Euteleostomi ANCESTRAL SPECIES 24 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00660000097148 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000155876 #34 ENSGT00940000164995 ENSGT00640000091523 #35 ENSGT00940000157140.a ENSGT00940000158126 #36 ENSGT00390000005250 #37 Sarcopterygii ANCESTRAL SPECIES 81 ENSGT00390000008296.b.a.a ENSGT00390000008296.b.b ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000154396.a ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00660000097148 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 Tetrapoda ANCESTRAL SPECIES 2 ENSGT00390000008296.b.b ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000154396.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00660000097148 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00940000164995 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Amniota ANCESTRAL SPECIES 4 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00940000164995 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000158126 #36 Mammalia ANCESTRAL SPECIES 24 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000160907 #20 ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00940000164995 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000163353 Theria ANCESTRAL SPECIES 30 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00940000164995 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000163353 Eutheria ANCESTRAL SPECIES 7 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00940000164995 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Pecora ANCESTRAL SPECIES 30 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000160907 #20 ENSGT00940000155397.b #21 ENSGT00660000097148 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Percora_a ANCESTRAL SPECIES 24 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00660000097148 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Bovidae ANCESTRAL SPECIES 14 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00660000097148 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Caprinae ANCESTRAL SPECIES 14 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000160907 #20 ENSGT00940000155397.b #21 ENSGT00660000097148 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Rambouillet Sheep MODERN SPECIES 11 ENSOARG00020009072 #7 ERMP1 (ENSOARG00020008927) #8 RIC1 (ENSOARG00020008132) #9 ENSOARG00020008062 #10 ENSOARG00020008038 #11 CD274 (ENSOARG00020007985) #12 PLGRKT (ENSOARG00020007941) #13 ENSOARG00020007887 #14 JAK2 (ENSOARG00020007686) #15 RCL1 (ENSOARG00020007598) #16 AK3 (ENSOARG00020007523) #17 CDC37L1 (ENSOARG00020007479) #18 ENSOARG00020007455 #19 PLPP6 (ENSOARG00020007422) #20 SLC1A1 (ENSOARG00020007364) #21 GLIS3 (ENSOARG00020007233) #22 RFX3 (ENSOARG00020006756) #23 ENSOARG00020006681 #24 PUM3 (ENSOARG00020006587) #25 KCNV2 (ENSOARG00020006537) #26 ENSOARG00020024556 #27 VLDLR (ENSOARG00020024482) #28 SMARCA2 (ENSOARG00020024243) #29 DMRT2 (ENSOARG00020024148) #30 DMRT3 (ENSOARG00020024138) #31 DMRT1 (ENSOARG00020024107) #32 KANK1 (ENSOARG00020024004) #33 DOCK8 (ENSOARG00020022900) #34 ENSOARG00020022393 #35 PGM5 (ENSOARG00020022177) #36 TMEM252 (ENSOARG00020022146) #37 Goat MODERN SPECIES 27 ERMP1 (ENSCHIG00000026817) #8 RIC1 (ENSCHIG00000021856) #9 PDCD1LG2 (ENSCHIG00000024438) CD274 (ENSCHIG00000017335) #12 PLGRKT (ENSCHIG00000017669) #13 JAK2 (ENSCHIG00000003903) #15 INSL6 (ENSCHIG00000020505) #14 RCL1 (ENSCHIG00000012407) #16 AK3 (ENSCHIG00000024602) #17 CDC37L1 (ENSCHIG00000025238) #18 ENSCHIG00000010369 ##19 SPATA6L (ENSCHIG00000020946) PLPP6 (ENSCHIG00000001745) #20 SLC1A1 (ENSCHIG00000018337) #21 ENSCHIG00000007959 ENSCHIG00000019534 #22 RFX3 (ENSCHIG00000011556) #23 PUM3 (ENSCHIG00000021559) #25 KCNV2 (ENSCHIG00000011625) #26 VLDLR (ENSCHIG00000021572) #28 ENSCHIG00000012185 #27 SMARCA2 (ENSCHIG00000025863) #29 DMRT2 (ENSCHIG00000020138) #30 DMRT3 (ENSCHIG00000013041) #31 DMRT1 (ENSCHIG00000024212) #32 KANK1 (ENSCHIG00000018134) #33 DOCK8 (ENSCHIG00000014695) #34 ENSCHIG00000024887 #35 ENSCHIG00000006716 PGM5 (ENSCHIG00000006743) #36 TMEM252 (ENSCHIG00000021046) #37 Bovinae ANCESTRAL SPECIES 14 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Bos ANCESTRAL SPECIES 10 ENSGT00940000167431 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Bos_a ANCESTRAL SPECIES 30 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00910000144347.a.a ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00390000009110.fb ENSGT00940000158126 #36 Domestic yak MODERN SPECIES 26 ENSBGRG00000006488 RIC1 (ENSBGRG00000006377) #9 PDCD1LG2 (ENSBGRG00000006267) CD274 (ENSBGRG00000006097) #12 PLGRKT (ENSBGRG00000006032) #13 INSL6 (ENSBGRG00000006012) #14 JAK2 (ENSBGRG00000005982) #15 ENSBGRG00000005967 RCL1 (ENSBGRG00000005812) #16 AK3 (ENSBGRG00000005727) #17 CDC37L1 (ENSBGRG00000005637) #18 ENSBGRG00000005568 PLPP6 (ENSBGRG00000005557) #20 SPATA6L (ENSBGRG00000005420) SLC1A1 (ENSBGRG00000005214) #21 GLIS3 (ENSBGRG00000005123) #22 ENSBGRG00000005096 ENSBGRG00000005081 RFX3 (ENSBGRG00000004985) #23 ENSBGRG00000004951 PUM3 (ENSBGRG00000004833) #25 KCNV2 (ENSBGRG00000004767) #26 VLDLR (ENSBGRG00000004545) #28 SMARCA2 (ENSBGRG00000004107) #29 DMRT2 (ENSBGRG00000003984) #30 DMRT3 (ENSBGRG00000003946) #31 DMRT1 (ENSBGRG00000003868) #32 KANK1 (ENSBGRG00000003717) #33 ENSBGRG00000003655 DOCK8 (ENSBGRG00000003466) #34 ENSBGRG00000002972 #35 Wild yak MODERN SPECIES 841 GLIS3 (ENSBMUG00000013788) #22 RFX3 (ENSBMUG00000013834) #23 ENSBMUG00000013850 PUM3 (ENSBMUG00000013886) #25 KCNV2 (ENSBMUG00000013899) #26 VLDLR (ENSBMUG00000016795) #28 ENSBMUG00000017640 #27 Bos_b ANCESTRAL SPECIES 3 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000160907 #20 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.a.b.b.a Hybrid Bos Indicus MODERN SPECIES 27 RIC1 (ENSBIXG00005019710) #9 ENSBIXG00005019603 PDCD1LG2 (ENSBIXG00005019595) CD274 (ENSBIXG00005003188) #12 PLGRKT (ENSBIXG00005006397) #13 INSL6 (ENSBIXG00005003183) #14 JAK2 (ENSBIXG00005003171) #15 RCL1 (ENSBIXG00005019414) #16 AK3 (ENSBIXG00005019326) #17 CDC37L1 (ENSBIXG00005019277) #18 SPATA6L (ENSBIXG00005019220) ENSBIXG00005019159 PLPP6 (ENSBIXG00005019138) #20 SLC1A1 (ENSBIXG00005019133) #21 ENSBIXG00005019106 GLIS3 (ENSBIXG00005002642) #22 RFX3 (ENSBIXG00005003091) #23 ENSBIXG00005018899 PUM3 (ENSBIXG00005018805) #25 KCNV2 (ENSBIXG00005018778) #26 VLDLR (ENSBIXG00005003037) #28 ENSBIXG00005005990 #27 SMARCA2 (ENSBIXG00005018551) #29 DMRT2 (ENSBIXG00005018266) #30 DMRT3 (ENSBIXG00005018199) #31 DMRT1 (ENSBIXG00005018189) #32 KANK1 (ENSBIXG00005018119) #33 DOCK8 (ENSBIXG00005002913) #34 ENSBIXG00005017167 #35 ENSBIXG00005016626 PGM5 (ENSBIXG00005016605) #36 American bison MODERN SPECIES 3328 CD274 (ENSBBBG00000015809) #12 PLGRKT (ENSBBBG00000015820) #13 INSL6 (ENSBBBG00000015826) #14 JAK2 (ENSBBBG00000015845) #15 RCL1 (ENSBBBG00000015884) #16 AK3 (ENSBBBG00000003960) #17 CDC37L1 (ENSBBBG00000002586) #18 ENSBBBG00000003969 PLPP6 (ENSBBBG00000015953) #20 SPATA6L (ENSBBBG00000015978) SLC1A1 (ENSBBBG00000015989) #21 GLIS3 (ENSBBBG00000016019) #22 RFX3 (ENSBBBG00000003993) #23 PUM3 (ENSBBBG00000007035) #25 KCNV2 (ENSBBBG00000016123) #26 ENSBBBG00000007174 #27 VLDLR (ENSBBBG00000008333) #28 ENSBBBG00000016209 SMARCA2 (ENSBBBG00000004105) #29 DMRT2 (ENSBBBG00000016627) #30 DMRT3 (ENSBBBG00000016636) #31 DMRT1 (ENSBBBG00000016649) #32 KANK1 (ENSBBBG00000007906) #33 ENSBBBG00000000733 DOCK8 (ENSBBBG00000017006) #34 ENSBBBG00000017865 #35 ENSBBBG00000017925 Siberian musk deer MODERN SPECIES 111 PLGRKT (ENSMMSG00000001829) #13 INSL6 (ENSMMSG00000001838) #14 JAK2 (ENSMMSG00000001846) #15 ENSMMSG00000001874 RCL1 (ENSMMSG00000001886) #16 AK3 (ENSMMSG00000001923) #17 CDC37L1 (ENSMMSG00000001936) #18 SPATA6L (ENSMMSG00000001959) PLPP6 (ENSMMSG00000002003) #20 SLC1A1 (ENSMMSG00000002015) #21 GLIS3 (ENSMMSG00000002042) #22 RFX3 (ENSMMSG00000002070) #23 ENSMMSG00000002091 PUM3 (ENSMMSG00000002099) #25 KCNV2 (ENSMMSG00000002132) #26 VLDLR (ENSMMSG00000002160) #28 ENSMMSG00000002256 #27 Yarkand deer MODERN SPECIES 21 KIAA2026 (ENSCHYG00000026213) MLANA (ENSCHYG00000026247) ERMP1 (ENSCHYG00000026281) #8 RIC1 (ENSCHYG00000026365) #9 PDCD1LG2 (ENSCHYG00000026474) CD274 (ENSCHYG00000026492) #12 PLGRKT (ENSCHYG00000026504) #13 INSL6 (ENSCHYG00000026514) #14 JAK2 (ENSCHYG00000026521) #15 RCL1 (ENSCHYG00000026548) #16 AK3 (ENSCHYG00000026564) #17 CDC37L1 (ENSCHYG00000026576) #18 SPATA6L (ENSCHYG00000026599) PLPP6 (ENSCHYG00000026621) #20 SLC1A1 (ENSCHYG00000026638) #21 GLIS3 (ENSCHYG00000026667) #22 RFX3 (ENSCHYG00000026695) #23 PUM3 (ENSCHYG00000026723) #25 KCNV2 (ENSCHYG00000026745) #26 VLDLR (ENSCHYG00000026763) #28 ENSCHYG00000026782 #27 SMARCA2 (ENSCHYG00000026820) #29 DMRT2 (ENSCHYG00000026873) #30 DMRT3 (ENSCHYG00000026880) #31 DMRT1 (ENSCHYG00000014189) #32 ENSCHYG00000014288 KANK1 (ENSCHYG00000014368) #33 DOCK8 (ENSCHYG00000014734) #34 ENSCHYG00000015376 #35 ENSCHYG00000016258 PGM5 (ENSCHYG00000016305) #36 Cetacea ANCESTRAL SPECIES 9 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000164995 ENSGT00940000163353 ENSGT00940000158126 #36 Blue whale MODERN SPECIES 17 MLANA (ENSBMSG00010003817) ERMP1 (ENSBMSG00010003832) #8 RIC1 (ENSBMSG00010003869) #9 PDCD1LG2 (ENSBMSG00010003898) CD274 (ENSBMSG00010003928) #12 PLGRKT (ENSBMSG00010003942) #13 ENSBMSG00010003948 ##14 INSL6 (ENSBMSG00010003955) #14 JAK2 (ENSBMSG00010003969) #15 RCL1 (ENSBMSG00010003993) #16 AK3 (ENSBMSG00010004013) #17 CDC37L1 (ENSBMSG00010004036) #18 SPATA6L (ENSBMSG00010004050) PLPP6 (ENSBMSG00010004080) #20 SLC1A1 (ENSBMSG00010004095) #21 GLIS3 (ENSBMSG00010004124) #22 RFX3 (ENSBMSG00010004165) #23 PUM3 (ENSBMSG00010004204) #25 KCNV2 (ENSBMSG00010004219) #26 VLDLR (ENSBMSG00010004233) #28 SMARCA2 (ENSBMSG00010004262) #29 DMRT2 (ENSBMSG00010004396) #30 DMRT3 (ENSBMSG00010004420) #31 DMRT1 (ENSBMSG00010004442) #32 KANK1 (ENSBMSG00010000089) #33 ENSBMSG00010000100 DOCK8 (ENSBMSG00010000177) #34 ENSBMSG00010000431 ENSBMSG00010000512 PGM5 (ENSBMSG00010000557) #36 TMEM252 (ENSBMSG00010000603) #37 Odontoceti ANCESTRAL SPECIES 8 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000165777.a.a ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Sperm whale MODERN SPECIES 20 MLANA (ENSPCTG00005006205) ERMP1 (ENSPCTG00005006142) #8 RIC1 (ENSPCTG00005006024) #9 PDCD1LG2 (ENSPCTG00005005956) CD274 (ENSPCTG00005005931) #12 PLGRKT (ENSPCTG00005005902) #13 ENSPCTG00005005885 ##14 INSL6 (ENSPCTG00005005856) #14 JAK2 (ENSPCTG00005005720) #15 RCL1 (ENSPCTG00005005644) #16 AK3 (ENSPCTG00005005584) #17 CDC37L1 (ENSPCTG00005005531) #18 PLPP6 (ENSPCTG00005005512) #20 SPATA6L (ENSPCTG00005005489) SLC1A1 (ENSPCTG00005005440) #21 GLIS3 (ENSPCTG00005005407) #22 RFX3 (ENSPCTG00005005359) #23 ENSPCTG00005005299 PUM3 (ENSPCTG00005005228) #25 KCNV2 (ENSPCTG00005005193) #26 VLDLR (ENSPCTG00005004995) #28 ENSPCTG00005004736 #29 ENSPCTG00005004691 ENSPCTG00005004671 DMRT2 (ENSPCTG00005004572) #30 DMRT3 (ENSPCTG00005004535) #31 DMRT1 (ENSPCTG00005004498) #32 KANK1 (ENSPCTG00005004438) #33 DOCK8 (ENSPCTG00005004178) #34 ENSPCTG00005004008 #35 ENSPCTG00005003942 Odontoceti_a ANCESTRAL SPECIES 15 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000165777.a.a ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Dolphin MODERN SPECIES 3329 ENSTTRG00000004021 #22 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT01050000244891.A.c.a.a ENSGT00940000165777.a.a ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 Vaquita MODERN SPECIES 17 RANBP6 (ENSPSNG00000020980) KIAA2026 (ENSPSNG00000020897) MLANA (ENSPSNG00000020843) ERMP1 (ENSPSNG00000020793) #8 RIC1 (ENSPSNG00000020684) #9 ENSPSNG00000020589 PLGRKT (ENSPSNG00000020541) #13 ENSPSNG00000020509 ##14 JAK2 (ENSPSNG00000020398) #15 RCL1 (ENSPSNG00000020330) #16 AK3 (ENSPSNG00000020263) #17 CDC37L1 (ENSPSNG00000020228) #18 PLPP6 (ENSPSNG00000020203) #20 SPATA6L (ENSPSNG00000020084) SLC1A1 (ENSPSNG00000019992) #21 GLIS3 (ENSPSNG00000019903) #22 RFX3 (ENSPSNG00000019643) #23 PUM3 (ENSPSNG00000019496) #25 KCNV2 (ENSPSNG00000019443) #26 VLDLR (ENSPSNG00000019297) #28 SMARCA2 (ENSPSNG00000018802) #29 ENSPSNG00000018632 ENSPSNG00000018606 DMRT2 (ENSPSNG00000018429) #30 DMRT3 (ENSPSNG00000018387) #31 DMRT1 (ENSPSNG00000018301) #32 KANK1 (ENSPSNG00000018178) #33 DOCK8 (ENSPSNG00000016745) #34 ENSPSNG00000016463 #35 ENSPSNG00000016403 PGM5 (ENSPSNG00000016170) #36 Monodontidae ANCESTRAL SPECIES 5 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT01050000244891.A.c.a.a ENSGT00940000165777.a.a ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 Beluga whale MODERN SPECIES 50 RIC1 (ENSDLEG00000019725) #9 PDCD1LG2 (ENSDLEG00000019719) CD274 (ENSDLEG00000019715) #12 PLGRKT (ENSDLEG00000019711) #13 RLN1 (ENSDLEG00000019703) ##14 ENSDLEG00000019692 #14 JAK2 (ENSDLEG00000019680) #15 RCL1 (ENSDLEG00000019668) #16 AK3 (ENSDLEG00000019654) #17 CDC37L1 (ENSDLEG00000019644) #18 PLPP6 (ENSDLEG00000019637) #20 ENSDLEG00000019609 ENSDLEG00000019547 SLC1A1 (ENSDLEG00000019531) #21 ENSDLEG00000019522 ENSDLEG00000019514 #22 RFX3 (ENSDLEG00000019460) #23 PUM3 (ENSDLEG00000019389) #25 KCNV2 (ENSDLEG00000019382) #26 VLDLR (ENSDLEG00000019340) #28 SMARCA2 (ENSDLEG00000019318) #29 ENSDLEG00000019309 ENSDLEG00000019303 DMRT2 (ENSDLEG00000019289) #30 ENSDLEG00000019284 ##30 DMRT3 (ENSDLEG00000019280) #31 DMRT1 (ENSDLEG00000019261) #32 KANK1 (ENSDLEG00000019090) #33 DOCK8 (ENSDLEG00000012329) #34 ENSDLEG00000011652 #35 ENSDLEG00000011631 Narwhal MODERN SPECIES 312 MLANA (ENSMMNG00015020456) ERMP1 (ENSMMNG00015020481) #8 RIC1 (ENSMMNG00015020565) #9 PDCD1LG2 (ENSMMNG00015020694) CD274 (ENSMMNG00015020739) #12 PLGRKT (ENSMMNG00015020757) #13 ENSMMNG00015020775 ##14 ENSMMNG00015020785 #14 JAK2 (ENSMMNG00015020808) #15 RCL1 (ENSMMNG00015020841) #16 AK3 (ENSMMNG00015020890) #17 CDC37L1 (ENSMMNG00015020918) #18 SPATA6L (ENSMMNG00015020944) PLPP6 (ENSMMNG00015020983) #20 SLC1A1 (ENSMMNG00015020990) #21 GLIS3 (ENSMMNG00015021011) #22 RFX3 (ENSMMNG00015021042) #23 ENSMMNG00015021179 PUM3 (ENSMMNG00015021202) #25 KCNV2 (ENSMMNG00015021226) #26 VLDLR (ENSMMNG00015021252) #28 SMARCA2 (ENSMMNG00015021345) #29 ENSMMNG00015021422 ENSMMNG00015021427 DMRT2 (ENSMMNG00015013077) #30 DMRT3 (ENSMMNG00015013099) #31 DMRT1 (ENSMMNG00015013112) #32 KANK1 (ENSMMNG00015013138) #33 DOCK8 (ENSMMNG00015013245) #34 ENSMMNG00015013419 #35 ENSMMNG00015013464 Camelidae ANCESTRAL SPECIES 5 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.e ##14 ENSGT00940000154434.a.f ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00940000169111 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000164995 Alpaca MODERN SPECIES 2898 GLIS3 (ENSVPAG00000005473) #22 RFX3 (ENSVPAG00000005472) #23 Arabian camel MODERN SPECIES 30 ERMP1 (ENSCDRG00005005148) #8 RIC1 (ENSCDRG00005004883) #9 PDCD1LG2 (ENSCDRG00005004849) CD274 (ENSCDRG00005004734) #12 ENSCDRG00005004708 ##14 PLGRKT (ENSCDRG00005004613) #13 ENSCDRG00005004570 ##14 INSL6 (ENSCDRG00005004548) #14 JAK2 (ENSCDRG00005004520) #15 RCL1 (ENSCDRG00005004458) #16 AK3 (ENSCDRG00005004398) #17 CDC37L1 (ENSCDRG00005004358) #18 PLPP6 (ENSCDRG00005004350) #20 SPATA6L (ENSCDRG00005004284) SLC1A1 (ENSCDRG00005004192) #21 GLIS3 (ENSCDRG00005004109) #22 RFX3 (ENSCDRG00005004007) #23 ENSCDRG00005003916 PUM3 (ENSCDRG00005003846) #25 KCNV2 (ENSCDRG00005003822) #26 VLDLR (ENSCDRG00005003699) #28 ENSCDRG00005003352 #29 DMRT2 (ENSCDRG00005003248) #30 DMRT3 (ENSCDRG00005003237) #31 DMRT1 (ENSCDRG00005003226) #32 KANK1 (ENSCDRG00005003188) #33 DOCK8 (ENSCDRG00005003115) #34 ENSCDRG00005003094 ENSCDRG00005002760 #35 ENSCDRG00005002664 PGM5 (ENSCDRG00005002644) #36 Suina ANCESTRAL SPECIES 23 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00520000061590 #27 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Chacoan peccary MODERN SPECIES 20 ENSCWAG00000021040 PDCD1LG2 (ENSCWAG00000021026) CD274 (ENSCWAG00000021014) #12 PLGRKT (ENSCWAG00000021002) #13 ENSCWAG00000020963 ##14 INSL6 (ENSCWAG00000020954) #14 JAK2 (ENSCWAG00000020930) #15 ENSCWAG00000020920 ENSCWAG00000020913 RCL1 (ENSCWAG00000020883) #16 AK3 (ENSCWAG00000020856) #17 CDC37L1 (ENSCWAG00000020832) #18 PLPP6 (ENSCWAG00000020823) #20 SPATA6L (ENSCWAG00000020801) SLC1A1 (ENSCWAG00000020776) #21 GLIS3 (ENSCWAG00000020767) #22 ENSCWAG00000020759 RFX3 (ENSCWAG00000020726) #23 PUM3 (ENSCWAG00000020700) #25 KCNV2 (ENSCWAG00000020693) #26 ENSCWAG00000020684 #27 VLDLR (ENSCWAG00000020653) #28 SMARCA2 (ENSCWAG00000020512) #29 ENSCWAG00000020471 DMRT2 (ENSCWAG00000020422) #30 DMRT3 (ENSCWAG00000020400) #31 DMRT1 (ENSCWAG00000020382) #32 KANK1 (ENSCWAG00000020332) #33 DOCK8 (ENSCWAG00000019884) #34 ENSCWAG00000019496 #35 ENSCWAG00000019440 Pig MODERN SPECIES ENSSSCG00000005209 PDCD1LG2 (ENSSSCG00000032561) CD274 (ENSSSCG00000005211) #12 PLGRKT (ENSSSCG00000005212) #13 ENSSSCG00000005216 ##14 INSL6 (ENSSSCG00000005214) #14 JAK2 (ENSSSCG00000005215) #15 ENSSSCG00000052472 ENSSSCG00000005217 #16 ENSSSCG00000058562 #16 AK3 (ENSSSCG00000023595) #17 CDC37L1 (ENSSSCG00000005219) #18 SPATA6L (ENSSSCG00000005221) PLPP6 (ENSSSCG00000005220) #20 SLC1A1 (ENSSSCG00000005222) #21 GLIS3 (ENSSSCG00000005224) #22 RFX3 (ENSSSCG00000005225) #23 ENSSSCG00000039823 PUM3 (ENSSSCG00000005227) #25 KCNV2 (ENSSSCG00000005228) #26 VLDLR (ENSSSCG00000005229) #28 ENSSSCG00000040670 #27 ENSSSCG00000052990 ENSSSCG00000041522 ENSSSCG00000005232 #29 ENSSSCG00000057314 #29 ENSSSCG00000032324 ENSSSCG00000044946 ##24 ENSSSCG00000046403 DMRT2 (ENSSSCG00000005233) #30 DMRT3 (ENSSSCG00000040481) #31 Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Carnivora ANCESTRAL SPECIES 25 ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Caniformia ANCESTRAL SPECIES 29 ENSGT00950000183043.a.b.b.a.a.b.h ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00940000164995 ENSGT00640000091523 #35 Caniformia_b ANCESTRAL SPECIES 32 ENSGT00950000183043.a.b.b.a.a.b.h ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Ursidae ANCESTRAL SPECIES 43 ENSGT00940000160228 ENSGT00950000183043.a.b.b.a.a.b.h ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Ursus ANCESTRAL SPECIES 50 ENSGT00530000063839.h #8 ENSGT00530000063839.g #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120.hb.a #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000166172 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Polar bear MODERN SPECIES 171 ENSUMAG00000016678 ENSUMAG00000016687 #8 ENSUMAG00000016690 #8 RIC1 (ENSUMAG00000016695) #9 PDCD1LG2 (ENSUMAG00000016707) CD274 (ENSUMAG00000016708) #12 ENSUMAG00000016719 #13 INSL6 (ENSUMAG00000016724) #14 JAK2 (ENSUMAG00000016820) #15 RCL1 (ENSUMAG00000017890) #16 ENSUMAG00000017904 #17 CDC37L1 (ENSUMAG00000017926) #18 SPATA6L (ENSUMAG00000017942) ENSUMAG00000017954 #20 SLC1A1 (ENSUMAG00000017970) #21 GLIS3 (ENSUMAG00000018031) #22 RFX3 (ENSUMAG00000018101) #23 ENSUMAG00000018118 ENSUMAG00000018187 PUM3 (ENSUMAG00000018443) #25 KCNV2 (ENSUMAG00000018690) #26 VLDLR (ENSUMAG00000018747) #28 ENSUMAG00000019303 #29 ENSUMAG00000019328 #29 DMRT2 (ENSUMAG00000019339) #30 ENSUMAG00000019350 #32 KANK1 (ENSUMAG00000019362) #33 DOCK8 (ENSUMAG00000019524) #34 ENSUMAG00000020081 #35 PGM5 (ENSUMAG00000020142) #36 TMEM252 (ENSUMAG00000020280) #37 American black bear MODERN SPECIES 5373 ENSUAMG00000021562 #22 Giant Panda MODERN SPECIES 8 ENSAMEG00000031178 ENSAMEG00000009909 ENSAMEG00000009883 #8 RIC1 (ENSAMEG00000009846) #9 PDCD1LG2 (ENSAMEG00000009830) PLGRKT (ENSAMEG00000009795) #13 CD274 (ENSAMEG00000009800) #12 ENSAMEG00000009780 ##14 INSL6 (ENSAMEG00000009778) #14 JAK2 (ENSAMEG00000009661) #15 RCL1 (ENSAMEG00000002631) #16 AK3 (ENSAMEG00000002640) #17 CDC37L1 (ENSAMEG00000002657) #18 ENSAMEG00000002674 SLC1A1 (ENSAMEG00000002682) #21 GLIS3 (ENSAMEG00000002733) #22 RFX3 (ENSAMEG00000012132) #23 ENSAMEG00000012183 PUM3 (ENSAMEG00000012187) #25 KCNV2 (ENSAMEG00000012228) #26 VLDLR (ENSAMEG00000012233) #28 ENSAMEG00000027822 #27 SMARCA2 (ENSAMEG00000012325) #29 ENSAMEG00000019747 DMRT2 (ENSAMEG00000006648) #30 DMRT3 (ENSAMEG00000006664) #31 KANK1 (ENSAMEG00000006667) #33 DOCK8 (ENSAMEG00000006698) #34 ENSAMEG00000006824 #35 ENSAMEG00000025926 PGM5 (ENSAMEG00000008064) #36 Mustelinae ANCESTRAL SPECIES 87 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000160907 #20 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00940000164995 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Ferret MODERN SPECIES 281 MFSD14B (ENSMPUG00000004866) ENSMPUG00000004873 ERMP1 (ENSMPUG00000004878) #8 ENSMPUG00000004889 #9 ENSMPUG00000004903 #9 PDCD1LG2 (ENSMPUG00000004909) CD274 (ENSMPUG00000004954) #12 ENSMPUG00000004961 ##14 INSL6 (ENSMPUG00000004968) #14 JAK2 (ENSMPUG00000004974) #15 RCL1 (ENSMPUG00000004998) #16 AK3 (ENSMPUG00000005006) #17 CDC37L1 (ENSMPUG00000005018) #18 SPATA6L (ENSMPUG00000005024) SLC1A1 (ENSMPUG00000005081) #21 GLIS3 (ENSMPUG00000005095) #22 RFX3 (ENSMPUG00000005101) #23 ENSMPUG00000005120 PUM3 (ENSMPUG00000005125) #25 KCNV2 (ENSMPUG00000005137) #26 VLDLR (ENSMPUG00000005155) #28 ENSMPUG00000005169 SMARCA2 (ENSMPUG00000005171) #29 ENSMPUG00000005192 DMRT2 (ENSMPUG00000005199) #30 DMRT1 (ENSMPUG00000005204) #32 KANK1 (ENSMPUG00000005216) #33 DOCK8 (ENSMPUG00000005223) #34 ENSMPUG00000005707 American mink MODERN SPECIES 365 PLGRKT (ENSNVIG00000021188) #13 ENSNVIG00000021190 ##14 INSL6 (ENSNVIG00000021192) #14 JAK2 (ENSNVIG00000021199) #15 RCL1 (ENSNVIG00000021229) #16 AK3 (ENSNVIG00000021277) #17 CD37L (ENSNVIG00000021293) #18 SPATA6L (ENSNVIG00000021312) PLPP6 (ENSNVIG00000021343) #20 SLC1A1 (ENSNVIG00000021350) #21 GLIS3 (ENSNVIG00000021365) #22 Canidae ANCESTRAL SPECIES 47 ENSGT00950000183043.a.b.b.a.a.b.h ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120.lb.b #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Canis_lupus ANCESTRAL SPECIES ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT01050000248397 ENSGT00530000063404.a #16 ENSGT00940000155120.lb.b #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00950000182772.A.a.b.n.b ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00950000183030.m.a.b.a.a.a Dingo MODERN SPECIES 125 PDCD1LG2 (ENSCAFG00020005060) CD274 (ENSCAFG00020005055) #12 PLGRKT (ENSCAFG00020005050) #13 ENSCAFG00020005012 ##14 INSL6 (ENSCAFG00020005010) #14 JAK2 (ENSCAFG00020001020) #15 ENSCAFG00020000670 ENSCAFG00020000655 RCL1 (ENSCAFG00020000638) #16 ENSCAFG00020000622 ENSCAFG00020000594 #17 CDC37L1 (ENSCAFG00020000516) #18 PLPP6 (ENSCAFG00020000503) #20 SPATA6L (ENSCAFG00020000384) SLC1A1 (ENSCAFG00020000361) #21 GLIS3 (ENSCAFG00020000104) #22 ENSCAFG00020026870 RFX3 (ENSCAFG00020026868) #23 PUM3 (ENSCAFG00020026867) #25 KCNV2 (ENSCAFG00020026866) #26 VLDLR (ENSCAFG00020026865) #28 ENSCAFG00020026863 #27 ENSCAFG00020026802 #29 ENSCAFG00020026766 #29 ENSCAFG00020026759 DMRT2 (ENSCAFG00020026753) #30 DMRT3 (ENSCAFG00020026752) #31 DMRT1 (ENSCAFG00020026750) #32 KANK1 (ENSCAFG00020026742) #33 DOCK8 (ENSCAFG00020026637) #34 ENSCAFG00020026627 Dog MODERN SPECIES PDCD1LG2 (ENSCAFG00845016232) CD274 (ENSCAFG00845016107) #12 PLGRKT (ENSCAFG00845016070) #13 RLN2 (ENSCAFG00845016044) ##14 INSL6 (ENSCAFG00845016024) #14 ENSCAFG00845016006 JAK2 (ENSCAFG00845015887) #15 ENSCAFG00845015836 JAK2 (ENSCAFG00845015728) #16 ENSCAFG00845015667 ENSCAFG00845015626 #17 CDC37L1 (ENSCAFG00845015553) #18 PLPP6 (ENSCAFG00845002916) #20 SPATA6L (ENSCAFG00845002856) SLC1A1 (ENSCAFG00845002818) #21 GLIS3 (ENSCAFG00845002759) #22 ENSCAFG00845002739 RFX3 (ENSCAFG00845002562) #23 ENSCAFG00845002474 PUM3 (ENSCAFG00845002440) #25 KCNV2 (ENSCAFG00845002424) #26 VLDLR (ENSCAFG00845002345) #28 SMARCA2 (ENSCAFG00845002161) #29 ENSCAFG00845002045 DMRT2 (ENSCAFG00845002026) #30 DMRT3 (ENSCAFG00845002003) #31 DMRT1 (ENSCAFG00845001983) #32 KANK1 (ENSCAFG00845001908) #33 DOCK8 (ENSCAFG00845001647) #34 ZNG1A (ENSCAFG00845001577) #35 ENSCAFG00845001539 Red fox MODERN SPECIES 37 ENSVVUG00000007464 ERMP1 (ENSVVUG00000007447) #8 RIC1 (ENSVVUG00000007409) #9 PDCD1LG2 (ENSVVUG00000007366) PLGRKT (ENSVVUG00000007362) #13 ENSVVUG00000007360 ##14 CD274 (ENSVVUG00000007347) #12 INSL6 (ENSVVUG00000007335) #14 JAK2 (ENSVVUG00000007315) #15 RCL1 (ENSVVUG00000007304) #16 AK3 (ENSVVUG00000007282) #17 CDC37L1 (ENSVVUG00000007275) #18 ENSVVUG00000007267 #20 SPATA6L (ENSVVUG00000007223) SLC1A1 (ENSVVUG00000007200) #21 GLIS3 (ENSVVUG00000007122) #22 RFX3 (ENSVVUG00000006609) #23 ENSVVUG00000006545 PUM3 (ENSVVUG00000006527) #25 KCNV2 (ENSVVUG00000006518) #26 ENSVVUG00000006514 #27 VLDLR (ENSVVUG00000004925) #28 ENSVVUG00000004598 #29 ENSVVUG00000004580 #29 DMRT2 (ENSVVUG00000004562) #30 DMRT3 (ENSVVUG00000004555) #31 DMRT1 (ENSVVUG00000004545) #32 KANK1 (ENSVVUG00000004494) #33 DOCK8 (ENSVVUG00000004407) #34 ENSVVUG00000004359 #35 PGM5 (ENSVVUG00000004340) #36 Felidae ANCESTRAL SPECIES 28 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000155028.q.b.e.b ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Panthera ANCESTRAL SPECIES 34 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000155028.q.b.e.b ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Panthera_a ANCESTRAL SPECIES 35 ENSGT00940000160228 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 lion MODERN SPECIES 13 ENSPLOG00000019445 ERMP1 (ENSPLOG00000019376) #8 RIC1 (ENSPLOG00000019269) #9 PDCD1LG2 (ENSPLOG00000019232) CD274 (ENSPLOG00000019211) #12 PLGRKT (ENSPLOG00000019176) #13 ENSPLOG00000019152 ##14 INSL6 (ENSPLOG00000019128) #14 JAK2 (ENSPLOG00000019062) #15 RCL1 (ENSPLOG00000019004) #16 AK3 (ENSPLOG00000018913) #17 CDC37L1 (ENSPLOG00000018840) #18 PLPP6 (ENSPLOG00000018812) #20 SPATA6L (ENSPLOG00000018652) SLC1A1 (ENSPLOG00000018538) #21 GLIS3 (ENSPLOG00000018479) #22 RFX3 (ENSPLOG00000018336) #23 ENSPLOG00000018220 PUM3 (ENSPLOG00000018076) #25 KCNV2 (ENSPLOG00000018027) #26 VLDLR (ENSPLOG00000017962) #28 ENSPLOG00000017911 #27 SMARCA2 (ENSPLOG00000017478) #29 DMRT2 (ENSPLOG00000017190) #30 DMRT3 (ENSPLOG00000017150) #31 DMRT1 (ENSPLOG00000017065) #32 KANK1 (ENSPLOG00000016894) #33 DOCK8 (ENSPLOG00000015754) #34 ENSPLOG00000014827 #35 ENSPLOG00000014655 PGM5 (ENSPLOG00000014414) #36 leopard MODERN SPECIES 42 SPTLC1 (ENSPPRG00000023598) ENSPPRG00000023237 ERMP1 (ENSPPRG00000023169) #8 RIC1 (ENSPPRG00000022984) #9 PDCD1LG2 (ENSPPRG00000022891) CD274 (ENSPPRG00000022858) #12 PLGRKT (ENSPPRG00000022792) #13 INSL6 (ENSPPRG00000022777) #14 JAK2 (ENSPPRG00000022744) #15 RCL1 (ENSPPRG00000022645) #16 AK3 (ENSPPRG00000000041) #17 CDC37L1 (ENSPPRG00000000059) #18 PLPP6 (ENSPPRG00000019670) #20 SPATA6L (ENSPPRG00000000218) SLC1A1 (ENSPPRG00000000232) #21 GLIS3 (ENSPPRG00000000400) #22 RFX3 (ENSPPRG00000000606) #23 ENSPPRG00000000748 PUM3 (ENSPPRG00000000809) #25 KCNV2 (ENSPPRG00000000862) #26 VLDLR (ENSPPRG00000000915) #28 ENSPPRG00000001027 #27 SMARCA2 (ENSPPRG00000001879) #29 DMRT2 (ENSPPRG00000002109) #30 DMRT3 (ENSPPRG00000002367) #31 DMRT1 (ENSPPRG00000002380) #32 KANK1 (ENSPPRG00000002516) #33 DOCK8 (ENSPPRG00000003143) #34 ENSPPRG00000005315 #35 ENSPPRG00000005661 PGM5 (ENSPPRG00000005783) #36 Tiger MODERN SPECIES 463 ENSPTIG00000012403 ERMP1 (ENSPTIG00000005202) #8 RIC1 (ENSPTIG00000007073) #9 PDCD1LG2 (ENSPTIG00000013516) CD274 (ENSPTIG00000014398) #12 PLGRKT (ENSPTIG00000015914) #13 ENSPTIG00000016439 ##14 INSL6 (ENSPTIG00000016722) #14 JAK2 (ENSPTIG00000016939) #15 RCL1 (ENSPTIG00000019031) #16 AK3 (ENSPTIG00000000703) #17 CDC37L1 (ENSPTIG00000008469) #18 SPATA6L (ENSPTIG00000011794) SLC1A1 (ENSPTIG00000013599) #21 ENSPTIG00000014983 GLIS3 (ENSPTIG00000015969) #22 RFX3 (ENSPTIG00000017617) #23 ENSPTIG00000021167 PUM3 (ENSPTIG00000021934) #25 VLDLR (ENSPTIG00000005593) #28 ENSPTIG00000009737 #27 ENSPTIG00000010794 #29 ENSPTIG00000015817 #29 Cat MODERN SPECIES 244 ERMP1 (ENSFCAG00000014912) #8 RIC1 (ENSFCAG00000014910) #9 PDCD1LG2 (ENSFCAG00000009048) CD274 (ENSFCAG00000009047) #12 PLGRKT (ENSFCAG00000039638) #13 RLN (ENSFCAG00000011471) ##14 INSL6 (ENSFCAG00000044599) #14 JAK2 (ENSFCAG00000028588) #15 RCL1 (ENSFCAG00000014557) #16 AK3 (ENSFCAG00000028063) #17 CDC37L1 (ENSFCAG00000027076) #18 SPATA6L (ENSFCAG00000002369) PLPP6 (ENSFCAG00000038113) #20 SLC1A1 (ENSFCAG00000023590) #21 ENSFCAG00000037557 GLIS3 (ENSFCAG00000046401) #22 RFX3 (ENSFCAG00000012950) #23 ENSFCAG00000013260 KCNV2 (ENSFCAG00000004335) #26 VLDLR (ENSFCAG00000013257) #28 ENSFCAG00000041218 #27 SMARCA2 (ENSFCAG00000001568) #29 DMRT2 (ENSFCAG00000006461) #30 DMRT3 (ENSFCAG00000036847) #31 DMRT1 (ENSFCAG00000006459) #32 KANK1 (ENSFCAG00000006458) #33 DOCK8 (ENSFCAG00000012046) #34 ENSFCAG00000047266 ENSFCAG00000012045 #35 ENSFCAG00000043244 PGM5 (ENSFCAG00000008050) #36 Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Equus ANCESTRAL SPECIES 37 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Horse MODERN SPECIES 15 ERMP1 (ENSECAG00000018498) #8 RIC1 (ENSECAG00000006558) #9 PDCD1LG2 (ENSECAG00000020578) CD274 (ENSECAG00000016312) #12 PLGRKT (ENSECAG00000051327) #13 PLGRKT (ENSECAG00000015003) ##14 INSL6 (ENSECAG00000053846) #14 JAK2 (ENSECAG00000009119) #15 RCL1 (ENSECAG00000015973) #16 ENSECAG00000058759 AK3 (ENSECAG00000011235) #17 CDC37L1 (ENSECAG00000000269) #18 PLPP6 (ENSECAG00000023969) #20 SPATA6L (ENSECAG00000021902) SLC1A1 (ENSECAG00000010935) #21 GLIS3 (ENSECAG00000020544) #22 RFX3 (ENSECAG00000011075) #23 ENSECAG00000009736 PUM3 (ENSECAG00000017193) #25 KCNV2 (ENSECAG00000016602) #26 ENSECAG00000037169 #27 VLDLR (ENSECAG00000021859) #28 ENSECAG00000045647 #29 ENSECAG00000047891 #29 DMRT2 (ENSECAG00000035701) #30 DMRT3 (ENSECAG00000023412) #31 DMRT1 (ENSECAG00000060160) #32 KANK1 (ENSECAG00000016219) #33 DOCK8 (ENSECAG00000011917) #34 ENSECAG00000041352 ENSECAG00000014036 #35 Donkey MODERN SPECIES 15 MLANA (ENSEASG00005028588) ERMP1 (ENSEASG00005010680) #8 RIC1 (ENSEASG00005010673) #9 PDCD1LG2 (ENSEASG00005010667) CD274 (ENSEASG00005010663) #12 PLGRKT (ENSEASG00005034012) #13 ENSEASG00005010659 ##14 INSL6 (ENSEASG00005037792) #14 JAK2 (ENSEASG00005010656) #15 RCL1 (ENSEASG00005010653) #16 AK3 (ENSEASG00005010651) #17 CDC37L1 (ENSEASG00005010646) #18 SPATA6L (ENSEASG00005010642) PLPP6 (ENSEASG00005010645) #20 SLC1A1 (ENSEASG00005010637) #21 GLIS3 (ENSEASG00005010634) #22 RFX3 (ENSEASG00005010402) #23 ENSEASG00005010358 ENSEASG00005010361 PUM3 (ENSEASG00005010350) #25 KCNV2 (ENSEASG00005010348) #26 VLDLR (ENSEASG00005010330) #28 ENSEASG00005010323 #27 ENSEASG00005033232 #29 ENSEASG00005032228 #29 DMRT2 (ENSEASG00005010307) #30 DMRT3 (ENSEASG00005010303) #31 DMRT1 (ENSEASG00005010297) #32 KANK1 (ENSEASG00005010292) #33 DOCK8 (ENSEASG00005009734) #34 ENSEASG00005009634 #35 Chiroptera ANCESTRAL SPECIES 40 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Megabat MODERN SPECIES 7303 GLIS3 (ENSPVAG00000001839) #22 Microchiroptera ANCESTRAL SPECIES 36 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Greater horseshoe bat MODERN SPECIES 3 PDCD1LG2 (ENSRFEG00010014656) CD274 (ENSRFEG00010014726) #12 PLGRKT (ENSRFEG00010014761) #13 ENSRFEG00010014802 ENSRFEG00010014826 ##14 ENSRFEG00010014899 ##14 INSL6 (ENSRFEG00010014917) #14 JAK2 (ENSRFEG00010014972) #15 RCL1 (ENSRFEG00010015039) #16 AK3 (ENSRFEG00010015150) #17 CDC37L1 (ENSRFEG00010015324) #18 SPATA6L (ENSRFEG00010005120) PLPP6 (ENSRFEG00010005138) #20 ENSRFEG00010005145 SLC1A1 (ENSRFEG00010005159) #21 GLIS3 (ENSRFEG00010005187) #22 RFX3 (ENSRFEG00010005210) #23 ENSRFEG00010005258 ENSRFEG00010005315 #25 KCNV2 (ENSRFEG00010005355) #26 VLDLR (ENSRFEG00010005438) #28 SMARCA2 (ENSRFEG00010005719) #29 DMRT2 (ENSRFEG00010005950) #30 DMRT3 (ENSRFEG00010006020) #31 DMRT1 (ENSRFEG00010006049) #32 KANK1 (ENSRFEG00010006153) #33 DOCK8 (ENSRFEG00010006288) #34 ENSRFEG00010006573 #35 ENSRFEG00010006757 PGM5 (ENSRFEG00010006806) #36 TMEM252 (ENSRFEG00010006856) #37 Microbat DUPLICATION Microbat MODERN SPECIES 1067 ERMP1 (ENSMLUG00000002419) #8 RIC1 (ENSMLUG00000002399) #9 PDCD1LG2 (ENSMLUG00000009533) CD274 (ENSMLUG00000009607) #12 PLGRKT (ENSMLUG00000009582) #13 ENSMLUG00000009569 ##14 INSL6 (ENSMLUG00000007982) #14 JAK2 (ENSMLUG00000012756) #15 RCL1 (ENSMLUG00000009654) #16 AK3 (ENSMLUG00000017272) #17 CDC37L1 (ENSMLUG00000017270) #18 PLPP6 (ENSMLUG00000017269) #20 SPATA6L (ENSMLUG00000012996) ENSMLUG00000012988 #21 ENSMLUG00000014482 #22 ENSMLUG00000030513 #22 RFX3 (ENSMLUG00000013765) #23 ENSMLUG00000022735 PUM3 (ENSMLUG00000002309) #25 KCNV2 (ENSMLUG00000002304) #26 VLDLR (ENSMLUG00000002294) #28 SMARCA2 (ENSMLUG00000002342) #29 Microbat MODERN SPECIES 1067 ERMP1 (ENSMLUG00000002419) #8 RIC1 (ENSMLUG00000002399) #9 PDCD1LG2 (ENSMLUG00000009533) CD274 (ENSMLUG00000009607) #12 PLGRKT (ENSMLUG00000009582) #13 ENSMLUG00000009569 ##14 INSL6 (ENSMLUG00000007982) #14 JAK2 (ENSMLUG00000012756) #15 RCL1 (ENSMLUG00000009654) #16 AK3 (ENSMLUG00000017272) #17 CDC37L1 (ENSMLUG00000017270) #18 PLPP6 (ENSMLUG00000017269) #20 SPATA6L (ENSMLUG00000012996) ENSMLUG00000012988 #21 ENSMLUG00000014482 #22 ENSMLUG00000030513 #22 RFX3 (ENSMLUG00000013765) #23 ENSMLUG00000022735 PUM3 (ENSMLUG00000002309) #25 KCNV2 (ENSMLUG00000002304) #26 VLDLR (ENSMLUG00000002294) #28 SMARCA2 (ENSMLUG00000002342) #29 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000156896 #22 Common shrew MODERN SPECIES 622 GLIS3 (ENSSARG00000011464) #22 Hedgehog MODERN SPECIES 1042 GLIS3 (ENSEEUG00000004107) #22 Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Primates ANCESTRAL SPECIES 9 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Strepsirrhini DUPLICATION Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896.q #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Lemuriformes ANCESTRAL SPECIES 59 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896.q #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Lemuriformes_a ANCESTRAL SPECIES 86 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896.q #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523.s #35 ENSGT00940000163353 ENSGT00940000158126 #36 Coquerels sifaka MODERN SPECIES 549 RCL1 (ENSPCOG00000009611) #16 ENSPCOG00000024436 #17 CDC37L1 (ENSPCOG00000025983) #18 PLPP6 (ENSPCOG00000013586) #20 SPATA6L (ENSPCOG00000001879) SLC1A1 (ENSPCOG00000013653) #21 GLIS3 (ENSPCOG00000022619) #22 RFX3 (ENSPCOG00000022172) #23 PUM3 (ENSPCOG00000027325) #25 KCNV2 (ENSPCOG00000023607) #26 VLDLR (ENSPCOG00000026506) #28 ENSPCOG00000019796 #27 ENSPCOG00000026110 SMARCA2 (ENSPCOG00000025709) #29 Greater bamboo lemur MODERN SPECIES 152 PDCD1LG2 (ENSPSMG00000024781) CD274 (ENSPSMG00000024783) #12 PLGRKT (ENSPSMG00000024787) #13 ENSPSMG00000024791 ##14 INSL6 (ENSPSMG00000024793) #14 ENSPSMG00000024795 JAK2 (ENSPSMG00000024838) #15 RCL1 (ENSPSMG00000024848) #16 AK3 (ENSPSMG00000024859) #17 CDC37L1 (ENSPSMG00000024864) #18 SPATA6L (ENSPSMG00000024878) PLPP6 (ENSPSMG00000024881) #20 SLC1A1 (ENSPSMG00000024890) #21 GLIS3 (ENSPSMG00000024897) #22 RFX3 (ENSPSMG00000024938) #23 ENSPSMG00000024950 ENSPSMG00000024956 #25 KCNV2 (ENSPSMG00000024960) #26 VLDLR (ENSPSMG00000025041) #28 ENSPSMG00000025075 #27 SMARCA2 (ENSPSMG00000025173) #29 ENSPSMG00000025195 DMRT2 (ENSPSMG00000025206) #30 DMRT3 (ENSPSMG00000025210) #31 DMRT1 (ENSPSMG00000025222) #32 KANK1 (ENSPSMG00000025243) #33 DOCK8 (ENSPSMG00000025332) #34 ENSPSMG00000025574 #35 ENSPSMG00000025644 Mouse lemur MODERN SPECIES 1 ERMP1 (ENSMICG00000016329) #8 ENSMICG00000030745 RIC1 (ENSMICG00000016293) #9 PDCD1LG2 (ENSMICG00000004284) CD274 (ENSMICG00000035171) #12 PLGRKT (ENSMICG00000031798) #13 ENSMICG00000043730 ##14 INSL6 (ENSMICG00000044551) #14 JAK2 (ENSMICG00000003885) #15 RCL1 (ENSMICG00000015562) #16 ENSMICG00000013112 #17 CDC37L1 (ENSMICG00000017690) #18 SPATA6L (ENSMICG00000017688) SLC1A1 (ENSMICG00000005171) #21 ENSMICG00000031277 #22 ENSMICG00000041775 #22 RFX3 (ENSMICG00000011871) #23 ENSMICG00000029542 PUM3 (ENSMICG00000045916) #25 KCNV2 (ENSMICG00000005193) #26 VLDLR (ENSMICG00000005182) #28 ENSMICG00000005190 #27 SMARCA2 (ENSMICG00000005162) #29 DMRT2 (ENSMICG00000010426) #30 DMRT3 (ENSMICG00000044854) #31 DMRT1 (ENSMICG00000010417) #32 KANK1 (ENSMICG00000010410) #33 DOCK8 (ENSMICG00000008267) #34 ENSMICG00000031232 ENSMICG00000005330 ENSMICG00000036465 Bushbaby MODERN SPECIES 121 ENSOGAG00000030737 MLANA (ENSOGAG00000010986) ERMP1 (ENSOGAG00000012020) #8 RIC1 (ENSOGAG00000012009) #9 PDCD1LG2 (ENSOGAG00000003284) CD274 (ENSOGAG00000003282) #12 PLGRKT (ENSOGAG00000003280) #13 ENSOGAG00000009500 ##14 JAK2 (ENSOGAG00000012246) #15 RCL1 (ENSOGAG00000007480) #16 AK3 (ENSOGAG00000007477) #17 CDC37L1 (ENSOGAG00000007475) #18 SPATA6L (ENSOGAG00000007468) PLPP6 (ENSOGAG00000007472) #20 SLC1A1 (ENSOGAG00000007464) #21 GLIS3 (ENSOGAG00000007376) #22 RFX3 (ENSOGAG00000007762) #23 ENSOGAG00000008125 #25 KCNV2 (ENSOGAG00000030433) #26 VLDLR (ENSOGAG00000013312) #28 SMARCA2 (ENSOGAG00000017053) #29 ENSOGAG00000025218 DMRT2 (ENSOGAG00000001994) #30 DMRT3 (ENSOGAG00000026565) #31 DMRT1 (ENSOGAG00000001989) #32 KANK1 (ENSOGAG00000001985) #33 ENSOGAG00000031226 DOCK8 (ENSOGAG00000004639) #34 ENSOGAG00000002011 #35 ENSOGAG00000029277 PGM5 (ENSOGAG00000015121) #36 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000156896.r #22 Lemuriformes ANCESTRAL SPECIES ENSGT00940000156896.r #22 Mouse lemur MODERN SPECIES 1 MLANA (ENSMICG00000048054) ERMP1 (ENSMICG00000016329) #8 ENSMICG00000030745 RIC1 (ENSMICG00000016293) #9 PDCD1LG2 (ENSMICG00000004284) CD274 (ENSMICG00000035171) #12 PLGRKT (ENSMICG00000031798) #13 ENSMICG00000043730 ##14 INSL6 (ENSMICG00000044551) #14 JAK2 (ENSMICG00000003885) #15 RCL1 (ENSMICG00000015562) #16 ENSMICG00000013112 #17 CDC37L1 (ENSMICG00000017690) #18 SPATA6L (ENSMICG00000017688) SLC1A1 (ENSMICG00000005171) #21 ENSMICG00000031277 #22 ENSMICG00000041775 #22 RFX3 (ENSMICG00000011871) #23 ENSMICG00000029542 PUM3 (ENSMICG00000045916) #25 KCNV2 (ENSMICG00000005193) #26 VLDLR (ENSMICG00000005182) #28 ENSMICG00000005190 #27 SMARCA2 (ENSMICG00000005162) #29 DMRT2 (ENSMICG00000010426) #30 DMRT3 (ENSMICG00000044854) #31 DMRT1 (ENSMICG00000010417) #32 KANK1 (ENSMICG00000010410) #33 DOCK8 (ENSMICG00000008267) #34 ENSMICG00000031232 ENSMICG00000005330 Haplorrhini ANCESTRAL SPECIES 9 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Tarsier MODERN SPECIES 6909 GLIS3 (ENSTSYG00000000686) #22 Simiiformes ANCESTRAL SPECIES 11 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523 #35 ENSGT00940000163353 Platyrrhini ANCESTRAL SPECIES 8 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523.r #35 ENSGT00940000163353 Cebidae ANCESTRAL SPECIES 7 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00640000091523.r #35 ENSGT00940000163353 Marmoset MODERN SPECIES PDCD1LG2 (ENSCJAG00000048652) CD274 (ENSCJAG00000011388) #12 PLGRKT (ENSCJAG00000011374) #13 ENSCJAG00000038187 ##14 INSL6 (ENSCJAG00000011358) #14 ENSCJAG00000076577 JAK2 (ENSCJAG00000011228) #15 RCL1 (ENSCJAG00000011202) #16 ENSCJAG00000059464 CDC37L1 (ENSCJAG00000011155) #18 AK3 (ENSCJAG00000011188) #17 PLPP6 (ENSCJAG00000063898) #20 SPATA6L (ENSCJAG00000011136) SLC1A1 (ENSCJAG00000011113) #21 ENSCJAG00000073768 GLIS3 (ENSCJAG00000011083) #22 RFX3 (ENSCJAG00000010996) #23 PUM3 (ENSCJAG00000010917) #25 KCNV2 (ENSCJAG00000042809) #26 VLDLR (ENSCJAG00000010772) #28 ENSCJAG00000042690 #27 SMARCA2 (ENSCJAG00000010710) #29 DMRT2 (ENSCJAG00000010690) #30 DMRT3 (ENSCJAG00000063670) #31 ENSCJAG00000084547 KANK1 (ENSCJAG00000010595) #33 DOCK8 (ENSCJAG00000010485) #34 ENSCJAG00000078334 ENSCJAG00000054365 ENSCJAG00000010423 #35 ENSCJAG00000040149 Cebidae_a ANCESTRAL SPECIES 92 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00530000063402.a.h ENSGT00390000004049.ab ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 Capuchin MODERN SPECIES 227 INSL6 (ENSCCAG00000028704) #14 JAK2 (ENSCCAG00000022686) #15 RCL1 (ENSCCAG00000033505) #16 AK3 (ENSCCAG00000024553) #17 CDC37L1 (ENSCCAG00000036002) #18 PLPP6 (ENSCCAG00000017149) #20 SPATA6L (ENSCCAG00000019855) SLC1A1 (ENSCCAG00000024828) #21 GLIS3 (ENSCCAG00000025272) #22 RFX3 (ENSCCAG00000030352) #23 ENSCCAG00000032475 ENSCCAG00000034048 ENSCCAG00000023250 PUM3 (ENSCCAG00000032650) #25 KCNV2 (ENSCCAG00000006608) #26 VLDLR (ENSCCAG00000034631) #28 ENSCCAG00000024458 #27 ENSCCAG00000032291 SMARCA2 (ENSCCAG00000030636) #29 Bolivian squirrel monkey MODERN SPECIES 118 RCL1 (ENSSBOG00000026369) #16 ENSSBOG00000018606 AK3 (ENSSBOG00000002841) #17 CDC37L1 (ENSSBOG00000032737) #18 PLPP6 (ENSSBOG00000019035) #20 ENSSBOG00000022998 SPATA6L (ENSSBOG00000026985) SLC1A1 (ENSSBOG00000032684) #21 ENSSBOG00000019687 GLIS3 (ENSSBOG00000032997) #22 RFX3 (ENSSBOG00000031103) #23 ENSSBOG00000016907 ENSSBOG00000026932 ENSSBOG00000022458 PUM3 (ENSSBOG00000028066) #25 KCNV2 (ENSSBOG00000023504) #26 VLDLR (ENSSBOG00000031091) #28 ENSSBOG00000020747 SMARCA2 (ENSSBOG00000034827) #29 ENSSBOG00000019886 DMRT2 (ENSSBOG00000010665) #30 DMRT3 (ENSSBOG00000027585) #31 DMRT1 (ENSSBOG00000027694) #32 KANK1 (ENSSBOG00000032525) #33 DOCK8 (ENSSBOG00000020599) #34 Mas night monkey MODERN SPECIES 599 RIC1 (ENSANAG00000037454) #9 ENSANAG00000025398 PDCD1LG2 (ENSANAG00000020809) ENSANAG00000019149 CD274 (ENSANAG00000028618) #12 PLGRKT (ENSANAG00000022854) #13 ENSANAG00000023659 ##14 JAK2 (ENSANAG00000027034) #15 RCL1 (ENSANAG00000037372) #16 AK3 (ENSANAG00000037726) #17 CDC37L1 (ENSANAG00000028426) #18 ENSANAG00000029767 SPATA6L (ENSANAG00000030395) PLPP6 (ENSANAG00000019076) #20 SLC1A1 (ENSANAG00000032125) #21 GLIS3 (ENSANAG00000038022) #22 RFX3 (ENSANAG00000038145) #23 ENSANAG00000036903 PUM3 (ENSANAG00000024520) #25 KCNV2 (ENSANAG00000035114) #26 VLDLR (ENSANAG00000020851) #28 ENSANAG00000029407 #27 SMARCA2 (ENSANAG00000026498) #29 ENSANAG00000018592 DMRT2 (ENSANAG00000020591) #30 DMRT3 (ENSANAG00000027840) #31 DMRT1 (ENSANAG00000030765) #32 Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154434.a.a.f ##14 ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 Hominoidea ANCESTRAL SPECIES 23 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154434.a.a.f ##14 ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 Hominidae ANCESTRAL SPECIES 10 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154434.a.a.f ##14 ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154434.a.a.f ##14 ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 Homo/Pan group ANCESTRAL SPECIES 27 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154434.a.a.f ##14 ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 Pan ANCESTRAL SPECIES 26 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154434.a.a.f ##14 ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 Chimpanzee MODERN SPECIES 22 CD274 (ENSPTRG00000020755) #12 ENSPTRG00000046654 PLGRKT (ENSPTRG00000020753) #13 RLN1 (ENSPTRG00000050353) ##14 RLN2 (ENSPTRG00000045482) ##14 INSL4 (ENSPTRG00000020750) ##14 INSL6 (ENSPTRG00000020748) #14 ENSPTRG00000052532 JAK2 (ENSPTRG00000020744) #15 RCL1 (ENSPTRG00000020743) #16 AK3 (ENSPTRG00000020742) #17 CDC37L1 (ENSPTRG00000020741) #18 PLPP6 (ENSPTRG00000044921) #20 SPATA6L (ENSPTRG00000020740) SLC1A1 (ENSPTRG00000020739) #21 GLIS3 (ENSPTRG00000020738) #22 ENSPTRG00000050873 RFX3 (ENSPTRG00000048670) #23 ENSPTRG00000046907 PUM3 (ENSPTRG00000020735) #25 KCNV2 (ENSPTRG00000020734) #26 VLDLR (ENSPTRG00000020732) #28 ENSPTRG00000047815 #27 ENSPTRG00000052144 SMARCA2 (ENSPTRG00000051168) #29 DMRT2 (ENSPTRG00000020730) #30 DMRT3 (ENSPTRG00000020729) #31 DMRT1 (ENSPTRG00000020728) #32 KANK1 (ENSPTRG00000041819) #33 ENSPTRG00000044534 DOCK8 (ENSPTRG00000020725) #34 Bonobo MODERN SPECIES 22 RIC1 (ENSPPAG00000039773) #9 PDCD1LG2 (ENSPPAG00000030710) CD274 (ENSPPAG00000034663) #12 ENSPPAG00000031342 PLGRKT (ENSPPAG00000030588) #13 RLN1 (ENSPPAG00000029999) ##14 RLN2 (ENSPPAG00000025312) ##14 INSL6 (ENSPPAG00000002535) #14 ENSPPAG00000038776 JAK2 (ENSPPAG00000019000) #15 RCL1 (ENSPPAG00000037958) #16 AK3 (ENSPPAG00000033568) #17 CDC37L1 (ENSPPAG00000038614) #18 SPATA6L (ENSPPAG00000010175) SLC1A1 (ENSPPAG00000027502) #21 GLIS3 (ENSPPAG00000043097) #22 ENSPPAG00000011368 RFX3 (ENSPPAG00000039978) #23 ENSPPAG00000029157 PUM3 (ENSPPAG00000041337) #25 KCNV2 (ENSPPAG00000040791) #26 VLDLR (ENSPPAG00000029389) #28 ENSPPAG00000042393 #27 ENSPPAG00000042332 SMARCA2 (ENSPPAG00000038717) #29 DMRT2 (ENSPPAG00000033739) #30 ENSPPAG00000027768 #31 DMRT1 (ENSPPAG00000036830) #32 DOCK8 (ENSPPAG00000041152) #34 ENSPPAG00000035014 Human MODERN SPECIES 21 RIC1 (ENSG00000107036) #9 PDCD1LG2 (ENSG00000197646) CD274 (ENSG00000120217) #12 PLGRKT (ENSG00000107020) #13 RLN1 (ENSG00000107018) ##14 RLN2 (ENSG00000107014) ##14 INSL4 (ENSG00000120211) ##14 INSL6 (ENSG00000120210) #14 JAK2 (ENSG00000096968) #15 RCL1 (ENSG00000120158) #16 AK3 (ENSG00000147853) #17 CDC37L1 (ENSG00000106993) #18 PLPP6 (ENSG00000205808) #20 SPATA6L (ENSG00000106686) SLC1A1 (ENSG00000106688) #21 GLIS3 (ENSG00000107249) #22 RFX3 (ENSG00000080298) #23 PUM3 (ENSG00000080608) #25 KCNV2 (ENSG00000168263) #26 VLDLR (ENSG00000147852) #28 SMARCA2 (ENSG00000080503) #29 DMRT2 (ENSG00000173253) #30 DMRT3 (ENSG00000064218) #31 DMRT1 (ENSG00000137090) #32 KANK1 (ENSG00000107104) #33 DOCK8 (ENSG00000107099) #34 ZNG1A (ENSG00000172785) FOXD4 (ENSG00000170122) WASHC1 (ENSG00000181404) Gorilla MODERN SPECIES 22 PDCD1LG2 (ENSGGOG00000001681) CD274 (ENSGGOG00000008540) #12 PLGRKT (ENSGGOG00000004113) #13 RLN1 (ENSGGOG00000005891) ##14 RLN2 (ENSGGOG00000026430) ##14 INSL4 (ENSGGOG00000036799) ##14 INSL6 (ENSGGOG00000008771) #14 JAK2 (ENSGGOG00000007243) #15 ENSGGOG00000022573 RCL1 (ENSGGOG00000015041) #16 AK3 (ENSGGOG00000028122) #17 CDC37L1 (ENSGGOG00000006889) #18 SPATA6L (ENSGGOG00000034964) PLPP6 (ENSGGOG00000040149) #20 SLC1A1 (ENSGGOG00000000262) #21 GLIS3 (ENSGGOG00000038970) #22 RFX3 (ENSGGOG00000003805) #23 ENSGGOG00000022372 PUM3 (ENSGGOG00000006143) #25 KCNV2 (ENSGGOG00000000231) #26 VLDLR (ENSGGOG00000001362) #28 ENSGGOG00000038609 #27 SMARCA2 (ENSGGOG00000000513) #29 ENSGGOG00000039224 DMRT2 (ENSGGOG00000025101) #30 DMRT3 (ENSGGOG00000013303) #31 DMRT1 (ENSGGOG00000013298) #32 KANK1 (ENSGGOG00000005466) #33 DOCK8 (ENSGGOG00000008791) #34 ENSGGOG00000015757 ENSGGOG00000022867 #35 Orangutan MODERN SPECIES 22 RIC1 (ENSPPYG00000019235) #9 PDCD1LG2 (ENSPPYG00000019236) CD274 (ENSPPYG00000019237) #12 PLGRKT (ENSPPYG00000019238) #13 RLN1 (ENSPPYG00000019239) ##14 RLN2 (ENSPPYG00000040733) ##14 INSL4 (ENSPPYG00000019240) ##14 INSL6 (ENSPPYG00000019242) #14 JAK2 (ENSPPYG00000019243) #15 RCL1 (ENSPPYG00000019244) #16 AK3 (ENSPPYG00000019245) #17 CDC37L1 (ENSPPYG00000019246) #18 SPATA6L (ENSPPYG00000019247) PLPP6 (ENSPPYG00000019248) #20 SLC1A1 (ENSPPYG00000019249) #21 GLIS3 (ENSPPYG00000019250) #22 RFX3 (ENSPPYG00000019253) #23 ENSPPYG00000019254 PUM3 (ENSPPYG00000019255) #25 KCNV2 (ENSPPYG00000019256) #26 VLDLR (ENSPPYG00000019257) #28 ENSPPYG00000041078 #27 SMARCA2 (ENSPPYG00000019258) #29 DMRT2 (ENSPPYG00000035747) #30 DMRT3 (ENSPPYG00000019260) #31 DMRT1 (ENSPPYG00000019261) #32 KANK1 (ENSPPYG00000019262) #33 DOCK8 (ENSPPYG00000019264) #34 ENSPPYG00000030930 ZNG1A (ENSPPYG00000019265) #35 ENSPPYG00000041038 Gibbon DUPLICATION Gibbon MODERN SPECIES 10 CD274 (ENSNLEG00000009009) #12 ENSNLEG00000028615 PLGRKT (ENSNLEG00000008991) #13 RLN1 (ENSNLEG00000008986) ##14 RLN2 (ENSNLEG00000008980) ##14 INSL4 (ENSNLEG00000008978) ##14 INSL6 (ENSNLEG00000008974) #14 ENSNLEG00000027963 JAK2 (ENSNLEG00000008897) #15 RCL1 (ENSNLEG00000008891) #16 AK3 (ENSNLEG00000008885) #17 CDC37L1 (ENSNLEG00000008879) #18 ENSNLEG00000028049 #20 SPATA6L (ENSNLEG00000008860) SLC1A1 (ENSNLEG00000031411) #21 ENSNLEG00000035119 #22 ENSNLEG00000034817 #22 ENSNLEG00000028743 RFX3 (ENSNLEG00000008785) #23 ENSNLEG00000029981 PUM3 (ENSNLEG00000008712) #25 KCNV2 (ENSNLEG00000008701) #26 VLDLR (ENSNLEG00000008596) #28 ENSNLEG00000008695 #27 ENSNLEG00000029055 SMARCA2 (ENSNLEG00000008575) #29 DMRT2 (ENSNLEG00000008564) #30 DMRT3 (ENSNLEG00000008556) #31 DMRT1 (ENSNLEG00000008544) #32 ENSNLEG00000018709 KANK1 (ENSNLEG00000008510) #33 Gibbon MODERN SPECIES 10 ENSNLEG00000028615 PLGRKT (ENSNLEG00000008991) #13 RLN1 (ENSNLEG00000008986) ##14 RLN2 (ENSNLEG00000008980) ##14 INSL4 (ENSNLEG00000008978) ##14 INSL6 (ENSNLEG00000008974) #14 ENSNLEG00000027963 JAK2 (ENSNLEG00000008897) #15 RCL1 (ENSNLEG00000008891) #16 AK3 (ENSNLEG00000008885) #17 CDC37L1 (ENSNLEG00000008879) #18 ENSNLEG00000028049 #20 SPATA6L (ENSNLEG00000008860) SLC1A1 (ENSNLEG00000031411) #21 ENSNLEG00000035119 #22 ENSNLEG00000034817 #22 ENSNLEG00000028743 RFX3 (ENSNLEG00000008785) #23 ENSNLEG00000029981 PUM3 (ENSNLEG00000008712) #25 KCNV2 (ENSNLEG00000008701) #26 VLDLR (ENSNLEG00000008596) #28 ENSNLEG00000008695 #27 ENSNLEG00000029055 SMARCA2 (ENSNLEG00000008575) #29 DMRT2 (ENSNLEG00000008564) #30 DMRT3 (ENSNLEG00000008556) #31 DMRT1 (ENSNLEG00000008544) #32 ENSNLEG00000018709 KANK1 (ENSNLEG00000008510) #33 DOCK8 (ENSNLEG00000008451) #34 Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000160907 #20 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154318.B.i.b ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 Rhinopithecus ANCESTRAL SPECIES 547 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000160907 #20 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 Golden snub-nosed monkey MODERN SPECIES 768 RCL1 (ENSRROG00000029781) #16 AK3 (ENSRROG00000036255) #17 CDC37L1 (ENSRROG00000036422) #18 SPATA6L (ENSRROG00000029293) PLPP6 (ENSRROG00000013349) #20 SLC1A1 (ENSRROG00000032409) #21 GLIS3 (ENSRROG00000031282) #22 ENSRROG00000033006 RFX3 (ENSRROG00000033247) #23 Black snub-nosed monkey MODERN SPECIES 762 GLIS3 (ENSRBIG00000027715) #22 ENSRBIG00000042612 ENSRBIG00000038247 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154318.B.i.b ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154937.s.b ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT00940000159989.h ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154318.B.i.b ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154937.s.b ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT00940000159989.h ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154318.B.i.b ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 Cercopithecinae_d ANCESTRAL SPECIES 34 ENSGT00940000161430 #12 ENSGT00730000111317.d ENSGT00390000000375 #13 ENSGT00940000154937.s.b ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT00940000159989.h ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154318.B.i.b ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 Drill MODERN SPECIES 978 CD274 (ENSMLEG00000031295) #12 ENSMLEG00000042007 PLGRKT (ENSMLEG00000042174) #13 ENSMLEG00000035630 RLN2 (ENSMLEG00000039515) ##14 INSL4 (ENSMLEG00000034989) ##14 INSL6 (ENSMLEG00000042955) #14 ENSMLEG00000029968 JAK2 (ENSMLEG00000030814) #15 RCL1 (ENSMLEG00000043088) #16 AK3 (ENSMLEG00000032869) #17 CDC37L1 (ENSMLEG00000014590) #18 PLPP6 (ENSMLEG00000009133) #20 SPATA6L (ENSMLEG00000034746) SLC1A1 (ENSMLEG00000042172) #21 GLIS3 (ENSMLEG00000040353) #22 ENSMLEG00000000662 ENSMLEG00000038681 RFX3 (ENSMLEG00000033860) #23 ENSMLEG00000041919 PUM3 (ENSMLEG00000034820) #25 KCNV2 (ENSMLEG00000032357) #26 VLDLR (ENSMLEG00000032288) #28 ENSMLEG00000035182 #27 ENSMLEG00000041221 SMARCA2 (ENSMLEG00000027418) #29 Sooty mangabey MODERN SPECIES 629 PDCD1LG2 (ENSCATG00000017898) CD274 (ENSCATG00000044292) #12 PLGRKT (ENSCATG00000038359) #13 ENSCATG00000019138 ENSCATG00000039027 RLN2 (ENSCATG00000039089) ##14 INSL4 (ENSCATG00000040894) ##14 INSL6 (ENSCATG00000029369) #14 JAK2 (ENSCATG00000024457) #15 RCL1 (ENSCATG00000034721) #16 AK3 (ENSCATG00000044404) #17 CDC37L1 (ENSCATG00000041223) #18 SPATA6L (ENSCATG00000043815) PLPP6 (ENSCATG00000022355) #20 SLC1A1 (ENSCATG00000039114) #21 GLIS3 (ENSCATG00000038488) #22 ENSCATG00000030409 RFX3 (ENSCATG00000034639) #23 ENSCATG00000029808 ENSCATG00000034924 PUM3 (ENSCATG00000024880) #25 KCNV2 (ENSCATG00000037552) #26 VLDLR (ENSCATG00000033177) #28 ENSCATG00000014393 #27 ENSCATG00000034215 SMARCA2 (ENSCATG00000031470) #29 DMRT2 (ENSCATG00000032878) #30 DMRT3 (ENSCATG00000043509) #31 DMRT1 (ENSCATG00000043860) #32 KANK1 (ENSCATG00000042088) #33 DOCK8 (ENSCATG00000037251) #34 Olive baboon MODERN SPECIES 4 RIC1 (ENSPANG00000025173) #9 PDCD1LG2 (ENSPANG00000025172) CD274 (ENSPANG00000025169) #12 PLGRKT (ENSPANG00000025170) #13 ENSPANG00000023574 RLN2 (ENSPANG00000040000) ##14 INSL4 (ENSPANG00000051326) ##14 INSL6 (ENSPANG00000025144) #14 ENSPANG00000041678 JAK2 (ENSPANG00000025145) #15 RCL1 (ENSPANG00000025151) #16 AK3 (ENSPANG00000025152) #17 CDC37L1 (ENSPANG00000025153) #18 SPATA6L (ENSPANG00000025154) SLC1A1 (ENSPANG00000025156) #21 GLIS3 (ENSPANG00000025157) #22 ENSPANG00000046940 RFX3 (ENSPANG00000025143) #23 PUM3 (ENSPANG00000025118) #25 KCNV2 (ENSPANG00000025119) #26 VLDLR (ENSPANG00000025120) #28 ENSPANG00000042712 SMARCA2 (ENSPANG00000025121) #29 DMRT2 (ENSPANG00000025122) #30 DMRT3 (ENSPANG00000025123) #31 DMRT1 (ENSPANG00000025124) #32 KANK1 (ENSPANG00000025125) #33 DOCK8 (ENSPANG00000025117) #34 ENSPANG00000025116 #35 FOXD4L1 (ENSPANG00000009332) PGM5 (ENSPANG00000025114) #36 Macaca ANCESTRAL SPECIES 10 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154937.s.b ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000153498.B.a.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT00910000146957 ENSGT00940000159989.h ENSGT01050000244879.a.a.b #23 ENSGT00390000004049.cb ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154318.B.i.b ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 Macaca_a ANCESTRAL SPECIES 10 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00990000207287 ENSGT00940000154937.s.b ENSGT00940000154434.a.a.e ##14 ENSGT00940000154434.a.b ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000160907 #20 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00910000146995 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT01100000264112.b.a ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00410000028750 ENSGT00390000010770.r ENSGT00640000091523 #35 ENSGT00940000163353 Rhesus MODERN SPECIES 6 PDCD1LG2 (ENSMMUG00000017991) PLGRKT (ENSMMUG00000006197) #13 CD274 (ENSMMUG00000012235) #12 ENSMMUG00000060737 ENSMMUG00000057739 RLN2 (ENSMMUG00000047971) ##14 INSL4 (ENSMMUG00000058221) ##14 INSL6 (ENSMMUG00000065127) #14 JAK2 (ENSMMUG00000014558) #15 RCL1 (ENSMMUG00000057331) #16 AK3 (ENSMMUG00000000143) #17 CDC37L1 (ENSMMUG00000000141) #18 SPATA6L (ENSMMUG00000000136) PLPP6 (ENSMMUG00000059411) #20 SLC1A1 (ENSMMUG00000000135) #21 GLIS3 (ENSMMUG00000057568) #22 RFX3 (ENSMMUG00000000802) #23 PUM3 (ENSMMUG00000002362) #25 KCNV2 (ENSMMUG00000060949) #26 VLDLR (ENSMMUG00000015093) #28 SMARCA2 (ENSMMUG00000015279) #29 ENSMMUG00000051059 DMRT2 (ENSMMUG00000014844) #30 DMRT3 (ENSMMUG00000044083) #31 ENSMMUG00000061012 KANK1 (ENSMMUG00000019862) #33 ENSMMUG00000064601 DOCK8 (ENSMMUG00000016976) #34 ENSMMUG00000058086 ENSMMUG00000050562 ZNG1A (ENSMMUG00000016193) #35 Crab-eating macaque MODERN SPECIES 6 ENSMFAG00000048939 PLGRKT (ENSMFAG00000000751) #13 ENSMFAG00000062108 ENSMFAG00000038755 RLN2 (ENSMFAG00000060189) ##14 INSL4 (ENSMFAG00000050840) ##14 INSL6 (ENSMFAG00000027620) #14 ENSMFAG00000054197 JAK2 (ENSMFAG00000003627) #15 RCL1 (ENSMFAG00000037906) #16 ENSMFAG00000049440 AK3 (ENSMFAG00000041698) #17 CDC37L1 (ENSMFAG00000000879) #18 SPATA6L (ENSMFAG00000032285) SLC1A1 (ENSMFAG00000038163) #21 ENSMFAG00000030908 #22 ENSMFAG00000049557 RFX3 (ENSMFAG00000000237) #23 ENSMFAG00000049201 PUM3 (ENSMFAG00000001430) #25 KCNV2 (ENSMFAG00000055892) #26 VLDLR (ENSMFAG00000032374) #28 ENSMFAG00000048099 ENSMFAG00000003814 #29 ENSMFAG00000056188 ENSMFAG00000058821 #29 DMRT2 (ENSMFAG00000040812) #30 DMRT3 (ENSMFAG00000045391) #31 ENSMFAG00000060255 KANK1 (ENSMFAG00000036947) #33 ENSMFAG00000047680 Pig-tailed macaque MODERN SPECIES 182 CD274 (ENSMNEG00000044065) #12 PLGRKT (ENSMNEG00000035542) #13 ENSMNEG00000006679 ENSMNEG00000039597 RLN2 (ENSMNEG00000045554) ##14 INSL4 (ENSMNEG00000038309) ##14 INSL6 (ENSMNEG00000011366) #14 ENSMNEG00000032986 JAK2 (ENSMNEG00000031180) #15 RCL1 (ENSMNEG00000012288) #16 AK3 (ENSMNEG00000041876) #17 CDC37L1 (ENSMNEG00000030663) #18 PLPP6 (ENSMNEG00000001828) #20 SPATA6L (ENSMNEG00000044422) SLC1A1 (ENSMNEG00000029913) #21 GLIS3 (ENSMNEG00000032738) #22 ENSMNEG00000040313 ENSMNEG00000042708 RFX3 (ENSMNEG00000038188) #23 ENSMNEG00000032248 PUM3 (ENSMNEG00000035288) #25 KCNV2 (ENSMNEG00000012723) #26 VLDLR (ENSMNEG00000040863) #28 ENSMNEG00000044919 #27 ENSMNEG00000040152 ENSMNEG00000028744 SMARCA2 (ENSMNEG00000041069) #29 DMRT2 (ENSMNEG00000033851) #30 DMRT3 (ENSMNEG00000035240) #31 DMRT1 (ENSMNEG00000036006) #32 KANK1 (ENSMNEG00000029060) #33 Vervet Monkey MODERN SPECIES 3 ERMP1 (ENSCSAG00000008897) #8 RIC1 (ENSCSAG00000008890) #9 PDCD1LG2 (ENSCSAG00000008883) CD274 (ENSCSAG00000008879) #12 PLGRKT (ENSCSAG00000008877) #13 RLN2 (ENSCSAG00000008867) ##14 INSL4 (ENSCSAG00000008859) ##14 INSL6 (ENSCSAG00000008855) #14 JAK2 (ENSCSAG00000008828) #15 RCL1 (ENSCSAG00000008811) #16 AK3 (ENSCSAG00000008801) #17 CDC37L1 (ENSCSAG00000008790) #18 SPATA6L (ENSCSAG00000008768) PLPP6 (ENSCSAG00000018491) #20 SLC1A1 (ENSCSAG00000008723) #21 ENSCSAG00000008711 #22 RFX3 (ENSCSAG00000008704) #23 PUM3 (ENSCSAG00000008691) #25 KCNV2 (ENSCSAG00000008677) #26 VLDLR (ENSCSAG00000008671) #28 ENSCSAG00000008657 SMARCA2 (ENSCSAG00000008650) #29 DMRT2 (ENSCSAG00000008632) #30 DMRT3 (ENSCSAG00000008627) #31 DMRT1 (ENSCSAG00000008623) #32 KANK1 (ENSCSAG00000008611) #33 DOCK8 (ENSCSAG00000008591) #34 ENSCSAG00000018493 ENSCSAG00000008555 #35 FOXD4L1 (ENSCSAG00000018495) PGM5 (ENSCSAG00000008540) #36 Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Tree shrew MODERN SPECIES 198 ENSTBEG00000008004 #22 Glires ANCESTRAL SPECIES 9 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Lagomorpha ANCESTRAL SPECIES 68 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000183016.E.b.b ENSGT01050000244818 ENSGT00940000153064.b.d ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 Rabbit MODERN SPECIES ENSOCUG00000037426 ENSOCUG00000031086 INSL6 (ENSOCUG00000013682) #14 ENSOCUG00000037721 JAK2 (ENSOCUG00000016853) #15 RCL1 (ENSOCUG00000008161) #16 ENSOCUG00000013279 ENSOCUG00000011411 #17 CDC37L1 (ENSOCUG00000003468) #18 SPATA6L (ENSOCUG00000003455) PLPP6 (ENSOCUG00000003465) #20 ENSOCUG00000022202 #21 ENSOCUG00000026987 ENSOCUG00000013264 #21 ENSOCUG00000036407 GLIS3 (ENSOCUG00000023004) #22 ENSOCUG00000027590 ENSOCUG00000023393 RFX3 (ENSOCUG00000014086) #23 ENSOCUG00000039572 ENSOCUG00000004189 #25 KCNV2 (ENSOCUG00000004385) #26 VLDLR (ENSOCUG00000002231) #28 ENSOCUG00000022775 SMARCA2 (ENSOCUG00000006320) #29 ENSOCUG00000000241 ENSOCUG00000035677 ENSOCUG00000023438 ENSOCUG00000034834 ENSOCUG00000037388 DMRT2 (ENSOCUG00000003299) #30 Pika MODERN SPECIES 83 GLIS3 (ENSOPRG00000011679) #22 Rodentia ANCESTRAL SPECIES 9 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Rodentia_B ANCESTRAL SPECIES 6 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Myomorpha ANCESTRAL SPECIES 1 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Muroidea ANCESTRAL SPECIES 1 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Muroidea_A ANCESTRAL SPECIES ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Cricetidae ANCESTRAL SPECIES 1 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Cricetinae ANCESTRAL SPECIES 2 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Chinese hamster chok1gshd MODERN SPECIES 401 Ermp1 (ENSCGRG00001021468) #8 Ric1 (ENSCGRG00001016728) #9 Pdcd1lg2 (ENSCGRG00001015183) ENSCGRG00001013276 Cd274 (ENSCGRG00001024294) #12 Plgrkt (ENSCGRG00001023695) #13 Insl6 (ENSCGRG00001020673) #14 Jak2 (ENSCGRG00001015840) #15 Rcl1 (ENSCGRG00001013748) #16 AK3 (ENSCGRG00001007296) #17 Cdc37l1 (ENSCGRG00001000264) #18 Plpp6 (ENSCGRG00001012981) #20 Spata6l (ENSCGRG00001002881) ENSCGRG00001023585 Slc1a1 (ENSCGRG00001022336) #21 Glis3 (ENSCGRG00001014233) #22 Rfx3 (ENSCGRG00001021745) #23 Pum3 (ENSCGRG00001016402) #25 Kcnv2 (ENSCGRG00001018140) #26 ENSCGRG00001017895 #27 Vldlr (ENSCGRG00001014399) #28 Smarca2 (ENSCGRG00001002323) #29 Dmrt2 (ENSCGRG00001007562) #30 Dmrt3 (ENSCGRG00001005036) #31 Dmrt1 (ENSCGRG00001000625) #32 Kank1 (ENSCGRG00001020355) #33 Dock8 (ENSCGRG00001013079) #34 Cbwd1 (ENSCGRG00001020851) #35 Foxd4 (ENSCGRG00001006276) Pgm5 (ENSCGRG00001020037) #36 Tmem252 (ENSCGRG00001019081) #37 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00390000015476.d.b Prairie vole MODERN SPECIES 16 ENSMOCG00000019292 #8 Ric1 (ENSMOCG00000018339) #9 Pdcd1lg2 (ENSMOCG00000002927) Cd274 (ENSMOCG00000016738) #12 Plgrkt (ENSMOCG00000013870) #13 Rln1 (ENSMOCG00000012108) ##14 Insl6 (ENSMOCG00000015208) #14 Jak2 (ENSMOCG00000013580) #15 Rcl1 (ENSMOCG00000012145) #16 Ak3 (ENSMOCG00000010856) #17 Cdc37l1 (ENSMOCG00000018341) #18 Plpp6 (ENSMOCG00000001135) #20 Spata6l (ENSMOCG00000022082) ENSMOCG00000018225 Slc1a1 (ENSMOCG00000017507) #21 Glis3 (ENSMOCG00000009953) #22 Rfx3 (ENSMOCG00000018931) #23 ENSMOCG00000019519 #25 Kcnv2 (ENSMOCG00000014872) #26 Vldlr (ENSMOCG00000004269) #28 Smarca2 (ENSMOCG00000001611) #29 Dmrt2 (ENSMOCG00000016701) #30 Dmrt3 (ENSMOCG00000015270) #31 ENSMOCG00000017971 #32 Kank1 (ENSMOCG00000020725) #33 Dock8 (ENSMOCG00000014249) #34 Cbwd1 (ENSMOCG00000015974) #35 Pgm5 (ENSMOCG00000011710) #36 Tmem252 (ENSMOCG00000017938) #37 Fam122a (ENSMOCG00000001051) ENSMOCG00000010285 Northern American deer mouse MODERN SPECIES Ric1 (ENSPEMG00000022073) #9 Pdcd1lg2 (ENSPEMG00000021972) Cd274 (ENSPEMG00000022427) #12 Plgrkt (ENSPEMG00000022507) #13 Rln1 (ENSPEMG00000022594) ##14 ENSPEMG00000023396 #14 Jak2 (ENSPEMG00000022083) #15 Rcl1 (ENSPEMG00000023275) #16 Ak3 (ENSPEMG00000022781) #17 Cdc37l1 (ENSPEMG00000000344) #18 Plpp6 (ENSPEMG00000007181) #20 Spata6l (ENSPEMG00000023122) ENSPEMG00000021571 Slc1a1 (ENSPEMG00000009611) #21 ENSPEMG00000004286 Glis3 (ENSPEMG00000020002) #22 Rfx3 (ENSPEMG00000019731) #23 ENSPEMG00000019340 #25 ENSPEMG00000030423 Kcnv2 (ENSPEMG00000020138) #26 Vldlr (ENSPEMG00000022250) #28 ENSPEMG00000021666 #27 Smarca2 (ENSPEMG00000019821) #29 Dmrt2 (ENSPEMG00000019767) #30 Dmrt3 (ENSPEMG00000019990) #31 Dmrt1 (ENSPEMG00000019943) #32 Kank1 (ENSPEMG00000013916) #33 Dock8 (ENSPEMG00000014001) #34 Cbwd1 (ENSPEMG00000000396) #35 Pgm5 (ENSPEMG00000020205) #36 Tmem252 (ENSPEMG00000007137) #37 Murinae ANCESTRAL SPECIES ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Mus ANCESTRAL SPECIES ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00520000061590 #27 ENSGT00940000155460 #28 ENSGT00900000143396 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Mus_A ANCESTRAL SPECIES 16 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00520000061590 #27 ENSGT00940000155460 #28 ENSGT00900000143396 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Mus_B ANCESTRAL SPECIES 16 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00520000061590 #27 ENSGT00940000155460 #28 ENSGT00900000143396 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 Mouse MODERN SPECIES 10 Mlana (ENSMUSG00000024806) Ermp1 (ENSMUSG00000046324) #8 Ric1 (ENSMUSG00000038658) #9 Pdcd1lg2 (ENSMUSG00000016498) Cd274 (ENSMUSG00000016496) #12 Plgrkt (ENSMUSG00000016495) #13 Rln1 (ENSMUSG00000039097) ##14 Insl6 (ENSMUSG00000050957) #14 Jak2 (ENSMUSG00000024789) #15 Rcl1 (ENSMUSG00000024785) #16 Ak3 (ENSMUSG00000024782) #17 Cdc37l1 (ENSMUSG00000024780) #18 Plpp6 (ENSMUSG00000040105) #20 Spata6l (ENSMUSG00000064202) Slc1a1 (ENSMUSG00000024935) #21 Glis3 (ENSMUSG00000052942) #22 Rfx3 (ENSMUSG00000040929) #23 Pum3 (ENSMUSG00000041360) #25 Kcnv2 (ENSMUSG00000047298) #26 Vldlr (ENSMUSG00000024924) #28 Gm815 (ENSMUSG00000074913) Smarca2 (ENSMUSG00000024921) #29 Dmrt2 (ENSMUSG00000048138) #30 Dmrt3 (ENSMUSG00000042372) #31 Dmrt1 (ENSMUSG00000024837) #32 Kank1 (ENSMUSG00000032702) #33 Dock8 (ENSMUSG00000052085) #34 Cbwd1 (ENSMUSG00000024878) #35 Foxd4 (ENSMUSG00000051490) Gm10053 (ENSMUSG00000058927) Pgm5 (ENSMUSG00000041731) #36 Mus_C ANCESTRAL SPECIES 24 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00520000061590 #27 ENSGT00940000155460 #28 ENSGT00900000143396 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 spretus MODERN SPECIES 10 Mlana (MGP_SPRETEiJ_G0023780) Ermp1 (MGP_SPRETEiJ_G0023779) #8 Ric1 (MGP_SPRETEiJ_G0023778) #9 Pdcd1lg2 (MGP_SPRETEiJ_G0023777) Cd274 (MGP_SPRETEiJ_G0023776) #12 Plgrkt (MGP_SPRETEiJ_G0023775) #13 Rln1 (MGP_SPRETEiJ_G0023774) ##14 Insl6 (MGP_SPRETEiJ_G0023773) #14 Jak2 (MGP_SPRETEiJ_G0023772) #15 Rcl1 (MGP_SPRETEiJ_G0023771) #16 Ak3 (MGP_SPRETEiJ_G0023770) #17 Cdc37l1 (MGP_SPRETEiJ_G0023769) #18 Plpp6 (MGP_SPRETEiJ_G0023768) #20 Spata6l (MGP_SPRETEiJ_G0023767) Slc1a1 (MGP_SPRETEiJ_G0023766) #21 Glis3 (MGP_SPRETEiJ_G0023765) #22 Rfx3 (MGP_SPRETEiJ_G0023764) #23 Pum3 (MGP_SPRETEiJ_G0023763) #25 Kcnv2 (MGP_SPRETEiJ_G0023762) #26 Vldlr (MGP_SPRETEiJ_G0023761) #28 MGP_SPRETEiJ_G0023760 Smarca2 (MGP_SPRETEiJ_G0023759) #29 Dmrt2 (MGP_SPRETEiJ_G0023758) #30 Dmrt3 (MGP_SPRETEiJ_G0023757) #31 Kank1 (MGP_SPRETEiJ_G0023756) #33 Dock8 (MGP_SPRETEiJ_G0023755) #34 Cbwd1 (MGP_SPRETEiJ_G0023754) #35 Foxd4 (MGP_SPRETEiJ_G0023753) Pgm5 (MGP_SPRETEiJ_G0023752) #36 Tmem252 (MGP_SPRETEiJ_G0023751) #37 Fam122a (MGP_SPRETEiJ_G0023750) Steppe mouse MODERN SPECIES 3106 Glis3 (ENSMSIG00000023382) #22 ENSMSIG00000023373 Rfx3 (ENSMSIG00000023245) #23 Pum3 (ENSMSIG00000023194) #25 Kcnv2 (ENSMSIG00000023184) #26 ENSMSIG00000023160 #27 Vldlr (ENSMSIG00000023084) #28 Gm815 (ENSMSIG00000023064) Smarca2 (ENSMSIG00000022131) #29 Ryukyu mouse MODERN SPECIES 10 Mlana (MGP_CAROLIEiJ_G0022862) Ermp1 (MGP_CAROLIEiJ_G0022861) #8 Ric1 (MGP_CAROLIEiJ_G0022860) #9 Pdcd1lg2 (MGP_CAROLIEiJ_G0022859) Cd274 (MGP_CAROLIEiJ_G0022858) #12 Plgrkt (MGP_CAROLIEiJ_G0022857) #13 Rln1 (MGP_CAROLIEiJ_G0022856) ##14 Insl6 (MGP_CAROLIEiJ_G0022855) #14 Jak2 (MGP_CAROLIEiJ_G0022854) #15 Rcl1 (MGP_CAROLIEiJ_G0022853) #16 Ak3 (MGP_CAROLIEiJ_G0022852) #17 Cdc37l1 (MGP_CAROLIEiJ_G0022851) #18 Plpp6 (MGP_CAROLIEiJ_G0022850) #20 Spata6l (MGP_CAROLIEiJ_G0022849) Slc1a1 (MGP_CAROLIEiJ_G0022848) #21 Glis3 (MGP_CAROLIEiJ_G0022847) #22 Rfx3 (MGP_CAROLIEiJ_G0022846) #23 Pum3 (MGP_CAROLIEiJ_G0022845) #25 Kcnv2 (MGP_CAROLIEiJ_G0022844) #26 Vldlr (MGP_CAROLIEiJ_G0022843) #28 MGP_CAROLIEiJ_G0022842 Smarca2 (MGP_CAROLIEiJ_G0022841) #29 Dmrt2 (MGP_CAROLIEiJ_G0022840) #30 Dmrt3 (MGP_CAROLIEiJ_G0022839) #31 Dmrt1 (MGP_CAROLIEiJ_G0022838) #32 Kank1 (MGP_CAROLIEiJ_G0022837) #33 Dock8 (MGP_CAROLIEiJ_G0022836) #34 Cbwd1 (MGP_CAROLIEiJ_G0022835) #35 Foxd4 (MGP_CAROLIEiJ_G0022834) Pgm5 (MGP_CAROLIEiJ_G0022833) #36 Tmem252 (MGP_CAROLIEiJ_G0022832) #37 Shrew mouse MODERN SPECIES Mlana (MGP_PahariEiJ_G0014355) Ermp1 (MGP_PahariEiJ_G0014354) #8 Ric1 (MGP_PahariEiJ_G0014353) #9 Pdcd1lg2 (MGP_PahariEiJ_G0014352) Cd274 (MGP_PahariEiJ_G0014351) #12 MGP_PahariEiJ_G0014350 Rln1 (MGP_PahariEiJ_G0014349) ##14 Insl6 (MGP_PahariEiJ_G0014348) #14 Jak2 (MGP_PahariEiJ_G0014347) #15 Rcl1 (MGP_PahariEiJ_G0014346) #16 Ak3 (MGP_PahariEiJ_G0014345) #17 Cdc37l1 (MGP_PahariEiJ_G0014344) #18 Plpp6 (MGP_PahariEiJ_G0014343) #20 Spata6l (MGP_PahariEiJ_G0014342) Slc1a1 (MGP_PahariEiJ_G0014341) #21 Glis3 (MGP_PahariEiJ_G0014340) #22 Rfx3 (MGP_PahariEiJ_G0014339) #23 Pum3 (MGP_PahariEiJ_G0014338) #25 Kcnv2 (MGP_PahariEiJ_G0014337) #26 Vldlr (MGP_PahariEiJ_G0014336) #28 MGP_PahariEiJ_G0014335 Smarca2 (MGP_PahariEiJ_G0014334) #29 Dmrt2 (MGP_PahariEiJ_G0014333) #30 Dmrt3 (MGP_PahariEiJ_G0014332) #31 Dmrt1 (MGP_PahariEiJ_G0014331) #32 Kank1 (MGP_PahariEiJ_G0014330) #33 Dock8 (MGP_PahariEiJ_G0014329) #34 Cbwd1 (MGP_PahariEiJ_G0014328) #35 Foxd4 (MGP_PahariEiJ_G0014327) Pgm5 (MGP_PahariEiJ_G0014326) #36 Tmem252 (MGP_PahariEiJ_G0014325) #37 Rat MODERN SPECIES Ric1 (ENSRNOG00000016172) #9 Pdcd1lg2 (ENSRNOG00000016136) Cd274 (ENSRNOG00000016112) #12 Plgrkt (ENSRNOG00000015932) #13 Rln1 (ENSRNOG00000060867) ##14 Insl6 (ENSRNOG00000015868) #14 Jak2 (ENSRNOG00000059968) #15 Rcl1 (ENSRNOG00000015491) #16 Ak3 (ENSRNOG00000052506) #17 Cdc37l1 (ENSRNOG00000010967) #18 RGD1565057 (ENSRNOG00000069618) Plpp6 (ENSRNOG00000015268) #20 Spata6l (ENSRNOG00000015137) ENSRNOG00000065811 Slc1a1 (ENSRNOG00000014816) #21 Glis3 (ENSRNOG00000014768) #22 ENSRNOG00000066761 Rfx3 (ENSRNOG00000014486) #23 Pum3 (ENSRNOG00000012574) #25 Kcnv2 (ENSRNOG00000012566) #26 ENSRNOG00000062591 Vldlr (ENSRNOG00000027491) #28 ENSRNOG00000069446 #27 Smarca2 (ENSRNOG00000011931) #29 ENSRNOG00000062555 Dmrt2 (ENSRNOG00000016301) #30 Dmrt3 (ENSRNOG00000016284) #31 Dmrt1 (ENSRNOG00000016075) #32 Kank1 (ENSRNOG00000016023) #33 Hmgb1-ps4 (ENSRNOG00000065098) Dock8 (ENSRNOG00000015894) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 1166 Jak2 (ENSNGAG00000000096) #15 Rcl1 (ENSNGAG00000015327) #16 Ak3 (ENSNGAG00000016647) #17 Cdc37l1 (ENSNGAG00000018155) #18 Spata6l (ENSNGAG00000017948) Plpp6 (ENSNGAG00000014756) #20 Slc1a1 (ENSNGAG00000014723) #21 ENSNGAG00000018137 Glis3 (ENSNGAG00000006111) #22 Rfx3 (ENSNGAG00000016470) #23 Pum3 (ENSNGAG00000019468) #25 Kcnv2 (ENSNGAG00000020439) #26 Vldlr (ENSNGAG00000003966) #28 ENSNGAG00000012912 Smarca2 (ENSNGAG00000000108) #29 ENSNGAG00000013866 Dmrt2 (ENSNGAG00000020041) #30 Dmrt3 (ENSNGAG00000020423) #31 Dmrt1 (ENSNGAG00000001295) #32 Lesser Egyptian jerboa MODERN SPECIES 50 Ranbp6 (ENSJJAG00000010492) 9930021J03Rik (ENSJJAG00000016877) Mlana (ENSJJAG00000022272) Ermp1 (ENSJJAG00000021848) #8 Ric1 (ENSJJAG00000014841) #9 Plgrkt (ENSJJAG00000010846) #13 Rln1 (ENSJJAG00000013838) ##14 Jak2 (ENSJJAG00000012271) #15 ENSJJAG00000022803 #16 Ak3 (ENSJJAG00000023388) #17 Cdc37l1 (ENSJJAG00000024330) #18 Plpp6 (ENSJJAG00000011277) #20 Spata6l (ENSJJAG00000022941) ENSJJAG00000020462 Slc1a1 (ENSJJAG00000018507) #21 Glis3 (ENSJJAG00000011399) #22 ENSJJAG00000024335 Rfx3 (ENSJJAG00000010280) #23 ENSJJAG00000010263 Pum3 (ENSJJAG00000012563) #25 Kcnv2 (ENSJJAG00000016782) #26 ENSJJAG00000000409 #27 Vldlr (ENSJJAG00000016440) #28 Smarca2 (ENSJJAG00000010867) #29 ENSJJAG00000010719 Dmrt2 (ENSJJAG00000023959) #30 Dmrt3 (ENSJJAG00000022573) #31 Dmrt1 (ENSJJAG00000016690) #32 Kank1 (ENSJJAG00000018774) #33 ENSJJAG00000015498 #34 ENSJJAG00000017231 #34 Kangaroo rat MODERN SPECIES 359 ENSDORG00000028062 ENSDORG00000000109 #13 Jak2 (ENSDORG00000011552) #15 Rcl1 (ENSDORG00000015645) #16 Ak3 (ENSDORG00000010355) #17 Cdc37l1 (ENSDORG00000023648) #18 Plpp6 (ENSDORG00000003071) #20 Slc1a1 (ENSDORG00000010091) #21 ENSDORG00000025494 #22 Rfx3 (ENSDORG00000013906) #23 ENSDORG00000003628 #25 Kcnv2 (ENSDORG00000011511) #26 Vldlr (ENSDORG00000012954) #28 Smarca2 (ENSDORG00000014832) #29 Dmrt2 (ENSDORG00000007216) #30 ENSDORG00000006363 #32 Kank1 (ENSDORG00000015159) #33 Dock8 (ENSDORG00000007203) #34 Cbwd1 (ENSDORG00000004917) #35 Pgm5 (ENSDORG00000005476) #36 Tmem252 (ENSDORG00000005477) #37 Fam122a (ENSDORG00000001152) Pip5k1b (ENSDORG00000001153) Fxn (ENSDORG00000027975) Rodentia_A ANCESTRAL SPECIES 11 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Sciuridae ANCESTRAL SPECIES 6 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Marmotini ANCESTRAL SPECIES 1 ENSGT00530000063839.k #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Marmotini_b ANCESTRAL SPECIES 88 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Squirrel MODERN SPECIES 103 ENSSTOG00000016298 #14 JAK2 (ENSSTOG00000006679) #15 RCL1 (ENSSTOG00000000023) #16 AK3 (ENSSTOG00000000021) #17 CDC37L1 (ENSSTOG00000000020) #18 SPATA6L (ENSSTOG00000000018) PLPP6 (ENSSTOG00000025831) #20 SLC1A1 (ENSSTOG00000023583) #21 ENSSTOG00000031708 GLIS3 (ENSSTOG00000000302) #22 RFX3 (ENSSTOG00000006974) #23 PUM3 (ENSSTOG00000009586) #25 KCNV2 (ENSSTOG00000020003) #26 VLDLR (ENSSTOG00000006880) #28 ENSSTOG00000031987 #27 SMARCA2 (ENSSTOG00000006812) #29 DMRT2 (ENSSTOG00000026909) #30 DMRT3 (ENSSTOG00000023574) #31 DMRT1 (ENSSTOG00000010235) #32 KANK1 (ENSSTOG00000010218) #33 ENSSTOG00000030036 DOCK8 (ENSSTOG00000016411) #34 ENSSTOG00000031824 ENSSTOG00000028764 #35 ENSSTOG00000029964 Alpin marmot MODERN SPECIES 32 CD274 (ENSMMMG00000002100) #12 PLGRKT (ENSMMMG00000002117) #13 ENSMMMG00000002130 ##14 ENSMMMG00000002146 ENSMMMG00000002157 ENSMMMG00000002165 #14 JAK2 (ENSMMMG00000002174) #15 RCL1 (ENSMMMG00000002259) #16 AK3 (ENSMMMG00000002286) #17 CDC37L1 (ENSMMMG00000002322) #18 PLPP6 (ENSMMMG00000002356) #20 SPATA6L (ENSMMMG00000002361) SLC1A1 (ENSMMMG00000002380) #21 ENSMMMG00000002405 ENSMMMG00000002416 GLIS3 (ENSMMMG00000002430) #22 ENSMMMG00000002504 PUM3 (ENSMMMG00000002513) #25 KCNV2 (ENSMMMG00000002550) #26 ENSMMMG00000002572 VLDLR (ENSMMMG00000002594) #28 ENSMMMG00000002765 #27 ENSMMMG00000002785 SMARCA2 (ENSMMMG00000002811) #29 ENSMMMG00000003212 DMRT2 (ENSMMMG00000003238) #30 DMRT3 (ENSMMMG00000003239) #31 DMRT1 (ENSMMMG00000003270) #32 KANK1 (ENSMMMG00000003281) #33 ENSMMMG00000003301 ENSMMMG00000003304 Eurasian red squirrel MODERN SPECIES 6 MLANA (ENSSVLG00005025137) ERMP1 (ENSSVLG00005025117) #8 RIC1 (ENSSVLG00005025040) #9 PDCD1LG2 (ENSSVLG00005024955) CD274 (ENSSVLG00005024930) #12 PLGRKT (ENSSVLG00005024908) #13 ENSSVLG00005024871 INSL6 (ENSSVLG00005024849) #14 JAK2 (ENSSVLG00005024808) #15 RCL1 (ENSSVLG00005024752) #16 ENSSVLG00005024721 #17 CDC37L1 (ENSSVLG00005024699) #18 PLPP6 (ENSSVLG00005024689) #20 SPATA6L (ENSSVLG00005024615) SLC1A1 (ENSSVLG00005024569) #21 GLIS3 (ENSSVLG00005024543) #22 RFX3 (ENSSVLG00005024420) #23 ENSSVLG00005024401 PUM3 (ENSSVLG00005024338) #25 KCNV2 (ENSSVLG00005024318) #26 VLDLR (ENSSVLG00005024232) #28 ENSSVLG00005024201 #27 SMARCA2 (ENSSVLG00005024009) #29 DMRT2 (ENSSVLG00005023918) #30 DMRT3 (ENSSVLG00005023888) #31 DMRT1 (ENSSVLG00005023845) #32 KANK1 (ENSSVLG00005023807) #33 DOCK8 (ENSSVLG00005023344) #34 ENSSVLG00005023280 ENSSVLG00005023230 #35 ENSSVLG00005023212 Hystricomorpha ANCESTRAL SPECIES 46 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a.c.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Hystricomorpha_a ANCESTRAL SPECIES 53 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a.c.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b.d #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Hystricomorpha_b ANCESTRAL SPECIES 71 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a.c.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00900000143153 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00520000061590 #27 ENSGT00940000154821.b.d #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489.n #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Long-tailed chinchilla MODERN SPECIES 141 ERMP1 (ENSCLAG00000004784) #8 RIC1 (ENSCLAG00000008085) #9 ENSCLAG00000007197 CD274 (ENSCLAG00000006370) #12 PLGRKT (ENSCLAG00000008570) #13 INSL6 (ENSCLAG00000007423) #14 JAK2 (ENSCLAG00000005091) #15 RCL1 (ENSCLAG00000007445) #16 AK3 (ENSCLAG00000006329) #17 CDC37L1 (ENSCLAG00000005805) #18 PLPP6 (ENSCLAG00000017735) #20 SPATA6L (ENSCLAG00000010497) ENSCLAG00000009476 SLC1A1 (ENSCLAG00000009832) #21 ENSCLAG00000009238 GLIS3 (ENSCLAG00000008116) #22 RFX3 (ENSCLAG00000009044) #23 PUM3 (ENSCLAG00000011892) #25 KCNV2 (ENSCLAG00000013226) #26 VLDLR (ENSCLAG00000007543) #28 SMARCA2 (ENSCLAG00000014484) #29 DMRT2 (ENSCLAG00000006168) #30 DMRT3 (ENSCLAG00000015537) #31 DMRT1 (ENSCLAG00000015238) #32 KANK1 (ENSCLAG00000015509) #33 DOCK8 (ENSCLAG00000005204) #34 ENSCLAG00000005076 #35 ENSCLAG00000006762 PGM5 (ENSCLAG00000005854) #36 TMEM252 (ENSCLAG00000005523) #37 PIP5K1B (ENSCLAG00000011292) Degu MODERN SPECIES 128 MLANA (ENSODEG00000005368) ERMP1 (ENSODEG00000005254) #8 RIC1 (ENSODEG00000004340) #9 CD274 (ENSODEG00000004298) #12 PLGRKT (ENSODEG00000004267) #13 INSL6 (ENSODEG00000004231) #14 ENSODEG00000004220 JAK2 (ENSODEG00000004208) #15 RCL1 (ENSODEG00000004151) #16 ENSODEG00000004121 #17 CDC37L1 (ENSODEG00000004185) #18 PLPP6 (ENSODEG00000019026) #20 SPATA6L (ENSODEG00000004066) ENSODEG00000003949 SLC1A1 (ENSODEG00000003884) #21 GLIS3 (ENSODEG00000003731) #22 RFX3 (ENSODEG00000003682) #23 ENSODEG00000003625 #25 KCNV2 (ENSODEG00000003536) #26 ENSODEG00000003492 #28 ENSODEG00000006378 #27 SMARCA2 (ENSODEG00000005452) #29 DMRT2 (ENSODEG00000004992) #30 DMRT3 (ENSODEG00000004984) #31 DMRT1 (ENSODEG00000004898) #32 KANK1 (ENSODEG00000004766) #33 ENSODEG00000004719 ENSODEG00000004711 #34 ENSODEG00000004602 #34 ENSODEG00000004467 #34 ENSODEG00000003983 #35 Guinea pig MODERN SPECIES 21 MLANA (ENSCPOG00000013436) ERMP1 (ENSCPOG00000013432) #8 RIC1 (ENSCPOG00000013425) #9 CD274 (ENSCPOG00000004371) #12 PLGRKT (ENSCPOG00000012720) #13 ENSCPOG00000001365 ##14 INSL6 (ENSCPOG00000002694) #14 JAK2 (ENSCPOG00000014653) #15 RCL1 (ENSCPOG00000015354) #16 AK3 (ENSCPOG00000011927) #17 CDC37L1 (ENSCPOG00000030938) #18 SPATA6L (ENSCPOG00000012925) PLPP6 (ENSCPOG00000012931) #20 SLC1A1 (ENSCPOG00000011151) #21 ENSCPOG00000030794 GLIS3 (ENSCPOG00000005523) #22 RFX3 (ENSCPOG00000000900) #23 ENSCPOG00000008552 #25 KCNV2 (ENSCPOG00000032893) #26 VLDLR (ENSCPOG00000007685) #28 SMARCA2 (ENSCPOG00000005475) #29 DMRT2 (ENSCPOG00000008452) #30 DMRT3 (ENSCPOG00000005912) #31 DMRT1 (ENSCPOG00000005909) #32 KANK1 (ENSCPOG00000008389) #33 DOCK8 (ENSCPOG00000008366) #34 ENSCPOG00000019718 #35 PGM5 (ENSCPOG00000015031) #36 TMEM252 (ENSCPOG00000013771) #37 PABIR1 (ENSCPOG00000003280) PIP5K1B (ENSCPOG00000004288) Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000034164 ERMP1 (ENSHGLG00000018719) #8 RIC1 (ENSHGLG00000011155) #9 CD274 (ENSHGLG00000016786) #12 PLGRKT (ENSHGLG00000037089) #13 ENSHGLG00000019539 ##14 JAK2 (ENSHGLG00000011890) #15 ENSHGLG00000016452 #16 ENSHGLG00000018975 #17 CDC37L1 (ENSHGLG00000012329) #18 SPATA6L (ENSHGLG00000018477) PLPP6 (ENSHGLG00000038858) #20 SLC1A1 (ENSHGLG00000015155) #21 ENSHGLG00000017534 ENSHGLG00000032696 ENSHGLG00000015091 #22 ENSHGLG00000018913 #23 ENSHGLG00000019207 ENSHGLG00000042585 ENSHGLG00000016314 ENSHGLG00000015868 #25 KCNV2 (ENSHGLG00000015810) #26 VLDLR (ENSHGLG00000016113) #28 ENSHGLG00000016566 ENSHGLG00000035043 ENSHGLG00000005215 #29 ENSHGLG00000013697 ENSHGLG00000035319 ENSHGLG00000036415 ENSHGLG00000033430 #30 DMRT3 (ENSHGLG00000012858) #31 Atlantogenata ANCESTRAL SPECIES 68 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000163353 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00390000015476.d.b Xenarthra ANCESTRAL SPECIES 76 ENSGT00390000011483 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434.a ##14 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 Armadillo DUPLICATION Armadillo MODERN SPECIES 1454 ENSDNOG00000034768 ENSDNOG00000036232 PDCD1LG2 (ENSDNOG00000031933) CD274 (ENSDNOG00000018655) #12 ENSDNOG00000042926 #13 ENSDNOG00000036090 ##14 ENSDNOG00000001668 #14 JAK2 (ENSDNOG00000008173) #15 RCL1 (ENSDNOG00000019911) #16 AK3 (ENSDNOG00000038787) #17 CDC37L1 (ENSDNOG00000015975) #18 PLPP6 (ENSDNOG00000015974) #20 SPATA6L (ENSDNOG00000038916) SLC1A1 (ENSDNOG00000001798) #21 ENSDNOG00000042157 ENSDNOG00000035748 #22 ENSDNOG00000042655 ENSDNOG00000012636 #22 RFX3 (ENSDNOG00000018668) #23 PUM3 (ENSDNOG00000008157) #25 KCNV2 (ENSDNOG00000041737) #26 VLDLR (ENSDNOG00000001086) #28 SMARCA2 (ENSDNOG00000006402) #29 ENSDNOG00000040306 ST8SIA4 (ENSDNOG00000046147) Armadillo MODERN SPECIES 1454 PDCD1LG2 (ENSDNOG00000031933) CD274 (ENSDNOG00000018655) #12 ENSDNOG00000042926 #13 ENSDNOG00000036090 ##14 ENSDNOG00000001668 #14 JAK2 (ENSDNOG00000008173) #15 RCL1 (ENSDNOG00000019911) #16 AK3 (ENSDNOG00000038787) #17 CDC37L1 (ENSDNOG00000015975) #18 PLPP6 (ENSDNOG00000015974) #20 SPATA6L (ENSDNOG00000038916) SLC1A1 (ENSDNOG00000001798) #21 ENSDNOG00000042157 ENSDNOG00000035748 #22 ENSDNOG00000042655 ENSDNOG00000012636 #22 RFX3 (ENSDNOG00000018668) #23 PUM3 (ENSDNOG00000008157) #25 KCNV2 (ENSDNOG00000041737) #26 VLDLR (ENSDNOG00000001086) #28 SMARCA2 (ENSDNOG00000006402) #29 ENSDNOG00000040306 ST8SIA4 (ENSDNOG00000046147) Sloth MODERN SPECIES 815 GLIS3 (ENSCHOG00000011466) #22 Afrotheria DUPLICATION Afrotheria ANCESTRAL SPECIES 145 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896.m #22 ENSGT00940000156896.n #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00390000015476.d.b Afrotheria_a ANCESTRAL SPECIES 145 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896.m #22 ENSGT00940000156896.n #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00390000015476.d.b Elephant MODERN SPECIES 593 STKLD1 (ENSLAFG00000008238) ENSLAFG00000016963 ENSLAFG00000006436 MED22 (ENSLAFG00000002513) SURF6 (ENSLAFG00000026419) ABO (ENSLAFG00000010293) INSL6 (ENSLAFG00000007479) #14 JAK2 (ENSLAFG00000007471) #15 RCL1 (ENSLAFG00000017495) #16 AK3 (ENSLAFG00000001126) #17 CDC37L1 (ENSLAFG00000001125) #18 SPATA6L (ENSLAFG00000001121) PLPP6 (ENSLAFG00000001123) #20 SLC1A1 (ENSLAFG00000001120) #21 ENSLAFG00000026125 ENSLAFG00000029971 #22 ENSLAFG00000031654 #22 RFX3 (ENSLAFG00000021602) #23 PUM3 (ENSLAFG00000017341) #25 KCNV2 (ENSLAFG00000017292) #26 VLDLR (ENSLAFG00000015211) #28 SMARCA2 (ENSLAFG00000014061) #29 DMRT2 (ENSLAFG00000008510) #30 DMRT3 (ENSLAFG00000028125) #31 ENSLAFG00000010638 #32 ENSLAFG00000031278 #33 ENSLAFG00000010633 #33 DOCK8 (ENSLAFG00000010626) #34 ENSLAFG00000006679 #35 PGM5 (ENSLAFG00000015785) #36 TMEM252 (ENSLAFG00000015792) #37 Afrotheria ANCESTRAL SPECIES 145 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896.m #22 ENSGT00940000156896.n #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00390000015476.d.b ENSGT01050000248464 Tenrec MODERN SPECIES 1022 GLIS3 (ENSETEG00000015977) #22 Afrotheria_a ANCESTRAL SPECIES 145 ENSGT00940000154434.b #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907 #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00900000143153 ENSGT00940000156896.m #22 ENSGT00940000156896.n #22 ENSGT01050000244879.a.a.b #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00390000015476.d.b ENSGT01050000248464 Hyrax MODERN SPECIES 750 GLIS3 (ENSPCAG00000004139) #22 Elephant MODERN SPECIES 593 ENSLAFG00000016963 ENSLAFG00000006436 MED22 (ENSLAFG00000002513) SURF6 (ENSLAFG00000026419) ABO (ENSLAFG00000010293) INSL6 (ENSLAFG00000007479) #14 JAK2 (ENSLAFG00000007471) #15 RCL1 (ENSLAFG00000017495) #16 AK3 (ENSLAFG00000001126) #17 CDC37L1 (ENSLAFG00000001125) #18 SPATA6L (ENSLAFG00000001121) PLPP6 (ENSLAFG00000001123) #20 SLC1A1 (ENSLAFG00000001120) #21 ENSLAFG00000026125 ENSLAFG00000029971 #22 ENSLAFG00000031654 #22 RFX3 (ENSLAFG00000021602) #23 PUM3 (ENSLAFG00000017341) #25 KCNV2 (ENSLAFG00000017292) #26 VLDLR (ENSLAFG00000015211) #28 SMARCA2 (ENSLAFG00000014061) #29 DMRT2 (ENSLAFG00000008510) #30 DMRT3 (ENSLAFG00000028125) #31 ENSLAFG00000010638 #32 ENSLAFG00000031278 #33 ENSLAFG00000010633 #33 DOCK8 (ENSLAFG00000010626) #34 ENSLAFG00000006679 #35 PGM5 (ENSLAFG00000015785) #36 TMEM252 (ENSLAFG00000015792) #37 ENSLAFG00000029981 Marsupialia ANCESTRAL SPECIES 6 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907.a #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000155289.C.a.a.b ENSGT00390000011149 ENSGT00940000153882.a.b.b.a ENSGT00410000025739.c.a ENSGT00550000074873 ENSGT00390000012605 ENSGT00390000000306 ENSGT00940000162728 ENSGT00940000161884 ENSGT00960000187477 ENSGT00940000161466 ENSGT00940000158074 Opossum MODERN SPECIES 5 RIC1 (ENSMODG00000015344) #9 ENSMODG00000015349 ENSMODG00000015352 #12 PLGRKT (ENSMODG00000015353) #13 RFLB (ENSMODG00000048062) #14 JAK2 (ENSMODG00000015373) #15 RCL1 (ENSMODG00000015377) #16 ENSMODG00000029481 AK3 (ENSMODG00000042741) #17 CDC37L1 (ENSMODG00000015385) #18 ENSMODG00000022953 #20 ENSMODG00000051594 #20 ENSMODG00000025440 SLC1A1 (ENSMODG00000015399) #21 ENSMODG00000045366 GLIS3 (ENSMODG00000015403) #22 ENSMODG00000044455 ENSMODG00000039449 RFX3 (ENSMODG00000015410) #23 ENSMODG00000015412 PUM3 (ENSMODG00000015417) #25 PBK (ENSMODG00000015425) ENSMODG00000015420 ENSMODG00000015432 NTN3 (ENSMODG00000015434) TBC1D24 (ENSMODG00000015436) ENSMODG00000042495 AMDHD2 (ENSMODG00000015443) ENSMODG00000028791 ZNF316 (ENSMODG00000015447) ENSMODG00000043808 Marsupialia_b ANCESTRAL SPECIES 11 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907.a #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000155289.C.a.a.b ENSGT00390000011149 ENSGT00940000153882.a.b.b.a ENSGT00410000025739.c.a ENSGT00550000074873 ENSGT00390000012605 ENSGT00390000000306 ENSGT00940000162728 ENSGT00940000161884 ENSGT00960000187477 ENSGT00940000161466 ENSGT00940000158074 Diprotodontia ANCESTRAL SPECIES 19 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907.a #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000155289.C.a.a.b ENSGT00390000011149 ENSGT00940000153882.a.b.b.a ENSGT00410000025739.c.a ENSGT00550000074873 ENSGT00390000012605 ENSGT00390000000306 ENSGT00940000162728 ENSGT00960000187477 ENSGT00940000161884 ENSGT00940000161466 ENSGT00940000158074 Diprotodontia_a ANCESTRAL SPECIES 21 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000160907.a #20 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757.w #25 ENSGT00940000155289.C.a.a.b ENSGT00390000011149 ENSGT00940000153882.a.b.b.a ENSGT00410000025739.c.a ENSGT00550000074873 ENSGT00390000012605 ENSGT00390000000306 ENSGT00940000162728 ENSGT00940000161884.b ENSGT00940000161466 ENSGT00940000158074 ENSGT00390000009084 koala DUPLICATION koala MODERN SPECIES 113 ENSPCIG00000000400 ENSPCIG00000000358 ENSPCIG00000000288 #12 PLGRKT (ENSPCIG00000008213) #13 ENSPCIG00000034412 #14 ENSPCIG00000036019 #14 JAK2 (ENSPCIG00000000252) #15 RCL1 (ENSPCIG00000000188) #16 ENSPCIG00000000144 #17 CDC37L1 (ENSPCIG00000000083) #18 ENSPCIG00000035241 ENSPCIG00000025428 #20 ENSPCIG00000025425 #20 SLC1A1 (ENSPCIG00000001803) #21 ENSPCIG00000032109 #22 ENSPCIG00000024086 #22 RFX3 (ENSPCIG00000024087) #23 ENSPCIG00000030606 PUM3 (ENSPCIG00000030598) #25 ENSPCIG00000030552 ENSPCIG00000030550 NTN3 (ENSPCIG00000030549) TBC1D24 (ENSPCIG00000030548) AMDHD2 (ENSPCIG00000030546) ENSPCIG00000030545 ENSPCIG00000031802 ENSPCIG00000030542 ENSPCIG00000030541 ENSPCIG00000030632 ENSPCIG00000032703 ENSPCIG00000032081 koala MODERN SPECIES 113 RIC1 (ENSPCIG00000000440) #9 ENSPCIG00000000400 ENSPCIG00000000358 ENSPCIG00000000288 #12 PLGRKT (ENSPCIG00000008213) #13 ENSPCIG00000034412 #14 ENSPCIG00000036019 #14 JAK2 (ENSPCIG00000000252) #15 RCL1 (ENSPCIG00000000188) #16 ENSPCIG00000000144 #17 CDC37L1 (ENSPCIG00000000083) #18 ENSPCIG00000035241 ENSPCIG00000025428 #20 ENSPCIG00000025425 #20 SLC1A1 (ENSPCIG00000001803) #21 ENSPCIG00000032109 #22 ENSPCIG00000024086 #22 RFX3 (ENSPCIG00000024087) #23 ENSPCIG00000030606 PUM3 (ENSPCIG00000030598) #25 ENSPCIG00000030552 ENSPCIG00000030550 NTN3 (ENSPCIG00000030549) TBC1D24 (ENSPCIG00000030548) AMDHD2 (ENSPCIG00000030546) ENSPCIG00000030545 ENSPCIG00000031802 ENSPCIG00000030542 ENSPCIG00000030541 ENSPCIG00000030632 ENSPCIG00000032703 Common wonbat MODERN SPECIES 1009 GLDC (ENSVURG00010005739) UHRF2 (ENSVURG00010006652) KIAA2026 (ENSVURG00010006687) MLANA (ENSVURG00010006707) ERMP1 (ENSVURG00010006720) #8 RIC1 (ENSVURG00010006750) #9 CD274 (ENSVURG00010006794) #12 PLGRKT (ENSVURG00010006799) #13 JAK2 (ENSVURG00010006805) #15 RCL1 (ENSVURG00010006818) #16 AK3 (ENSVURG00010006826) #17 CDC37L1 (ENSVURG00010006832) #18 PLPP6 (ENSVURG00010006844) #20 ENSVURG00010006853 SLC1A1 (ENSVURG00010006864) #21 GLIS3 (ENSVURG00010006895) #22 RFX3 (ENSVURG00010006911) #23 ENSVURG00010006948 #25 ENSVURG00010006968 ENSVURG00010006992 NTN3 (ENSVURG00010007004) TBC1D24 (ENSVURG00010007018) ENSVURG00010007067 AMDHD2 (ENSVURG00010007093) ENSVURG00010007136 ENSVURG00010007142 ZNF316 (ENSVURG00010007148) ZKSCAN2 (ENSVURG00010007162) ENSVURG00010007173 ENSVURG00010007181 KDM8 (ENSVURG00010007200) Wallaby MODERN SPECIES 1661 GLIS3 (ENSMEUG00000005102) #22 Tasmanian devil MODERN SPECIES MLANA (ENSSHAG00000006138) ERMP1 (ENSSHAG00000004720) #8 RIC1 (ENSSHAG00000000924) #9 ENSSHAG00000004176 CD274 (ENSSHAG00000002682) #12 PLGRKT (ENSSHAG00000001757) #13 ENSSHAG00000015262 #14 JAK2 (ENSSHAG00000014900) #15 RCL1 (ENSSHAG00000014086) #16 ENSSHAG00000029924 AK3 (ENSSHAG00000028635) #17 CDC37L1 (ENSSHAG00000013393) #18 ENSSHAG00000012947 PLPP6 (ENSSHAG00000026797) #20 SLC1A1 (ENSSHAG00000012371) #21 GLIS3 (ENSSHAG00000030971) #22 ENSSHAG00000028825 RFX3 (ENSSHAG00000003775) #23 ENSSHAG00000002395 ENSSHAG00000003730 #25 ENSSHAG00000000892 ENSSHAG00000031126 ENSSHAG00000025501 ENSSHAG00000014430 ATP6V0C (ENSSHAG00000014251) ENSSHAG00000027414 ENSSHAG00000013445 ENSSHAG00000013237 ENSSHAG00000023033 ENSSHAG00000022299 KDM8 (ENSSHAG00000010301) Platypus MODERN SPECIES 88 MLANA (ENSOANG00000036136) ERMP1 (ENSOANG00000010083) #8 RIC1 (ENSOANG00000010088) #9 ENSOANG00000010090 CD274 (ENSOANG00000010091) #12 PLGRKT (ENSOANG00000013191) #13 ENSOANG00000031851 #14 JAK2 (ENSOANG00000010092) #15 RCL1 (ENSOANG00000013193) #16 AK3 (ENSOANG00000001505) #17 ENSOANG00000049559 CDC37L1 (ENSOANG00000001511) #18 ENSOANG00000036739 ENSOANG00000039420 #20 SLC1A1 (ENSOANG00000013192) #21 GLIS3 (ENSOANG00000014997) #22 RFX3 (ENSOANG00000014996) #23 ENSOANG00000043031 PUM3 (ENSOANG00000014995) #25 KCNV2 (ENSOANG00000014994) #26 VLDLR (ENSOANG00000014993) #28 SMARCA2 (ENSOANG00000008299) #29 ENSOANG00000008297 DMRT2 (ENSOANG00000008296) #30 DMRT3 (ENSOANG00000008295) #31 DMRT1 (ENSOANG00000036834) #32 KANK1 (ENSOANG00000008293) #33 DOCK8 (ENSOANG00000044143) #34 ENSOANG00000012519 #35 ENSOANG00000040009 PGM5 (ENSOANG00000012517) #36 Sauria ANCESTRAL SPECIES 5 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000157140.b.b ENSGT00940000164995 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000157140.b.b ENSGT00940000164995 ENSGT00940000158126 #36 Episquamata ANCESTRAL SPECIES 6 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000157140.b.b ENSGT00940000164995 ENSGT00940000158126 #36 Laterata ANCESTRAL SPECIES 8 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a.i #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000161645.a.e ENSGT00940000158126 #36 ENSGT00390000005250 #37 Common wall lizard MODERN SPECIES 8 ENSPMRG00000022148 ENSPMRG00000022144 ENSPMRG00000022143 ENSPMRG00000022138 ENSPMRG00000022134 TMEM52B (ENSPMRG00000022129) ENSPMRG00000022125 ENSPMRG00000022122 ENSPMRG00000022112 POSTN (ENSPMRG00000021938) SUPT20H (ENSPMRG00000021871) EXOSC8 (ENSPMRG00000021840) ALG5 (ENSPMRG00000021829) TMEM39A (ENSPMRG00000021818) ENSPMRG00000021781 GLIS3 (ENSPMRG00000021747) #22 RFX3 (ENSPMRG00000021654) #23 ENSPMRG00000021639 PUM3 (ENSPMRG00000021630) #25 KCNV2 (ENSPMRG00000021625) #26 ENSPMRG00000021621 VLDLR (ENSPMRG00000021598) #28 ENSPMRG00000021578 SMARCA2 (ENSPMRG00000021519) #29 DMRT2 (ENSPMRG00000021499) #30 DMRT3 (ENSPMRG00000021491) #31 DMRT1 (ENSPMRG00000021487) #32 KANK1 (ENSPMRG00000021475) #33 CDKN2B (ENSPMRG00000021467) CDKN2A (ENSPMRG00000021465) MTAP (ENSPMRG00000021457) Argentine black and white tegu MODERN SPECIES 25 SLC1A1 (ENSSMRG00000012291) #21 SPATA6L (ENSSMRG00000012298) CDC37L1 (ENSSMRG00000012299) #18 AK3 (ENSSMRG00000012300) #17 RCL1 (ENSSMRG00000012305) #16 JAK2 (ENSSMRG00000012306) #15 ENSSMRG00000012307 #14 PLGRKT (ENSSMRG00000012308) #13 PDCD1LG2 (ENSSMRG00000012319) RIC1 (ENSSMRG00000012320) #9 ERMP1 (ENSSMRG00000012324) #8 MLANA (ENSSMRG00000012325) KIAA2026 (ENSSMRG00000012326) ENSSMRG00000012349 GLIS3 (ENSSMRG00000012362) #22 RFX3 (ENSSMRG00000012376) #23 ENSSMRG00000012379 PUM3 (ENSSMRG00000012380) #25 KCNV2 (ENSSMRG00000012381) #26 VLDLR (ENSSMRG00000012387) #28 SMARCA2 (ENSSMRG00000012396) #29 ENSSMRG00000012401 DMRT2 (ENSSMRG00000012412) #30 DMRT3 (ENSSMRG00000012413) #31 DMRT1 (ENSSMRG00000012418) #32 KANK1 (ENSSMRG00000012463) #33 DOCK8 (ENSSMRG00000012483) #34 ENSSMRG00000016054 #35 ENSSMRG00000016056 PGM5 (ENSSMRG00000016057) #36 Toxicofera ANCESTRAL SPECIES 6 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000157140.b.b ENSGT00940000164995 ENSGT00940000158126 #36 Elapidae ANCESTRAL SPECIES 7 ENSGT00940000154930 ENSGT00390000017970 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00530000063839.f #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000157140.b.b ENSGT00940000164995 ENSGT00940000158126 #36 Elapidae_a ANCESTRAL SPECIES 101 ENSGT01010000229860 ENSGT00940000154930.a ENSGT00390000017970 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00530000063839.f #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 Acanthophiinae ANCESTRAL SPECIES 9 ENSGT01010000229860 ENSGT00940000154930.a ENSGT00390000017970 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00530000063839.f #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876.m #34 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000157140.b.b ENSGT00940000164995 Eastern brown snake MODERN SPECIES 23 PTPRD (ENSPTXG00000006046) KDM4C (ENSPTXG00000018744) GLDC (ENSPTXG00000018745) UHRF2 (ENSPTXG00000018746) KIAA2026 (ENSPTXG00000018747) ERMP1 (ENSPTXG00000018748) #8 RIC1 (ENSPTXG00000018749) #9 PDCD1LG2 (ENSPTXG00000018750) PLGRKT (ENSPTXG00000018751) #13 JAK2 (ENSPTXG00000018752) #15 RCL1 (ENSPTXG00000018760) #16 AK3 (ENSPTXG00000018762) #17 CDC37L1 (ENSPTXG00000018763) #18 SLC1A1 (ENSPTXG00000018764) #21 GLIS3 (ENSPTXG00000018766) #22 RFX3 (ENSPTXG00000018767) #23 ENSPTXG00000018793 PUM3 (ENSPTXG00000018794) #25 KCNV2 (ENSPTXG00000018795) #26 VLDLR (ENSPTXG00000018796) #28 SMARCA2 (ENSPTXG00000018801) #29 DMRT2 (ENSPTXG00000018805) #30 DMRT3 (ENSPTXG00000018806) #31 DMRT1 (ENSPTXG00000018807) #32 KANK1 (ENSPTXG00000018808) #33 DOCK8 (ENSPTXG00000018810) #34 ENSPTXG00000018860 #35 ENSPTXG00000018861 PGM5 (ENSPTXG00000018862) #36 TMEM252 (ENSPTXG00000018863) #37 Mainland tiger snake MODERN SPECIES 1 GLDC (ENSNSUG00000019946) UHRF2 (ENSNSUG00000019944) KIAA2026 (ENSNSUG00000019940) ENSNSUG00000019939 #8 ENSNSUG00000019938 #8 RIC1 (ENSNSUG00000019937) #9 PDCD1LG2 (ENSNSUG00000019936) PLGRKT (ENSNSUG00000019935) #13 JAK2 (ENSNSUG00000019934) #15 ENSNSUG00000019932 #16 ENSNSUG00000019931 #16 AK3 (ENSNSUG00000019930) #17 CDC37L1 (ENSNSUG00000019929) #18 SPATA6L (ENSNSUG00000019928) SLC1A1 (ENSNSUG00000019926) #21 GLIS3 (ENSNSUG00000019925) #22 RFX3 (ENSNSUG00000019919) #23 ENSNSUG00000019918 PUM3 (ENSNSUG00000019917) #25 KCNV2 (ENSNSUG00000019916) #26 VLDLR (ENSNSUG00000019901) #28 SMARCA2 (ENSNSUG00000018108) #29 DMRT2 (ENSNSUG00000018057) #30 DMRT3 (ENSNSUG00000018056) #31 DMRT1 (ENSNSUG00000018051) #32 KANK1 (ENSNSUG00000018050) #33 DOCK8 (ENSNSUG00000018049) #34 ENSNSUG00000018048 ENSNSUG00000018047 PGM5 (ENSNSUG00000018044) #36 TMEM252 (ENSNSUG00000018038) #37 Indian cobra MODERN SPECIES 1 ENSNNAG00000013031 KDM4C (ENSNNAG00000013058) GLDC (ENSNNAG00000013176) UHRF2 (ENSNNAG00000013890) KIAA2026 (ENSNNAG00000014777) ERMP1 (ENSNNAG00000014841) #8 RIC1 (ENSNNAG00000015205) #9 PDCD1LG2 (ENSNNAG00000015251) PLGRKT (ENSNNAG00000015298) #13 JAK2 (ENSNNAG00000015311) #15 RCL1 (ENSNNAG00000015339) #16 AK3 (ENSNNAG00000015359) #17 CDC37L1 (ENSNNAG00000015380) #18 SLC1A1 (ENSNNAG00000015451) #21 ENSNNAG00000015513 GLIS3 (ENSNNAG00000015518) #22 RFX3 (ENSNNAG00000015581) #23 ENSNNAG00000015896 ENSNNAG00000015953 #25 ENSNNAG00000015978 #25 KCNV2 (ENSNNAG00000016029) #26 VLDLR (ENSNNAG00000016101) #28 SMARCA2 (ENSNNAG00000016662) #29 DMRT2 (ENSNNAG00000017421) #30 DMRT3 (ENSNNAG00000017425) #31 DMRT1 (ENSNNAG00000017439) #32 KANK1 (ENSNNAG00000017462) #33 ENSNNAG00000017470 #34 ENSNNAG00000017479 #34 ENSNNAG00000017496 #34 ENSNNAG00000017514 #35 Lizard MODERN SPECIES 1 MLANA (ENSACAG00000004131) ERMP1 (ENSACAG00000004052) #8 RIC1 (ENSACAG00000003988) #9 PDCD1LG2 (ENSACAG00000029075) PLGRKT (ENSACAG00000003966) #13 ENSACAG00000024061 #14 ENSACAG00000042874 JAK2 (ENSACAG00000003673) #15 RCL1 (ENSACAG00000003640) #16 AK3 (ENSACAG00000003605) #17 CDC37L1 (ENSACAG00000003578) #18 SPATA6L (ENSACAG00000029209) ENSACAG00000043625 SLC1A1 (ENSACAG00000003433) #21 ENSACAG00000036408 GLIS3 (ENSACAG00000003374) #22 RFX3 (ENSACAG00000003262) #23 ENSACAG00000035469 ENSACAG00000003227 PUM3 (ENSACAG00000003174) #25 KCNV2 (ENSACAG00000003138) #26 VLDLR (ENSACAG00000003015) #28 SMARCA2 (ENSACAG00000002423) #29 DMRT2 (ENSACAG00000002411) #30 DMRT3 (ENSACAG00000002401) #31 DMRT1 (ENSACAG00000002356) #32 KANK1 (ENSACAG00000002270) #33 ENSACAG00000036574 DOCK8 (ENSACAG00000001924) #34 ENSACAG00000001658 #35 ENSACAG00000008130 tuatara DUPLICATION tuatara MODERN SPECIES 1196 ENSSPUG00000001985 #22 ENSSPUG00000001966 #22 ENSSPUG00000001944 RFX3 (ENSSPUG00000001791) #23 ENSSPUG00000001722 PUM3 (ENSSPUG00000001707) #25 KCNV2 (ENSSPUG00000001702) #26 VLDLR (ENSSPUG00000001691) #28 SMARCA2 (ENSSPUG00000001629) #29 tuatara MODERN SPECIES 1196 ENSSPUG00000001985 #22 ENSSPUG00000001966 #22 ENSSPUG00000001944 RFX3 (ENSSPUG00000001791) #23 ENSSPUG00000001722 PUM3 (ENSSPUG00000001707) #25 KCNV2 (ENSSPUG00000001702) #26 VLDLR (ENSSPUG00000001691) #28 SMARCA2 (ENSSPUG00000001629) #29 Archelosauria ANCESTRAL SPECIES 7 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00910000144227.t ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 Cryptodira ANCESTRAL SPECIES 48 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00950000185504 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00950000185504 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 Emydidae ANCESTRAL SPECIES 20 ENSGT00940000158577 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00950000185504 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 painted turtle MODERN SPECIES 15 FRMD3 (ENSCPBG00000025494) ENSCPBG00000025493 ENSCPBG00000025492 ERMP1 (ENSCPBG00000025490) #8 RIC1 (ENSCPBG00000025489) #9 PDCD1LG2 (ENSCPBG00000025487) CD274 (ENSCPBG00000025486) #12 PLGRKT (ENSCPBG00000025485) #13 ENSCPBG00000025484 #14 JAK2 (ENSCPBG00000025483) #15 RCL1 (ENSCPBG00000025481) #16 AK3 (ENSCPBG00000025480) #17 CDC37L1 (ENSCPBG00000025479) #18 SPATA6L (ENSCPBG00000025478) SLC1A1 (ENSCPBG00000025475) #21 GLIS3 (ENSCPBG00000025474) #22 RFX3 (ENSCPBG00000025473) #23 ENSCPBG00000025471 PUM3 (ENSCPBG00000025470) #25 KCNV2 (ENSCPBG00000025469) #26 VLDLR (ENSCPBG00000025468) #28 SMARCA2 (ENSCPBG00000025463) #29 DMRT2 (ENSCPBG00000025462) #30 DMRT3 (ENSCPBG00000025461) #31 DMRT1 (ENSCPBG00000025458) #32 KANK1 (ENSCPBG00000025457) #33 ENSCPBG00000025452 DOCK8 (ENSCPBG00000025439) #34 ENSCPBG00000025429 #35 PGM5 (ENSCPBG00000025365) #36 TMEM252 (ENSCPBG00000025354) #37 Three-toed box turtle MODERN SPECIES 50 FRMD3 (ENSTMTG00000016969) ENSTMTG00000016945 ENSTMTG00000016905 ERMP1 (ENSTMTG00000016873) #8 RIC1 (ENSTMTG00000016776) #9 PDCD1LG2 (ENSTMTG00000016752) CD274 (ENSTMTG00000016745) #12 PLGRKT (ENSTMTG00000016710) #13 ENSTMTG00000016706 #14 JAK2 (ENSTMTG00000016660) #15 RCL1 (ENSTMTG00000016634) #16 AK3 (ENSTMTG00000016623) #17 CDC37L1 (ENSTMTG00000016607) #18 SPATA6L (ENSTMTG00000016584) SLC1A1 (ENSTMTG00000016551) #21 GLIS3 (ENSTMTG00000016537) #22 RFX3 (ENSTMTG00000016347) #23 ENSTMTG00000016298 PUM3 (ENSTMTG00000016264) #25 KCNV2 (ENSTMTG00000016251) #26 VLDLR (ENSTMTG00000016110) #28 SMARCA2 (ENSTMTG00000016037) #29 DMRT2 (ENSTMTG00000016004) #30 DMRT3 (ENSTMTG00000015991) #31 DMRT1 (ENSTMTG00000015977) #32 ENSTMTG00000015959 KANK1 (ENSTMTG00000015933) #33 ENSTMTG00000015924 DOCK8 (ENSTMTG00000006799) #34 ENSTMTG00000006284 #35 PGM5 (ENSTMTG00000006248) #36 Testudinidae ANCESTRAL SPECIES 15 ENSGT00940000158577 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00950000186013 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757.c #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a.ib #33 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000157140.b.b ENSGT00940000158126 #36 Goode s thornscrub tortoise MODERN SPECIES 20 FRMD3 (ENSGEVG00005017673) MLANA (ENSGEVG00005017623) ERMP1 (ENSGEVG00005017610) #8 RIC1 (ENSGEVG00005017573) #9 PDCD1LG2 (ENSGEVG00005017549) CD274 (ENSGEVG00005017525) #12 PLGRKT (ENSGEVG00005017508) #13 ENSGEVG00005017487 #14 JAK2 (ENSGEVG00005017459) #15 RCL1 (ENSGEVG00005017434) #16 AK3 (ENSGEVG00005017423) #17 CDC37L1 (ENSGEVG00005017405) #18 SPATA6L (ENSGEVG00005017368) SLC1A1 (ENSGEVG00005017274) #21 ENSGEVG00005017260 GLIS3 (ENSGEVG00005017217) #22 RFX3 (ENSGEVG00005017166) #23 ENSGEVG00005017017 ENSGEVG00005016771 #25 KCNV2 (ENSGEVG00005016696) #26 SMARCA2 (ENSGEVG00005015950) #29 DMRT2 (ENSGEVG00005015890) #30 DMRT3 (ENSGEVG00005015865) #31 DMRT1 (ENSGEVG00005015585) #32 KANK1 (ENSGEVG00005015437) #33 DOCK8 (ENSGEVG00005015343) #34 ENSGEVG00005015265 #35 PGM5 (ENSGEVG00005014982) #36 TMEM252 (ENSGEVG00005014919) #37 PIP5K1B (ENSGEVG00005014815) FXN (ENSGEVG00005014780) Abingdon island giant tortoise MODERN SPECIES 2200 ENSCABG00000019356 SLC1A1 (ENSCABG00000019357) #21 ENSCABG00000019358 GLIS3 (ENSCABG00000019359) #22 RFX3 (ENSCABG00000019365) #23 ENSCABG00000019407 ENSCABG00000019410 #25 KCNV2 (ENSCABG00000019411) #26 VLDLR (ENSCABG00000019415) #28 SMARCA2 (ENSCABG00000019732) #29 ENSCABG00000022392 DMRT2 (ENSCABG00000022399) #30 DMRT3 (ENSCABG00000022401) #31 DMRT1 (ENSCABG00000022413) #32 ENSCABG00000022432 #33 ENSCABG00000022433 #33 ENSCABG00000022434 #34 ENSCABG00000022437 #34 ENSCABG00000022438 Chinese turtle MODERN SPECIES 475 KIAA2026 (ENSPSIG00000005276) MLANA (ENSPSIG00000005246) ENSPSIG00000017249 ERMP1 (ENSPSIG00000015685) #8 RIC1 (ENSPSIG00000015494) #9 CD274 (ENSPSIG00000015064) #12 PLGRKT (ENSPSIG00000015021) #13 JAK2 (ENSPSIG00000012878) #15 RCL1 (ENSPSIG00000012302) #16 AK3 (ENSPSIG00000011687) #17 CDC37L1 (ENSPSIG00000010470) #18 ENSPSIG00000010075 SLC1A1 (ENSPSIG00000007272) #21 GLIS3 (ENSPSIG00000005966) #22 Archosauria ANCESTRAL SPECIES 31 ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00910000144227.t ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 Aves ANCESTRAL SPECIES 45 ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000158126 #36 Neognathae ANCESTRAL SPECIES 12 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000158126 #36 Neognathae_b ANCESTRAL SPECIES 5 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00390000017970 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00940000155897.mb.a Golden eagle MODERN SPECIES 91 UHRF2 (ENSACCG00020013943) KIAA2026 (ENSACCG00020013976) MLANA (ENSACCG00020013991) ENSACCG00020014001 ERMP1 (ENSACCG00020014143) #8 RIC1 (ENSACCG00020014383) #9 PDCD1LG2 (ENSACCG00020014424) ENSACCG00020014444 PLGRKT (ENSACCG00020014461) #13 ENSACCG00020014475 #14 JAK2 (ENSACCG00020014493) #15 RCL1 (ENSACCG00020014540) #16 AK3 (ENSACCG00020014563) #17 CDC37L1 (ENSACCG00020014575) #18 SLC1A1 (ENSACCG00020014593) #21 GLIS3 (ENSACCG00020014613) #22 RFX3 (ENSACCG00020014653) #23 ENSACCG00020014683 PUM3 (ENSACCG00020014700) #25 KCNV2 (ENSACCG00020014716) #26 VLDLR (ENSACCG00020014749) #28 SMARCA2 (ENSACCG00020014838) #29 DMRT2 (ENSACCG00020014901) #30 DMRT3 (ENSACCG00020014910) #31 DMRT1 (ENSACCG00020014930) #32 ENSACCG00020014951 #33 ENSACCG00020014971 #33 DOCK8 (ENSACCG00020016450) #34 ENSACCG00020016750 #35 PGM5 (ENSACCG00020016754) #36 TMEM252 (ENSACCG00020016759) #37 Kakapo MODERN SPECIES 19 ENSSHBG00005017358 GLDC (ENSSHBG00005017361) UHRF2 (ENSSHBG00005017370) KIAA2026 (ENSSHBG00005017376) MLANA (ENSSHBG00005017380) ENSSHBG00005017383 ERMP1 (ENSSHBG00005017385) #8 RIC1 (ENSSHBG00005017400) #9 PDCD1LG2 (ENSSHBG00005017476) ENSSHBG00005017481 #14 JAK2 (ENSSHBG00005017499) #15 RCL1 (ENSSHBG00005017541) #16 SLC1A1 (ENSSHBG00005017548) #21 CDC37L1 (ENSSHBG00005017553) #18 AK3 (ENSSHBG00005017556) #17 GLIS3 (ENSSHBG00005017563) #22 ENSSHBG00005017571 #23 ENSSHBG00005017578 PUM3 (ENSSHBG00005017598) #25 KCNV2 (ENSSHBG00005017626) #26 VLDLR (ENSSHBG00005017636) #28 SMARCA2 (ENSSHBG00005017989) #29 DMRT2 (ENSSHBG00005020185) #30 DMRT3 (ENSSHBG00005020188) #31 DMRT1 (ENSSHBG00005020193) #32 ENSSHBG00005020196 #33 ENSSHBG00005020200 #33 DOCK8 (ENSSHBG00005020306) #34 ENSSHBG00005020597 #35 PGM5 (ENSSHBG00005020602) #36 TMEM252 (ENSSHBG00005020607) #37 Passeriformes ANCESTRAL SPECIES 7 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000162777.a.a.a.a ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Great tit MODERN SPECIES 642 MLANA (ENSPMJG00000016227) ENSPMJG00000016226 ERMP1 (ENSPMJG00000016217) #8 RIC1 (ENSPMJG00000016216) #9 PDCD1LG2 (ENSPMJG00000016214) CD274 (ENSPMJG00000016213) #12 PLGRKT (ENSPMJG00000016212) #13 ENSPMJG00000016211 #14 JAK2 (ENSPMJG00000016210) #15 RCL1 (ENSPMJG00000016208) #16 AK3 (ENSPMJG00000016207) #17 CDC37L1 (ENSPMJG00000016206) #18 ENSPMJG00000016205 ENSPMJG00000016204 SLC1A1 (ENSPMJG00000016203) #21 GLIS3 (ENSPMJG00000016202) #22 RFX3 (ENSPMJG00000016201) #23 ENSPMJG00000016200 PUM3 (ENSPMJG00000016199) #25 KCNV2 (ENSPMJG00000016198) #26 VLDLR (ENSPMJG00000016197) #28 SMARCA2 (ENSPMJG00000016196) #29 DMRT2 (ENSPMJG00000016193) #30 DMRT1 (ENSPMJG00000016192) #32 KANK1 (ENSPMJG00000016191) #33 DOCK8 (ENSPMJG00000016190) #34 ENSPMJG00000016189 #35 ENSPMJG00000016188 #37 PGM5 (ENSPMJG00000016187) #36 MAP1B (ENSPMJG00000016186) MRPS27 (ENSPMJG00000016185) Passeriformes_d ANCESTRAL SPECIES 6 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00390000000375 #13 ENSGT00940000169000 ENSGT00940000155640 #15 ENSGT00530000063404.a.k #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01100000265023 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000162777.a.a.a.a ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 Passeriformes_g ANCESTRAL SPECIES 7 ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000161430 #12 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a.k #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00960000189358 ENSGT00940000155319.g.b.a.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01100000265023 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000162777.a.a.a.a ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 Passeroidea ANCESTRAL SPECIES 23 ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000169000 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a.k #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00960000189358 ENSGT00940000155319.g.b.a.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01100000265023 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000162777.a.a.a.a ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00960000189645 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 Common canary MODERN SPECIES 78 ENSSCAG00000000200 ERMP1 (ENSSCAG00000000280) #8 RIC1 (ENSSCAG00000000523) #9 PDCD1LG2 (ENSSCAG00000000891) ENSSCAG00000000913 ENSSCAG00000000933 #14 JAK2 (ENSSCAG00000000972) #15 RCL1 (ENSSCAG00000001093) #16 AK3 (ENSSCAG00000001174) #17 ENSSCAG00000001187 #18 ENSSCAG00000001199 ENSSCAG00000001207 SLC1A1 (ENSSCAG00000001213) #21 GLIS3 (ENSSCAG00000001222) #22 ENSSCAG00000001245 GLDC (ENSSCAG00000001260) UHRF2 (ENSSCAG00000001304) KIAA2026 (ENSSCAG00000001403) MLANA (ENSSCAG00000001433) Zebra finch MODERN SPECIES 104 MLANA (ENSTGUG00000025611) ENSTGUG00000004979 ERMP1 (ENSTGUG00000004990) #8 RIC1 (ENSTGUG00000005013) #9 PDCD1LG2 (ENSTGUG00000025704) ENSTGUG00000005033 ENSTGUG00000005041 JAK2 (ENSTGUG00000005043) #15 RCL1 (ENSTGUG00000005138) #16 AK3 (ENSTGUG00000005155) #17 CDC37L1 (ENSTGUG00000005189) #18 ENSTGUG00000029693 ENSTGUG00000019342 ENSTGUG00000005203 SLC1A1 (ENSTGUG00000005214) #21 GLIS3 (ENSTGUG00000005266) #22 ENSTGUG00000024012 ENSTGUG00000022949 RFX3 (ENSTGUG00000005287) #23 ENSTGUG00000005327 PUM3 (ENSTGUG00000005339) #25 KCNV2 (ENSTGUG00000018853) #26 ENSTGUG00000005381 VLDLR (ENSTGUG00000005386) #28 SMARCA2 (ENSTGUG00000005460) #29 DMRT2 (ENSTGUG00000005515) #30 DMRT3 (ENSTGUG00000005521) #31 DMRT1 (ENSTGUG00000005524) #32 KANK1 (ENSTGUG00000005531) #33 DOCK8 (ENSTGUG00000005550) #34 ENSTGUG00000005631 #35 Medium ground finch MODERN SPECIES 93 KIAA2026 (ENSGFOG00000000299) MLANA (ENSGFOG00000000290) ENSGFOG00000000282 ERMP1 (ENSGFOG00000000270) #8 RIC1 (ENSGFOG00000000248) #9 PDCD1LG2 (ENSGFOG00000000042) CD274 (ENSGFOG00000012364) #12 JAK2 (ENSGFOG00000011351) #15 RCL1 (ENSGFOG00000011325) #16 AK3 (ENSGFOG00000011319) #17 CDC37L1 (ENSGFOG00000011314) #18 ENSGFOG00000011313 ENSGFOG00000011312 ENSGFOG00000011306 SLC1A1 (ENSGFOG00000011302) #21 GLIS3 (ENSGFOG00000011299) #22 Flycatcher MODERN SPECIES 561 ERMP1 (ENSFALG00000010587) #8 RIC1 (ENSFALG00000010582) #9 ENSFALG00000010572 #12 PLGRKT (ENSFALG00000010567) #13 ENSFALG00000026503 JAK2 (ENSFALG00000010563) #15 ENSFALG00000027655 #16 ENSFALG00000010553 #16 ENSFALG00000025956 AK3 (ENSFALG00000010543) #17 CDC37L1 (ENSFALG00000023426) #18 ENSFALG00000010531 ENSFALG00000010526 ENSFALG00000014597 SLC1A1 (ENSFALG00000010522) #21 GLIS3 (ENSFALG00000010519) #22 ENSFALG00000027595 RFX3 (ENSFALG00000010515) #23 ENSFALG00000010512 PUM3 (ENSFALG00000010509) #25 KCNV2 (ENSFALG00000010508) #26 VLDLR (ENSFALG00000010477) #28 SMARCA2 (ENSFALG00000010416) #29 ENSFALG00000023612 DMRT2 (ENSFALG00000010393) #30 DMRT3 (ENSFALG00000010391) #31 DMRT1 (ENSFALG00000010388) #32 KANK1 (ENSFALG00000010385) #33 DOCK8 (ENSFALG00000010346) #34 ENSFALG00000010329 #35 ENSFALG00000010321 #36 Galloanserae ANCESTRAL SPECIES 11 ENSGT00390000017970 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000154396.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 Anatidae ANCESTRAL SPECIES 20 ENSGT00390000017970 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000154396.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00950000185125 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00940000155897.mb.a Pink-footed goose MODERN SPECIES 236 SLC1A1 (ENSABRG00000009175) #21 GLIS3 (ENSABRG00000009214) #22 ENSABRG00000009271 #23 ENSABRG00000009339 PUM3 (ENSABRG00000009367) #25 KCNV2 (ENSABRG00000009444) #26 VLDLR (ENSABRG00000009580) #28 SMARCA2 (ENSABRG00000010971) #29 Duck MODERN SPECIES 4281 KIAA2026 (ENSAPLG00000003748) MLANA (ENSAPLG00000003877) ENSAPLG00000003923 ENSAPLG00000030581 #8 ENSAPLG00000028854 #8 RIC1 (ENSAPLG00000004154) #9 PDCD1LG2 (ENSAPLG00000004593) ENSAPLG00000004669 PLGRKT (ENSAPLG00000018947) #13 ENSAPLG00000011419 JAK2 (ENSAPLG00000004748) #15 RCL1 (ENSAPLG00000006031) #16 AK3 (ENSAPLG00000006356) #17 CDC37L1 (ENSAPLG00000006614) #18 SLC1A1 (ENSAPLG00000015022) #21 GLIS3 (ENSAPLG00000014844) #22 RFX3 (ENSAPLG00000011096) #23 ENSAPLG00000019362 PUM3 (ENSAPLG00000002920) #25 KCNV2 (ENSAPLG00000018126) #26 ENSAPLG00000015474 #28 SMARCA2 (ENSAPLG00000013873) #29 DMRT2 (ENSAPLG00000013872) #30 DMRT3 (ENSAPLG00000013743) #31 KANK1 (ENSAPLG00000020411) #33 ENSAPLG00000012724 #34 ENSAPLG00000017480 #34 ENSAPLG00000025062 ENSAPLG00000012182 #35 TMEM252 (ENSAPLG00000010990) #37 PGM5 (ENSAPLG00000011043) #36 Phasianidae ANCESTRAL SPECIES 5 ENSGT00940000154930 ENSGT00390000017970 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000154396.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a.db.b #33 ENSGT00940000154886.a.a.db.a #33 ENSGT00940000155876.e.a #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00940000155897.mb.a Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00940000154930 ENSGT00390000017970 ENSGT00390000008296.b.a.a ENSGT00390000011483 ENSGT00390000009531 ENSGT00940000164450 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00940000154396.a ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b.e #23 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000154886.a.a.db.a #33 ENSGT00940000155876.e.a #34 ENSGT00640000091523 #35 ENSGT00940000158126 #36 ENSGT00390000005250 #37 ENSGT00940000155897.mb.a ENSGT00390000007246 ENSGT00390000009329 Chicken MODERN SPECIES 131 GLDC (ENSGALG00010012973) UHRF2 (ENSGALG00010012965) KIAA2026 (ENSGALG00010012952) MLANA (ENSGALG00010012923) ENSGALG00010012919 ERMP1 (ENSGALG00010012904) #8 RIC1 (ENSGALG00010012889) #9 PDCD1LG2 (ENSGALG00010013312) CD274 (ENSGALG00010012871) RLN3 (ENSGALG00010012847) JAK2 (ENSGALG00010012833) #15 RCL1 (ENSGALG00010011222) #16 AK3 (ENSGALG00010011143) #17 CDC37L1 (ENSGALG00010011133) #18 SLC1A1 (ENSGALG00010011937) #21 GLIS3 (ENSGALG00010010147) #22 RFX3 (ENSGALG00010011873) #23 PUM3 (ENSGALG00010011384) #25 KCNV2 (ENSGALG00010010198) #26 VLDLR (ENSGALG00010011837) #28 SMARCA2 (ENSGALG00010011808) #29 DMRT2 (ENSGALG00010011482) #30 ENSGALG00010011462 DMRT1 (ENSGALG00010011437) #31 KANK1 (ENSGALG00010011351) #33 DOCK8 (ENSGALG00010011311) #34 CBWD1 (ENSGALG00010011287) #35 PGM5 (ENSGALG00010011887) #36 TMEM252 (ENSGALG00010011444) #37 MAP1B (ENSGALG00010011681) MRPS27 (ENSGALG00010011649) Japanese quail MODERN SPECIES 699 GLDC (ENSCJPG00005003257) UHRF2 (ENSCJPG00005003255) KIAA2026 (ENSCJPG00005003247) MLANA (ENSCJPG00005003245) ENSCJPG00005003242 ERMP1 (ENSCJPG00005003237) #8 RIC1 (ENSCJPG00005003232) #9 PDCD1LG2 (ENSCJPG00005003231) ENSCJPG00005003230 ENSCJPG00005003229 JAK2 (ENSCJPG00005003214) #15 RCL1 (ENSCJPG00005003205) #16 AK3 (ENSCJPG00005003204) #17 CDC37L1 (ENSCJPG00005003200) #18 SLC1A1 (ENSCJPG00005003195) #21 GLIS3 (ENSCJPG00005003188) #22 RFX3 (ENSCJPG00005003180) #23 PUM3 (ENSCJPG00005003170) #25 KCNV2 (ENSCJPG00005003166) #26 VLDLR (ENSCJPG00005002212) #28 SMARCA2 (ENSCJPG00005002199) #29 DMRT2 (ENSCJPG00005002194) #30 DMRT3 (ENSCJPG00005002191) #31 DMRT1 (ENSCJPG00005002189) #32 KANK1 (ENSCJPG00005002171) #33 DOCK8 (ENSCJPG00005002158) #34 ENSCJPG00005002115 #35 PGM5 (ENSCJPG00005002107) #36 TMEM252 (ENSCJPG00005002105) #37 MAP1B (ENSCJPG00005002102) MRPS27 (ENSCJPG00005002094) African ostrich MODERN SPECIES 923 GLIS3 (ENSSCUG00000016965) #22 RFX3 (ENSSCUG00000016961) #23 ENSSCUG00000016959 PUM3 (ENSSCUG00000016947) #25 VLDLR (ENSSCUG00000016871) #28 ENSSCUG00000016608 #29 Australian saltwater crocodile MODERN SPECIES 67 GLDC (ENSCPRG00005003953) UHRF2 (ENSCPRG00005004283) KIAA2026 (ENSCPRG00005004297) ERMP1 (ENSCPRG00005004304) #8 RIC1 (ENSCPRG00005004338) #9 PDCD1LG2 (ENSCPRG00005004350) ENSCPRG00005004356 PLGRKT (ENSCPRG00005004366) #13 ENSCPRG00005004371 #14 JAK2 (ENSCPRG00005004373) #15 RCL1 (ENSCPRG00005004387) #16 AK3 (ENSCPRG00005004395) #17 CDC37L1 (ENSCPRG00005004396) #18 SPATA6L (ENSCPRG00005004407) SLC1A1 (ENSCPRG00005004424) #21 GLIS3 (ENSCPRG00005004466) #22 RFX3 (ENSCPRG00005004493) #23 ENSCPRG00005004519 PUM3 (ENSCPRG00005004547) #25 KCNV2 (ENSCPRG00005004751) #26 VLDLR (ENSCPRG00005004758) #28 ENSCPRG00005004774 SMARCA2 (ENSCPRG00005004803) #29 DMRT2 (ENSCPRG00005004868) #30 DMRT3 (ENSCPRG00005004879) #31 DMRT1 (ENSCPRG00005004893) #32 KANK1 (ENSCPRG00005004939) #33 DOCK8 (ENSCPRG00005004968) #34 ENSCPRG00005005028 #35 PGM5 (ENSCPRG00005005087) #36 TMEM252 (ENSCPRG00005005520) #37 Anura ANCESTRAL SPECIES 29 ENSGT00390000017970 ENSGT00390000008296.b.b ENSGT00390000011483 ENSGT00390000009531 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000161373 ENSGT00390000000375 #13 ENSGT00940000154434 #14 ENSGT00940000155640 #15 ENSGT00530000063404.a #16 ENSGT00940000155120 #17 ENSGT00390000013443.d #18 ENSGT00530000063821.b.b ENSGT00940000155397.b #21 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000164013 ENSGT00390000015757 #25 ENSGT00940000157438 #26 ENSGT00940000155460 #28 ENSGT00940000154821.b #29 ENSGT00940000156282.a.a #30 ENSGT00940000160420 #31 ENSGT00940000156489 #32 ENSGT00940000154886.a.a #33 ENSGT00940000155876 #34 ENSGT00640000091523 #35 ENSGT00940000164556 ENSGT00940000163497 ENSGT00940000157140.a Frog MODERN SPECIES kiaa2026 (ENSXETG00000000574) fxn (ENSXETG00000039175) mlana (ENSXETG00000037374) ermp1 (ENSXETG00000000577) #8 ric1 (ENSXETG00000000582) #9 pdcd1lg2 (ENSXETG00000040791) ENSXETG00000036720 plgrkt (ENSXETG00000000587) #13 jak2 (ENSXETG00000000586) #15 ENSXETG00000042090 rcl1 (ENSXETG00000000592) #16 ak3 (ENSXETG00000000588) #17 cdc37l1 (ENSXETG00000000595) #18 spata6l (ENSXETG00000030483) slc1a1 (ENSXETG00000011685) #21 glis3 (ENSXETG00000011692) #22 rfx3 (ENSXETG00000011698) #23 crygbl.2 (ENSXETG00000048659) carm1p1 (ENSXETG00000036672) pum3 (ENSXETG00000011707) #25 kcnv2 (ENSXETG00000011708) #26 vldlr (ENSXETG00000011709) #28 smarca2 (ENSXETG00000015299) #29 dmrt2 (ENSXETG00000033983) #30 dmrt3 (ENSXETG00000015285) #31 dmrt1 (ENSXETG00000002277) #32 kank1 (ENSXETG00000002278) #33 dock8 (ENSXETG00000001648) #34 cbwd2 (ENSXETG00000001656) #35 cbwd1.1 (ENSXETG00000001666) XB5815362 [provisional:cyp2j6] (ENSXETG00000001660) Leishan spiny toad MODERN SPECIES RIC1 (ENSLLEG00000001526) #9 ENSLLEG00000001500 PDCD1LG2 (ENSLLEG00000001467) ENSLLEG00000001414 PLGRKT (ENSLLEG00000001384) #13 ENSLLEG00000001371 #14 JAK2 (ENSLLEG00000001323) #15 ENSLLEG00000001296 RCL1 (ENSLLEG00000001251) #16 ENSLLEG00000001238 AK3 (ENSLLEG00000001204) #17 CDC37L1 (ENSLLEG00000001174) #18 SPATA6L (ENSLLEG00000001082) SLC1A1 (ENSLLEG00000001013) #21 ENSLLEG00000000928 GLIS3 (ENSLLEG00000000897) #22 ENSLLEG00000000876 ENSLLEG00000000868 RFX3 (ENSLLEG00000000718) #23 PUM3 (ENSLLEG00000000665) #25 KCNV2 (ENSLLEG00000000652) #26 VLDLR (ENSLLEG00000000597) #28 ENSLLEG00000000580 SMARCA2 (ENSLLEG00000000350) #29 ENSLLEG00000000280 ENSLLEG00000000269 ENSLLEG00000000229 DMRT2 (ENSLLEG00000000206) #30 ENSLLEG00000000201 DMRT3 (ENSLLEG00000000195) #31 DMRT1 (ENSLLEG00000000180) #32 Coelacanth MODERN SPECIES 705 si:dkey-3h3.3 (ENSLACG00000003908) AK3 (ENSLACG00000004544) #17 CDC37L1 (ENSLACG00000005200) #18 SPATA6L (ENSLACG00000022591) SLC1A1 (ENSLACG00000007779) #21 ENSLACG00000010250 GLIS3 (ENSLACG00000011383) #22 ENSLACG00000011838 Actinopterygii ANCESTRAL SPECIES 832 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 Neopterygii ANCESTRAL SPECIES 254 ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT01030000235745 ENSGT00910000144252 ENSGT00940000160278 ENSGT01100000263502.B.a.b ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00390000001063 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 Osteoglossocephalai ANCESTRAL SPECIES 736 ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 Clupeocephala ANCESTRAL SPECIES 342 ENSGT01100000263502.B.a.b.a ENSGT01100000263502.B.a.a.d.b.c.b ENSGT00940000154877.C ENSGT00940000154877.A ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b Otomorpha ANCESTRAL SPECIES 94 ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00530000063811.B.b ENSGT00940000155182.a ENSGT00940000156383.b.d ENSGT00940000156871.p ENSGT00940000163530 ENSGT00940000156839 ENSGT00950000182923.C.b ENSGT00940000159623 ENSGT00530000063749.c.b Clupeiformes ANCESTRAL SPECIES 12 ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00530000063811.B.b ENSGT00940000155182.a ENSGT00940000156383.b.d ENSGT00940000156871.p ENSGT00940000163530 ENSGT00940000156839 ENSGT00950000182923.C.b ENSGT00940000159623 ENSGT00530000063749.c.b Atlantic herring MODERN SPECIES 13 ENSCHAG00000026880 cldn23.1 (ENSCHAG00000026885) ENSCHAG00000026891 ENSCHAG00000026934 uqcr10 (ENSCHAG00000027023) ENSCHAG00000027025 CABP7 (ENSCHAG00000027027) WDR70 (ENSCHAG00000027037) ENSCHAG00000027088 gdnfa (ENSCHAG00000027090) EGFLAM (ENSCHAG00000027100) opn4xa (ENSCHAG00000027134) pdlim5b (ENSCHAG00000027143) bmpr1bb (ENSCHAG00000027155) UNC5C (ENSCHAG00000027171) glis3 (ENSCHAG00000027318) #22 rfx3 (ENSCHAG00000027336) #23 smad4a (ENSCHAG00000027364) BMP10 (ENSCHAG00000027368) npffr1l3 (ENSCHAG00000000815) ENSCHAG00000001619 ENSCHAG00000001985 ENSCHAG00000002110 FAM222A (ENSCHAG00000002143) ENSCHAG00000002157 git2b (ENSCHAG00000002217) ENSCHAG00000003311 triap1 (ENSCHAG00000007987) srsf9 (ENSCHAG00000008017) GAL3ST1 (ENSCHAG00000008035) epb41l4a (ENSCHAG00000008091) Denticle herring MODERN SPECIES 15 spp1 (ENSDCDG00000018127) cldn23.1 (ENSDCDG00000018123) ENSDCDG00000018113 ENSDCDG00000018096 ENSDCDG00000018093 ENSDCDG00000018050 uqcr10 (ENSDCDG00000017997) zmat5 (ENSDCDG00000017990) CABP7 (ENSDCDG00000017983) WDR70 (ENSDCDG00000015371) gdnfa (ENSDCDG00000015319) opn4xa (ENSDCDG00000015312) pdlim5b (ENSDCDG00000015298) ENSDCDG00000015109 UNC5C (ENSDCDG00000004623) glis3 (ENSDCDG00000004456) #22 rfx3 (ENSDCDG00000004292) #23 smad4a (ENSDCDG00000004267) BMP10 (ENSDCDG00000004250) npffr1l3 (ENSDCDG00000004180) ARVCF (ENSDCDG00000004159) ENSDCDG00000004152 FAM222A (ENSDCDG00000004148) ENSDCDG00000004145 git2b (ENSDCDG00000004105) SGSM1 (ENSDCDG00000002384) triap1 (ENSDCDG00000002317) srsf9 (ENSDCDG00000002314) GAL3ST1 (ENSDCDG00000002312) epb41l4a (ENSDCDG00000002302) apc (ENSDCDG00000002261) Otophysi ANCESTRAL SPECIES 20 ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c.a ENSGT00950000182815.a.a.a.a.a.c.b ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00530000063811.B.b ENSGT00940000155182.a ENSGT00940000156383.b.d ENSGT00940000156871.p ENSGT00940000163530 ENSGT00940000156839 ENSGT00950000182923.C.b ENSGT00940000159623 ENSGT00530000063749.c.b Characiphysae ANCESTRAL SPECIES 42 ENSGT00940000155464.a.a ENSGT00390000010427.c ENSGT00390000016532 ENSGT00730000112225 ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT00940000158504 ENSGT00940000155292.db.a ENSGT00950000182993.A.b.f ENSGT01100000263502.B.a.b.b ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c.b ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00940000181291 ENSGT00530000063811.B.b ENSGT00940000155182.a ENSGT00940000156383.b.d ENSGT00940000156871.p ENSGT00940000163530 ENSGT00940000156839 ENSGT00950000182923.C.b ENSGT00980000203443 Channel catfish MODERN SPECIES 7 ucp2 (ENSIPUG00000021870) Ucp2 (ENSIPUG00000003920) ENSIPUG00000003955 icln (ENSIPUG00000004013) ranbp3l (ENSIPUG00000004048) slc1a3 (ENSIPUG00000004062) nipblb (ENSIPUG00000004101) NUP155 (ENSIPUG00000004317) ENSIPUG00000004588 WDR70 (ENSIPUG00000004634) gdnf (ENSIPUG00000004668) opn4xa (ENSIPUG00000004678) pdlim5b (ENSIPUG00000004731) BMPR1B (ENSIPUG00000004770) UNC5C (ENSIPUG00000004839) glis3 (ENSIPUG00000004952) #22 rfx3 (ENSIPUG00000004967) #23 SMAD4 (ENSIPUG00000005015) BMP10 (ENSIPUG00000005105) npffr1l3 (ENSIPUG00000005114) ENSIPUG00000005136 ENSIPUG00000005174 ENSIPUG00000005182 FAM222A (ENSIPUG00000005199) ENSIPUG00000005207 git2b (ENSIPUG00000005248) ENSIPUG00000005414 srsf9 (ENSIPUG00000005511) triap1 (ENSIPUG00000005532) GAL3ST1 (ENSIPUG00000005551) linc-epb41l4a (ENSIPUG00000005559) Characiphysae_b ANCESTRAL SPECIES 9 ENSGT00940000155464.a.a ENSGT00390000010427.c ENSGT00390000016532 ENSGT00730000112225 ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT00940000158504 ENSGT00940000155292.db.a ENSGT00950000182993.A.b.f ENSGT01100000263502.B.a.b.b ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c.b ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00940000181291 ENSGT00530000063811.B.b ENSGT00940000155182.a ENSGT00940000156383.b.d ENSGT00940000156871.p ENSGT00940000163530 ENSGT00940000156839 ENSGT00950000182923.C.b ENSGT00980000203443 Electric eel MODERN SPECIES 69 dnajb13 (ENSEEEG00000009387) ucp2 (ENSEEEG00000009392) ucp3 (ENSEEEG00000009394) ENSEEEG00000009395 ENSEEEG00000009398 ENSEEEG00000009566 slc1a3b (ENSEEEG00000009570) nipblb (ENSEEEG00000009575) nup155 (ENSEEEG00000009580) ENSEEEG00000009623 WDR70 (ENSEEEG00000009637) gdnfa (ENSEEEG00000009703) pdlim5b (ENSEEEG00000009704) bmpr1bb (ENSEEEG00000009708) UNC5C (ENSEEEG00000009738) glis3 (ENSEEEG00000009748) #22 rfx3 (ENSEEEG00000009754) #23 smad4a (ENSEEEG00000009764) ENSEEEG00000009814 npffr1l3 (ENSEEEG00000009817) ARVCF (ENSEEEG00000009980) ENSEEEG00000009982 ENSEEEG00000009990 FAM222A (ENSEEEG00000009999) ENSEEEG00000010000 git2b (ENSEEEG00000010081) SGSM1 (ENSEEEG00000012226) triap1 (ENSEEEG00000012234) srsf9 (ENSEEEG00000012236) GAL3ST1 (ENSEEEG00000012239) epb41l4a (ENSEEEG00000012240) Characoidei ANCESTRAL SPECIES 78 ENSGT00940000161387 ENSGT00940000155464.a.a ENSGT00390000010427.c ENSGT00390000016532 ENSGT00730000112225 ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT00940000158504 ENSGT00950000182993.A.b.f ENSGT01100000263502.B.a.b.b ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c.b ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00940000181291 ENSGT00530000063811.B.b ENSGT00940000155182.a ENSGT00940000156383.b.d ENSGT00940000156871.p ENSGT00940000163530 ENSGT00940000156839 ENSGT00950000182923.C.b ENSGT00980000203443 Red-bellied piranha MODERN SPECIES 174 gdnfa (ENSPNAG00000020453) EGFLAM (ENSPNAG00000020443) opn4xa (ENSPNAG00000020406) pdlim5b (ENSPNAG00000020177) bmpr1bb (ENSPNAG00000020132) UNC5C (ENSPNAG00000007062) glis3 (ENSPNAG00000019950) #22 rfx3 (ENSPNAG00000019929) #23 smad4a (ENSPNAG00000019854) BMP10 (ENSPNAG00000019783) npffr1l3 (ENSPNAG00000019776) ARVCF (ENSPNAG00000006953) ENSPNAG00000003606 ENSPNAG00000019678 FAM222A (ENSPNAG00000003598) ENSPNAG00000019649 git2b (ENSPNAG00000019596) SGSM1 (ENSPNAG00000019476) triap1 (ENSPNAG00000019320) srsf9 (ENSPNAG00000003588) GAL3ST1 (ENSPNAG00000019295) linc-epb41l4a (ENSPNAG00000019283) Mexicana tetra MODERN SPECIES 12 ENSAMXG00000034583 ENSAMXG00000038184 ENSAMXG00000039562 slc1a3b (ENSAMXG00000000008) nipblb (ENSAMXG00000006890) nup155 (ENSAMXG00000006908) ENSAMXG00000041226 ENSAMXG00000031985 WDR70 (ENSAMXG00000006938) gdnfa (ENSAMXG00000042733) EGFLAM (ENSAMXG00000006956) opn4xa (ENSAMXG00000006974) pdlim5b (ENSAMXG00000034634) bmpr1bb (ENSAMXG00000006998) UNC5C (ENSAMXG00000007025) glis3 (ENSAMXG00000019181) #22 rfx3 (ENSAMXG00000019201) #23 smad4a (ENSAMXG00000019219) BMP10 (ENSAMXG00000034592) npffr1l3 (ENSAMXG00000036599) ENSAMXG00000019223 ENSAMXG00000019228 ANKLE2 (ENSAMXG00000019231) FAM222A (ENSAMXG00000042411) ENSAMXG00000035811 git2b (ENSAMXG00000019239) SGSM1 (ENSAMXG00000019256) triap1 (ENSAMXG00000034513) srsf9 (ENSAMXG00000032281) GAL3ST1 (ENSAMXG00000019276) ENSAMXG00000035119 Cyprinoidei ANCESTRAL SPECIES 137 ENSGT00390000016532 ENSGT00730000112225 ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c.a ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00530000063811.B.b ENSGT00950000183181.B.b.l.a ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00390000008657 ENSGT00390000009554 ENSGT00940000163875.a.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 341 ENSGT01100000263502.B.a.b.a.a ENSGT00940000155292.db.b.d ENSGT00940000155919.b.b.e ENSGT00950000182815.a.a.a.a.a.c.a.b ENSGT00940000156896.a #22 ENSGT01050000244879.a.a.b.a #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b.e ENSGT00940000157027.n.b.f ENSGT00940000158044.b ENSGT00530000063811.B.b.a ENSGT00950000183181.B.b.l.a.e ENSGT01030000234517.F.a ENSGT00940000159359.p ENSGT00940000156765.a.b.f ENSGT00940000157189.c ENSGT00390000008657 ENSGT00390000009554.e Goldfish DUPLICATION Goldfish MODERN SPECIES 599 glis3 (ENSCARG00000043075) #22 rfx3 (ENSCARG00000043039) #23 Goldfish MODERN SPECIES 28 epb41l4a (ENSCARG00000033180) apc (ENSCARG00000035930) C3AR1 (ENSCARG00000036394) ENSCARG00000036397 ENSCARG00000036420 ENSCARG00000036429 ENSCARG00000036438 tdgf1 (ENSCARG00000036444) ENSCARG00000036543 ENSCARG00000040007 ENSCARG00000040249 ENSCARG00000040264 wu:fb59d01 (ENSCARG00000040302) ENSCARG00000040324 ENSCARG00000040600 glis3 (ENSCARG00000040610) #22 rfx3 (ENSCARG00000040635) #23 smad4a (ENSCARG00000040718) ENSCARG00000040828 npffr1l3 (ENSCARG00000040833) BMP10 (ENSCARG00000040845) erg (ENSCARG00000040878) KCNJ15 (ENSCARG00000040897) KCNJ6 (ENSCARG00000040905) ENSCARG00000040934 dyrk1aa (ENSCARG00000040952) HLCS (ENSCARG00000041072) tiprl (ENSCARG00000041090) ENSCARG00000041116 ENSCARG00000041179 ENSCARG00000041198 Cyprininae_a ANCESTRAL SPECIES 492 ENSGT01100000263502.B.a.b.a.a ENSGT00940000155292.db.b.d ENSGT00940000155919.b.b.e ENSGT00950000182815.a.a.a.a.a.c.a.b ENSGT00940000156896.a #22 ENSGT01050000244879.a.a.b.a #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b.e ENSGT00940000157027.n.b.f ENSGT00940000158044.b ENSGT00530000063811.B.b.a ENSGT00950000183181.B.b.l.a.e ENSGT01030000234517.F.a Common carp reference MODERN SPECIES 32 ENSCCRG00000076743 ENSCCRG00000075976 apc (ENSCCRG00000061639) epb41l4a (ENSCCRG00000016643) triap1 (ENSCCRG00000031285) srsf9 (ENSCCRG00000072908) ENSCCRG00000030007 nup155 (ENSCCRG00000006871) ENSCCRG00000009055 ENSCCRG00000067347 ENSCCRG00000009051 opn4xa (ENSCCRG00000009048) pdlim5b (ENSCCRG00000059606) bmpr1bb (ENSCCRG00000008248) UNC5C (ENSCCRG00000076525) glis3 (ENSCCRG00000024813) #22 rfx3 (ENSCCRG00000035878) #23 smad4a (ENSCCRG00000013106) ENSCCRG00000056292 npffr1l3 (ENSCCRG00000016302) ENSCCRG00000035795 ENSCCRG00000058451 ENSCCRG00000075108 ENSCCRG00000064876 ENSCCRG00000080391 ENSCCRG00000072512 vaspa (ENSCCRG00000082689) emsy (ENSCCRG00000009945) ENSCCRG00000018264 ENSCCRG00000014187 mpzl1l (ENSCCRG00000014154) Golden-line barbel MODERN SPECIES 667 opn4xa (ENSSGRG00000036309) pdlim5b (ENSSGRG00000036306) bmpr1bb (ENSSGRG00000035360) UNC5C (ENSSGRG00000034633) glis3 (ENSSGRG00000034612) #22 Cyprininae ANCESTRAL SPECIES 656 ENSGT00940000156839.f ENSGT00940000163530.s.a ENSGT00940000156871.p.a.b ENSGT00390000016532 ENSGT00730000112225.g ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e.b ENSGT01100000263502.B.a.b.a.b ENSGT00940000155292.db.b.c ENSGT00940000155919.b.b.f ENSGT00950000182815.a.a.a.a.a.c.a.a ENSGT00940000156896.b #22 ENSGT01050000244879.a.a.b.b #23 Cyprininae_a ANCESTRAL SPECIES 384 ENSGT00530000063749.c.b.k ENSGT00940000159623.i ENSGT00940000156839.f ENSGT00940000163530.s.a ENSGT00940000156871.p.a.b ENSGT00390000016532 ENSGT00730000112225.g ENSGT00730000112225.h ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e.b ENSGT01100000263502.B.a.b.a.b ENSGT00940000155292.db.b.c ENSGT00940000155919.b.b.f ENSGT00950000182815.a.a.a.a.a.c.a.a ENSGT00940000156896.b #22 ENSGT01050000244879.a.a.b.b #23 Common carp reference MODERN SPECIES 24 ENSCCRG00000069147 ENSCCRG00000031524 srsf9 (ENSCCRG00000060700) ENSCCRG00000062549 nup155 (ENSCCRG00000052714) ENSCCRG00000000412 ENSCCRG00000076193 ENSCCRG00000074117 ENSCCRG00000078953 gdnfa (ENSCCRG00000058888) opn4xa (ENSCCRG00000044217) pdlim5b (ENSCCRG00000008930) bmpr1bb (ENSCCRG00000035315) UNC5C (ENSCCRG00000035330) ENSCCRG00000055442 glis3 (ENSCCRG00000010962) #22 smad4a (ENSCCRG00000024119) ENSCCRG00000024172 rfx3 (ENSCCRG00000021805) #23 npffr1l3 (ENSCCRG00000078439) ENSCCRG00000053115 ENSCCRG00000064426 ENSCCRG00000060351 ENSCCRG00000021475 si:ch1073-303d10.1 (ENSCCRG00000064626) ENSCCRG00000005334 ENSCCRG00000005331 vaspa (ENSCCRG00000079511) akt2l (ENSCCRG00000003577) ENSCCRG00000063205 emsy (ENSCCRG00000014133) Zebrafish MODERN SPECIES 1 apc (ENSDARG00000058868) epb41l4a (ENSDARG00000040087) GAL3ST1 (ENSDARG00000078245) linc-epb41l4a (ENSDARG00000092467) srsf9 (ENSDARG00000008097) triap1 (ENSDARG00000014963) SGSM1 (ENSDARG00000075376) nup155 (ENSDARG00000001777) ENSDARG00000078257 WDR70 (ENSDARG00000109022) gdnfa (ENSDARG00000039959) opn4xa (ENSDARG00000079129) pdlim5b (ENSDARG00000027600) bmpr1bb (ENSDARG00000102742) UNC5C (ENSDARG00000087341) glis3 (ENSDARG00000069726) #22 rfx3 (ENSDARG00000014550) #23 ENSDARG00000110346 smad4a (ENSDARG00000075226) BMP10 (ENSDARG00000109233) npffr1l3 (ENSDARG00000010712) ENSDARG00000095223 ARVCF (ENSDARG00000074329) ENSDARG00000042872 ENSDARG00000087910 FAM222A (ENSDARG00000087585) si:ch1073-303d10.1 (ENSDARG00000103006) ENSDARG00000074914 ENSDARG00000100197 vaspa (ENSDARG00000099690) akt2l (ENSDARG00000103612) Euteleosteomorpha ANCESTRAL SPECIES 89 ENSGT00940000156237 ENSGT00940000156481.a.a.b ENSGT00940000157656.b ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.b.b ENSGT00950000182924.A.b.a.a ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B ENSGT01100000263502.B.a.a.d.b.c.b ENSGT00940000154877.C ENSGT00940000154877.A ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00940000155464.a.a ENSGT00940000161387 ENSGT00390000006320 ENSGT00390000007918 Protacanthopterygii ANCESTRAL SPECIES 77 ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.b.b ENSGT00940000155292.db.b.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c ENSGT00940000155464.a.a ENSGT00940000161387 ENSGT00390000006320 ENSGT00390000007918 ENSGT00940000165259.a ENSGT00970000193642 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 479 ENSGT01100000263502.B.a.b.a.c ENSGT00940000155292.db.b.b.a ENSGT00940000155919.b.b.a ENSGT00950000182815.a.a.a.a.a.c.c ENSGT00940000156896.c #22 ENSGT01050000244879.a.a.b.d #23 ENSGT00940000157435.a.b.l ENSGT00940000156279.f.f ENSGT01070000253744.b.a.a.a.a.g ENSGT00940000157027.n.b.a ENSGT00940000158044.b.d ENSGT00730000112225.f ENSGT00390000016532.j ENSGT00390000010427.c.q.a ENSGT00940000155464.a.a.g ENSGT00940000161387.a ENSGT00390000006320.q ENSGT00390000007918.c ENSGT00390000002096.s.a ENSGT00390000006320.r Salmoninae_a ANCESTRAL SPECIES 87 ENSGT01100000263502.B.a.b.a.c ENSGT00940000155292.db.b.b.a ENSGT00940000155919.b.b.a ENSGT00950000182815.a.a.a.a.a.c.c ENSGT00940000156896.c #22 ENSGT01050000244879.a.a.b.d #23 ENSGT00940000157435.a.b.l ENSGT00940000156279.f.f ENSGT01070000253744.b.a.a.a.a.g ENSGT00940000157027.n.b.a ENSGT00940000158044.b.d ENSGT00730000112225.f ENSGT00390000016532.j ENSGT00390000010427.c.q.a ENSGT00940000155464.a.a.g ENSGT00940000161387.a ENSGT00390000006320.q ENSGT00390000007918.c ENSGT00390000002096.s.a ENSGT00940000165259.a Salmo ANCESTRAL SPECIES 54 ENSGT01100000263502.B.a.b.a.c ENSGT00940000155292.db.b.b.a ENSGT00940000155919.b.b.a ENSGT00950000182815.a.a.a.a.a.c.c ENSGT00940000156896.c #22 ENSGT01050000244879.a.a.b.d #23 ENSGT00940000157435.a.b.l ENSGT00940000156279.f.f ENSGT01070000253744.b.a.a.a.a.g ENSGT00940000157027.n.b.a ENSGT00940000158044.b.d ENSGT00730000112225.f ENSGT00390000016532.j ENSGT00390000010427.c.q.a ENSGT00940000155464.a.a.g ENSGT00940000161387.a ENSGT00390000006320.q ENSGT00390000007918.c ENSGT00390000002096.s.a ENSGT00940000165259.a Atlantic salmon MODERN SPECIES ENSSSAG00000003903 ENSSSAG00000107446 ENSSSAG00000002757 ENSSSAG00000113795 ENSSSAG00000094785 ENSSSAG00000002555 pgam5 (ENSSSAG00000002540) ENSSSAG00000115396 WDR70 (ENSSSAG00000002232) gdnf (ENSSSAG00000002112) EGFLAM (ENSSSAG00000114100) opn4xa (ENSSSAG00000002109) pdlim5b (ENSSSAG00000002083) bmpr1bb (ENSSSAG00000001977) UNC5C (ENSSSAG00000001322) glis3 (ENSSSAG00000001096) #22 rfx3 (ENSSSAG00000000897) #23 smad4a (ENSSSAG00000000795) ENSSSAG00000000757 npffr1l3 (ENSSSAG00000086335) ENSSSAG00000000743 ENSSSAG00000083173 ENSSSAG00000000715 ENSSSAG00000089647 ENSSSAG00000000423 SLC1A3 (ENSSSAG00000000163) RANBP3L (ENSSSAG00000001289) NADK2 (ENSSSAG00000069298) SKP2 (ENSSSAG00000069118) ENSSSAG00000068165 ENSSSAG00000068114 River trout MODERN SPECIES 15 srsf9 (ENSSTUG00000048729) triap1 (ENSSTUG00000048728) ENSSTUG00000048062 git2b (ENSSTUG00000047303) ENSSTUG00000047242 FAM222A (ENSSTUG00000047236) ENSSTUG00000047189 PGAM5 (ENSSTUG00000047186) WDR70 (ENSSTUG00000046890) gdnfa (ENSSTUG00000046858) EGFLAM (ENSSTUG00000046854) opn4xa (ENSSTUG00000046836) pdlim5b (ENSSTUG00000046781) bmpr1bb (ENSSTUG00000046660) UNC5C (ENSSTUG00000043259) glis3 (ENSSTUG00000042999) #22 rfx3 (ENSSTUG00000042197) #23 smad4a (ENSSTUG00000041923) BMP10 (ENSSTUG00000041896) npffr1l3 (ENSSTUG00000041878) ARVCF (ENSSTUG00000041839) ENSSTUG00000041824 ENSSTUG00000041795 nup155 (ENSSTUG00000039855) ENSSTUG00000039642 SLC1A3 (ENSSTUG00000039319) ENSSTUG00000039305 nadk2 (ENSSTUG00000039039) skp2 (ENSSTUG00000039007) ENSSTUG00000038043 ENSSTUG00000037985 Oncorhynchus ANCESTRAL SPECIES 67 ENSGT01100000263502.B.a.b.a.c ENSGT00940000155292.db.b.b.a ENSGT00940000155919.b.b.a ENSGT00950000182815.a.a.a.a.a.c.c ENSGT00940000156896.c #22 ENSGT01050000244879.a.a.b.d #23 ENSGT00940000157435.a.b.l ENSGT00940000156279.f.f ENSGT01070000253744.b.a.a.a.a.g ENSGT00940000157027.n.b.a ENSGT00940000158044.b.d ENSGT00730000112225.f ENSGT00390000016532.j ENSGT00390000010427.c.q.a ENSGT00940000155464.a.a.g ENSGT00940000161387.a ENSGT00390000006320.q ENSGT00390000007918.c ENSGT00390000002096.s.a ENSGT00940000165259.a Oncorhynchus_a ANCESTRAL SPECIES 74 ENSGT01100000263502.B.a.b.a.c ENSGT00940000155292.db.b.b.a ENSGT00940000155919.b.b.a ENSGT00950000182815.a.a.a.a.a.c.c ENSGT00940000156896.c #22 ENSGT01050000244879.a.a.b.d #23 ENSGT00940000157435.a.b.l ENSGT00940000156279.f.f ENSGT01070000253744.b.a.a.a.a.g ENSGT00940000157027.n.b.a ENSGT00940000158044.b.d ENSGT00730000112225.f ENSGT00390000016532.j ENSGT00390000010427.c.q.a ENSGT00940000155464.a.a.g ENSGT00940000161387.a ENSGT00390000006320.q ENSGT00390000007918.c ENSGT00390000002096.s.a ENSGT00940000165259.a Chinook salmon MODERN SPECIES 12 srsf9 (ENSOTSG00005037251) triap1 (ENSOTSG00005037252) ENSOTSG00005037265 git2b (ENSOTSG00005037644) FAM222A (ENSOTSG00005038150) ENSOTSG00005038153 PGAM5 (ENSOTSG00005038156) ENSOTSG00005038158 WDR70 (ENSOTSG00005038161) gdnfa (ENSOTSG00005038314) EGFLAM (ENSOTSG00005038318) opn4xa (ENSOTSG00005038325) pdlim5b (ENSOTSG00005038329) bmpr1bb (ENSOTSG00005038334) UNC5C (ENSOTSG00005038352) glis3 (ENSOTSG00005042613) #22 rfx3 (ENSOTSG00005042621) #23 smad4a (ENSOTSG00005042678) BMP10 (ENSOTSG00005042742) npffr1l3 (ENSOTSG00005042744) ARVCF (ENSOTSG00005042886) ENSOTSG00005042888 ENSOTSG00005042889 nup155 (ENSOTSG00005042895) ENSOTSG00005042935 SLC1A3 (ENSOTSG00005042980) RANBP3L (ENSOTSG00005043005) nadk2 (ENSOTSG00005043007) skp2 (ENSOTSG00005043011) ENSOTSG00005043012 ENSOTSG00005043015 Coho salmon MODERN SPECIES 15 ENSOKIG00005032880 git2b (ENSOKIG00005025913) ENSOKIG00005025600 FAM222A (ENSOKIG00005025590) ANKLE2 (ENSOKIG00005025533) PGAM5 (ENSOKIG00005025522) ENSOKIG00005025511 WDR70 (ENSOKIG00005025420) gdnfa (ENSOKIG00005025394) EGFLAM (ENSOKIG00005025368) opn4xa (ENSOKIG00005025331) ENSOKIG00005025319 pdlim5b (ENSOKIG00005025261) bmpr1bb (ENSOKIG00005024956) UNC5C (ENSOKIG00005022294) glis3 (ENSOKIG00005022187) #22 rfx3 (ENSOKIG00005021336) #23 smad4a (ENSOKIG00005021114) BMP10 (ENSOKIG00005021094) npffr1l3 (ENSOKIG00005021089) ARVCF (ENSOKIG00005020840) ENSOKIG00005020799 ENSOKIG00005020783 nup155 (ENSOKIG00005020587) ENSOKIG00005020398 SLC1A3 (ENSOKIG00005020166) ENSOKIG00005020130 NADK2 (ENSOKIG00005020080) ENSOKIG00005019937 ENSOKIG00005019847 cfap53 (ENSOKIG00005019831) Rainbow trout MODERN SPECIES 26 ENSOMYG00000037562 ENSOMYG00000044329 ENSOMYG00000044332 ENSOMYG00000044335 ENSOMYG00000044341 WDR70 (ENSOMYG00000044352) ENSOMYG00000053593 gdnfa (ENSOMYG00000023974) EGFLAM (ENSOMYG00000024067) opn4xa (ENSOMYG00000024137) ENSOMYG00000071736 pdlim5b (ENSOMYG00000024242) ENSOMYG00000052908 bmpr1bb (ENSOMYG00000024378) UNC5C (ENSOMYG00000024830) glis3 (ENSOMYG00000025428) #22 rfx3 (ENSOMYG00000025811) #23 smad4a (ENSOMYG00000027201) ENSOMYG00000056672 npffr1l3 (ENSOMYG00000064507) ENSOMYG00000027312 ENSOMYG00000027345 ENSOMYG00000027761 ENSOMYG00000028750 SLC1A3 (ENSOMYG00000029087) ENSOMYG00000058433 ENSOMYG00000029237 SKP2 (ENSOMYG00000029285) ENSOMYG00000029426 ENSOMYG00000061263 ENSOMYG00000029474 Huchen MODERN SPECIES 336 glis3 (ENSHHUG00000040396) #22 rfx3 (ENSHHUG00000040281) #23 smad4a (ENSHHUG00000040209) BMP10 (ENSHHUG00000040205) npffr1l3 (ENSHHUG00000040093) ARVCF (ENSHHUG00000040085) ENSHHUG00000040073 nup155 (ENSHHUG00000040054) ENSHHUG00000039753 SLC1A3 (ENSHHUG00000039718) ENSHHUG00000039713 nadk2 (ENSHHUG00000039657) skp2 (ENSHHUG00000039623) ENSHHUG00000039501 cfap53 (ENSHHUG00000039484) myo5b (ENSHHUG00000037123) Salmoninae ANCESTRAL SPECIES 407 ENSGT00950000182923.C.b ENSGT00940000156839.j.a.a.b ENSGT00940000163530.k.b ENSGT00940000156871.p.c ENSGT00940000156383.b.a ENSGT00940000155182.a.c ENSGT00530000063811.B.b.c ENSGT00390000016767.r.b ENSGT00390000004796.d.b ENSGT00390000015433.g.a.a ENSGT00950000182993.A.b.e.d ENSGT01100000263502.B.a.b.a.d ENSGT00940000155292.db.b.b.b ENSGT00940000155919.b.b.b ENSGT00950000182815.a.a.a.a.a.c.d ENSGT00940000156896.d #22 ENSGT01050000244879.a.a.b.c #23 ENSGT00940000157435.a.b.k ENSGT00940000156279.f.e ENSGT01070000253744.b.a.a.a.a.h ENSGT00940000157027.n.b.b ENSGT00940000158044.b.c ENSGT00730000112225.e ENSGT00390000016532.k ENSGT00390000010427.c.q.b ENSGT00940000155464.a.a.h ENSGT00940000161387.b Huchen MODERN SPECIES 1080 ENSHHUG00000021217 glis3 (ENSHHUG00000021162) #22 rfx3 (ENSHHUG00000021086) #23 smad4a (ENSHHUG00000020905) BMP10 (ENSHHUG00000020900) npffr1l3 (ENSHHUG00000020821) ARVCF (ENSHHUG00000020789) ENSHHUG00000020776 ENSHHUG00000020744 nup155 (ENSHHUG00000020176) ENSHHUG00000020151 ENSHHUG00000020137 SLC1A3 (ENSHHUG00000020089) RANBP3L (ENSHHUG00000020077) ENSHHUG00000020054 skp2 (ENSHHUG00000019999) ENSHHUG00000019842 Salmoninae_a ANCESTRAL SPECIES 24 ENSGT00950000182923.C.b ENSGT00940000156839.j.a.a.b ENSGT00940000163530.k.b ENSGT00940000156871.p.c ENSGT00940000156383.b.a ENSGT00940000155182.a.c ENSGT00530000063811.B.b.c ENSGT00390000016767.r.b ENSGT00390000004796.d.b ENSGT00390000015433.g.a.a ENSGT00950000182993.A.b.e.d ENSGT01100000263502.B.a.b.a.d ENSGT00940000155292.db.b.b.b ENSGT00940000155919.b.b.b ENSGT00950000182815.a.a.a.a.a.c.d ENSGT00940000156896.d #22 ENSGT01050000244879.a.a.b.c #23 ENSGT00940000157435.a.b.k ENSGT00940000156279.f.e ENSGT01070000253744.b.a.a.a.a.h ENSGT00940000157027.n.b.b ENSGT00940000158044.b.c ENSGT00730000112225.e ENSGT00390000016532.k ENSGT00390000010427.c.q.b ENSGT00940000155464.a.a.h ENSGT00940000161387.b ENSGT00390000006320.r ENSGT00390000007918.d ENSGT00390000002096.s.b ENSGT00940000155402.a.b.h Oncorhynchus ANCESTRAL SPECIES 21 ENSGT00950000183101.b.b.b ENSGT00390000006265.b.c.e ENSGT00940000160711.h.a ENSGT00950000182923.C.b ENSGT00940000156839.j.a.a.b ENSGT00940000163530.k.b ENSGT00940000156871.p.c ENSGT00940000156383.b.a ENSGT00940000155182.a.c ENSGT00530000063811.B.b.c ENSGT00950000182993.A.b.e.d ENSGT01100000263502.B.a.b.a.d ENSGT00940000155292.db.b.b.b ENSGT00940000155919.b.b.b ENSGT00950000182815.a.a.a.a.a.c.d ENSGT00940000156896.d #22 ENSGT01050000244879.a.a.b.c #23 ENSGT00940000157435.a.b.k ENSGT00940000156279.f.e ENSGT01070000253744.b.a.a.a.a.h ENSGT00940000157027.n.b.b ENSGT00940000158044.b.c ENSGT00730000112225.e ENSGT00390000016532.k ENSGT00390000010427.c.q.b ENSGT00940000155464.a.a.h ENSGT00940000161387.b ENSGT00390000006320.r ENSGT00390000007918.d ENSGT00390000002096.s.b ENSGT00940000155402.a.b.h Oncorhynchus_a ANCESTRAL SPECIES 19 ENSGT00950000183101.b.b.b ENSGT00390000006265.b.c.e ENSGT00940000160711.h.a ENSGT00950000182923.C.b ENSGT00940000156839.j.a.a.b ENSGT00940000163530.k.b ENSGT00940000156871.p.c ENSGT00940000156383.b.a ENSGT00940000155182.a.c ENSGT00530000063811.B.b.c ENSGT00950000182993.A.b.e.d ENSGT01100000263502.B.a.b.a.d ENSGT00940000155292.db.b.b.b ENSGT00940000155919.b.b.b ENSGT00950000182815.a.a.a.a.a.c.d ENSGT00940000156896.d #22 ENSGT01050000244879.a.a.b.c #23 ENSGT00940000157435.a.b.k ENSGT00940000156279.f.e ENSGT01070000253744.b.a.a.a.a.h ENSGT00940000157027.n.b.b ENSGT00940000158044.b.c ENSGT00730000112225.e ENSGT00390000016532.k ENSGT00390000010427.c.q.b ENSGT00940000155464.a.a.h ENSGT00940000161387.b ENSGT00390000006320.r ENSGT00390000007918.d ENSGT00390000002096.s.b ENSGT00940000155402.a.b.h Coho salmon MODERN SPECIES 26 ENSOKIG00005001159 ENSOKIG00005001156 ENSOKIG00005001152 GAL3ST1 (ENSOKIG00005001146) srsf9 (ENSOKIG00005001135) ENSOKIG00005001127 ENSOKIG00005001029 ENSOKIG00005000729 ENSOKIG00005000617 FAM222A (ENSOKIG00005000613) gdnfa (ENSOKIG00005000606) opn4xa (ENSOKIG00005000598) pdlim5b (ENSOKIG00005000574) bmpr1bb (ENSOKIG00005000475) UNC5C (ENSOKIG00005000358) glis3 (ENSOKIG00005000292) #22 rfx3 (ENSOKIG00005000211) #23 smad4a (ENSOKIG00005023370) BMP10 (ENSOKIG00005023344) npffr1l3 (ENSOKIG00005022916) ARVCF (ENSOKIG00005022603) ENSOKIG00005022380 ENSOKIG00005022343 ENSOKIG00005021324 SLC1A3 (ENSOKIG00005021263) RANBP3L (ENSOKIG00005021233) nadk2 (ENSOKIG00005021162) skp2 (ENSOKIG00005021126) ENSOKIG00005020959 ENSOKIG00005020916 myo5b (ENSOKIG00005020119) Chinook salmon MODERN SPECIES 33 ENSOTSG00005038394 RTN4R (ENSOTSG00005038385) ENSOTSG00005038382 GAL3ST1 (ENSOTSG00005038381) srsf9 (ENSOTSG00005038378) triap1 (ENSOTSG00005038376) ENSOTSG00005034424 git2b (ENSOTSG00005026144) ENSOTSG00005026116 FAM222A (ENSOTSG00005026115) ENSOTSG00005026113 gdnfa (ENSOTSG00005026112) opn4xa (ENSOTSG00005026111) ENSOTSG00005026110 ENSOTSG00005026107 glis3 (ENSOTSG00005026106) #22 rfx3 (ENSOTSG00005025481) #23 smad4a (ENSOTSG00005025465) BMP10 (ENSOTSG00005025463) npffr1l3 (ENSOTSG00005025462) ARVCF (ENSOTSG00005025448) ENSOTSG00005025444 ENSOTSG00005025441 nup155 (ENSOTSG00005025431) ENSOTSG00005025366 SLC1A3 (ENSOTSG00005025217) RANBP3L (ENSOTSG00005025207) skp2 (ENSOTSG00005025201) ENSOTSG00005024755 myo5b (ENSOTSG00005003595) ENSOTSG00005003363 Rainbow trout MODERN SPECIES 3 ENSOMYG00000066280 srsf9 (ENSOMYG00000033438) ENSOMYG00000033423 ENSOMYG00000030717 ENSOMYG00000052206 ENSOMYG00000029158 gltp (ENSOMYG00000028810) ENSOMYG00000028796 gdnfa (ENSOMYG00000028767) opn4xa (ENSOMYG00000028749) pdlim5b (ENSOMYG00000028740) bmpr1bb (ENSOMYG00000065864) ENSOMYG00000070326 ENSOMYG00000050431 UNC5C (ENSOMYG00000028666) glis3 (ENSOMYG00000028581) #22 ENSOMYG00000028573 ENSOMYG00000028571 ENSOMYG00000053960 rfx3 (ENSOMYG00000028433) #23 smad4a (ENSOMYG00000028296) ENSOMYG00000028251 npffr1l3 (ENSOMYG00000028242) ENSOMYG00000070897 ENSOMYG00000028059 ENSOMYG00000027986 ENSOMYG00000027976 ENSOMYG00000049772 ENSOMYG00000027674 SLC1A3 (ENSOMYG00000061009) RANBP3L (ENSOMYG00000027601) Salmo ANCESTRAL SPECIES 13 ENSGT00940000163530.l.a ENSGT00940000156839.j.a.b ENSGT00940000163530.k.b ENSGT00940000156871.p.c ENSGT00940000156383.b.a ENSGT00940000155182.a.c ENSGT00530000063811.B.b.c ENSGT00390000016767.r.b ENSGT00390000004796.d.b ENSGT00390000015433.g.a.a ENSGT00950000182993.A.b.e.d ENSGT01100000263502.B.a.b.a.d ENSGT00940000155292.db.b.b.b ENSGT00940000155919.b.b.b ENSGT00950000182815.a.a.a.a.a.c.d ENSGT00940000156896.d #22 ENSGT01050000244879.a.a.b.c #23 ENSGT00940000157435.a.b.k ENSGT00940000156279.f.e ENSGT01070000253744.b.a.a.a.a.h ENSGT00940000157027.n.b.b ENSGT00940000158044.b.c ENSGT00730000112225.e ENSGT00390000016532.k ENSGT00390000010427.c.q.b ENSGT00940000155464.a.a.h ENSGT00940000161387.b ENSGT00390000006320.r ENSGT00390000007918.d ENSGT00390000002096.s.b ENSGT00940000155402.a.b.h Atlantic salmon MODERN SPECIES 4 srsf9 (ENSSSAG00000080065) ENSSSAG00000083144 ENSSSAG00000119571 ENSSSAG00000006783 ENSSSAG00000010075 ENSSSAG00000054301 ENSSSAG00000087649 ENSSSAG00000054309 ENSSSAG00000054318 ENSSSAG00000093882 gdnfa (ENSSSAG00000098062) opn4xa (ENSSSAG00000054324) pdlim5b (ENSSSAG00000054329) bmpr1bb (ENSSSAG00000054353) UNC5C (ENSSSAG00000055545) glis3 (ENSSSAG00000057357) #22 rfx3 (ENSSSAG00000057457) #23 smad4a (ENSSSAG00000062684) ENSSSAG00000100713 npffr1l3 (ENSSSAG00000000750) ENSSSAG00000063454 ENSSSAG00000100999 ENSSSAG00000095093 ENSSSAG00000107554 ENSSSAG00000063799 ENSSSAG00000068186 SLC1A3 (ENSSSAG00000068621) RANBP3L (ENSSSAG00000068697) NADK2 (ENSSSAG00000068701) SKP2 (ENSSSAG00000068716) ENSSSAG00000068795 River trout MODERN SPECIES 6 ENSSTUG00000005316 GAL3ST1 (ENSSTUG00000005322) srsf9 (ENSSTUG00000005329) triap1 (ENSSTUG00000005359) ENSSTUG00000005472 git2b (ENSSTUG00000007930) ENSSTUG00000011640 FAM222A (ENSSTUG00000011650) ENSSTUG00000011655 PGAM5 (ENSSTUG00000011683) gdnfa (ENSSTUG00000011702) opn4xa (ENSSTUG00000011711) pdlim5b (ENSSTUG00000011721) bmpr1bb (ENSSTUG00000011743) UNC5C (ENSSTUG00000012118) glis3 (ENSSTUG00000014854) #22 rfx3 (ENSSTUG00000014922) #23 smad4a (ENSSTUG00000015304) BMP10 (ENSSTUG00000015382) npffr1l3 (ENSSTUG00000015389) ENSSTUG00000015535 ARVCF (ENSSTUG00000015545) ENSSTUG00000015553 ENSSTUG00000015561 ENSSTUG00000015565 ENSSTUG00000015590 nup155 (ENSSTUG00000015735) SLC1A3 (ENSSTUG00000019871) RANBP3L (ENSSTUG00000020202) nadk2 (ENSSTUG00000020232) skp2 (ENSSTUG00000020264) Northern pike MODERN SPECIES 13 git2b (ENSELUG00000021986) ENSELUG00000022023 FAM222A (ENSELUG00000022046) ENSELUG00000022033 ENSELUG00000022120 PGAM5 (ENSELUG00000022185) ENSELUG00000030270 ENSELUG00000022587 ENSELUG00000034272 WDR70 (ENSELUG00000022635) gdnfa (ENSELUG00000022651) opn4xa (ENSELUG00000022879) pdlim5b (ENSELUG00000023053) bmpr1bb (ENSELUG00000023104) UNC5C (ENSELUG00000023194) glis3 (ENSELUG00000023233) #22 rfx3 (ENSELUG00000023330) #23 smad4a (ENSELUG00000023358) BMP10 (ENSELUG00000023371) npffr1l3 (ENSELUG00000023384) ARVCF (ENSELUG00000023403) ENSELUG00000023427 ENSELUG00000023445 nup155 (ENSELUG00000023540) ENSELUG00000023664 SLC1A3 (ENSELUG00000023711) RANBP3L (ENSELUG00000023720) nadk2 (ENSELUG00000023791) skp2 (ENSELUG00000023797) ENSELUG00000023909 ENSELUG00000034220 Acanthomorphata ANCESTRAL SPECIES 33 ENSGT00950000183101.b.b ENSGT00390000006265.b.c ENSGT00950000182923.C.b ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00730000111276 Percomorphaceae ANCESTRAL SPECIES 16 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B Ovalentaria ANCESTRAL SPECIES 16 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00390000010427.c.s.a ENSGT00940000175928 ENSGT00970000194241 ENSGT00390000010427.c.s.b ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00390000010427.c.s.a ENSGT00940000175928 ENSGT00970000194241 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00940000175928 ENSGT00970000194241 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 Aplocheiloidei ANCESTRAL SPECIES 5 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B Mangrove rivulus MODERN SPECIES 279 opn4xa (ENSKMAG00000010258) pdlim5b (ENSKMAG00000010235) bmpr1bb (ENSKMAG00000010188) UNC5C (ENSKMAG00000010058) glis3 (ENSKMAG00000010008) #22 rfx3 (ENSKMAG00000009937) #23 smad4a (ENSKMAG00000009868) BMP10 (ENSKMAG00000009843) ARVCF (ENSKMAG00000009822) ENSKMAG00000009807 ENSKMAG00000009797 nup155 (ENSKMAG00000009667) tmem141 (ENSKMAG00000009630) SAPCD2 (ENSKMAG00000009594) ENSKMAG00000009563 ENSKMAG00000009513 PAX8 (ENSKMAG00000009439) Turquoise killifish MODERN SPECIES 1611 ENSNFUG00015009075 SRSF9 (ENSNFUG00015009592) SGSM1 (ENSNFUG00015009644) git2b (ENSNFUG00015009948) GLTPB (ENSNFUG00015010193) FAM222A (ENSNFUG00015010202) ENSNFUG00015010214 WDR70 (ENSNFUG00015010238) GDNFA (ENSNFUG00015010259) opn4xa (ENSNFUG00015010269) ENSNFUG00015010313 ENSNFUG00015010321 bmpr1bb (ENSNFUG00015010344) UNC5C (ENSNFUG00015010709) ENSNFUG00015015101 glis3 (ENSNFUG00015015108) #22 ENSNFUG00015015164 RFX3 (ENSNFUG00015015183) #23 smad4a (ENSNFUG00015015586) BMP10 (ENSNFUG00015015646) ARVCFA (ENSNFUG00015015668) ENSNFUG00015015853 ENSNFUG00015015867 nup155 (ENSNFUG00015015876) ENSNFUG00015015999 ENSNFUG00015016110 ENSNFUG00015016114 ENSNFUG00015016134 UHRF2 (ENSNFUG00015016249) oaz1b (ENSNFUG00015018922) ENSNFUG00015018925 Cyprinodontoidei ANCESTRAL SPECIES 16 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00940000175928 ENSGT00970000194241 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 Poeciliinae ANCESTRAL SPECIES 12 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B Poecilia ANCESTRAL SPECIES 12 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B NAME_6 ANCESTRAL SPECIES 12 ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b.c ENSGT00940000155919.b.b.d ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B Sailfin molly MODERN SPECIES 103 glis3 (ENSPLAG00000005185) #22 rfx3 (ENSPLAG00000005171) #23 smad4a (ENSPLAG00000005111) BMP10 (ENSPLAG00000005066) ARVCF (ENSPLAG00000005050) ENSPLAG00000004969 ENSPLAG00000004947 nup155 (ENSPLAG00000004934) ENSPLAG00000004889 ENSPLAG00000004867 ENSPLAG00000004795 UHRF2 (ENSPLAG00000004783) oaz1b (ENSPLAG00000004747) ERMP1 (ENSPLAG00000004733) #8 RIC1 (ENSPLAG00000004669) #9 exosc2 (ENSPLAG00000004605) Amazon molly MODERN SPECIES 258 GAL3ST1 (ENSPFOG00000019790) ENSPFOG00000019791 srsf9 (ENSPFOG00000019792) ENSPFOG00000019793 git2b (ENSPFOG00000019794) ENSPFOG00000019795 FAM222A (ENSPFOG00000019796) ENSPFOG00000019797 WDR70 (ENSPFOG00000019798) gdnfa (ENSPFOG00000019799) opn4xa (ENSPFOG00000019800) pdlim5b (ENSPFOG00000019801) bmpr1bb (ENSPFOG00000019802) bmpr1bb (ENSPFOG00000019803) UNC5C (ENSPFOG00000019804) glis3 (ENSPFOG00000019805) #22 rfx3 (ENSPFOG00000019806) #23 smad4a (ENSPFOG00000019807) BMP10 (ENSPFOG00000019808) ARVCF (ENSPFOG00000019809) ENSPFOG00000019810 ENSPFOG00000019953 nup155 (ENSPFOG00000019811) ENSPFOG00000019812 MLANA (ENSPFOG00000019813) KIAA2026 (ENSPFOG00000019814) UHRF2 (ENSPFOG00000019815) oaz1b (ENSPFOG00000019816) ERMP1 (ENSPFOG00000019817) #8 RIC1 (ENSPFOG00000019818) #9 exosc2 (ENSPFOG00000019819) Guppy MODERN SPECIES 442 uqcr10 (ENSPREG00000012993) GAL3ST1 (ENSPREG00000013000) ENSPREG00000013032 srsf9 (ENSPREG00000013165) ENSPREG00000013232 git2b (ENSPREG00000013392) ENSPREG00000013457 FAM222A (ENSPREG00000013472) ENSPREG00000013485 WDR70 (ENSPREG00000013539) gdnfa (ENSPREG00000013564) opn4xa (ENSPREG00000013581) pdlim5b (ENSPREG00000013658) bmpr1bb (ENSPREG00000013685) UNC5C (ENSPREG00000013711) glis3 (ENSPREG00000013743) #22 rfx3 (ENSPREG00000013770) #23 smad4a (ENSPREG00000013851) BMP10 (ENSPREG00000013876) ARVCF (ENSPREG00000013892) ENSPREG00000013920 ENSPREG00000013943 nup155 (ENSPREG00000013997) ENSPREG00000014046 ENSPREG00000014052 ENSPREG00000014082 ENSPREG00000014165 ENSPREG00000014220 oaz1b (ENSPREG00000014246) ERMP1 (ENSPREG00000014257) #8 RIC1 (ENSPREG00000014275) #9 Platyfish MODERN SPECIES 22 zmat5 (ENSXMAG00000001402) uqcr10 (ENSXMAG00000001412) GAL3ST1 (ENSXMAG00000001414) ENSXMAG00000001415 srsf9 (ENSXMAG00000001438) ENSXMAG00000001453 git2b (ENSXMAG00000001494) ENSXMAG00000001549 FAM222A (ENSXMAG00000001561) WDR70 (ENSXMAG00000001567) gdnfa (ENSXMAG00000021439) opn4xa (ENSXMAG00000001613) pdlim5b (ENSXMAG00000001628) bmpr1bb (ENSXMAG00000001635) UNC5C (ENSXMAG00000001669) glis3 (ENSXMAG00000005013) #22 rfx3 (ENSXMAG00000005015) #23 smad4a (ENSXMAG00000005051) BMP10 (ENSXMAG00000005068) ARVCF (ENSXMAG00000005070) ENSXMAG00000025194 ENSXMAG00000020021 nup155 (ENSXMAG00000005080) ENSXMAG00000030005 ENSXMAG00000005119 ENSXMAG00000005171 ENSXMAG00000005170 UHRF2 (ENSXMAG00000005174) oaz1b (ENSXMAG00000028044) ERMP1 (ENSXMAG00000005226) #8 RIC1 (ENSXMAG00000005243) #9 NAME_4 ANCESTRAL SPECIES ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00940000175928 ENSGT00970000194241 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 Mummichog MODERN SPECIES 2260 uqcr10 (ENSFHEG00000020868) GAL3ST1 (ENSFHEG00000020865) srsf9 (ENSFHEG00000020851) ENSFHEG00000020803 git2b (ENSFHEG00000020748) ENSFHEG00000020695 FAM222A (ENSFHEG00000020669) ENSFHEG00000020660 WDR70 (ENSFHEG00000020484) gdnfa (ENSFHEG00000020391) opn4xa (ENSFHEG00000020381) pdlim5b (ENSFHEG00000020331) bmpr1bb (ENSFHEG00000020318) ENSFHEG00000020268 UNC5C (ENSFHEG00000020244) glis3 (ENSFHEG00000020137) #22 rfx3 (ENSFHEG00000020129) #23 smad4a (ENSFHEG00000020053) BMP10 (ENSFHEG00000019628) ARVCF (ENSFHEG00000019614) ENSFHEG00000019571 ENSFHEG00000019556 nup155 (ENSFHEG00000019546) ENSFHEG00000019424 ENSFHEG00000018991 ENSFHEG00000018962 UHRF2 (ENSFHEG00000018882) oaz1b (ENSFHEG00000018867) ERMP1 (ENSFHEG00000018835) #8 RIC1 (ENSFHEG00000018706) #9 exosc2 (ENSFHEG00000018571) Oryzias ANCESTRAL SPECIES 9 ENSGT00390000009869 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00390000010427.c.s.a ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Oryzias_b ANCESTRAL SPECIES 4 ENSGT00390000009869 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00390000010427.c.s.a ENSGT00970000194241 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 Indian medaka MODERN SPECIES 30 zmat5 (ENSOMEG00000002536) uqcr10 (ENSOMEG00000002543) GAL3ST1 (ENSOMEG00000002547) ENSOMEG00000002593 srsf9 (ENSOMEG00000002601) ENSOMEG00000002630 git2b (ENSOMEG00000002699) ENSOMEG00000002721 FAM222A (ENSOMEG00000002728) WDR70 (ENSOMEG00000002766) gdnfa (ENSOMEG00000002782) opn4xa (ENSOMEG00000002798) pdlim5b (ENSOMEG00000000058) bmpr1bb (ENSOMEG00000002834) UNC5C (ENSOMEG00000002886) glis3 (ENSOMEG00000002935) #22 smad4a (ENSOMEG00000002982) BMP10 (ENSOMEG00000002990) rfx3 (ENSOMEG00000003021) #23 ARVCF (ENSOMEG00000003081) ENSOMEG00000000956 ENSOMEG00000003115 nup155 (ENSOMEG00000003206) ENSOMEG00000003253 ENSOMEG00000003269 ENSOMEG00000003288 ENSOMEG00000003312 UHRF2 (ENSOMEG00000003365) oaz1b (ENSOMEG00000003395) ERMP1 (ENSOMEG00000003427) #8 RIC1 (ENSOMEG00000003478) #9 Javanese ricefish MODERN SPECIES 3 zmat5 (ENSOJAG00000020504) uqcr10 (ENSOJAG00000020509) GAL3ST1 (ENSOJAG00000020515) ENSOJAG00000020522 srsf9 (ENSOJAG00000020545) ENSOJAG00000020589 git2b (ENSOJAG00000001875) ENSOJAG00000002247 FAM222A (ENSOJAG00000002267) WDR70 (ENSOJAG00000002290) gdnfa (ENSOJAG00000002333) opn4xa (ENSOJAG00000002350) pdlim5b (ENSOJAG00000002386) bmpr1bb (ENSOJAG00000002422) UNC5C (ENSOJAG00000002794) glis3 (ENSOJAG00000004227) #22 rfx3 (ENSOJAG00000004283) #23 smad4a (ENSOJAG00000004544) BMP10 (ENSOJAG00000004699) ENSOJAG00000004903 ENSOJAG00000004961 MLANA (ENSOJAG00000005239) KIAA2026 (ENSOJAG00000005246) UHRF2 (ENSOJAG00000005315) oaz1b (ENSOJAG00000005802) ERMP1 (ENSOJAG00000005824) #8 RIC1 (ENSOJAG00000005894) #9 exosc2 (ENSOJAG00000005986) ABL1 (ENSOJAG00000006145) rab14 (ENSOJAG00000006196) ddx54 (ENSOJAG00000006259) Oryzias_a ANCESTRAL SPECIES 12 ENSGT00390000009869 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B Japanese Medaka HdrR MODERN SPECIES 3 uqcr10 (ENSORLG00000025372) ENSORLG00000008121 ENSORLG00000030067 ENSORLG00000008119 srsf9 (ENSORLG00000023709) ENSORLG00000008100 git2b (ENSORLG00000008075) ENSORLG00000007931 ENSORLG00000007923 WDR70 (ENSORLG00000007897) gdnfa (ENSORLG00000007873) opn4xa (ENSORLG00000007864) pdlim5b (ENSORLG00000007854) bmpr1bb (ENSORLG00000007833) UNC5C (ENSORLG00000007815) glis3 (ENSORLG00000007755) #22 rfx3 (ENSORLG00000007747) #23 smad4a (ENSORLG00000007703) ENSORLG00000022833 ARVCF (ENSORLG00000007658) ENSORLG00000007651 ENSORLG00000028358 nup155 (ENSORLG00000007635) ENSORLG00000007606 MLANA (ENSORLG00000007559) ENSORLG00000026627 oaz1b (ENSORLG00000007502) UHRF2 (ENSORLG00000007546) ERMP1 (ENSORLG00000007495) #8 RIC1 (ENSORLG00000007468) #9 exosc2 (ENSORLG00000007443) Chinese medaka MODERN SPECIES 489 glis3 (ENSOSIG00000006026) #22 rfx3 (ENSOSIG00000005600) #23 smad4a (ENSOSIG00000005505) BMP10 (ENSOSIG00000005497) ENSOSIG00000005495 ENSOSIG00000005494 ENSOSIG00000003125 ENSOSIG00000003071 UHRF2 (ENSOSIG00000002953) oaz1b (ENSOSIG00000002866) ERMP1 (ENSOSIG00000002812) #8 RIC1 (ENSOSIG00000000883) #9 exosc2 (ENSOSIG00000000805) ABL1 (ENSOSIG00000000316) rab14 (ENSOSIG00000000271) ddx54 (ENSOSIG00000000192) Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00940000176177 ENSGT00390000010427.c.s.b ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 Cichlidae ANCESTRAL SPECIES 10 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000010427.c.s.b ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000010427.c.s.b ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000010427.c.s.b ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Haplochromini ANCESTRAL SPECIES ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000010427.c.s.b ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00390000009869 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000010427.c.s.b ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 P. nyererei MODERN SPECIES 358 uqcr10 (ENSPNYG00000008762) GAL3ST1 (ENSPNYG00000008730) ENSPNYG00000008675 srsf9 (ENSPNYG00000008644) ENSPNYG00000008582 git2b (ENSPNYG00000008528) ENSPNYG00000008489 FAM222A (ENSPNYG00000008477) ENSPNYG00000008462 WDR70 (ENSPNYG00000008394) gdnfa (ENSPNYG00000008369) opn4xa (ENSPNYG00000008343) pdlim5b (ENSPNYG00000008318) bmpr1bb (ENSPNYG00000008280) UNC5C (ENSPNYG00000008247) glis3 (ENSPNYG00000008203) #22 rfx3 (ENSPNYG00000008150) #23 smad4a (ENSPNYG00000008130) BMP10 (ENSPNYG00000008119) ARVCF (ENSPNYG00000008095) ENSPNYG00000008059 ENSPNYG00000008044 nup155 (ENSPNYG00000007870) ENSPNYG00000007841 ENSPNYG00000007727 ENSPNYG00000007687 UHRF2 (ENSPNYG00000007607) oaz1b (ENSPNYG00000007528) ERMP1 (ENSPNYG00000007487) #8 RIC1 (ENSPNYG00000007422) #9 exosc2 (ENSPNYG00000007383) Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00390000009869 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000010427.c.s.a ENSGT00390000010427.c.s.b ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Eastern happy MODERN SPECIES 19 GAL3ST1 (ENSACLG00000015784) ENSACLG00000015718 srsf9 (ENSACLG00000015678) ENSACLG00000015650 ENSACLG00000015487 git2b (ENSACLG00000015302) ENSACLG00000015281 FAM222A (ENSACLG00000015267) WDR70 (ENSACLG00000015123) gdnfa (ENSACLG00000015113) opn4xa (ENSACLG00000015094) pdlim5b (ENSACLG00000015010) bmpr1bb (ENSACLG00000014953) ENSACLG00000014947 UNC5C (ENSACLG00000014816) glis3 (ENSACLG00000014654) #22 rfx3 (ENSACLG00000014557) #23 smad4a (ENSACLG00000014529) BMP10 (ENSACLG00000014520) ARVCF (ENSACLG00000014514) ENSACLG00000014347 ENSACLG00000014341 nup155 (ENSACLG00000014123) ENSACLG00000014104 ENSACLG00000013956 MLANA (ENSACLG00000013936) ENSACLG00000013855 UHRF2 (ENSACLG00000013761) oaz1b (ENSACLG00000013736) ERMP1 (ENSACLG00000013682) #8 ENSACLG00000013674 Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005018418 srsf9 (ENSMZEG00005018422) ENSMZEG00005018428 git2b (ENSMZEG00005018442) ENSMZEG00005018458 FAM222A (ENSMZEG00005018465) WDR70 (ENSMZEG00005018480) gdnfa (ENSMZEG00005018503) ENSMZEG00005018505 ENSMZEG00005018511 ENSMZEG00005018533 opn4xa (ENSMZEG00005018537) pdlim5b (ENSMZEG00005018544) bmpr1bb (ENSMZEG00005018554) UNC5C (ENSMZEG00005018566) glis3 (ENSMZEG00005018592) #22 rfx3 (ENSMZEG00005018598) #23 smad4a (ENSMZEG00005018613) BMP10 (ENSMZEG00005018620) ARVCF (ENSMZEG00005018621) ENSMZEG00005018625 ENSMZEG00005018627 nup155 (ENSMZEG00005018634) ENSMZEG00005018651 ENSMZEG00005018663 MLANA (ENSMZEG00005018684) KIAA2026 (ENSMZEG00005018687) UHRF2 (ENSMZEG00005018695) oaz1b (ENSMZEG00005018701) ERMP1 (ENSMZEG00005018708) #8 RIC1 (ENSMZEG00005018724) #9 Burton s mouthbrooder MODERN SPECIES 584 opn4xa (ENSHBUG00000021264) pdlim5b (ENSHBUG00000021350) bmpr1bb (ENSHBUG00000021405) UNC5C (ENSHBUG00000021530) glis3 (ENSHBUG00000021547) #22 rfx3 (ENSHBUG00000021638) #23 smad4a (ENSHBUG00000021658) BMP10 (ENSHBUG00000021667) ARVCF (ENSHBUG00000021682) ENSHBUG00000021723 ENSHBUG00000021735 nup155 (ENSHBUG00000021934) ENSHBUG00000021949 ENSHBUG00000022058 ENSHBUG00000022069 UHRF2 (ENSHBUG00000022178) oaz1b (ENSHBUG00000022196) ERMP1 (ENSHBUG00000022308) #8 RIC1 (ENSHBUG00000022396) #9 exosc2 (ENSHBUG00000022437) Lyretail cichlid MODERN SPECIES 304 uqcr10 (ENSNBRG00000003790) GAL3ST1 (ENSNBRG00000003803) ENSNBRG00000003828 srsf9 (ENSNBRG00000003888) ENSNBRG00000003914 git2b (ENSNBRG00000003985) ENSNBRG00000004040 FAM222A (ENSNBRG00000004059) ENSNBRG00000004113 WDR70 (ENSNBRG00000004265) gdnfa (ENSNBRG00000004334) opn4xa (ENSNBRG00000004370) pdlim5b (ENSNBRG00000004476) bmpr1bb (ENSNBRG00000004491) UNC5C (ENSNBRG00000004521) glis3 (ENSNBRG00000004595) #22 rfx3 (ENSNBRG00000004632) #23 smad4a (ENSNBRG00000004691) BMP10 (ENSNBRG00000004734) ARVCF (ENSNBRG00000004752) ENSNBRG00000004787 ENSNBRG00000004824 nup155 (ENSNBRG00000004838) ENSNBRG00000004934 ENSNBRG00000004956 ENSNBRG00000005203 UHRF2 (ENSNBRG00000005231) oaz1b (ENSNBRG00000005283) ERMP1 (ENSNBRG00000005304) #8 RIC1 (ENSNBRG00000005373) #9 exosc2 (ENSNBRG00000005453) Nile tilapia MODERN SPECIES 19 zmat5 (ENSONIG00000013964) uqcr10 (ENSONIG00000033772) GAL3ST1 (ENSONIG00000013968) ENSONIG00000013969 ENSONIG00000013976 srsf9 (ENSONIG00000013974) git2b (ENSONIG00000013982) ENSONIG00000041587 FAM222A (ENSONIG00000040639) WDR70 (ENSONIG00000014001) gdnfa (ENSONIG00000031992) opn4xa (ENSONIG00000014009) pdlim5b (ENSONIG00000014011) bmpr1bb (ENSONIG00000014017) UNC5C (ENSONIG00000014022) glis3 (ENSONIG00000014033) #22 rfx3 (ENSONIG00000014034) #23 smad4a (ENSONIG00000014036) BMP10 (ENSONIG00000039707) ARVCF (ENSONIG00000014044) ENSONIG00000014045 ENSONIG00000020400 nup155 (ENSONIG00000014046) ENSONIG00000014053 ENSONIG00000014060 UHRF2 (ENSONIG00000014061) oaz1b (ENSONIG00000014076) ERMP1 (ENSONIG00000014077) #8 RIC1 (ENSONIG00000014080) #9 exosc2 (ENSONIG00000014086) ABL1 (ENSONIG00000014093) Midas cichlid MODERN SPECIES 75 opn4xa (ENSACIG00000018281) pdlim5b (ENSACIG00000018322) bmpr1bb (ENSACIG00000018459) UNC5C (ENSACIG00000018481) glis3 (ENSACIG00000018517) #22 rfx3 (ENSACIG00000018552) #23 smad4a (ENSACIG00000018584) ENSACIG00000018604 BMP10 (ENSACIG00000018609) ARVCF (ENSACIG00000018628) ENSACIG00000018765 ENSACIG00000018793 nup155 (ENSACIG00000018799) ENSACIG00000018837 ENSACIG00000018846 ENSACIG00000018906 UHRF2 (ENSACIG00000018947) oaz1b (ENSACIG00000018980) ERMP1 (ENSACIG00000018992) #8 RIC1 (ENSACIG00000019017) #9 Pomacentridae ANCESTRAL SPECIES 12 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Pomacentridae_A ANCESTRAL SPECIES 10 ENSGT00390000009869 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Amphiprion ANCESTRAL SPECIES 5 ENSGT00390000009869 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225.a ENSGT00390000016532 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Orange clownfish MODERN SPECIES 7 uqcr10 (ENSAPEG00000011815) GAL3ST1 (ENSAPEG00000011822) ENSAPEG00000011847 srsf9 (ENSAPEG00000011908) ENSAPEG00000011934 git2b (ENSAPEG00000012069) ENSAPEG00000012206 FAM222A (ENSAPEG00000012249) WDR70 (ENSAPEG00000012274) gdnfa (ENSAPEG00000012340) opn4xa (ENSAPEG00000012350) pdlim5b (ENSAPEG00000012414) bmpr1bb (ENSAPEG00000012440) UNC5C (ENSAPEG00000012460) ENSAPEG00000012519 glis3 (ENSAPEG00000012665) #22 rfx3 (ENSAPEG00000012681) #23 smad4a (ENSAPEG00000012744) BMP10 (ENSAPEG00000012780) ARVCF (ENSAPEG00000012790) ENSAPEG00000012806 ENSAPEG00000012876 nup155 (ENSAPEG00000012883) ENSAPEG00000013035 MLANA (ENSAPEG00000013661) KIAA2026 (ENSAPEG00000013675) UHRF2 (ENSAPEG00000013724) oaz1b (ENSAPEG00000013799) ERMP1 (ENSAPEG00000013820) #8 RIC1 (ENSAPEG00000013948) #9 exosc2 (ENSAPEG00000014088) Clown anemonefish MODERN SPECIES 790 UNC5C (ENSAOCG00000021129) glis3 (ENSAOCG00000021022) #22 rfx3 (ENSAOCG00000021007) #23 smad4a (ENSAOCG00000020944) BMP10 (ENSAOCG00000020890) ARVCF (ENSAOCG00000020856) ENSAOCG00000020845 slc22a13b (ENSAOCG00000002232) slc22a13b (ENSAOCG00000020677) ENSAOCG00000020610 csrnp1b (ENSAOCG00000020582) ENSAOCG00000020564 GORASP1 (ENSAOCG00000020500) Spiny chromis MODERN SPECIES 37 apoda.1 (ENSAPOG00000010820) opn4xa (ENSAPOG00000010751) pdlim5b (ENSAPOG00000010737) bmpr1bb (ENSAPOG00000010718) UNC5C (ENSAPOG00000010638) glis3 (ENSAPOG00000010551) #22 rfx3 (ENSAPOG00000010514) #23 smad4a (ENSAPOG00000010474) BMP10 (ENSAPOG00000010442) ARVCF (ENSAPOG00000010422) ENSAPOG00000010409 ENSAPOG00000010383 nup155 (ENSAPOG00000010371) ENSAPOG00000010172 ENSAPOG00000009378 ENSAPOG00000009289 UHRF2 (ENSAPOG00000009269) oaz1b (ENSAPOG00000001045) ERMP1 (ENSAPOG00000009111) #8 RIC1 (ENSAPOG00000009018) #9 exosc2 (ENSAPOG00000008861) Bicolor damselfish MODERN SPECIES 757 glis3 (ENSSPAG00000004451) #22 rfx3 (ENSSPAG00000004491) #23 smad4a (ENSSPAG00000004597) BMP10 (ENSSPAG00000004631) ARVCF (ENSSPAG00000004656) ENSSPAG00000004838 ENSSPAG00000004867 nup155 (ENSSPAG00000004883) ENSSPAG00000005007 ENSSPAG00000005021 ENSSPAG00000005127 UHRF2 (ENSSPAG00000005157) oaz1b (ENSSPAG00000005232) ENSSPAG00000005261 #8 ENSSPAG00000005273 #8 Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B Eupercaria ANCESTRAL SPECIES 13 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Tetraodontidae ANCESTRAL SPECIES 21 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532.l ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Fugu DUPLICATION Fugu MODERN SPECIES 18 srsf9 (ENSTRUG00000012723) ENSTRUG00000012834 git2b (ENSTRUG00000013096) ENSTRUG00000031950 WDR70 (ENSTRUG00000013416) gdnfa (ENSTRUG00000013519) opn4xa (ENSTRUG00000013541) pdlim5b (ENSTRUG00000013562) bmpr1bb (ENSTRUG00000013761) glis3 (ENSTRUG00000019777) #22 smad4a (ENSTRUG00000032526) BMP10 (ENSTRUG00000027837) ENSTRUG00000028974 ENSTRUG00000029487 UNC5C (ENSTRUG00000013878) glis3 (ENSTRUG00000030406) #22 smad4a (ENSTRUG00000014045) BMP10 (ENSTRUG00000014185) ARVCF (ENSTRUG00000014229) ENSTRUG00000021607 ENSTRUG00000020119 nup155 (ENSTRUG00000014297) ENSTRUG00000014488 ENSTRUG00000022114 ENSTRUG00000023033 UHRF2 (ENSTRUG00000014575) ENSTRUG00000032035 oaz1b (ENSTRUG00000014651) ERMP1 (ENSTRUG00000014672) #8 RIC1 (ENSTRUG00000014728) #9 exosc2 (ENSTRUG00000022436) Fugu MODERN SPECIES 18 tescb (ENSTRUG00000012428) CABP7 (ENSTRUG00000012475) zmat5 (ENSTRUG00000012501) uqcr10 (ENSTRUG00000012529) GAL3ST1 (ENSTRUG00000012538) ENSTRUG00000012588 srsf9 (ENSTRUG00000012723) ENSTRUG00000012834 git2b (ENSTRUG00000013096) ENSTRUG00000031950 WDR70 (ENSTRUG00000013416) gdnfa (ENSTRUG00000013519) opn4xa (ENSTRUG00000013541) pdlim5b (ENSTRUG00000013562) bmpr1bb (ENSTRUG00000013761) glis3 (ENSTRUG00000019777) #22 smad4a (ENSTRUG00000032526) BMP10 (ENSTRUG00000027837) ENSTRUG00000028974 ENSTRUG00000029487 UNC5C (ENSTRUG00000013878) glis3 (ENSTRUG00000030406) #22 smad4a (ENSTRUG00000014045) BMP10 (ENSTRUG00000014185) ARVCF (ENSTRUG00000014229) ENSTRUG00000021607 ENSTRUG00000020119 nup155 (ENSTRUG00000014297) ENSTRUG00000014488 ENSTRUG00000022114 ENSTRUG00000023033 Tetraodon MODERN SPECIES 19 zmat5 (ENSTNIG00000009066) GAL3ST1 (ENSTNIG00000009065) PRODH (ENSTNIG00000009064) srsf9 (ENSTNIG00000000697) ENSTNIG00000009063 git2b (ENSTNIG00000009062) ENSTNIG00000009061 FAM222A (ENSTNIG00000009060) ENSTNIG00000009059 WDR70 (ENSTNIG00000009058) gdnfa (ENSTNIG00000009057) opn4xa (ENSTNIG00000009056) pdlim5b (ENSTNIG00000009055) bmpr1bb (ENSTNIG00000009054) UNC5C (ENSTNIG00000009053) ENSTNIG00000009052 #22 rfx3 (ENSTNIG00000009051) #23 smad4a (ENSTNIG00000009050) BMP10 (ENSTNIG00000009049) ARVCF (ENSTNIG00000009048) ENSTNIG00000009047 nup155 (ENSTNIG00000009046) ENSTNIG00000009045 ENSTNIG00000009044 ENSTNIG00000009043 oaz1b (ENSTNIG00000001544) ERMP1 (ENSTNIG00000009042) #8 RIC1 (ENSTNIG00000009041) #9 ABL1 (ENSTNIG00000009040) rab14 (ENSTNIG00000009039) ENSTNIG00000009038 Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000180190 ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Ballan wrasse MODERN SPECIES 28 PRODH (ENSLBEG00000017359) ENSLBEG00000017401 srsf9 (ENSLBEG00000017430) ENSLBEG00000017472 git2b (ENSLBEG00000017550) ENSLBEG00000017619 FAM222A (ENSLBEG00000017651) ENSLBEG00000017669 ENSLBEG00000017710 WDR70 (ENSLBEG00000017858) gdnfa (ENSLBEG00000017940) opn4xa (ENSLBEG00000017961) pdlim5b (ENSLBEG00000017996) bmpr1bb (ENSLBEG00000018060) UNC5C (ENSLBEG00000018140) glis3 (ENSLBEG00000018235) #22 rfx3 (ENSLBEG00000018260) #23 smad4a (ENSLBEG00000018291) BMP10 (ENSLBEG00000018326) ARVCF (ENSLBEG00000018360) ENSLBEG00000018432 ENSLBEG00000018492 nup155 (ENSLBEG00000018561) ENSLBEG00000018683 ENSLBEG00000018699 ENSLBEG00000018855 ENSLBEG00000018934 UHRF2 (ENSLBEG00000018956) oaz1b (ENSLBEG00000019066) ERMP1 (ENSLBEG00000019097) #8 RIC1 (ENSLBEG00000019176) #9 Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Perciformes ANCESTRAL SPECIES 16 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Perciformes_a ANCESTRAL SPECIES 12 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 Pike perch MODERN SPECIES 48 ENSSLUG00000022115 srsf9 (ENSSLUG00000022087) ENSSLUG00000022077 git2b (ENSSLUG00000021797) ENSSLUG00000021752 FAM222A (ENSSLUG00000021750) ENSSLUG00000021744 WDR70 (ENSSLUG00000020966) gdnfa (ENSSLUG00000020913) opn4xa (ENSSLUG00000020911) pdlim5b (ENSSLUG00000020893) ENSSLUG00000020887 ENSSLUG00000020884 bmpr1bb (ENSSLUG00000020466) UNC5C (ENSSLUG00000017419) glis3 (ENSSLUG00000017236) #22 rfx3 (ENSSLUG00000017230) #23 smad4a (ENSSLUG00000017212) BMP10 (ENSSLUG00000017205) ARVCF (ENSSLUG00000017152) ENSSLUG00000017136 ENSSLUG00000017131 nup155 (ENSSLUG00000016520) ENSSLUG00000016379 ENSSLUG00000016357 UHRF2 (ENSSLUG00000016186) oaz1b (ENSSLUG00000016174) ERMP1 (ENSSLUG00000016162) #8 RIC1 (ENSSLUG00000016075) #9 exosc2 (ENSSLUG00000016017) ABL1 (ENSSLUG00000015925) Channel bull blenny MODERN SPECIES 3 ENSCGOG00000020377 ENSCGOG00000020373 ENSCGOG00000020371 srsf9 (ENSCGOG00000020370) ENSCGOG00000019195 git2b (ENSCGOG00000017411) ENSCGOG00000019162 FAM222A (ENSCGOG00000017377) WDR70 (ENSCGOG00000017028) gdnfa (ENSCGOG00000017012) opn4xa (ENSCGOG00000016995) pdlim5b (ENSCGOG00000016992) bmpr1bb (ENSCGOG00000016442) UNC5C (ENSCGOG00000014277) ENSCGOG00000014204 glis3 (ENSCGOG00000014201) #22 rfx3 (ENSCGOG00000014006) #23 smad4a (ENSCGOG00000012994) BMP10 (ENSCGOG00000012935) ARVCF (ENSCGOG00000012737) ENSCGOG00000012732 ENSCGOG00000012730 nup155 (ENSCGOG00000011506) ENSCGOG00000008729 ENSCGOG00000008669 UHRF2 (ENSCGOG00000008002) oaz1b (ENSCGOG00000007978) ERMP1 (ENSCGOG00000007891) #8 RIC1 (ENSCGOG00000007380) #9 exosc2 (ENSCGOG00000007190) ABL1 (ENSCGOG00000007126) Cottioidei ANCESTRAL SPECIES 18 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000175928 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Lumpfish MODERN SPECIES 3 uqcr10 (ENSCLMG00005016175) GAL3ST1 (ENSCLMG00005016174) ENSCLMG00005016156 srsf9 (ENSCLMG00005016142) ENSCLMG00005016138 git2b (ENSCLMG00005015872) ENSCLMG00005015846 ENSCLMG00005015845 FAM222A (ENSCLMG00005015844) WDR70 (ENSCLMG00005014985) gdnfa (ENSCLMG00005014972) opn4xa (ENSCLMG00005014962) pdlim5b (ENSCLMG00005014956) bmpr1bb (ENSCLMG00005014799) UNC5C (ENSCLMG00005014796) glis3 (ENSCLMG00005014786) #22 rfx3 (ENSCLMG00005013930) #23 smad4a (ENSCLMG00005013627) BMP10 (ENSCLMG00005013623) ARVCF (ENSCLMG00005013622) ENSCLMG00005013615 ENSCLMG00005013613 nup155 (ENSCLMG00005013612) ENSCLMG00005002624 ENSCLMG00005002563 ENSCLMG00005002561 UHRF2 (ENSCLMG00005002519) oaz1b (ENSCLMG00005002514) ERMP1 (ENSCLMG00005002477) #8 RIC1 (ENSCLMG00005002458) #9 exosc2 (ENSCLMG00005002457) Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a Gilthead seabream MODERN SPECIES 3 UQCR10 (ENSSAUG00010021526) GAL3ST1 (ENSSAUG00010021529) ENSSAUG00010021534 srsf9 (ENSSAUG00010021704) ENSSAUG00010021723 git2b (ENSSAUG00010021972) ENSSAUG00010022158 FAM222A (ENSSAUG00010022159) ENSSAUG00010022160 WDR70 (ENSSAUG00010022165) gdnfa (ENSSAUG00010022502) opn4xa (ENSSAUG00010022504) pdlim5b (ENSSAUG00010022506) bmpr1bb (ENSSAUG00010022511) UNC5C (ENSSAUG00010022876) glis3 (ENSSAUG00010024264) #22 rfx3 (ENSSAUG00010024276) #23 smad4a (ENSSAUG00010024325) BMP10 (ENSSAUG00010024327) ARVCF (ENSSAUG00010024329) ENSSAUG00010024333 nup155 (ENSSAUG00010024341) ENSSAUG00010024585 MLANA (ENSSAUG00010024670) KIAA2026 (ENSSAUG00010024672) UHRF2 (ENSSAUG00010024681) oaz1b (ENSSAUG00010024738) ERMP1 (ENSSAUG00010024745) #8 RIC1 (ENSSAUG00010024782) #9 exosc2 (ENSSAUG00010024796) ABL1 (ENSSAUG00010024811) Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a European seabass MODERN SPECIES 9 tescb (ENSDLAG00005021415) ENSDLAG00005029972 zmat5 (ENSDLAG00005026922) ENSDLAG00005021183 ENSDLAG00005021162 ENSDLAG00005021027 ENSDLAG00005016212 ENSDLAG00005015748 ENSDLAG00005016044 ENSDLAG00005015770 gdnfa (ENSDLAG00005029352) opn4xa (ENSDLAG00005015716) pdlim5b (ENSDLAG00005027877) bmpr1bb (ENSDLAG00005015061) UNC5C (ENSDLAG00005012944) glis3 (ENSDLAG00005012865) #22 rfx3 (ENSDLAG00005012256) #23 smad4a (ENSDLAG00005032169) ENSDLAG00005012213 ENSDLAG00005011789 ENSDLAG00005011755 ENSDLAG00005011767 ENSDLAG00005011338 ENSDLAG00005011169 ENSDLAG00005011109 ENSDLAG00005009969 ENSDLAG00005009941 ENSDLAG00005009689 #8 ENSDLAG00005008555 #9 exosc2 (ENSDLAG00005008514) ENSDLAG00005008230 Large yellow croaker MODERN SPECIES 4 uqcr10 (ENSLCRG00005003599) GAL3ST1 (ENSLCRG00005003601) ENSLCRG00005003606 srsf9 (ENSLCRG00005004306) ENSLCRG00005004314 git2b (ENSLCRG00005004331) ENSLCRG00005004370 FAM222A (ENSLCRG00005004373) ENSLCRG00005004383 WDR70 (ENSLCRG00005004409) gdnfa (ENSLCRG00005005391) opn4xa (ENSLCRG00005005397) pdlim5b (ENSLCRG00005005408) bmpr1bb (ENSLCRG00005005416) UNC5C (ENSLCRG00005005820) glis3 (ENSLCRG00005009538) #22 rfx3 (ENSLCRG00005009549) #23 smad4a (ENSLCRG00005011093) BMP10 (ENSLCRG00005011104) ARVCF (ENSLCRG00005011106) ENSLCRG00005011118 ENSLCRG00005011119 nup155 (ENSLCRG00005011128) ENSLCRG00005011233 MLANA (ENSLCRG00005011335) KIAA2026 (ENSLCRG00005011343) UHRF2 (ENSLCRG00005011361) oaz1b (ENSLCRG00005011446) ERMP1 (ENSLCRG00005011455) #8 RIC1 (ENSLCRG00005011482) #9 exosc2 (ENSLCRG00005011489) Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00970000194241 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Anabantaria ANCESTRAL SPECIES 12 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 Zig-zag eel MODERN SPECIES 3 UQCR10 (ENSMAMG00000011515) ENSMAMG00000011527 ENSMAMG00000011538 ENSMAMG00000011581 ENSMAMG00000011599 ENSMAMG00000011640 ENSMAMG00000026088 ENSMAMG00000011709 ENSMAMG00000027403 ENSMAMG00000011715 gdnfa (ENSMAMG00000011729) opn4xa (ENSMAMG00000011749) pdlim5b (ENSMAMG00000011762) bmpr1bb (ENSMAMG00000011816) UNC5C (ENSMAMG00000011881) glis3 (ENSMAMG00000011917) #22 rfx3 (ENSMAMG00000011935) #23 smad4a (ENSMAMG00000011989) ENSMAMG00000012033 ENSMAMG00000012047 ENSMAMG00000028079 ENSMAMG00000012098 ENSMAMG00000012172 ENSMAMG00000012373 ENSMAMG00000012395 ENSMAMG00000012458 ENSMAMG00000012466 ENSMAMG00000012491 #9 ENSMAMG00000012627 #8 ENSMAMG00000012709 ENSMAMG00000012750 Anabantoidei ANCESTRAL SPECIES 16 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 Climbing perch MODERN SPECIES 3 zmat5 (ENSATEG00000020071) UQCR10 (ENSATEG00000020091) ENSATEG00000020049 ENSATEG00000020011 ENSATEG00000019984 ENSATEG00000019936 ENSATEG00000019872 ENSATEG00000019850 ENSATEG00000019843 ENSATEG00000019788 gdnfa (ENSATEG00000025610) opn4xa (ENSATEG00000019730) pdlim5b (ENSATEG00000019707) bmpr1bb (ENSATEG00000019663) UNC5C (ENSATEG00000019548) glis3 (ENSATEG00000019518) #22 rfx3 (ENSATEG00000019466) #23 smad4a (ENSATEG00000019422) ENSATEG00000019411 ENSATEG00000019396 ENSATEG00000019385 ENSATEG00000019247 ENSATEG00000019067 ENSATEG00000018999 ENSATEG00000018932 ENSATEG00000018879 ENSATEG00000018816 #8 ENSATEG00000018719 #9 exosc2 (ENSATEG00000018680) ENSATEG00000018625 ENSATEG00000018600 Siamese fighting fish MODERN SPECIES 3 zmat5 (ENSBSLG00000003684) uqcr10 (ENSBSLG00000003705) GAL3ST1 (ENSBSLG00000003713) PRODH (ENSBSLG00000003837) srsf9 (ENSBSLG00000004081) ENSBSLG00000004087 git2b (ENSBSLG00000004162) FAM222A (ENSBSLG00000004390) ENSBSLG00000004775 WDR70 (ENSBSLG00000005018) gdnfa (ENSBSLG00000005905) opn4xa (ENSBSLG00000005912) pdlim5b (ENSBSLG00000006360) bmpr1bb (ENSBSLG00000006648) UNC5C (ENSBSLG00000007167) glis3 (ENSBSLG00000009272) #22 rfx3 (ENSBSLG00000009302) #23 smad4a (ENSBSLG00000009477) BMP10 (ENSBSLG00000009573) ARVCF (ENSBSLG00000009733) ENSBSLG00000010003 ENSBSLG00000010016 nup155 (ENSBSLG00000010054) ENSBSLG00000010301 ENSBSLG00000010326 UHRF2 (ENSBSLG00000010819) oaz1b (ENSBSLG00000011504) ERMP1 (ENSBSLG00000011523) #8 RIC1 (ENSBSLG00000011928) #9 exosc2 (ENSBSLG00000012167) ABL1 (ENSBSLG00000012314) Carangaria ANCESTRAL SPECIES 17 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00970000194241 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Carangaria_A ANCESTRAL SPECIES 18 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 Seriola ANCESTRAL SPECIES 19 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 ENSGT00940000153596.B ENSGT00940000153838.a ENSGT00940000155178 Greater amberjack MODERN SPECIES 216 bmpr1bb (ENSSDUG00000005566) UNC5C (ENSSDUG00000005477) glis3 (ENSSDUG00000005433) #22 rfx3 (ENSSDUG00000005356) #23 smad4a (ENSSDUG00000005304) BMP10 (ENSSDUG00000005285) ARVCF (ENSSDUG00000005215) ENSSDUG00000005185 ENSSDUG00000005179 nup155 (ENSSDUG00000005030) ENSSDUG00000005001 ENSSDUG00000004924 ENSSDUG00000004895 UHRF2 (ENSSDUG00000004825) oaz1b (ENSSDUG00000004803) ERMP1 (ENSSDUG00000004729) #8 RIC1 (ENSSDUG00000004672) #9 exosc2 (ENSSDUG00000004634) Yellowtail amberjack MODERN SPECIES 2993 uqcr10 (ENSSLDG00000012393) GAL3ST1 (ENSSLDG00000012395) ENSSLDG00000012346 srsf9 (ENSSLDG00000012305) ENSSLDG00000012195 git2b (ENSSLDG00000012072) ENSSLDG00000012023 FAM222A (ENSSLDG00000012007) ENSSLDG00000011896 WDR70 (ENSSLDG00000011844) gdnfa (ENSSLDG00000011810) opn4xa (ENSSLDG00000011793) pdlim5b (ENSSLDG00000011763) bmpr1bb (ENSSLDG00000011716) UNC5C (ENSSLDG00000011559) glis3 (ENSSLDG00000011489) #22 rfx3 (ENSSLDG00000011445) #23 smad4a (ENSSLDG00000011357) BMP10 (ENSSLDG00000011329) ARVCF (ENSSLDG00000011280) ENSSLDG00000011205 ENSSLDG00000011179 nup155 (ENSSLDG00000011031) ENSSLDG00000010985 ENSSLDG00000010900 ENSSLDG00000010851 UHRF2 (ENSSLDG00000010802) oaz1b (ENSSLDG00000010778) ERMP1 (ENSSLDG00000010736) #8 RIC1 (ENSSLDG00000010673) #9 exosc2 (ENSSLDG00000010616) Barramundi perch MODERN SPECIES 269 UNC5C (ENSLCAG00010006614) glis3 (ENSLCAG00010006586) #22 rfx3 (ENSLCAG00010006561) #23 smad4a (ENSLCAG00010006525) BMP10 (ENSLCAG00010006514) ARVCF (ENSLCAG00010006506) ENSLCAG00010006499 nup155 (ENSLCAG00010006449) ENSLCAG00010006412 ENSLCAG00010006402 UHRF2 (ENSLCAG00010006354) oaz1b (ENSLCAG00010006337) ENSLCAG00010006334 ERMP1 (ENSLCAG00010006304) #8 RIC1 (ENSLCAG00010005942) #9 exosc2 (ENSLCAG00010005872) ABL1 (ENSLCAG00010005729) Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00390000014052 ENSGT00950000182923.C.b ENSGT00390000006265.b.c ENSGT00940000156839 ENSGT00940000156871.p ENSGT00940000156383.b ENSGT00940000155182.a ENSGT00530000063811.B.b ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b.a ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00730000112225 ENSGT00390000016532 ENSGT00940000176177 ENSGT00970000194241 ENSGT00390000009531 ENSGT00390000011483 ENSGT00390000008296.b.b ENSGT00940000166601 ENSGT00530000063839 #8 ENSGT00390000002955 #9 Turbot MODERN SPECIES 7 zmat5 (ENSSMAG00000030335) UQCR10 (ENSSMAG00000001912) ENSSMAG00000001941 ENSSMAG00000001963 ENSSMAG00000002039 ENSSMAG00000002054 ENSSMAG00000002120 ENSSMAG00000002233 ENSSMAG00000002249 ENSSMAG00000002311 gdnfa (ENSSMAG00000002331) opn4xa (ENSSMAG00000002337) pdlim5b (ENSSMAG00000002349) bmpr1bb (ENSSMAG00000002364) UNC5C (ENSSMAG00000002408) glis3 (ENSSMAG00000002564) #22 rfx3 (ENSSMAG00000002591) #23 smad4a (ENSSMAG00000002673) ENSSMAG00000002714 ENSSMAG00000002728 ENSSMAG00000002742 ENSSMAG00000002759 ENSSMAG00000002770 ENSSMAG00000002824 ENSSMAG00000002926 ENSSMAG00000002939 ENSSMAG00000002990 ENSSMAG00000003001 #8 ENSSMAG00000003043 #9 exosc2 (ENSSMAG00000003112) ENSSMAG00000003144 Tongue sole MODERN SPECIES 5 PLPP7 (ENSCSEG00000017426) fam78ab (ENSCSEG00000017421) ENSCSEG00000017366 NACC2 (ENSCSEG00000017316) LHX3 (ENSCSEG00000017295) ENSCSEG00000017292 ENSCSEG00000017290 ak1 (ENSCSEG00000017279) ENSCSEG00000017255 brinp1 (ENSCSEG00000017221) ENSCSEG00000017207 trim32 (ENSCSEG00000017205) ASTN2 (ENSCSEG00000017190) bmpr1bb (ENSCSEG00000016981) UNC5C (ENSCSEG00000016909) glis3 (ENSCSEG00000016889) #22 rfx3 (ENSCSEG00000016846) #23 smad4a (ENSCSEG00000016829) BMP10 (ENSCSEG00000016823) ARVCF (ENSCSEG00000016810) ENSCSEG00000016795 ENSCSEG00000016790 nup155 (ENSCSEG00000016754) ENSCSEG00000016748 ENSCSEG00000016739 ENSCSEG00000016736 MLANA (ENSCSEG00000016732) ENSCSEG00000016706 ENSCSEG00000016668 oaz1b (ENSCSEG00000016656) oaz1b (ENSCSEG00000016651) Tiger tail seahorse MODERN SPECIES 143 UNC5C (ENSHCOG00000000496) glis3 (ENSHCOG00000018717) #22 rfx3 (ENSHCOG00000018764) #23 smad4a (ENSHCOG00000018817) ENSHCOG00000018848 ENSHCOG00000018853 nup155 (ENSHCOG00000018914) ENSHCOG00000018930 ENSHCOG00000018934 ENSHCOG00000018966 MLANA (ENSHCOG00000018979) ENSHCOG00000018984 UHRF2 (ENSHCOG00000018996) oaz1b (ENSHCOG00000019012) ERMP1 (ENSHCOG00000019022) #8 RIC1 (ENSHCOG00000019095) #9 exosc2 (ENSHCOG00000019130) Pinecone sodierfish MODERN SPECIES 3 uqcr10 (ENSMMDG00005019911) GAL3ST1 (ENSMMDG00005019908) ENSMMDG00005019818 srsf9 (ENSMMDG00005019812) ENSMMDG00005019797 git2b (ENSMMDG00005019183) ENSMMDG00005019142 FAM222A (ENSMMDG00005019140) ENSMMDG00005019135 WDR70 (ENSMMDG00005017877) gdnfa (ENSMMDG00005017829) opn4xa (ENSMMDG00005017813) pdlim5b (ENSMMDG00005017642) bmpr1bb (ENSMMDG00005016697) UNC5C (ENSMMDG00005016667) glis3 (ENSMMDG00005016661) #22 rfx3 (ENSMMDG00005015981) #23 smad4a (ENSMMDG00005015880) BMP10 (ENSMMDG00005015878) syk (ENSMMDG00005015877) ENSMMDG00005015865 macir (ENSMMDG00005015859) PAM (ENSMMDG00005015822) chd1 (ENSMMDG00005013821) reep5 (ENSMMDG00005013766) YTHDC2 (ENSMMDG00005013738) ENSMMDG00005013729 ENSMMDG00005013728 ENSMMDG00005013720 hmgcs1 (ENSMMDG00005013714) FASTKD5 (ENSMMDG00005013712) Osteoglossiformes ANCESTRAL SPECIES 209 ENSGT00950000182869.e.b.g.b ENSGT00940000156896 #22 ENSGT01050000244879.a.a.b #23 ENSGT00940000156133.a.b ENSGT00940000156488.a.a.g ENSGT01030000234989 ENSGT00990000203805 ENSGT00390000017134.b ENSGT00390000015813.b.b ENSGT01020000230438.C.f.b ENSGT00940000159434.p ENSGT00390000014107.a.a ENSGT00390000009387 ENSGT00940000163130 ENSGT00390000017655.k ENSGT00940000162972 ENSGT00940000154575.a.b Asian bonytongue MODERN SPECIES 21 slc2a11l (ENSSFOG00015016375) nt5c2l1 (ENSSFOG00015016324) RNF208 (ENSSFOG00015028895) slc5a1 (ENSSFOG00015016283) ywhah (ENSSFOG00015016274) DEPDC5 (ENSSFOG00015016202) rab36 (ENSSFOG00015016156) GNAZ (ENSSFOG00015028594) sppl3 (ENSSFOG00015031011) sdf2l1 (ENSSFOG00015032321) UBE2L5 (ENSSFOG00015016080) hic2 (ENSSFOG00015016070) pi4kaa (ENSSFOG00015015982) SLC25A1 (ENSSFOG00015015942) zgc:56235 (ENSSFOG00015015933) glis3 (ENSSFOG00015015922) #22 rfx3 (ENSSFOG00015029856) #23 FOXN4 (ENSSFOG00015015852) ENSSFOG00015015832 SSH1 (ENSSFOG00015015810) ENSSFOG00015015764 ENSSFOG00015015743 ENSSFOG00015026039 iscub (ENSSFOG00015026978) CMKLR1 (ENSSFOG00015015689) wscd2 (ENSSFOG00015015648) rnf185 (ENSSFOG00015015627) PIK3IP1 (ENSSFOG00015015561) ess2 (ENSSFOG00015015525) TSSK1B (ENSSFOG00015015442) dgcr2 (ENSSFOG00015015397) P. kingsleyae MODERN SPECIES 9 ENSPKIG00000018292 xpo7 (ENSPKIG00000018175) pbdc1 (ENSPKIG00000018127) dmtn (ENSPKIG00000018115) adam9 (ENSPKIG00000018077) ENSPKIG00000018049 GNAZ (ENSPKIG00000018034) sppl3 (ENSPKIG00000018000) sdf2l1 (ENSPKIG00000017963) ube2l3b (ENSPKIG00000017942) hic2 (ENSPKIG00000017929) pi4kaa (ENSPKIG00000017878) ENSPKIG00000017835 SLC25A1 (ENSPKIG00000017818) zgc:56235 (ENSPKIG00000017776) glis3 (ENSPKIG00000017730) #22 rfx3 (ENSPKIG00000017641) #23 FOXN4 (ENSPKIG00000017607) UNG (ENSPKIG00000017575) SSH1 (ENSPKIG00000017517) ENSPKIG00000017407 ENSPKIG00000017354 tmem119b (ENSPKIG00000017340) iscub (ENSPKIG00000017322) CMKLR1 (ENSPKIG00000017305) wscd2 (ENSPKIG00000017279) rnf185 (ENSPKIG00000017239) ENSPKIG00000017186 ess2 (ENSPKIG00000017140) dgcr2 (ENSPKIG00000017103) car15 (ENSPKIG00000017080) Spotted gar MODERN SPECIES 658 smad4a (ENSLOCG00000012872) MEX3C (ENSLOCG00000012879) CCSER1 (ENSLOCG00000012882) ENSLOCG00000012889 grid2 (ENSLOCG00000012893) atoh1a (ENSLOCG00000017552) smarcad1a (ENSLOCG00000012909) HPGDS (ENSLOCG00000012916) opn4xa (ENSLOCG00000012921) pdlim5b (ENSLOCG00000012933) bmpr1bb (ENSLOCG00000012942) UNC5C (ENSLOCG00000012954) ENSLOCG00000012957 ENSLOCG00000012961 ENSLOCG00000012963 glis3 (ENSLOCG00000012972) #22 rfx3 (ENSLOCG00000012975) #23 ENSLOCG00000012978 ENSLOCG00000012980 ENSLOCG00000012985 ENSLOCG00000012988 ENSLOCG00000012992 ENSLOCG00000013000 ENSLOCG00000013002 ENSLOCG00000013009 gal3st4 (ENSLOCG00000013014) gal3st4 (ENSLOCG00000013024) trappc14 (ENSLOCG00000013030) zanl (ENSLOCG00000013041) ENSLOCG00000013053 COPS6 (ENSLOCG00000013063)