #17 ENSGT00390000015159.a.b #18 ENSGT00940000156513 #20 ENSGT00550000074816.A.a #21 ENSGT00940000159266 #22 ENSGT00530000063712.a.b #23 ENSGT00940000155979 #25 ENSGT00940000155745 #31 ENSGT00940000160181 #26 ENSGT00390000017767.b.a #27 ENSGT00940000158993 #28 ENSGT00940000165918 #29 ENSGT00390000011905 #30 ENSGT00940000153446.b #32 ENSGT00940000161171 #33 ENSGT00940000157575 #34 ENSGT00940000162520.d #36 ENSGT00950000182945.b.a.a.b.b.b #37 ENSGT00390000013092 ENSGT00940000160140.b Argentine black and white tegu MODERN SPECIES 43 PAIP2 (ENSSMRG00000022733) SLC23A1 (ENSSMRG00000022734) E2F6 (ENSSMRG00000022735) #10 GREB1 (ENSSMRG00000022736) #11 LPIN1 (ENSSMRG00000022737) #12 TRIB2 (ENSSMRG00000022739) #13 LRATD1 (ENSSMRG00000022742) #14 NBAS (ENSSMRG00000022743) #15 DDX1 (ENSSMRG00000022744) #16 MYCN (ENSSMRG00000022746) #17 ENSSMRG00000022749 CYRIA (ENSSMRG00000022751) #18 ENSSMRG00000022753 VSNL1 (ENSSMRG00000022754) #20 SMC6 (ENSSMRG00000022755) #21 GEN1 (ENSSMRG00000022756) #22 MSGN1 (ENSSMRG00000022757) #23 KCNS3 (ENSSMRG00000022758) #25 WDR35 (ENSSMRG00000022759) #31 RDH14 (ENSSMRG00000022761) #26 NT5C1B (ENSSMRG00000022762) #27 Common wall lizard MODERN SPECIES 11 ESF1 (ENSPMRG00000002058) NDUFAF5 (ENSPMRG00000002068) SEL1L2 (ENSPMRG00000002085) ENSPMRG00000002121 FLRT3 (ENSPMRG00000002123) KIF16B (ENSPMRG00000002144) SNRPB2 (ENSPMRG00000002233) OTOR (ENSPMRG00000002241) PCSK2 (ENSPMRG00000002244) BFSP1 (ENSPMRG00000002249) ENSPMRG00000002256 ENSPMRG00000002259 ENSPMRG00000002261 VSNL1 (ENSPMRG00000002266) #20 SMC6 (ENSPMRG00000002270) #21 GEN1 (ENSPMRG00000002288) #22 KCNS3 (ENSPMRG00000002300) #25 WDR35 (ENSPMRG00000002308) #31 RDH14 (ENSPMRG00000002345) #26 NT5C1B (ENSPMRG00000002348) #27 OSR1 (ENSPMRG00000002362) #28 ENSPMRG00000002372 #29 TTC32 (ENSPMRG00000002380) #30 LAPTM4A (ENSPMRG00000002388) #32 MATN3 (ENSPMRG00000002396) SDC1 (ENSPMRG00000002406) #33 PUM2 (ENSPMRG00000010266) #34 ENSPMRG00000010287 #36 RHOB (ENSPMRG00000010292) #37 HS1BP3 (ENSPMRG00000010298) GDF7 (ENSPMRG00000010304) tuatara MODERN SPECIES 709 VSNL1 (ENSSPUG00000002309) #20 SMC6 (ENSSPUG00000002341) #21 ENSSPUG00000002388 #22 KCNS3 (ENSSPUG00000002407) #25