Myomorpha	ANCESTRAL SPECIES	8	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00700000106050	ENSGT00940000158311 #16	ENSGT00940000162440 #17	ENSGT00940000163268 #18	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.a ##35	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37	ENSGT00940000155880
Muroidea	ANCESTRAL SPECIES	8	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00700000106050	ENSGT00940000158311 #16	ENSGT00940000162440 #17	ENSGT00940000163268 #18	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.a ##35	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37	ENSGT00940000155880
Upper Galilee mountains blind mole rat	MODERN SPECIES	1152	Chn2 (ENSNGAG00000023838) #7	Cpvl (ENSNGAG00000024201) #8	Tril (ENSNGAG00000012621) #9	Creb5 (ENSNGAG00000024347) #10	Jazf1 (ENSNGAG00000015532) #11	Tax1bp1 (ENSNGAG00000023119) #12	Hibadh (ENSNGAG00000011196) #13	Evx1 (ENSNGAG00000001633) #14	Hoxa13 (ENSNGAG00000024186) #15	Hoxa11 (ENSNGAG00000023780) #16	ENSNGAG00000013764 #17	ENSNGAG00000017228 #18	Hoxa9 (ENSNGAG00000016754) #19	Hoxa7 (ENSNGAG00000021697) #20	Hoxa6 (ENSNGAG00000012897) #21	Hoxa5 (ENSNGAG00000023140) #22	Hoxa4 (ENSNGAG00000022510) #23	Hoxa3 (ENSNGAG00000016765) #24	Hoxa2 (ENSNGAG00000014874) #25	Hoxa1 (ENSNGAG00000021363) #26	Skap2 (ENSNGAG00000016991) #27	ENSNGAG00000010519 #28	Snx10 (ENSNGAG00000006392) #29	ENSNGAG00000024194 #30	Hnrnpa2b1 (ENSNGAG00000015156) #31	Nfe2l3 (ENSNGAG00000023028) #32	Npvf (ENSNGAG00000023484) #33	4921507P07Rik (ENSNGAG00000022528) #34	ENSNGAG00000013657 #35	ENSNGAG00000003815 #36	ENSNGAG00000024141 #37
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT01030000234635.a.b.a.a #7	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00700000106050	ENSGT00940000158311 #16	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.a ##35	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37	ENSGT00940000155880
Murinae	ANCESTRAL SPECIES	4	ENSGT01030000234635.a.b.a.a #7	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00700000106050	ENSGT00940000158311 #16	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.a ##30	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.a ##35	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37
Mus	ANCESTRAL SPECIES	20	ENSGT01030000234635.a.b.a.a #7	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00700000106050	ENSGT00940000158311 #16	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000168920	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.a ##30	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37
Mus_A	ANCESTRAL SPECIES	7	ENSGT01030000234635.a.b.a.a #7	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00700000106050	ENSGT00940000158311 #16	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000168920	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37	ENSGT00940000155880
Mus_B	ANCESTRAL SPECIES	20	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00700000106050	ENSGT00940000158311 #16	ENSGT00940000163268 #18	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000168920	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37	ENSGT00940000155880
Mouse	MODERN SPECIES	15	Prr15 (ENSMUSG00000045725)	Chn2 (ENSMUSG00000004633) #7	Cpvl (ENSMUSG00000052955) #8	Tril (ENSMUSG00000043496) #9	Creb5 (ENSMUSG00000053007) #10	Jazf1 (ENSMUSG00000063568) #11	Tax1bp1 (ENSMUSG00000004535) #12	Hibadh (ENSMUSG00000029776) #13	Evx1 (ENSMUSG00000005503) #14	Hoxa13 (ENSMUSG00000038203) #15	Hoxa11 (ENSMUSG00000038210) #16	Hoxa10 (ENSMUSG00000000938) #17	Hoxa9 (ENSMUSG00000038227) #19	Hoxa7 (ENSMUSG00000038236) #20	Hoxa6 (ENSMUSG00000043219) #21	Hoxa5 (ENSMUSG00000038253) #22	Hoxa4 (ENSMUSG00000000942) #23	Hoxa3 (ENSMUSG00000079560) #24	Hoxa2 (ENSMUSG00000014704) #25	Hoxa1 (ENSMUSG00000029844) #26	Skap2 (ENSMUSG00000059182) #27	Snx10 (ENSMUSG00000038301) #29	Cbx3 (ENSMUSG00000029836) #30	Hnrnpa2b1 (ENSMUSG00000004980) #31	Nfe2l3 (ENSMUSG00000029832) #32	Npvf (ENSMUSG00000029831) #33	4921507P07Rik (ENSMUSG00000029828) #34	Cycs (ENSMUSG00000063694) ##35	Osbpl3 (ENSMUSG00000029822) #37	Gsdme (ENSMUSG00000029821)	Pals2 (ENSMUSG00000038388)
Mus_C	ANCESTRAL SPECIES	19	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00700000106050	ENSGT00940000158311 #16	ENSGT00940000163268 #18	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000168920	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.a ##35	ENSGT00940000155957 #37	ENSGT00940000155880
Steppe mouse	MODERN SPECIES	3410			ENSMSIG00000009588 #10	Jazf1 (ENSMSIG00000009609) #11	Tax1bp1 (ENSMSIG00000009618) #12	Hibadh (ENSMSIG00000009672) #13	ENSMSIG00000009698	Evx1 (ENSMSIG00000009707) #14	ENSMSIG00000009733 #15	ENSMSIG00000009764	Hoxa11 (ENSMSIG00000009809) #16	ENSMSIG00000009817 #18	Hoxa9 (ENSMSIG00000009832) #19	Hoxa7 (ENSMSIG00000009836) #20	Hoxa6 (ENSMSIG00000009850) #21	ENSMSIG00000009856 #22	Hoxa4 (ENSMSIG00000009874) #23	Hoxa3 (ENSMSIG00000009863) #24	ENSMSIG00000009893	ENSMSIG00000009910	Hoxa2 (ENSMSIG00000009914) #25	Hoxa1 (ENSMSIG00000009971) #26	Skap2 (ENSMSIG00000009994) #27	Snx10 (ENSMSIG00000010059) #29	Cbx3 (ENSMSIG00000010130) #30	Hnrnpa2b1 (ENSMSIG00000010191) #31	Nfe2l3 (ENSMSIG00000010307) #32
spretus	MODERN SPECIES	15	Prr15 (MGP_SPRETEiJ_G0029403)	Chn2 (MGP_SPRETEiJ_G0029402) #7	Cpvl (MGP_SPRETEiJ_G0029401) #8	Tril (MGP_SPRETEiJ_G0029400) #9	Creb5 (MGP_SPRETEiJ_G0029399) #10	Jazf1 (MGP_SPRETEiJ_G0029398) #11	Tax1bp1 (MGP_SPRETEiJ_G0029397) #12	Hibadh (MGP_SPRETEiJ_G0029396) #13	Evx1 (MGP_SPRETEiJ_G0029395) #14	MGP_SPRETEiJ_G0029394 #15	Hoxa11 (MGP_SPRETEiJ_G0029393) #16	Hoxa10 (MGP_SPRETEiJ_G0029392) #17	Hoxa9 (MGP_SPRETEiJ_G0029391) #19	Hoxa7 (MGP_SPRETEiJ_G0029390) #20	Hoxa6 (MGP_SPRETEiJ_G0029389) #21	Hoxa5 (MGP_SPRETEiJ_G0029388) #22	Hoxa4 (MGP_SPRETEiJ_G0029387) #23	Hoxa3 (MGP_SPRETEiJ_G0029386) #24	MGP_SPRETEiJ_G0029385	Hoxa2 (MGP_SPRETEiJ_G0029384) #25	Hoxa1 (MGP_SPRETEiJ_G0029383) #26	Skap2 (MGP_SPRETEiJ_G0029382) #27	Snx10 (MGP_SPRETEiJ_G0029381) #29	MGP_SPRETEiJ_G0029380 ##30	Hnrnpa2b1 (MGP_SPRETEiJ_G0029379) #31	Nfe2l3 (MGP_SPRETEiJ_G0029378) #32	Npvf (MGP_SPRETEiJ_G0029377) #33	4921507P07Rik (MGP_SPRETEiJ_G0029376) #34	Osbpl3 (MGP_SPRETEiJ_G0029375) #37	Gsdme (MGP_SPRETEiJ_G0029374)	Pals2 (MGP_SPRETEiJ_G0029373)
Ryukyu mouse	MODERN SPECIES	15	Wipf3 (MGP_CAROLIEiJ_G0028402)	Prr15 (MGP_CAROLIEiJ_G0028401)	Chn2 (MGP_CAROLIEiJ_G0028400) #7	Cpvl (MGP_CAROLIEiJ_G0028399) #8	Tril (MGP_CAROLIEiJ_G0028398) #9	Creb5 (MGP_CAROLIEiJ_G0028397) #10	Jazf1 (MGP_CAROLIEiJ_G0028396) #11	Tax1bp1 (MGP_CAROLIEiJ_G0028395) #12	Hibadh (MGP_CAROLIEiJ_G0028394) #13	Evx1 (MGP_CAROLIEiJ_G0028393) #14	Hoxa13 (MGP_CAROLIEiJ_G0028392) #15	Hoxa11 (MGP_CAROLIEiJ_G0028391) #16	Hoxa10 (MGP_CAROLIEiJ_G0028390) #17	Hoxa9 (MGP_CAROLIEiJ_G0028389) #19	Hoxa7 (MGP_CAROLIEiJ_G0028388) #20	Hoxa5 (MGP_CAROLIEiJ_G0028387) #22	Hoxa4 (MGP_CAROLIEiJ_G0028386) #23	MGP_CAROLIEiJ_G0028385	Hoxa3 (MGP_CAROLIEiJ_G0028384) #24	MGP_CAROLIEiJ_G0028383	Hoxa2 (MGP_CAROLIEiJ_G0028382) #25	Hoxa1 (MGP_CAROLIEiJ_G0028381) #26	Skap2 (MGP_CAROLIEiJ_G0028380) #27	MGP_CAROLIEiJ_G0028379 #29	MGP_CAROLIEiJ_G0028378 ##30	Hnrnpa2b1 (MGP_CAROLIEiJ_G0028377) #31	Nfe2l3 (MGP_CAROLIEiJ_G0028376) #32	Npvf (MGP_CAROLIEiJ_G0028375) #33	4921507P07Rik (MGP_CAROLIEiJ_G0028374) #34	Cycs (MGP_CAROLIEiJ_G0028373) ##35	Osbpl3 (MGP_CAROLIEiJ_G0028372) #37
Shrew mouse	MODERN SPECIES	11	Prr15 (MGP_PahariEiJ_G0022151)	Chn2 (MGP_PahariEiJ_G0022150) #7	Cpvl (MGP_PahariEiJ_G0022149) #8	Tril (MGP_PahariEiJ_G0022148) #9	Creb5 (MGP_PahariEiJ_G0022147) #10	Jazf1 (MGP_PahariEiJ_G0022146) #11	Tax1bp1 (MGP_PahariEiJ_G0022145) #12	Hibadh (MGP_PahariEiJ_G0022144) #13	Evx1 (MGP_PahariEiJ_G0022143) #14	Hoxa13 (MGP_PahariEiJ_G0022142) #15	Hoxa11 (MGP_PahariEiJ_G0022141) #16	Hoxa10 (MGP_PahariEiJ_G0022140) #17	Hoxa9 (MGP_PahariEiJ_G0022139) #19	Hoxa7 (MGP_PahariEiJ_G0022138) #20	Hoxa6 (MGP_PahariEiJ_G0022137) #21	Hoxa5 (MGP_PahariEiJ_G0022136) #22	Hoxa4 (MGP_PahariEiJ_G0022135) #23	Hoxa3 (MGP_PahariEiJ_G0022134) #24	MGP_PahariEiJ_G0022133	Hoxa2 (MGP_PahariEiJ_G0022132) #25	Hoxa1 (MGP_PahariEiJ_G0022131) #26	Skap2 (MGP_PahariEiJ_G0022130) #27	Snx10 (MGP_PahariEiJ_G0022129) #29	MGP_PahariEiJ_G0022128 ##30	Hnrnpa2b1 (MGP_PahariEiJ_G0022127) #31	Nfe2l3 (MGP_PahariEiJ_G0022126) #32	Npvf (MGP_PahariEiJ_G0022125) #33	4921507P07Rik (MGP_PahariEiJ_G0022124) #34	MGP_PahariEiJ_G0022123 ##35	Osbpl3 (MGP_PahariEiJ_G0022122) #37	Gsdme (MGP_PahariEiJ_G0022121)
Rat	MODERN SPECIES	14	ENSRNOG00000068681	Jazf1 (ENSRNOG00000027026) #11	Tax1bp1 (ENSRNOG00000008393) #12	AABR07060591.1 (ENSRNOG00000059195)	ENSRNOG00000043170	ENSRNOG00000033407	Hibadh (ENSRNOG00000008063) #13	Evx1 (ENSRNOG00000046734) #14	Hoxa13 (ENSRNOG00000057061) #15	Hoxa11-as (ENSRNOG00000050564)	Hoxa11 (ENSRNOG00000059870) #16	LOC100911668 (ENSRNOG00000065199) #17	Hoxa9 (ENSRNOG00000064322) #19	Hoxa7 (ENSRNOG00000046361) #20	LOC100911511 (ENSRNOG00000048917) #21	LOC103692127 (ENSRNOG00000047951) #22	Hoxa4 (ENSRNOG00000027365) #23	Hoxa3 (ENSRNOG00000006281) #24	Hoxa2 (ENSRNOG00000005968) #25	Hoxa1 (ENSRNOG00000005628) #26	Skap2 (ENSRNOG00000012228) #27	ENSRNOG00000064847	Snx10 (ENSRNOG00000011944) #29	AABR07060577.1 (ENSRNOG00000015328)	Cbx3 (ENSRNOG00000011814) #30	Hnrnpa2b1 (ENSRNOG00000011175) #31	Nfe2l3 (ENSRNOG00000010886) #32	Cux1-ps1 (ENSRNOG00000065301)	ENSRNOG00000062862	Npvf (ENSRNOG00000010806) #33	LOC500124 (ENSRNOG00000010594) #34
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000154534.b.b	ENSGT01030000234635.a.b.a.a #7	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00940000158311 #16	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37	ENSGT00940000155880	ENSGT00940000158500
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00940000154534.b.b	ENSGT01030000234635.a.b.a.a #7	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255.o #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00940000158311 #16	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.b ##35	ENSGT00940000155957 #37	ENSGT00940000155880	ENSGT00940000158500
Golden Hamster	MODERN SPECIES	822						ENSMAUG00000000426 #12	ENSMAUG00000000446 #13	Evx1 (ENSMAUG00000000608) #14	Hoxa13 (ENSMAUG00000001019) #15	Hoxa11 (ENSMAUG00000001056) #16	Hoxa10 (ENSMAUG00000001122) #17	Hoxa9 (ENSMAUG00000000669) #19	Hoxa7 (ENSMAUG00000001017) #20	Hoxa3 (ENSMAUG00000001129) #24	Hoxa6 (ENSMAUG00000001166) #21	Hoxa5 (ENSMAUG00000002058) #22	ENSMAUG00000002622 #27	Snx10 (ENSMAUG00000003697) #29	ENSMAUG00000004290 ##30	Hnrnpa2b1 (ENSMAUG00000005706) #31	ENSMAUG00000004168	Npvf (ENSMAUG00000006780) #33	4921507P07Rik (ENSMAUG00000007334) #34
Chinese hamster chok1gshd	MODERN SPECIES	212	Chn2 (ENSCGRG00001019164) #7	Cpvl (ENSCGRG00001012752) #8	Tril (ENSCGRG00001006970) #9	Creb5 (ENSCGRG00001018702) #10	ENSCGRG00001012730	Jazf1 (ENSCGRG00001016388) #11	Tax1bp1 (ENSCGRG00001012350) #12	ENSCGRG00001006507 #13	Evx1 (ENSCGRG00001000887) #14	Hoxa13 (ENSCGRG00001017295) #15	Hoxa11 (ENSCGRG00001014980) #16	Hoxa10 (ENSCGRG00001012738) #17	Hoxa9 (ENSCGRG00001007287) #19	Hoxa7 (ENSCGRG00001019884) #20	Hoxa6 (ENSCGRG00001003922) #21	Hoxa5 (ENSCGRG00001001687) #22	Hoxa4 (ENSCGRG00001000481) #23	Hoxa3 (ENSCGRG00001023867) #24	Hoxa2 (ENSCGRG00001019226) #25	Hoxa1 (ENSCGRG00001018306) #26	ENSCGRG00001016005	Skap2 (ENSCGRG00001015578) #27	Snx10 (ENSCGRG00001006115) #29	Cbx3 (ENSCGRG00001024311) #30	Hnrnpa2b1 (ENSCGRG00001022416) #31	Nfe2l3 (ENSCGRG00001020882) #32	Npvf (ENSCGRG00001013575) #33	4921507P07Rik (ENSCGRG00001011704) #34	Cycs (ENSCGRG00001008806) ##35	Osbpl3 (ENSCGRG00001016467) #37	Gsdme (ENSCGRG00001000822)
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT01030000234635.a.b.a.a #7	ENSGT00940000159498 #8	ENSGT00940000161975 #9	ENSGT00940000156420 #10	ENSGT00390000003635 #11	ENSGT00950000183025.b.a #12	ENSGT00940000155255 #13	ENSGT00940000159854 #14	ENSGT00940000162322 #15	ENSGT00940000158311 #16	ENSGT00940000163268 #18	ENSGT00940000162440 #17	ENSGT00940000161864 #19	ENSGT00940000161013 #20	ENSGT00940000161585 #21	ENSGT00940000159894 #22	ENSGT00940000158988.a.a #23	ENSGT00940000159522 #24	ENSGT00940000162533 #25	ENSGT00940000157315 #26	ENSGT00390000017856.a #27	ENSGT00940000156007 #29	ENSGT00940000153305.c.e.b #30	ENSGT00940000154431.e.b #31	ENSGT00950000182892.a.b.b #32	ENSGT00390000003271 #33	ENSGT00390000015236 #34	ENSGT00390000009405.a.a.a.b.a.b.a.a ##35	ENSGT00940000155957 #37	ENSGT00940000155880	ENSGT00940000158500
Northern American deer mouse	MODERN SPECIES	16	Prr15 (ENSPEMG00000022428)	Chn2 (ENSPEMG00000021269) #7	Cpvl (ENSPEMG00000018828) #8	Tril (ENSPEMG00000014631) #9	Creb5 (ENSPEMG00000008456) #10	Jazf1 (ENSPEMG00000013422) #11	Tax1bp1 (ENSPEMG00000030323) #12	Hibadh (ENSPEMG00000004771) #13	Evx1 (ENSPEMG00000000503) #14	Hoxa13 (ENSPEMG00000024341) #15	Hoxa11 (ENSPEMG00000019890) #16	ENSPEMG00000025887 #18	ENSPEMG00000020209 #19	ENSPEMG00000025086	Hoxa6 (ENSPEMG00000030268) #21	Hoxa5 (ENSPEMG00000029029) #22	ENSPEMG00000019740 #23	Hoxa3 (ENSPEMG00000028539) #24	Hoxa2 (ENSPEMG00000019520) #25	Hoxa1 (ENSPEMG00000020130) #26	ENSPEMG00000027861	Skap2 (ENSPEMG00000019639) #27	Snx10 (ENSPEMG00000005121) #29	Cbx3 (ENSPEMG00000020155) #30	Hnrnpa2b1 (ENSPEMG00000014384) #31	Nfe2l3 (ENSPEMG00000030696) #32	Npvf (ENSPEMG00000004324) #33	4921507P07Rik (ENSPEMG00000020256) #34	ENSPEMG00000028008 ##35	Osbpl3 (ENSPEMG00000019801) #37	Gsdme (ENSPEMG00000008779)
Prairie vole	MODERN SPECIES	94	Cwc27 (ENSMOCG00000001833)	Srek1ip1 (ENSMOCG00000018975)	Shisal2b (ENSMOCG00000017631)	ENSMOCG00000000487	Rgs7bp (ENSMOCG00000008886)	Rnf180 (ENSMOCG00000005501)	Htr1a (ENSMOCG00000003283)	Evx1 (ENSMOCG00000001101) #14	Hoxa13 (ENSMOCG00000000460) #15	Hoxa11 (ENSMOCG00000004073) #16	Hoxa10 (ENSMOCG00000011516) #17	Hoxa9 (ENSMOCG00000017667) #19	Hoxa7 (ENSMOCG00000001247) #20	Hoxa3 (ENSMOCG00000004227) #24	Hoxa6 (ENSMOCG00000010245) #21	Hoxa5 (ENSMOCG00000012515) #22	Hoxa4 (ENSMOCG00000011933) #23	ENSMOCG00000016584	Hoxa2 (ENSMOCG00000019225) #25	Hoxa1 (ENSMOCG00000005031) #26	Skap2 (ENSMOCG00000017060) #27	Snx10 (ENSMOCG00000016046) #29	Cbx3 (ENSMOCG00000008087) ##30	Hnrnpa2b1 (ENSMOCG00000009258) #31	Nfe2l3 (ENSMOCG00000011787) #32	Npvf (ENSMOCG00000009097) #33	4921507P07Rik (ENSMOCG00000011632) #34	ENSMOCG00000012702 ##35	ENSMOCG00000018163 #37	Gsdme (ENSMOCG00000018193)	Pals2 (ENSMOCG00000015580)
Lesser Egyptian jerboa	MODERN SPECIES	49	Cpvl (ENSJJAG00000008362) #8	Tril (ENSJJAG00000019712) #9	Creb5 (ENSJJAG00000015436) #10	Jazf1 (ENSJJAG00000023495) #11	ENSJJAG00000023777 #12	Hibadh (ENSJJAG00000008176) #13	Evx1 (ENSJJAG00000022445) #14	ENSJJAG00000016730 #15	Hoxa11 (ENSJJAG00000018070) #16	ENSJJAG00000013637 #18	ENSJJAG00000020521 #17	Hoxa9 (ENSJJAG00000003182) #19	Hoxa7 (ENSJJAG00000001940) #20	Hoxa3 (ENSJJAG00000014001) #24	Hoxa6 (ENSJJAG00000017936) #21	Hoxa5 (ENSJJAG00000011757) #22	ENSJJAG00000021517 #23	Hoxa2 (ENSJJAG00000021712) #25	Hoxa1 (ENSJJAG00000023032) #26	Skap2 (ENSJJAG00000009704) #27	Snx10 (ENSJJAG00000010400) #29	ENSJJAG00000014919	ENSJJAG00000018731 #30	Nfe2l3 (ENSJJAG00000013672) #32	Npvf (ENSJJAG00000023289) #33	4921507P07Rik (ENSJJAG00000011772) #34	ENSJJAG00000004363 ##35	ENSJJAG00000016917	Osbpl3 (ENSJJAG00000017704) #37	ENSJJAG00000023312	Pals2 (ENSJJAG00000001765)