Gnathostomata ANCESTRAL SPECIES 67 ENSGT00760000119737 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305 #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00940000165630 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 Euteleostomi ANCESTRAL SPECIES 22 ENSGT00940000160267 #8 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000155261 ENSGT00940000157981.b ENSGT00950000183025.b.b ##13 ENSGT00940000161087 ENSGT00940000161307 ENSGT00940000160009 ENSGT00940000160855 ENSGT00940000160866 ENSGT00940000161194 ENSGT00940000159254 ENSGT00940000161023 ENSGT00940000160794 ENSGT00940000159522 #24 ENSGT00940000158988.a.a #23 ENSGT00390000004897 Sarcopterygii ANCESTRAL SPECIES ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00940000171365 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305 #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000155348.A Tetrapoda ANCESTRAL SPECIES 7 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305 #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Amniota ANCESTRAL SPECIES 7 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000164628 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Mammalia ANCESTRAL SPECIES 4 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Theria ANCESTRAL SPECIES ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 Primates ANCESTRAL SPECIES 12 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007.c #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Lemuriformes ANCESTRAL SPECIES 4 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007.c #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Lemuriformes_a ANCESTRAL SPECIES 66 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007.c #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b.a ##35 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Coquerels sifaka MODERN SPECIES 205 SCRN1 (ENSPCOG00000016737) #7 WIPF3 (ENSPCOG00000014419) #8 CHN2 (ENSPCOG00000016056) #9 CPVL (ENSPCOG00000028457) #10 CREB5 (ENSPCOG00000023261) #11 JAZF1 (ENSPCOG00000021884) #12 TAX1BP1 (ENSPCOG00000026109) #13 HIBADH (ENSPCOG00000013985) #14 EVX1 (ENSPCOG00000024268) #15 HOXA13 (ENSPCOG00000019940) #16 HOXA11 (ENSPCOG00000019148) #17 HOXA10 (ENSPCOG00000015186) #18 HOXA9 (ENSPCOG00000019455) #19 HOXA7 (ENSPCOG00000018610) #20 HOXA6 (ENSPCOG00000019088) #21 HOXA5 (ENSPCOG00000020367) #22 HOXA4 (ENSPCOG00000008248) #23 HOXA3 (ENSPCOG00000025444) #24 HOXA2 (ENSPCOG00000008813) #25 HOXA1 (ENSPCOG00000025369) #26 ENSPCOG00000023631 #27 SKAP2 (ENSPCOG00000000688) #28 SNX10 (ENSPCOG00000023211) #29 ENSPCOG00000006764 #30 HNRNPA2B1 (ENSPCOG00000026324) #31 ENSPCOG00000024982 #32 NPVF (ENSPCOG00000023274) #33 C7orf31 (ENSPCOG00000018021) #34 ENSPCOG00000026330 #35 OSBPL3 (ENSPCOG00000028107) #36 GSDME (ENSPCOG00000018584) #37 Greater bamboo lemur MODERN SPECIES 586 PRR15 (ENSPSMG00000015605) CHN2 (ENSPSMG00000015549) #9 CPVL (ENSPSMG00000015408) #10 TRIL (ENSPSMG00000015395) CREB5 (ENSPSMG00000015364) #11 TAX1BP1 (ENSPSMG00000015046) #13 HIBADH (ENSPSMG00000014819) #14 EVX1 (ENSPSMG00000014785) #15 HOXA13 (ENSPSMG00000014769) #16 HOXA11 (ENSPSMG00000014731) #17 ENSPSMG00000014718 ENSPSMG00000014712 HOXA9 (ENSPSMG00000014704) #19 HOXA7 (ENSPSMG00000014695) #20 HOXA6 (ENSPSMG00000014685) #21 HOXA5 (ENSPSMG00000014678) #22 HOXA3 (ENSPSMG00000014673) #24 HOXA2 (ENSPSMG00000014668) #25 HOXA1 (ENSPSMG00000014634) #26 SKAP2 (ENSPSMG00000014602) #28 SNX10 (ENSPSMG00000014541) #29 ENSPSMG00000014512 ##30 HNRNPA2B1 (ENSPSMG00000014452) ##31 NFE2L3 (ENSPSMG00000014366) #32 NPVF (ENSPSMG00000014349) #33 C7orf31 (ENSPSMG00000014334) #34 ENSPSMG00000014288 ##35 ENSPSMG00000014277 OSBPL3 (ENSPSMG00000014087) #36 GSDME (ENSPSMG00000013865) #37 PALS2 (ENSPSMG00000013808) Mouse lemur MODERN SPECIES 2 FKBP14 (ENSMICG00000036409) SCRN1 (ENSMICG00000012191) #7 WIPF3 (ENSMICG00000012182) #8 CHN2 (ENSMICG00000008142) #9 CPVL (ENSMICG00000037854) #10 CREB5 (ENSMICG00000007967) #11 JAZF1 (ENSMICG00000009941) #12 TAX1BP1 (ENSMICG00000009923) #13 ENSMICG00000045251 EVX1 (ENSMICG00000031887) #15 HOXA13 (ENSMICG00000043155) #16 HOXA11 (ENSMICG00000033824) #17 HOXA10 (ENSMICG00000027113) #18 HOXA9 (ENSMICG00000045382) #19 HOXA7 (ENSMICG00000028330) #20 HOXA5 (ENSMICG00000046770) #22 ENSMICG00000046352 HOXA3 (ENSMICG00000030351) #24 HOXA2 (ENSMICG00000047950) #25 HOXA1 (ENSMICG00000041792) #26 ENSMICG00000030368 #27 SKAP2 (ENSMICG00000000466) #28 SNX10 (ENSMICG00000036618) #29 CBX3 (ENSMICG00000033535) ##30 ENSMICG00000030570 ##31 NFE2L3 (ENSMICG00000032091) #32 NPVF (ENSMICG00000000759) #33 C7orf31 (ENSMICG00000000758) #34 ENSMICG00000045862 #35 OSBPL3 (ENSMICG00000000756) #36 GSDME (ENSMICG00000000755) #37 Bushbaby MODERN SPECIES 143 PRR15 (ENSOGAG00000026096) CHN2 (ENSOGAG00000005418) #9 CPVL (ENSOGAG00000000026) #10 TRIL (ENSOGAG00000033323) CREB5 (ENSOGAG00000010246) #11 JAZF1 (ENSOGAG00000029759) #12 TAX1BP1 (ENSOGAG00000000427) #13 HIBADH (ENSOGAG00000000425) #14 EVX1 (ENSOGAG00000031221) #15 HOXA13 (ENSOGAG00000028983) #16 HOXA11 (ENSOGAG00000012389) #17 HOXA10 (ENSOGAG00000012385) #18 HOXA9 (ENSOGAG00000015000) #19 HOXA7 (ENSOGAG00000032482) #20 HOXA6 (ENSOGAG00000012384) #21 HOXA5 (ENSOGAG00000031153) #22 HOXA4 (ENSOGAG00000028670) #23 HOXA3 (ENSOGAG00000027664) #24 HOXA2 (ENSOGAG00000012372) #25 HOXA1 (ENSOGAG00000012370) #26 SKAP2 (ENSOGAG00000012366) #28 ENSOGAG00000004065 ##29 ENSOGAG00000016583 #30 ENSOGAG00000015353 ##31 NFE2L3 (ENSOGAG00000015349) #32 C7orf31 (ENSOGAG00000015803) #34 OSBPL3 (ENSOGAG00000003401) #36 GSDME (ENSOGAG00000003400) #37 PALS2 (ENSOGAG00000003397) NPY (ENSOGAG00000024572) STK31 (ENSOGAG00000013559) Haplorrhini ANCESTRAL SPECIES 8 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 Simiiformes ANCESTRAL SPECIES 12 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00860000135709 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 Platyrrhini ANCESTRAL SPECIES 10 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00860000135709 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Cebidae ANCESTRAL SPECIES 9 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00860000135709 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Marmoset MODERN SPECIES 20 ENSCJAG00000041938 ENSCJAG00000070066 ENSCJAG00000072346 ENSCJAG00000071766 ENSCJAG00000034676 HIBADH (ENSCJAG00000008204) #14 ENSCJAG00000081017 ENSCJAG00000081981 EVX1 (ENSCJAG00000008197) #15 HOXA13 (ENSCJAG00000008192) #16 HOXA11 (ENSCJAG00000008187) #17 HOXA10 (ENSCJAG00000081224) #18 HOXA9 (ENSCJAG00000038531) #19 HOXA7 (ENSCJAG00000080800) #20 HOXA6 (ENSCJAG00000077854) #21 HOXA5 (ENSCJAG00000047690) #22 HOXA4 (ENSCJAG00000008058) #23 HOXA3 (ENSCJAG00000043202) #24 HOXA2 (ENSCJAG00000008032) #25 HOXA1 (ENSCJAG00000008024) #26 ENSCJAG00000080948 ENSCJAG00000074413 ENSCJAG00000072929 SKAP2 (ENSCJAG00000007979) #28 SNX10 (ENSCJAG00000060087) #29 CBX3 (ENSCJAG00000007952) ##30 HNRNPA2B1 (ENSCJAG00000007908) ##31 NFE2L3 (ENSCJAG00000007897) #32 ENSCJAG00000087067 ENSCJAG00000075759 ENSCJAG00000084957 Cebidae_a ANCESTRAL SPECIES 7 ENSGT00940000160267 #8 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT01090000260040.b.b.b.b.b ENSGT00390000015236 #34 ENSGT00390000009405.b.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Capuchin MODERN SPECIES 45 CREB5 (ENSCCAG00000028715) #11 JAZF1 (ENSCCAG00000025827) #12 TAX1BP1 (ENSCCAG00000032690) #13 ENSCCAG00000019760 ENSCCAG00000025275 HIBADH (ENSCCAG00000020606) #14 ENSCCAG00000037634 ENSCCAG00000029237 EVX1 (ENSCCAG00000030309) #15 HOXA13 (ENSCCAG00000028264) #16 HOXA11 (ENSCCAG00000035880) #17 HOXA10 (ENSCCAG00000034574) #18 HOXA9 (ENSCCAG00000029541) #19 HOXA7 (ENSCCAG00000024332) #20 HOXA6 (ENSCCAG00000010092) #21 HOXA5 (ENSCCAG00000029402) #22 HOXA4 (ENSCCAG00000027072) #23 HOXA3 (ENSCCAG00000023332) #24 HOXA2 (ENSCCAG00000027236) #25 HOXA1 (ENSCCAG00000023769) #26 SKAP2 (ENSCCAG00000034754) #28 SNX10 (ENSCCAG00000029733) #29 CBX3 (ENSCCAG00000027804) ##30 HNRNPA2B1 (ENSCCAG00000029074) ##31 NFE2L3 (ENSCCAG00000031243) #32 ENSCCAG00000022491 NPVF (ENSCCAG00000030493) #33 ENSCCAG00000020933 C7orf31 (ENSCCAG00000003818) #34 ENSCCAG00000026670 ##35 OSBPL3 (ENSCCAG00000037568) #36 Bolivian squirrel monkey MODERN SPECIES 112 CHN2 (ENSSBOG00000023305) #9 CPVL (ENSSBOG00000021419) #10 TRIL (ENSSBOG00000017304) CREB5 (ENSSBOG00000019829) #11 ENSSBOG00000018196 JAZF1 (ENSSBOG00000031260) #12 TAX1BP1 (ENSSBOG00000021153) #13 HIBADH (ENSSBOG00000032980) #14 EVX1 (ENSSBOG00000017478) #15 HOXA13 (ENSSBOG00000024071) #16 HOXA11 (ENSSBOG00000020434) #17 HOXA10 (ENSSBOG00000033844) #18 HOXA9 (ENSSBOG00000033572) #19 HOXA7 (ENSSBOG00000023282) #20 HOXA6 (ENSSBOG00000026859) #21 HOXA5 (ENSSBOG00000027127) #22 ENSSBOG00000026625 #23 HOXA3 (ENSSBOG00000031444) #24 HOXA2 (ENSSBOG00000024057) #25 HOXA1 (ENSSBOG00000022017) #26 ENSSBOG00000035175 SKAP2 (ENSSBOG00000022367) #28 SNX10 (ENSSBOG00000026009) #29 ENSSBOG00000029159 ##30 HNRNPA2B1 (ENSSBOG00000005245) ##31 NFE2L3 (ENSSBOG00000028975) #32 ENSSBOG00000028454 ENSSBOG00000027366 NPVF (ENSSBOG00000020608) #33 ENSSBOG00000027136 C7orf31 (ENSSBOG00000030318) #34 Mas night monkey MODERN SPECIES 442 CHN2 (ENSANAG00000027184) #9 CPVL (ENSANAG00000021215) #10 TRIL (ENSANAG00000019308) CREB5 (ENSANAG00000013719) #11 JAZF1 (ENSANAG00000034509) #12 ENSANAG00000030652 ENSANAG00000028050 #13 HIBADH (ENSANAG00000025352) #14 EVX1 (ENSANAG00000030322) #15 HOXA13 (ENSANAG00000027275) #16 HOXA11 (ENSANAG00000023241) #17 HOXA10 (ENSANAG00000024989) #18 HOXA9 (ENSANAG00000027317) #19 HOXA7 (ENSANAG00000033107) #20 HOXA6 (ENSANAG00000021101) #21 HOXA5 (ENSANAG00000034612) #22 HOXA4 (ENSANAG00000036216) #23 HOXA3 (ENSANAG00000021432) #24 HOXA2 (ENSANAG00000025238) #25 HOXA1 (ENSANAG00000037615) #26 ENSANAG00000025984 SKAP2 (ENSANAG00000029886) #28 SNX10 (ENSANAG00000021914) #29 CBX3 (ENSANAG00000022611) ##30 ENSANAG00000033016 ##31 NFE2L3 (ENSANAG00000027774) #32 NPVF (ENSANAG00000035252) #33 C7orf31 (ENSANAG00000027077) #34 ENSANAG00000033583 ENSANAG00000028593 ##35 ENSANAG00000033111 Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00860000135709 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.c.a.a ##35 Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000163122 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.c.a.a.d.b ##35 ENSGT00940000155957 #36 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000156420 #11 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000163122 ENSGT00940000155255 #14 ENSGT00420000029792.r ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.c.a.a.d.b ##35 ENSGT00940000155957 #36 Vervet Monkey MODERN SPECIES 13 PRR15 (ENSCSAG00000019606) CHN2 (ENSCSAG00000014413) #9 CPVL (ENSCSAG00000014372) #10 CREB5 (ENSCSAG00000014360) #11 JAZF1 (ENSCSAG00000014355) #12 TAX1BP1 (ENSCSAG00000014348) #13 HIBADH (ENSCSAG00000014337) #14 ENSCSAG00000019607 EVX1 (ENSCSAG00000014325) #15 HOXA13 (ENSCSAG00000014315) #16 HOXA11 (ENSCSAG00000014310) #17 ENSCSAG00000014302 HOXA9 (ENSCSAG00000014297) #19 HOXA7 (ENSCSAG00000014292) #20 HOXA6 (ENSCSAG00000014287) #21 HOXA5 (ENSCSAG00000014278) #22 HOXA4 (ENSCSAG00000014273) #23 HOXA3 (ENSCSAG00000014267) #24 HOXA2 (ENSCSAG00000014262) #25 HOXA1 (ENSCSAG00000014256) #26 SKAP2 (ENSCSAG00000014230) #28 ENSCSAG00000014193 SNX10 (ENSCSAG00000014190) #29 CBX3 (ENSCSAG00000014185) ##30 ENSCSAG00000014175 ##31 NFE2L3 (ENSCSAG00000014168) #32 NPVF (ENSCSAG00000014160) #33 C7orf31 (ENSCSAG00000014149) #34 OSBPL3 (ENSCSAG00000014122) #36 GSDME (ENSCSAG00000014114) #37 PALS2 (ENSCSAG00000014108) Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00860000135709 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000163122 ENSGT00940000155255 #14 ENSGT00420000029792.r ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00940000153395.a.rb.b.b.a ENSGT00940000167156 ENSGT01030000234542.b.a.a.a.b.a.b.c.a ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 Macaca ANCESTRAL SPECIES 3 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00860000135709 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000163122 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00940000153395.a.rb.b.b.a ENSGT00940000167156 ENSGT01030000234542.b.a.a.a.b.a.b.c.a ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 Pig-tailed macaque MODERN SPECIES 534 CPVL (ENSMNEG00000031185) #10 TRIL (ENSMNEG00000004465) CREB5 (ENSMNEG00000034055) #11 ENSMNEG00000028508 JAZF1 (ENSMNEG00000035073) #12 TAX1BP1 (ENSMNEG00000030958) #13 ENSMNEG00000043622 HIBADH (ENSMNEG00000031307) #14 EVX1 (ENSMNEG00000029237) #15 HOXA13 (ENSMNEG00000043469) #16 HOXA11 (ENSMNEG00000030730) #17 HOXA10 (ENSMNEG00000032276) #18 HOXA9 (ENSMNEG00000035910) #19 HOXA7 (ENSMNEG00000013840) #20 HOXA6 (ENSMNEG00000013443) #21 HOXA5 (ENSMNEG00000041820) #22 HOXA4 (ENSMNEG00000038108) #23 HOXA3 (ENSMNEG00000045278) #24 HOXA2 (ENSMNEG00000028148) #25 HOXA1 (ENSMNEG00000043463) #26 ENSMNEG00000027963 ENSMNEG00000040022 ENSMNEG00000045177 SKAP2 (ENSMNEG00000029161) #28 ENSMNEG00000001360 ENSMNEG00000027968 SNX10 (ENSMNEG00000032503) #29 ENSMNEG00000039531 #30 HNRNPA2B1 (ENSMNEG00000029148) ##31 NFE2L3 (ENSMNEG00000040959) #32 ENSMNEG00000011490 Macaca_a ANCESTRAL SPECIES 7 ENSGT01100000263493.a.b.b.a.a.b.b.a.a.a.a.a.a.b.b.b ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00860000135709 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00940000153395.a.rb.b.b.a ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.c.a.a.d.b.b.a.a.a ##35 ENSGT00980000199842.C.a.b ENSGT00940000155957 #36 Rhesus MODERN SPECIES 13 CPVL (ENSMMUG00000020184) #10 TRIL (ENSMMUG00000020183) CREB5 (ENSMMUG00000039317) #11 ENSMMUG00000046993 JAZF1 (ENSMMUG00000042360) #12 TAX1BP1 (ENSMMUG00000022454) #13 HIBADH (ENSMMUG00000023134) #14 ENSMMUG00000037517 EVX1 (ENSMMUG00000056313) #15 HOXA13 (ENSMMUG00000013463) #16 HOXA11 (ENSMMUG00000055708) #17 HOXA10 (ENSMMUG00000051571) #18 HOXA9 (ENSMMUG00000013459) #19 HOXA7 (ENSMMUG00000013458) #20 HOXA6 (ENSMMUG00000061724) #21 HOXA5 (ENSMMUG00000061471) #22 HOXA4 (ENSMMUG00000040874) #23 HOXA3 (ENSMMUG00000051572) #24 HOXA2 (ENSMMUG00000054649) #25 HOXA1 (ENSMMUG00000012807) #26 SKAP2 (ENSMMUG00000018544) #28 SNX10 (ENSMMUG00000023230) #29 CBX3 (ENSMMUG00000040322) ##30 HNRNPA2B1 (ENSMMUG00000003619) ##31 NFE2L3 (ENSMMUG00000003615) #32 NPVF (ENSMMUG00000008369) #33 C3H7orf31 (ENSMMUG00000005701) #34 CYCS (ENSMMUG00000051205) ##35 ENSMMUG00000064777 OSBPL3 (ENSMMUG00000016939) #36 GSDME (ENSMMUG00000016938) #37 Crab-eating macaque MODERN SPECIES 13 TRIL (ENSMFAG00000028905) CREB5 (ENSMFAG00000037539) #11 ENSMFAG00000047227 JAZF1 (ENSMFAG00000034641) #12 TAX1BP1 (ENSMFAG00000034182) #13 HIBADH (ENSMFAG00000035636) #14 ENSMFAG00000060028 ENSMFAG00000053283 EVX1 (ENSMFAG00000056940) #15 HOXA13 (ENSMFAG00000039716) #16 HOXA11 (ENSMFAG00000044467) #17 HOXA10 (ENSMFAG00000000953) #18 HOXA9 (ENSMFAG00000041407) #19 HOXA7 (ENSMFAG00000058004) #20 HOXA6 (ENSMFAG00000030075) #21 HOXA5 (ENSMFAG00000061184) #22 HOXA4 (ENSMFAG00000038265) #23 HOXA3 (ENSMFAG00000053957) #24 HOXA2 (ENSMFAG00000040635) #25 HOXA1 (ENSMFAG00000034381) #26 ENSMFAG00000025170 SKAP2 (ENSMFAG00000041066) #28 SNX10 (ENSMFAG00000000672) #29 CBX3 (ENSMFAG00000000399) ##30 HNRNPA2B1 (ENSMFAG00000002536) ##31 NFE2L3 (ENSMFAG00000031568) #32 NPVF (ENSMFAG00000033164) #33 C7orf31 (ENSMFAG00000043369) #34 ENSMFAG00000050012 ##35 ENSMFAG00000047292 OSBPL3 (ENSMFAG00000045859) #36 Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000163122 ENSGT00940000155255 #14 ENSGT00420000029792.r ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00940000153395.a.rb.b.b.a ENSGT00940000167156 ENSGT01030000234542.b.a.a.a.b.a.b.c.a ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 Olive baboon MODERN SPECIES 14 CREB5 (ENSPANG00000025914) #11 ENSPANG00000045027 ENSPANG00000044199 JAZF1 (ENSPANG00000006254) #12 TAX1BP1 (ENSPANG00000025183) #13 HIBADH (ENSPANG00000007147) #14 ENSPANG00000037608 SNX6 (ENSPANG00000045776) EVX1 (ENSPANG00000010753) #15 HOXA13 (ENSPANG00000030952) #16 HOXA11 (ENSPANG00000026298) #17 HOXA10 (ENSPANG00000021024) HOXA9 (ENSPANG00000025913) #19 HOXA7 (ENSPANG00000029246) #20 HOXA6 (ENSPANG00000013799) #21 HOXA5 (ENSPANG00000009594) #22 HOXA4 (ENSPANG00000045376) #23 HOXA3 (ENSPANG00000025912) #24 HOXA2 (ENSPANG00000015067) #25 HOXA1 (ENSPANG00000003403) #26 MAD2L1 (ENSPANG00000004063) SKAP2 (ENSPANG00000006185) #28 SNX10 (ENSPANG00000006089) #29 ENSPANG00000031037 ##30 HNRNPA2B1 (ENSPANG00000021598) ##31 NFE2L3 (ENSPANG00000013687) #32 NPVF (ENSPANG00000008672) #33 C7orf31 (ENSPANG00000045080) #34 ENSPANG00000050044 ##35 ENSPANG00000041877 ENSPANG00000047289 Cercopithecinae_d ANCESTRAL SPECIES 10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000163122 ENSGT00940000155255 #14 ENSGT00420000029792.r ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00940000153395.a.rb.b.b.a ENSGT00940000167156 ENSGT01030000234542.b.a.a.a.b.a.b.c.a ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 Sooty mangabey MODERN SPECIES 98 CPVL (ENSCATG00000000641) #10 TRIL (ENSCATG00000017105) CREB5 (ENSCATG00000039237) #11 JAZF1 (ENSCATG00000039839) #12 TAX1BP1 (ENSCATG00000040940) #13 ENSCATG00000040606 HIBADH (ENSCATG00000041726) #14 ENSCATG00000000896 EVX1 (ENSCATG00000040260) #15 HOXA13 (ENSCATG00000037385) #16 ENSCATG00000034918 HOXA11 (ENSCATG00000001552) #17 HOXA10 (ENSCATG00000044959) #18 HOXA9 (ENSCATG00000042075) #19 HOXA6 (ENSCATG00000035243) #21 HOXA5 (ENSCATG00000043876) #22 HOXA7 (ENSCATG00000032186) #20 HOXA4 (ENSCATG00000029977) #23 HOXA3 (ENSCATG00000035121) #24 HOXA2 (ENSCATG00000033672) #25 HOXA1 (ENSCATG00000034436) #26 ENSCATG00000036904 ENSCATG00000033949 ENSCATG00000012253 SKAP2 (ENSCATG00000015604) #28 ENSCATG00000044879 ENSCATG00000044832 SNX10 (ENSCATG00000044201) #29 ENSCATG00000007882 ##30 HNRNPA2B1 (ENSCATG00000033325) ##31 NFE2L3 (ENSCATG00000040425) #32 Drill MODERN SPECIES 322 CPVL (ENSMLEG00000041505) #10 TRIL (ENSMLEG00000032070) CREB5 (ENSMLEG00000039039) #11 JAZF1 (ENSMLEG00000036373) #12 TAX1BP1 (ENSMLEG00000014126) #13 ENSMLEG00000035158 HIBADH (ENSMLEG00000029648) #14 ENSMLEG00000015804 EVX1 (ENSMLEG00000036235) #15 ENSMLEG00000005797 #16 HOXA11 (ENSMLEG00000036444) #17 HOXA10 (ENSMLEG00000040709) #18 HOXA9 (ENSMLEG00000044371) #19 HOXA7 (ENSMLEG00000043725) #20 HOXA6 (ENSMLEG00000043981) #21 HOXA5 (ENSMLEG00000032881) #22 HOXA3 (ENSMLEG00000039968) #24 ENSMLEG00000033218 #23 HOXA2 (ENSMLEG00000028127) #25 HOXA1 (ENSMLEG00000035357) #26 ENSMLEG00000029093 ENSMLEG00000044382 SKAP2 (ENSMLEG00000044388) #28 ENSMLEG00000041406 ENSMLEG00000044195 SNX10 (ENSMLEG00000017869) #29 CBX3 (ENSMLEG00000043394) ##30 HNRNPA2B1 (ENSMLEG00000040848) ##31 NFE2L3 (ENSMLEG00000030644) #32 Rhinopithecus ANCESTRAL SPECIES 285 ENSGT00910000148091 ENSGT00390000018173.p ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000163122 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00940000153395.a.rb.b Black snub-nosed monkey MODERN SPECIES 683 CREB5 (ENSRBIG00000039541) #11 ENSRBIG00000031592 ENSRBIG00000041655 JAZF1 (ENSRBIG00000028304) #12 TAX1BP1 (ENSRBIG00000033739) #13 ENSRBIG00000037865 ENSRBIG00000023649 #14 EVX1 (ENSRBIG00000034400) #15 HOXA11 (ENSRBIG00000005197) #17 HOXA10 (ENSRBIG00000031294) #18 HOXA9 (ENSRBIG00000038074) #19 HOXA7 (ENSRBIG00000011060) #20 HOXA6 (ENSRBIG00000028174) #21 HOXA5 (ENSRBIG00000036351) #22 ENSRBIG00000041474 #23 HOXA3 (ENSRBIG00000029100) #24 HOXA2 (ENSRBIG00000010605) #25 HOXA1 (ENSRBIG00000038056) #26 Golden snub-nosed monkey MODERN SPECIES 2662 CREB5 (ENSRROG00000032841) #11 ENSRROG00000037287 ENSRROG00000032194 ENSRROG00000030778 JAZF1 (ENSRROG00000034561) #12 TAX1BP1 (ENSRROG00000039650) #13 ENSRROG00000037969 HIBADH (ENSRROG00000019528) #14 EVX1 (ENSRROG00000044650) #15 HOXA13 (ENSRROG00000033374) #16 HOXA11 (ENSRROG00000030206) #17 HOXA10 (ENSRROG00000035720) #18 HOXA9 (ENSRROG00000027298) #19 HOXA7 (ENSRROG00000031603) #20 HOXA6 (ENSRROG00000036583) #21 HOXA5 (ENSRROG00000027924) #22 ENSRROG00000038872 #23 HOXA3 (ENSRROG00000037793) #24 HOXA2 (ENSRROG00000043307) #25 HOXA1 (ENSRROG00000042817) #26 ENSRROG00000015544 ENSRROG00000044295 ENSRROG00000034808 Hominoidea ANCESTRAL SPECIES 6 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b.c #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.c.a.a.b.a ##35 Hominidae ANCESTRAL SPECIES 11 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b.c #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.c.a.a.b.a ##35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 25 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00410000028196 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00390000003635 #12 ENSGT00950000183025.b.a.o #13 ENSGT00940000155255 #14 ENSGT00390000016384.f.j.b ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b.c #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.c.a.a.b.a ##35 ENSGT00940000155957 #36 Homo/Pan group ANCESTRAL SPECIES 24 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00410000028196 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00390000003635 #12 ENSGT00950000183025.b.a.o #13 ENSGT00940000155255 #14 ENSGT00390000016384.f.j.b ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b.c #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.c.a.a.b.a ##35 ENSGT00940000155957 #36 Pan ANCESTRAL SPECIES 25 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00410000028196 ENSGT00950000183087.A.a.b.a.g.b.b ENSGT00390000003635 #12 ENSGT00950000183025.b.a.o #13 ENSGT00940000155255 #14 ENSGT00390000016384.f.j.b ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT01030000234542.b.a.a.a.b.a.b.c.a.b ENSGT00940000153299.c.b.a.b.a.a.a ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b.c #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 586 ENSPTRG00000049297 #13 ENSPTRG00000042926 #14 ENSPTRG00000046220 ENSPTRG00000048607 #15 ENSPTRG00000050384 #16 ENSPTRG00000047456 #17 ENSPTRG00000052537 #18 ENSPTRG00000047890 #19 ENSPTRG00000047796 #20 ENSPTRG00000049275 #21 ENSPTRG00000048699 #22 ENSPTRG00000048614 #23 ENSPTRG00000047399 #24 ENSPTRG00000052389 #25 ENSPTRG00000048196 #26 ENSPTRG00000050430 ENSPTRG00000045640 ENSPTRG00000047411 Chimpanzee MODERN SPECIES 20 TRIL (ENSPTRG00000043675) ENSPTRG00000050877 CREB5 (ENSPTRG00000019028) #11 ENSPTRG00000045009 JAZF1 (ENSPTRG00000019027) #12 TAX1BP1 (ENSPTRG00000019025) #13 HIBADH (ENSPTRG00000019024) #14 ENSPTRG00000052529 EVX1 (ENSPTRG00000019022) #15 HOXA13 (ENSPTRG00000028643) #16 HOXA11 (ENSPTRG00000019020) #17 HOXA10 (ENSPTRG00000019019) #18 ENSPTRG00000049485 #19 HOXA7 (ENSPTRG00000019017) #20 HOXA6 (ENSPTRG00000039535) #21 ENSPTRG00000019015 #22 HOXA4 (ENSPTRG00000023597) #23 HOXA3 (ENSPTRG00000019012) #24 HOXA2 (ENSPTRG00000019011) #25 HOXA1 (ENSPTRG00000019010) #26 ENSPTRG00000049011 ENSPTRG00000044997 ENSPTRG00000049392 SKAP2 (ENSPTRG00000019007) #28 ENSPTRG00000039177 ENSPTRG00000019006 SNX10 (ENSPTRG00000019004) #29 CBX3 (ENSPTRG00000019003) #30 HNRNPA2B1 (ENSPTRG00000019002) ##31 NFE2L3 (ENSPTRG00000019000) #32 NPVF (ENSPTRG00000018998) #33 Bonobo MODERN SPECIES 20 TRIL (ENSPPAG00000024310) ENSPPAG00000037283 CREB5 (ENSPPAG00000030641) #11 ENSPPAG00000038768 JAZF1 (ENSPPAG00000036331) #12 TAX1BP1 (ENSPPAG00000022824) #13 HIBADH (ENSPPAG00000042554) #14 ENSPPAG00000036088 EVX1 (ENSPPAG00000024119) #15 ENSPPAG00000043323 #16 HOXA11 (ENSPPAG00000038132) #17 HOXA10 (ENSPPAG00000028221) #18 HOXA9 (ENSPPAG00000030004) #19 HOXA7 (ENSPPAG00000034362) #20 HOXA6 (ENSPPAG00000039975) #21 HOXA5 (ENSPPAG00000044047) #22 ENSPPAG00000043774 #23 HOXA3 (ENSPPAG00000032603) #24 HOXA2 (ENSPPAG00000035694) #25 HOXA1 (ENSPPAG00000000155) #26 ENSPPAG00000038834 ENSPPAG00000000147 ENSPPAG00000033310 SKAP2 (ENSPPAG00000030605) #28 ENSPPAG00000028025 ENSPPAG00000027824 SNX10 (ENSPPAG00000038529) #29 CBX3 (ENSPPAG00000040392) ##30 HNRNPA2B1 (ENSPPAG00000037520) ##31 NFE2L3 (ENSPPAG00000027421) #32 NPVF (ENSPPAG00000010942) #33 Human MODERN SPECIES 19 CHN2 (ENSG00000106069) #9 CPVL (ENSG00000106066) #10 TRIL (ENSG00000255690) CREB5 (ENSG00000146592) #11 JAZF1 (ENSG00000153814) #12 TAX1BP1 (ENSG00000106052) #13 HIBADH (ENSG00000106049) #14 EVX1 (ENSG00000106038) #15 HOXA13 (ENSG00000106031) #16 HOXA11 (ENSG00000005073) #17 HOXA10 (ENSG00000253293) #18 ENSG00000257184 HOXA9 (ENSG00000078399) #19 HOXA7 (ENSG00000122592) #20 HOXA6 (ENSG00000106006) #21 HOXA5 (ENSG00000106004) #22 HOXA4 (ENSG00000197576) #23 HOXA3 (ENSG00000105997) #24 HOXA2 (ENSG00000105996) #25 HOXA1 (ENSG00000105991) #26 SKAP2 (ENSG00000005020) #28 SNX10 (ENSG00000086300) #29 CBX3 (ENSG00000122565) ##30 HNRNPA2B1 (ENSG00000122566) #31 NFE2L3 (ENSG00000050344) #32 NPVF (ENSG00000105954) #33 C7orf31 (ENSG00000153790) #34 CYCS (ENSG00000172115) ##35 OSBPL3 (ENSG00000070882) #36 GSDME (ENSG00000105928) #37 PALS2 (ENSG00000105926) Gorilla MODERN SPECIES 20 TRIL (ENSGGOG00000026471) ENSGGOG00000024472 CREB5 (ENSGGOG00000043819) #11 ENSGGOG00000026228 JAZF1 (ENSGGOG00000011408) #12 TAX1BP1 (ENSGGOG00000022253) #13 HIBADH (ENSGGOG00000013267) #14 ENSGGOG00000026869 EVX1 (ENSGGOG00000016143) #15 ENSGGOG00000005309 #16 HOXA11 (ENSGGOG00000002226) #17 HOXA10 (ENSGGOG00000002225) #18 HOXA9 (ENSGGOG00000002222) #19 HOXA7 (ENSGGOG00000002220) #20 HOXA6 (ENSGGOG00000002218) #21 HOXA5 (ENSGGOG00000002217) #22 ENSGGOG00000002215 #23 HOXA3 (ENSGGOG00000002213) #24 HOXA2 (ENSGGOG00000002211) #25 HOXA1 (ENSGGOG00000002209) #26 ENSGGOG00000027198 ENSGGOG00000012668 ENSGGOG00000027139 SKAP2 (ENSGGOG00000002146) #28 ENSGGOG00000027200 ENSGGOG00000011876 SNX10 (ENSGGOG00000003419) #29 CBX3 (ENSGGOG00000025853) ##30 HNRNPA2B1 (ENSGGOG00000017072) ##31 NFE2L3 (ENSGGOG00000025881) #32 NPVF (ENSGGOG00000011997) #33 Orangutan MODERN SPECIES 20 CHN2 (ENSPPYG00000017686) #9 CPVL (ENSPPYG00000017687) #10 TRIL (ENSPPYG00000032123) CREB5 (ENSPPYG00000017688) #11 JAZF1 (ENSPPYG00000017691) #12 ENSPPYG00000034672 #12 TAX1BP1 (ENSPPYG00000017692) #13 HIBADH (ENSPPYG00000017693) #14 EVX1 (ENSPPYG00000017696) #15 HOXA13 (ENSPPYG00000017697) #16 HOXA11 (ENSPPYG00000017698) #17 ENSPPYG00000039324 HOXA9 (ENSPPYG00000032755) #19 HOXA7 (ENSPPYG00000017701) #20 HOXA6 (ENSPPYG00000017702) #21 HOXA5 (ENSPPYG00000017703) #22 HOXA4 (ENSPPYG00000017704) #23 ENSPPYG00000017705 HOXA3 (ENSPPYG00000017706) #24 HOXA2 (ENSPPYG00000017707) #25 HOXA1 (ENSPPYG00000029903) #26 SKAP2 (ENSPPYG00000017710) #28 ENSPPYG00000017711 SNX10 (ENSPPYG00000017713) #29 CBX3 (ENSPPYG00000017714) ##30 HNRNPA2B1 (ENSPPYG00000017715) ##31 NFE2L3 (ENSPPYG00000017716) #32 NPVF (ENSPPYG00000017717) #33 C7orf31 (ENSPPYG00000017718) #34 CYCS (ENSPPYG00000039115) ##35 OSBPL3 (ENSPPYG00000017720) #36 Tarsier MODERN SPECIES 5454 HIBADH (ENSTSYG00000037556) #14 ENSTSYG00000034876 #15 HOXA13 (ENSTSYG00000036597) #16 HOXA11 (ENSTSYG00000006241) #17 ENSTSYG00000037137 HOXA9 (ENSTSYG00000031784) #19 HOXA6 (ENSTSYG00000007233) #21 HOXA5 (ENSTSYG00000036293) #22 ENSTSYG00000035948 #23 HOXA3 (ENSTSYG00000036893) #24 HOXA2 (ENSTSYG00000008311) #25 HOXA1 (ENSTSYG00000036930) #26 Euarchontoglires_A ANCESTRAL SPECIES 23 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 Glires ANCESTRAL SPECIES 24 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.f ##35 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Lagomorpha ANCESTRAL SPECIES 39 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.e.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Rabbit MODERN SPECIES 1 PRR15 (ENSOCUG00000009403) ENSOCUG00000009401 #9 CPVL (ENSOCUG00000016573) #10 ENSOCUG00000026897 CREB5 (ENSOCUG00000003639) #11 ENSOCUG00000026115 JAZF1 (ENSOCUG00000012738) #12 TAX1BP1 (ENSOCUG00000012730) #13 HIBADH (ENSOCUG00000010349) #14 EVX1 (ENSOCUG00000015159) #15 HOXA13 (ENSOCUG00000024694) #16 HOXA11 (ENSOCUG00000015170) #17 HOXA10 (ENSOCUG00000029439) #18 HOXA9 (ENSOCUG00000020585) #19 HOXA7 (ENSOCUG00000015183) #20 HOXA5 (ENSOCUG00000029580) #22 ENSOCUG00000015190 #23 HOXA3 (ENSOCUG00000027405) #24 HOXA2 (ENSOCUG00000015205) #25 HOXA1 (ENSOCUG00000015215) #26 ENSOCUG00000022860 SKAP2 (ENSOCUG00000011330) #28 SNX10 (ENSOCUG00000004744) #29 ENSOCUG00000002464 ##30 ENSOCUG00000026859 ##31 NFE2L3 (ENSOCUG00000003140) #32 ENSOCUG00000030043 NPVF (ENSOCUG00000009530) #33 C7orf31 (ENSOCUG00000009523) #34 ENSOCUG00000025605 ##35 OSBPL3 (ENSOCUG00000007990) #36 Pika MODERN SPECIES 26 EVX1 (ENSOPRG00000010513) #15 HOXA13 (ENSOPRG00000010498) #16 HOXA10 (ENSOPRG00000010473) #18 HOXA9 (ENSOPRG00000010452) #19 HOXA7 (ENSOPRG00000010447) #20 HOXA6 (ENSOPRG00000010431) #21 HOXA5 (ENSOPRG00000010429) #22 ENSOPRG00000010425 ENSOPRG00000010411 HOXA3 (ENSOPRG00000010401) #24 ENSOPRG00000010388 HOXA1 (ENSOPRG00000010385) #26 Rodentia ANCESTRAL SPECIES 12 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Rodentia_A ANCESTRAL SPECIES 12 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Sciuridae ANCESTRAL SPECIES 7 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Marmotini ANCESTRAL SPECIES 37 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.m #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Marmotini_b ANCESTRAL SPECIES 26 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.m #14 ENSGT00940000155255.n #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Squirrel MODERN SPECIES 78 WIPF3 (ENSSTOG00000009012) #8 PRR15 (ENSSTOG00000020339) CHN2 (ENSSTOG00000002346) #9 CPVL (ENSSTOG00000010505) #10 CREB5 (ENSSTOG00000013279) #11 JAZF1 (ENSSTOG00000005946) #12 TAX1BP1 (ENSSTOG00000003056) #13 ENSSTOG00000004108 #14 EVX1 (ENSSTOG00000025642) #15 HOXA13 (ENSSTOG00000029157) #16 HOXA11 (ENSSTOG00000022674) #17 ENSSTOG00000021212 HOXA9 (ENSSTOG00000028613) #19 HOXA7 (ENSSTOG00000011208) #20 HOXA6 (ENSSTOG00000022675) #21 HOXA5 (ENSSTOG00000011206) #22 ENSSTOG00000024606 #23 HOXA3 (ENSSTOG00000021230) #24 HOXA2 (ENSSTOG00000016362) #25 HOXA1 (ENSSTOG00000024209) #26 SKAP2 (ENSSTOG00000021247) #28 SNX10 (ENSSTOG00000024131) #29 CBX3 (ENSSTOG00000006223) ##30 ENSSTOG00000006202 ##31 NFE2L3 (ENSSTOG00000014758) #32 NPVF (ENSSTOG00000008873) #33 C7orf31 (ENSSTOG00000008859) #34 OSBPL3 (ENSSTOG00000001755) #36 ENSSTOG00000014905 #37 PALS2 (ENSSTOG00000001908) NPY (ENSSTOG00000020410) Arctic ground squirrel MODERN SPECIES 223 EVX1 (ENSUPAG00010017335) #15 HOXA13 (ENSUPAG00010017357) #16 HOXA11 (ENSUPAG00010017374) #17 ENSUPAG00010017375 HOXA9 (ENSUPAG00010017383) #19 HOXA7 (ENSUPAG00010017387) #20 HOXA6 (ENSUPAG00010017390) #21 HOXA5 (ENSUPAG00010017397) #22 HOXA4 (ENSUPAG00010017400) #23 HOXA3 (ENSUPAG00010017403) #24 HOXA2 (ENSUPAG00010017405) #25 HOXA1 (ENSUPAG00010017428) #26 SKAP2 (ENSUPAG00010017432) #28 SNX10 (ENSUPAG00010017455) #29 ENSUPAG00010017469 ##30 ENSUPAG00010017471 ##31 ENSUPAG00010017632 #32 ENSUPAG00010017638 #32 ENSUPAG00010017645 NPVF (ENSUPAG00010017650) #33 C7orf31 (ENSUPAG00010017656) #34 ENSUPAG00010017667 ##35 OSBPL3 (ENSUPAG00010017676) #36 Alpin marmot MODERN SPECIES 26 PRR15 (ENSMMMG00000007372) CHN2 (ENSMMMG00000006900) #9 CPVL (ENSMMMG00000006841) #10 TRIL (ENSMMMG00000006835) CREB5 (ENSMMMG00000006736) #11 JAZF1 (ENSMMMG00000006695) #12 TAX1BP1 (ENSMMMG00000006653) #13 HIBADH (ENSMMMG00000006642) #14 EVX1 (ENSMMMG00000006623) #15 HOXA13 (ENSMMMG00000006593) #16 HOXA11 (ENSMMMG00000006566) #17 ENSMMMG00000006561 HOXA9 (ENSMMMG00000006550) #19 HOXA7 (ENSMMMG00000006545) #20 HOXA6 (ENSMMMG00000006535) #21 HOXA5 (ENSMMMG00000006523) #22 ENSMMMG00000006511 #23 HOXA3 (ENSMMMG00000006503) #24 HOXA2 (ENSMMMG00000006490) #25 HOXA1 (ENSMMMG00000006456) #26 ENSMMMG00000006435 ENSMMMG00000006429 #28 SNX10 (ENSMMMG00000006398) #29 ENSMMMG00000006360 ##30 ENSMMMG00000006197 ##31 ENSMMMG00000006190 #32 NPVF (ENSMMMG00000006151) #33 C7orf31 (ENSMMMG00000006134) #34 ENSMMMG00000006125 ##35 OSBPL3 (ENSMMMG00000005837) #36 GSDME (ENSMMMG00000005813) #37 Eurasian red squirrel MODERN SPECIES 17 CREB5 (ENSSVLG00005013014) #11 ENSSVLG00005012960 ENSSVLG00005012905 ENSSVLG00005012873 JAZF1 (ENSSVLG00005012816) #12 TAX1BP1 (ENSSVLG00005012659) #13 HIBADH (ENSSVLG00005012541) #14 EVX1 (ENSSVLG00005012472) #15 HOXA13 (ENSSVLG00005012374) #16 ENSSVLG00005012350 HOXA11 (ENSSVLG00005012306) #17 HOXA10 (ENSSVLG00005012252) #18 HOXA9 (ENSSVLG00005012091) #19 HOXA7 (ENSSVLG00005012041) #20 HOXA6 (ENSSVLG00005012001) #21 HOXA5 (ENSSVLG00005011967) #22 HOXA4 (ENSSVLG00005011927) #23 HOXA3 (ENSSVLG00005011881) #24 HOXA1 (ENSSVLG00005011664) #26 ENSSVLG00005011503 #28 SNX10 (ENSSVLG00005011242) #29 ENSSVLG00005011185 CBX3 (ENSSVLG00005011150) ##30 ENSSVLG00005011063 ##31 NFE2L3 (ENSSVLG00005021592) #32 ENSSVLG00005021555 ENSSVLG00005021514 ENSSVLG00005021470 ENSSVLG00005021453 ENSSVLG00005021443 NPVF (ENSSVLG00005021397) #33 Hystricomorpha ANCESTRAL SPECIES 14 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.f ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Hystricomorpha_a ANCESTRAL SPECIES 41 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.f ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Hystricomorpha_b ANCESTRAL SPECIES 39 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Degu MODERN SPECIES 56 CREB5 (ENSODEG00000008640) #11 JAZF1 (ENSODEG00000009398) #12 ENSODEG00000011321 #13 ENSODEG00000011639 ENSODEG00000019519 ENSODEG00000007935 HIBADH (ENSODEG00000010442) #14 EVX1 (ENSODEG00000007853) #15 HOXA13 (ENSODEG00000007693) #16 HOXA11 (ENSODEG00000010282) #17 ENSODEG00000009794 #18 ENSODEG00000009545 HOXA9 (ENSODEG00000009347) #19 HOXA7 (ENSODEG00000008762) #20 HOXA6 (ENSODEG00000007928) #21 HOXA5 (ENSODEG00000007850) #22 ENSODEG00000007568 HOXA3 (ENSODEG00000009161) #24 HOXA2 (ENSODEG00000009002) #25 HOXA1 (ENSODEG00000008589) #26 ENSODEG00000009507 SKAP2 (ENSODEG00000008150) #28 ENSODEG00000019395 SNX10 (ENSODEG00000007480) #29 ENSODEG00000008405 ##30 ENSODEG00000008757 ##31 NFE2L3 (ENSODEG00000007181) #32 ENSODEG00000007532 ENSODEG00000007198 NPVF (ENSODEG00000009144) #33 ENSODEG00000011380 Long-tailed chinchilla MODERN SPECIES 117 PRR15 (ENSCLAG00000010326) CHN2 (ENSCLAG00000014307) #9 CPVL (ENSCLAG00000009635) #10 TRIL (ENSCLAG00000018111) CREB5 (ENSCLAG00000011091) #11 JAZF1 (ENSCLAG00000009988) #12 TAX1BP1 (ENSCLAG00000013263) #13 HIBADH (ENSCLAG00000010236) #14 EVX1 (ENSCLAG00000010646) #15 HOXA13 (ENSCLAG00000010361) #16 HOXA11 (ENSCLAG00000009905) #17 HOXA10 (ENSCLAG00000015066) #18 HOXA9 (ENSCLAG00000010294) #19 HOXA7 (ENSCLAG00000008671) #20 HOXA6 (ENSCLAG00000006012) #21 HOXA5 (ENSCLAG00000004908) #22 ENSCLAG00000008251 #23 HOXA3 (ENSCLAG00000006878) #24 HOXA2 (ENSCLAG00000016180) #25 HOXA1 (ENSCLAG00000014364) #26 SKAP2 (ENSCLAG00000006785) #28 ENSCLAG00000005337 #29 ENSCLAG00000012267 ##30 ENSCLAG00000014058 ##31 NFE2L3 (ENSCLAG00000005908) #32 C7orf31 (ENSCLAG00000005045) #34 ENSCLAG00000004661 #35 OSBPL3 (ENSCLAG00000008517) #36 GSDME (ENSCLAG00000013195) #37 PALS2 (ENSCLAG00000006677) NPY (ENSCLAG00000004780) Guinea pig MODERN SPECIES 44 SCRN1 (ENSCPOG00000006943) #7 WIPF3 (ENSCPOG00000006935) #8 CHN2 (ENSCPOG00000013533) #9 CPVL (ENSCPOG00000013406) #10 TRIL (ENSCPOG00000024604) CREB5 (ENSCPOG00000013545) #11 JAZF1 (ENSCPOG00000034687) #12 TAX1BP1 (ENSCPOG00000000826) #13 HIBADH (ENSCPOG00000020159) #14 EVX1 (ENSCPOG00000011370) #15 HOXA13 (ENSCPOG00000033640) #16 HOXA11 (ENSCPOG00000039723) #17 ENSCPOG00000031122 HOXA9 (ENSCPOG00000011365) #19 HOXA6 (ENSCPOG00000032757) #21 HOXA5 (ENSCPOG00000035800) #22 ENSCPOG00000032985 #23 HOXA3 (ENSCPOG00000030159) #24 HOXA2 (ENSCPOG00000034959) #25 HOXA1 (ENSCPOG00000037658) #26 SKAP2 (ENSCPOG00000000258) #28 ENSCPOG00000037875 SNX10 (ENSCPOG00000006831) #29 CBX3 (ENSCPOG00000015168) ##30 HNRNPA2B1 (ENSCPOG00000036630) ##31 NFE2L3 (ENSCPOG00000037483) #32 NPVF (ENSCPOG00000013784) #33 C7orf31 (ENSCPOG00000013779) #34 ENSCPOG00000038520 ##35 OSBPL3 (ENSCPOG00000007017) #36 GSDME (ENSCPOG00000015567) #37 Naked mole-rat female MODERN SPECIES 5 CHN2 (ENSHGLG00000033880) #9 CPVL (ENSHGLG00000016195) #10 TRIL (ENSHGLG00000037451) CREB5 (ENSHGLG00000018417) #11 ENSHGLG00000016063 JAZF1 (ENSHGLG00000049016) #12 ENSHGLG00000016256 #13 ENSHGLG00000047390 HIBADH (ENSHGLG00000005354) #14 EVX1 (ENSHGLG00000005868) #15 HOXA13 (ENSHGLG00000039960) #16 HOXA11 (ENSHGLG00000009266) #17 HOXA10 (ENSHGLG00000050027) #18 HOXA9 (ENSHGLG00000045326) #19 ENSHGLG00000043027 #20 HOXA5 (ENSHGLG00000016863) #22 HOXA4 (ENSHGLG00000048807) #23 HOXA3 (ENSHGLG00000046038) #24 HOXA2 (ENSHGLG00000017804) #25 HOXA1 (ENSHGLG00000018117) #26 ENSHGLG00000036434 ENSHGLG00000045030 SKAP2 (ENSHGLG00000042970) #28 ENSHGLG00000050650 #29 ENSHGLG00000014772 ##30 ENSHGLG00000015396 ##31 NFE2L3 (ENSHGLG00000017200) #32 NPVF (ENSHGLG00000017985) #33 ENSHGLG00000041627 ENSHGLG00000016657 #34 ENSHGLG00000010213 ##35 Rodentia_B ANCESTRAL SPECIES 9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Myomorpha ANCESTRAL SPECIES 8 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Muroidea ANCESTRAL SPECIES 8 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Muroidea_A ANCESTRAL SPECIES 4 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Murinae ANCESTRAL SPECIES 4 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.a #30 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 Mus ANCESTRAL SPECIES 20 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000168920 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.a #30 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 Mus_A ANCESTRAL SPECIES 7 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000168920 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Mus_B ANCESTRAL SPECIES 20 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000168920 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Mouse MODERN SPECIES 15 Prr15 (ENSMUSG00000045725) Chn2 (ENSMUSG00000004633) #9 Cpvl (ENSMUSG00000052955) #10 Tril (ENSMUSG00000043496) Creb5 (ENSMUSG00000053007) #11 Jazf1 (ENSMUSG00000063568) #12 Tax1bp1 (ENSMUSG00000004535) #13 Hibadh (ENSMUSG00000029776) #14 Evx1 (ENSMUSG00000005503) #15 Hoxa13 (ENSMUSG00000038203) #16 Hoxa11 (ENSMUSG00000038210) #17 Hoxa10 (ENSMUSG00000000938) #18 Hoxa9 (ENSMUSG00000038227) #19 Hoxa7 (ENSMUSG00000038236) #20 Hoxa6 (ENSMUSG00000043219) #21 Hoxa5 (ENSMUSG00000038253) #22 Hoxa4 (ENSMUSG00000000942) #23 Hoxa3 (ENSMUSG00000079560) #24 Hoxa2 (ENSMUSG00000014704) #25 Hoxa1 (ENSMUSG00000029844) #26 Skap2 (ENSMUSG00000059182) #28 Snx10 (ENSMUSG00000038301) #29 Cbx3 (ENSMUSG00000029836) ##30 Hnrnpa2b1 (ENSMUSG00000004980) ##31 Nfe2l3 (ENSMUSG00000029832) #32 Npvf (ENSMUSG00000029831) #33 4921507P07Rik (ENSMUSG00000029828) #34 Cycs (ENSMUSG00000063694) ##35 Osbpl3 (ENSMUSG00000029822) #36 Gsdme (ENSMUSG00000029821) #37 Pals2 (ENSMUSG00000038388) Mus_C ANCESTRAL SPECIES 19 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000168920 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Steppe mouse MODERN SPECIES 3410 ENSMSIG00000009588 #11 Jazf1 (ENSMSIG00000009609) #12 Tax1bp1 (ENSMSIG00000009618) #13 Hibadh (ENSMSIG00000009672) #14 ENSMSIG00000009698 Evx1 (ENSMSIG00000009707) #15 ENSMSIG00000009733 #16 ENSMSIG00000009764 Hoxa11 (ENSMSIG00000009809) #17 ENSMSIG00000009817 Hoxa9 (ENSMSIG00000009832) #19 Hoxa7 (ENSMSIG00000009836) #20 Hoxa6 (ENSMSIG00000009850) #21 ENSMSIG00000009856 #22 Hoxa4 (ENSMSIG00000009874) #23 Hoxa3 (ENSMSIG00000009863) #24 ENSMSIG00000009893 ENSMSIG00000009910 Hoxa2 (ENSMSIG00000009914) #25 Hoxa1 (ENSMSIG00000009971) #26 Skap2 (ENSMSIG00000009994) #28 Snx10 (ENSMSIG00000010059) #29 Cbx3 (ENSMSIG00000010130) ##30 Hnrnpa2b1 (ENSMSIG00000010191) ##31 Nfe2l3 (ENSMSIG00000010307) #32 spretus MODERN SPECIES 15 Prr15 (MGP_SPRETEiJ_G0029403) Chn2 (MGP_SPRETEiJ_G0029402) #9 Cpvl (MGP_SPRETEiJ_G0029401) #10 Tril (MGP_SPRETEiJ_G0029400) Creb5 (MGP_SPRETEiJ_G0029399) #11 Jazf1 (MGP_SPRETEiJ_G0029398) #12 Tax1bp1 (MGP_SPRETEiJ_G0029397) #13 Hibadh (MGP_SPRETEiJ_G0029396) #14 Evx1 (MGP_SPRETEiJ_G0029395) #15 MGP_SPRETEiJ_G0029394 #16 Hoxa11 (MGP_SPRETEiJ_G0029393) #17 Hoxa10 (MGP_SPRETEiJ_G0029392) #18 Hoxa9 (MGP_SPRETEiJ_G0029391) #19 Hoxa7 (MGP_SPRETEiJ_G0029390) #20 Hoxa6 (MGP_SPRETEiJ_G0029389) #21 Hoxa5 (MGP_SPRETEiJ_G0029388) #22 Hoxa4 (MGP_SPRETEiJ_G0029387) #23 Hoxa3 (MGP_SPRETEiJ_G0029386) #24 MGP_SPRETEiJ_G0029385 Hoxa2 (MGP_SPRETEiJ_G0029384) #25 Hoxa1 (MGP_SPRETEiJ_G0029383) #26 Skap2 (MGP_SPRETEiJ_G0029382) #28 Snx10 (MGP_SPRETEiJ_G0029381) #29 MGP_SPRETEiJ_G0029380 #30 Hnrnpa2b1 (MGP_SPRETEiJ_G0029379) ##31 Nfe2l3 (MGP_SPRETEiJ_G0029378) #32 Npvf (MGP_SPRETEiJ_G0029377) #33 4921507P07Rik (MGP_SPRETEiJ_G0029376) #34 Osbpl3 (MGP_SPRETEiJ_G0029375) #36 Gsdme (MGP_SPRETEiJ_G0029374) #37 Pals2 (MGP_SPRETEiJ_G0029373) Ryukyu mouse MODERN SPECIES 15 Wipf3 (MGP_CAROLIEiJ_G0028402) #8 Prr15 (MGP_CAROLIEiJ_G0028401) Chn2 (MGP_CAROLIEiJ_G0028400) #9 Cpvl (MGP_CAROLIEiJ_G0028399) #10 Tril (MGP_CAROLIEiJ_G0028398) Creb5 (MGP_CAROLIEiJ_G0028397) #11 Jazf1 (MGP_CAROLIEiJ_G0028396) #12 Tax1bp1 (MGP_CAROLIEiJ_G0028395) #13 Hibadh (MGP_CAROLIEiJ_G0028394) #14 Evx1 (MGP_CAROLIEiJ_G0028393) #15 Hoxa13 (MGP_CAROLIEiJ_G0028392) #16 Hoxa11 (MGP_CAROLIEiJ_G0028391) #17 Hoxa10 (MGP_CAROLIEiJ_G0028390) #18 Hoxa9 (MGP_CAROLIEiJ_G0028389) #19 Hoxa7 (MGP_CAROLIEiJ_G0028388) #20 Hoxa5 (MGP_CAROLIEiJ_G0028387) #22 Hoxa4 (MGP_CAROLIEiJ_G0028386) #23 MGP_CAROLIEiJ_G0028385 Hoxa3 (MGP_CAROLIEiJ_G0028384) #24 MGP_CAROLIEiJ_G0028383 Hoxa2 (MGP_CAROLIEiJ_G0028382) #25 Hoxa1 (MGP_CAROLIEiJ_G0028381) #26 Skap2 (MGP_CAROLIEiJ_G0028380) #28 MGP_CAROLIEiJ_G0028379 #29 MGP_CAROLIEiJ_G0028378 #30 Hnrnpa2b1 (MGP_CAROLIEiJ_G0028377) ##31 Nfe2l3 (MGP_CAROLIEiJ_G0028376) #32 Npvf (MGP_CAROLIEiJ_G0028375) #33 4921507P07Rik (MGP_CAROLIEiJ_G0028374) #34 Cycs (MGP_CAROLIEiJ_G0028373) ##35 Osbpl3 (MGP_CAROLIEiJ_G0028372) #36 Shrew mouse MODERN SPECIES 11 Prr15 (MGP_PahariEiJ_G0022151) Chn2 (MGP_PahariEiJ_G0022150) #9 Cpvl (MGP_PahariEiJ_G0022149) #10 Tril (MGP_PahariEiJ_G0022148) Creb5 (MGP_PahariEiJ_G0022147) #11 Jazf1 (MGP_PahariEiJ_G0022146) #12 Tax1bp1 (MGP_PahariEiJ_G0022145) #13 Hibadh (MGP_PahariEiJ_G0022144) #14 Evx1 (MGP_PahariEiJ_G0022143) #15 Hoxa13 (MGP_PahariEiJ_G0022142) #16 Hoxa11 (MGP_PahariEiJ_G0022141) #17 Hoxa10 (MGP_PahariEiJ_G0022140) #18 Hoxa9 (MGP_PahariEiJ_G0022139) #19 Hoxa7 (MGP_PahariEiJ_G0022138) #20 Hoxa6 (MGP_PahariEiJ_G0022137) #21 Hoxa5 (MGP_PahariEiJ_G0022136) #22 Hoxa4 (MGP_PahariEiJ_G0022135) #23 Hoxa3 (MGP_PahariEiJ_G0022134) #24 MGP_PahariEiJ_G0022133 Hoxa2 (MGP_PahariEiJ_G0022132) #25 Hoxa1 (MGP_PahariEiJ_G0022131) #26 Skap2 (MGP_PahariEiJ_G0022130) #28 Snx10 (MGP_PahariEiJ_G0022129) #29 MGP_PahariEiJ_G0022128 #30 Hnrnpa2b1 (MGP_PahariEiJ_G0022127) ##31 Nfe2l3 (MGP_PahariEiJ_G0022126) #32 Npvf (MGP_PahariEiJ_G0022125) #33 4921507P07Rik (MGP_PahariEiJ_G0022124) #34 MGP_PahariEiJ_G0022123 #35 Osbpl3 (MGP_PahariEiJ_G0022122) #36 Gsdme (MGP_PahariEiJ_G0022121) #37 Rat MODERN SPECIES 14 ENSRNOG00000068681 Jazf1 (ENSRNOG00000027026) #12 Tax1bp1 (ENSRNOG00000008393) #13 AABR07060591.1 (ENSRNOG00000059195) ENSRNOG00000043170 ENSRNOG00000033407 Hibadh (ENSRNOG00000008063) #14 Evx1 (ENSRNOG00000046734) #15 Hoxa13 (ENSRNOG00000057061) #16 Hoxa11-as (ENSRNOG00000050564) Hoxa11 (ENSRNOG00000059870) #17 LOC100911668 (ENSRNOG00000065199) #18 Hoxa9 (ENSRNOG00000064322) #19 Hoxa7 (ENSRNOG00000046361) #20 LOC100911511 (ENSRNOG00000048917) #21 LOC103692127 (ENSRNOG00000047951) #22 Hoxa4 (ENSRNOG00000027365) #23 Hoxa3 (ENSRNOG00000006281) #24 Hoxa2 (ENSRNOG00000005968) #25 Hoxa1 (ENSRNOG00000005628) #26 Skap2 (ENSRNOG00000012228) #28 ENSRNOG00000064847 Snx10 (ENSRNOG00000011944) #29 AABR07060577.1 (ENSRNOG00000015328) Cbx3 (ENSRNOG00000011814) ##30 Hnrnpa2b1 (ENSRNOG00000011175) ##31 Nfe2l3 (ENSRNOG00000010886) #32 Cux1-ps1 (ENSRNOG00000065301) ENSRNOG00000062862 Npvf (ENSRNOG00000010806) #33 LOC500124 (ENSRNOG00000010594) #34 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.o #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Golden Hamster MODERN SPECIES 822 ENSMAUG00000000426 #13 ENSMAUG00000000446 #14 Evx1 (ENSMAUG00000000608) #15 Hoxa13 (ENSMAUG00000001019) #16 Hoxa11 (ENSMAUG00000001056) #17 Hoxa10 (ENSMAUG00000001122) #18 Hoxa9 (ENSMAUG00000000669) #19 Hoxa7 (ENSMAUG00000001017) #20 Hoxa3 (ENSMAUG00000001129) #24 Hoxa6 (ENSMAUG00000001166) #21 Hoxa5 (ENSMAUG00000002058) #22 ENSMAUG00000002622 #28 Snx10 (ENSMAUG00000003697) #29 ENSMAUG00000004290 #30 Hnrnpa2b1 (ENSMAUG00000005706) ##31 ENSMAUG00000004168 Npvf (ENSMAUG00000006780) #33 4921507P07Rik (ENSMAUG00000007334) #34 Chinese hamster chok1gshd MODERN SPECIES 212 Chn2 (ENSCGRG00001019164) #9 Cpvl (ENSCGRG00001012752) #10 Tril (ENSCGRG00001006970) Creb5 (ENSCGRG00001018702) #11 ENSCGRG00001012730 Jazf1 (ENSCGRG00001016388) #12 Tax1bp1 (ENSCGRG00001012350) #13 ENSCGRG00001006507 #14 Evx1 (ENSCGRG00001000887) #15 Hoxa13 (ENSCGRG00001017295) #16 Hoxa11 (ENSCGRG00001014980) #17 Hoxa10 (ENSCGRG00001012738) #18 Hoxa9 (ENSCGRG00001007287) #19 Hoxa7 (ENSCGRG00001019884) #20 Hoxa6 (ENSCGRG00001003922) #21 Hoxa5 (ENSCGRG00001001687) #22 Hoxa4 (ENSCGRG00001000481) #23 Hoxa3 (ENSCGRG00001023867) #24 Hoxa2 (ENSCGRG00001019226) #25 Hoxa1 (ENSCGRG00001018306) #26 ENSCGRG00001016005 Skap2 (ENSCGRG00001015578) #28 Snx10 (ENSCGRG00001006115) #29 Cbx3 (ENSCGRG00001024311) ##30 Hnrnpa2b1 (ENSCGRG00001022416) ##31 Nfe2l3 (ENSCGRG00001020882) #32 Npvf (ENSCGRG00001013575) #33 4921507P07Rik (ENSCGRG00001011704) #34 Cycs (ENSCGRG00001008806) ##35 Osbpl3 (ENSCGRG00001016467) #36 Gsdme (ENSCGRG00001000822) #37 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.a.a.a.b.a.b.a.a #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Northern American deer mouse MODERN SPECIES 16 Prr15 (ENSPEMG00000022428) Chn2 (ENSPEMG00000021269) #9 Cpvl (ENSPEMG00000018828) #10 Tril (ENSPEMG00000014631) Creb5 (ENSPEMG00000008456) #11 Jazf1 (ENSPEMG00000013422) #12 Tax1bp1 (ENSPEMG00000030323) #13 Hibadh (ENSPEMG00000004771) #14 Evx1 (ENSPEMG00000000503) #15 Hoxa13 (ENSPEMG00000024341) #16 Hoxa11 (ENSPEMG00000019890) #17 ENSPEMG00000025887 ENSPEMG00000020209 #19 ENSPEMG00000025086 Hoxa6 (ENSPEMG00000030268) #21 Hoxa5 (ENSPEMG00000029029) #22 ENSPEMG00000019740 #23 Hoxa3 (ENSPEMG00000028539) #24 Hoxa2 (ENSPEMG00000019520) #25 Hoxa1 (ENSPEMG00000020130) #26 ENSPEMG00000027861 Skap2 (ENSPEMG00000019639) #28 Snx10 (ENSPEMG00000005121) #29 Cbx3 (ENSPEMG00000020155) ##30 Hnrnpa2b1 (ENSPEMG00000014384) ##31 Nfe2l3 (ENSPEMG00000030696) #32 Npvf (ENSPEMG00000004324) #33 4921507P07Rik (ENSPEMG00000020256) #34 ENSPEMG00000028008 #35 Osbpl3 (ENSPEMG00000019801) #36 Gsdme (ENSPEMG00000008779) #37 Prairie vole MODERN SPECIES 94 Cwc27 (ENSMOCG00000001833) Srek1ip1 (ENSMOCG00000018975) Shisal2b (ENSMOCG00000017631) ENSMOCG00000000487 Rgs7bp (ENSMOCG00000008886) Rnf180 (ENSMOCG00000005501) Htr1a (ENSMOCG00000003283) Evx1 (ENSMOCG00000001101) #15 Hoxa13 (ENSMOCG00000000460) #16 Hoxa11 (ENSMOCG00000004073) #17 Hoxa10 (ENSMOCG00000011516) #18 Hoxa9 (ENSMOCG00000017667) #19 Hoxa7 (ENSMOCG00000001247) #20 Hoxa3 (ENSMOCG00000004227) #24 Hoxa6 (ENSMOCG00000010245) #21 Hoxa5 (ENSMOCG00000012515) #22 Hoxa4 (ENSMOCG00000011933) #23 ENSMOCG00000016584 Hoxa2 (ENSMOCG00000019225) #25 Hoxa1 (ENSMOCG00000005031) #26 Skap2 (ENSMOCG00000017060) #28 Snx10 (ENSMOCG00000016046) #29 Cbx3 (ENSMOCG00000008087) ##30 Hnrnpa2b1 (ENSMOCG00000009258) ##31 Nfe2l3 (ENSMOCG00000011787) #32 Npvf (ENSMOCG00000009097) #33 4921507P07Rik (ENSMOCG00000011632) #34 ENSMOCG00000012702 ##35 ENSMOCG00000018163 #36 Gsdme (ENSMOCG00000018193) #37 Pals2 (ENSMOCG00000015580) Upper Galilee mountains blind mole rat MODERN SPECIES 1152 Chn2 (ENSNGAG00000023838) #9 Cpvl (ENSNGAG00000024201) #10 Tril (ENSNGAG00000012621) Creb5 (ENSNGAG00000024347) #11 Jazf1 (ENSNGAG00000015532) #12 Tax1bp1 (ENSNGAG00000023119) #13 Hibadh (ENSNGAG00000011196) #14 Evx1 (ENSNGAG00000001633) #15 Hoxa13 (ENSNGAG00000024186) #16 Hoxa11 (ENSNGAG00000023780) #17 ENSNGAG00000013764 #18 ENSNGAG00000017228 Hoxa9 (ENSNGAG00000016754) #19 Hoxa7 (ENSNGAG00000021697) #20 Hoxa6 (ENSNGAG00000012897) #21 Hoxa5 (ENSNGAG00000023140) #22 Hoxa4 (ENSNGAG00000022510) #23 Hoxa3 (ENSNGAG00000016765) #24 Hoxa2 (ENSNGAG00000014874) #25 Hoxa1 (ENSNGAG00000021363) #26 Skap2 (ENSNGAG00000016991) #28 ENSNGAG00000010519 Snx10 (ENSNGAG00000006392) #29 ENSNGAG00000024194 ##30 Hnrnpa2b1 (ENSNGAG00000015156) ##31 Nfe2l3 (ENSNGAG00000023028) #32 Npvf (ENSNGAG00000023484) #33 4921507P07Rik (ENSNGAG00000022528) #34 ENSNGAG00000013657 ##35 ENSNGAG00000003815 ENSNGAG00000024141 #36 Lesser Egyptian jerboa MODERN SPECIES 49 Cpvl (ENSJJAG00000008362) #10 Tril (ENSJJAG00000019712) Creb5 (ENSJJAG00000015436) #11 Jazf1 (ENSJJAG00000023495) #12 ENSJJAG00000023777 #13 Hibadh (ENSJJAG00000008176) #14 Evx1 (ENSJJAG00000022445) #15 ENSJJAG00000016730 #16 Hoxa11 (ENSJJAG00000018070) #17 ENSJJAG00000013637 ENSJJAG00000020521 #18 Hoxa9 (ENSJJAG00000003182) #19 Hoxa7 (ENSJJAG00000001940) #20 Hoxa3 (ENSJJAG00000014001) #24 Hoxa6 (ENSJJAG00000017936) #21 Hoxa5 (ENSJJAG00000011757) #22 ENSJJAG00000021517 #23 Hoxa2 (ENSJJAG00000021712) #25 Hoxa1 (ENSJJAG00000023032) #26 Skap2 (ENSJJAG00000009704) #28 Snx10 (ENSJJAG00000010400) #29 ENSJJAG00000014919 ENSJJAG00000018731 ##30 Nfe2l3 (ENSJJAG00000013672) #32 Npvf (ENSJJAG00000023289) #33 4921507P07Rik (ENSJJAG00000011772) #34 ENSJJAG00000004363 ##35 ENSJJAG00000016917 Osbpl3 (ENSJJAG00000017704) #36 ENSJJAG00000023312 #37 Pals2 (ENSJJAG00000001765) Kangaroo rat MODERN SPECIES 395 Chn2 (ENSDORG00000003980) #9 Cpvl (ENSDORG00000012786) #10 Tril (ENSDORG00000025363) Creb5 (ENSDORG00000010434) #11 Jazf1 (ENSDORG00000029172) #12 ENSDORG00000030184 #13 Hibadh (ENSDORG00000002792) #14 Evx1 (ENSDORG00000024747) #15 Hoxa13 (ENSDORG00000006328) #16 Hoxa11 (ENSDORG00000006326) #17 ENSDORG00000028643 ENSDORG00000029112 #18 Hoxa9 (ENSDORG00000006323) #19 Hoxa7 (ENSDORG00000006321) #20 Hoxa6 (ENSDORG00000006319) #21 Hoxa5 (ENSDORG00000025053) #22 Hoxa3 (ENSDORG00000027678) #24 Hoxa4 (ENSDORG00000006316) #23 Hoxa2 (ENSDORG00000006312) #25 Hoxa1 (ENSDORG00000006311) #26 Skap2 (ENSDORG00000009682) #28 Snx10 (ENSDORG00000028812) #29 ENSDORG00000005487 ##30 Hnrnpa2b1 (ENSDORG00000005482) ##31 Nfe2l3 (ENSDORG00000027950) #32 Npvf (ENSDORG00000027438) #33 4921507P07Rik (ENSDORG00000004102) #34 Cycs (ENSDORG00000029787) ##35 Osbpl3 (ENSDORG00000011217) #36 ENSDORG00000027677 #36 Gsdme (ENSDORG00000004130) #37 Laurasiatheria ANCESTRAL SPECIES 22 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00390000009854 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.p ##35 ENSGT00390000009405.b.o.b ##35 ENSGT00940000155957 #36 Camelidae ANCESTRAL SPECIES 2 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00930000152153 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.f.c.b #31 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.o.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Arabian camel MODERN SPECIES 33 CHN2 (ENSCDRG00005001695) #9 CPVL (ENSCDRG00005001591) #10 TRIL (ENSCDRG00005001580) CREB5 (ENSCDRG00005001440) #11 JAZF1 (ENSCDRG00005001369) #12 TAX1BP1 (ENSCDRG00005001239) #13 HIBADH (ENSCDRG00005001193) #14 ENSCDRG00005001177 #15 ENSCDRG00005001165 HOXA13 (ENSCDRG00005001129) #16 HOXA11 (ENSCDRG00005001112) #17 HOXA10 (ENSCDRG00005001092) #18 HOXA9 (ENSCDRG00005001067) #19 HOXA7 (ENSCDRG00005001043) #20 HOXA6 (ENSCDRG00005001033) #21 HOXA5 (ENSCDRG00005001022) #22 HOXA3 (ENSCDRG00005000976) #24 ENSCDRG00005000963 HOXA1 (ENSCDRG00005000950) #26 SKAP2 (ENSCDRG00005000915) #28 SNX10 (ENSCDRG00005000870) #29 CBX3 (ENSCDRG00005000839) ##30 HNRNPA2B1 (ENSCDRG00005000755) #31 NFE2L3 (ENSCDRG00005000723) #32 ENSCDRG00005000704 NPVF (ENSCDRG00005000692) #33 C7orf31 (ENSCDRG00005000664) #34 CYCS (ENSCDRG00005000650) ##35 OSBPL3 (ENSCDRG00005000550) #36 GSDME (ENSCDRG00005000498) #37 PALS2 (ENSCDRG00005000457) Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.p ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Cetacea ANCESTRAL SPECIES 13 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.h #13 ENSGT01000000219565 ENSGT00940000155255.q.a #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.a #30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT01030000235330.c.a ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.o.b ##35 ENSGT00940000155957 #36 Odontoceti ANCESTRAL SPECIES 12 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.h #13 ENSGT01000000219565 ENSGT00940000155255.q.a #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.f.d #31 ENSGT00940000153305.c.e.a #30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT01030000235330.c.a ENSGT00390000003271 #33 ENSGT00390000009405.b.o.b ##35 Odontoceti_a ANCESTRAL SPECIES 13 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.h #13 ENSGT01000000219565 ENSGT00940000155255.q.a #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000009405.b.o.b.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.h #13 ENSGT01000000219565 ENSGT00940000155255.q.a #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000001447.pb.a ENSGT00390000003271 #33 ENSGT00390000009405.b.o.b.a ##35 ENSGT00940000155957 #36 ENSGT00940000155196.n.a ENSGT00940000155880 #37 Monodontidae ANCESTRAL SPECIES 12 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.h #13 ENSGT01000000219565 ENSGT00940000155255.q.a #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000001447.pb.a ENSGT00390000003271 #33 ENSGT00390000009405.b.o.b.a ##35 ENSGT00940000155957 #36 ENSGT00940000155196.n.a ENSGT00940000155880 #37 Beluga whale MODERN SPECIES 72 CHN2 (ENSDLEG00000008545) #9 CPVL (ENSDLEG00000008886) #10 TRIL (ENSDLEG00000008983) CREB5 (ENSDLEG00000009000) #11 JAZF1 (ENSDLEG00000009079) #12 TAX1BP1 (ENSDLEG00000009131) #13 ENSDLEG00000009179 HIBADH (ENSDLEG00000009200) #14 EVX1 (ENSDLEG00000009229) #15 HOXA13 (ENSDLEG00000009264) #16 HOXA11 (ENSDLEG00000009292) #17 HOXA10 (ENSDLEG00000009312) #18 HOXA9 (ENSDLEG00000009337) #19 HOXA7 (ENSDLEG00000009351) #20 HOXA6 (ENSDLEG00000009363) #21 HOXA5 (ENSDLEG00000009373) #22 HOXA4 (ENSDLEG00000009384) #23 HOXA3 (ENSDLEG00000009412) #24 HOXA2 (ENSDLEG00000009422) #25 HOXA1 (ENSDLEG00000009441) #26 SKAP2 (ENSDLEG00000009464) #28 SNX10 (ENSDLEG00000009511) #29 CBX3 (ENSDLEG00000009530) ##30 HNRNPA2B1 (ENSDLEG00000009544) ##31 NFE2L3 (ENSDLEG00000009586) #32 ENSDLEG00000009623 NPVF (ENSDLEG00000009634) #33 ENSDLEG00000009662 ##35 OSBPL3 (ENSDLEG00000009692) #36 ENSDLEG00000009794 GSDME (ENSDLEG00000009804) #37 Narwhal MODERN SPECIES 306 PRR15 (ENSMMNG00015006804) CHN2 (ENSMMNG00015006621) #9 CPVL (ENSMMNG00015006550) #10 TRIL (ENSMMNG00015006537) CREB5 (ENSMMNG00015006474) #11 JAZF1 (ENSMMNG00015006424) #12 TAX1BP1 (ENSMMNG00015006389) #13 ENSMMNG00015006356 #14 EVX1 (ENSMMNG00015006342) #15 HOXA13 (ENSMMNG00015006328) #16 HOXA11 (ENSMMNG00015006318) #17 ENSMMNG00015006310 HOXA9 (ENSMMNG00015006287) #19 HOXA7 (ENSMMNG00015006271) #20 HOXA6 (ENSMMNG00015006261) #21 HOXA5 (ENSMMNG00015006249) #22 HOXA4 (ENSMMNG00015006236) #23 HOXA3 (ENSMMNG00015006227) #24 HOXA2 (ENSMMNG00015006212) #25 HOXA1 (ENSMMNG00015006195) #26 SKAP2 (ENSMMNG00015006170) #28 SNX10 (ENSMMNG00015006146) #29 CBX3 (ENSMMNG00015006116) ##30 ENSMMNG00015006029 ##31 NFE2L3 (ENSMMNG00015005990) #32 ENSMMNG00015005975 ENSMMNG00015005956 NPVF (ENSMMNG00015005934) #33 ENSMMNG00015005923 ##35 ENSMMNG00015005917 OSBPL3 (ENSMMNG00015005858) #36 Vaquita MODERN SPECIES 20 CHN2 (ENSPSNG00000012608) #9 CPVL (ENSPSNG00000012990) #10 TRIL (ENSPSNG00000013162) CREB5 (ENSPSNG00000013240) #11 JAZF1 (ENSPSNG00000013601) #12 TAX1BP1 (ENSPSNG00000013728) #13 ENSPSNG00000013961 ENSPSNG00000014017 #14 EVX1 (ENSPSNG00000014065) #15 HOXA13 (ENSPSNG00000014146) #16 HOXA11 (ENSPSNG00000014203) #17 HOXA10 (ENSPSNG00000014245) #18 HOXA9 (ENSPSNG00000014307) #19 HOXA7 (ENSPSNG00000014456) #20 HOXA6 (ENSPSNG00000014504) #21 HOXA5 (ENSPSNG00000014558) #22 HOXA4 (ENSPSNG00000014619) #23 HOXA3 (ENSPSNG00000014676) #24 HOXA2 (ENSPSNG00000014724) #25 HOXA1 (ENSPSNG00000014773) #26 SKAP2 (ENSPSNG00000014836) #28 SNX10 (ENSPSNG00000014940) #29 ENSPSNG00000015118 #30 ENSPSNG00000015202 ##31 NFE2L3 (ENSPSNG00000015368) #32 ENSPSNG00000015465 NPVF (ENSPSNG00000015564) #33 ENSPSNG00000015619 ##35 OSBPL3 (ENSPSNG00000015710) #36 ENSPSNG00000015897 GSDME (ENSPSNG00000015923) #37 Dolphin MODERN SPECIES 445 HOXA7 (ENSTTRG00000006782) #20 HOXA6 (ENSTTRG00000006778) #21 HOXA5 (ENSTTRG00000006777) #22 HOXA4 (ENSTTRG00000006775) #23 ENSTTRG00000006773 HOXA3 (ENSTTRG00000006769) #24 HOXA2 (ENSTTRG00000006765) #25 HOXA1 (ENSTTRG00000006761) #26 SKAP2 (ENSTTRG00000006754) #28 Sperm whale MODERN SPECIES 16 TRIL (ENSPCTG00005006053) CREB5 (ENSPCTG00005006108) #11 JAZF1 (ENSPCTG00005006349) #12 ENSPCTG00005006433 #13 ENSPCTG00005006916 ENSPCTG00005006930 HIBADH (ENSPCTG00005006944) #14 EVX1 (ENSPCTG00005006960) #15 HOXA13 (ENSPCTG00005006985) #16 HOXA11 (ENSPCTG00005000283) #17 ENSPCTG00005000317 ENSPCTG00005000324 #18 HOXA9 (ENSPCTG00005000359) #19 HOXA7 (ENSPCTG00005000380) #20 HOXA6 (ENSPCTG00005000391) #21 HOXA5 (ENSPCTG00005000400) #22 HOXA4 (ENSPCTG00005000409) #23 HOXA2 (ENSPCTG00005000420) #25 HOXA1 (ENSPCTG00005000429) #26 SKAP2 (ENSPCTG00005000453) #28 SNX10 (ENSPCTG00005000481) #29 ENSPCTG00005000501 #30 HNRNPA2B1 (ENSPCTG00005000537) ##31 NFE2L3 (ENSPCTG00005000589) #32 ENSPCTG00005000600 NPVF (ENSPCTG00005000613) #33 ENSPCTG00005000629 ##35 ENSPCTG00005000640 OSBPL3 (ENSPCTG00005000674) #36 GSDME (ENSPCTG00005000772) #37 MPP6 (ENSPCTG00005000805) Blue whale MODERN SPECIES 20 CHN2 (ENSBMSG00010012867) #9 CPVL (ENSBMSG00010013056) #10 TRIL (ENSBMSG00010013079) CREB5 (ENSBMSG00010013101) #11 JAZF1 (ENSBMSG00010013161) #12 ENSBMSG00010013194 #13 ENSBMSG00010013269 ENSBMSG00010013284 #14 EVX1 (ENSBMSG00010013302) #15 HOXA13 (ENSBMSG00010013314) #16 HOXA11 (ENSBMSG00010013325) #17 HOXA10 (ENSBMSG00010013344) #18 HOXA9 (ENSBMSG00010013373) #19 HOXA7 (ENSBMSG00010013396) #20 HOXA6 (ENSBMSG00010013414) #21 HOXA5 (ENSBMSG00010013430) #22 HOXA4 (ENSBMSG00010013444) #23 HOXA3 (ENSBMSG00010013449) #24 HOXA2 (ENSBMSG00010013466) #25 ENSBMSG00010013476 #26 SKAP2 (ENSBMSG00010013495) #28 SNX10 (ENSBMSG00010013517) #29 ENSBMSG00010013565 #30 ENSBMSG00010013581 ##31 NFE2L3 (ENSBMSG00010013602) #32 ENSBMSG00010013621 NPVF (ENSBMSG00010013643) #33 C7orf31 (ENSBMSG00010013660) #34 ENSBMSG00010013701 ##35 ENSBMSG00010013713 OSBPL3 (ENSBMSG00010013742) #36 Pecora ANCESTRAL SPECIES 11 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.p.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Yarkand deer MODERN SPECIES 9 CHN2 (ENSCHYG00000006232) #9 CPVL (ENSCHYG00000006755) #10 TRIL (ENSCHYG00000006856) CREB5 (ENSCHYG00000006881) #11 JAZF1 (ENSCHYG00000007125) #12 TAX1BP1 (ENSCHYG00000007239) #13 ENSCHYG00000007648 ENSCHYG00000007675 #14 EVX1 (ENSCHYG00000007735) #15 HOXA13 (ENSCHYG00000007767) #16 HOXA11 (ENSCHYG00000007789) #17 ENSCHYG00000007809 HOXA9 (ENSCHYG00000007842) #19 HOXA7 (ENSCHYG00000007865) #20 HOXA6 (ENSCHYG00000007892) #21 HOXA5 (ENSCHYG00000007908) #22 HOXA4 (ENSCHYG00000007930) #23 HOXA3 (ENSCHYG00000007949) #24 HOXA2 (ENSCHYG00000007974) #25 HOXA1 (ENSCHYG00000007989) #26 SKAP2 (ENSCHYG00000008025) #28 SNX10 (ENSCHYG00000008200) #29 ENSCHYG00000008298 #30 ENSCHYG00000008354 ##31 NFE2L3 (ENSCHYG00000008565) #32 NPVF (ENSCHYG00000008663) #33 C7orf31 (ENSCHYG00000008694) #34 ENSCHYG00000008826 ##35 OSBPL3 (ENSCHYG00000008908) #36 GSDME (ENSCHYG00000009207) #37 PALS2 (ENSCHYG00000009307) Percora_a ANCESTRAL SPECIES 11 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.p.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Bovidae ANCESTRAL SPECIES 12 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.p.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Bovinae ANCESTRAL SPECIES 8 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00930000152153 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00960000190781 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.p.a ##35 ENSGT00940000155957 #36 ENSGT00940000154796.C.b.b Bos ANCESTRAL SPECIES 8 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00960000190781 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.p.a ##35 ENSGT00940000155957 #36 ENSGT00940000154796.C.b.b Bos_b ANCESTRAL SPECIES 7 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00960000190781 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b.e.a.a ENSGT00940000155957 #36 ENSGT00940000154796.C.b.b Cow MODERN SPECIES 23 ENSBTAG00000054573 CPVL (ENSBTAG00000007146) #10 TRIL (ENSBTAG00000024340) CREB5 (ENSBTAG00000018909) #11 JAZF1 (ENSBTAG00000019024) #12 TAX1BP1 (ENSBTAG00000019020) #13 HIBADH (ENSBTAG00000001036) #14 EVX1 (ENSBTAG00000020919) #15 HOXA13 (ENSBTAG00000014735) #16 HOXA11 (ENSBTAG00000014738) #17 HOXA10 (ENSBTAG00000040082) ENSBTAG00000048562 #18 HOXA9 (ENSBTAG00000053595) #19 HOXA7 (ENSBTAG00000001455) #20 HOXA6 (ENSBTAG00000024341) #21 HOXA5 (ENSBTAG00000012211) #22 HOXA3 (ENSBTAG00000008139) #24 HOXA4 (ENSBTAG00000001063) #23 HOXA2 (ENSBTAG00000008138) #25 HOXA1 (ENSBTAG00000013263) #26 ENSBTAG00000047863 SKAP2 (ENSBTAG00000005650) #28 SNX10 (ENSBTAG00000001822) #29 CBX3 (ENSBTAG00000049437) ##30 HNRNPA2B1 (ENSBTAG00000005726) #31 NFE2L3 (ENSBTAG00000004136) #32 NPVF (ENSBTAG00000019447) #33 C4H7orf31 (ENSBTAG00000019445) #34 CYCS (ENSBTAG00000022613) OSBPL3 (ENSBTAG00000019342) #36 ENSBTAG00000046586 Hybrid Bos Indicus MODERN SPECIES 23 CHN2 (ENSBIXG00005014470) #9 CPVL (ENSBIXG00005002017) #10 ENSBIXG00005014543 TRIL (ENSBIXG00005014551) CREB5 (ENSBIXG00005014739) #11 JAZF1 (ENSBIXG00005002099) #12 TAX1BP1 (ENSBIXG00005015021) #13 ENSBIXG00005015117 #14 EVX1 (ENSBIXG00005015162) #15 HOXA13 (ENSBIXG00005015197) #16 HOXA11 (ENSBIXG00005015251) #17 HOXA10 (ENSBIXG00005015278) #18 HOXA9 (ENSBIXG00005015312) #19 HOXA7 (ENSBIXG00005015346) #20 HOXA6 (ENSBIXG00005002254) #21 HOXA5 (ENSBIXG00005015377) #22 HOXA4 (ENSBIXG00005015410) #23 HOXA3 (ENSBIXG00005015435) #24 HOXA2 (ENSBIXG00005015454) #25 HOXA1 (ENSBIXG00005015513) #26 ENSBIXG00005007546 SKAP2 (ENSBIXG00005002343) #28 ENSBIXG00005015618 SNX10 (ENSBIXG00005015700) #29 CBX3 (ENSBIXG00005015743) ##30 ENSBIXG00005015830 ##31 NFE2L3 (ENSBIXG00005015851) #32 NPVF (ENSBIXG00005015893) #33 C7orf31 (ENSBIXG00005015905) #34 ENSBIXG00005015956 OSBPL3 (ENSBIXG00005016040) #36 Bos_a ANCESTRAL SPECIES 12 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00960000190781 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.p.a ##35 ENSGT00940000155957 #36 ENSGT00940000154796.C.b.b Domestic yak MODERN SPECIES 23 ENSBGRG00000002866 CHN2 (ENSBGRG00000002806) #9 CPVL (ENSBGRG00000002765) #10 ENSBGRG00000002725 CREB5 (ENSBGRG00000002665) #11 JAZF1 (ENSBGRG00000002602) #12 TAX1BP1 (ENSBGRG00000002260) #13 HIBADH (ENSBGRG00000002143) #14 EVX1 (ENSBGRG00000002117) #15 HOXA13 (ENSBGRG00000002092) #16 HOXA11 (ENSBGRG00000002077) #17 hoxA10 (ENSBGRG00000002072) HOXA9 (ENSBGRG00000002058) #19 HOXA7 (ENSBGRG00000002048) #20 HOXA6 (ENSBGRG00000002039) #21 HOXA5 (ENSBGRG00000002031) #22 HOXA4 (ENSBGRG00000002016) #23 HOXA3 (ENSBGRG00000001999) #24 HOXA2 (ENSBGRG00000001989) #25 HOXA1 (ENSBGRG00000001963) #26 ENSBGRG00000001956 SKAP2 (ENSBGRG00000001745) #28 SNX10 (ENSBGRG00000001644) #29 ENSBGRG00000001597 ##30 ENSBGRG00000001515 ##31 NFE2L3 (ENSBGRG00000001498) #32 NPVF (ENSBGRG00000001474) #33 C7orf31 (ENSBGRG00000001447) #34 ENSBGRG00000001429 OSBPL3 (ENSBGRG00000001354) #36 ENSBGRG00000001326 Wild yak MODERN SPECIES 1550 HIBADH (ENSBMUG00000002352) #14 EVX1 (ENSBMUG00000002374) #15 ENSBMUG00000002431 #16 ENSBMUG00000002455 ENSBMUG00000002522 #17 ENSBMUG00000002543 HOXA9 (ENSBMUG00000002568) #19 HOXA7 (ENSBMUG00000002587) #20 HOXA6 (ENSBMUG00000002606) #21 HOXA5 (ENSBMUG00000002631) #22 ENSBMUG00000002645 #23 HOXA3 (ENSBMUG00000002664) #24 HOXA2 (ENSBMUG00000002681) #25 HOXA1 (ENSBMUG00000002735) #26 ENSBMUG00000002753 SKAP2 (ENSBMUG00000002819) #28 SNX10 (ENSBMUG00000002905) #29 CBX3 (ENSBMUG00000002936) ##30 ENSBMUG00000003049 ##31 NFE2L3 (ENSBMUG00000003080) #32 American bison MODERN SPECIES 3278 CPVL (ENSBBBG00000005509) #10 TRIL (ENSBBBG00000020390) CREB5 (ENSBBBG00000000655) #11 JAZF1 (ENSBBBG00000000585) #12 TAX1BP1 (ENSBBBG00000005530) #13 ENSBBBG00000020460 #14 ENSBBBG00000020467 ENSBBBG00000020482 #16 HOXA11 (ENSBBBG00000020500) #17 ENSBBBG00000020506 ENSBBBG00000005537 #19 HOXA7 (ENSBBBG00000020511) #20 HOXA6 (ENSBBBG00000020515) #21 HOXA5 (ENSBBBG00000020518) #22 ENSBBBG00000020521 #23 HOXA3 (ENSBBBG00000005541) #24 HOXA2 (ENSBBBG00000020536) #25 HOXA1 (ENSBBBG00000020558) #26 ENSBBBG00000005551 SKAP2 (ENSBBBG00000020584) #28 SNX10 (ENSBBBG00000006863) #29 ENSBBBG00000020651 #30 ENSBBBG00000007053 ##31 NFE2L3 (ENSBBBG00000020743) #32 NPVF (ENSBBBG00000020751) #33 C7orf31 (ENSBBBG00000005601) #34 ENSBBBG00000020786 ##35 OSBPL3 (ENSBBBG00000021014) #36 ENSBBBG00000021036 Caprinae ANCESTRAL SPECIES 10 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q.e #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00700000106050 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b.e.a.b.a ENSGT00940000157883.a.b.e.b.e.a.a ENSGT00940000155957 #36 ENSGT00940000155880 #37 Rambouillet Sheep MODERN SPECIES 20 CPVL (ENSOARG00020013107) #10 TRIL (ENSOARG00020013245) CREB5 (ENSOARG00020013276) #11 JAZF1 (ENSOARG00020013785) #12 TAX1BP1 (ENSOARG00020013883) #13 ENSOARG00020014245 ENSOARG00020014324 #14 EVX1 (ENSOARG00020014391) #15 HOXA13 (ENSOARG00020000130) #16 ENSOARG00020000154 HOXA11 (ENSOARG00020000170) #17 ENSOARG00020000180 HOXA9 (ENSOARG00020000214) #19 HOXA7 (ENSOARG00020000223) #20 HOXA6 (ENSOARG00020000238) #21 HOXA5 (ENSOARG00020000251) #22 HOXA4 (ENSOARG00020000267) #23 HOXA3 (ENSOARG00020000280) #24 HOXA2 (ENSOARG00020000291) #25 HOXA1 (ENSOARG00020000312) #26 SKAP2 (ENSOARG00020000333) #28 SNX10 (ENSOARG00020000354) #29 ENSOARG00020000374 ##30 HNRNPA2B1 (ENSOARG00020000397) ##31 NFE2L3 (ENSOARG00020000455) #32 ENSOARG00020000488 NPVF (ENSOARG00020000502) #33 CYCS (ENSOARG00020000536) OSBPL3 (ENSOARG00020000582) #36 GSDME (ENSOARG00020000709) #37 PALS2 (ENSOARG00020000732) Goat MODERN SPECIES 23 TRIL (ENSCHIG00000009595) CREB5 (ENSCHIG00000017696) #11 JAZF1 (ENSCHIG00000000484) #12 ENSCHIG00000017265 TAX1BP1 (ENSCHIG00000008769) #13 ENSCHIG00000020306 ENSCHIG00000011333 #14 ENSCHIG00000020370 EVX1 (ENSCHIG00000015016) #15 HOXA13 (ENSCHIG00000008199) #16 HOXA11 (ENSCHIG00000020568) #17 HOXA10 (ENSCHIG00000014836) #18 HOXA9 (ENSCHIG00000004716) #19 HOXA7 (ENSCHIG00000021947) #20 HOXA6 (ENSCHIG00000015611) #21 HOXA5 (ENSCHIG00000005534) #22 HOXA4 (ENSCHIG00000019699) #23 HOXA3 (ENSCHIG00000014179) #24 HOXA2 (ENSCHIG00000024428) #25 HOXA1 (ENSCHIG00000023757) #26 SKAP2 (ENSCHIG00000011784) #28 SNX10 (ENSCHIG00000021478) #29 CBX3 (ENSCHIG00000010019) ##30 ENSCHIG00000022444 ##31 NFE2L3 (ENSCHIG00000009777) #32 NPVF (ENSCHIG00000021793) #33 C7orf31 (ENSCHIG00000012874) #34 ENSCHIG00000025853 OSBPL3 (ENSCHIG00000017106) #36 GSDME (ENSCHIG00000026791) #37 PALS2 (ENSCHIG00000018994) Siberian musk deer MODERN SPECIES 87 CHN2 (ENSMMSG00000009425) #9 CPVL (ENSMMSG00000009268) #10 TRIL (ENSMMSG00000009241) CREB5 (ENSMMSG00000009091) #11 ENSMMSG00000009066 JAZF1 (ENSMMSG00000009021) #12 TAX1BP1 (ENSMMSG00000008891) #13 HIBADH (ENSMMSG00000008828) #14 EVX1 (ENSMMSG00000008787) #15 HOXA13 (ENSMMSG00000008765) #16 HOXA11 (ENSMMSG00000008748) #17 HOXA10 (ENSMMSG00000008727) #18 HOXA9 (ENSMMSG00000008679) #19 HOXA7 (ENSMMSG00000008650) #20 HOXA6 (ENSMMSG00000008621) #21 HOXA5 (ENSMMSG00000008606) #22 HOXA4 (ENSMMSG00000008591) #23 HOXA3 (ENSMMSG00000008574) #24 HOXA2 (ENSMMSG00000008551) #25 HOXA1 (ENSMMSG00000008512) #26 SKAP2 (ENSMMSG00000008475) #28 SNX10 (ENSMMSG00000008398) #29 CBX3 (ENSMMSG00000008333) ##30 ENSMMSG00000008126 ##31 NFE2L3 (ENSMMSG00000008071) #32 ENSMMSG00000008040 #31 NPVF (ENSMMSG00000008017) #33 C7orf31 (ENSMMSG00000007922) #34 ENSMMSG00000007897 ##35 ENSMMSG00000007886 OSBPL3 (ENSMMSG00000007737) #36 Suina ANCESTRAL SPECIES 19 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255.q #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.f ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.q.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Pig MODERN SPECIES 9 WIPF3 (ENSSSCG00000016685) #8 PRR15 (ENSSSCG00000016686) CHN2 (ENSSSCG00000016687) #9 ENSSSCG00000060851 #9 CPVL (ENSSSCG00000016688) #10 CREB5 (ENSSSCG00000016690) #11 JAZF1 (ENSSSCG00000016691) #12 TAX1BP1 (ENSSSCG00000016692) #13 HIBADH (ENSSSCG00000016695) #14 EVX1 (ENSSSCG00000016696) #15 HOXA13 (ENSSSCG00000062559) #16 HOXA11 (ENSSSCG00000016698) #17 HOXA10 (ENSSSCG00000021204) #18 HOXA9 (ENSSSCG00000028997) #19 HOXA7 (ENSSSCG00000016701) #20 HOXA5 (ENSSSCG00000016703) #22 ENSSSCG00000016704 HOXA3 (ENSSSCG00000016705) #24 HOXA2 (ENSSSCG00000016706) #25 HOXA1 (ENSSSCG00000016707) #26 SKAP2 (ENSSSCG00000016708) #28 SNX10 (ENSSSCG00000037598) #29 CBX3 (ENSSSCG00000016711) ##30 ENSSSCG00000036350 ##31 NFE2L3 (ENSSSCG00000026894) #32 NPVF (ENSSSCG00000036611) #33 C7orf31 (ENSSSCG00000033313) #34 ENSSSCG00000034622 CYCS (ENSSSCG00000016714) OSBPL3 (ENSSSCG00000016715) #36 GSDME (ENSSSCG00000016716) #37 Chacoan peccary MODERN SPECIES 77 CHN2 (ENSCWAG00000007934) #9 ENSCWAG00000009158 CPVL (ENSCWAG00000009183) #10 TRIL (ENSCWAG00000009328) CREB5 (ENSCWAG00000009365) #11 JAZF1 (ENSCWAG00000009634) #12 TAX1BP1 (ENSCWAG00000009701) #13 HIBADH (ENSCWAG00000009934) #14 EVX1 (ENSCWAG00000009983) #15 HOXA13 (ENSCWAG00000010027) #16 HOXA11 (ENSCWAG00000010061) #17 HOXA10 (ENSCWAG00000010088) #18 HOXA9 (ENSCWAG00000000059) #19 HOXA7 (ENSCWAG00000000085) #20 HOXA6 (ENSCWAG00000000104) #21 HOXA5 (ENSCWAG00000000120) #22 ENSCWAG00000000132 #23 HOXA3 (ENSCWAG00000000149) #24 HOXA2 (ENSCWAG00000000162) #25 HOXA1 (ENSCWAG00000000172) #26 SKAP2 (ENSCWAG00000000198) #28 SNX10 (ENSCWAG00000000244) #29 ENSCWAG00000000333 ##30 HNRNPA2B1 (ENSCWAG00000000378) ##31 NFE2L3 (ENSCWAG00000000464) #32 NPVF (ENSCWAG00000000489) #33 C7orf31 (ENSCWAG00000000512) #34 ENSCWAG00000000536 ##35 OSBPL3 (ENSCWAG00000000578) #36 ENSCWAG00000000638 GSDME (ENSCWAG00000000655) #37 Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 Carnivora ANCESTRAL SPECIES 15 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00950000186003 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Caniformia ANCESTRAL SPECIES 11 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.l #13 ENSGT00950000186003 ENSGT00950000183025.b.a.k #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Caniformia_b ANCESTRAL SPECIES 9 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.l #13 ENSGT00950000186003 ENSGT00950000183025.b.a.k #13 ENSGT00940000155255 #14 ENSGT00930000152153 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.a #30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Ursidae ANCESTRAL SPECIES 12 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.l #13 ENSGT00950000186003 ENSGT00940000155255 #14 ENSGT00930000152153 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000153305.c.e.a #30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Ursus ANCESTRAL SPECIES 31 ENSGT00940000160267 #8 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.l #13 ENSGT00950000186003 ENSGT00940000155255 #14 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00940000154191.i.a ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000153305.c.e.a #30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 American black bear MODERN SPECIES 2134 HOXA11 (ENSUAMG00000014248) #17 ENSUAMG00000014247 HOXA9 (ENSUAMG00000014245) #19 HOXA7 (ENSUAMG00000014244) #20 HOXA6 (ENSUAMG00000014243) #21 HOXA5 (ENSUAMG00000014242) #22 HOXA4 (ENSUAMG00000014240) #23 HOXA3 (ENSUAMG00000014239) #24 HOXA2 (ENSUAMG00000014238) #25 HOXA1 (ENSUAMG00000014232) #26 ENSUAMG00000014231 Giant Panda MODERN SPECIES WIPF3 (ENSAMEG00000027321) #8 PRR15 (ENSAMEG00000018679) CHN2 (ENSAMEG00000005686) #9 CPVL (ENSAMEG00000005728) #10 CREB5 (ENSAMEG00000005779) #11 JAZF1 (ENSAMEG00000005798) #12 TAX1BP1 (ENSAMEG00000005802) #13 HIBADH (ENSAMEG00000005849) #14 ENSAMEG00000031450 HOXA13 (ENSAMEG00000024587) #16 HOXA11 (ENSAMEG00000027072) #17 HOXA10 (ENSAMEG00000031295) #18 HOXA9 (ENSAMEG00000005885) #19 HOXA7 (ENSAMEG00000005891) #20 HOXA6 (ENSAMEG00000005892) #21 HOXA5 (ENSAMEG00000024900) #22 ENSAMEG00000005902 #23 HOXA3 (ENSAMEG00000005904) #24 HOXA2 (ENSAMEG00000005913) #25 HOXA1 (ENSAMEG00000005924) #26 SKAP2 (ENSAMEG00000005928) #28 SNX10 (ENSAMEG00000005948) #29 ENSAMEG00000005969 #30 ENSAMEG00000005983 ##31 NFE2L3 (ENSAMEG00000006017) #32 NPVF (ENSAMEG00000006024) #33 C7orf31 (ENSAMEG00000006032) #34 ENSAMEG00000025231 CYCS (ENSAMEG00000006039) ##35 OSBPL3 (ENSAMEG00000006045) #36 GSDME (ENSAMEG00000006101) #37 Mustelinae ANCESTRAL SPECIES 9 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.k #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.a #30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 American mink MODERN SPECIES 24 ENSNVIG00000011513 CHN2 (ENSNVIG00000011534) #9 CPVL (ENSNVIG00000011645) #10 TRIL (ENSNVIG00000011660) CREB5 (ENSNVIG00000011671) #11 JAZF1 (ENSNVIG00000011775) #12 TAX1BP1 (ENSNVIG00000011815) #13 HIBADH (ENSNVIG00000012020) #14 EVX1 (ENSNVIG00000012041) #15 HOXA13 (ENSNVIG00000012062) #16 HOXA11 (ENSNVIG00000012100) #17 ENSNVIG00000012110 HOXA9 (ENSNVIG00000012124) #19 HOXA7 (ENSNVIG00000012126) #20 HOXA6 (ENSNVIG00000012136) #21 HOXA5 (ENSNVIG00000012142) #22 HOXA4 (ENSNVIG00000012149) #23 HOXA3 (ENSNVIG00000012162) #24 HOXA2 (ENSNVIG00000012184) #25 HOXA1 (ENSNVIG00000012214) #26 SKAP2 (ENSNVIG00000012244) #28 SNX10 (ENSNVIG00000012303) #29 ENSNVIG00000012362 #30 HNRNPA2B1 (ENSNVIG00000012375) ##31 NFE2L3 (ENSNVIG00000012449) #32 NPVF (ENSNVIG00000012461) #33 C7orf31 (ENSNVIG00000012476) #34 CYCS (ENSNVIG00000012505) ##35 OSBPL3 (ENSNVIG00000012516) #36 GSDME (ENSNVIG00000012676) #37 PALS2 (ENSNVIG00000012778) Ferret MODERN SPECIES 251 PRR15 (ENSMPUG00000019608) CHN2 (ENSMPUG00000004923) #9 CPVL (ENSMPUG00000004911) #10 TRIL (ENSMPUG00000019606) CREB5 (ENSMPUG00000004897) #11 JAZF1 (ENSMPUG00000004887) #12 TAX1BP1 (ENSMPUG00000004870) #13 HIBADH (ENSMPUG00000004863) #14 EVX1 (ENSMPUG00000004859) #15 HOXA13 (ENSMPUG00000004851) #16 HOXA11 (ENSMPUG00000004822) #17 HOXA10 (ENSMPUG00000004815) #18 HOXA9 (ENSMPUG00000004809) #19 HOXA7 (ENSMPUG00000004789) #20 HOXA6 (ENSMPUG00000004779) #21 HOXA5 (ENSMPUG00000004770) #22 HOXA4 (ENSMPUG00000004732) #23 HOXA3 (ENSMPUG00000004727) #24 HOXA2 (ENSMPUG00000004721) #25 HOXA1 (ENSMPUG00000004711) #26 SKAP2 (ENSMPUG00000004697) #28 SNX10 (ENSMPUG00000004686) #29 ENSMPUG00000004554 ##31 NFE2L3 (ENSMPUG00000004526) #32 ENSMPUG00000004517 NPVF (ENSMPUG00000004494) #33 C7orf31 (ENSMPUG00000004447) #34 Canidae ANCESTRAL SPECIES 22 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.k #13 ENSGT00940000155255 #14 ENSGT00930000152153 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Canis_lupus ANCESTRAL SPECIES 24 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.k #13 ENSGT00940000155255.s #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00570000080653 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Dog MODERN SPECIES 5 PRR15 (ENSCAFG00845018408) CHN2 (ENSCAFG00845017921) #9 CPVL (ENSCAFG00845017697) #10 TRIL (ENSCAFG00845017572) CREB5 (ENSCAFG00845017224) #11 JAZF1 (ENSCAFG00845017060) #12 TAX1BP1 (ENSCAFG00845016842) #13 ENSCAFG00845016422 #14 EVX1 (ENSCAFG00845016314) #15 HOXA13 (ENSCAFG00845016263) #16 HOXA11 (ENSCAFG00845016202) #17 HOXA10 (ENSCAFG00845016148) #18 HOXA9 (ENSCAFG00845011412) #19 HOXA7 (ENSCAFG00845011385) #20 HOXA6 (ENSCAFG00845011371) #21 HOXA5 (ENSCAFG00845011359) #22 HOXA4 (ENSCAFG00845011344) #23 HOXA3 (ENSCAFG00845011325) #24 HOXA2 (ENSCAFG00845011307) #25 HOXA1 (ENSCAFG00845011289) #26 SKAP2 (ENSCAFG00845011216) #28 ENSCAFG00845011197 SNX10 (ENSCAFG00845011117) #29 CBX3 (ENSCAFG00845011066) ##30 HNRNPA2B1 (ENSCAFG00845010976) ##31 NFE2L3 (ENSCAFG00845010931) #32 ENSCAFG00845010833 NPVF (ENSCAFG00845010780) #33 C14H7orf31 (ENSCAFG00845010734) #34 CYCS (ENSCAFG00845010713) ##35 OSBPL3 (ENSCAFG00845010396) #36 Dingo MODERN SPECIES 288 CHN2 (ENSCAFG00020003953) #9 CPVL (ENSCAFG00020003917) #10 TRIL (ENSCAFG00020003910) CREB5 (ENSCAFG00020003878) #11 JAZF1 (ENSCAFG00020003862) #12 TAX1BP1 (ENSCAFG00020003692) #13 ENSCAFG00020003683 ENSCAFG00020003671 #14 EVX1 (ENSCAFG00020003661) #15 HOXA13 (ENSCAFG00020003636) #16 HOXA11 (ENSCAFG00020003610) #17 HOXA10 (ENSCAFG00020003608) #18 HOXA9 (ENSCAFG00020003604) #19 HOXA7 (ENSCAFG00020003603) #20 HOXA6 (ENSCAFG00020003596) #21 HOXA5 (ENSCAFG00020003593) #22 HOXA4 (ENSCAFG00020003583) #23 HOXA3 (ENSCAFG00020003578) #24 HOXA2 (ENSCAFG00020003576) #25 HOXA1 (ENSCAFG00020003564) #26 ENSCAFG00020003544 SKAP2 (ENSCAFG00020003533) #28 SNX10 (ENSCAFG00020003504) #29 CBX3 (ENSCAFG00020003494) ##30 HNRNPA2B1 (ENSCAFG00020003488) ##31 NFE2L3 (ENSCAFG00020003483) #32 NPVF (ENSCAFG00020003466) #33 C7orf31 (ENSCAFG00020003415) #34 CYCS (ENSCAFG00020003401) ##35 OSBPL3 (ENSCAFG00020003002) #36 GSDME (ENSCAFG00020002948) #37 Red fox MODERN SPECIES 12 PRR15 (ENSVVUG00000024705) CHN2 (ENSVVUG00000024707) #9 CPVL (ENSVVUG00000024711) #10 CREB5 (ENSVVUG00000024727) #11 ENSVVUG00000024733 JAZF1 (ENSVVUG00000024738) #12 TAX1BP1 (ENSVVUG00000024747) #13 HIBADH (ENSVVUG00000024755) #14 ENSVVUG00000024762 HOXA13 (ENSVVUG00000024771) #16 HOXA11 (ENSVVUG00000024785) #17 HOXA10 (ENSVVUG00000024786) #18 HOXA9 (ENSVVUG00000024790) #19 HOXA7 (ENSVVUG00000024792) #20 HOXA6 (ENSVVUG00000024793) #21 HOXA5 (ENSVVUG00000024796) #22 ENSVVUG00000024797 #23 HOXA3 (ENSVVUG00000024799) #24 HOXA2 (ENSVVUG00000024801) #25 HOXA1 (ENSVVUG00000024810) #26 SKAP2 (ENSVVUG00000024816) #28 SNX10 (ENSVVUG00000000134) #29 CBX3 (ENSVVUG00000000259) ##30 HNRNPA2B1 (ENSVVUG00000000484) ##31 NFE2L3 (ENSVVUG00000000512) #32 NPVF (ENSVVUG00000000561) #33 CUNH7orf31 (ENSVVUG00000000577) #34 CYCS (ENSVVUG00000000599) ##35 OSBPL3 (ENSVVUG00000000677) #36 GSDME (ENSVVUG00000000725) #37 MPP6 (ENSVVUG00000000752) Felidae ANCESTRAL SPECIES 13 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.i.a #13 ENSGT00950000186003 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.n.a.a.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Panthera ANCESTRAL SPECIES 1 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.i.a #13 ENSGT00950000186003 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.n.a.a.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Panthera_a ANCESTRAL SPECIES ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a.i.a #13 ENSGT00950000186003 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b.n.a.a.a ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 lion MODERN SPECIES 2 CHN2 (ENSPLOG00000008386) #9 CPVL (ENSPLOG00000008266) #10 TRIL (ENSPLOG00000008245) CREB5 (ENSPLOG00000008070) #11 JAZF1 (ENSPLOG00000008017) #12 ENSPLOG00000007719 #13 ENSPLOG00000007659 HIBADH (ENSPLOG00000007638) #14 EVX1 (ENSPLOG00000007612) #15 HOXA13 (ENSPLOG00000007596) #16 HOXA11 (ENSPLOG00000007576) #17 ENSPLOG00000007559 HOXA9 (ENSPLOG00000007540) #19 HOXA7 (ENSPLOG00000007529) #20 HOXA6 (ENSPLOG00000007517) #21 HOXA5 (ENSPLOG00000007500) #22 HOXA4 (ENSPLOG00000007478) #23 HOXA3 (ENSPLOG00000007461) #24 HOXA2 (ENSPLOG00000007449) #25 HOXA1 (ENSPLOG00000007430) #26 SKAP2 (ENSPLOG00000007389) #28 SNX10 (ENSPLOG00000007289) #29 CBX3 (ENSPLOG00000007256) ##30 ENSPLOG00000007132 ##31 NFE2L3 (ENSPLOG00000007066) #32 NPVF (ENSPLOG00000007044) #33 C7orf31 (ENSPLOG00000007012) #34 ENSPLOG00000006975 ##35 OSBPL3 (ENSPLOG00000006925) #36 GSDME (ENSPLOG00000006850) #37 PALS2 (ENSPLOG00000006803) leopard MODERN SPECIES 9 CHN2 (ENSPPRG00000016803) #9 CPVL (ENSPPRG00000022917) #10 TRIL (ENSPPRG00000018769) CREB5 (ENSPPRG00000002554) #11 JAZF1 (ENSPPRG00000002975) #12 ENSPPRG00000006141 #13 ENSPPRG00000006269 HIBADH (ENSPPRG00000006612) #14 EVX1 (ENSPPRG00000007045) #15 HOXA13 (ENSPPRG00000007567) #16 HOXA11 (ENSPPRG00000008199) #17 HOXA10 (ENSPPRG00000009005) #18 HOXA9 (ENSPPRG00000009245) #19 HOXA7 (ENSPPRG00000009429) #20 HOXA6 (ENSPPRG00000009699) #21 HOXA5 (ENSPPRG00000009947) #22 HOXA4 (ENSPPRG00000010242) #23 HOXA3 (ENSPPRG00000010844) #24 HOXA2 (ENSPPRG00000011302) #25 HOXA1 (ENSPPRG00000011916) #26 SKAP2 (ENSPPRG00000012204) #28 SNX10 (ENSPPRG00000014532) #29 CBX3 (ENSPPRG00000016142) ##30 HNRNPA2B1 (ENSPPRG00000019212) ##31 NFE2L3 (ENSPPRG00000021279) #32 ENSPPRG00000022533 NPVF (ENSPPRG00000023448) #33 C7orf31 (ENSPPRG00000023165) #34 ENSPPRG00000000193 ##35 OSBPL3 (ENSPPRG00000006524) #36 GSDME (ENSPPRG00000008422) #37 Cat MODERN SPECIES 1 CHN2 (ENSFCAG00000008416) #9 CPVL (ENSFCAG00000011225) #10 TRIL (ENSFCAG00000044042) CREB5 (ENSFCAG00000015784) #11 JAZF1 (ENSFCAG00000023035) #12 TAX1BP1 (ENSFCAG00000006903) #13 ENSFCAG00000042564 HIBADH (ENSFCAG00000022490) #14 EVX1 (ENSFCAG00000023523) #15 HOXA13 (ENSFCAG00000041347) #16 HOXA11 (ENSFCAG00000007945) #17 HOXA10 (ENSFCAG00000025359) #18 HOXA9 (ENSFCAG00000036304) #19 HOXA7 (ENSFCAG00000022150) #20 HOXA6 (ENSFCAG00000034134) #21 HOXA5 (ENSFCAG00000045684) #22 HOXA4 (ENSFCAG00000035258) #23 HOXA3 (ENSFCAG00000028952) #24 HOXA2 (ENSFCAG00000007939) #25 HOXA1 (ENSFCAG00000007937) #26 SKAP2 (ENSFCAG00000025910) #28 SNX10 (ENSFCAG00000041224) #29 ENSFCAG00000034520 #30 HNRNPA2B1 (ENSFCAG00000027765) ##31 NFE2L3 (ENSFCAG00000031293) #32 NPVF (ENSFCAG00000008467) #33 CA2H7orf31 (ENSFCAG00000023175) #34 ENSFCAG00000036552 ##35 ENSFCAG00000034184 OSBPL3 (ENSFCAG00000010032) #36 GSDME (ENSFCAG00000014873) #37 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Chiroptera ANCESTRAL SPECIES 24 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00390000016010 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Megabat MODERN SPECIES 266 EVX1 (ENSPVAG00000002502) #15 HOXA11 (ENSPVAG00000002500) #17 HOXA10 (ENSPVAG00000002499) #18 HOXA9 (ENSPVAG00000002497) #19 HOXA7 (ENSPVAG00000002494) #20 HOXA6 (ENSPVAG00000002491) #21 HOXA5 (ENSPVAG00000002490) #22 HOXA4 (ENSPVAG00000002489) #23 ENSPVAG00000002487 HOXA3 (ENSPVAG00000002486) #24 HOXA2 (ENSPVAG00000002484) #25 HOXA1 (ENSPVAG00000002476) #26 SKAP2 (ENSPVAG00000002474) #28 ENSPVAG00000002471 Microchiroptera ANCESTRAL SPECIES 24 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.b ##35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Greater horseshoe bat MODERN SPECIES 12 CHN2 (ENSRFEG00010021162) #9 CPVL (ENSRFEG00010021218) #10 TRIL (ENSRFEG00010021231) CREB5 (ENSRFEG00010021242) #11 JAZF1 (ENSRFEG00010021278) #12 TAX1BP1 (ENSRFEG00010021292) #13 HIBADH (ENSRFEG00010021310) #14 ENSRFEG00010021318 EVX1 (ENSRFEG00010021329) #15 HOXA13 (ENSRFEG00010007129) #16 HOXA11 (ENSRFEG00010007153) #17 ENSRFEG00010007175 HOXA9 (ENSRFEG00010007211) #19 HOXA7 (ENSRFEG00010007246) #20 HOXA6 (ENSRFEG00010007277) #21 HOXA5 (ENSRFEG00010007299) #22 HOXA4 (ENSRFEG00010007327) #23 HOXA3 (ENSRFEG00010007370) #24 HOXA2 (ENSRFEG00010007382) #25 HOXA1 (ENSRFEG00010007395) #26 SKAP2 (ENSRFEG00010007437) #28 ENSRFEG00010007479 SNX10 (ENSRFEG00010007496) #29 CBX3 (ENSRFEG00010007556) ##30 HNRNPA2B1 (ENSRFEG00010007611) ##31 NFE2L3 (ENSRFEG00010007944) #32 ENSRFEG00010007962 NPVF (ENSRFEG00010007973) #33 C7orf31 (ENSRFEG00010008020) #34 ENSRFEG00010008111 ##35 OSBPL3 (ENSRFEG00010008157) #36 Microbat MODERN SPECIES 989 WIPF3 (ENSMLUG00000022962) #8 PRR15 (ENSMLUG00000007234) ENSMLUG00000013813 #9 CPVL (ENSMLUG00000013805) #10 TRIL (ENSMLUG00000026172) CREB5 (ENSMLUG00000013799) #11 JAZF1 (ENSMLUG00000013130) #12 TAX1BP1 (ENSMLUG00000013116) #13 HIBADH (ENSMLUG00000008346) #14 EVX1 (ENSMLUG00000007499) #15 HOXA13 (ENSMLUG00000008332) #16 HOXA11 (ENSMLUG00000008300) #17 ENSMLUG00000027272 HOXA7 (ENSMLUG00000008289) #20 HOXA6 (ENSMLUG00000014517) #21 HOXA5 (ENSMLUG00000028593) #22 ENSMLUG00000022220 ##23 HOXA3 (ENSMLUG00000014502) #24 HOXA2 (ENSMLUG00000014499) #25 HOXA1 (ENSMLUG00000014496) #26 ENSMLUG00000023915 #28 ENSMLUG00000014485 #28 SNX10 (ENSMLUG00000000285) #29 CBX3 (ENSMLUG00000007591) ##30 ENSMLUG00000007578 ##31 NFE2L3 (ENSMLUG00000007549) #32 ENSMLUG00000023699 C7orf31 (ENSMLUG00000016521) #34 ENSMLUG00000009521 ##35 OSBPL3 (ENSMLUG00000011152) #36 GSDME (ENSMLUG00000011133) #37 Equus ANCESTRAL SPECIES 13 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT01000000214669 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Donkey MODERN SPECIES PRR15 (ENSEASG00005027816) CHN2 (ENSEASG00005000230) #9 CPVL (ENSEASG00005000218) #10 TRIL (ENSEASG00005026075) CREB5 (ENSEASG00005000178) #11 JAZF1 (ENSEASG00005024824) #12 ENSEASG00005000155 #13 ENSEASG00005000084 HIBADH (ENSEASG00005000063) #14 EVX1 (ENSEASG00005000033) #15 HOXA13 (ENSEASG00005022194) #16 HOXA11 (ENSEASG00005022180) #17 HOXA10 (ENSEASG00005022176) #18 ENSEASG00005022172 #19 ENSEASG00005028567 #20 HOXA5 (ENSEASG00005034554) #22 HOXA3 (ENSEASG00005035791) #24 HOXA2 (ENSEASG00005033684) #25 HOXA1 (ENSEASG00005030120) #26 SKAP2 (ENSEASG00005022133) #28 SNX10 (ENSEASG00005022123) #29 CBX3 (ENSEASG00005022119) ##30 HNRNPA2B1 (ENSEASG00005022108) ##31 NFE2L3 (ENSEASG00005022104) #32 ENSEASG00005022095 NPVF (ENSEASG00005022093) #33 C7orf31 (ENSEASG00005022075) #34 CYCS (ENSEASG00005038171) OSBPL3 (ENSEASG00005022065) #36 GSDME (ENSEASG00005022048) #37 PALS2 (ENSEASG00005022041) Horse MODERN SPECIES 25 CPVL (ENSECAG00000024795) #10 TRIL (ENSECAG00000020808) CREB5 (ENSECAG00000020180) #11 ENSECAG00000055789 #11 JAZF1 (ENSECAG00000016817) #12 TAX1BP1 (ENSECAG00000001911) #13 ENSECAG00000054721 HIBADH (ENSECAG00000016863) #14 EVX1 (ENSECAG00000014337) #15 HOXA13 (ENSECAG00000038185) #16 HOXA11 (ENSECAG00000058817) #17 HOXA10 (ENSECAG00000012577) #18 HOXA9 (ENSECAG00000054482) #19 HOXA7 (ENSECAG00000054772) #20 HOXA6 (ENSECAG00000000575) #21 HOXA5 (ENSECAG00000000461) #22 HOXA3 (ENSECAG00000022055) #24 HOXA2 (ENSECAG00000000451) #25 HOXA1 (ENSECAG00000021767) #26 SKAP2 (ENSECAG00000020343) #28 SNX10 (ENSECAG00000013745) #29 HNRNPA2B1 (ENSECAG00000000782) ##31 NFE2L3 (ENSECAG00000021973) #32 ENSECAG00000058694 NPVF (ENSECAG00000021063) #33 C4H7orf31 (ENSECAG00000016478) #34 CYCS (ENSECAG00000014330) OSBPL3 (ENSECAG00000023989) #36 GSDME (ENSECAG00000021145) #37 PALS2 (ENSECAG00000009638) NPY (ENSECAG00000008726) Eulipotyphla ANCESTRAL SPECIES 84 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 Hedgehog DUPLICATION Hedgehog MODERN SPECIES 8857 ENSEEUG00000005567 #22 ENSEEUG00000005514 #23 Hedgehog MODERN SPECIES 16083 HOXA11 (ENSEEUG00000009724) #17 ENSEEUG00000009849 #18 HOXA9 (ENSEEUG00000009872) #19 ENSEEUG00000009904 #22 Common shrew MODERN SPECIES 549 HOXA9 (ENSSARG00000005576) #19 HOXA7 (ENSSARG00000005550) #20 HOXA5 (ENSSARG00000005548) #22 ENSSARG00000005529 #23 ENSSARG00000005474 Atlantogenata ANCESTRAL SPECIES 7 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Xenarthra ANCESTRAL SPECIES 763 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 Armadillo MODERN SPECIES 4801 HOXA7 (ENSDNOG00000048925) #20 HOXA6 (ENSDNOG00000001633) #21 HOXA5 (ENSDNOG00000034242) #22 HOXA3 (ENSDNOG00000033211) #24 HOXA2 (ENSDNOG00000010786) #25 HOXA1 (ENSDNOG00000047948) #26 SKAP2 (ENSDNOG00000048359) #28 Afrotheria ANCESTRAL SPECIES 5 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.e.b ##31 ENSGT00940000154431.f #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Afrotheria_a ANCESTRAL SPECIES 5 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.e.b ##30 ENSGT00940000154431.f #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Elephant MODERN SPECIES 428 CHN2 (ENSLAFG00000002595) #9 CPVL (ENSLAFG00000002811) #10 TRIL (ENSLAFG00000029935) CREB5 (ENSLAFG00000029453) #11 ENSLAFG00000027732 JAZF1 (ENSLAFG00000006942) #12 TAX1BP1 (ENSLAFG00000006940) #13 HIBADH (ENSLAFG00000013650) #14 EVX1 (ENSLAFG00000001942) #15 HOXA13 (ENSLAFG00000000738) #16 HOXA11 (ENSLAFG00000005482) #17 HOXA10 (ENSLAFG00000030920) #18 HOXA9 (ENSLAFG00000008970) #19 HOXA7 (ENSLAFG00000002101) #20 HOXA6 (ENSLAFG00000006281) #21 HOXA5 (ENSLAFG00000026981) #22 HOXA4 (ENSLAFG00000008965) #23 HOXA3 (ENSLAFG00000023253) #24 HOXA2 (ENSLAFG00000001565) #25 HOXA1 (ENSLAFG00000001615) #26 SKAP2 (ENSLAFG00000021410) #28 SNX10 (ENSLAFG00000008687) #29 ENSLAFG00000006907 ##30 HNRNPA2B1 (ENSLAFG00000006902) #31 NFE2L3 (ENSLAFG00000006898) #32 NPVF (ENSLAFG00000008838) #33 ENSLAFG00000023244 #34 CYCS (ENSLAFG00000006894) #35 OSBPL3 (ENSLAFG00000016197) #36 GSDME (ENSLAFG00000009797) #37 PALS2 (ENSLAFG00000009793) Hyrax MODERN SPECIES 658 HOXA7 (ENSPCAG00000015621) #20 HOXA6 (ENSPCAG00000015603) #21 HOXA5 (ENSPCAG00000015575) #22 ENSPCAG00000015510 HOXA3 (ENSPCAG00000015473) #24 Tenrec MODERN SPECIES 16016 HOXA6 (ENSETEG00000005146) #21 HOXA5 (ENSETEG00000005152) #22 Marsupialia ANCESTRAL SPECIES 4 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431.f #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431.f #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500.d Diprotodontia ANCESTRAL SPECIES 18 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431.f #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500.d Diprotodontia_a ANCESTRAL SPECIES 20 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000162322 #16 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585.a #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431.f #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405.e.b #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500.d Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1036 ENSVURG00010023054 ENSVURG00010023062 #9 ENSVURG00010023103 #10 ENSVURG00010023105 ENSVURG00010023109 #11 ENSVURG00010000094 #12 ENSVURG00010000109 #13 ENSVURG00010000176 #14 ENSVURG00010000187 #15 ENSVURG00010000199 #16 ENSVURG00010000215 #17 ENSVURG00010000225 ENSVURG00010000241 #19 ENSVURG00010000250 #20 ENSVURG00010000256 #21 ENSVURG00010000263 #22 ENSVURG00010000272 #23 ENSVURG00010000285 #24 ENSVURG00010000296 ENSVURG00010000303 #26 ENSVURG00010000328 #28 ENSVURG00010000381 #29 ENSVURG00010000437 #30 ENSVURG00010000471 #31 ENSVURG00010000522 #32 ENSVURG00010000563 #33 ENSVURG00010000574 #34 ENSVURG00010000608 ENSVURG00010000673 #36 ENSVURG00010000775 #37 ENSVURG00010000860 Common wonbat MODERN SPECIES 1036 ENSVURG00010018779 ENSVURG00010018812 #9 ENSVURG00010019508 #10 ENSVURG00010019537 ENSVURG00010019547 #11 ENSVURG00010019555 #12 ENSVURG00010019563 #13 ENSVURG00010019606 #14 ENSVURG00010019653 #15 ENSVURG00010019656 #16 ENSVURG00010019662 #17 HOXA10 (ENSVURG00010019671) #18 ENSVURG00010019686 #19 ENSVURG00010019687 #20 ENSVURG00010019692 #21 ENSVURG00010019698 #22 ENSVURG00010019706 #23 ENSVURG00010019713 #24 ENSVURG00010019721 ENSVURG00010019727 #26 ENSVURG00010019737 #28 ENSVURG00010019757 #29 ENSVURG00010019765 #30 ENSVURG00010019785 #31 ENSVURG00010019805 #32 ENSVURG00010019822 #33 ENSVURG00010019827 #34 ENSVURG00010019836 ENSVURG00010019854 #36 ENSVURG00010019898 #37 ENSVURG00010019917 koala MODERN SPECIES 50 SCRN1 (ENSPCIG00000019775) #7 WIPF3 (ENSPCIG00000034566) #8 CHN2 (ENSPCIG00000032230) #9 CPVL (ENSPCIG00000008535) #10 CREB5 (ENSPCIG00000005994) #11 JAZF1 (ENSPCIG00000002897) #12 TAX1BP1 (ENSPCIG00000002923) #13 HIBADH (ENSPCIG00000002993) #14 EVX1 (ENSPCIG00000013640) #15 HOXA13 (ENSPCIG00000013657) #16 HOXA11 (ENSPCIG00000013678) #17 ENSPCIG00000033721 HOXA9 (ENSPCIG00000013689) #19 HOXA7 (ENSPCIG00000013692) #20 HOXA6 (ENSPCIG00000037246) #21 HOXA5 (ENSPCIG00000013698) #22 ENSPCIG00000013701 #23 HOXA3 (ENSPCIG00000013705) #24 ENSPCIG00000013706 HOXA1 (ENSPCIG00000013712) #26 ENSPCIG00000032652 SKAP2 (ENSPCIG00000013715) #28 SNX10 (ENSPCIG00000013721) #29 ENSPCIG00000013724 #30 HNRNPA2B1 (ENSPCIG00000013729) #31 ENSPCIG00000022663 #33 ENSPCIG00000003201 #34 ENSPCIG00000003196 #35 OSBPL3 (ENSPCIG00000003096) #36 GSDME (ENSPCIG00000023065) #37 ENSPCIG00000023068 Wallaby MODERN SPECIES 13518 HOXA5 (ENSMEUG00000007118) #22 Opossum MODERN SPECIES 7 CHN2 (ENSMODG00000015321) #9 CPVL (ENSMODG00000015330) #10 TRIL (ENSMODG00000023951) CREB5 (ENSMODG00000015335) #11 ENSMODG00000047548 JAZF1 (ENSMODG00000000289) #12 ENSMODG00000000315 #13 HIBADH (ENSMODG00000000340) #14 EVX1 (ENSMODG00000000447) #15 HOXA13 (ENSMODG00000000449) #16 HOXA11 (ENSMODG00000000453) #17 HOXA10 (ENSMODG00000000463) #18 ENSMODG00000051224 HOXA7 (ENSMODG00000038697) #20 HOXA6 (ENSMODG00000000472) #21 HOXA5 (ENSMODG00000000483) #22 ENSMODG00000049221 #23 HOXA3 (ENSMODG00000000494) #24 HOXA2 (ENSMODG00000000502) #25 HOXA1 (ENSMODG00000000507) #26 SKAP2 (ENSMODG00000000521) #28 SNX10 (ENSMODG00000040432) #29 ENSMODG00000000572 ##30 HNRNPA2B1 (ENSMODG00000000603) #31 ENSMODG00000045075 #32 ENSMODG00000023944 ENSMODG00000000610 #33 ENSMODG00000000640 #34 CYCS (ENSMODG00000013402) #35 OSBPL3 (ENSMODG00000000723) #36 GSDME (ENSMODG00000000728) #37 Platypus MODERN SPECIES 19 ENSOANG00000008899 ENSOANG00000009180 #9 CPVL (ENSOANG00000009179) #10 TRIL (ENSOANG00000044975) CREB5 (ENSOANG00000009178) #11 JAZF1 (ENSOANG00000049457) #12 TAX1BP1 (ENSOANG00000009176) #13 HIBADH (ENSOANG00000044957) #14 ENSOANG00000009174 #15 HOXA13 (ENSOANG00000040975) #16 HOXA11 (ENSOANG00000045981) #17 HOXA10 (ENSOANG00000045760) #18 ENSOANG00000046469 HOXA7 (ENSOANG00000046422) #20 HOXA6 (ENSOANG00000009168) #21 HOXA5 (ENSOANG00000009167) #22 ENSOANG00000048692 #23 HOXA3 (ENSOANG00000009165) #24 ENSOANG00000009164 HOXA1 (ENSOANG00000050092) #26 SKAP2 (ENSOANG00000009162) #28 SNX10 (ENSOANG00000040490) #29 CBX3 (ENSOANG00000009160) #30 HNRNPA2B1 (ENSOANG00000009159) #31 ENSOANG00000009158 #32 ENSOANG00000031573 #33 ENSOANG00000036736 OSBPL3 (ENSOANG00000008434) #36 GSDME (ENSOANG00000008431) #37 PALS2 (ENSOANG00000008427) NPY (ENSOANG00000013383) Sauria ANCESTRAL SPECIES 15 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000164628 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Lepidosauria ANCESTRAL SPECIES 5 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Episquamata ANCESTRAL SPECIES 5 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Laterata ANCESTRAL SPECIES 10 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431.c.a #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Common wall lizard MODERN SPECIES 3 ENSPMRG00000020074 CHN2 (ENSPMRG00000017735) #9 CPVL (ENSPMRG00000017701) #10 TRIL (ENSPMRG00000017695) CREB5 (ENSPMRG00000017685) #11 JAZF1 (ENSPMRG00000017671) #12 TAX1BP1 (ENSPMRG00000017652) #13 HIBADH (ENSPMRG00000017641) #14 EVX1 (ENSPMRG00000017634) #15 ENSPMRG00000017625 HOXA11 (ENSPMRG00000017623) #17 ENSPMRG00000017621 ENSPMRG00000017615 HOXA7 (ENSPMRG00000017611) #20 HOXA6 (ENSPMRG00000017607) #21 HOXA5 (ENSPMRG00000017598) #22 HOXA4 (ENSPMRG00000017592) #23 HOXA3 (ENSPMRG00000017585) #24 HOXA2 (ENSPMRG00000017583) #25 HOXA1 (ENSPMRG00000017575) #26 SKAP2 (ENSPMRG00000017570) #28 SNX10 (ENSPMRG00000017558) #29 ENSPMRG00000017549 #30 ENSPMRG00000017543 #30 HNRNPA2B1 (ENSPMRG00000017534) #31 ENSPMRG00000017526 #32 ENSPMRG00000017520 NPVF (ENSPMRG00000017514) #33 ENSPMRG00000017506 #35 OSBPL3 (ENSPMRG00000017481) #36 GSDME (ENSPMRG00000017465) #37 Argentine black and white tegu MODERN SPECIES 5 CHN2 (ENSSMRG00000002579) #9 ENSSMRG00000002597 CPVL (ENSSMRG00000002600) #10 TRIL (ENSSMRG00000002616) CREB5 (ENSSMRG00000002892) #11 JAZF1 (ENSSMRG00000002932) #12 TAX1BP1 (ENSSMRG00000002937) #13 HIBADH (ENSSMRG00000002954) #14 EVX1 (ENSSMRG00000002969) #15 ENSSMRG00000002987 HOXA11 (ENSSMRG00000003000) #17 HOXA10 (ENSSMRG00000003005) #18 HOXA9 (ENSSMRG00000003009) #19 HOXA7 (ENSSMRG00000003016) #20 HOXA6 (ENSSMRG00000003020) #21 HOXA5 (ENSSMRG00000003023) #22 HOXA4 (ENSSMRG00000003027) #23 HOXA3 (ENSSMRG00000003029) #24 ENSSMRG00000003064 HOXA1 (ENSSMRG00000003080) #26 SKAP2 (ENSSMRG00000003082) #28 SNX10 (ENSSMRG00000003170) #29 CBX3 (ENSSMRG00000003213) #30 ENSSMRG00000003215 #31 NPVF (ENSSMRG00000003304) #33 ENSSMRG00000003337 #34 ENSSMRG00000003338 OSBPL3 (ENSSMRG00000003340) #36 GSDME (ENSSMRG00000003361) #37 PALS2 (ENSSMRG00000003371) NPY (ENSSMRG00000003394) Toxicofera ANCESTRAL SPECIES 4 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES 5 ENSGT00940000160267 #8 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894.a #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Elapidae_a ANCESTRAL SPECIES 19 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894.a #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Acanthophiinae ANCESTRAL SPECIES 19 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628.cb ENSGT00940000161864 #19 ENSGT00940000161013.e #20 ENSGT00940000161585 #21 ENSGT00940000159894.a #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Mainland tiger snake MODERN SPECIES 55 CPVL (ENSNSUG00000011672) #10 TRIL (ENSNSUG00000011812) CREB5 (ENSNSUG00000011813) #11 ENSNSUG00000011815 ENSNSUG00000011816 #13 ENSNSUG00000011817 #13 HIBADH (ENSNSUG00000011818) #14 EVX1 (ENSNSUG00000011819) #15 ENSNSUG00000011820 HOXA11 (ENSNSUG00000011822) #17 ENSNSUG00000011823 ENSNSUG00000011824 ENSNSUG00000011828 ENSNSUG00000011829 #20 HOXA6 (ENSNSUG00000011830) #21 ENSNSUG00000011832 #22 HOXA4 (ENSNSUG00000011833) #23 HOXA3 (ENSNSUG00000011834) #24 ENSNSUG00000011835 HOXA1 (ENSNSUG00000011837) #26 SKAP2 (ENSNSUG00000011838) #28 SNX10 (ENSNSUG00000011839) #29 CBX3 (ENSNSUG00000011840) #30 HNRNPA2B1 (ENSNSUG00000011841) #31 ENSNSUG00000011842 #32 NPVF (ENSNSUG00000011844) #33 ENSNSUG00000011845 #34 CYCS (ENSNSUG00000011846) #35 OSBPL3 (ENSNSUG00000011847) #36 GSDME (ENSNSUG00000011848) #37 PALS2 (ENSNSUG00000011849) Eastern brown snake MODERN SPECIES 38 CHN2 (ENSPTXG00000004466) #9 CPVL (ENSPTXG00000004473) #10 TRIL (ENSPTXG00000004476) CREB5 (ENSPTXG00000004478) #11 JAZF1 (ENSPTXG00000004479) #12 TAX1BP1 (ENSPTXG00000004481) #13 HIBADH (ENSPTXG00000004483) #14 EVX1 (ENSPTXG00000004485) #15 ENSPTXG00000004487 HOXA11 (ENSPTXG00000004488) #17 ENSPTXG00000004489 ENSPTXG00000004491 HOXA9 (ENSPTXG00000004493) #19 ENSPTXG00000004494 #20 HOXA6 (ENSPTXG00000004495) #21 HOXA5 (ENSPTXG00000004496) #22 HOXA4 (ENSPTXG00000004497) #23 HOXA3 (ENSPTXG00000004498) #24 HOXA2 (ENSPTXG00000004499) #25 HOXA1 (ENSPTXG00000004500) #26 SKAP2 (ENSPTXG00000004501) #28 SNX10 (ENSPTXG00000004502) #29 CBX3 (ENSPTXG00000004503) #30 HNRNPA2B1 (ENSPTXG00000004504) #31 ENSPTXG00000004505 #32 Blue-lipped sea krait MODERN SPECIES 2437 ENSLLTG00000005579 HOXA11 (ENSLLTG00000005576) #17 ENSLLTG00000005573 ENSLLTG00000005570 HOXA9 (ENSLLTG00000005561) #19 HOXA7 (ENSLLTG00000005559) #20 HOXA6 (ENSLLTG00000005554) #21 HOXA5 (ENSLLTG00000005542) #22 Indian cobra MODERN SPECIES 337 ENSNNAG00000014715 #9 CPVL (ENSNNAG00000014691) #10 TRIL (ENSNNAG00000014682) CREB5 (ENSNNAG00000014560) #11 ENSNNAG00000014538 TAX1BP1 (ENSNNAG00000014466) #13 HIBADH (ENSNNAG00000014431) #14 EVX1 (ENSNNAG00000014415) #15 ENSNNAG00000014406 HOXA11 (ENSNNAG00000014398) #17 ENSNNAG00000014386 ENSNNAG00000014380 HOXA9 (ENSNNAG00000014351) #19 HOXA7 (ENSNNAG00000014339) #20 HOXA6 (ENSNNAG00000014321) #21 HOXA5 (ENSNNAG00000014305) #22 HOXA4 (ENSNNAG00000014295) #23 HOXA3 (ENSNNAG00000014285) #24 HOXA2 (ENSNNAG00000014269) #25 HOXA1 (ENSNNAG00000014242) #26 SKAP2 (ENSNNAG00000014205) #28 SNX10 (ENSNNAG00000014179) #29 ENSNNAG00000014145 ##30 HNRNPA2B1 (ENSNNAG00000014096) #31 ENSNNAG00000014084 #32 NPVF (ENSNNAG00000014051) #33 ENSNNAG00000014041 #34 CYCS (ENSNNAG00000014033) #35 OSBPL3 (ENSNNAG00000013989) #36 GSDME (ENSNNAG00000013970) #37 PALS2 (ENSNNAG00000013940) Elapidae ANCESTRAL SPECIES ENSGT00940000159894.b #22 Elapidae_a ANCESTRAL SPECIES ENSGT00940000159894.b #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000159894.b #22 Mainland tiger snake MODERN SPECIES 919 ENSNSUG00000006781 #22 Lizard MODERN SPECIES 889 CHN2 (ENSACAG00000007001) #9 ENSACAG00000044555 CPVL (ENSACAG00000007086) #10 TRIL (ENSACAG00000007137) CREB5 (ENSACAG00000007144) #11 JAZF1 (ENSACAG00000036341) #12 TAX1BP1 (ENSACAG00000007204) #13 HIBADH (ENSACAG00000007238) #14 EVX1 (ENSACAG00000045517) #15 ENSACAG00000010302 HOXA11 (ENSACAG00000010304) #17 ENSACAG00000010315 ENSACAG00000007286 HOXA7 (ENSACAG00000010322) #20 HOXA6 (ENSACAG00000010349) #21 HOXA5 (ENSACAG00000010364) #22 HOXA4 (ENSACAG00000010390) #23 HOXA3 (ENSACAG00000041421) #24 HOXA2 (ENSACAG00000010430) #25 HOXA1 (ENSACAG00000010967) #26 ENSACAG00000037914 SKAP2 (ENSACAG00000010455) #28 tuatara MODERN SPECIES 1419 AK3 (ENSSPUG00000016335) RCL1 (ENSSPUG00000016330) JAK2 (ENSSPUG00000016313) PLGRKT (ENSSPUG00000016305) CD274 (ENSSPUG00000016298) PDCD1LG2 (ENSSPUG00000016280) RIC1 (ENSSPUG00000016199) ERMP1 (ENSSPUG00000016138) HIBADH (ENSSPUG00000016127) #14 ENSSPUG00000016102 HOXA11 (ENSSPUG00000016087) #17 ENSSPUG00000016084 HOXA9 (ENSSPUG00000016079) #19 HOXA7 (ENSSPUG00000016072) #20 HOXA6 (ENSSPUG00000016069) #21 HOXA5 (ENSSPUG00000016064) #22 HOXA4 (ENSSPUG00000016059) #23 HOXA3 (ENSSPUG00000016056) #24 HOXA2 (ENSSPUG00000016047) #25 HOXA1 (ENSSPUG00000016023) #26 SKAP2 (ENSSPUG00000016009) #28 SNX10 (ENSSPUG00000016000) #29 CBX3 (ENSSPUG00000015990) #30 HNRNPA2B1 (ENSSPUG00000015955) #31 ENSSPUG00000015947 NPVF (ENSSPUG00000015924) #33 C7orf31 (ENSSPUG00000015902) #34 ENSSPUG00000015896 #35 Archelosauria ANCESTRAL SPECIES 6 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Cryptodira ANCESTRAL SPECIES 4 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000162440 #18 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Emydidae ANCESTRAL SPECIES 40 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000161864 #19 ENSGT00940000162440 #18 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a painted turtle MODERN SPECIES 7 CHN2 (ENSCPBG00000022522) #9 CPVL (ENSCPBG00000022520) #10 TRIL (ENSCPBG00000022519) CREB5 (ENSCPBG00000022518) #11 JAZF1 (ENSCPBG00000022514) #12 TAX1BP1 (ENSCPBG00000022513) #13 HIBADH (ENSCPBG00000022512) #14 EVX1 (ENSCPBG00000022511) #15 ENSCPBG00000022510 HOXA11 (ENSCPBG00000022506) #17 ENSCPBG00000022505 HOXA10 (ENSCPBG00000022503) #18 ENSCPBG00000022501 HOXA7 (ENSCPBG00000022500) #20 HOXA6 (ENSCPBG00000022499) #21 HOXA5 (ENSCPBG00000022498) #22 HOXA4 (ENSCPBG00000022497) #23 HOXA3 (ENSCPBG00000022496) #24 ENSCPBG00000022495 HOXA1 (ENSCPBG00000022493) #26 SKAP2 (ENSCPBG00000022490) #28 SNX10 (ENSCPBG00000022488) #29 CBX3 (ENSCPBG00000022487) #30 HNRNPA2B1 (ENSCPBG00000022485) #31 NFE2L3 (ENSCPBG00000022484) #32 NPVF (ENSCPBG00000022481) #33 C7orf31 (ENSCPBG00000022480) #34 ENSCPBG00000022479 OSBPL3 (ENSCPBG00000022476) #36 GSDME (ENSCPBG00000022474) #37 PALS2 (ENSCPBG00000022473) Three-toed box turtle MODERN SPECIES 30 CPVL (ENSTMTG00000002952) #10 TRIL (ENSTMTG00000002957) CREB5 (ENSTMTG00000002964) #11 ENSTMTG00000003001 JAZF1 (ENSTMTG00000003004) #12 TAX1BP1 (ENSTMTG00000003013) #13 HIBADH (ENSTMTG00000003026) #14 EVX1 (ENSTMTG00000003036) #15 ENSTMTG00000003045 HOXA11 (ENSTMTG00000003050) #17 ENSTMTG00000003062 ENSTMTG00000003069 HOXA9 (ENSTMTG00000003072) #19 HOXA7 (ENSTMTG00000003084) #20 HOXA6 (ENSTMTG00000003094) #21 HOXA5 (ENSTMTG00000003104) #22 HOXA4 (ENSTMTG00000003107) #23 HOXA3 (ENSTMTG00000003112) #24 ENSTMTG00000003122 HOXA1 (ENSTMTG00000003132) #26 SKAP2 (ENSTMTG00000003145) #28 SNX10 (ENSTMTG00000003161) #29 CBX3 (ENSTMTG00000003179) #30 HNRNPA2B1 (ENSTMTG00000003199) #31 NFE2L3 (ENSTMTG00000003209) #32 NPVF (ENSTMTG00000003221) #33 C7orf31 (ENSTMTG00000003235) #34 ENSTMTG00000003246 OSBPL3 (ENSTMTG00000003312) #36 GSDME (ENSTMTG00000004558) #37 PALS2 (ENSTMTG00000004579) Testudinidae ANCESTRAL SPECIES 1 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000012195.ib ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 Abingdon island giant tortoise MODERN SPECIES 331 CREB5 (ENSCABG00000019465) #11 ENSCABG00000019502 JAZF1 (ENSCABG00000019505) #12 TAX1BP1 (ENSCABG00000019507) #13 HIBADH (ENSCABG00000019511) #14 EVX1 (ENSCABG00000019516) #15 ENSCABG00000019521 HOXA11 (ENSCABG00000019527) #17 ENSCABG00000019529 ENSCABG00000019531 HOXA7 (ENSCABG00000019533) #20 HOXA6 (ENSCABG00000019534) #21 HOXA5 (ENSCABG00000019535) #22 HOXA4 (ENSCABG00000019537) #23 HOXA3 (ENSCABG00000019539) #24 ENSCABG00000000006 HOXA1 (ENSCABG00000000045) #26 SKAP2 (ENSCABG00000000106) #28 SNX10 (ENSCABG00000000122) #29 ENSCABG00000000131 CBX3 (ENSCABG00000000136) #30 HNRNPA2B1 (ENSCABG00000000155) #31 ENSCABG00000000172 NPVF (ENSCABG00000000177) #33 C7orf31 (ENSCABG00000000219) #34 ENSCABG00000000434 OSBPL3 (ENSCABG00000000455) #36 GSDME (ENSCABG00000000465) #37 Goode s thornscrub tortoise MODERN SPECIES 11 CPVL (ENSGEVG00005006761) #10 TRIL (ENSGEVG00005006732) ENSGEVG00005006725 CREB5 (ENSGEVG00005019423) #11 JAZF1 (ENSGEVG00005019395) #12 TAX1BP1 (ENSGEVG00005019322) #13 HIBADH (ENSGEVG00005019295) #14 EVX1 (ENSGEVG00005019282) #15 ENSGEVG00005019278 HOXA11 (ENSGEVG00005019271) #17 ENSGEVG00005019266 ENSGEVG00005019258 HOXA9 (ENSGEVG00005019248) #19 HOXA6 (ENSGEVG00005019245) #21 HOXA7 (ENSGEVG00005019234) #20 HOXA5 (ENSGEVG00005019226) #22 HOXA4 (ENSGEVG00005019219) #23 HOXA3 (ENSGEVG00005019211) #24 HOXA2 (ENSGEVG00005019207) #25 HOXA1 (ENSGEVG00005019200) #26 SKAP2 (ENSGEVG00005019183) #28 SNX10 (ENSGEVG00005019170) #29 CBX3 (ENSGEVG00005019156) #30 HNRNPA2B1 (ENSGEVG00005019139) #31 NFE2L3 (ENSGEVG00005019114) #32 ENSGEVG00005019085 NPVF (ENSGEVG00005019080) #33 C7orf31 (ENSGEVG00005018969) #34 ENSGEVG00005018937 OSBPL3 (ENSGEVG00005018914) #36 GSDME (ENSGEVG00005018894) #37 Chinese turtle MODERN SPECIES 2225 EVX1 (ENSPSIG00000002768) #15 ENSPSIG00000002765 HOXA11 (ENSPSIG00000002763) #17 HOXA10 (ENSPSIG00000000728) #18 HOXA9 (ENSPSIG00000002761) #19 HOXA7 (ENSPSIG00000002758) #20 HOXA5 (ENSPSIG00000002746) #22 HOXA4 (ENSPSIG00000002742) #23 HOXA3 (ENSPSIG00000002737) #24 HOXA1 (ENSPSIG00000002734) #26 ENSPSIG00000000719 SKAP2 (ENSPSIG00000002701) #28 SNX10 (ENSPSIG00000002687) #29 CBX3 (ENSPSIG00000002665) #30 HNRNPA2B1 (ENSPSIG00000002659) #31 NFE2L3 (ENSPSIG00000017996) #32 NPVF (ENSPSIG00000017952) #33 C7orf31 (ENSPSIG00000017929) #34 ENSPSIG00000017925 OSBPL3 (ENSPSIG00000017569) #36 GSDME (ENSPSIG00000017077) #37 PALS2 (ENSPSIG00000016529) Archosauria ANCESTRAL SPECIES ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Australian saltwater crocodile MODERN SPECIES CPVL (ENSCPRG00005000643) #10 ENSCPRG00005000637 ENSCPRG00005000571 CREB5 (ENSCPRG00005000565) #11 JAZF1 (ENSCPRG00005000395) #12 TAX1BP1 (ENSCPRG00005000237) #13 HIBADH (ENSCPRG00005016123) #14 ENSCPRG00005016118 ENSCPRG00005016115 HOXA11 (ENSCPRG00005016107) #17 ENSCPRG00005016104 HOXA10 (ENSCPRG00005016102) #18 ENSCPRG00005016101 HOXA7 (ENSCPRG00005016099) #20 HOXA6 (ENSCPRG00005016098) #21 HOXA5 (ENSCPRG00005016097) #22 HOXA4 (ENSCPRG00005016095) #23 HOXA3 (ENSCPRG00005016093) #24 ENSCPRG00005016091 HOXA1 (ENSCPRG00005016088) #26 SKAP2 (ENSCPRG00005016086) #28 ENSCPRG00005016077 SNX10 (ENSCPRG00005016075) #29 CBX3 (ENSCPRG00005016073) #30 HNRNPA2B1 (ENSCPRG00005016066) #31 NFE2L3 (ENSCPRG00005016059) #32 NPVF (ENSCPRG00005016052) #33 C7orf31 (ENSCPRG00005016048) #34 ENSCPRG00005016039 OSBPL3 (ENSCPRG00005016013) #36 GSDME (ENSCPRG00005016004) #37 Aves ANCESTRAL SPECIES 5 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Neognathae ANCESTRAL SPECIES ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Galloanserae ANCESTRAL SPECIES ENSGT00940000160267 #8 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 ENSGT00940000156475 Anatidae ANCESTRAL SPECIES 1 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000162440 #18 ENSGT00940000161864 #19 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 ENSGT00940000156475 Duck MODERN SPECIES 10 WIPF3 (ENSAPLG00000028949) #8 ENSAPLG00000021266 CHN2 (ENSAPLG00000004770) #9 TRIL (ENSAPLG00000027101) CREB5 (ENSAPLG00000004960) #11 JAZF1 (ENSAPLG00000014482) #12 TAX1BP1 (ENSAPLG00000010659) #13 HIBADH (ENSAPLG00000010878) #14 EVX1 (ENSAPLG00000020631) #15 HOXA11 (ENSAPLG00000011282) #17 ENSAPLG00000026443 ENSAPLG00000011292 ENSAPLG00000027301 HOXA7 (ENSAPLG00000011313) #20 HOXA6 (ENSAPLG00000011384) #21 HOXA5 (ENSAPLG00000022394) #22 HOXA4 (ENSAPLG00000011410) #23 HOXA3 (ENSAPLG00000022676) #24 ENSAPLG00000011540 SKAP2 (ENSAPLG00000020344) #28 SNX10 (ENSAPLG00000011904) #29 CBX3 (ENSAPLG00000011969) #30 HNRNPA2B1 (ENSAPLG00000012019) #31 NPVF (ENSAPLG00000011937) #33 C7orf31 (ENSAPLG00000012025) #34 CYCS (ENSAPLG00000017045) #35 OSBPL3 (ENSAPLG00000015336) #36 GSDME (ENSAPLG00000014944) #37 PALS2 (ENSAPLG00000014575) NPY (ENSAPLG00000014559) STK31 (ENSAPLG00000014105) Pink-footed goose MODERN SPECIES WIPF3 (ENSABRG00000009966) #8 ENSABRG00000009970 CHN2 (ENSABRG00000009976) #9 TRIL (ENSABRG00000009999) CREB5 (ENSABRG00000010020) #11 JAZF1 (ENSABRG00000010106) #12 TAX1BP1 (ENSABRG00000010126) #13 HIBADH (ENSABRG00000010163) #14 EVX1 (ENSABRG00000010188) #15 ENSABRG00000010197 HOXA11 (ENSABRG00000010207) #17 HOXA10 (ENSABRG00000010211) #18 HOXA9 (ENSABRG00000010216) #19 HOXA7 (ENSABRG00000010221) #20 HOXA6 (ENSABRG00000010225) #21 HOXA5 (ENSABRG00000010228) #22 HOXA4 (ENSABRG00000010230) #23 HOXA3 (ENSABRG00000010233) #24 ENSABRG00000010239 HOXA1 (ENSABRG00000010242) #26 SKAP2 (ENSABRG00000010253) #28 SNX10 (ENSABRG00000010263) #29 CBX3 (ENSABRG00000010267) #30 HNRNPA2B1 (ENSABRG00000010273) #31 NPVF (ENSABRG00000010288) #33 CYCS (ENSABRG00000010310) #35 OSBPL3 (ENSABRG00000010359) #36 GSDME (ENSABRG00000010392) #37 PALS2 (ENSABRG00000010416) NPY (ENSABRG00000010432) ENSABRG00000010444 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000160267 #8 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 ENSGT00940000156475 Japanese quail MODERN SPECIES 11 CHN2 (ENSCJPG00005012556) #9 TRIL (ENSCJPG00005012555) CREB5 (ENSCJPG00005012554) #11 ENSCJPG00005012552 #11 JAZF1 (ENSCJPG00005012550) #12 TAX1BP1 (ENSCJPG00005012549) #13 HIBADH (ENSCJPG00005012548) #14 EVX1 (ENSCJPG00005012544) #15 ENSCJPG00005012542 ENSCJPG00005012539 HOXA11 (ENSCJPG00005012535) #17 HOXA10 (ENSCJPG00005012534) #18 ENSCJPG00005012532 HOXA7 (ENSCJPG00005012531) #20 HOXA6 (ENSCJPG00005012530) #21 HOXA5 (ENSCJPG00005012529) #22 HOXA4 (ENSCJPG00005012528) #23 HOXA3 (ENSCJPG00005012527) #24 ENSCJPG00005012526 HOXA1 (ENSCJPG00005012524) #26 SKAP2 (ENSCJPG00005012522) #28 SNX10 (ENSCJPG00005012520) #29 CBX3 (ENSCJPG00005012519) #30 HNRNPA2B1 (ENSCJPG00005012518) #31 NPVF (ENSCJPG00005012514) #33 C7orf31 (ENSCJPG00005012513) #34 ENSCJPG00005012512 OSBPL3 (ENSCJPG00005012510) #36 GSDME (ENSCJPG00005012509) #37 PALS2 (ENSCJPG00005012508) NPY (ENSCJPG00005012506) Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000160267 #8 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 ENSGT00940000156475 Chicken MODERN SPECIES 11 ENSGALG00010002631 CHN2 (ENSGALG00010001585) #9 CHN2 (ENSGALG00010002992) #9 TRIL (ENSGALG00010001716) CREB5 (ENSGALG00010001711) #11 JAZF1 (ENSGALG00010001458) #12 TAX1BP1 (ENSGALG00010001453) #13 HIBADH (ENSGALG00010001363) #14 EVX1 (ENSGALG00010001589) #15 HOXA13 (ENSGALG00010001321) HOXA11 (ENSGALG00010001848) #17 HOXA10 (ENSGALG00010001844) #18 HOXA9 (ENSGALG00010001840) HOXA7 (ENSGALG00010001826) #20 HOXA6 (ENSGALG00010001819) #21 HOXA5 (ENSGALG00010001813) #22 HOXA4 (ENSGALG00010001808) #23 HOXA3 (ENSGALG00010001801) #24 HOXA2 (ENSGALG00010001790) HOXA1 (ENSGALG00010001788) #26 SKAP2 (ENSGALG00010001906) #28 SNX10 (ENSGALG00010001888) #29 CBX3 (ENSGALG00010001861) #30 HNRNPA2B1 (ENSGALG00010001857) #31 NPVF (ENSGALG00010001348) #33 C7orf31 (ENSGALG00010001336) #34 CYCS (ENSGALG00010002409) #35 OSBPL3 (ENSGALG00010002404) #36 DFNA5 (ENSGALG00010002392) #37 PALS2 (ENSGALG00010002385) NPY (ENSGALG00010002375) Turkey MODERN SPECIES 26 ENSMGAG00000011127 EOMES (ENSMGAG00000011118) SLC4A7 (ENSMGAG00000011120) ENSMGAG00000011114 LRRC3B (ENSMGAG00000011112) OXSM (ENSMGAG00000011111) NGLY1 (ENSMGAG00000011100) TOP2B (ENSMGAG00000011069) RARB (ENSMGAG00000011041) THRB (ENSMGAG00000011036) NR1D2 (ENSMGAG00000011018) RPL15 (ENSMGAG00000011013) NKIRAS1 (ENSMGAG00000011005) UBE2E2 (ENSMGAG00000010994) ENSMGAG00000021315 ENSMGAG00000022722 #22 ENSMGAG00000017923 #20 ENSMGAG00000017085 ENSMGAG00000016085 ENSMGAG00000020364 #17 ENSMGAG00000010703 #15 ENSMGAG00000010706 #14 ENSMGAG00000019096 #13 ENSMGAG00000010713 #13 ENSMGAG00000020612 #12 ENSMGAG00000017596 #11 ENSMGAG00000010729 #11 ENSMGAG00000010740 ENSMGAG00000019537 #9 CHN2 (ENSMGAG00000010748) #9 ENSMGAG00000010774 #7 Neognathae_b ANCESTRAL SPECIES 9 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 Passeriformes ANCESTRAL SPECIES ENSGT01030000235471 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 ENSGT00940000156475 Passeriformes_d ANCESTRAL SPECIES ENSGT01030000235471 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.b #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 ENSGT00940000156475 Flycatcher MODERN SPECIES 11 ENSFALG00000023338 CHN2 (ENSFALG00000009343) #9 ENSFALG00000027482 ENSFALG00000026141 CREB5 (ENSFALG00000009349) #11 JAZF1 (ENSFALG00000026296) #12 TAX1BP1 (ENSFALG00000009370) #13 HIBADH (ENSFALG00000009376) #14 EVX1 (ENSFALG00000009382) #15 ENSFALG00000009407 HOXA11 (ENSFALG00000027023) #17 HOXA10 (ENSFALG00000009427) #18 ENSFALG00000026888 HOXA7 (ENSFALG00000028847) #20 HOXA6 (ENSFALG00000009450) #21 HOXA5 (ENSFALG00000023279) #22 HOXA4 (ENSFALG00000028918) #23 HOXA3 (ENSFALG00000009475) #24 ENSFALG00000009483 HOXA1 (ENSFALG00000009490) #26 SKAP2 (ENSFALG00000009503) #28 SNX10 (ENSFALG00000027903) #29 CBX3 (ENSFALG00000025544) #30 HNRNPA2B1 (ENSFALG00000009527) #31 NFE2L3 (ENSFALG00000009537) #32 NPVF (ENSFALG00000026729) #33 ENSFALG00000027395 OSBPL3 (ENSFALG00000009555) #36 GSDME (ENSFALG00000009568) #37 PALS2 (ENSFALG00000009571) NPY (ENSFALG00000014449) Passeriformes_g ANCESTRAL SPECIES 6 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c.b #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000009405 #35 ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 ENSGT00940000156475 Passeroidea ANCESTRAL SPECIES 158 ENSGT00940000161585 #21 ENSGT00940000159894 #22 Common canary MODERN SPECIES 5 SCRN1 (ENSSCAG00000015131) #7 WIPF3 (ENSSCAG00000015128) #8 ENSSCAG00000015122 CHN2 (ENSSCAG00000015120) #9 ENSSCAG00000015114 CREB5 (ENSSCAG00000015109) #11 JAZF1 (ENSSCAG00000015103) #12 TAX1BP1 (ENSSCAG00000015090) #13 HIBADH (ENSSCAG00000015082) #14 EVX1 (ENSSCAG00000015076) #15 HOXA13 (ENSSCAG00000015071) #16 HOXA11 (ENSSCAG00000015063) #17 HOXA10 (ENSSCAG00000015059) #18 ENSSCAG00000015054 HOXA6 (ENSSCAG00000015051) #21 HOXA5 (ENSSCAG00000015048) #22 HOXA7 (ENSSCAG00000015045) #20 HOXA4 (ENSSCAG00000015041) #23 HOXA3 (ENSSCAG00000015039) #24 ENSSCAG00000015032 HOXA1 (ENSSCAG00000015025) #26 SKAP2 (ENSSCAG00000015012) #28 SNX10 (ENSSCAG00000015004) #29 CBX3 (ENSSCAG00000014999) #30 HNRNPA2B1 (ENSSCAG00000014987) #31 NFE2L3 (ENSSCAG00000014982) #32 NPVF (ENSSCAG00000014977) #33 CYCS (ENSSCAG00000014973) #35 OSBPL3 (ENSSCAG00000014962) #36 GSDME (ENSSCAG00000014957) #37 PALS2 (ENSSCAG00000014952) Zebra finch MODERN SPECIES 12 SCRN1 (ENSTGUG00000002975) #7 WIPF3 (ENSTGUG00000002969) #8 ENSTGUG00000026485 CHN2 (ENSTGUG00000026687) #9 TRIL (ENSTGUG00000025309) CREB5 (ENSTGUG00000002959) #11 ENSTGUG00000002953 TAX1BP1 (ENSTGUG00000002932) #13 HIBADH (ENSTGUG00000002930) #14 EVX1 (ENSTGUG00000002928) #15 ENSTGUG00000002927 HOXA11 (ENSTGUG00000002925) #17 HOXA10 (ENSTGUG00000002924) #18 ENSTGUG00000002921 HOXA7 (ENSTGUG00000002917) #20 HOXA5 (ENSTGUG00000002906) #22 HOXA6 (ENSTGUG00000002913) #21 HOXA4 (ENSTGUG00000002905) #23 HOXA2 (ENSTGUG00000002902) #25 HOXA1 (ENSTGUG00000021639) #26 SKAP2 (ENSTGUG00000002889) #28 SNX10 (ENSTGUG00000002886) #29 CBX3 (ENSTGUG00000022671) #30 HNRNPA2B1 (ENSTGUG00000002869) #31 NFE2L3 (ENSTGUG00000029756) #32 NPVF (ENSTGUG00000002868) #33 OSBPL3 (ENSTGUG00000002830) #36 GSDME (ENSTGUG00000002821) #37 PALS2 (ENSTGUG00000002811) NPY (ENSTGUG00000027048) FAM221A (ENSTGUG00000002806) Medium ground finch MODERN SPECIES 36 SCRN1 (ENSGFOG00000009219) #7 CHN2 (ENSGFOG00000009230) #9 ENSGFOG00000009247 CREB5 (ENSGFOG00000009281) #11 JAZF1 (ENSGFOG00000009394) #12 TAX1BP1 (ENSGFOG00000009405) #13 HIBADH (ENSGFOG00000009445) #14 ENSGFOG00000009454 EVX1 (ENSGFOG00000009462) #15 HOXA11 (ENSGFOG00000009470) #17 ENSGFOG00000009475 #18 ENSGFOG00000009481 ENSGFOG00000009491 HOXA7 (ENSGFOG00000009495) #20 HOXA6 (ENSGFOG00000009499) #21 HOXA5 (ENSGFOG00000009501) #22 HOXA4 (ENSGFOG00000009507) #23 HOXA3 (ENSGFOG00000009514) #24 ENSGFOG00000009518 HOXA1 (ENSGFOG00000009525) #26 SKAP2 (ENSGFOG00000009533) #28 SNX10 (ENSGFOG00000009547) #29 ENSGFOG00000009557 #30 HNRNPA2B1 (ENSGFOG00000009569) #31 NFE2L3 (ENSGFOG00000009589) #32 ENSGFOG00000009592 NPVF (ENSGFOG00000009598) #33 CYCS (ENSGFOG00000009608) #35 OSBPL3 (ENSGFOG00000009632) #36 GSDME (ENSGFOG00000010291) #37 PALS2 (ENSGFOG00000010300) Great tit MODERN SPECIES 11 ENSPMJG00000002419 ENSPMJG00000002395 CHN2 (ENSPMJG00000002367) #9 TRIL (ENSPMJG00000002329) CREB5 (ENSPMJG00000002248) #11 JAZF1 (ENSPMJG00000002239) #12 TAX1BP1 (ENSPMJG00000001572) #13 HIBADH (ENSPMJG00000001562) #14 EVX1 (ENSPMJG00000001519) #15 ENSPMJG00000001510 HOXA11 (ENSPMJG00000001497) #17 HOXA10 (ENSPMJG00000001490) #18 ENSPMJG00000001476 HOXA7 (ENSPMJG00000001474) #20 HOXA6 (ENSPMJG00000001466) #21 HOXA5 (ENSPMJG00000001464) #22 HOXA4 (ENSPMJG00000001457) #23 HOXA3 (ENSPMJG00000001452) #24 ENSPMJG00000001449 SKAP2 (ENSPMJG00000001424) #28 ENSPMJG00000001363 SNX10 (ENSPMJG00000001341) #29 CBX3 (ENSPMJG00000001278) #30 HNRNPA2B1 (ENSPMJG00000001241) #31 NFE2L3 (ENSPMJG00000001227) #32 NPVF (ENSPMJG00000001035) #33 CYCS (ENSPMJG00000001005) #35 OSBPL3 (ENSPMJG00000000995) #36 GSDME (ENSPMJG00000000980) #37 PALS2 (ENSPMJG00000000962) NPY (ENSPMJG00000000901) Neognathae_c ANCESTRAL SPECIES 12 ENSGT00940000160267 #8 ENSGT01030000235471 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000162440 #18 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522.f #24 ENSGT00940000162533 #25 ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305.c #30 ENSGT00940000154431 #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Kakapo MODERN SPECIES WIPF3 (ENSSHBG00005001360) #8 ENSSHBG00005001346 CHN2 (ENSSHBG00005001335) #9 ENSSHBG00005001318 #9 TRIL (ENSSHBG00005001311) CREB5 (ENSSHBG00005001299) #11 JAZF1 (ENSSHBG00005001291) #12 TAX1BP1 (ENSSHBG00005001265) #13 HIBADH (ENSSHBG00005000011) #14 EVX1 (ENSSHBG00005008278) #15 ENSSHBG00005008269 HOXA11 (ENSSHBG00005008263) #17 HOXA10 (ENSSHBG00005008247) #18 ENSSHBG00005008236 HOXA7 (ENSSHBG00005008228) #20 HOXA5 (ENSSHBG00005008219) #22 HOXA4 (ENSSHBG00005008209) #23 HOXA3 (ENSSHBG00005008202) #24 ENSSHBG00005008197 HOXA1 (ENSSHBG00005008162) #26 SKAP2 (ENSSHBG00005008089) #28 SNX10 (ENSSHBG00005008053) #29 CBX3 (ENSSHBG00005008027) #30 HNRNPA2B1 (ENSSHBG00005008006) #31 NFE2L3 (ENSSHBG00005007997) #32 NPVF (ENSSHBG00005007977) #33 ENSSHBG00005007969 OSBPL3 (ENSSHBG00005006418) #36 GSDME (ENSSHBG00005006258) #37 PALS2 (ENSSHBG00005006231) NPY (ENSSHBG00005006199) Golden eagle MODERN SPECIES 19 WIPF3 (ENSACCG00020013321) #8 ENSACCG00020013336 CHN2 (ENSACCG00020013356) #9 ENSACCG00020013394 CREB5 (ENSACCG00020013419) #11 JAZF1 (ENSACCG00020013461) #12 TAX1BP1 (ENSACCG00020013544) #13 HIBADH (ENSACCG00020013605) #14 EVX1 (ENSACCG00020013622) #15 ENSACCG00020013635 HOXA11 (ENSACCG00020008165) #17 HOXA10 (ENSACCG00020008172) #18 ENSACCG00020008184 HOXA7 (ENSACCG00020008192) #20 HOXA6 (ENSACCG00020008199) #21 HOXA5 (ENSACCG00020008211) #22 HOXA4 (ENSACCG00020008227) #23 HOXA3 (ENSACCG00020008232) #24 HOXA2 (ENSACCG00020008238) #25 HOXA1 (ENSACCG00020008250) #26 SKAP2 (ENSACCG00020008269) #28 SNX10 (ENSACCG00020008285) #29 CBX3 (ENSACCG00020008292) #30 HNRNPA2B1 (ENSACCG00020008304) #31 NPVF (ENSACCG00020008325) #33 C7orf31 (ENSACCG00020008375) #34 ENSACCG00020008414 OSBPL3 (ENSACCG00020008563) #36 GSDME (ENSACCG00020008677) #37 PALS2 (ENSACCG00020008698) NPY (ENSACCG00020008711) African ostrich MODERN SPECIES 661 SCRN1 (ENSSCUG00000006872) #7 WIPF3 (ENSSCUG00000006876) #8 CHN2 (ENSSCUG00000006879) #9 ENSSCUG00000006886 CREB5 (ENSSCUG00000006888) #11 JAZF1 (ENSSCUG00000006893) #12 TAX1BP1 (ENSSCUG00000006898) #13 HIBADH (ENSSCUG00000006903) #14 EVX1 (ENSSCUG00000006910) #15 HOXA11 (ENSSCUG00000006913) #17 ENSSCUG00000006915 #18 ENSSCUG00000006918 HOXA9 (ENSSCUG00000006924) #19 HOXA7 (ENSSCUG00000006927) #20 HOXA6 (ENSSCUG00000006930) #21 HOXA5 (ENSSCUG00000006934) #22 HOXA4 (ENSSCUG00000006938) #23 HOXA3 (ENSSCUG00000006941) #24 ENSSCUG00000006943 HOXA1 (ENSSCUG00000006948) #26 SKAP2 (ENSSCUG00000006952) #28 SNX10 (ENSSCUG00000006957) #29 CBX3 (ENSSCUG00000006959) #30 HNRNPA2B1 (ENSSCUG00000006963) #31 C7orf31 (ENSSCUG00000006968) #34 CYCS (ENSSCUG00000006971) #35 OSBPL3 (ENSSCUG00000006977) #36 ENSSCUG00000006983 GSDME (ENSSCUG00000006986) #37 PALS2 (ENSSCUG00000006988) STK31 (ENSSCUG00000006990) Anura ANCESTRAL SPECIES 12 ENSGT00940000154534.b.b ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000161585 #21 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00390000017856.a #28 ENSGT00940000156007 #29 ENSGT00940000153305 #30 ENSGT00940000154431.b #31 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00390000015236 #34 ENSGT00940000157883.a.b.e.b ENSGT00940000155957 #36 ENSGT00940000155880 #37 ENSGT00940000158500 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000009632 ENSLLEG00000009612 ENSLLEG00000009572 #11 JAZF1 (ENSLLEG00000009536) #12 ENSLLEG00000009342 #13 HIBADH (ENSLLEG00000009078) #14 EVX1 (ENSLLEG00000009012) #15 ENSLLEG00000008964 ENSLLEG00000008907 HOXA11 (ENSLLEG00000008872) #17 ENSLLEG00000008821 ENSLLEG00000008787 ENSLLEG00000008773 HOXA7 (ENSLLEG00000008742) #20 HOXA6 (ENSLLEG00000008707) #21 HOXA5 (ENSLLEG00000008676) #22 HOXA4 (ENSLLEG00000008646) #23 HOXA3 (ENSLLEG00000008614) #24 ENSLLEG00000008599 HOXA1 (ENSLLEG00000008580) #26 SKAP2 (ENSLLEG00000008266) #28 SNX10 (ENSLLEG00000008176) #29 ENSLLEG00000008077 #30 ENSLLEG00000008053 ENSLLEG00000007327 #31 NFE2L3 (ENSLLEG00000007191) #32 ENSLLEG00000007168 NPVF (ENSLLEG00000007148) #33 C7orf31 (ENSLLEG00000007054) #34 ENSLLEG00000007011 ENSLLEG00000006989 Coelacanth MODERN SPECIES 372 EVX1 (ENSLACG00000017535) #15 ENSLACG00000017442 hoxa13b (ENSLACG00000017423) HOXA10 (ENSLACG00000017380) #18 hoxa9a (ENSLACG00000017369) HOXA6 (ENSLACG00000017339) #21 HOXA5 (ENSLACG00000017330) #22 HOXA4 (ENSLACG00000017299) #23 HOXA3 (ENSLACG00000017247) #24 hoxa2b (ENSLACG00000017242) HOXA1 (ENSLACG00000017232) #26 ENSLACG00000017077 ENSLACG00000017044 SKAP2 (ENSLACG00000016050) #28 ENSLACG00000015520 SNX10 (ENSLACG00000014654) #29 CBX3 (ENSLACG00000014131) #30 HNRNPA2B1 (ENSLACG00000013590) #31 NFE2L3 (ENSLACG00000013393) #32 ENSLACG00000010967 ENSLACG00000003254 Actinopterygii ANCESTRAL SPECIES 2 ENSGT00940000157288 ENSGT01000000221212 ENSGT00940000157858 ENSGT00390000013474.b.b #7 ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00940000171365 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000164283.a ENSGT00940000156458 ENSGT00950000183025.b.b ##13 ENSGT00940000161087 ENSGT00940000161307 ENSGT00940000160009 ENSGT00940000160855 ENSGT00940000160866 ENSGT00940000161194 ENSGT00940000159254 ENSGT00940000161023 ENSGT00940000160794 ENSGT00940000159522 #24 ENSGT00940000158988.a.a #23 ENSGT00390000004897 Neopterygii ANCESTRAL SPECIES 7 ENSGT01030000234635.a.b.a.a #9 ENSGT00940000178886 ENSGT00940000159498 #10 ENSGT00940000161975 ENSGT00940000156420 #11 ENSGT00390000003635 #12 ENSGT00950000183025.b.a #13 ENSGT00940000155255 #14 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071 ENSGT00940000158311 #17 ENSGT00940000163268 ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000164283.b.b ENSGT00940000156458 ENSGT00950000183025.b.b ##13 ENSGT00940000161087 ENSGT00940000161307 ENSGT00940000160009 ENSGT00940000160855 ENSGT00940000160866 ENSGT00940000161194 ENSGT00940000159254 ENSGT00940000161023 ENSGT00940000160794 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 Osteoglossocephalai ANCESTRAL SPECIES 37 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000164628 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT01030000234992 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b Clupeocephala ANCESTRAL SPECIES 190 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000166648 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00940000160808 Euteleosteomorpha ANCESTRAL SPECIES 47 ENSGT00940000156475.f ENSGT00940000155348.A ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 Acanthomorphata ANCESTRAL SPECIES 49 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00940000156869 ENSGT00390000008096.C.b Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00940000156869 ENSGT00940000180587 Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x Tiger tail seahorse MODERN SPECIES 99 polr2k (ENSHCOG00000016287) spag1a (ENSHCOG00000016309) ENSHCOG00000016329 #37 osbpl3a (ENSHCOG00000016386) #36 TRIL (ENSHCOG00000016402) ENSHCOG00000016476 ENSHCOG00000016502 jazf1a (ENSHCOG00000016517) #12 tax1bp1a (ENSHCOG00000016543) #13 hibadha (ENSHCOG00000016567) evx1 (ENSHCOG00000016584) #15 hoxa13a (ENSHCOG00000016646) hoxa11a (ENSHCOG00000016652) #17 hoxa10b (ENSHCOG00000016663) ENSHCOG00000016667 hoxa5a (ENSHCOG00000000757) #22 HOXA4 (ENSHCOG00000016701) #23 hoxa3a (ENSHCOG00000016709) #24 ENSHCOG00000016712 hoxa1a (ENSHCOG00000016729) #26 Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157883.a.b.f.pb.b ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x Mangrove rivulus MODERN SPECIES 2 rims3 (ENSKMAG00000018578) nup42 (ENSKMAG00000018611) ENSKMAG00000018632 #37 osbpl3a (ENSKMAG00000018663) #36 TRIL (ENSKMAG00000018754) ENSKMAG00000018769 jazf1a (ENSKMAG00000018788) #12 tax1bp1a (ENSKMAG00000018833) #13 hibadha (ENSKMAG00000018892) evx1 (ENSKMAG00000018913) #15 hoxa13a (ENSKMAG00000018947) hoxa11a (ENSKMAG00000018955) #17 hoxa10b (ENSKMAG00000018961) ENSKMAG00000018970 HOXA7 (ENSKMAG00000018979) #20 hoxa5a (ENSKMAG00000018990) #22 HOXA4 (ENSKMAG00000019005) #23 hoxa3a (ENSKMAG00000019016) #24 ENSKMAG00000019031 hoxa1a (ENSKMAG00000019048) #26 snx10a (ENSKMAG00000019100) #29 cbx3a (ENSKMAG00000019244) #30 nfe2l3 (ENSKMAG00000019254) #32 ENSKMAG00000019264 #33 ENSKMAG00000019288 COLQ (ENSKMAG00000019299) FKBP14 (ENSKMAG00000019327) ENSKMAG00000019351 #8 ENSKMAG00000019364 oxnad1 (ENSKMAG00000019375) ENSKMAG00000019406 Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015006081 ENSNFUG00015006076 #37 OSBPL3A (ENSNFUG00015005984) #36 TRIL (ENSNFUG00015005963) ENSNFUG00015005960 ENSNFUG00015005958 jazf1a (ENSNFUG00015005952) #12 tax1bp1a (ENSNFUG00015005921) #13 HIBADHA (ENSNFUG00015005906) evx1 (ENSNFUG00015005899) #15 hoxa13a (ENSNFUG00015005897) hoxa11a (ENSNFUG00015005895) #17 hoxa10b (ENSNFUG00015005892) ENSNFUG00015005887 HOXA7 (ENSNFUG00015005885) #20 HOXA5A (ENSNFUG00015005877) #22 HOXA4 (ENSNFUG00015005870) #23 hoxa3a (ENSNFUG00015005867) #24 ENSNFUG00015005862 hoxa1a (ENSNFUG00015005861) #26 snx10a (ENSNFUG00015005838) #29 CBX3A (ENSNFUG00015005822) #30 NFE2L3 (ENSNFUG00015005812) #32 ENSNFUG00015005804 #33 COLQ (ENSNFUG00015005797) FKBP14 (ENSNFUG00015005790) ENSNFUG00015005782 #8 ENSNFUG00015005779 oxnad1 (ENSNFUG00015005772) ENSNFUG00015005769 dazl (ENSNFUG00015005767) Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157883.a.b.f.pb.b ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157248.c.b ENSGT00940000162818.c.b.e.a.a ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 Poeciliinae ANCESTRAL SPECIES 18 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157883.a.b.f.pb.b ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157248.c.b ENSGT00940000162818.c.b.e.a.a ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 Poecilia ANCESTRAL SPECIES 24 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157883.a.b.f.pb.b ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157248.c.b ENSGT00940000162818.c.b.e.a.a ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 NAME_6 ANCESTRAL SPECIES 131 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157883.a.b.f.pb.b ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157248.c.b ENSGT00940000162818.c.b.e.a.a ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 Sailfin molly MODERN SPECIES 141 rims3 (ENSPLAG00000022389) nup42 (ENSPLAG00000022371) ENSPLAG00000022362 #37 osbpl3a (ENSPLAG00000022345) #36 TRIL (ENSPLAG00000022255) ENSPLAG00000022243 jazf1a (ENSPLAG00000022239) #12 tax1bp1a (ENSPLAG00000022213) #13 hibadha (ENSPLAG00000022107) evx1 (ENSPLAG00000022075) #15 hoxa13a (ENSPLAG00000022061) hoxa11a (ENSPLAG00000022048) #17 ENSPLAG00000022003 ENSPLAG00000021989 HOXA7 (ENSPLAG00000021952) #20 hoxa5a (ENSPLAG00000021936) #22 HOXA4 (ENSPLAG00000021895) #23 hoxa3a (ENSPLAG00000021890) #24 ENSPLAG00000021887 hoxa1a (ENSPLAG00000021884) #26 snx10a (ENSPLAG00000021857) #29 cbx3a (ENSPLAG00000021841) #30 nfe2l3 (ENSPLAG00000021833) #32 ENSPLAG00000021827 #33 ENSPLAG00000021808 ENSPLAG00000021801 ENSPLAG00000021790 FKBP14 (ENSPLAG00000021776) ENSPLAG00000021767 #8 ENSPLAG00000021739 oxnad1 (ENSPLAG00000021734) Amazon molly MODERN SPECIES 389 rims3 (ENSPFOG00000001562) nup42 (ENSPFOG00000001612) ENSPFOG00000001659 #37 osbpl3a (ENSPFOG00000001768) #36 TRIL (ENSPFOG00000020428) ENSPFOG00000002064 jazf1a (ENSPFOG00000002162) #12 tax1bp1a (ENSPFOG00000002209) #13 hibadha (ENSPFOG00000002325) evx1 (ENSPFOG00000002469) #15 hoxa13a (ENSPFOG00000002494) hoxa11a (ENSPFOG00000024708) #17 hoxa10b (ENSPFOG00000002523) ENSPFOG00000002585 HOXA7 (ENSPFOG00000002599) #20 hoxa5a (ENSPFOG00000002629) #22 HOXA4 (ENSPFOG00000021687) #23 hoxa3a (ENSPFOG00000002649) #24 ENSPFOG00000022132 hoxa1a (ENSPFOG00000002670) #26 snx10a (ENSPFOG00000002685) #29 cbx3a (ENSPFOG00000002688) #30 nfe2l3 (ENSPFOG00000002719) #32 ENSPFOG00000002750 #33 ENSPFOG00000002759 ENSPFOG00000002764 ENSPFOG00000002807 ENSPFOG00000002970 FKBP14 (ENSPFOG00000003022) ENSPFOG00000002982 #8 ENSPFOG00000020429 Guppy MODERN SPECIES 441 ENSPREG00000021452 rims3 (ENSPREG00000021462) nup42 (ENSPREG00000021471) ENSPREG00000021480 #37 osbpl3a (ENSPREG00000021509) #36 TRIL (ENSPREG00000021545) ENSPREG00000021553 jazf1a (ENSPREG00000021580) #12 tax1bp1a (ENSPREG00000021617) #13 hibadha (ENSPREG00000021657) evx1 (ENSPREG00000021672) #15 hoxa13a (ENSPREG00000021694) hoxa11a (ENSPREG00000021710) #17 hoxa10b (ENSPREG00000021717) ENSPREG00000021719 hoxa5a (ENSPREG00000021725) #22 HOXA4 (ENSPREG00000000563) #23 hoxa3a (ENSPREG00000000557) #24 ENSPREG00000000568 hoxa1a (ENSPREG00000000658) #26 snx10a (ENSPREG00000000706) #29 cbx3a (ENSPREG00000000774) #30 nfe2l3 (ENSPREG00000000792) #32 ENSPREG00000000800 #33 ENSPREG00000000816 ENSPREG00000000998 ENSPREG00000001010 ENSPREG00000001059 ENSPREG00000001089 #8 FKBP14 (ENSPREG00000001161) ENSPREG00000001172 Platyfish MODERN SPECIES 4 rims3 (ENSXMAG00000010647) nup42 (ENSXMAG00000010651) ENSXMAG00000010652 #37 osbpl3a (ENSXMAG00000001083) #36 ENSXMAG00000020864 ENSXMAG00000001066 jazf1a (ENSXMAG00000025678) #12 tax1bp1a (ENSXMAG00000010881) #13 hibadha (ENSXMAG00000027716) evx1 (ENSXMAG00000028620) #15 hoxa13a (ENSXMAG00000001062) hoxa11a (ENSXMAG00000027852) #17 hoxa10b (ENSXMAG00000029054) ENSXMAG00000001057 HOXA7 (ENSXMAG00000026689) #20 hoxa5a (ENSXMAG00000001054) #22 HOXA4 (ENSXMAG00000023150) #23 hoxa3a (ENSXMAG00000028550) #24 ENSXMAG00000001041 hoxa1a (ENSXMAG00000001039) #26 snx10a (ENSXMAG00000001035) #29 cbx3a (ENSXMAG00000001027) #30 nfe2l3 (ENSXMAG00000021020) #32 ENSXMAG00000001014 #33 ENSXMAG00000026168 ENSXMAG00000025378 ENSXMAG00000020144 FKBP14 (ENSXMAG00000026229) ENSXMAG00000000986 #8 ENSXMAG00000020143 oxnad1 (ENSXMAG00000000980) NAME_4 ANCESTRAL SPECIES 107 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157883.a.b.f.pb.b ENSGT00940000157883.a.b.f.pb.a ENSGT00940000157248.c.b ENSGT00940000162818.c.b.e.a.a ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 Mummichog MODERN SPECIES 2329 rims3 (ENSFHEG00000013684) nup42 (ENSFHEG00000013692) ENSFHEG00000013700 #37 osbpl3a (ENSFHEG00000013709) #36 TRIL (ENSFHEG00000013715) ENSFHEG00000013720 jazf1a (ENSFHEG00000013733) #12 tax1bp1a (ENSFHEG00000013748) #13 hibadha (ENSFHEG00000013773) evx1 (ENSFHEG00000013781) #15 hoxa13a (ENSFHEG00000013789) hoxa11a (ENSFHEG00000013797) #17 hoxa10b (ENSFHEG00000013805) ENSFHEG00000013809 HOXA7 (ENSFHEG00000013819) #20 hoxa5a (ENSFHEG00000013822) #22 HOXA4 (ENSFHEG00000013828) #23 hoxa3a (ENSFHEG00000013849) #24 ENSFHEG00000013857 hoxa1a (ENSFHEG00000013905) #26 snx10a (ENSFHEG00000014090) #29 cbx3a (ENSFHEG00000014100) #30 nfe2l3 (ENSFHEG00000014108) #32 NPVF (ENSFHEG00000014120) #33 ENSFHEG00000014122 ENSFHEG00000014131 COLQ (ENSFHEG00000014155) FKBP14 (ENSFHEG00000014170) ENSFHEG00000014181 #8 ENSFHEG00000014192 oxnad1 (ENSFHEG00000014203) Sheepshead minnow MODERN SPECIES 210 rims3 (ENSCVAG00000010314) ENSCVAG00000010294 ENSCVAG00000010274 #37 osbpl3a (ENSCVAG00000010263) #36 ENSCVAG00000010188 ENSCVAG00000010172 jazf1a (ENSCVAG00000010159) #12 tax1bp1a (ENSCVAG00000000881) #13 hibadha (ENSCVAG00000010129) evx1 (ENSCVAG00000010081) #15 hoxa13a (ENSCVAG00000010073) hoxa11a (ENSCVAG00000010064) #17 hoxa10b (ENSCVAG00000010058) ENSCVAG00000010053 HOXA7 (ENSCVAG00000010047) #20 hoxa5a (ENSCVAG00000010032) #22 hoxa3a (ENSCVAG00000010027) #24 HOXA4 (ENSCVAG00000010012) #23 ENSCVAG00000010007 hoxa1a (ENSCVAG00000009993) #26 snx10a (ENSCVAG00000009971) #29 cbx3a (ENSCVAG00000009811) #30 nfe2l3 (ENSCVAG00000009783) #32 npvf (ENSCVAG00000009777) #33 ENSCVAG00000009771 COLQ (ENSCVAG00000009761) ENSCVAG00000009691 FKBP14 (ENSCVAG00000009636) ENSCVAG00000009629 #8 ENSCVAG00000009624 oxnad1 (ENSCVAG00000009610) Oryzias ANCESTRAL SPECIES 22 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x.f ENSGT00530000063480.b Oryzias_b ANCESTRAL SPECIES 22 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x.f ENSGT00530000063480.b Indian medaka MODERN SPECIES 3 rims3 (ENSOMEG00000019104) nup42 (ENSOMEG00000019078) ENSOMEG00000019056 #37 osbpl3a (ENSOMEG00000019036) #36 TRIL (ENSOMEG00000018990) ENSOMEG00000018974 jazf1a (ENSOMEG00000018946) #12 tax1bp1a (ENSOMEG00000018894) #13 hibadha (ENSOMEG00000018845) evx1 (ENSOMEG00000018828) #15 hoxa13a (ENSOMEG00000018800) hoxa11a (ENSOMEG00000018787) #17 hoxa10b (ENSOMEG00000000716) ENSOMEG00000018763 HOXA7 (ENSOMEG00000018749) #20 hoxa5a (ENSOMEG00000018736) #22 hoxa3a (ENSOMEG00000018727) #24 HOXA4 (ENSOMEG00000018715) #23 ENSOMEG00000000777 hoxa1a (ENSOMEG00000018694) #26 snx10a (ENSOMEG00000018674) #29 cbx3a (ENSOMEG00000018650) #30 nfe2l3 (ENSOMEG00000018610) #32 ENSOMEG00000018577 #33 ENSOMEG00000018555 FKBP14 (ENSOMEG00000018518) ENSOMEG00000018495 #8 ENSOMEG00000018478 oxnad1 (ENSOMEG00000018467) RFTN1 (ENSOMEG00000018428) dazl (ENSOMEG00000018395) Javanese ricefish MODERN SPECIES 2 rims3 (ENSOJAG00000003209) nup42 (ENSOJAG00000003218) ENSOJAG00000003225 #37 osbpl3a (ENSOJAG00000003244) #36 TRIL (ENSOJAG00000003583) ENSOJAG00000003593 jazf1a (ENSOJAG00000003619) #12 tax1bp1a (ENSOJAG00000003658) #13 hibadha (ENSOJAG00000003690) evx1 (ENSOJAG00000003773) #15 hoxa13a (ENSOJAG00000003786) hoxa11a (ENSOJAG00000003810) #17 hoxa10b (ENSOJAG00000003838) ENSOJAG00000003848 HOXA7 (ENSOJAG00000003886) #20 hoxa5a (ENSOJAG00000003979) #22 HOXA4 (ENSOJAG00000004001) #23 hoxa3a (ENSOJAG00000004029) #24 ENSOJAG00000004052 hoxa1a (ENSOJAG00000004073) #26 snx10a (ENSOJAG00000004089) #29 cbx3a (ENSOJAG00000004172) #30 nfe2l3 (ENSOJAG00000004247) #32 ENSOJAG00000004264 #33 ENSOJAG00000004275 FKBP14 (ENSOJAG00000004301) ENSOJAG00000004313 oxnad1 (ENSOJAG00000004338) ENSOJAG00000004347 ENSOJAG00000004362 dazl (ENSOJAG00000004441) Oryzias_a ANCESTRAL SPECIES 30 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x.f ENSGT00530000063480.b Chinese medaka MODERN SPECIES 1110 ENSOSIG00000008709 rims3 (ENSOSIG00000008710) nup42 (ENSOSIG00000008711) osbpl3a (ENSOSIG00000008712) #36 TRIL (ENSOSIG00000010071) ENSOSIG00000010072 jazf1a (ENSOSIG00000010073) #12 tax1bp1a (ENSOSIG00000010075) #13 hibadha (ENSOSIG00000010076) evx1 (ENSOSIG00000010128) #15 hoxa13a (ENSOSIG00000010129) hoxa11a (ENSOSIG00000010131) #17 hoxa10b (ENSOSIG00000010133) ENSOSIG00000010135 HOXA7 (ENSOSIG00000010138) #20 hoxa5a (ENSOSIG00000010140) #22 HOXA4 (ENSOSIG00000010142) #23 hoxa3a (ENSOSIG00000010145) #24 hoxa1a (ENSOSIG00000010147) #26 snx10a (ENSOSIG00000010148) #29 cbx3a (ENSOSIG00000010157) #30 nfe2l3 (ENSOSIG00000010197) #32 ENSOSIG00000010198 FKBP14 (ENSOSIG00000010199) ENSOSIG00000010200 #8 ENSOSIG00000010214 oxnad1 (ENSOSIG00000010218) ENSOSIG00000010221 ENSOSIG00000010223 ENSOSIG00000010245 tbc1d5 (ENSOSIG00000010737) Japanese Medaka HdrR MODERN SPECIES 2 nup42 (ENSORLG00000027168) ENSORLG00000005186 #37 osbpl3a (ENSORLG00000005177) #36 TRIL (ENSORLG00000005131) ENSORLG00000005125 jazf1a (ENSORLG00000005107) #12 ENSORLG00000023632 tax1bp1a (ENSORLG00000005098) #13 hibadha (ENSORLG00000005067) evx1 (ENSORLG00000005050) #15 hoxa13a (ENSORLG00000005043) hoxa11a (ENSORLG00000005037) #17 ENSORLG00000005034 hoxa9a (ENSORLG00000027463) HOXA7 (ENSORLG00000023188) #20 hoxa5a (ENSORLG00000026145) #22 HOXA4 (ENSORLG00000005025) #23 hoxa3a (ENSORLG00000027867) #24 ENSORLG00000004987 hoxa1a (ENSORLG00000004981) #26 snx10a (ENSORLG00000026166) #29 cbx3a (ENSORLG00000029462) #30 nfe2l3 (ENSORLG00000004962) #32 ENSORLG00000025295 #33 ENSORLG00000004944 FKBP14 (ENSORLG00000004912) ENSORLG00000025388 #8 ENSORLG00000004907 oxnad1 (ENSORLG00000004904) RFTN1 (ENSORLG00000004886) dazl (ENSORLG00000004848) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Pomacentridae ANCESTRAL SPECIES 7 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Bicolor damselfish MODERN SPECIES 1727 tax1bp1a (ENSSPAG00000023369) #13 hibadha (ENSSPAG00000000072) evx1 (ENSSPAG00000000089) #15 hoxa13a (ENSSPAG00000000108) hoxa11a (ENSSPAG00000000114) #17 hoxa10b (ENSSPAG00000000124) ENSSPAG00000000136 HOXA7 (ENSSPAG00000000170) #20 hoxa5a (ENSSPAG00000000186) #22 HOXA4 (ENSSPAG00000000194) #23 hoxa3a (ENSSPAG00000000203) #24 ENSSPAG00000000207 hoxa1a (ENSSPAG00000000269) #26 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Spiny chromis MODERN SPECIES 10 rims3 (ENSAPOG00000020491) nup42 (ENSAPOG00000020514) ENSAPOG00000020527 #37 osbpl3a (ENSAPOG00000020643) #36 TRIL (ENSAPOG00000020703) ENSAPOG00000020725 JAZF1 (ENSAPOG00000020760) #12 tax1bp1a (ENSAPOG00000020841) #13 hibadha (ENSAPOG00000020887) evx1 (ENSAPOG00000000596) #15 hoxa13a (ENSAPOG00000021038) hoxa11a (ENSAPOG00000021108) #17 hoxa10b (ENSAPOG00000021132) ENSAPOG00000021169 HOXA7 (ENSAPOG00000021207) #20 hoxa5a (ENSAPOG00000021214) #22 HOXA4 (ENSAPOG00000021221) #23 hoxa3a (ENSAPOG00000021239) #24 ENSAPOG00000021248 hoxa1a (ENSAPOG00000021294) #26 Amphiprion ANCESTRAL SPECIES 16 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Orange clownfish MODERN SPECIES 8 nup42 (ENSAPEG00000020008) ENSAPEG00000019986 #37 osbpl3a (ENSAPEG00000019934) #36 TRIL (ENSAPEG00000019911) ENSAPEG00000019901 ENSAPEG00000019890 jazf1a (ENSAPEG00000019873) #12 tax1bp1a (ENSAPEG00000019804) #13 hibadha (ENSAPEG00000019757) evx1 (ENSAPEG00000019743) #15 hoxa13a (ENSAPEG00000019685) hoxa11a (ENSAPEG00000019676) #17 hoxa10b (ENSAPEG00000019646) ENSAPEG00000019634 HOXA7 (ENSAPEG00000019614) #20 hoxa5a (ENSAPEG00000019578) #22 HOXA4 (ENSAPEG00000019567) #23 hoxa3a (ENSAPEG00000019555) #24 ENSAPEG00000019539 hoxa1a (ENSAPEG00000019509) #26 snx10a (ENSAPEG00000019361) #29 cbx3a (ENSAPEG00000019335) #30 nfe2l3 (ENSAPEG00000019329) #32 ENSAPEG00000019310 ENSAPEG00000019301 COLQ (ENSAPEG00000019258) FKBP14 (ENSAPEG00000019236) ENSAPEG00000019216 #8 ENSAPEG00000019182 oxnad1 (ENSAPEG00000019163) ENSAPEG00000019149 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 1052 rims3 (ENSAOCG00000021180) nup42 (ENSAOCG00000021141) ENSAOCG00000021132 #37 osbpl3a (ENSAOCG00000021114) #36 TRIL (ENSAOCG00000021002) ENSAOCG00000020977 jazf1a (ENSAOCG00000002494) #12 tax1bp1a (ENSAOCG00000020906) #13 hibadha (ENSAOCG00000020824) hoxa10b (ENSAOCG00000001942) evx1 (ENSAOCG00000020769) #15 hoxa13a (ENSAOCG00000020728) hoxa11a (ENSAOCG00000020636) #17 ENSAOCG00000020575 HOXA7 (ENSAOCG00000020541) #20 hoxa5a (ENSAOCG00000020522) #22 HOXA4 (ENSAOCG00000020516) #23 hoxa3a (ENSAOCG00000020502) #24 ENSAOCG00000020489 hoxa1a (ENSAOCG00000020470) #26 Clown anemonefish MODERN SPECIES 2054 rbms2b (ENSAOCG00000024245) ENSAOCG00000024226 FAIM2 (ENSAOCG00000024211) mfsd5 (ENSAOCG00000024195) nr1d4a (ENSAOCG00000024186) RARG (ENSAOCG00000024160) calcoco1a (ENSAOCG00000024126) ##13 hoxc13a (ENSAOCG00000024112) hoxc12a (ENSAOCG00000024079) hoxc11a (ENSAOCG00000024076) hoxc10a (ENSAOCG00000024068) hoxc9a (ENSAOCG00000024057) hoxc8a (ENSAOCG00000024046) hoxc6a (ENSAOCG00000024014) ENSAOCG00000024007 #22 hoxc4a (ENSAOCG00000023973) Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00960000188241 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00960000188241 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Eastern happy MODERN SPECIES 13 rims3 (ENSACLG00000001737) nup42 (ENSACLG00000001722) ENSACLG00000001705 #37 osbpl3a (ENSACLG00000001532) #36 TRIL (ENSACLG00000001487) ENSACLG00000001476 jazf1a (ENSACLG00000001447) #12 tax1bp1a (ENSACLG00000001428) #13 hibadha (ENSACLG00000001395) evx1 (ENSACLG00000001390) #15 hoxa13a (ENSACLG00000001370) hoxa11a (ENSACLG00000001279) #17 hoxa10b (ENSACLG00000001266) ENSACLG00000001248 HOXA7 (ENSACLG00000001195) #20 hoxa5a (ENSACLG00000001190) #22 HOXA4 (ENSACLG00000001184) #23 hoxa3a (ENSACLG00000001177) #24 ENSACLG00000001166 hoxa1a (ENSACLG00000001107) #26 SNX10 (ENSACLG00000000984) #29 cbx3a (ENSACLG00000000964) #30 snx10a (ENSACLG00000000942) #29 cbx3a (ENSACLG00000000888) #30 nfe2l3 (ENSACLG00000000873) #32 ENSACLG00000000868 #33 ENSACLG00000000794 COLQ (ENSACLG00000000784) FKBP14 (ENSACLG00000000687) ENSACLG00000000637 #8 ENSACLG00000000633 Zebra mbuna MODERN SPECIES 1104 rims3 (ENSMZEG00005010454) nup42 (ENSMZEG00005010447) ENSMZEG00005010434 #37 osbpl3a (ENSMZEG00005010389) #36 TRIL (ENSMZEG00005010370) ENSMZEG00005010360 jazf1a (ENSMZEG00005010334) #12 tax1bp1a (ENSMZEG00005010312) #13 hibadha (ENSMZEG00005010300) evx1 (ENSMZEG00005010281) #15 hoxa13a (ENSMZEG00005010249) hoxa11a (ENSMZEG00005010243) #17 hoxa10b (ENSMZEG00005010234) ENSMZEG00005010211 HOXA7 (ENSMZEG00005010189) #20 hoxa5a (ENSMZEG00005010174) #22 HOXA4 (ENSMZEG00005010169) #23 hoxa3a (ENSMZEG00005010153) #24 ENSMZEG00005010136 hoxa1a (ENSMZEG00005010106) #26 snx10a (ENSMZEG00005010098) #29 cbx3a (ENSMZEG00005010086) #30 nfe2l3 (ENSMZEG00005010077) #32 ENSMZEG00005010069 #33 ENSMZEG00005009664 ENSMZEG00005009648 FKBP14 (ENSMZEG00005009610) ENSMZEG00005009600 #8 ENSMZEG00005009592 oxnad1 (ENSMZEG00005009577) ENSMZEG00005009549 P. nyererei MODERN SPECIES 325 rims3 (ENSPNYG00000021062) nup42 (ENSPNYG00000021054) ENSPNYG00000021034 #37 osbpl3a (ENSPNYG00000021001) #36 TRIL (ENSPNYG00000020984) ENSPNYG00000020970 jazf1a (ENSPNYG00000020954) #12 tax1bp1a (ENSPNYG00000020912) #13 hibadha (ENSPNYG00000020895) evx1 (ENSPNYG00000020879) #15 hoxa13a (ENSPNYG00000020872) hoxa11a (ENSPNYG00000020865) #17 hoxa10b (ENSPNYG00000020854) ENSPNYG00000020845 HOXA7 (ENSPNYG00000020831) #20 hoxa5a (ENSPNYG00000020824) #22 HOXA4 (ENSPNYG00000020799) #23 hoxa3a (ENSPNYG00000020795) #24 ENSPNYG00000020762 hoxa1a (ENSPNYG00000020732) #26 snx10a (ENSPNYG00000020679) #29 cbx3a (ENSPNYG00000020660) #30 nfe2l3 (ENSPNYG00000020654) #32 ENSPNYG00000020637 #33 ENSPNYG00000020598 FKBP14 (ENSPNYG00000020583) ENSPNYG00000020546 #8 ENSPNYG00000020536 oxnad1 (ENSPNYG00000020517) ENSPNYG00000020505 dazl (ENSPNYG00000020484) Burton s mouthbrooder MODERN SPECIES 367 nup42 (ENSHBUG00000016399) ENSHBUG00000016420 #37 osbpl3a (ENSHBUG00000016525) #36 TRIL (ENSHBUG00000016567) ENSHBUG00000000487 jazf1a (ENSHBUG00000016620) #12 tax1bp1a (ENSHBUG00000016633) #13 hibadha (ENSHBUG00000016662) evx1 (ENSHBUG00000016678) #15 hoxa13a (ENSHBUG00000016694) hoxa11a (ENSHBUG00000016706) #17 hoxa10b (ENSHBUG00000016715) ENSHBUG00000016721 HOXA7 (ENSHBUG00000016753) #20 hoxa5a (ENSHBUG00000016757) #22 HOXA4 (ENSHBUG00000016766) #23 hoxa3a (ENSHBUG00000016774) #24 ENSHBUG00000016786 hoxa1a (ENSHBUG00000016813) #26 snx10a (ENSHBUG00000017009) #29 cbx3a (ENSHBUG00000017035) #30 nfe2l3 (ENSHBUG00000017043) #32 ENSHBUG00000017056 #33 ENSHBUG00000000517 ENSHBUG00000017296 FKBP14 (ENSHBUG00000017312) ENSHBUG00000017327 #8 oxnad1 (ENSHBUG00000017361) ENSHBUG00000017374 dazl (ENSHBUG00000017426) Lyretail cichlid MODERN SPECIES 302 nup42 (ENSNBRG00000004424) ENSNBRG00000004442 #37 osbpl3a (ENSNBRG00000004455) #36 ENSNBRG00000004507 ENSNBRG00000004534 jazf1a (ENSNBRG00000004558) #12 jazf1a (ENSNBRG00000004573) #12 tax1bp1a (ENSNBRG00000004586) #13 hibadha (ENSNBRG00000004647) evx1 (ENSNBRG00000004662) #15 hoxa13a (ENSNBRG00000004706) hoxa11a (ENSNBRG00000004716) #17 hoxa10b (ENSNBRG00000004742) ENSNBRG00000004756 HOXA7 (ENSNBRG00000004775) #20 hoxa5a (ENSNBRG00000004795) #22 HOXA4 (ENSNBRG00000004812) #23 hoxa3a (ENSNBRG00000004849) #24 ENSNBRG00000004855 hoxa1a (ENSNBRG00000004915) #26 snx10a (ENSNBRG00000004965) #29 cbx3a (ENSNBRG00000005093) #30 nfe2l3 (ENSNBRG00000005122) #32 ENSNBRG00000005134 #33 ENSNBRG00000005171 ENSNBRG00000005295 FKBP14 (ENSNBRG00000005325) FKBP14 (ENSNBRG00000005341) ENSNBRG00000005349 #8 ENSNBRG00000005368 oxnad1 (ENSNBRG00000005394) Nile tilapia MODERN SPECIES 13 ENSONIG00000035265 rims3 (ENSONIG00000004620) nup42 (ENSONIG00000037233) ENSONIG00000004618 #37 osbpl3a (ENSONIG00000004610) #36 ENSONIG00000034494 jazf1a (ENSONIG00000042804) #12 tax1bp1a (ENSONIG00000004605) #13 hibadha (ENSONIG00000004603) evx1 (ENSONIG00000027928) #15 hoxa13 (ENSONIG00000029807) hoxa11a (ENSONIG00000004600) #17 hoxa10b (ENSONIG00000004598) ENSONIG00000004597 HOXA7 (ENSONIG00000004596) #20 hoxa5a (ENSONIG00000004595) #22 HOXA4 (ENSONIG00000004594) #23 hoxa3a (ENSONIG00000004593) #24 ENSONIG00000004592 hoxa1a (ENSONIG00000004591) #26 snx10a (ENSONIG00000004590) #29 cbx3a (ENSONIG00000004588) #30 nfe2l3 (ENSONIG00000004586) #32 ENSONIG00000004585 #33 ENSONIG00000008589 ENSONIG00000004581 FKBP14 (ENSONIG00000004578) ENSONIG00000004576 #8 ENSONIG00000021345 oxnad1 (ENSONIG00000004575) ENSONIG00000004569 Midas cichlid MODERN SPECIES 563 smap2 (ENSACIG00000002678) rims3 (ENSACIG00000002657) nup42 (ENSACIG00000002634) ENSACIG00000002621 #37 osbpl3a (ENSACIG00000002569) #36 TRIL (ENSACIG00000002530) ENSACIG00000002517 jazf1a (ENSACIG00000002498) #12 tax1bp1a (ENSACIG00000002452) #13 hibadha (ENSACIG00000002440) evx1 (ENSACIG00000002431) #15 hoxa13a (ENSACIG00000002418) hoxa11a (ENSACIG00000002384) #17 ENSACIG00000002365 HOXA7 (ENSACIG00000002354) #20 hoxa5a (ENSACIG00000002319) #22 HOXA4 (ENSACIG00000002307) #23 hoxa3a (ENSACIG00000002266) #24 ENSACIG00000002229 hoxa1a (ENSACIG00000002201) #26 snx10a (ENSACIG00000002122) #29 cbx3a (ENSACIG00000002111) #30 nfe2l3 (ENSACIG00000002095) #32 ENSACIG00000002071 #33 ENSACIG00000002046 FKBP14 (ENSACIG00000002030) ENSACIG00000001998 #8 ENSACIG00000001986 oxnad1 (ENSACIG00000001969) ENSACIG00000001960 dazl (ENSACIG00000001931) Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Zig-zag eel MODERN SPECIES 2 ENSMAMG00000007625 ENSMAMG00000007640 #37 ENSMAMG00000007664 #36 TRIL (ENSMAMG00000007728) ENSMAMG00000007742 JAZF1 (ENSMAMG00000027007) #12 tax1bp1a (ENSMAMG00000007765) #13 hibadha (ENSMAMG00000007830) evx1 (ENSMAMG00000007854) #15 ENSMAMG00000007871 hoxa11a (ENSMAMG00000007883) #17 ENSMAMG00000007887 ENSMAMG00000007899 ENSMAMG00000025324 HOXA7 (ENSMAMG00000027947) #20 hoxa5a (ENSMAMG00000025732) #22 HOXA4 (ENSMAMG00000007955) #23 hoxa3a (ENSMAMG00000007941) #24 ENSMAMG00000007958 HOXA1 (ENSMAMG00000007973) #26 snx10a (ENSMAMG00000007992) #29 CBX3 (ENSMAMG00000008011) #30 nfe2l3 (ENSMAMG00000008016) #32 ENSMAMG00000008025 ENSMAMG00000008039 ENSMAMG00000027344 ENSMAMG00000008087 #8 ENSMAMG00000008108 oxnad1 (ENSMAMG00000026716) ENSMAMG00000028333 ENSMAMG00000024330 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Siamese fighting fish MODERN SPECIES 2 trappc3 (ENSBSLG00000009810) smap2 (ENSBSLG00000009858) rims3 (ENSBSLG00000009887) nup42 (ENSBSLG00000009916) ENSBSLG00000009937 #37 osbpl3a (ENSBSLG00000009971) #36 TRIL (ENSBSLG00000010166) jazf1a (ENSBSLG00000010180) #12 tax1bp1a (ENSBSLG00000010674) #13 hibadha (ENSBSLG00000010856) ENSBSLG00000011586 evx1 (ENSBSLG00000011641) #15 hoxa13a (ENSBSLG00000011697) hoxa11a (ENSBSLG00000011737) #17 HOXA7 (ENSBSLG00000011758) #20 hoxa5a (ENSBSLG00000011797) #22 HOXA4 (ENSBSLG00000011815) #23 hoxa3a (ENSBSLG00000011839) #24 ENSBSLG00000011861 hoxa1a (ENSBSLG00000011877) #26 snx10a (ENSBSLG00000011898) #29 cbx3a (ENSBSLG00000011919) #30 nfe2l3 (ENSBSLG00000012036) #32 ENSBSLG00000012060 #33 ENSBSLG00000012090 FKBP14 (ENSBSLG00000012125) ENSBSLG00000012133 #8 ENSBSLG00000012157 oxnad1 (ENSBSLG00000012170) ENSBSLG00000012189 dazl (ENSBSLG00000012205) Climbing perch MODERN SPECIES 2 ENSATEG00000029594 ENSATEG00000002280 ENSATEG00000002228 ENSATEG00000002213 #37 ENSATEG00000002124 #36 TRIL (ENSATEG00000029886) ENSATEG00000002087 JAZF1 (ENSATEG00000002071) #12 tax1bp1a (ENSATEG00000002002) #13 hibadha (ENSATEG00000001998) evx1 (ENSATEG00000001945) #15 ENSATEG00000026862 hoxa11a (ENSATEG00000001926) #17 ENSATEG00000001918 ENSATEG00000001859 hoxa5a (ENSATEG00000001828) #22 HOXA4 (ENSATEG00000028592) #23 HOXA3 (ENSATEG00000001808) #24 ENSATEG00000001763 HOXA1 (ENSATEG00000001717) #26 snx10a (ENSATEG00000001661) #29 CBX3 (ENSATEG00000001629) #30 nfe2l3 (ENSATEG00000001620) #32 ENSATEG00000001574 #33 ENSATEG00000001525 ENSATEG00000001514 ENSATEG00000001464 #8 ENSATEG00000001434 oxnad1 (ENSATEG00000001424) ENSATEG00000001396 ENSATEG00000001386 Carangaria ANCESTRAL SPECIES 14 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab.b #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Seriola ANCESTRAL SPECIES 12 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab.b #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Greater amberjack MODERN SPECIES 48 rims3 (ENSSDUG00000004261) nup42 (ENSSDUG00000004296) ENSSDUG00000004322 #37 osbpl3a (ENSSDUG00000004357) #36 TRIL (ENSSDUG00000004429) ENSSDUG00000004437 jazf1a (ENSSDUG00000004450) #12 tax1bp1a (ENSSDUG00000004489) #13 hibadha (ENSSDUG00000004564) evx1 (ENSSDUG00000004583) #15 hoxa13a (ENSSDUG00000004612) hoxa10b (ENSSDUG00000004658) hoxa11a (ENSSDUG00000004669) #17 ENSSDUG00000004714 HOXA7 (ENSSDUG00000004723) #20 hoxa5a (ENSSDUG00000004737) #22 HOXA4 (ENSSDUG00000004757) #23 hoxa3a (ENSSDUG00000004765) #24 ENSSDUG00000004775 hoxa1a (ENSSDUG00000004791) #26 snx10a (ENSSDUG00000004833) #29 cbx3a (ENSSDUG00000005004) #30 nfe2l3 (ENSSDUG00000005020) #32 ENSSDUG00000005032 #33 ENSSDUG00000005049 ENSSDUG00000005062 FKBP14 (ENSSDUG00000005096) ENSSDUG00000005117 #8 ENSSDUG00000005132 oxnad1 (ENSSDUG00000005142) ENSSDUG00000005158 Yellowtail amberjack MODERN SPECIES 3204 rims3 (ENSSLDG00000006487) nup42 (ENSSLDG00000006438) ENSSLDG00000006408 #37 osbpl3a (ENSSLDG00000006313) #36 ENSSLDG00000006275 ENSSLDG00000006258 jazf1a (ENSSLDG00000006230) #12 tax1bp1a (ENSSLDG00000006207) #13 hibadha (ENSSLDG00000006181) evx1 (ENSSLDG00000006166) #15 hoxa13a (ENSSLDG00000006148) hoxa11a (ENSSLDG00000006095) #17 hoxa10b (ENSSLDG00000006083) ENSSLDG00000006063 HOXA7 (ENSSLDG00000006049) #20 hoxa5a (ENSSLDG00000006039) #22 HOXA4 (ENSSLDG00000006027) #23 hoxa3a (ENSSLDG00000006013) #24 ENSSLDG00000005939 hoxa1a (ENSSLDG00000005844) #26 snx10a (ENSSLDG00000005732) #29 cbx3a (ENSSLDG00000005680) #30 nfe2l3 (ENSSLDG00000005672) #32 ENSSLDG00000005659 #33 ENSSLDG00000005643 COLQ (ENSSLDG00000005618) FKBP14 (ENSSLDG00000005590) ENSSLDG00000005567 #8 ENSSLDG00000005548 oxnad1 (ENSSLDG00000005533) ENSSLDG00000005518 Barramundi perch MODERN SPECIES 3 nup42 (ENSLCAG00010016376) ENSLCAG00010016392 #37 osbpl3a (ENSLCAG00010016439) #36 TRIL (ENSLCAG00010016586) ENSLCAG00010016589 jazf1a (ENSLCAG00010016593) #12 tax1bp1a (ENSLCAG00010016597) #13 ENSLCAG00010016602 #13 hibadha (ENSLCAG00010016611) evx1 (ENSLCAG00010016651) #15 hoxa13a (ENSLCAG00010016654) hoxa11a (ENSLCAG00010016655) #17 hoxa10b (ENSLCAG00010016658) ENSLCAG00010016661 HOXA7 (ENSLCAG00010016662) #20 hoxa5a (ENSLCAG00010016664) #22 HOXA4 (ENSLCAG00010016671) #23 hoxa3a (ENSLCAG00010016667) #24 ENSLCAG00010016673 hoxa1a (ENSLCAG00010016677) #26 snx10a (ENSLCAG00010016683) #29 cbx3a (ENSLCAG00010016686) #30 nfe2l3 (ENSLCAG00010016699) #32 ENSLCAG00010016700 #33 ENSLCAG00010016702 COLQ (ENSLCAG00010016703) FKBP14 (ENSLCAG00010016709) ENSLCAG00010016711 #8 ENSLCAG00010016719 oxnad1 (ENSLCAG00010016722) ENSLCAG00010016725 Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Turbot MODERN SPECIES 14 tac1 (ENSSMAG00000015770) asns (ENSSMAG00000015700) ENSSMAG00000015650 #37 ENSSMAG00000015524 #36 TRIL (ENSSMAG00000015515) ENSSMAG00000015493 jazf1a (ENSSMAG00000015469) #12 tax1bp1a (ENSSMAG00000015345) #13 hibadha (ENSSMAG00000015307) ENSSMAG00000034628 hoxa13a (ENSSMAG00000015259) hoxa11a (ENSSMAG00000015215) #17 ENSSMAG00000015206 ENSSMAG00000015202 HOXA7 (ENSSMAG00000015198) #20 hoxa5a (ENSSMAG00000015188) #22 HOXA4 (ENSSMAG00000021678) #23 HOXA3 (ENSSMAG00000015176) #24 ENSSMAG00000015164 HOXA1 (ENSSMAG00000015134) #26 ENSSMAG00000015127 snx10a (ENSSMAG00000014876) #29 CBX3 (ENSSMAG00000014860) #30 nfe2l3 (ENSSMAG00000014852) #32 ENSSMAG00000014833 ENSSMAG00000014822 ENSSMAG00000014800 ENSSMAG00000014788 ENSSMAG00000014778 #8 ENSSMAG00000014767 oxnad1 (ENSSMAG00000014752) Tongue sole MODERN SPECIES 9 rims3 (ENSCSEG00000014116) nup42 (ENSCSEG00000014125) ENSCSEG00000014132 #37 osbpl3a (ENSCSEG00000014147) #36 TRIL (ENSCSEG00000014180) ENSCSEG00000014203 jazf1a (ENSCSEG00000014225) #12 tax1bp1a (ENSCSEG00000014240) #13 hibadha (ENSCSEG00000014257) evx1 (ENSCSEG00000014267) #15 hoxa13a (ENSCSEG00000014281) hoxa11a (ENSCSEG00000014288) #17 hoxa10b (ENSCSEG00000014301) ENSCSEG00000014310 HOXA7 (ENSCSEG00000014312) #20 hoxa5a (ENSCSEG00000014317) #22 HOXA4 (ENSCSEG00000014321) #23 hoxa3a (ENSCSEG00000014335) #24 ENSCSEG00000014339 hoxa1a (ENSCSEG00000014346) #26 snx10a (ENSCSEG00000014353) #29 nfe2l3 (ENSCSEG00000014383) #32 ENSCSEG00000014403 ENSCSEG00000014427 ENSCSEG00000014447 FKBP14 (ENSCSEG00000014491) ENSCSEG00000014506 #8 ENSCSEG00000014515 oxnad1 (ENSCSEG00000014519) ENSCSEG00000014523 dazl (ENSCSEG00000014529) Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Ballan wrasse MODERN SPECIES 172 rims3 (ENSLBEG00000002336) nup42 (ENSLBEG00000002319) ENSLBEG00000002291 #37 osbpl3a (ENSLBEG00000002210) #36 TRIL (ENSLBEG00000002179) ENSLBEG00000002154 jazf1a (ENSLBEG00000002120) #12 tax1bp1a (ENSLBEG00000002045) #13 hibadha (ENSLBEG00000002000) evx1 (ENSLBEG00000001985) #15 hoxa13a (ENSLBEG00000001862) hoxa11a (ENSLBEG00000001844) #17 hoxa10b (ENSLBEG00000001831) ENSLBEG00000001814 HOXA7 (ENSLBEG00000001798) #20 hoxa5a (ENSLBEG00000001723) #22 HOXA4 (ENSLBEG00000001673) #23 hoxa3a (ENSLBEG00000001651) #24 ENSLBEG00000001637 hoxa1a (ENSLBEG00000001584) #26 Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Perciformes ANCESTRAL SPECIES 11 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Pike perch MODERN SPECIES 41 rims3 (ENSSLUG00000009621) ENSSLUG00000009628 ENSSLUG00000009633 #37 osbpl3a (ENSSLUG00000009717) #36 TRIL (ENSSLUG00000010971) ENSSLUG00000010975 jazf1a (ENSSLUG00000010981) #12 tax1bp1a (ENSSLUG00000011017) #13 hibadha (ENSSLUG00000011037) evx1 (ENSSLUG00000011184) #15 hoxa13a (ENSSLUG00000011191) hoxa11a (ENSSLUG00000011196) #17 ENSSLUG00000011201 ENSSLUG00000011207 HOXA7 (ENSSLUG00000011211) #20 hoxa5a (ENSSLUG00000011216) #22 HOXA4 (ENSSLUG00000011218) #23 hoxa3a (ENSSLUG00000011219) #24 ENSSLUG00000011223 hoxa1a (ENSSLUG00000011224) #26 snx10a (ENSSLUG00000011232) #29 cbx3a (ENSSLUG00000011259) #30 nfe2l3 (ENSSLUG00000011266) #32 ENSSLUG00000011269 ENSSLUG00000011273 COLQ (ENSSLUG00000011276) FKBP14 (ENSSLUG00000011283) ENSSLUG00000011287 #8 ENSSLUG00000011290 oxnad1 (ENSSLUG00000011292) ENSSLUG00000011298 Channel bull blenny MODERN SPECIES 2 rims3 (ENSCGOG00000001316) ENSCGOG00000001319 ENSCGOG00000001326 #37 osbpl3a (ENSCGOG00000001403) #36 TRIL (ENSCGOG00000002306) ENSCGOG00000002307 jazf1a (ENSCGOG00000002320) #12 tax1bp1a (ENSCGOG00000002329) #13 hibadha (ENSCGOG00000002339) evx1 (ENSCGOG00000002366) #15 hoxa13a (ENSCGOG00000002368) hoxa11a (ENSCGOG00000002371) #17 hoxa10b (ENSCGOG00000002380) ENSCGOG00000002392 HOXA7 (ENSCGOG00000002396) #20 hoxa5a (ENSCGOG00000002402) #22 HOXA4 (ENSCGOG00000002403) #23 hoxa3a (ENSCGOG00000002407) #24 ENSCGOG00000002408 hoxa1a (ENSCGOG00000002411) #26 snx10a (ENSCGOG00000002413) #29 cbx3a (ENSCGOG00000002431) #30 nfe2l3 (ENSCGOG00000002472) #32 ENSCGOG00000002473 ENSCGOG00000002478 COLQ (ENSCGOG00000002481) FKBP14 (ENSCGOG00000002494) ENSCGOG00000002489 #8 ENSCGOG00000002497 oxnad1 (ENSCGOG00000002500) ENSCGOG00000002501 Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Lumpfish MODERN SPECIES 2 smap2 (ENSCLMG00005020360) rims3 (ENSCLMG00005020359) nup42 (ENSCLMG00005020358) ENSCLMG00005020357 #37 osbpl3a (ENSCLMG00005020227) #36 TRIL (ENSCLMG00005020211) ENSCLMG00005020208 jazf1a (ENSCLMG00005020199) #12 tax1bp1a (ENSCLMG00005020195) #13 hibadha (ENSCLMG00005020131) evx1 (ENSCLMG00005020130) #15 hoxa13a (ENSCLMG00005020129) hoxa11a (ENSCLMG00005020127) #17 ENSCLMG00005020123 ENSCLMG00005020119 hoxa5a (ENSCLMG00005020117) #22 HOXA4 (ENSCLMG00005020116) #23 hoxa3a (ENSCLMG00005020115) #24 ENSCLMG00005020113 hoxa1a (ENSCLMG00005020112) #26 snx10a (ENSCLMG00005020105) #29 cbx3a (ENSCLMG00005020104) #30 nfe2l3 (ENSCLMG00005020103) #32 ENSCLMG00005020102 #33 ENSCLMG00005020101 ENSCLMG00005020100 FKBP14 (ENSCLMG00005020097) ENSCLMG00005020096 #8 ENSCLMG00005020092 oxnad1 (ENSCLMG00005020091) ENSCLMG00005020090 Stickleback MODERN SPECIES 9 rims3 (ENSGACG00000007223) nup42 (ENSGACG00000007219) ENSGACG00000007216 #37 osbpl3a (ENSGACG00000007208) #36 TRIL (ENSGACG00000007203) ENSGACG00000007196 jazf1a (ENSGACG00000007192) #12 tax1bp1a (ENSGACG00000007180) #13 hibadha (ENSGACG00000007155) evx1 (ENSGACG00000007148) #15 hoxa13a (ENSGACG00000007134) hoxa11a (ENSGACG00000007132) #17 hoxa10b (ENSGACG00000007128) ENSGACG00000007123 HOXA7 (ENSGACG00000007112) #20 hoxa5a (ENSGACG00000007108) #22 HOXA4 (ENSGACG00000007100) #23 hoxa3a (ENSGACG00000007094) #24 ENSGACG00000007090 hoxa1a (ENSGACG00000007085) #26 snx10a (ENSGACG00000007074) #29 cbx3a (ENSGACG00000007069) #30 nfe2l3 (ENSGACG00000007066) #32 cycsb (ENSGACG00000007058) ENSGACG00000007049 FKBP14 (ENSGACG00000007031) ENSGACG00000007025 #8 ENSGACG00000007024 oxnad1 (ENSGACG00000007010) ENSGACG00000007006 dazl (ENSGACG00000007001) Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Large yellow croaker MODERN SPECIES 484 rims3 (ENSLCRG00005008396) nup42 (ENSLCRG00005008398) ENSLCRG00005008401 #37 osbpl3a (ENSLCRG00005008414) #36 TRIL (ENSLCRG00005008796) ENSLCRG00005008798 jazf1a (ENSLCRG00005008799) #12 tax1bp1a (ENSLCRG00005008801) #13 hibadha (ENSLCRG00005008807) evx1 (ENSLCRG00005008873) #15 hoxa13a (ENSLCRG00005008874) hoxa11a (ENSLCRG00005008876) #17 ENSLCRG00005008877 ENSLCRG00005008882 HOXA7 (ENSLCRG00005008884) #20 hoxa5a (ENSLCRG00005008888) #22 HOXA4 (ENSLCRG00005008891) #23 hoxa3a (ENSLCRG00005008893) #24 ENSLCRG00005008895 hoxa1a (ENSLCRG00005008896) #26 snx10a (ENSLCRG00005008897) #29 cbx3a (ENSLCRG00005008899) #30 nfe2l3 (ENSLCRG00005008904) #32 ENSLCRG00005008906 #33 ENSLCRG00005008907 COLQ (ENSLCRG00005008908) FKBP14 (ENSLCRG00005008910) ENSLCRG00005008912 #8 ENSLCRG00005008913 oxnad1 (ENSLCRG00005008916) ENSLCRG00005008917 Gilthead seabream MODERN SPECIES 17 rims3 (ENSSAUG00010023178) nup42 (ENSSAUG00010023177) ENSSAUG00010023175 #37 osbpl3a (ENSSAUG00010023135) #36 TRIL (ENSSAUG00010023131) ENSSAUG00010023129 jazf1a (ENSSAUG00010023128) #12 tax1bp1a (ENSSAUG00010023127) #13 hibadha (ENSSAUG00010023125) evx1 (ENSSAUG00010023124) #15 hoxa13a (ENSSAUG00010023123) hoxa11a (ENSSAUG00010023122) #17 hoxa10b (ENSSAUG00010023121) ENSSAUG00010023119 HOXA7 (ENSSAUG00010023118) #20 hoxa5a (ENSSAUG00010023117) #22 HOXA4 (ENSSAUG00010023116) #23 hoxa3a (ENSSAUG00010023115) #24 ENSSAUG00010023114 hoxa1a (ENSSAUG00010023113) #26 snx10a (ENSSAUG00010023111) #29 cbx3a (ENSSAUG00010023110) #30 nfe2l3 (ENSSAUG00010023109) #32 ENSSAUG00010023108 ENSSAUG00010023107 ENSSAUG00010023106 FKBP14 (ENSSAUG00010023105) ENSSAUG00010023104 #8 ENSSAUG00010023103 oxnad1 (ENSSAUG00010023102) ENSSAUG00010023101 Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00940000158387 ENSGT00940000159332 ENSGT00390000000118 ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000156906.j.b ENSGT00940000155261.b ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.f ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 #8 ENSGT00760000119737 ENSGT00390000004280 ENSGT00530000063609.b.x ENSGT00530000063480.b Tetraodon MODERN SPECIES 15 smap2 (ENSTNIG00000009200) rims3 (ENSTNIG00000009201) nup42 (ENSTNIG00000001691) ENSTNIG00000000830 #37 osbpl3a (ENSTNIG00000009202) #36 ENSTNIG00000000262 ENSTNIG00000009203 jazf1a (ENSTNIG00000009204) #12 tax1bp1a (ENSTNIG00000009205) #13 hibadha (ENSTNIG00000009206) evx1 (ENSTNIG00000000875) #15 hoxa13a (ENSTNIG00000009207) hoxa11a (ENSTNIG00000001767) #17 hoxa10b (ENSTNIG00000001766) ENSTNIG00000001582 hoxa5a (ENSTNIG00000001756) #22 HOXA4 (ENSTNIG00000001755) #23 hoxa3a (ENSTNIG00000001754) #24 ENSTNIG00000001753 hoxa1a (ENSTNIG00000000977) #26 snx10a (ENSTNIG00000009208) #29 cbx3a (ENSTNIG00000001200) #30 nfe2l3 (ENSTNIG00000009209) #32 ENSTNIG00000009210 FKBP14 (ENSTNIG00000009211) oxnad1 (ENSTNIG00000009212) ENSTNIG00000009213 dazl (ENSTNIG00000001115) trappc3 (ENSTNIG00000009214) col8a2 (ENSTNIG00000009215) ptp4a2b (ENSTNIG00000001611) Fugu MODERN SPECIES 3 rims3 (ENSTRUG00000018155) nup42 (ENSTRUG00000023049) ENSTRUG00000020598 #37 osbpl3a (ENSTRUG00000018171) #36 ENSTRUG00000018191 ENSTRUG00000027270 ENSTRUG00000031997 Jazf1a (ENSTRUG00000028050) #12 tax1bp1a (ENSTRUG00000027936) #13 hibadha (ENSTRUG00000023488) Evx1 (ENSTRUG00000020143) #15 hoxa13a (ENSTRUG00000016010) hoxa11a (ENSTRUG00000020015) #17 hoxa10b (ENSTRUG00000015981) ENSTRUG00000015974 hoxa5a (ENSTRUG00000018252) #22 hoxa3a (ENSTRUG00000022811) #24 HOXA4 (ENSTRUG00000023173) #23 ENSTRUG00000015941 hoxa1a (ENSTRUG00000015937) #26 snx10a (ENSTRUG00000015910) #29 cbx3a (ENSTRUG00000015895) #30 nfe2l3 (ENSTRUG00000015857) #32 rfrp (ENSTRUG00000015852) #33 ENSTRUG00000024909 ENSTRUG00000015831 FKBP14 (ENSTRUG00000021578) ENSTRUG00000015805 #8 ENSTRUG00000020614 oxnad1 (ENSTRUG00000015784) dazl (ENSTRUG00000015745) Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 2 rims3 (ENSMMDG00005002432) nup42 (ENSMMDG00005002426) ENSMMDG00005002423 #37 osbpl3a (ENSMMDG00005001447) #36 TRIL (ENSMMDG00005001342) ENSMMDG00005001324 jazf1a (ENSMMDG00005001312) #12 tax1bp1a (ENSMMDG00005001294) #13 hibadha (ENSMMDG00005001180) evx1 (ENSMMDG00005001159) #15 hoxa13a (ENSMMDG00005001155) hoxa11a (ENSMMDG00005023116) #17 ENSMMDG00005023114 ENSMMDG00005023112 HOXA7 (ENSMMDG00005023109) #20 hoxa5a (ENSMMDG00005023106) #22 HOXA4 (ENSMMDG00005023105) #23 hoxa3a (ENSMMDG00005023103) #24 ENSMMDG00005023102 hoxa1a (ENSMMDG00005023101) #26 snx10a (ENSMMDG00005023096) #29 cbx3a (ENSMMDG00005023091) #30 nfe2l3 (ENSMMDG00005023087) #32 ENSMMDG00005023084 ENSMMDG00005023083 ENSMMDG00005023076 FKBP14 (ENSMMDG00005023075) ENSMMDG00005023073 #8 ENSMMDG00005023071 ENSMMDG00005023069 ENSMMDG00005023066 Pinecone sodierfish MODERN SPECIES 10 chad (ENSMMDG00005004897) armc7 (ENSMMDG00005004900) ndel1a (ENSMMDG00005004902) ARHGAP44 (ENSMMDG00005004905) stx4 (ENSMMDG00005004908) SRCAP (ENSMMDG00005004957) ENSMMDG00005005026 ENSMMDG00005005087 chmp2a (ENSMMDG00005005093) ENSMMDG00005005101 ENSMMDG00005005117 snf8 (ENSMMDG00005005122) calcoco2 (ENSMMDG00005005132) ##13 ttll6 (ENSMMDG00005005139) hoxb6b (ENSMMDG00005005148) ENSMMDG00005005152 #22 hoxb1b (ENSMMDG00005005153) skap1 (ENSMMDG00005005155) ##28 ENSMMDG00005005159 CBX1 (ENSMMDG00005005163) NFE2L1 (ENSMMDG00005005166) ##32 cdk5rap3 (ENSMMDG00005005179) prr15lb (ENSMMDG00005005803) pnpo (ENSMMDG00005005812) mrpl10 (ENSMMDG00005005826) osbpl7 (ENSMMDG00005005835) tbx21 (ENSMMDG00005005843) ENSMMDG00005005852 PDK2 (ENSMMDG00005005899) ENSMMDG00005006517 MYO1D (ENSMMDG00005006560) Cod MODERN SPECIES 14 ENSGMOG00000014200 ENSGMOG00000014179 ENSGMOG00000026304 ENSGMOG00000035459 #37 ENSGMOG00000014090 #36 TRIL (ENSGMOG00000026639) CREB5 (ENSGMOG00000013999) #11 jazf1a (ENSGMOG00000027822) #12 tax1bp1a (ENSGMOG00000013935) #13 hibadha (ENSGMOG00000013912) evx1 (ENSGMOG00000013898) #15 ENSGMOG00000027233 hoxa11a (ENSGMOG00000028868) #17 ENSGMOG00000024363 ENSGMOG00000036842 hoxa5a (ENSGMOG00000013854) #22 HOXA4 (ENSGMOG00000029383) #23 hoxa3a (ENSGMOG00000022984) #24 ENSGMOG00000013834 HOXA1 (ENSGMOG00000030787) #26 snx10a (ENSGMOG00000013310) #29 CBX3 (ENSGMOG00000013305) #30 nfe2l3 (ENSGMOG00000013292) #32 ENSGMOG00000022248 ENSGMOG00000013273 ENSGMOG00000013265 ENSGMOG00000026246 #8 ENSGMOG00000013231 KCNH8 (ENSGMOG00000006973) satb1a (ENSGMOG00000011439) tbc1d5 (ENSGMOG00000011459) Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000155348.A ENSGT00940000155880.f #37 ENSGT00940000155957.b #36 ENSGT00940000161975 ENSGT00940000156420.a.b.d #11 ENSGT00940000156420.a.b.c #11 ENSGT00390000003635.g.c #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a ENSGT00940000166648 ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000157883.a.b.f.wb ENSGT00940000161290 ENSGT00940000158302.d.b ENSGT00940000158302.e ENSGT00940000160103 ENSGT00940000154383.a.j ENSGT00940000154383.a.i ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000153270.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 158 ENSGT00940000165581.c.b ENSGT00940000159854.b #15 ENSGT00940000164071.b.b.b ENSGT00940000158311.a.a #17 ENSGT00940000163268.d.a.d ENSGT00940000166648.a ENSGT00940000161013.g #20 ENSGT00940000159894.m #22 ENSGT00940000158988.a.a.e #23 ENSGT00940000159522.u.a #24 ENSGT00940000155029.c.a.f.b ENSGT00940000157315.hc.b #26 ENSGT00940000156007.k.c #29 ENSGT00940000153305.k #30 ENSGT00950000182892.a.b.b.m.b #32 ENSGT01030000234992.a ENSGT00940000157883.a.b.f.wb ENSGT00940000161290.c ENSGT00940000158302.d.b.a ENSGT00940000158302.e ENSGT00940000160103.i.b ENSGT00940000154383.a.i.b ENSGT00940000154317.a.a.g.a Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00940000156475.f.b ENSGT00940000155348.A.f ENSGT00940000155880.f.a #37 ENSGT00940000155957.b.b #36 ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b #11 ENSGT00390000003635.g.c.a #12 ENSGT00950000183025.b.a.ab.c #13 ENSGT00940000165581.c.b ENSGT00940000159854.b #15 ENSGT00940000164071.b.b.b ENSGT00940000158311.a.a #17 ENSGT00940000163268.d.a.d ENSGT00940000166648.a ENSGT00940000161013.g #20 ENSGT00940000159894.m #22 ENSGT00940000158988.a.a.e #23 ENSGT00940000159522.u.a #24 ENSGT00940000155029.c.a.f.b ENSGT00940000157315.hc.b #26 ENSGT00940000156007.k.c #29 ENSGT00940000153305.k #30 ENSGT00950000182892.a.b.b.m.b #32 ENSGT01030000234992.a ENSGT00940000157883.a.b.f.wb ENSGT00940000161290.c ENSGT00940000158302.d.b.a ENSGT00940000158302.e ENSGT00940000160103.i.b ENSGT00940000154383.a.i.b ENSGT00940000154317.a.a.g.a Oncorhynchus ANCESTRAL SPECIES 29 ENSGT00940000155348.A.f ENSGT00940000155880.f.a #37 ENSGT00940000155957.b.b #36 ENSGT00940000156906.j.b ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b #11 ENSGT00390000003635.g.c.a #12 ENSGT00950000183025.b.a.ab.c #13 ENSGT00940000165581.c.b ENSGT00940000159854.b #15 ENSGT00940000164071.b.b.b ENSGT00940000158311.a.a #17 ENSGT00940000163268.d.a.d ENSGT00940000166648.a ENSGT00940000161013.g #20 ENSGT00940000159894.m #22 ENSGT00940000158988.a.a.e #23 ENSGT00940000159522.u.a #24 ENSGT00940000155029.c.a.f.b ENSGT00940000157315.hc.b #26 ENSGT00940000156007.k.c #29 ENSGT00940000153305.k #30 ENSGT00950000182892.a.b.b.m.b #32 ENSGT01030000234992.a ENSGT00940000157883.a.b.f.wb ENSGT00940000161290.c ENSGT00940000158302.d.b.a ENSGT00940000158302.e ENSGT00940000160103.i.b ENSGT00940000154383.a.i.b ENSGT00940000154317.a.a.g.a Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00940000156475.f.b ENSGT00940000155348.A.f ENSGT00940000155880.f.a #37 ENSGT00940000155957.b.b #36 ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b #11 ENSGT00390000003635.g.c.a #12 ENSGT00950000183025.b.a.ab.c #13 ENSGT00940000165581.c.b ENSGT00940000159854.b #15 ENSGT00940000164071.b.b.b ENSGT00940000158311.a.a #17 ENSGT00940000163268.d.a.d ENSGT00940000166648.a ENSGT00940000161013.g #20 ENSGT00940000159894.m #22 ENSGT00940000159522.u.a #24 ENSGT00940000158988.a.a.e #23 ENSGT00940000155029.c.a.f.b ENSGT00940000157315.hc.b #26 ENSGT00940000156007.k.c #29 ENSGT00940000153305.k #30 ENSGT00950000182892.a.b.b.m.b #32 ENSGT01030000234992.a ENSGT00940000157883.a.b.f.wb ENSGT00940000161290.c ENSGT00940000158302.d.b.a ENSGT00940000160103.i.b ENSGT00940000154383.a.i.b ENSGT00940000154317.a.a.g.a ENSGT00390000003880.b.a.c Chinook salmon MODERN SPECIES 4 fam221a (ENSOTSG00005010614) npy (ENSOTSG00005010616) ENSOTSG00005001614 ENSOTSG00005001731 ENSOTSG00005001733 #37 osbpl3a (ENSOTSG00005001739) #36 TRIL (ENSOTSG00005001743) CREB5 (ENSOTSG00005001744) #11 jazf1a (ENSOTSG00005001749) #12 tax1bp1a (ENSOTSG00005001754) #13 ENSOTSG00005001755 EVX1 (ENSOTSG00005001760) #15 hoxa13a (ENSOTSG00005001763) hoxa11a (ENSOTSG00005001766) #17 ENSOTSG00005001772 hoxa5a (ENSOTSG00005001781) #22 HOXA4 (ENSOTSG00005001783) #23 hoxa3a (ENSOTSG00005001788) #24 snx10a (ENSOTSG00005001794) #29 cbx3a (ENSOTSG00005001797) #30 nfe2l3 (ENSOTSG00005001828) #32 ENSOTSG00005001831 ENSOTSG00005001836 ENSOTSG00005001840 col9a2 (ENSOTSG00005001841) ENSOTSG00005001846 ptp4a2b (ENSOTSG00005001864) col8a2 (ENSOTSG00005001927) si:dkeyp-120h9.1 (ENSOTSG00005001952) hey1 (ENSOTSG00005003584) zbtb10 (ENSOTSG00005003750) Coho salmon MODERN SPECIES 8 ENSOKIG00005045592 ENSOKIG00005045644 #37 ENSOKIG00005045651 ENSOKIG00005045656 TRIL (ENSOKIG00005045677) CREB5 (ENSOKIG00005045687) #11 jazf1a (ENSOKIG00005045695) #12 tax1bp1a (ENSOKIG00005045707) #13 ENSOKIG00005045717 EVX1 (ENSOKIG00005045730) #15 ENSOKIG00005045738 hoxa11a (ENSOKIG00005045750) #17 ENSOKIG00005045757 ENSOKIG00005045764 HOXA7 (ENSOKIG00005045777) #20 hoxa5a (ENSOKIG00005045791) #22 hoxa3a (ENSOKIG00005045805) #24 HOXA4 (ENSOKIG00005045809) #23 ENSOKIG00005045814 HOXA1 (ENSOKIG00005045820) #26 snx10a (ENSOKIG00005045843) #29 CBX3 (ENSOKIG00005045853) #30 nfe2l3 (ENSOKIG00005045874) #32 ENSOKIG00005045878 ENSOKIG00005004272 col9a2 (ENSOKIG00005004293) ENSOKIG00005004328 ENSOKIG00005004363 ADGRB2 (ENSOKIG00005004444) ENSOKIG00005004724 ENSOKIG00005004734 Rainbow trout MODERN SPECIES 9 ccdc126 (ENSOMYG00000013038) fam221a (ENSOMYG00000013027) npy (ENSOMYG00000013012) ENSOMYG00000012952 ENSOMYG00000012920 #37 TRIL (ENSOMYG00000012751) CREB5 (ENSOMYG00000012745) #11 jazf1a (ENSOMYG00000012732) #12 tax1bp1a (ENSOMYG00000012797) #13 EVX1 (ENSOMYG00000012716) #15 hoxa13a (ENSOMYG00000012707) hoxa11a (ENSOMYG00000012704) #17 ENSOMYG00000012697 ENSOMYG00000012685 HOXA7 (ENSOMYG00000012674) #20 hoxa5a (ENSOMYG00000012670) #22 HOXA4 (ENSOMYG00000012666) #23 HOXA3 (ENSOMYG00000012659) #24 ENSOMYG00000012652 ENSOMYG00000054049 snx10a (ENSOMYG00000012638) #29 ENSOMYG00000012624 #30 nfe2l3 (ENSOMYG00000012612) #32 ENSOMYG00000012602 ENSOMYG00000012598 col9a2 (ENSOMYG00000005383) ENSOMYG00000005326 ENSOMYG00000074617 ENSOMYG00000012420 ENSOMYG00000040750 ptp4a2b (ENSOMYG00000012355) Salmo ANCESTRAL SPECIES 2 ENSGT00940000156475.f.b ENSGT00940000155348.A.f ENSGT00940000155880.f.a #37 ENSGT00940000155957.b.b #36 ENSGT00940000161975.a ENSGT00940000156420.a.b.c.b #11 ENSGT00390000003635.g.c.a #12 ENSGT00950000183025.b.a.ab.c #13 ENSGT00940000165581.c.b ENSGT00940000159854.b #15 ENSGT00940000164071.b.b.b ENSGT00940000158311.a.a #17 ENSGT00940000163268.d.a.d ENSGT00940000166648.a ENSGT00940000161013.g #20 ENSGT00940000159894.m #22 ENSGT00940000158988.a.a.e #23 ENSGT00940000159522.u.a #24 ENSGT00940000155029.c.a.f.b ENSGT00940000157315.hc.b #26 ENSGT00940000156007.k.c #29 ENSGT00940000153305.k #30 ENSGT00950000182892.a.b.b.m.b #32 ENSGT01030000234992.a ENSGT00940000157883.a.b.f.wb ENSGT00940000161290.c ENSGT00940000158302.d.b.a ENSGT00940000160103.i.b ENSGT00940000154383.a.i.b ENSGT00940000154317.a.a.g.a ENSGT00390000003880.b.a.c Atlantic salmon MODERN SPECIES 19 GSDME (ENSSSAG00000053254) #37 ENSSSAG00000093176 osbpl3a (ENSSSAG00000053184) #36 CREB5 (ENSSSAG00000053146) #11 ENSSSAG00000111402 JAZF1 (ENSSSAG00000114494) #12 ENSSSAG00000089230 tax1bp1a (ENSSSAG00000053115) #13 ENSSSAG00000085548 ENSSSAG00000053109 EVX1 (ENSSSAG00000053107) #15 hoxa13 (ENSSSAG00000053102) hoxa11ab (ENSSSAG00000053097) #17 hoxa10ab (ENSSSAG00000053094) ENSSSAG00000095697 hoxa5aa (ENSSSAG00000053069) #22 hoxa4aa (ENSSSAG00000053060) #23 hoxa3ab (ENSSSAG00000053050) #24 hoxa2ab (ENSSSAG00000053040) HOXA1 (ENSSSAG00000083647) #26 ENSSSAG00000111158 ENSSSAG00000118316 snx10a (ENSSSAG00000114556) #29 CBX3 (ENSSSAG00000052931) #30 nfe2l3 (ENSSSAG00000052910) #32 ENSSSAG00000052895 ENSSSAG00000111371 ENSSSAG00000103162 ENSSSAG00000106578 ENSSSAG00000116732 ENSSSAG00000114374 River trout MODERN SPECIES 27 GSDME (ENSSTUG00000019636) #37 osbpl3a (ENSSTUG00000019417) #36 ENSSTUG00000019376 TRIL (ENSSTUG00000019352) CREB5 (ENSSTUG00000019318) #11 jazf1a (ENSSTUG00000019298) #12 ENSSTUG00000019287 tax1bp1a (ENSSTUG00000019255) #13 ENSSTUG00000019249 EVX1 (ENSSTUG00000019239) #15 hoxa13a (ENSSTUG00000019226) hoxa11a (ENSSTUG00000019219) #17 hoxa10b (ENSSTUG00000019212) ENSSTUG00000019197 HOXA7 (ENSSTUG00000019182) #20 hoxa5a (ENSSTUG00000019174) #22 HOXA4 (ENSSTUG00000019162) #23 hoxa3a (ENSSTUG00000019151) #24 ENSSTUG00000019141 hoxa1a (ENSSTUG00000019096) #26 snx10a (ENSSTUG00000019085) #29 cbx3a (ENSSTUG00000019056) #30 nfe2l3 (ENSSTUG00000019045) #32 ENSSTUG00000019034 ENSSTUG00000019019 ENSSTUG00000019012 col9a2 (ENSSTUG00000018988) ENSSTUG00000018970 ADGRB2 (ENSSTUG00000018312) ptp4a2b (ENSSTUG00000018246) col8a2 (ENSSTUG00000018231) Salmoninae ANCESTRAL SPECIES 136 ENSGT00940000156475.f.a ENSGT00940000155348.A.e ENSGT00940000155880.f.b #37 ENSGT00940000155957.b.a #36 ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a #11 ENSGT00390000003635.g.c.b #12 ENSGT00950000183025.b.a.ab.d #13 ENSGT00940000165581.c.a ENSGT00940000159854.a #15 ENSGT00940000164071.b.b.a ENSGT00940000158311.a.b #17 ENSGT00940000163268.d.a.c ENSGT00940000166648.b ENSGT00940000161013.h #20 ENSGT00940000159894.n #22 ENSGT00940000158988.a.a.f #23 ENSGT00940000159522.u.b #24 ENSGT00940000155029.c.a.f.a ENSGT00940000157315.hc.a #26 ENSGT00940000156007.k.d #29 ENSGT00940000153305.l #30 ENSGT00950000182892.a.b.b.m.a #32 ENSGT00390000003271 #33 Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000156475.f.a ENSGT00940000155348.A.e ENSGT00940000155880.f.b #37 ENSGT00940000155957.b.a #36 ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a #11 ENSGT00390000003635.g.c.b #12 ENSGT00950000183025.b.a.ab.d #13 ENSGT00940000165581.c.a ENSGT00940000159854.a #15 ENSGT00940000164071.b.b.a ENSGT00940000158311.a.b #17 ENSGT00940000163268.d.a.c ENSGT00940000166648.b ENSGT00940000161013.h #20 ENSGT00940000159894.n #22 ENSGT00940000158988.a.a.f #23 ENSGT00940000159522.u.b #24 ENSGT00940000155029.c.a.f.a ENSGT00940000157315.hc.a #26 ENSGT00940000156007.k.d #29 ENSGT00940000153305.l #30 ENSGT00950000182892.a.b.b.m.a #32 ENSGT00390000003271 #33 ENSGT01030000234992.b ENSGT00940000161290.d ENSGT00940000158302.d.b.b ENSGT00940000158302.d.a.k ENSGT00940000160103.i.a ENSGT00940000154383.a.j.b ENSGT00940000154317.a.a.g.b Salmo ANCESTRAL SPECIES 2 ENSGT00940000156475.f.a ENSGT00940000158500.r ENSGT00940000155348.A.e ENSGT00940000155880.f.b #37 ENSGT00940000155957.b.a #36 ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a #11 ENSGT00390000003635.g.c.b #12 ENSGT00950000183025.b.a.ab.d #13 ENSGT00940000165581.c.a ENSGT00940000159854.a #15 ENSGT00940000164071.b.b.a ENSGT00940000158311.a.b #17 ENSGT00940000163268.d.a.c ENSGT00940000166648.b ENSGT00940000159894.n #22 ENSGT00940000158988.a.a.f #23 ENSGT00940000159522.u.b #24 ENSGT00940000155029.c.a.f.a ENSGT00940000157315.hc.a #26 ENSGT00940000156007.k.d #29 ENSGT00940000153305.l #30 ENSGT00950000182892.a.b.b.m.a #32 ENSGT01030000234992.b ENSGT00940000161290.d ENSGT00940000158302.d.b.b ENSGT00940000160103.i.a ENSGT00940000154383.a.i.a ENSGT00940000154317.a.a.g.b ENSGT00390000003880.b.a.d ENSGT00950000182774.a.a.b.a.a Atlantic salmon MODERN SPECIES 5 ENSSSAG00000009104 ENSSSAG00000040473 GSDME (ENSSSAG00000067817) #37 osbpl3a (ENSSSAG00000065307) #36 TRIL (ENSSSAG00000106156) CREB5 (ENSSSAG00000065214) #11 jazf1a (ENSSSAG00000065204) #12 ENSSSAG00000103120 tax1bp1a (ENSSSAG00000065188) #13 ENSSSAG00000065080 EVX1 (ENSSSAG00000065073) #15 hoxa13aa (ENSSSAG00000065068) hoxa11aa (ENSSSAG00000065063) #17 ENSSSAG00000118319 hoxa9ab (ENSSSAG00000065038) hoxa5a (ENSSSAG00000065028) #22 hoxa4a (ENSSSAG00000065018) #23 hoxa3a (ENSSSAG00000065011) #24 hoxa2aa (ENSSSAG00000065006) hoxa1a (ENSSSAG00000082638) #26 snx10a (ENSSSAG00000117399) #29 cbx3 (ENSSSAG00000064790) #30 nfe2l3 (ENSSSAG00000095537) #32 ENSSSAG00000104433 col9a2 (ENSSSAG00000064768) ENSSSAG00000097270 ENSSSAG00000090253 ENSSSAG00000027483 ENSSSAG00000046244 tp4a2 (ENSSSAG00000046480) ENSSSAG00000101004 River trout MODERN SPECIES 29 tra2a (ENSSTUG00000046838) ccdc126 (ENSSTUG00000046833) npy (ENSSTUG00000046812) pals2b (ENSSTUG00000046798) ENSSTUG00000046790 GSDME (ENSSTUG00000046784) #37 osbpl3a (ENSSTUG00000046765) #36 TRIL (ENSSTUG00000046754) CREB5 (ENSSTUG00000046744) #11 jazf1a (ENSSTUG00000046732) #12 tax1bp1a (ENSSTUG00000046720) #13 ENSSTUG00000046667 EVX1 (ENSSTUG00000046662) #15 hoxa13a (ENSSTUG00000046658) hoxa11a (ENSSTUG00000046652) #17 hoxa5a (ENSSTUG00000046646) #22 HOXA4 (ENSSTUG00000046643) #23 hoxa3a (ENSSTUG00000046619) #24 ENSSTUG00000046602 hoxa1a (ENSSTUG00000046591) #26 snx10a (ENSSTUG00000046585) #29 cbx3a (ENSSTUG00000046557) #30 nfe2l3 (ENSSTUG00000046551) #32 ENSSTUG00000046547 ENSSTUG00000046517 ENSSTUG00000046508 ENSSTUG00000046503 ENSSTUG00000046500 ptp4a2b (ENSSTUG00000046474) col8a2 (ENSSTUG00000046470) ENSSTUG00000046466 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00940000156475.f.a ENSGT00940000155348.A.e ENSGT00940000155880.f.b #37 ENSGT00940000155957.b.a #36 ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a #11 ENSGT00390000003635.g.c.b #12 ENSGT00950000183025.b.a.ab.d #13 ENSGT00940000165581.c.a ENSGT00940000159854.a #15 ENSGT00940000164071.b.b.a ENSGT00940000158311.a.b #17 ENSGT00940000163268.d.a.c ENSGT00940000166648.b ENSGT00940000161013.h #20 ENSGT00940000159894.n #22 ENSGT00940000158988.a.a.f #23 ENSGT00940000159522.u.b #24 ENSGT00940000155029.c.a.f.a ENSGT00940000157315.hc.a #26 ENSGT00940000156007.k.d #29 ENSGT00940000153305.l #30 ENSGT00950000182892.a.b.b.m.a #32 ENSGT00390000003271 #33 ENSGT01030000234992.b ENSGT00940000161290.d ENSGT00940000158302.d.b.b ENSGT00940000158302.d.a.k ENSGT00940000160103.i.a ENSGT00940000154383.a.j.b ENSGT00940000154383.a.j.a Rainbow trout MODERN SPECIES 24 GSDME (ENSOMYG00000006469) #37 ENSOMYG00000049320 osbpl3a (ENSOMYG00000006444) #36 CREB5 (ENSOMYG00000006314) #11 ENSOMYG00000073184 ENSOMYG00000006352 tax1bp1a (ENSOMYG00000012725) #13 ENSOMYG00000059680 hibadha (ENSOMYG00000006005) EVX1 (ENSOMYG00000005935) #15 ENSOMYG00000005868 hoxa11a (ENSOMYG00000053299) #17 ENSOMYG00000005816 ENSOMYG00000005794 HOXA7 (ENSOMYG00000060173) #20 hoxa5a (ENSOMYG00000005721) #22 HOXA4 (ENSOMYG00000005706) #23 HOXA3 (ENSOMYG00000067402) #24 ENSOMYG00000005648 HOXA1 (ENSOMYG00000005629) #26 ENSOMYG00000063825 ENSOMYG00000064397 snx10a (ENSOMYG00000056461) #29 ENSOMYG00000075549 snx10a (ENSOMYG00000005605) #29 ENSOMYG00000057329 CBX3 (ENSOMYG00000066476) #30 nfe2l3 (ENSOMYG00000005546) #32 ENSOMYG00000058163 ENSOMYG00000005433 ENSOMYG00000012584 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00990000210143 ENSGT00940000156475.f.a ENSGT00940000155348.A.e ENSGT00940000155880.f.b #37 ENSGT00940000155957.b.a #36 ENSGT00940000161975.b ENSGT00940000156420.a.b.c.a #11 ENSGT00390000003635.g.c.b #12 ENSGT00950000183025.b.a.ab.d #13 ENSGT00940000165581.c.a ENSGT00940000159854.a #15 ENSGT00940000164071.b.b.a ENSGT00940000158311.a.b #17 ENSGT00940000163268.d.a.c ENSGT00940000166648.b ENSGT00940000159894.n #22 ENSGT00940000158988.a.a.f #23 ENSGT00940000159522.u.b #24 ENSGT00940000155029.c.a.f.a ENSGT00940000157315.hc.a #26 ENSGT00940000156007.k.d #29 ENSGT00940000153305.l #30 ENSGT00950000182892.a.b.b.m.a #32 ENSGT00390000003271 #33 ENSGT01030000234992.b ENSGT00940000161290.d ENSGT00940000158302.d.b.b ENSGT00940000158302.d.a.k ENSGT00940000160103.i.a ENSGT00940000154383.a.j.a ENSGT00940000154317.a.a.g.b Chinook salmon MODERN SPECIES 65 TRIL (ENSOTSG00005031346) CREB5 (ENSOTSG00005031345) #11 jazf1a (ENSOTSG00005031344) #12 ENSOTSG00005031343 #13 ENSOTSG00005031314 EVX1 (ENSOTSG00005031312) #15 hoxa13a (ENSOTSG00005031311) hoxa11a (ENSOTSG00005031310) #17 hoxa10b (ENSOTSG00005031307) hoxa5a (ENSOTSG00005031306) #22 HOXA4 (ENSOTSG00005031305) #23 hoxa3a (ENSOTSG00005031301) #24 hoxa1a (ENSOTSG00005031298) #26 snx10a (ENSOTSG00005031296) #29 cbx3a (ENSOTSG00005031251) #30 nfe2l3 (ENSOTSG00005012838) #32 ENSOTSG00005012837 #33 ENSOTSG00005012835 Coho salmon MODERN SPECIES 5 npy (ENSOKIG00005006512) ENSOKIG00005006623 GSDME (ENSOKIG00005008643) #37 osbpl3a (ENSOKIG00005008676) #36 TRIL (ENSOKIG00005008967) CREB5 (ENSOKIG00005009012) #11 ENSOKIG00005009015 #11 jazf1a (ENSOKIG00005009022) #12 tax1bp1a (ENSOKIG00005009040) #13 ENSOKIG00005009061 EVX1 (ENSOKIG00005009149) #15 hoxa13a (ENSOKIG00005009160) hoxa11a (ENSOKIG00005009170) #17 ENSOKIG00005009180 ENSOKIG00005009193 hoxa5a (ENSOKIG00005009216) #22 HOXA4 (ENSOKIG00005009230) #23 hoxa3a (ENSOKIG00005009246) #24 ENSOKIG00005009258 hoxa1a (ENSOKIG00005009277) #26 SNX10 (ENSOKIG00005009287) #29 nfe2l3 (ENSOKIG00005009311) #32 ENSOKIG00005009442 col9a2 (ENSOKIG00005009453) ENSOKIG00005009461 ENSOKIG00005009486 ENSOKIG00005009494 ADGRB2 (ENSOKIG00005009529) ENSOKIG00005009959 ptp4a2b (ENSOKIG00005009965) COL8A2 (ENSOKIG00005009988) Huchen MODERN SPECIES 1721 TRIL (ENSHHUG00000036174) CREB5 (ENSHHUG00000036184) #11 ENSHHUG00000036188 jazf1a (ENSHHUG00000036201) #12 tax1bp1a (ENSHHUG00000036208) #13 hibadha (ENSHHUG00000036216) EVX1 (ENSHHUG00000036232) #15 hoxa13a (ENSHHUG00000036245) hoxa11a (ENSHHUG00000036262) #17 hoxa10b (ENSHHUG00000036267) ENSHHUG00000036272 HOXA7 (ENSHHUG00000036277) #20 hoxa5a (ENSHHUG00000036281) #22 hoxa3a (ENSHHUG00000036288) #24 HOXA4 (ENSHHUG00000036297) #23 ENSHHUG00000036310 hoxa1a (ENSHHUG00000036347) #26 Northern pike MODERN SPECIES 9 npy (ENSELUG00000005748) ENSELUG00000001355 GSDME (ENSELUG00000001264) #37 osbpl3a (ENSELUG00000000150) #36 TRIL (ENSELUG00000005411) CREB5 (ENSELUG00000005385) #11 jazf1a (ENSELUG00000005364) #12 tax1bp1a (ENSELUG00000005336) #13 hibadha (ENSELUG00000005263) evx1 (ENSELUG00000005188) #15 hoxa13a (ENSELUG00000005145) hoxa11a (ENSELUG00000005123) #17 hoxa10b (ENSELUG00000005073) ENSELUG00000028773 HOXA7 (ENSELUG00000028152) #20 hoxa5a (ENSELUG00000005024) #22 HOXA4 (ENSELUG00000028027) #23 hoxa3a (ENSELUG00000005012) #24 ENSELUG00000004984 hoxa1a (ENSELUG00000004945) #26 snx10a (ENSELUG00000004919) #29 ENSELUG00000028209 cbx3a (ENSELUG00000004880) #30 nfe2l3 (ENSELUG00000004851) #32 ENSELUG00000004814 ENSELUG00000004670 ADGRB2 (ENSELUG00000004574) ENSELUG00000033096 ptp4a2b (ENSELUG00000004419) col8a2 (ENSELUG00000030174) trappc3 (ENSELUG00000004334) Otomorpha ANCESTRAL SPECIES 172 ENSGT00390000010145.c.b ENSGT00940000157248.c.b ENSGT00940000160267 #8 ENSGT00760000119737.a ENSGT00990000205799 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.b ENSGT00940000166648 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000157883.a.b.f ENSGT00950000182892.a.a.b.e ##32 ENSGT01030000234992 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 Otophysi ANCESTRAL SPECIES 152 ENSGT00390000010145.c.b ENSGT00940000157248.c.b ENSGT00940000160267 #8 ENSGT00760000119737.a ENSGT00990000205799 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.b ENSGT00940000166648 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00390000004280 Characiphysae ANCESTRAL SPECIES 99 ENSGT00390000010145.c.b ENSGT00940000157248.c.b ENSGT00940000160267 #8 ENSGT00760000119737.a ENSGT00990000205799 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.b ENSGT00940000166648 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.e.b ENSGT00940000157315.kc #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 Characiphysae_b ANCESTRAL SPECIES 1 ENSGT00390000010145.c.b ENSGT00940000157248.c.b ENSGT00940000160267 #8 ENSGT00760000119737.a ENSGT00990000205799 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.b ENSGT00940000166648 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000159522 #24 ENSGT00940000155029.c.a.e.b ENSGT00940000157315.kc #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 Characoidei ANCESTRAL SPECIES 62 ENSGT00530000063688.b.ob ENSGT00390000010145.c.b ENSGT00940000157248.c.b ENSGT00940000160267 #8 ENSGT00990000205799 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.b ENSGT00940000166648 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000155029.c.a.e.b ENSGT00940000157315.kc #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B Red-bellied piranha MODERN SPECIES 29 ENSPNAG00000008067 ENSPNAG00000008045 #8 ENSPNAG00000008032 ENSPNAG00000000606 CREB5 (ENSPNAG00000008023) #11 jazf1a (ENSPNAG00000008012) #12 tax1bp1a (ENSPNAG00000000582) #13 hibadha (ENSPNAG00000007995) ENSPNAG00000007989 evx1 (ENSPNAG00000007983) #15 hoxa13a (ENSPNAG00000007974) hoxa11a (ENSPNAG00000000562) #17 ENSPNAG00000007968 ENSPNAG00000000559 HOXA4 (ENSPNAG00000007964) #23 hoxa5a (ENSPNAG00000007959) #22 hoxa3a (ENSPNAG00000000544) #24 ENSPNAG00000007951 hoxa1a (ENSPNAG00000007947) #26 snx10a (ENSPNAG00000007934) #29 cbx3a (ENSPNAG00000007919) #30 nfe2l3 (ENSPNAG00000007908) #32 npvf (ENSPNAG00000007901) #33 osbpl3a (ENSPNAG00000007889) #36 ENSPNAG00000000516 #37 ENSPNAG00000000507 npy (ENSPNAG00000000490) fam221a (ENSPNAG00000007821) ccdc126 (ENSPNAG00000000485) tra2a (ENSPNAG00000000482) igf2bp3 (ENSPNAG00000000470) Mexicana tetra MODERN SPECIES 49 ASTE1 (ENSAMXG00000016856) ENSAMXG00000033022 WIPF3 (ENSAMXG00000030477) #8 ENSAMXG00000043051 CREB5 (ENSAMXG00000039018) #11 jazf1a (ENSAMXG00000043930) #12 ENSAMXG00000039695 tax1bp1a (ENSAMXG00000033050) #13 hibadha (ENSAMXG00000007828) ENSAMXG00000035504 evx1 (ENSAMXG00000031807) #15 hoxa13a (ENSAMXG00000029915) hoxa11a (ENSAMXG00000036161) #17 ENSAMXG00000035583 ENSAMXG00000005199 hoxa5a (ENSAMXG00000037678) #22 hoxa3a (ENSAMXG00000029041) #24 HOXA4 (ENSAMXG00000036478) #23 ENSAMXG00000043544 hoxa1a (ENSAMXG00000005258) #26 ENSAMXG00000042268 fam221a (ENSAMXG00000005524) ccdc126 (ENSAMXG00000039633) tra2a (ENSAMXG00000005553) ENSAMXG00000036147 igf2bp3 (ENSAMXG00000007453) GPNMB (ENSAMXG00000007393) oxnad1 (ENSAMXG00000007345) RFTN1 (ENSAMXG00000007317) dazl (ENSAMXG00000035291) tbc1d5 (ENSAMXG00000007142) Electric eel MODERN SPECIES 231 ASTE1 (ENSEEEG00000001479) ENSEEEG00000001480 ENSEEEG00000001483 #8 ENSEEEG00000001486 ENSEEEG00000001489 TRIL (ENSEEEG00000001491) CREB5 (ENSEEEG00000001492) #11 jazf1a (ENSEEEG00000001495) #12 tax1bp1a (ENSEEEG00000001496) #13 ENSEEEG00000001497 evx1 (ENSEEEG00000001499) #15 hoxa13a (ENSEEEG00000001502) hoxa11a (ENSEEEG00000001503) #17 ENSEEEG00000001505 ENSEEEG00000001506 hoxa5a (ENSEEEG00000001507) #22 HOXA4 (ENSEEEG00000001508) #23 hoxa3a (ENSEEEG00000001510) #24 ENSEEEG00000001512 hoxa1a (ENSEEEG00000001513) #26 snx10a (ENSEEEG00000001519) #29 cbx3a (ENSEEEG00000001557) #30 nfe2l3 (ENSEEEG00000001593) #32 npvf (ENSEEEG00000001595) #33 osbpl3a (ENSEEEG00000001599) #36 Cyprinoidei ANCESTRAL SPECIES 33 ENSGT00530000063688.b.ob ENSGT00390000010145.c.b ENSGT00940000157248.c.b ENSGT00940000160267 #8 ENSGT00760000119737.a ENSGT00990000205799 ENSGT00940000161975 ENSGT00940000156420.a.b.a #11 ENSGT00390000003635.g #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000165581.g.a ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000166648 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT00390000003271 #33 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B ENSGT00950000183188.B ENSGT00390000004280 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 190 ENSGT00440000034270.a.a.c ENSGT00940000156347.e.c ENSGT00530000063688.b.ob.a ENSGT00390000010145.c.b.p ENSGT00940000160267.a #8 ENSGT00760000119737.a ENSGT00940000161975.c ENSGT00940000156420.a.b.a.b #11 ENSGT00390000003635.g.b #12 ENSGT00950000183025.b.a.ab.f #13 ENSGT00940000165581.g.a.a ENSGT00940000159854.c #15 ENSGT00940000164071.b.b.d ENSGT00940000158311.a.d #17 ENSGT00940000166648.d ENSGT00940000159894.o #22 ENSGT00940000158988.a.a.h #23 ENSGT00940000159522.i.b #24 ENSGT00940000155029.c.a.e.b.a ENSGT00940000157315.kc.c #26 ENSGT00940000156007.k.a #29 ENSGT00940000153305.i #30 ENSGT00950000182892.a.b.b.l #32 ENSGT00390000003271.c #33 ENSGT00940000155957.b.d #36 ENSGT00940000155880.f.e #37 ENSGT00940000155348.A.j ENSGT00940000156475.f.d Goldfish MODERN SPECIES 38 npy (ENSCARG00000030446) ENSCARG00000030534 ENSCARG00000032016 #37 osbpl3a (ENSCARG00000032064) #36 ENSCARG00000032558 #8 ENSCARG00000032573 TRIL (ENSCARG00000032590) CREB5 (ENSCARG00000032602) #11 jazf1a (ENSCARG00000032615) #12 tax1bp1a (ENSCARG00000032635) #13 hibadha (ENSCARG00000032652) EVX1 (ENSCARG00000032682) #15 hoxa13a (ENSCARG00000032696) hoxa11a (ENSCARG00000032708) #17 ENSCARG00000032718 hoxa5a (ENSCARG00000032733) #22 HOXA4 (ENSCARG00000032742) #23 hoxa3a (ENSCARG00000032760) #24 ENSCARG00000032770 hoxa1a (ENSCARG00000032793) #26 snx10a (ENSCARG00000032802) #29 cbx3a (ENSCARG00000032814) #30 nfe2l3 (ENSCARG00000032830) #32 npvf (ENSCARG00000032846) #33 PTDSS1 (ENSCARG00000032875) STMND1 (ENSCARG00000033057) rbm24a (ENSCARG00000033062) cap2 (ENSCARG00000033170) vps28 (ENSCARG00000036198) ENSCARG00000036207 grinaa (ENSCARG00000036281) Cyprininae_a ANCESTRAL SPECIES 191 ENSGT00440000034270.a.a.c ENSGT00940000156347.e.c ENSGT00530000063688.b.ob.a ENSGT00390000010145.c.b.p ENSGT00940000160267.a #8 ENSGT00760000119737.a ENSGT00940000161975.c ENSGT00940000156420.a.b.a.b #11 ENSGT00390000003635.g.b #12 ENSGT00950000183025.b.a.ab.f #13 ENSGT00940000165581.g.a.a ENSGT00940000159854.c #15 ENSGT00940000164071.b.b.d ENSGT00940000158311.a.d #17 ENSGT00940000166648.d ENSGT00940000159894.o #22 ENSGT00940000158988.a.a.h #23 ENSGT00940000159522.i.b #24 ENSGT00940000155029.c.a.e.b.a ENSGT00940000157315.kc.c #26 ENSGT00940000156007.k.a #29 ENSGT00940000153305.i #30 ENSGT00950000182892.a.b.b.l #32 ENSGT00390000003271.c #33 ENSGT00940000155957.b.d #36 Common carp reference MODERN SPECIES 31 ptpn23b (ENSCCRG00000001694) ENSCCRG00000072425 cspg5b (ENSCCRG00000050267) smarcc1b (ENSCCRG00000050314) ENSCCRG00000019638 ENSCCRG00000070516 ENSCCRG00000082296 #8 ENSCCRG00000075077 CREB5 (ENSCCRG00000019620) #11 jazf1a (ENSCCRG00000054496) #12 tax1bp1a (ENSCCRG00000019584) #13 ENSCCRG00000058704 EVX1 (ENSCCRG00000001663) #15 hoxa13a (ENSCCRG00000001656) hoxa11a (ENSCCRG00000001646) #17 hoxa5a (ENSCCRG00000082248) #22 ENSCCRG00000019572 hoxa3a (ENSCCRG00000055555) #24 ENSCCRG00000065947 HOXA1 (ENSCCRG00000019554) #26 snx10a (ENSCCRG00000059432) #29 CBX3 (ENSCCRG00000019533) #30 nfe2l3 (ENSCCRG00000082240) #32 npvf (ENSCCRG00000066501) #33 osbpl3a (ENSCCRG00000037850) #36 ENSCCRG00000082773 #37 ENSCCRG00000026632 npy (ENSCCRG00000013855) fam221a (ENSCCRG00000057810) ccdc126 (ENSCCRG00000073389) tra2a (ENSCCRG00000030052) Golden-line barbel MODERN SPECIES 324 ptpn23b (ENSSGRG00000008666) cspg5b (ENSSGRG00000008675) smarcc1b (ENSSGRG00000008682) ENSSGRG00000008925 ENSSGRG00000008928 #8 ENSSGRG00000008929 TRIL (ENSSGRG00000008930) CREB5 (ENSSGRG00000008932) #11 jazf1a (ENSSGRG00000008933) #12 tax1bp1a (ENSSGRG00000008936) #13 hibadha (ENSSGRG00000008938) EVX1 (ENSSGRG00000008971) #15 hoxa13a (ENSSGRG00000008973) hoxa11a (ENSSGRG00000008974) #17 ENSSGRG00000008975 hoxa5a (ENSSGRG00000008976) #22 HOXA4 (ENSSGRG00000008977) #23 ENSSGRG00000008978 #23 hoxa3a (ENSSGRG00000008979) #24 ENSSGRG00000008980 hoxa1a (ENSSGRG00000008986) #26 snx10a (ENSSGRG00000008990) #29 cbx3a (ENSSGRG00000009001) #30 nfe2l3 (ENSSGRG00000009002) #32 npvf (ENSSGRG00000009003) #33 ENSSGRG00000009004 osbpl3a (ENSSGRG00000009007) #36 Cyprininae ANCESTRAL SPECIES 75 ENSGT00940000156347.e.d ENSGT00530000063688.b.ob.b ENSGT00390000010145.c.b.o ENSGT00940000157248.c.b ENSGT00940000160267.b #8 ENSGT00990000205799 ENSGT00940000161975.d ENSGT00940000156420.a.b.a.a #11 ENSGT00390000003635.g.a #12 ENSGT00950000183025.b.a.ab.e.a #13 ENSGT00940000165581.g.a.b ENSGT00940000159854.d #15 ENSGT00940000164071.b.b.c ENSGT00940000158311.a.c #17 ENSGT00940000166648.c.b ENSGT00940000159894.p #22 ENSGT00940000158988.a.a.g #23 ENSGT00940000159522.i.a #24 ENSGT00940000157315.kc.d #26 ENSGT00940000156007.k.b #29 ENSGT00940000153305.j #30 ENSGT00950000182892.a.b.b.k #32 ENSGT00390000003271.d #33 ENSGT00940000157883.a.b.f.d ENSGT00940000155957.b.c #36 ENSGT00940000155880.f.f #37 ENSGT00940000155348.A.i ENSGT00940000156475.f.c ENSGT00770000120611.B.g ENSGT00770000120611.B.h ENSGT00940000153470.a.a.a.b Goldfish MODERN SPECIES 10 cspg5b (ENSCARG00000018860) smarcc1b (ENSCARG00000018870) ENSCARG00000018923 ENSCARG00000018950 #8 ENSCARG00000018960 ENSCARG00000018964 TRIL (ENSCARG00000018966) CREB5 (ENSCARG00000018969) #11 jazf1a (ENSCARG00000018973) #12 tax1bp1a (ENSCARG00000018982) #13 hibadha (ENSCARG00000018994) EVX1 (ENSCARG00000019009) #15 hoxa13a (ENSCARG00000019014) hoxa11a (ENSCARG00000019022) #17 ENSCARG00000019031 hoxa5a (ENSCARG00000019033) #22 hoxa3a (ENSCARG00000019037) #24 HOXA4 (ENSCARG00000019044) #23 ENSCARG00000019051 hoxa1a (ENSCARG00000019054) #26 snx10a (ENSCARG00000019061) #29 cbx3a (ENSCARG00000019073) #30 nfe2l3 (ENSCARG00000019112) #32 npvf (ENSCARG00000019116) #33 osbpl3a (ENSCARG00000019140) #36 ENSCARG00000019190 #37 ENSCARG00000019221 npy (ENSCARG00000019590) fam221a (ENSCARG00000019601) tra2a (ENSCARG00000019610) igf2bp3 (ENSCARG00000019683) Cyprininae_a ANCESTRAL SPECIES 1 ENSGT00940000156347.e.d ENSGT00530000063688.b.ob.b ENSGT00390000010145.c.b.o ENSGT00940000157248.c.b ENSGT00940000160267.b #8 ENSGT00990000205799 ENSGT00940000161975.d ENSGT00940000156420.a.b.a.a #11 ENSGT00390000003635.g.a #12 ENSGT00950000183025.b.a.ab.e.a #13 ENSGT00940000165581.g.a.b ENSGT00940000159854.d #15 ENSGT00940000164071.b.b.c ENSGT00940000158311.a.c #17 ENSGT00940000166648.c.b ENSGT00940000159894.p #22 ENSGT00940000158988.a.a.g #23 ENSGT00940000159522.i.a #24 ENSGT00940000157315.kc.d #26 ENSGT00940000156007.k.b #29 ENSGT00940000153305.j #30 ENSGT00950000182892.a.b.b.k #32 ENSGT00390000003271.d #33 ENSGT00940000157883.a.b.f.d ENSGT00940000155957.b.c #36 ENSGT00940000155880.f.f #37 ENSGT00940000155348.A.i ENSGT00940000156475.f.c ENSGT00770000120611.B.g ENSGT00770000120611.B.h ENSGT00940000153470.a.a.a.b Common carp reference MODERN SPECIES 12 smarcc1b (ENSCCRG00000019722) ENSCCRG00000053647 ENSCCRG00000019674 ENSCCRG00000068896 ENSCCRG00000080948 ENSCCRG00000027292 #8 ENSCCRG00000035725 CREB5 (ENSCCRG00000035718) #11 TRIL (ENSCCRG00000035722) jazf1a (ENSCCRG00000064336) #12 tax1bp1a (ENSCCRG00000053573) #13 hibadha (ENSCCRG00000075974) EVX1 (ENSCCRG00000019577) #15 HOXA4 (ENSCCRG00000019562) #23 ENSCCRG00000053867 hoxa5a (ENSCCRG00000063560) #22 HOXA3 (ENSCCRG00000063135) #24 hoxa1a (ENSCCRG00000019567) #26 snx10a (ENSCCRG00000063489) #29 CBX3 (ENSCCRG00000080967) #30 nfe2l3 (ENSCCRG00000071197) #32 npvf (ENSCCRG00000074653) #33 ENSCCRG00000037612 OSBPL3 (ENSCCRG00000010797) #36 ENSCCRG00000038010 #37 ENSCCRG00000038004 fam221a (ENSCCRG00000037999) tra2a (ENSCCRG00000062498) igf2bp3 (ENSCCRG00000030227) GPNMB (ENSCCRG00000023873) oxnad1 (ENSCCRG00000023876) Golden-line barbel MODERN SPECIES 148 ptpn23b (ENSSGRG00000050134) cspg5b (ENSSGRG00000050137) smarcc1b (ENSSGRG00000050153) ENSSGRG00000050427 ASTE1 (ENSSGRG00000050428) ENSSGRG00000050429 ENSSGRG00000050430 TRIL (ENSSGRG00000050432) CREB5 (ENSSGRG00000050433) #11 jazf1a (ENSSGRG00000050436) #12 tax1bp1a (ENSSGRG00000050437) #13 hibadha (ENSSGRG00000050438) EVX1 (ENSSGRG00000050444) #15 hoxa13a (ENSSGRG00000050446) hoxa11a (ENSSGRG00000050447) #17 hoxa5a (ENSSGRG00000050450) #22 HOXA4 (ENSSGRG00000050451) #23 hoxa3a (ENSSGRG00000050452) #24 hoxa1a (ENSSGRG00000050454) #26 snx10a (ENSSGRG00000050456) #29 cbx3a (ENSSGRG00000050459) #30 nfe2l3 (ENSSGRG00000050469) #32 osbpl3a (ENSSGRG00000050470) #36 GSDME (ENSSGRG00000050472) #37 ENSSGRG00000050477 npy (ENSSGRG00000050533) ccdc126 (ENSSGRG00000050534) fam221a (ENSSGRG00000050535) tra2a (ENSSGRG00000050536) igf2bp3 (ENSSGRG00000050552) ENSSGRG00000051380 Zebrafish MODERN SPECIES 10 ENSDARG00000074216 ENSDARG00000036245 #8 TRIL (ENSDARG00000100791) CREB5 (ENSDARG00000099002) #11 jazf1a (ENSDARG00000102551) #12 tax1bp1a (ENSDARG00000098288) #13 ENSDARG00000116588 hibadha (ENSDARG00000102906) evx1 (ENSDARG00000100087) #15 EVX1 (ENSDARG00000099365) #15 hoxa13a (ENSDARG00000100312) hoxa11a (ENSDARG00000104162) #17 hoxa9a (ENSDARG00000105013) ENSDARG00000100358 hoxa3a (ENSDARG00000103862) #24 hoxa5a (ENSDARG00000102501) #22 hoxa1a (ENSDARG00000104307) #26 npvf (ENSDARG00000036227) #33 ENSDARG00000095636 osbpl3a (ENSDARG00000033251) #36 ENSDARG00000086762 #37 pals2b (ENSDARG00000029761) npy (ENSDARG00000036222) ENSDARG00000074359 fam221a (ENSDARG00000027599) ccdc126 (ENSDARG00000062695) tra2a (ENSDARG00000007863) ENSDARG00000096834 igf2bp3 (ENSDARG00000010266) GPNMB (ENSDARG00000062688) oxnad1 (ENSDARG00000062664) Osteoglossiformes ANCESTRAL SPECIES 9 ENSGT00940000161975 ENSGT00940000156420.a.b #11 ENSGT00390000003635.h.b #12 ENSGT00950000183025.b.a.ab #13 ENSGT00940000155255.eb #14 ENSGT00940000159854 #15 ENSGT00940000164071.b.b ENSGT00940000158311.a #17 ENSGT00940000163268.d.a.e ENSGT00940000161013 #20 ENSGT00940000159894 #22 ENSGT00940000158988.a.a #23 ENSGT00940000155029.c.a.c ENSGT00940000157315 #26 ENSGT00940000156007.k #29 ENSGT00940000153305 #30 ENSGT00950000182892.a.b.b #32 ENSGT01030000234992 ENSGT00940000155957.b #36 ENSGT00940000155880.f #37 ENSGT00940000155348.A ENSGT00940000156475.f ENSGT00770000120611.B ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000154957.B P. kingsleyae MODERN SPECIES 161 ENSPKIG00000000042 ENSPKIG00000000045 #8 ENSPKIG00000000055 ENSPKIG00000000065 #9 TRIL (ENSPKIG00000000080) CREB5 (ENSPKIG00000000103) #11 JAZF1 (ENSPKIG00000000128) #12 tax1bp1a (ENSPKIG00000000144) #13 hibadhb (ENSPKIG00000000157) #14 evx1 (ENSPKIG00000000173) #15 hoxa13a (ENSPKIG00000000189) hoxa11a (ENSPKIG00000000203) #17 hoxa10b (ENSPKIG00000000211) hoxa9a (ENSPKIG00000000219) HOXA7 (ENSPKIG00000000233) #20 hoxa5a (ENSPKIG00000000291) #22 hoxa3a (ENSPKIG00000000306) #24 HOXA4 (ENSPKIG00000000314) #23 hoxa2b (ENSPKIG00000000322) hoxa1a (ENSPKIG00000000337) #26 snx10a (ENSPKIG00000000346) #29 cbx3a (ENSPKIG00000000364) #30 nfe2l3 (ENSPKIG00000000374) #32 Asian bonytongue MODERN SPECIES 15 ENSSFOG00015013224 ENSSFOG00015013229 #8 ENSSFOG00015013247 ENSSFOG00015013274 #9 TRIL (ENSSFOG00015013322) CREB5 (ENSSFOG00015013343) #11 JAZF1 (ENSSFOG00015021725) #12 tax1bp1a (ENSSFOG00015013406) #13 hibadhb (ENSSFOG00015030994) #14 evx1 (ENSSFOG00015030473) #15 hoxa13a (ENSSFOG00015013482) hoxa11a (ENSSFOG00015013545) #17 hoxa10b (ENSSFOG00015013555) hoxa9a (ENSSFOG00015013564) HOXA7 (ENSSFOG00015031379) #20 hoxa5a (ENSSFOG00015029712) #22 HOXA4 (ENSSFOG00015013621) #23 hoxa3a (ENSSFOG00015013599) #24 hoxa2b (ENSSFOG00015027827) hoxa1a (ENSSFOG00015013645) #26 snx10a (ENSSFOG00015024663) #29 cbx3a (ENSSFOG00015028486) #30 ENSSFOG00015013727 #30 ENSSFOG00015013760 osbpl3a (ENSSFOG00015013787) #36 GSDME (ENSSFOG00015030956) #37 ENSSFOG00015013869 npy (ENSSFOG00015013942) fam221a (ENSSFOG00015013956) ccdc126 (ENSSFOG00015013990) ENSSFOG00015014036 Spotted gar MODERN SPECIES 649 CREB5 (ENSLOCG00000011905) #11 jazf1a (ENSLOCG00000011888) #12 tax1bp1b (ENSLOCG00000011874) #13 hibadhb (ENSLOCG00000011866) #14 evx1 (ENSLOCG00000011857) #15 hoxa13b (ENSLOCG00000011842) hoxa11a (ENSLOCG00000011836) #17 hoxa10b (ENSLOCG00000011830) ENSLOCG00000011824 hoxa5a (ENSLOCG00000011819) #22 hoxa3a (ENSLOCG00000011801) #24 hoxa1a (ENSLOCG00000011798) #26 skap2 (ENSLOCG00000011789) #28 snx10b (ENSLOCG00000011778) #29 CBX3 (ENSLOCG00000011762) #30 cbx3a (ENSLOCG00000011747) #30 nfe2l3 (ENSLOCG00000011733) #32 ENSLOCG00000011716 C7orf31 (ENSLOCG00000011709) #34 osbpl3a (ENSLOCG00000011683) #36 ENSLOCG00000011677 #37 ENSLOCG00000011661 npy (ENSLOCG00000011653) STK31 (ENSLOCG00000011643) fam221a (ENSLOCG00000011634) Reedfish MODERN SPECIES 4 ENSECRG00000021076 ENSECRG00000021118 #9 CHN2 (ENSECRG00000021158) #9 cpvl (ENSECRG00000021266) #10 ENSECRG00000021534 TRIL (ENSECRG00000021548) CREB5 (ENSECRG00000021562) #11 jazf1a (ENSECRG00000021586) #12 TAX1BP1 (ENSECRG00000021604) #13 hibadhb (ENSECRG00000021631) #14 evx1 (ENSECRG00000021649) #15 hoxa13b (ENSECRG00000021658) hoxa11a (ENSECRG00000021670) #17 ENSECRG00000021680 hoxa9a (ENSECRG00000021687) hoxa5a (ENSECRG00000021709) #22 HOXA4 (ENSECRG00000021734) ##23 hoxa3a (ENSECRG00000021756) #24 hoxa2b (ENSECRG00000021769) hoxa1a (ENSECRG00000021786) #26 skap2 (ENSECRG00000021805) #28 snx10b (ENSECRG00000021839) #29 CBX3 (ENSECRG00000021859) #30 cbx3a (ENSECRG00000021891) #30 ENSECRG00000021926 #32 ENSECRG00000021933 #32 ENSECRG00000021937 C7orf31 (ENSECRG00000021970) #34 osbpl3a (ENSECRG00000022016) #36 GSDME (ENSECRG00000022034) #37 pals2a (ENSECRG00000022043) Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1564 CHN2 (ENSCMIG00000006752) #9 cpvl (ENSCMIG00000006765) #10 TRIL (ENSCMIG00000006779) CREB5 (ENSCMIG00000006781) #11 ENSCMIG00000006783 #11 JAZF1 (ENSCMIG00000006787) #12 tax1bp1b (ENSCMIG00000006795) #13 hibadhb (ENSCMIG00000006809) #14 ENSCMIG00000006816 evx1 (ENSCMIG00000006819) #15 hoxa13b (ENSCMIG00000006824) hoxa10b (ENSCMIG00000006830) ENSCMIG00000006832 HOXA7 (ENSCMIG00000006836) #20 HOXA6 (ENSCMIG00000006837) #21 hoxa5a (ENSCMIG00000006838) #22 ENSCMIG00000006839 ##23 hoxa3a (ENSCMIG00000006840) #24 hoxa2b (ENSCMIG00000006841) hoxa1a (ENSCMIG00000006844) #26 skap2 (ENSCMIG00000006845) #28 snx10a (ENSCMIG00000006847) #29 cbx3a (ENSCMIG00000006848) #30 ENSCMIG00000006852 #31 ENSCMIG00000006861 #32 ENSCMIG00000006867 ENSCMIG00000006893 #34 cycsb (ENSCMIG00000006898) OSBPL3 (ENSCMIG00000007003) #36 gsdme (ENSCMIG00000007253) #37 BCL2 (ENSCMIG00000007255) Elephant shark MODERN SPECIES 1499 wipf1a (ENSCMIG00000012690) chrna1 (ENSCMIG00000012709) ENSCMIG00000012784 ##9 ENSCMIG00000012801 ATF2 (ENSCMIG00000012818) ENSCMIG00000012857 #12 lnpk (ENSCMIG00000012861) evx2 (ENSCMIG00000012866) ENSCMIG00000012868 HOXD13 (ENSCMIG00000012869) hoxd12a (ENSCMIG00000012873) hoxd11a (ENSCMIG00000012876) hoxd10a (ENSCMIG00000012878) ENSCMIG00000012881 hoxd8 (ENSCMIG00000012886) ENSCMIG00000012888 #22 hoxd3a (ENSCMIG00000012890) hoxd4a (ENSCMIG00000012892) ENSCMIG00000012893 ENSCMIG00000012894 #26 mtx2 (ENSCMIG00000012899) ENSCMIG00000012946 nfe2l2a (ENSCMIG00000012953) ##32 agps (ENSCMIG00000013025) ENSCMIG00000013236 cycsb (ENSCMIG00000013243) rbm45 (ENSCMIG00000013247) OSBPL6 (ENSCMIG00000013345) ENSCMIG00000013753 PJVK (ENSCMIG00000013757) fkbp7 (ENSCMIG00000013760)