Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00940000155397.b #21	ENSGT00900000143153	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00940000164013	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36
Glires	ANCESTRAL SPECIES	9	ENSGT00390000009531 #7	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00940000164013	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36
Rodentia	ANCESTRAL SPECIES	9	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Muroidea	ANCESTRAL SPECIES	1	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Murinae	ANCESTRAL SPECIES		ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Mus	ANCESTRAL SPECIES		ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00520000061590	ENSGT00940000155460 #26	ENSGT00900000143396 #27	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36
Mus_A	ANCESTRAL SPECIES	16	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00520000061590	ENSGT00940000155460 #26	ENSGT00900000143396 #27	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36
Ryukyu mouse	MODERN SPECIES	10	Mlana (MGP_CAROLIEiJ_G0022862) #7	Ermp1 (MGP_CAROLIEiJ_G0022861) #8	Ric1 (MGP_CAROLIEiJ_G0022860) #9	Pdcd1lg2 (MGP_CAROLIEiJ_G0022859) #10	Cd274 (MGP_CAROLIEiJ_G0022858) #11	Plgrkt (MGP_CAROLIEiJ_G0022857) #12	Rln1 (MGP_CAROLIEiJ_G0022856) #13	Insl6 (MGP_CAROLIEiJ_G0022855) #14	Jak2 (MGP_CAROLIEiJ_G0022854) #15	Rcl1 (MGP_CAROLIEiJ_G0022853) #16	Ak3 (MGP_CAROLIEiJ_G0022852) #17	Cdc37l1 (MGP_CAROLIEiJ_G0022851) #18	Plpp6 (MGP_CAROLIEiJ_G0022850) #19	Spata6l (MGP_CAROLIEiJ_G0022849) #20	Slc1a1 (MGP_CAROLIEiJ_G0022848) #21	Glis3 (MGP_CAROLIEiJ_G0022847) #22	Rfx3 (MGP_CAROLIEiJ_G0022846) #23	Pum3 (MGP_CAROLIEiJ_G0022845) #24	Kcnv2 (MGP_CAROLIEiJ_G0022844) #25	Vldlr (MGP_CAROLIEiJ_G0022843) #26	MGP_CAROLIEiJ_G0022842 #27	Smarca2 (MGP_CAROLIEiJ_G0022841) #28	Dmrt2 (MGP_CAROLIEiJ_G0022840) #29	Dmrt3 (MGP_CAROLIEiJ_G0022839) #30	Dmrt1 (MGP_CAROLIEiJ_G0022838) #31	Kank1 (MGP_CAROLIEiJ_G0022837) #32	Dock8 (MGP_CAROLIEiJ_G0022836) #33	Cbwd1 (MGP_CAROLIEiJ_G0022835) #34	Foxd4 (MGP_CAROLIEiJ_G0022834) #35	Pgm5 (MGP_CAROLIEiJ_G0022833) #36	Tmem252 (MGP_CAROLIEiJ_G0022832) #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00520000061590	ENSGT00940000155460 #26	ENSGT00900000143396 #27	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36
Mouse	MODERN SPECIES	10	Mlana (ENSMUSG00000024806) #7	Ermp1 (ENSMUSG00000046324) #8	Ric1 (ENSMUSG00000038658) #9	Pdcd1lg2 (ENSMUSG00000016498) #10	Cd274 (ENSMUSG00000016496) #11	Plgrkt (ENSMUSG00000016495) #12	Rln1 (ENSMUSG00000039097) #13	Insl6 (ENSMUSG00000050957) #14	Jak2 (ENSMUSG00000024789) #15	Rcl1 (ENSMUSG00000024785) #16	Ak3 (ENSMUSG00000024782) #17	Cdc37l1 (ENSMUSG00000024780) #18	Plpp6 (ENSMUSG00000040105) #19	Spata6l (ENSMUSG00000064202) #20	Slc1a1 (ENSMUSG00000024935) #21	Glis3 (ENSMUSG00000052942) #22	Rfx3 (ENSMUSG00000040929) #23	Pum3 (ENSMUSG00000041360) #24	Kcnv2 (ENSMUSG00000047298) #25	Vldlr (ENSMUSG00000024924) #26	Gm815 (ENSMUSG00000074913) #27	Smarca2 (ENSMUSG00000024921) #28	Dmrt2 (ENSMUSG00000048138) #29	Dmrt3 (ENSMUSG00000042372) #30	Dmrt1 (ENSMUSG00000024837) #31	Kank1 (ENSMUSG00000032702) #32	Dock8 (ENSMUSG00000052085) #33	Cbwd1 (ENSMUSG00000024878) #34	Foxd4 (ENSMUSG00000051490) #35	Gm10053 (ENSMUSG00000058927)	Pgm5 (ENSMUSG00000041731) #36
Mus_C	ANCESTRAL SPECIES	24	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00520000061590	ENSGT00940000155460 #26	ENSGT00900000143396 #27	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36
spretus	MODERN SPECIES	10	Mlana (MGP_SPRETEiJ_G0023780) #7	Ermp1 (MGP_SPRETEiJ_G0023779) #8	Ric1 (MGP_SPRETEiJ_G0023778) #9	Pdcd1lg2 (MGP_SPRETEiJ_G0023777) #10	Cd274 (MGP_SPRETEiJ_G0023776) #11	Plgrkt (MGP_SPRETEiJ_G0023775) #12	Rln1 (MGP_SPRETEiJ_G0023774) #13	Insl6 (MGP_SPRETEiJ_G0023773) #14	Jak2 (MGP_SPRETEiJ_G0023772) #15	Rcl1 (MGP_SPRETEiJ_G0023771) #16	Ak3 (MGP_SPRETEiJ_G0023770) #17	Cdc37l1 (MGP_SPRETEiJ_G0023769) #18	Plpp6 (MGP_SPRETEiJ_G0023768) #19	Spata6l (MGP_SPRETEiJ_G0023767) #20	Slc1a1 (MGP_SPRETEiJ_G0023766) #21	Glis3 (MGP_SPRETEiJ_G0023765) #22	Rfx3 (MGP_SPRETEiJ_G0023764) #23	Pum3 (MGP_SPRETEiJ_G0023763) #24	Kcnv2 (MGP_SPRETEiJ_G0023762) #25	Vldlr (MGP_SPRETEiJ_G0023761) #26	MGP_SPRETEiJ_G0023760 #27	Smarca2 (MGP_SPRETEiJ_G0023759) #28	Dmrt2 (MGP_SPRETEiJ_G0023758) #29	Dmrt3 (MGP_SPRETEiJ_G0023757) #30	Kank1 (MGP_SPRETEiJ_G0023756) #32	Dock8 (MGP_SPRETEiJ_G0023755) #33	Cbwd1 (MGP_SPRETEiJ_G0023754) #34	Foxd4 (MGP_SPRETEiJ_G0023753) #35	Pgm5 (MGP_SPRETEiJ_G0023752) #36	Tmem252 (MGP_SPRETEiJ_G0023751) #37	Fam122a (MGP_SPRETEiJ_G0023750)
Steppe mouse	MODERN SPECIES	3106																Glis3 (ENSMSIG00000023382) #22	ENSMSIG00000023373	Rfx3 (ENSMSIG00000023245) #23	Pum3 (ENSMSIG00000023194) #24	Kcnv2 (ENSMSIG00000023184) #25	ENSMSIG00000023160	Vldlr (ENSMSIG00000023084) #26	Gm815 (ENSMSIG00000023064) #27	Smarca2 (ENSMSIG00000022131) #28
Shrew mouse	MODERN SPECIES		Mlana (MGP_PahariEiJ_G0014355) #7	Ermp1 (MGP_PahariEiJ_G0014354) #8	Ric1 (MGP_PahariEiJ_G0014353) #9	Pdcd1lg2 (MGP_PahariEiJ_G0014352) #10	Cd274 (MGP_PahariEiJ_G0014351) #11	MGP_PahariEiJ_G0014350	Rln1 (MGP_PahariEiJ_G0014349) #13	Insl6 (MGP_PahariEiJ_G0014348) #14	Jak2 (MGP_PahariEiJ_G0014347) #15	Rcl1 (MGP_PahariEiJ_G0014346) #16	Ak3 (MGP_PahariEiJ_G0014345) #17	Cdc37l1 (MGP_PahariEiJ_G0014344) #18	Plpp6 (MGP_PahariEiJ_G0014343) #19	Spata6l (MGP_PahariEiJ_G0014342) #20	Slc1a1 (MGP_PahariEiJ_G0014341) #21	Glis3 (MGP_PahariEiJ_G0014340) #22	Rfx3 (MGP_PahariEiJ_G0014339) #23	Pum3 (MGP_PahariEiJ_G0014338) #24	Kcnv2 (MGP_PahariEiJ_G0014337) #25	Vldlr (MGP_PahariEiJ_G0014336) #26	MGP_PahariEiJ_G0014335 #27	Smarca2 (MGP_PahariEiJ_G0014334) #28	Dmrt2 (MGP_PahariEiJ_G0014333) #29	Dmrt3 (MGP_PahariEiJ_G0014332) #30	Dmrt1 (MGP_PahariEiJ_G0014331) #31	Kank1 (MGP_PahariEiJ_G0014330) #32	Dock8 (MGP_PahariEiJ_G0014329) #33	Cbwd1 (MGP_PahariEiJ_G0014328) #34	Foxd4 (MGP_PahariEiJ_G0014327) #35	Pgm5 (MGP_PahariEiJ_G0014326) #36	Tmem252 (MGP_PahariEiJ_G0014325) #37
Rat	MODERN SPECIES		Ric1 (ENSRNOG00000016172) #9	Pdcd1lg2 (ENSRNOG00000016136) #10	Cd274 (ENSRNOG00000016112) #11	Plgrkt (ENSRNOG00000015932) #12	Rln1 (ENSRNOG00000060867) #13	Insl6 (ENSRNOG00000015868) #14	Jak2 (ENSRNOG00000059968) #15	Rcl1 (ENSRNOG00000015491) #16	Ak3 (ENSRNOG00000052506) #17	Cdc37l1 (ENSRNOG00000010967) #18	RGD1565057 (ENSRNOG00000069618)	Plpp6 (ENSRNOG00000015268) #19	Spata6l (ENSRNOG00000015137) #20	ENSRNOG00000065811	Slc1a1 (ENSRNOG00000014816) #21	Glis3 (ENSRNOG00000014768) #22	ENSRNOG00000066761	Rfx3 (ENSRNOG00000014486) #23	Pum3 (ENSRNOG00000012574) #24	Kcnv2 (ENSRNOG00000012566) #25	ENSRNOG00000062591	Vldlr (ENSRNOG00000027491) #26	ENSRNOG00000069446	Smarca2 (ENSRNOG00000011931) #28	ENSRNOG00000062555	Dmrt2 (ENSRNOG00000016301) #29	Dmrt3 (ENSRNOG00000016284) #30	Dmrt1 (ENSRNOG00000016075) #31	Kank1 (ENSRNOG00000016023) #32	Hmgb1-ps4 (ENSRNOG00000065098)	Dock8 (ENSRNOG00000015894) #33
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Chinese hamster chok1gshd	MODERN SPECIES	401	Ermp1 (ENSCGRG00001021468) #8	Ric1 (ENSCGRG00001016728) #9	Pdcd1lg2 (ENSCGRG00001015183) #10	ENSCGRG00001013276	Cd274 (ENSCGRG00001024294) #11	Plgrkt (ENSCGRG00001023695) #12	Insl6 (ENSCGRG00001020673) #14	Jak2 (ENSCGRG00001015840) #15	Rcl1 (ENSCGRG00001013748) #16	AK3 (ENSCGRG00001007296) #17	Cdc37l1 (ENSCGRG00001000264) #18	Plpp6 (ENSCGRG00001012981) #19	Spata6l (ENSCGRG00001002881) #20	ENSCGRG00001023585	Slc1a1 (ENSCGRG00001022336) #21	Glis3 (ENSCGRG00001014233) #22	Rfx3 (ENSCGRG00001021745) #23	Pum3 (ENSCGRG00001016402) #24	Kcnv2 (ENSCGRG00001018140) #25	ENSCGRG00001017895	Vldlr (ENSCGRG00001014399) #26	Smarca2 (ENSCGRG00001002323) #28	Dmrt2 (ENSCGRG00001007562) #29	Dmrt3 (ENSCGRG00001005036) #30	Dmrt1 (ENSCGRG00001000625) #31	Kank1 (ENSCGRG00001020355) #32	Dock8 (ENSCGRG00001013079) #33	Cbwd1 (ENSCGRG00001020851) #34	Foxd4 (ENSCGRG00001006276) #35	Pgm5 (ENSCGRG00001020037) #36	Tmem252 (ENSCGRG00001019081) #37
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000158126 #36	ENSGT00390000005250 #37	ENSGT00390000015476.d.b
Prairie vole	MODERN SPECIES	16	ENSMOCG00000019292 #8	Ric1 (ENSMOCG00000018339) #9	Pdcd1lg2 (ENSMOCG00000002927) #10	Cd274 (ENSMOCG00000016738) #11	Plgrkt (ENSMOCG00000013870) #12	Rln1 (ENSMOCG00000012108) #13	Insl6 (ENSMOCG00000015208) #14	Jak2 (ENSMOCG00000013580) #15	Rcl1 (ENSMOCG00000012145) #16	Ak3 (ENSMOCG00000010856) #17	Cdc37l1 (ENSMOCG00000018341) #18	Plpp6 (ENSMOCG00000001135) #19	Spata6l (ENSMOCG00000022082) #20	ENSMOCG00000018225	Slc1a1 (ENSMOCG00000017507) #21	Glis3 (ENSMOCG00000009953) #22	Rfx3 (ENSMOCG00000018931) #23	ENSMOCG00000019519 #24	Kcnv2 (ENSMOCG00000014872) #25	Vldlr (ENSMOCG00000004269) #26	Smarca2 (ENSMOCG00000001611) #28	Dmrt2 (ENSMOCG00000016701) #29	Dmrt3 (ENSMOCG00000015270) #30	ENSMOCG00000017971 #31	Kank1 (ENSMOCG00000020725) #32	Dock8 (ENSMOCG00000014249) #33	Cbwd1 (ENSMOCG00000015974) #34	Pgm5 (ENSMOCG00000011710) #36	Tmem252 (ENSMOCG00000017938) #37	Fam122a (ENSMOCG00000001051)	ENSMOCG00000010285
Northern American deer mouse	MODERN SPECIES		Ric1 (ENSPEMG00000022073) #9	Pdcd1lg2 (ENSPEMG00000021972) #10	Cd274 (ENSPEMG00000022427) #11	Plgrkt (ENSPEMG00000022507) #12	Rln1 (ENSPEMG00000022594) #13	ENSPEMG00000023396 #14	Jak2 (ENSPEMG00000022083) #15	Rcl1 (ENSPEMG00000023275) #16	Ak3 (ENSPEMG00000022781) #17	Cdc37l1 (ENSPEMG00000000344) #18	Plpp6 (ENSPEMG00000007181) #19	Spata6l (ENSPEMG00000023122) #20	ENSPEMG00000021571	Slc1a1 (ENSPEMG00000009611) #21	ENSPEMG00000004286	Glis3 (ENSPEMG00000020002) #22	Rfx3 (ENSPEMG00000019731) #23	ENSPEMG00000019340 #24	ENSPEMG00000030423	Kcnv2 (ENSPEMG00000020138) #25	Vldlr (ENSPEMG00000022250) #26	ENSPEMG00000021666	Smarca2 (ENSPEMG00000019821) #28	Dmrt2 (ENSPEMG00000019767) #29	Dmrt3 (ENSPEMG00000019990) #30	Dmrt1 (ENSPEMG00000019943) #31	Kank1 (ENSPEMG00000013916) #32	Dock8 (ENSPEMG00000014001) #33	Cbwd1 (ENSPEMG00000000396) #34	Pgm5 (ENSPEMG00000020205) #36	Tmem252 (ENSPEMG00000007137) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1166								Jak2 (ENSNGAG00000000096) #15	Rcl1 (ENSNGAG00000015327) #16	Ak3 (ENSNGAG00000016647) #17	Cdc37l1 (ENSNGAG00000018155) #18	Spata6l (ENSNGAG00000017948) #20	Plpp6 (ENSNGAG00000014756) #19	Slc1a1 (ENSNGAG00000014723) #21	ENSNGAG00000018137	Glis3 (ENSNGAG00000006111) #22	Rfx3 (ENSNGAG00000016470) #23	Pum3 (ENSNGAG00000019468) #24	Kcnv2 (ENSNGAG00000020439) #25	Vldlr (ENSNGAG00000003966) #26	ENSNGAG00000012912	Smarca2 (ENSNGAG00000000108) #28	ENSNGAG00000013866	Dmrt2 (ENSNGAG00000020041) #29	Dmrt3 (ENSNGAG00000020423) #30	Dmrt1 (ENSNGAG00000001295) #31
Lesser Egyptian jerboa	MODERN SPECIES	50	Ranbp6 (ENSJJAG00000010492)	9930021J03Rik (ENSJJAG00000016877)	Mlana (ENSJJAG00000022272) #7	Ermp1 (ENSJJAG00000021848) #8	Ric1 (ENSJJAG00000014841) #9	Plgrkt (ENSJJAG00000010846) #12	Rln1 (ENSJJAG00000013838) #13	Jak2 (ENSJJAG00000012271) #15	ENSJJAG00000022803 #16	Ak3 (ENSJJAG00000023388) #17	Cdc37l1 (ENSJJAG00000024330) #18	Plpp6 (ENSJJAG00000011277) #19	Spata6l (ENSJJAG00000022941) #20	ENSJJAG00000020462	Slc1a1 (ENSJJAG00000018507) #21	Glis3 (ENSJJAG00000011399) #22	ENSJJAG00000024335	Rfx3 (ENSJJAG00000010280) #23	ENSJJAG00000010263	Pum3 (ENSJJAG00000012563) #24	Kcnv2 (ENSJJAG00000016782) #25	ENSJJAG00000000409	Vldlr (ENSJJAG00000016440) #26	Smarca2 (ENSJJAG00000010867) #28	ENSJJAG00000010719	Dmrt2 (ENSJJAG00000023959) #29	Dmrt3 (ENSJJAG00000022573) #30	Dmrt1 (ENSJJAG00000016690) #31	Kank1 (ENSJJAG00000018774) #32	ENSJJAG00000015498 #33	ENSJJAG00000017231 #33
Kangaroo rat	MODERN SPECIES	359								ENSDORG00000028062	ENSDORG00000000109 #12	Jak2 (ENSDORG00000011552) #15	Rcl1 (ENSDORG00000015645) #16	Ak3 (ENSDORG00000010355) #17	Cdc37l1 (ENSDORG00000023648) #18	Plpp6 (ENSDORG00000003071) #19	Slc1a1 (ENSDORG00000010091) #21	ENSDORG00000025494 #22	Rfx3 (ENSDORG00000013906) #23	ENSDORG00000003628 #24	Kcnv2 (ENSDORG00000011511) #25	Vldlr (ENSDORG00000012954) #26	Smarca2 (ENSDORG00000014832) #28	Dmrt2 (ENSDORG00000007216) #29	ENSDORG00000006363 #31	Kank1 (ENSDORG00000015159) #32	Dock8 (ENSDORG00000007203) #33	Cbwd1 (ENSDORG00000004917) #34	Pgm5 (ENSDORG00000005476) #36	Tmem252 (ENSDORG00000005477) #37	Fam122a (ENSDORG00000001152)	Pip5k1b (ENSDORG00000001153)	Fxn (ENSDORG00000027975)
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00940000155397.b #21	ENSGT00900000143153	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Marmotini	ANCESTRAL SPECIES	1	ENSGT00530000063839.k #8	ENSGT00390000002955 #9	ENSGT00940000161373 #10	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00940000155397.b #21	ENSGT00900000143153	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Marmotini_b	ANCESTRAL SPECIES	88							ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00940000155397.b #21	ENSGT00900000143153	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Squirrel	MODERN SPECIES	103							ENSSTOG00000016298 #14	JAK2 (ENSSTOG00000006679) #15	RCL1 (ENSSTOG00000000023) #16	AK3 (ENSSTOG00000000021) #17	CDC37L1 (ENSSTOG00000000020) #18	SPATA6L (ENSSTOG00000000018) #20	PLPP6 (ENSSTOG00000025831) #19	SLC1A1 (ENSSTOG00000023583) #21	ENSSTOG00000031708	GLIS3 (ENSSTOG00000000302) #22	RFX3 (ENSSTOG00000006974) #23	PUM3 (ENSSTOG00000009586) #24	KCNV2 (ENSSTOG00000020003) #25	VLDLR (ENSSTOG00000006880) #26	ENSSTOG00000031987	SMARCA2 (ENSSTOG00000006812) #28	DMRT2 (ENSSTOG00000026909) #29	DMRT3 (ENSSTOG00000023574) #30	DMRT1 (ENSSTOG00000010235) #31	KANK1 (ENSSTOG00000010218) #32	ENSSTOG00000030036	DOCK8 (ENSSTOG00000016411) #33	ENSSTOG00000031824	ENSSTOG00000028764 #34	ENSSTOG00000029964 #35
Alpin marmot	MODERN SPECIES	32	CD274 (ENSMMMG00000002100) #11	PLGRKT (ENSMMMG00000002117) #12	ENSMMMG00000002130 #13	ENSMMMG00000002146	ENSMMMG00000002157	ENSMMMG00000002165 #14	JAK2 (ENSMMMG00000002174) #15	RCL1 (ENSMMMG00000002259) #16	AK3 (ENSMMMG00000002286) #17	CDC37L1 (ENSMMMG00000002322) #18	PLPP6 (ENSMMMG00000002356) #19	SPATA6L (ENSMMMG00000002361) #20	SLC1A1 (ENSMMMG00000002380) #21	ENSMMMG00000002405	ENSMMMG00000002416	GLIS3 (ENSMMMG00000002430) #22	ENSMMMG00000002504	PUM3 (ENSMMMG00000002513) #24	KCNV2 (ENSMMMG00000002550) #25	ENSMMMG00000002572	VLDLR (ENSMMMG00000002594) #26	ENSMMMG00000002765	ENSMMMG00000002785	SMARCA2 (ENSMMMG00000002811) #28	ENSMMMG00000003212	DMRT2 (ENSMMMG00000003238) #29	DMRT3 (ENSMMMG00000003239) #30	DMRT1 (ENSMMMG00000003270) #31	KANK1 (ENSMMMG00000003281) #32	ENSMMMG00000003301	ENSMMMG00000003304
Eurasian red squirrel	MODERN SPECIES	6	MLANA (ENSSVLG00005025137) #7	ERMP1 (ENSSVLG00005025117) #8	RIC1 (ENSSVLG00005025040) #9	PDCD1LG2 (ENSSVLG00005024955) #10	CD274 (ENSSVLG00005024930) #11	PLGRKT (ENSSVLG00005024908) #12	ENSSVLG00005024871	INSL6 (ENSSVLG00005024849) #14	JAK2 (ENSSVLG00005024808) #15	RCL1 (ENSSVLG00005024752) #16	ENSSVLG00005024721 #17	CDC37L1 (ENSSVLG00005024699) #18	PLPP6 (ENSSVLG00005024689) #19	SPATA6L (ENSSVLG00005024615) #20	SLC1A1 (ENSSVLG00005024569) #21	GLIS3 (ENSSVLG00005024543) #22	RFX3 (ENSSVLG00005024420) #23	ENSSVLG00005024401	PUM3 (ENSSVLG00005024338) #24	KCNV2 (ENSSVLG00005024318) #25	VLDLR (ENSSVLG00005024232) #26	ENSSVLG00005024201	SMARCA2 (ENSSVLG00005024009) #28	DMRT2 (ENSSVLG00005023918) #29	DMRT3 (ENSSVLG00005023888) #30	DMRT1 (ENSSVLG00005023845) #31	KANK1 (ENSSVLG00005023807) #32	DOCK8 (ENSSVLG00005023344) #33	ENSSVLG00005023280	ENSSVLG00005023230 #34	ENSSVLG00005023212 #35
Hystricomorpha	ANCESTRAL SPECIES	46	ENSGT00390000009531 #7	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a.c.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Hystricomorpha_a	ANCESTRAL SPECIES	53	ENSGT00390000009531 #7	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.a.a #13	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a.c.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00940000155397.b #21	ENSGT00900000143153	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b.d #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Hystricomorpha_b	ANCESTRAL SPECIES	71	ENSGT00390000011483	ENSGT00390000009531 #7	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a.c.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00900000143153	ENSGT00940000155397.b #21	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23	ENSGT00390000015757 #24	ENSGT00940000157438 #25	ENSGT00940000155460 #26	ENSGT00520000061590	ENSGT00940000154821.b.d #28	ENSGT00940000156282.a.a #29	ENSGT00940000160420 #30	ENSGT00940000156489.n #31	ENSGT00940000154886.a.a #32	ENSGT00940000155876 #33	ENSGT00640000091523 #34	ENSGT00940000163353 #35	ENSGT00940000158126 #36	ENSGT00390000005250 #37
Long-tailed chinchilla	MODERN SPECIES	141	ERMP1 (ENSCLAG00000004784) #8	RIC1 (ENSCLAG00000008085) #9	ENSCLAG00000007197	CD274 (ENSCLAG00000006370) #11	PLGRKT (ENSCLAG00000008570) #12	INSL6 (ENSCLAG00000007423) #14	JAK2 (ENSCLAG00000005091) #15	RCL1 (ENSCLAG00000007445) #16	AK3 (ENSCLAG00000006329) #17	CDC37L1 (ENSCLAG00000005805) #18	PLPP6 (ENSCLAG00000017735) #19	SPATA6L (ENSCLAG00000010497) #20	ENSCLAG00000009476	SLC1A1 (ENSCLAG00000009832) #21	ENSCLAG00000009238	GLIS3 (ENSCLAG00000008116) #22	RFX3 (ENSCLAG00000009044) #23	PUM3 (ENSCLAG00000011892) #24	KCNV2 (ENSCLAG00000013226) #25	VLDLR (ENSCLAG00000007543) #26	SMARCA2 (ENSCLAG00000014484) #28	DMRT2 (ENSCLAG00000006168) #29	DMRT3 (ENSCLAG00000015537) #30	DMRT1 (ENSCLAG00000015238) #31	KANK1 (ENSCLAG00000015509) #32	DOCK8 (ENSCLAG00000005204) #33	ENSCLAG00000005076 #34	ENSCLAG00000006762 #35	PGM5 (ENSCLAG00000005854) #36	TMEM252 (ENSCLAG00000005523) #37	PIP5K1B (ENSCLAG00000011292)
Degu	MODERN SPECIES	128	MLANA (ENSODEG00000005368) #7	ERMP1 (ENSODEG00000005254) #8	RIC1 (ENSODEG00000004340) #9	CD274 (ENSODEG00000004298) #11	PLGRKT (ENSODEG00000004267) #12	INSL6 (ENSODEG00000004231) #14	ENSODEG00000004220	JAK2 (ENSODEG00000004208) #15	RCL1 (ENSODEG00000004151) #16	ENSODEG00000004121 #17	CDC37L1 (ENSODEG00000004185) #18	PLPP6 (ENSODEG00000019026) #19	SPATA6L (ENSODEG00000004066) #20	ENSODEG00000003949	SLC1A1 (ENSODEG00000003884) #21	GLIS3 (ENSODEG00000003731) #22	RFX3 (ENSODEG00000003682) #23	ENSODEG00000003625 #24	KCNV2 (ENSODEG00000003536) #25	ENSODEG00000003492 #26	ENSODEG00000006378	SMARCA2 (ENSODEG00000005452) #28	DMRT2 (ENSODEG00000004992) #29	DMRT3 (ENSODEG00000004984) #30	DMRT1 (ENSODEG00000004898) #31	KANK1 (ENSODEG00000004766) #32	ENSODEG00000004719	ENSODEG00000004711 #33	ENSODEG00000004602 #33	ENSODEG00000004467 #33	ENSODEG00000003983 #34
Guinea pig	MODERN SPECIES	21	MLANA (ENSCPOG00000013436) #7	ERMP1 (ENSCPOG00000013432) #8	RIC1 (ENSCPOG00000013425) #9	CD274 (ENSCPOG00000004371) #11	PLGRKT (ENSCPOG00000012720) #12	ENSCPOG00000001365 #13	INSL6 (ENSCPOG00000002694) #14	JAK2 (ENSCPOG00000014653) #15	RCL1 (ENSCPOG00000015354) #16	AK3 (ENSCPOG00000011927) #17	CDC37L1 (ENSCPOG00000030938) #18	SPATA6L (ENSCPOG00000012925) #20	PLPP6 (ENSCPOG00000012931) #19	SLC1A1 (ENSCPOG00000011151) #21	ENSCPOG00000030794	GLIS3 (ENSCPOG00000005523) #22	RFX3 (ENSCPOG00000000900) #23	ENSCPOG00000008552 #24	KCNV2 (ENSCPOG00000032893) #25	VLDLR (ENSCPOG00000007685) #26	SMARCA2 (ENSCPOG00000005475) #28	DMRT2 (ENSCPOG00000008452) #29	DMRT3 (ENSCPOG00000005912) #30	DMRT1 (ENSCPOG00000005909) #31	KANK1 (ENSCPOG00000008389) #32	DOCK8 (ENSCPOG00000008366) #33	ENSCPOG00000019718 #34	PGM5 (ENSCPOG00000015031) #36	TMEM252 (ENSCPOG00000013771) #37	PABIR1 (ENSCPOG00000003280)	PIP5K1B (ENSCPOG00000004288)
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000034164 #7	ERMP1 (ENSHGLG00000018719) #8	RIC1 (ENSHGLG00000011155) #9	CD274 (ENSHGLG00000016786) #11	PLGRKT (ENSHGLG00000037089) #12	ENSHGLG00000019539 #13	JAK2 (ENSHGLG00000011890) #15	ENSHGLG00000016452 #16	ENSHGLG00000018975 #17	CDC37L1 (ENSHGLG00000012329) #18	SPATA6L (ENSHGLG00000018477) #20	PLPP6 (ENSHGLG00000038858) #19	SLC1A1 (ENSHGLG00000015155) #21	ENSHGLG00000017534	ENSHGLG00000032696	ENSHGLG00000015091 #22	ENSHGLG00000018913 #23	ENSHGLG00000019207	ENSHGLG00000042585	ENSHGLG00000016314	ENSHGLG00000015868 #24	KCNV2 (ENSHGLG00000015810) #25	VLDLR (ENSHGLG00000016113) #26	ENSHGLG00000016566	ENSHGLG00000035043	ENSHGLG00000005215 #28	ENSHGLG00000013697	ENSHGLG00000035319	ENSHGLG00000036415	ENSHGLG00000033430 #29	DMRT3 (ENSHGLG00000012858) #30
Lagomorpha	ANCESTRAL SPECIES	68	ENSGT00530000063839 #8	ENSGT00390000002955 #9	ENSGT00940000161430 #11	ENSGT00390000000375 #12	ENSGT00940000154434.b #14	ENSGT00940000155640 #15	ENSGT00530000063404.a #16	ENSGT00940000155120 #17	ENSGT00390000013443.d #18	ENSGT00940000160907 #19	ENSGT00530000063821.b.b #20	ENSGT00940000155397.b #21	ENSGT00950000183016.E.b.b	ENSGT01050000244818	ENSGT00940000153064.b.d	ENSGT00940000156896 #22	ENSGT01050000244879.a.a.b #23
Rabbit	MODERN SPECIES		ENSOCUG00000037426	ENSOCUG00000031086	INSL6 (ENSOCUG00000013682) #14	ENSOCUG00000037721	JAK2 (ENSOCUG00000016853) #15	RCL1 (ENSOCUG00000008161) #16	ENSOCUG00000013279	ENSOCUG00000011411 #17	CDC37L1 (ENSOCUG00000003468) #18	SPATA6L (ENSOCUG00000003455) #20	PLPP6 (ENSOCUG00000003465) #19	ENSOCUG00000022202 #21	ENSOCUG00000026987	ENSOCUG00000013264 #21	ENSOCUG00000036407	GLIS3 (ENSOCUG00000023004) #22	ENSOCUG00000027590	ENSOCUG00000023393	RFX3 (ENSOCUG00000014086) #23	ENSOCUG00000039572	ENSOCUG00000004189 #24	KCNV2 (ENSOCUG00000004385) #25	VLDLR (ENSOCUG00000002231) #26	ENSOCUG00000022775	SMARCA2 (ENSOCUG00000006320) #28	ENSOCUG00000000241	ENSOCUG00000035677	ENSOCUG00000023438	ENSOCUG00000034834	ENSOCUG00000037388	DMRT2 (ENSOCUG00000003299) #29
Pika	MODERN SPECIES	83																GLIS3 (ENSOPRG00000011679) #22
Tree shrew	MODERN SPECIES	198																ENSTBEG00000008004 #22