Euteleostomi	ANCESTRAL SPECIES	114	ENSGT00390000016889	ENSGT00940000155199	ENSGT00940000154563	ENSGT00940000160784	ENSGT00940000160431	ENSGT00940000154102.a	ENSGT01050000244888.a.b	ENSGT00390000011228.a	ENSGT00940000162196	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a	ENSGT00940000159650	ENSGT00940000156194 #35	ENSGT00990000206767	ENSGT00940000157493	ENSGT00940000153792.B
Sarcopterygii	ANCESTRAL SPECIES	364												ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a	ENSGT00940000161251	ENSGT00390000000020.a
Tetrapoda	ANCESTRAL SPECIES	98	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767 #9	ENSGT00940000159117	ENSGT00940000177211	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a	ENSGT00940000161251	ENSGT00390000000020.a
Amniota	ANCESTRAL SPECIES	26	ENSGT00390000000705 #8	ENSGT00390000008767 #9	ENSGT00940000159117	ENSGT00940000177211	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00440000033504.C	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695	ENSGT00940000169569	ENSGT00940000153544.a #30
Mammalia	ANCESTRAL SPECIES	41	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767 #9	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472	ENSGT00730000111479	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000153189.C #36	ENSGT00940000156194 #35	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29
Theria	ANCESTRAL SPECIES	4	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a #9	ENSGT00390000008767.b ##9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000163908	ENSGT00390000000020.a	ENSGT00940000161251
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00390000008767.b ##9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000163908	ENSGT00940000162458
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00440000033504.C	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00440000033504.C	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Primates	ANCESTRAL SPECIES	5	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000154045.a.j #21	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000154045.a.j #21	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00530000063255.B.l #32	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.a #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000154045.a.j #21	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.kb #31	ENSGT00530000063255.B.l #32	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Hominidae	ANCESTRAL SPECIES	5	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00950000183198.c.a.b.b	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.a #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000154045.a.j #21	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.kb #31	ENSGT00530000063255.B.l #32	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00950000183198.c.a.b.b	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.a #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000154045.a.j #21	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.kb #31	ENSGT00530000063255.B.l #32	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00950000183198.c.a.b.b	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.a #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000154045.a.j #21	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.kb #31	ENSGT00530000063255.B.l #32	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Pan	ANCESTRAL SPECIES	5	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00950000183198.c.a.b.b	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.a #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000154045.a.j #21	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.kb #31	ENSGT00530000063255.B.l #32	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Bonobo	MODERN SPECIES	19	PPARD (ENSPPAG00000038368) #7	ENSPPAG00000034967 #8	ENSPPAG00000011712 #9	TEAD3 (ENSPPAG00000015570) #10	TULP1 (ENSPPAG00000030610) #11	FKBP5 (ENSPPAG00000040163) #12	ARMC12 (ENSPPAG00000005870) #13	ENSPPAG00000031587 #14	CLPSL1 (ENSPPAG00000029511) #15	CLPS (ENSPPAG00000026942) #16	LHFPL5 (ENSPPAG00000030696) #17	SRPK1 (ENSPPAG00000029829) #18	SLC26A8 (ENSPPAG00000039258) #19	MAPK14 (ENSPPAG00000041878) #20	ENSPPAG00000042344 #21	MAPK13 (ENSPPAG00000037868) #22	BRPF3 (ENSPPAG00000040566) #23	PNPLA1 (ENSPPAG00000029022) #24	BNIP5 (ENSPPAG00000033922) #25	ENSPPAG00000043525 #26	ETV7 (ENSPPAG00000019920) #27	PXT1 (ENSPPAG00000036302) #28	KCTD20 (ENSPPAG00000031112) #29	STK38 (ENSPPAG00000039275) #30	SRSF3 (ENSPPAG00000037453) #31	ENSPPAG00000037939 #32	CDKN1A (ENSPPAG00000037644) #33	RAB44 (ENSPPAG00000043639) #34	CPNE5 (ENSPPAG00000007557) #35	PPIL1 (ENSPPAG00000033612) #36	C6orf89 (ENSPPAG00000042318) #37
Chimpanzee	MODERN SPECIES	19	FANCE (ENSPTRG00000018084) #8	RPL10A (ENSPTRG00000018085) #9	TEAD3 (ENSPTRG00000018086) #10	TULP1 (ENSPTRG00000018087) #11	ENSPTRG00000049415	FKBP5 (ENSPTRG00000018088) #12	ARMC12 (ENSPTRG00000018089) #13	CLPSL2 (ENSPTRG00000024123) #14	CLPSL1 (ENSPTRG00000029713) #15	CLPS (ENSPTRG00000018092) #16	LHFPL5 (ENSPTRG00000049082) #17	SRPK1 (ENSPTRG00000018094) #18	SLC26A8 (ENSPTRG00000018095) #19	MAPK14 (ENSPTRG00000018097) #20	ENSPTRG00000047298 #21	MAPK13 (ENSPTRG00000018098) #22	BRPF3 (ENSPTRG00000024347) #23	PNPLA1 (ENSPTRG00000018100) #24	BNIP5 (ENSPTRG00000018101) #25	ENSPTRG00000052831 #26	ETV7 (ENSPTRG00000018102) #27	PXT1 (ENSPTRG00000018103) #28	KCTD20 (ENSPTRG00000018104) #29	STK38 (ENSPTRG00000018105) #30	SRSF3 (ENSPTRG00000018106) #31	ENSPTRG00000050938 #32	CDKN1A (ENSPTRG00000018107) #33	RAB44 (ENSPTRG00000045813) #34	CPNE5 (ENSPTRG00000018110) #35	PPIL1 (ENSPTRG00000018111) #36	C6H6orf89 (ENSPTRG00000024272) #37
Human	MODERN SPECIES	18	DEF6 (ENSG00000023892)	PPARD (ENSG00000112033) #7	FANCE (ENSG00000112039) #8	RPL10A (ENSG00000198755) #9	TEAD3 (ENSG00000007866) #10	TULP1 (ENSG00000112041) #11	FKBP5 (ENSG00000096060) #12	ARMC12 (ENSG00000157343) #13	CLPSL2 (ENSG00000196748) #14	CLPSL1 (ENSG00000204140) #15	CLPS (ENSG00000137392) #16	LHFPL5 (ENSG00000197753) #17	SRPK1 (ENSG00000096063) #18	SLC26A8 (ENSG00000112053) #19	MAPK14 (ENSG00000112062) #20	MAPK13 (ENSG00000156711) #22	BRPF3 (ENSG00000096070) #23	PNPLA1 (ENSG00000180316) #24	BNIP5 (ENSG00000189325) #25	ETV7 (ENSG00000010030) #27	PXT1 (ENSG00000179165) #28	KCTD20 (ENSG00000112078) #29	STK38 (ENSG00000112079) #30	SRSF3 (ENSG00000112081) #31	CDKN1A (ENSG00000124762) #33	RAB44 (ENSG00000255587) #34	CPNE5 (ENSG00000124772) #35	PPIL1 (ENSG00000137168) #36	C6orf89 (ENSG00000198663) #37	PI16 (ENSG00000164530)	MTCH1 (ENSG00000137409)
Gorilla	MODERN SPECIES	19	PPARD (ENSGGOG00000016781) #7	RPL10A (ENSGGOG00000028140) #9	TEAD3 (ENSGGOG00000001847) #10	TULP1 (ENSGGOG00000001850) #11	ENSGGOG00000028262	FKBP5 (ENSGGOG00000005367) #12	ARMC12 (ENSGGOG00000015515) #13	ENSGGOG00000007944 #14	CLPSL1 (ENSGGOG00000007952) #15	CLPS (ENSGGOG00000005311) #16	LHFPL5 (ENSGGOG00000012128) #17	SRPK1 (ENSGGOG00000013566) #18	SLC26A8 (ENSGGOG00000013580) #19	MAPK14 (ENSGGOG00000040633) #20	ENSGGOG00000040328 #21	MAPK13 (ENSGGOG00000003947) #22	BRPF3 (ENSGGOG00000013411) #23	PNPLA1 (ENSGGOG00000007014) #24	BNIP5 (ENSGGOG00000007022) #25	ENSGGOG00000042754 #26	ETV7 (ENSGGOG00000002074) #27	PXT1 (ENSGGOG00000004176) #28	KCTD20 (ENSGGOG00000003468) #29	STK38 (ENSGGOG00000008755) #30	ENSGGOG00000017186 #31	ENSGGOG00000025194 #32	CDKN1A (ENSGGOG00000014701) #33	RAB44 (ENSGGOG00000005759) #34	CPNE5 (ENSGGOG00000005763) #35	PPIL1 (ENSGGOG00000027071) #36	C6orf89 (ENSGGOG00000013941) #37
Orangutan	MODERN SPECIES	19	PPARD (ENSPPYG00000016527) #7	ENSPPYG00000016528 #8	RPL10A (ENSPPYG00000016529) #9	TEAD3 (ENSPPYG00000016530) #10	TULP1 (ENSPPYG00000016531) #11	ENSPPYG00000037354	FKBP5 (ENSPPYG00000016532) #12	ARMC12 (ENSPPYG00000016533) #13	ENSPPYG00000016534 #14	CLPSL1 (ENSPPYG00000016535) #15	CLPS (ENSPPYG00000016536) #16	LHFPL5 (ENSPPYG00000040753) #17	SRPK1 (ENSPPYG00000016537) #18	SLC26A8 (ENSPPYG00000016538) #19	MAPK14 (ENSPPYG00000016539) #20	MAPK13 (ENSPPYG00000016540) #22	BRPF3 (ENSPPYG00000016541) #23	PNPLA1 (ENSPPYG00000016542) #24	BNIP5 (ENSPPYG00000016543) #25	ETV7 (ENSPPYG00000016544) #27	PXT1 (ENSPPYG00000040789) #28	KCTD20 (ENSPPYG00000016546) #29	STK38 (ENSPPYG00000016547) #30	SRSF3 (ENSPPYG00000016548) #31	CDKN1A (ENSPPYG00000016549) #33	RAB44 (ENSPPYG00000037363) #34	CPNE5 (ENSPPYG00000016553) #35	PPIL1 (ENSPPYG00000016554) #36	C6H6orf89 (ENSPPYG00000016555) #37	PI16 (ENSPPYG00000016556)	MTCH1 (ENSPPYG00000016557)
Gibbon	MODERN SPECIES	10	DEF6 (ENSNLEG00000008604)	PPARD (ENSNLEG00000008621) #7	ENSNLEG00000008643 #8	RPL10A (ENSNLEG00000008650) #9	TEAD3 (ENSNLEG00000008666) #10	ENSNLEG00000008709 #11	FKBP5 (ENSNLEG00000008715) #12	ARMC12 (ENSNLEG00000008757) #13	CLPSL2 (ENSNLEG00000008771) #14	CLPSL1 (ENSNLEG00000032058) #15	CLPS (ENSNLEG00000008783) #16	SRPK1 (ENSNLEG00000008794) #18	SLC26A8 (ENSNLEG00000008819) #19	MAPK14 (ENSNLEG00000036033) #20	ENSNLEG00000036157 #21	MAPK13 (ENSNLEG00000008913) #22	BRPF3 (ENSNLEG00000008999) #23	ENSNLEG00000009037 #24	BNIP5 (ENSNLEG00000009064) #25	ENSNLEG00000011953	LRR1 (ENSNLEG00000011957)	ENSNLEG00000027347	DNAAF2 (ENSNLEG00000011975)	POLE2 (ENSNLEG00000011982)	KLHDC1 (ENSNLEG00000012044)	KLHDC2 (ENSNLEG00000012047)	NEMF (ENSNLEG00000012070)	ENSNLEG00000030067	ENSNLEG00000030933	ENSNLEG00000012102	VCPKMT (ENSNLEG00000012103)
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00530000063255.B.l #32	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Rhinopithecus	ANCESTRAL SPECIES	31	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b.b ##18	ENSGT00940000155264.n ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Golden snub-nosed monkey	MODERN SPECIES	2750	PPARD (ENSRROG00000029175) #7	FANCE (ENSRROG00000032591) #8	RPL10A (ENSRROG00000028381) #9	TEAD3 (ENSRROG00000043776) #10	TULP1 (ENSRROG00000029720) #11	FKBP5 (ENSRROG00000043767) #12	ARMC12 (ENSRROG00000041434) #13	ENSRROG00000036180 #14	CLPSL1 (ENSRROG00000029400) #15	CLPS (ENSRROG00000033788) #16	LHFPL5 (ENSRROG00000037918) #17	ENSRROG00000029933 ##18	ENSRROG00000045645	SLC26A8 (ENSRROG00000031983) #19	MAPK14 (ENSRROG00000036549) #20	MAPK13 (ENSRROG00000042662) #22	BRPF3 (ENSRROG00000041528) #23	PNPLA1 (ENSRROG00000032219) #24	BNIP5 (ENSRROG00000039829) #25	ETV7 (ENSRROG00000032976) #27	PXT1 (ENSRROG00000039408) #28	KCTD20 (ENSRROG00000042618) #29	STK38 (ENSRROG00000034474) #30	SRSF3 (ENSRROG00000044486) #31	CDKN1A (ENSRROG00000037461) #33	RAB44 (ENSRROG00000037377) #34	CPNE5 (ENSRROG00000032021) #35	PPIL1 (ENSRROG00000045257) #36	C6orf89 (ENSRROG00000041913) #37	PI16 (ENSRROG00000032859)	MTCH1 (ENSRROG00000043247)
Black snub-nosed monkey	MODERN SPECIES	306		PPARD (ENSRBIG00000041587) #7	FANCE (ENSRBIG00000044214) #8	RPL10A (ENSRBIG00000037569) #9	TEAD3 (ENSRBIG00000040718) #10	TULP1 (ENSRBIG00000041437) #11	FKBP5 (ENSRBIG00000018161) #12	ARMC12 (ENSRBIG00000029208) #13	ENSRBIG00000030153 #14	CLPSL1 (ENSRBIG00000039457) #15	CLPS (ENSRBIG00000028942) #16	LHFPL5 (ENSRBIG00000025941) #17	ENSRBIG00000036682 ##18	SLC26A8 (ENSRBIG00000036976) #19	MAPK14 (ENSRBIG00000037818) #20	MAPK13 (ENSRBIG00000040253) #22	BRPF3 (ENSRBIG00000029496) #23	PNPLA1 (ENSRBIG00000032695) #24	BNIP5 (ENSRBIG00000044492) #25	ETV7 (ENSRBIG00000041237) #27	PXT1 (ENSRBIG00000021930) #28	KCTD20 (ENSRBIG00000028139) #29	STK38 (ENSRBIG00000036049) #30	SRSF3 (ENSRBIG00000036836) #31	CDKN1A (ENSRBIG00000028286) #33	RAB44 (ENSRBIG00000018383) #34	CPNE5 (ENSRBIG00000038772) #35	PPIL1 (ENSRBIG00000024907) #36	C6orf89 (ENSRBIG00000032494) #37	PI16 (ENSRBIG00000039198)	MTCH1 (ENSRBIG00000040133)
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.nb #31	ENSGT00530000063255.B.l #32	ENSGT00910000144115.a.mb.b #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36
Vervet Monkey	MODERN SPECIES	8	PPARD (ENSCSAG00000009967) #7	FANCE (ENSCSAG00000009968) #8	ENSCSAG00000009972 #9	TEAD3 (ENSCSAG00000009977) #10	TULP1 (ENSCSAG00000009987) #11	FKBP5 (ENSCSAG00000009994) #12	ARMC12 (ENSCSAG00000010008) #13	CLPSL2 (ENSCSAG00000010013) #14	CLPSL1 (ENSCSAG00000010016) #15	CLPS (ENSCSAG00000010019) #16	LHFPL5 (ENSCSAG00000010022) #17	ENSCSAG00000019304	ENSCSAG00000010090 ##18	SLC26A8 (ENSCSAG00000010164) #19	MAPK14 (ENSCSAG00000010178) #20	MAPK13 (ENSCSAG00000010185) #22	BRPF3 (ENSCSAG00000010191) #23	PNPLA1 (ENSCSAG00000010212) #24	BNIP5 (ENSCSAG00000010228) #25	ETV7 (ENSCSAG00000010241) #27	PXT1 (ENSCSAG00000010266) #28	KCTD20 (ENSCSAG00000010275) #29	STK38 (ENSCSAG00000010286) #30	SRSF3 (ENSCSAG00000010291) #31	CDKN1A (ENSCSAG00000010296) #33	ENSCSAG00000010304 #34	CPNE5 (ENSCSAG00000010340) #35	PPIL1 (ENSCSAG00000010353) #36	C6orf89 (ENSCSAG00000010357) #37	PI16 (ENSCSAG00000010367)	MTCH1 (ENSCSAG00000010374)
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.mb.a #31	ENSGT00910000144115.a.nb #31	ENSGT00530000063255.B.l #32	ENSGT00910000144115.a.mb.b #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35
Macaca	ANCESTRAL SPECIES	9	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.mb.a #31	ENSGT00530000063255.B.l #32	ENSGT00910000144115.a.mb.b #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C.`b.a #36
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00910000147445 #26	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.mb.b #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT01100000263539.b.b.b.b.b.a.b.a.a.b.a.a.a.b	ENSGT00940000156194 #35	ENSGT00940000153189.C.`b.a #36	ENSGT00390000014270 #37	ENSGT00940000162458
Rhesus	MODERN SPECIES	14	ZNF76 (ENSMMUG00000023559)	DEF6 (ENSMMUG00000023560)	PPARD (ENSMMUG00000015904) #7	FANCE (ENSMMUG00000015906) #8	RPL10A (ENSMMUG00000015907) #9	TEAD3 (ENSMMUG00000015909) #10	TULP1 (ENSMMUG00000005064) #11	FKBP5 (ENSMMUG00000011520) #12	ARMC12 (ENSMMUG00000059809) #13	CLPSL1 (ENSMMUG00000015383) #15	CLPS (ENSMMUG00000015384) #16	LHFPL5 (ENSMMUG00000063626) #17	SRPK1 (ENSMMUG00000018557) ##18	SLC26A8 (ENSMMUG00000008442) #19	MAPK14 (ENSMMUG00000008444) #20	MAPK13 (ENSMMUG00000005903) #22	BRPF3 (ENSMMUG00000015416) #23	PNPLA1 (ENSMMUG00000000685) #24	BNIP5 (ENSMMUG00000051919) #25	ETV7 (ENSMMUG00000000687) #27	KCTD20 (ENSMMUG00000014508) #29	STK38 (ENSMMUG00000020558) #30	ENSMMUG00000060923 #31	CDKN1A (ENSMMUG00000055964) #33	RAB44 (ENSMMUG00000003214) #34	ENSMMUG00000051501	ENSMMUG00000060681	CPNE5 (ENSMMUG00000005854) #35	PPIL1 (ENSMMUG00000056730) #36	C4H6orf89 (ENSMMUG00000005004) #37	PI16 (ENSMMUG00000021977)
Crab-eating macaque	MODERN SPECIES	14	FANCE (ENSMFAG00000029851) #8	ENSMFAG00000040600 #9	TEAD3 (ENSMFAG00000032267) #10	TULP1 (ENSMFAG00000002441) #11	ENSMFAG00000058661	ENSMFAG00000053351	ENSMFAG00000062629	FKBP5 (ENSMFAG00000030158) #12	ARMC12 (ENSMFAG00000038125) #13	ENSMFAG00000039538 #15	LHFPL5 (ENSMFAG00000003905) #17	ENSMFAG00000033486 ##18	SLC26A8 (ENSMFAG00000031229) #19	ENSMFAG00000037865 #20	ENSMFAG00000059871 #23	MAPK13 (ENSMFAG00000045766) #22	ENSMFAG00000000567 #23	PNPLA1 (ENSMFAG00000040598) #24	ENSMFAG00000010228 #26	BNIP5 (ENSMFAG00000046079) #25	ETV7 (ENSMFAG00000036120) #27	KCTD20 (ENSMFAG00000033116) #29	STK38 (ENSMFAG00000000825) #30	SRSF3 (ENSMFAG00000057460) #31	CDKN1A (ENSMFAG00000001604) #33	RAB44 (ENSMFAG00000000117) #34	ENSMFAG00000054102	CPNE5 (ENSMFAG00000039268) #35	PPIL1 (ENSMFAG00000046250) #36	PI16 (ENSMFAG00000043273)	ENSMFAG00000042025
Pig-tailed macaque	MODERN SPECIES	528	ENSMNEG00000016032	PPARD (ENSMNEG00000042655) #7	FANCE (ENSMNEG00000038022) #8	RPL10A (ENSMNEG00000040176) #9	TEAD3 (ENSMNEG00000035473) #10	TULP1 (ENSMNEG00000038422) #11	FKBP5 (ENSMNEG00000044423) #12	ARMC12 (ENSMNEG00000041244) #13	CLPSL2 (ENSMNEG00000030010) #14	CLPSL1 (ENSMNEG00000030977) #15	CLPS (ENSMNEG00000032186) #16	LHFPL5 (ENSMNEG00000020411) #17	ENSMNEG00000035777 ##18	SLC26A8 (ENSMNEG00000037361) #19	MAPK14 (ENSMNEG00000045205) #20	MAPK13 (ENSMNEG00000040642) #22	BRPF3 (ENSMNEG00000044583) #23	PNPLA1 (ENSMNEG00000035187) #24	BNIP5 (ENSMNEG00000039042) #25	ENSMNEG00000028011 #26	ETV7 (ENSMNEG00000043750) #27	PXT1 (ENSMNEG00000045273) #28	KCTD20 (ENSMNEG00000041920) #29	STK38 (ENSMNEG00000029571) #30	SRSF3 (ENSMNEG00000038420) #31	ENSMNEG00000043837 #32	CDKN1A (ENSMNEG00000009631) #33	RAB44 (ENSMNEG00000007050) #34	CPNE5 (ENSMNEG00000033563) #35	ENSMNEG00000032074 #36	C6orf89 (ENSMNEG00000029104) #37
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.nb #31	ENSGT00530000063255.B.l #32	ENSGT00910000144115.a.mb.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C.`b.a #36
Olive baboon	MODERN SPECIES	16	FANCE (ENSPANG00000011154) #8	ENSPANG00000033155 #9	TEAD3 (ENSPANG00000018522) #10	TULP1 (ENSPANG00000010490) #11	FKBP5 (ENSPANG00000022113) #12	ENSPANG00000033276 #9	ARMC12 (ENSPANG00000022115) #13	CLPSL2 (ENSPANG00000050089) #14	CLPSL1 (ENSPANG00000047459) #15	CLPS (ENSPANG00000031296) #16	ENSPANG00000016189	LHFPL5 (ENSPANG00000046496) #17	ENSPANG00000000555 ##18	SLC26A8 (ENSPANG00000018480) #19	MAPK14 (ENSPANG00000018521) #20	MAPK13 (ENSPANG00000000909) #22	BRPF3 (ENSPANG00000000910) #23	PNPLA1 (ENSPANG00000016837) #24	BNIP5 (ENSPANG00000016838) #25	PXT1 (ENSPANG00000047657) #28	STK38 (ENSPANG00000015291) #30	KCTD20 (ENSPANG00000032159) #29	ENSPANG00000018768 #31	CDKN1A (ENSPANG00000041245) #33	RAB44 (ENSPANG00000006938) #34	CPNE5 (ENSPANG00000016476) #35	PPIL1 (ENSPANG00000016836) #36	C6orf89 (ENSPANG00000009718) #37	PI16 (ENSPANG00000021277)	MTCH1 (ENSPANG00000015101)	FGD2 (ENSPANG00000013431)
Cercopithecinae_d	ANCESTRAL SPECIES	13	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.m.b ##18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00910000147445 #26	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.nb #31	ENSGT00530000063255.B.l #32	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C.`b.a #36	ENSGT00390000014270 #37
Sooty mangabey	MODERN SPECIES	97	DEF6 (ENSCATG00000043169)	PPARD (ENSCATG00000035831) #7	FANCE (ENSCATG00000034718) #8	RPL10A (ENSCATG00000028533) #9	TEAD3 (ENSCATG00000042257) #10	TULP1 (ENSCATG00000043702) #11	FKBP5 (ENSCATG00000023586) #12	ARMC12 (ENSCATG00000041800) #13	CLPSL2 (ENSCATG00000031441) #14	CLPSL1 (ENSCATG00000036639) #15	CLPS (ENSCATG00000035897) #16	LHFPL5 (ENSCATG00000038851) #17	ENSCATG00000013152 ##18	SLC26A8 (ENSCATG00000031110) #19	MAPK14 (ENSCATG00000041963) #20	MAPK13 (ENSCATG00000020471) #22	BRPF3 (ENSCATG00000009910) #23	PNPLA1 (ENSCATG00000030587) #24	ENSCATG00000000512 #26	BNIP5 (ENSCATG00000044674) #25	ETV7 (ENSCATG00000044285) #27	PXT1 (ENSCATG00000034765) #28	KCTD20 (ENSCATG00000035921) #29	STK38 (ENSCATG00000032229) #30	SRSF3 (ENSCATG00000031850) #31	ENSCATG00000045144 #32	CDKN1A (ENSCATG00000016602) #33	RAB44 (ENSCATG00000039932) #34	CPNE5 (ENSCATG00000044198) #35	ENSCATG00000025677 #36	C6orf89 (ENSCATG00000043881) #37
Drill	MODERN SPECIES	941	PPARD (ENSMLEG00000039133) #7	FANCE (ENSMLEG00000029995) #8	RPL10A (ENSMLEG00000043266) #9	TEAD3 (ENSMLEG00000034526) #10	TULP1 (ENSMLEG00000036325) #11	FKBP5 (ENSMLEG00000042989) #12	ARMC12 (ENSMLEG00000037755) #13	CLPSL2 (ENSMLEG00000033601) #14	CLPSL1 (ENSMLEG00000041474) #15	CLPS (ENSMLEG00000011047) #16	ENSMLEG00000035814	LHFPL5 (ENSMLEG00000005788) #17	ENSMLEG00000041287 ##18	SLC26A8 (ENSMLEG00000032143) #19	MAPK14 (ENSMLEG00000043294) #20	MAPK13 (ENSMLEG00000040566) #22	BRPF3 (ENSMLEG00000024307) #23	PNPLA1 (ENSMLEG00000039225) #24	BNIP5 (ENSMLEG00000040000) #25	ENSMLEG00000022685 #26	ETV7 (ENSMLEG00000022479) #27	PXT1 (ENSMLEG00000010366) #28	KCTD20 (ENSMLEG00000031200) #29	STK38 (ENSMLEG00000030087) #30	SRSF3 (ENSMLEG00000041179) #31	ENSMLEG00000037519 #32	CDKN1A (ENSMLEG00000029996) #33	RAB44 (ENSMLEG00000034248) #34	CPNE5 (ENSMLEG00000040553) #35	PPIL1 (ENSMLEG00000043437) #36	C6orf89 (ENSMLEG00000033365) #37
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000154045.a.j #21	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.ob.b #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Mas night monkey	MODERN SPECIES	1007	PPARD (ENSANAG00000035545) #7	FANCE (ENSANAG00000027672) #8	RPL10A (ENSANAG00000034960) #9	TEAD3 (ENSANAG00000028458) #10	TULP1 (ENSANAG00000030313) #11	FKBP5 (ENSANAG00000030235) #12	ARMC12 (ENSANAG00000038298) #13	ENSANAG00000022845 #14	CLPSL1 (ENSANAG00000032715) #15	CLPS (ENSANAG00000033395) #16	LHFPL5 (ENSANAG00000035803) #17	SRPK1 (ENSANAG00000021431) #18	SLC26A8 (ENSANAG00000020781) #19	MAPK14 (ENSANAG00000038041) #20	ENSANAG00000032413 #21	MAPK13 (ENSANAG00000022181) #22	ENSANAG00000032262	BRPF3 (ENSANAG00000028984) #23	ENSANAG00000033497	PNPLA1 (ENSANAG00000034134) #24	BNIP5 (ENSANAG00000030362) #25	ETV7 (ENSANAG00000034107) #27	PXT1 (ENSANAG00000024752) #28	KCTD20 (ENSANAG00000026537) #29	ENSANAG00000024804 #30	ENSANAG00000033233 #31	CDKN1A (ENSANAG00000037294) #33	RAB44 (ENSANAG00000027844) #34
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.ob.b #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Marmoset	MODERN SPECIES	16	ENSCJAG00000075491	FANCE (ENSCJAG00000015623) #8	ENSCJAG00000042194 #9	TEAD3 (ENSCJAG00000015661) #10	TULP1 (ENSCJAG00000015713) #11	FKBP5 (ENSCJAG00000015725) #12	ARMC12 (ENSCJAG00000015745) #13	ENSCJAG00000015754 #14	CLPSL1 (ENSCJAG00000015756) #15	CLPS (ENSCJAG00000015758) #16	LHFPL5 (ENSCJAG00000060773) #17	SRPK1 (ENSCJAG00000015768) #18	SLC26A8 (ENSCJAG00000015817) #19	ENSCJAG00000074841	MAPK14 (ENSCJAG00000041232) #20	MAPK13 (ENSCJAG00000015899) #22	BRPF3 (ENSCJAG00000015955) #23	PNPLA1 (ENSCJAG00000015985) #24	BNIP5 (ENSCJAG00000016001) #25	ETV7 (ENSCJAG00000016011) #27	ENSCJAG00000043415	KCTD20 (ENSCJAG00000016033) #29	STK38 (ENSCJAG00000016045) #30	ENSCJAG00000016062 #31	CDKN1A (ENSCJAG00000045298) #33	RAB44 (ENSCJAG00000016070) #34	CPNE5 (ENSCJAG00000016086) #35	PPIL1 (ENSCJAG00000078975) #36	C6orf89 (ENSCJAG00000009979) #37	PI16 (ENSCJAG00000005267)	ENSCJAG00000005273
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.ob.b #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a.f.b
Capuchin	MODERN SPECIES	24	ENSCCAG00000033879	PPARD (ENSCCAG00000034461) #7	FANCE (ENSCCAG00000034008) #8	ENSCCAG00000032525 #9	TEAD3 (ENSCCAG00000019451) #10	TULP1 (ENSCCAG00000022908) #11	FKBP5 (ENSCCAG00000028002) #12	ARMC12 (ENSCCAG00000030593) #13	ENSCCAG00000023416 #14	CLPSL1 (ENSCCAG00000023306) #15	CLPS (ENSCCAG00000024059) #16	LHFPL5 (ENSCCAG00000024048) #17	SRPK1 (ENSCCAG00000032894) #18	SLC26A8 (ENSCCAG00000025640) #19	MAPK14 (ENSCCAG00000030908) #20	MAPK13 (ENSCCAG00000026106) #22	BRPF3 (ENSCCAG00000023864) #23	PNPLA1 (ENSCCAG00000034985) #24	BNIP5 (ENSCCAG00000037372) #25	ETV7 (ENSCCAG00000024241) #27	PXT1 (ENSCCAG00000033640) #28	KCTD20 (ENSCCAG00000032892) #29	STK38 (ENSCCAG00000035966) #30	ENSCCAG00000032244 #31	ENSCCAG00000032362	ENSCCAG00000035899	CDKN1A (ENSCCAG00000025008) #33	RAB44 (ENSCCAG00000028656) #34	CPNE5 (ENSCCAG00000025295) #35	PPIL1 (ENSCCAG00000036358) #36	C6orf89 (ENSCCAG00000022020) #37
Bolivian squirrel monkey	MODERN SPECIES	49	DEF6 (ENSSBOG00000027933)	PPARD (ENSSBOG00000027821) #7	FANCE (ENSSBOG00000023245) #8	RPL10A (ENSSBOG00000027649) #9	TEAD3 (ENSSBOG00000022623) #10	TULP1 (ENSSBOG00000033656) #11	FKBP5 (ENSSBOG00000026900) #12	ARMC12 (ENSSBOG00000022270) #13	ENSSBOG00000027052 #14	CLPSL1 (ENSSBOG00000019532) #15	CLPS (ENSSBOG00000022101) #16	LHFPL5 (ENSSBOG00000027639) #17	SRPK1 (ENSSBOG00000034278) #18	SLC26A8 (ENSSBOG00000019666) #19	MAPK14 (ENSSBOG00000027800) #20	MAPK13 (ENSSBOG00000034607) #22	BRPF3 (ENSSBOG00000028254) #23	PNPLA1 (ENSSBOG00000020981) #24	BNIP5 (ENSSBOG00000020368) #25	ETV7 (ENSSBOG00000029790) #27	PXT1 (ENSSBOG00000001322) #28	KCTD20 (ENSSBOG00000021684) #29	STK38 (ENSSBOG00000027316) #30	SRSF3 (ENSSBOG00000022192) #31	CDKN1A (ENSSBOG00000019456) #33	RAB44 (ENSSBOG00000020854) #34	CPNE5 (ENSSBOG00000026861) #35	ENSSBOG00000028233 #36	ENSSBOG00000032887 #37	PI16 (ENSSBOG00000003322)	ENSSBOG00000031310
Tarsier	MODERN SPECIES	4958									ENSTSYG00000027490 #15	CLPS (ENSTSYG00000005087) #16	LHFPL5 (ENSTSYG00000035245) #17	SRPK1 (ENSTSYG00000002255) #18	SLC26A8 (ENSTSYG00000014401) #19	MAPK14 (ENSTSYG00000001163) #20	ENSTSYG00000037191	MAPK13 (ENSTSYG00000028506) #22
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a.d
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325.l #20	ENSGT00940000155325.k.a #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a.d
Mouse lemur	MODERN SPECIES	28	DEF6 (ENSMICG00000015541)	PPARD (ENSMICG00000000028) #7	FANCE (ENSMICG00000012463) #8	RPL10A (ENSMICG00000012458) #9	TULP1 (ENSMICG00000000029) #11	ENSMICG00000030220	FKBP5 (ENSMICG00000013310) #12	ARMC12 (ENSMICG00000035092) #13	ENSMICG00000041586 #14	CLPS (ENSMICG00000004205) #16	LHFPL5 (ENSMICG00000002689) #17	ENSMICG00000002693 #18	ENSMICG00000026992	SLC26A8 (ENSMICG00000043206) #19	ENSMICG00000008182 #20	MAPK13 (ENSMICG00000008188) #22	BRPF3 (ENSMICG00000001182) #23	PNPLA1 (ENSMICG00000011162) #24	BNIP5 (ENSMICG00000011173) #25	ETV7 (ENSMICG00000011184) #27	ENSMICG00000027106	KCTD20 (ENSMICG00000004661) #29	STK38 (ENSMICG00000035391) #30	ENSMICG00000029154 #31	CDKN1A (ENSMICG00000032440) #33	ENSMICG00000032903	CPNE5 (ENSMICG00000004691) #35	PPIL1 (ENSMICG00000035980) #36	C6orf89 (ENSMICG00000010562) #37	PI16 (ENSMICG00000045729)	ENSMICG00000027682
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325.l #20	ENSGT00940000155325.k.a #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a.d
Coquerels sifaka	MODERN SPECIES	356	PPARD (ENSPCOG00000028127) #7	FANCE (ENSPCOG00000003132) #8	RPL10A (ENSPCOG00000023793) #9	TEAD3 (ENSPCOG00000021314) #10	TULP1 (ENSPCOG00000021849) #11	FKBP5 (ENSPCOG00000021003) #12	ARMC12 (ENSPCOG00000007300) #13	ENSPCOG00000018053 #14	ENSPCOG00000018489 #15	CLPS (ENSPCOG00000022003) #16	LHFPL5 (ENSPCOG00000020336) #17	SRPK1 (ENSPCOG00000001383) #18	SLC26A8 (ENSPCOG00000001683) #19	ENSPCOG00000023539	ENSPCOG00000020496 #20	MAPK13 (ENSPCOG00000027961) #22	BRPF3 (ENSPCOG00000020382) #23	PNPLA1 (ENSPCOG00000000768) #24	BNIP5 (ENSPCOG00000011314) #25	ENSPCOG00000016136 #27	ENSPCOG00000026073	KCTD20 (ENSPCOG00000027622) #29	STK38 (ENSPCOG00000008442) #30	SRSF3 (ENSPCOG00000026280) #31	RAB44 (ENSPCOG00000027072) #34	CPNE5 (ENSPCOG00000013003) #35	ENSPCOG00000020403 #36	C6orf89 (ENSPCOG00000021297) #37	PI16 (ENSPCOG00000017925)	MTCH1 (ENSPCOG00000020934)	FGD2 (ENSPCOG00000027498)
Greater bamboo lemur	MODERN SPECIES	1017			PPARD (ENSPSMG00000010451) #7	FANCE (ENSPSMG00000010471) #8	RPL10A (ENSPSMG00000010495) #9	TEAD3 (ENSPSMG00000010546) #10	TULP1 (ENSPSMG00000010619) #11	FKBP5 (ENSPSMG00000010666) #12	ARMC12 (ENSPSMG00000010708) #13	CLPSL2 (ENSPSMG00000010711) #14	CLPS (ENSPSMG00000010719) #16	LHFPL5 (ENSPSMG00000010729) #17	SRPK1 (ENSPSMG00000010786) #18	SLC26A8 (ENSPSMG00000010842) #19	MAPK14 (ENSPSMG00000010982) #20	MAPK13 (ENSPSMG00000011110) #22	BRPF3 (ENSPSMG00000011289) #23	PNPLA1 (ENSPSMG00000011357) #24	BNIP5 (ENSPSMG00000011364) #25	ETV7 (ENSPSMG00000011399) #27	PXT1 (ENSPSMG00000011413) #28	KCTD20 (ENSPSMG00000011447) #29	STK38 (ENSPSMG00000011478) #30	SRSF3 (ENSPSMG00000011516) #31	CDKN1A (ENSPSMG00000011534) #33	RAB44 (ENSPSMG00000011550) #34	CPNE5 (ENSPSMG00000011601) #35	PPIL1 (ENSPSMG00000011613) #36	ENSPSMG00000011620	C6orf89 (ENSPSMG00000011646) #37	PI16 (ENSPSMG00000011660)
Bushbaby	MODERN SPECIES	146	ENSOGAG00000024631	FANCE (ENSOGAG00000002939) #8	TEAD3 (ENSOGAG00000002943) #10	TULP1 (ENSOGAG00000029633) #11	FKBP5 (ENSOGAG00000016164) #12	ENSOGAG00000032836	ARMC12 (ENSOGAG00000025864) #13	CLPSL2 (ENSOGAG00000006388) #14	ENSOGAG00000009050	ENSOGAG00000024915	CLPS (ENSOGAG00000009742) #16	LHFPL5 (ENSOGAG00000009744) #17	SRPK1 (ENSOGAG00000009745) #18	SLC26A8 (ENSOGAG00000002813) #19	MAPK14 (ENSOGAG00000002814) #20	MAPK13 (ENSOGAG00000002816) #22	BRPF3 (ENSOGAG00000002560) #23	PNPLA1 (ENSOGAG00000017067) #24	BNIP5 (ENSOGAG00000031171) #25	ENSOGAG00000017069 #27	KCTD20 (ENSOGAG00000000496) #29	STK38 (ENSOGAG00000000500) #30	SRSF3 (ENSOGAG00000000502) #31	CDKN1A (ENSOGAG00000000504) #33	ENSOGAG00000026730 #34	CPNE5 (ENSOGAG00000002890) #35	PPIL1 (ENSOGAG00000011275) #36	ENSOGAG00000033182	C6orf89 (ENSOGAG00000011278) #37	PI16 (ENSOGAG00000003312)	MTCH1 (ENSOGAG00000025357)
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00980000199407	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Tree shrew	MODERN SPECIES	430															MAPK14 (ENSTBEG00000005679) #20	ENSTBEG00000006283 #22
Glires	ANCESTRAL SPECIES	5	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00980000199407	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT00940000153185.a.a.b	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00980000199407	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Rabbit	MODERN SPECIES	3	SCUBE3 (ENSOCUG00000015611)	ZNF76 (ENSOCUG00000015630)	DEF6 (ENSOCUG00000015644)	PPARD (ENSOCUG00000007732) #7	FKBP5 (ENSOCUG00000005513) #12	FANCE (ENSOCUG00000027207) #8	ENSOCUG00000004065 ##9	TEAD3 (ENSOCUG00000004072) #10	TULP1 (ENSOCUG00000015810) #11	ARMC12 (ENSOCUG00000005519) #13	ENSOCUG00000005183 #15	CLPS (ENSOCUG00000024610) #16	LHFPL5 (ENSOCUG00000011446) #17	SRPK1 (ENSOCUG00000008660) #18	SLC26A8 (ENSOCUG00000014776) #19	MAPK13 (ENSOCUG00000014799) #22	ENSOCUG00000036658	BRPF3 (ENSOCUG00000008621) #23	PNPLA1 (ENSOCUG00000008628) #24	BNIP5 (ENSOCUG00000008639) #25	ETV7 (ENSOCUG00000024492) #27	ENSOCUG00000023308	ENSOCUG00000016154 #29	STK38 (ENSOCUG00000016165) #30	SRSF3 (ENSOCUG00000006684) #31	ENSOCUG00000016048 #33	RAB44 (ENSOCUG00000016053) #34	CPNE5 (ENSOCUG00000023610) #35	PPIL1 (ENSOCUG00000007046) #36	ENSOCUG00000033563 #37	MTCH1 (ENSOCUG00000020935)
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Hystricomorpha	DUPLICATION
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00940000159584.e #22
Naked mole-rat female	MODERN SPECIES	10	ENSHGLG00000041803	ZNF644 (ENSHGLG00000008786)	HFM1 (ENSHGLG00000007780)	CDC7 (ENSHGLG00000046565)	ENSHGLG00000004997	ENSHGLG00000046123	BRDT (ENSHGLG00000004317)	ENSHGLG00000010230	ENSHGLG00000033060	ENSHGLG00000046149	BTBD8 (ENSHGLG00000008571)	ENSHGLG00000012851	ENSHGLG00000012510	ENSHGLG00000011940	RPAP2 (ENSHGLG00000009983)	ENSHGLG00000046873 #22	GFI1 (ENSHGLG00000008020)	ENSHGLG00000047533	EVI5 (ENSHGLG00000005267)	ENSHGLG00000006656	ENSHGLG00000004717	ENSHGLG00000004684	ENSHGLG00000045561	ENSHGLG00000049269	ENSHGLG00000007932	ENSHGLG00000006551	ENSHGLG00000032551	CCDC18 (ENSHGLG00000004402)	ENSHGLG00000004219	FNBP1L (ENSHGLG00000033036)	BCAR3 (ENSHGLG00000009405)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584.f #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT01000000217497	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Naked mole-rat female	MODERN SPECIES	4	DEF6 (ENSHGLG00000012785)	ENSHGLG00000012625 #7	ENSHGLG00000029161	FANCE (ENSHGLG00000012417) #8	RPL10A (ENSHGLG00000012269) #9	TEAD3 (ENSHGLG00000012119) #10	TULP1 (ENSHGLG00000011964) #11	FKBP5 (ENSHGLG00000011702) #12	ARMC12 (ENSHGLG00000011370) #13	CLPSL2 (ENSHGLG00000011202) #14	CLPS (ENSHGLG00000010953) #16	LHFPL5 (ENSHGLG00000010688) #17	Srpk1 (ENSHGLG00000010559) #18	ENSHGLG00000015890 #19	MAPK14 (ENSHGLG00000015825) #20	MAPK13 (ENSHGLG00000015728) #22	BRPF3 (ENSHGLG00000015657) #23	PNPLA1 (ENSHGLG00000015567) #24	ENSHGLG00000036842 #25	ENSHGLG00000050754	ENSHGLG00000017397 #29	STK38 (ENSHGLG00000017058) #30	ENSHGLG00000017051	SRSF3 (ENSHGLG00000017042) #31	CDKN1A (ENSHGLG00000017033) #33	ENSHGLG00000000630	RAB44 (ENSHGLG00000017024) #34	CPNE5 (ENSHGLG00000017384) #35	PPIL1 (ENSHGLG00000017369) #36	ENSHGLG00000019450 #37	ENSHGLG00000042001
Hystricomorpha_a	ANCESTRAL SPECIES	42	ENSGT00940000153185.a.a.b	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584.f #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT01000000217497	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30
Guinea pig	MODERN SPECIES	15	SCUBE3 (ENSCPOG00000015286)	ZNF76 (ENSCPOG00000007381)	DEF6 (ENSCPOG00000027364)	PPARD (ENSCPOG00000011385) #7	FANCE (ENSCPOG00000005569) #8	RPL10A (ENSCPOG00000005577) #9	TEAD3 (ENSCPOG00000005578) #10	TULP1 (ENSCPOG00000022079) #11	FKBP5 (ENSCPOG00000000520) #12	ARMC12 (ENSCPOG00000022443) #13	CLPS (ENSCPOG00000014154) #16	LHFPL5 (ENSCPOG00000021224) #17	SRPK1 (ENSCPOG00000004173) #18	SLC26A8 (ENSCPOG00000014887) #19	MAPK14 (ENSCPOG00000014893) #20	MAPK13 (ENSCPOG00000014626) #22	BRPF3 (ENSCPOG00000010214) #23	PNPLA1 (ENSCPOG00000003920) #24	KCTD20 (ENSCPOG00000032447) #29	STK38 (ENSCPOG00000004471) #30	KCNK5 (ENSCPOG00000021494)	SAYSD1 (ENSCPOG00000015443)	GLP1R (ENSCPOG00000015440)	DNAH8 (ENSCPOG00000010058)	GLO1 (ENSCPOG00000030910)	BTBD9 (ENSCPOG00000014662)	ZFAND3 (ENSCPOG00000014660)	MDGA1 (ENSCPOG00000000671)	CCDC167 (ENSCPOG00000010310)	CMTR1 (ENSCPOG00000010298)	RNF8 (ENSCPOG00000040177)
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000161869	ENSGT00940000153185.a.a.b	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584.f #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT01000000217497	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00940000159813	ENSGT00940000156775	ENSGT00390000004313	ENSGT00940000161009	ENSGT00940000158992	ENSGT00390000009312.h	ENSGT00940000158298	ENSGT00940000165659	ENSGT00390000014679
Degu	MODERN SPECIES	46	SCUBE3 (ENSODEG00000017212)	ENSODEG00000020389	ZNF76 (ENSODEG00000017147)	DEF6 (ENSODEG00000016832)	ENSODEG00000020393	PPARD (ENSODEG00000017223) #7	RPL10A (ENSODEG00000016699) #9	TEAD3 (ENSODEG00000016731) #10	FKBP5 (ENSODEG00000017317) #12	ENSODEG00000016851	ARMC12 (ENSODEG00000016906) #13	CLPS (ENSODEG00000016885) #16	LHFPL5 (ENSODEG00000016672) #17	SRPK1 (ENSODEG00000016786) #18	MAPK14 (ENSODEG00000016354) #20	MAPK13 (ENSODEG00000017060) #22	BRPF3 (ENSODEG00000016708) #23	ENSODEG00000016514 #23	KCTD20 (ENSODEG00000017286) #29	STK38 (ENSODEG00000016941) #30	ENSODEG00000016778	KCNK5 (ENSODEG00000017022)	ENSODEG00000020422	GLP1R (ENSODEG00000016982)	DNAH8 (ENSODEG00000016773)	GLO1 (ENSODEG00000016507)	BTBD9 (ENSODEG00000016311)	ENSODEG00000016428	MDGA1 (ENSODEG00000016824)	CMTR1 (ENSODEG00000017441)	TBC1D22B (ENSODEG00000016816)
Long-tailed chinchilla	MODERN SPECIES	144	TCP11 (ENSCLAG00000011475)	SCUBE3 (ENSCLAG00000012780)	ZNF76 (ENSCLAG00000007582)	DEF6 (ENSCLAG00000010815)	PPARD (ENSCLAG00000008716) #7	FANCE (ENSCLAG00000009867) #8	RPL10A (ENSCLAG00000013481) #9	TEAD3 (ENSCLAG00000012426) #10	ENSCLAG00000007729 #11	FKBP5 (ENSCLAG00000008953) #12	ARMC12 (ENSCLAG00000012362) #13	ENSCLAG00000013482 #16	LHFPL5 (ENSCLAG00000010444) #17	ENSCLAG00000010564 #18	MAPK14 (ENSCLAG00000009182) #20	MAPK13 (ENSCLAG00000012645) #22	BRPF3 (ENSCLAG00000014650) #23	PNPLA1 (ENSCLAG00000014322) #24	BNIP5 (ENSCLAG00000011215) #25	ENSCLAG00000010806	KCTD20 (ENSCLAG00000011525) #29	STK38 (ENSCLAG00000008152) #30	KCNK16 (ENSCLAG00000010814)	KCNK5 (ENSCLAG00000015932)	SAYSD1 (ENSCLAG00000008142)	GLP1R (ENSCLAG00000010274)	DNAH8 (ENSCLAG00000010447)	GLO1 (ENSCLAG00000012717)	BTBD9 (ENSCLAG00000014696)	ENSCLAG00000010007	ZFAND3 (ENSCLAG00000009447)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Eurasian red squirrel	MODERN SPECIES	16	FANCE (ENSSVLG00005008269) #8	RPL10A (ENSSVLG00005008232) #9	TEAD3 (ENSSVLG00005008177) #10	TULP1 (ENSSVLG00005007903) #11	FKBP5 (ENSSVLG00005007720) #12	ARMC12 (ENSSVLG00005007605) #13	CLPSL2 (ENSSVLG00005007579) #14	ENSSVLG00005007555 #15	CLPS (ENSSVLG00005007519) #16	LHFPL5 (ENSSVLG00005007493) #17	ENSSVLG00005007332 #18	ENSSVLG00005007292	ENSSVLG00005007274	SLC26A8 (ENSSVLG00005007071) #19	ENSSVLG00005006939 #20	MAPK13 (ENSSVLG00005006787) #22	BRPF3 (ENSSVLG00005006666) #23	BNIP5 (ENSSVLG00005006367) #25	PXT1 (ENSSVLG00005006244) #28	KCTD20 (ENSSVLG00005006146) #29	STK38 (ENSSVLG00005006116) #30	SRSF3 (ENSSVLG00005006090) #31	CDKN1A (ENSSVLG00005006061) #33	RAB44 (ENSSVLG00005005971) #34	CPNE5 (ENSSVLG00005005838) #35	PPIL1 (ENSSVLG00005005795) #36	C6orf89 (ENSSVLG00005005762) #37	PI16 (ENSSVLG00005005702)	MTCH1 (ENSSVLG00005005671)	FGD2 (ENSSVLG00005005578)	PIM1 (ENSSVLG00005005547)
Marmotini	ANCESTRAL SPECIES	18	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00730000111212.z	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00960000190984	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Alpin marmot	MODERN SPECIES	20	ZNF76 (ENSMMMG00000024327)	DEF6 (ENSMMMG00000024328)	PPARD (ENSMMMG00000024329) #7	FANCE (ENSMMMG00000024330) #8	RPL10A (ENSMMMG00000024331) #9	TEAD3 (ENSMMMG00000024332) #10	ENSMMMG00000024333 #11	FKBP5 (ENSMMMG00000024335) #12	ARMC12 (ENSMMMG00000024339) #13	ENSMMMG00000024340	CLPS (ENSMMMG00000024341) #16	LHFPL5 (ENSMMMG00000024343) #17	SRPK1 (ENSMMMG00000024344) #18	ENSMMMG00000024345 #19	MAPK14 (ENSMMMG00000024347) #20	MAPK13 (ENSMMMG00000024349) #22	BRPF3 (ENSMMMG00000024354) #23	PNPLA1 (ENSMMMG00000024358) #24	ETV7 (ENSMMMG00000024361) #27	ENSMMMG00000024362	ENSMMMG00000024363	ENSMMMG00000024364	KCTD20 (ENSMMMG00000024365) #29	STK38 (ENSMMMG00000024371) #30	SRSF3 (ENSMMMG00000024376) #31	CDKN1A (ENSMMMG00000024377) #33	RAB44 (ENSMMMG00000024379) #34	CPNE5 (ENSMMMG00000024381) #35	PPIL1 (ENSMMMG00000024382) #36	C6orf89 (ENSMMMG00000024383) #37	PI16 (ENSMMMG00000024384)
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00730000111212.z	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00960000190984	ENSGT00950000185279	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Arctic ground squirrel	MODERN SPECIES	25	DEF6 (ENSUPAG00010015048)	PPARD (ENSUPAG00010015080) #7	FANCE (ENSUPAG00010015114) #8	RPL10A (ENSUPAG00010015209) #9	TEAD3 (ENSUPAG00010015261) #10	ENSUPAG00010015324 #11	FKBP5 (ENSUPAG00010015333) #12	ARMC12 (ENSUPAG00010015400) #13	CLPSL2 (ENSUPAG00010015452) #14	ENSUPAG00010015457	CLPS (ENSUPAG00010015472) #16	LHFPL5 (ENSUPAG00010015483) #17	SRPK1 (ENSUPAG00010015498) #18	ENSUPAG00010015523 #19	MAPK14 (ENSUPAG00010015552) #20	MAPK13 (ENSUPAG00010015630) #22	BRPF3 (ENSUPAG00010015651) #23	PNPLA1 (ENSUPAG00010015749) #24	BNIP5 (ENSUPAG00010015770) #25	ETV7 (ENSUPAG00010015790) #27	ENSUPAG00010015813	ENSUPAG00010015816	KCTD20 (ENSUPAG00010015823) #29	STK38 (ENSUPAG00010015884) #30	SRSF3 (ENSUPAG00010015936) #31	CDKN1A (ENSUPAG00010015940) #33	RAB44 (ENSUPAG00010015948) #34	CPNE5 (ENSUPAG00010015960) #35	ENSUPAG00010015992	C6orf89 (ENSUPAG00010015999) #37	PI16 (ENSUPAG00010016051)
Squirrel	MODERN SPECIES	76	DEF6 (ENSSTOG00000023306)	PPARD (ENSSTOG00000019649) #7	FANCE (ENSSTOG00000000259) #8	ENSSTOG00000023366 #9	TEAD3 (ENSSTOG00000024296) #10	TULP1 (ENSSTOG00000015488) #11	FKBP5 (ENSSTOG00000023914) #12	ARMC12 (ENSSTOG00000013713) #13	CLPSL2 (ENSSTOG00000006012) #14	ENSSTOG00000034801	Clps (ENSSTOG00000027903) #16	LHFPL5 (ENSSTOG00000013721) #17	SRPK1 (ENSSTOG00000013724) #18	SLC26A8 (ENSSTOG00000008184) #19	MAPK14 (ENSSTOG00000020831) #20	MAPK13 (ENSSTOG00000025085) #22	ENSSTOG00000033183	BRPF3 (ENSSTOG00000006742) #23	PNPLA1 (ENSSTOG00000026201) #24	BNIP5 (ENSSTOG00000007388) #25	ETV7 (ENSSTOG00000027253) #27	ENSSTOG00000030608	ENSSTOG00000031664	KCTD20 (ENSSTOG00000011974) #29	ENSSTOG00000025407	STK38 (ENSSTOG00000011981) #30	ENSSTOG00000014280 #31	CDKN1A (ENSSTOG00000021551) #33	ENSSTOG00000033346	ENSSTOG00000020682 #34	CPNE5 (ENSSTOG00000019430) #35
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Kangaroo rat	MODERN SPECIES	439	Scube3 (ENSDORG00000003155)	ENSDORG00000004835	Def6 (ENSDORG00000004837)	Ppard (ENSDORG00000009154) #7	Rpl10a (ENSDORG00000024646) #9	Tead3 (ENSDORG00000010798) #10	Tulp1 (ENSDORG00000000427) #11	Fkbp5 (ENSDORG00000007823) #12	Armc12 (ENSDORG00000023597) #13	ENSDORG00000000744 #14	Clps (ENSDORG00000026397) #16	Lhfpl5 (ENSDORG00000024086) #17	Srpk1 (ENSDORG00000028527) #18	Slc26a8 (ENSDORG00000028148) #19	Mapk14 (ENSDORG00000027533) #20	Mapk13 (ENSDORG00000014494) #22	ENSDORG00000024626 #23	ENSDORG00000004827 #23	ENSDORG00000028325 #24	ENSDORG00000028859 #25	ENSDORG00000024772 #28	Kctd20 (ENSDORG00000005520) #29	ENSDORG00000027964 #30	Srsf3 (ENSDORG00000012283) #31	Cdkn1a (ENSDORG00000023688) #33	ENSDORG00000028743 #35	ENSDORG00000028401 #35	Ppil1 (ENSDORG00000024549) #36	BC004004 (ENSDORG00000007836) #37	Pi16 (ENSDORG00000007840)	ENSDORG00000024032
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Lesser Egyptian jerboa	MODERN SPECIES	41	Zfp523 (ENSJJAG00000006658)	Def6 (ENSJJAG00000020328)	Ppard (ENSJJAG00000004398) #7	ENSJJAG00000022676 #8	ENSJJAG00000014896 #9	Tead3 (ENSJJAG00000022931) #10	Tulp1 (ENSJJAG00000023576) #11	Fkbp5 (ENSJJAG00000020149) #12	Armc12 (ENSJJAG00000018237) #13	ENSJJAG00000017544 #14	Clps (ENSJJAG00000018433) #16	Lhfpl5 (ENSJJAG00000018498) #17	Srpk1 (ENSJJAG00000020482) #18	Slc26a8 (ENSJJAG00000020048) #19	Mapk14 (ENSJJAG00000016348) #20	Mapk13 (ENSJJAG00000012060) #22	ENSJJAG00000000522 #23	ENSJJAG00000018307 #23	Pnpla1 (ENSJJAG00000022011) #24	Bnip5 (ENSJJAG00000013964) #25	ENSJJAG00000017410	ENSJJAG00000017222 #29	ENSJJAG00000016482 #30	ENSJJAG00000022324 #31	Cdkn1a (ENSJJAG00000021179) #33	ENSJJAG00000021852 #34	Cpne5 (ENSJJAG00000012782) #35	Ppil1 (ENSJJAG00000020992) #36	BC004004 (ENSJJAG00000017257) #37	Pi16 (ENSJJAG00000022488)	ENSJJAG00000023458
Muroidea	ANCESTRAL SPECIES	15	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.sb.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.sb.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251	ENSGT00940000153394.c.a.h
Chinese hamster chok1gshd	MODERN SPECIES	303	Zfp523 (ENSCGRG00001020582)	Def6 (ENSCGRG00001000149)	Ppard (ENSCGRG00001010044) #7	ENSCGRG00001012736 #8	ENSCGRG00001023791 #9	Tead3 (ENSCGRG00001011025) #10	Tulp1 (ENSCGRG00001022823) #11	Fkbp5 (ENSCGRG00001018256) #12	Armc12 (ENSCGRG00001013411) #13	Clpsl2 (ENSCGRG00001018037) #14	Clps (ENSCGRG00001000490) #16	Lhfpl5 (ENSCGRG00001023708) #17	Srpk1 (ENSCGRG00001019530) #18	Slc26a8 (ENSCGRG00001011828) #19	Mapk14 (ENSCGRG00001021380) #20	Mapk13 (ENSCGRG00001020768) #22	Brpf3 (ENSCGRG00001005636) #23	Pnpla1 (ENSCGRG00001017390) #24	Bnip5 (ENSCGRG00001019118) #25
Golden Hamster	MODERN SPECIES	794	Zfp523 (ENSMAUG00000001011)	Def6 (ENSMAUG00000012255)	Ppard (ENSMAUG00000004049) #7	ENSMAUG00000016572 #8	ENSMAUG00000020124 #9	Tead3 (ENSMAUG00000013377) #10	Tulp1 (ENSMAUG00000019588) #11	Fkbp5 (ENSMAUG00000019727) #12	Armc12 (ENSMAUG00000020880) #13	Clpsl2 (ENSMAUG00000009190) #14	Clps (ENSMAUG00000019258) #16	Lhfpl5 (ENSMAUG00000015982) #17	Srpk1 (ENSMAUG00000009015) #18	Slc26a8 (ENSMAUG00000017560) #19	Mapk14 (ENSMAUG00000015940) #20	Mapk13 (ENSMAUG00000017161) #22	ENSMAUG00000012176 #23	ENSMAUG00000003727 #23	Pnpla1 (ENSMAUG00000009123) #24	Bnip5 (ENSMAUG00000015521) #25	Kctd20 (ENSMAUG00000011835) #29	ENSMAUG00000019969 #30	ENSMAUG00000011512 #31	Cdkn1a (ENSMAUG00000000992) #33	Rab44 (ENSMAUG00000006085) #34	Cpne5 (ENSMAUG00000008415) #35	Ppil1 (ENSMAUG00000008428) #36	BC004004 (ENSMAUG00000009064) #37	Pi16 (ENSMAUG00000013039)	ENSMAUG00000014689	Fgd2 (ENSMAUG00000013041)
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.sb.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Northern American deer mouse	MODERN SPECIES	13	Def6 (ENSPEMG00000012978)	Ppard (ENSPEMG00000006235) #7	Fance (ENSPEMG00000012868) #8	Rpl10a (ENSPEMG00000013589) #9	Tead3 (ENSPEMG00000012216) #10	Tulp1 (ENSPEMG00000015585) #11	ENSPEMG00000030692 #12	ENSPEMG00000028961 #12	Armc12 (ENSPEMG00000019234) #13	Clpsl2 (ENSPEMG00000012070) #14	Clps (ENSPEMG00000000653) #16	Lhfpl5 (ENSPEMG00000012344) #17	Srpk1 (ENSPEMG00000010327) #18	Slc26a8 (ENSPEMG00000016320) #19	Mapk14 (ENSPEMG00000016661) #20	Mapk13 (ENSPEMG00000018845) #22	Brpf3 (ENSPEMG00000025317) #23	Pnpla1 (ENSPEMG00000011924) #24	Bnip5 (ENSPEMG00000012017) #25	Pxt1 (ENSPEMG00000016811) #28	Kctd20 (ENSPEMG00000016381) #29	Stk38 (ENSPEMG00000014581) #30	ENSPEMG00000013444 #31	Cdkn1a (ENSPEMG00000016513) #33	Rab44 (ENSPEMG00000008688) #34	Cpne5 (ENSPEMG00000008964) #35	ENSPEMG00000007309 #36	BC004004 (ENSPEMG00000015973) #37	Pi16 (ENSPEMG00000009543)	Mtch1 (ENSPEMG00000014284)	Fgd2 (ENSPEMG00000008015)
Prairie vole	MODERN SPECIES	352	ENSMOCG00000013791	Def6 (ENSMOCG00000012935)	Ppard (ENSMOCG00000021292) #7	ENSMOCG00000015462 #8	ENSMOCG00000005661 #9	Tead3 (ENSMOCG00000019095) #10	Tulp1 (ENSMOCG00000020188) #11	Fkbp5 (ENSMOCG00000015956) #12	Armc12 (ENSMOCG00000015055) #13	Clpsl2 (ENSMOCG00000014382) #14	Clps (ENSMOCG00000012155) #16	Lhfpl5 (ENSMOCG00000000453) #17	Srpk1 (ENSMOCG00000015538) #18	Slc26a8 (ENSMOCG00000013651) #19	Mapk14 (ENSMOCG00000003170) #20	Mapk13 (ENSMOCG00000002416) #22	Brpf3 (ENSMOCG00000000749) #23	Pnpla1 (ENSMOCG00000017432) #24	Bnip5 (ENSMOCG00000009438) #25	ENSMOCG00000001309	Kctd20 (ENSMOCG00000010354) #29	Stk38 (ENSMOCG00000006743) #30	ENSMOCG00000015471 #31	Cdkn1a (ENSMOCG00000020134) #33	Rab44 (ENSMOCG00000015106) #34	Cpne5 (ENSMOCG00000002894) #35	Ppil1 (ENSMOCG00000022982) #36	BC004004 (ENSMOCG00000021147) #37	Pi16 (ENSMOCG00000022919)	Mtch1 (ENSMOCG00000002184)	Fgd2 (ENSMOCG00000022007)
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Mus	ANCESTRAL SPECIES	21	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.wb.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.wb.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.wb.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Mouse	MODERN SPECIES	8	Def6 (ENSMUSG00000002257)	Ppard (ENSMUSG00000002250) #7	Fance (ENSMUSG00000007570) #8	Rpl10a (ENSMUSG00000037805) #9	Tead3 (ENSMUSG00000002249) #10	Tulp1 (ENSMUSG00000037446) #11	Fkbp5 (ENSMUSG00000024222) #12	Armc12 (ENSMUSG00000024223) #13	Clpsl2 (ENSMUSG00000024224) #14	Clps (ENSMUSG00000024225) #16	Lhfpl5 (ENSMUSG00000062252) #17	Srpk1 (ENSMUSG00000004865) #18	Slc26a8 (ENSMUSG00000036196) #19	Mapk14 (ENSMUSG00000053436) #20	Gng5c (ENSMUSG00000117145)	Mapk13 (ENSMUSG00000004864) #22	Brpf3 (ENSMUSG00000063952) #23	Pnpla1 (ENSMUSG00000043286) #24	Bnip5 (ENSMUSG00000048905) #25	Pxt1 (ENSMUSG00000045378) #28	Kctd20 (ENSMUSG00000005936) #29	Stk38 (ENSMUSG00000024006) #30	Srsf3 (ENSMUSG00000071172) #31	Cdkn1a (ENSMUSG00000023067) #33	Rab44 (ENSMUSG00000064147) #34	Cpne5 (ENSMUSG00000024008) #35	Ppil1 (ENSMUSG00000024007) #36	BC004004 (ENSMUSG00000052712) #37	Pi16 (ENSMUSG00000024011)	Mtch1 (ENSMUSG00000024012)	Fgd2 (ENSMUSG00000024013)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.wb.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
spretus	MODERN SPECIES	8	Zfp523 (MGP_SPRETEiJ_G0022227)	Def6 (MGP_SPRETEiJ_G0022228)	MGP_SPRETEiJ_G0022229 #7	MGP_SPRETEiJ_G0022230 #8	Rpl10a (MGP_SPRETEiJ_G0022231) #9	Tead3 (MGP_SPRETEiJ_G0022232) #10	Tulp1 (MGP_SPRETEiJ_G0022233) #11	Fkbp5 (MGP_SPRETEiJ_G0022234) #12	Armc12 (MGP_SPRETEiJ_G0022235) #13	Clpsl2 (MGP_SPRETEiJ_G0022236) #14	Clps (MGP_SPRETEiJ_G0022237) #16	Lhfpl5 (MGP_SPRETEiJ_G0022238) #17	Srpk1 (MGP_SPRETEiJ_G0022239) #18	Slc26a8 (MGP_SPRETEiJ_G0022240) #19	Mapk14 (MGP_SPRETEiJ_G0022241) #20	Mapk13 (MGP_SPRETEiJ_G0022242) #22	Brpf3 (MGP_SPRETEiJ_G0022243) #23	Pnpla1 (MGP_SPRETEiJ_G0022244) #24	Bnip5 (MGP_SPRETEiJ_G0022245) #25	MGP_SPRETEiJ_G0022246 #28	Kctd20 (MGP_SPRETEiJ_G0022247) #29	Stk38 (MGP_SPRETEiJ_G0022248) #30	Cdkn1a (MGP_SPRETEiJ_G0022250) #33	MGP_SPRETEiJ_G0022251 #34	Cpne5 (MGP_SPRETEiJ_G0022252) #35	Ppil1 (MGP_SPRETEiJ_G0022253) #36	BC004004 (MGP_SPRETEiJ_G0022254) #37	Pi16 (MGP_SPRETEiJ_G0022255)	Mtch1 (MGP_SPRETEiJ_G0022256)	MGP_SPRETEiJ_G0022257	Pim1 (MGP_SPRETEiJ_G0022258)
Steppe mouse	MODERN SPECIES	3360	Zfp523 (ENSMSIG00000007823)	Def6 (ENSMSIG00000007926)	ENSMSIG00000007962 #7	Fance (ENSMSIG00000008000) #8	Rpl10a (ENSMSIG00000008210) #9	Tead3 (ENSMSIG00000008386) #10	Tulp1 (ENSMSIG00000008568) #11	Fkbp5 (ENSMSIG00000008809) #12	Armc12 (ENSMSIG00000008938) #13	Clpsl2 (ENSMSIG00000009026) #14	Clps (ENSMSIG00000009048) #16	Lhfpl5 (ENSMSIG00000009063) #17	Srpk1 (ENSMSIG00000009089) #18	Slc26a8 (ENSMSIG00000009219) #19	Mapk14 (ENSMSIG00000009527) #20	Mapk13 (ENSMSIG00000009648) #22	Brpf3 (ENSMSIG00000009664) #23	Pnpla1 (ENSMSIG00000009903) #24	Bnip5 (ENSMSIG00000009932) #25	ENSMSIG00000009977 #28	Kctd20 (ENSMSIG00000009999) #29	Stk38 (ENSMSIG00000010088) #30	ENSMSIG00000010196 #31	Cdkn1a (ENSMSIG00000010224) #33	Rab44 (ENSMSIG00000010235) #34	Cpne5 (ENSMSIG00000010284) #35	Ppil1 (ENSMSIG00000010374) #36	BC004004 (ENSMSIG00000010390) #37	ENSMSIG00000010431	Mtch1 (ENSMSIG00000010448)	Fgd2 (ENSMSIG00000010484)
Ryukyu mouse	MODERN SPECIES	8	Zfp523 (MGP_CAROLIEiJ_G0021314)	Def6 (MGP_CAROLIEiJ_G0021315)	Ppard (MGP_CAROLIEiJ_G0021316) #7	MGP_CAROLIEiJ_G0021317 #8	Rpl10a (MGP_CAROLIEiJ_G0021318) #9	Tead3 (MGP_CAROLIEiJ_G0021319) #10	Tulp1 (MGP_CAROLIEiJ_G0021320) #11	Fkbp5 (MGP_CAROLIEiJ_G0021321) #12	MGP_CAROLIEiJ_G0021322 #13	Clpsl2 (MGP_CAROLIEiJ_G0021323) #14	Clps (MGP_CAROLIEiJ_G0021324) #16	Lhfpl5 (MGP_CAROLIEiJ_G0021325) #17	Srpk1 (MGP_CAROLIEiJ_G0021326) #18	Slc26a8 (MGP_CAROLIEiJ_G0021327) #19	Mapk14 (MGP_CAROLIEiJ_G0021328) #20	Mapk13 (MGP_CAROLIEiJ_G0021329) #22	Brpf3 (MGP_CAROLIEiJ_G0021330) #23	Pnpla1 (MGP_CAROLIEiJ_G0021331) #24	Bnip5 (MGP_CAROLIEiJ_G0021332) #25	MGP_CAROLIEiJ_G0021333 #28	Kctd20 (MGP_CAROLIEiJ_G0021334) #29	Stk38 (MGP_CAROLIEiJ_G0021335) #30	Srsf3 (MGP_CAROLIEiJ_G0021336) #31	Cdkn1a (MGP_CAROLIEiJ_G0021337) #33	MGP_CAROLIEiJ_G0021338 #34	Cpne5 (MGP_CAROLIEiJ_G0021339) #35	Ppil1 (MGP_CAROLIEiJ_G0021340) #36	BC004004 (MGP_CAROLIEiJ_G0021341) #37	Pi16 (MGP_CAROLIEiJ_G0021342)	Mtch1 (MGP_CAROLIEiJ_G0021343)	MGP_CAROLIEiJ_G0021344
Shrew mouse	MODERN SPECIES	13	Zfp523 (MGP_PahariEiJ_G0023632)	Def6 (MGP_PahariEiJ_G0023633)	Ppard (MGP_PahariEiJ_G0023634) #7	MGP_PahariEiJ_G0023635 #8	Rpl10a (MGP_PahariEiJ_G0023636) #9	Tead3 (MGP_PahariEiJ_G0023637) #10	Tulp1 (MGP_PahariEiJ_G0023638) #11	Fkbp5 (MGP_PahariEiJ_G0023639) #12	MGP_PahariEiJ_G0023640 #13	Clpsl2 (MGP_PahariEiJ_G0023641) #14	Clps (MGP_PahariEiJ_G0023642) #16	Lhfpl5 (MGP_PahariEiJ_G0023643) #17	Srpk1 (MGP_PahariEiJ_G0023644) #18	Slc26a8 (MGP_PahariEiJ_G0023645) #19	MGP_PahariEiJ_G0023646 #20	Mapk13 (MGP_PahariEiJ_G0023647) #22	Brpf3 (MGP_PahariEiJ_G0023648) #23	Pnpla1 (MGP_PahariEiJ_G0023649) #24	Bnip5 (MGP_PahariEiJ_G0023650) #25	MGP_PahariEiJ_G0023651 #28	Kctd20 (MGP_PahariEiJ_G0023652) #29	Stk38 (MGP_PahariEiJ_G0023653) #30	Srsf3 (MGP_PahariEiJ_G0023654) #31	Cdkn1a (MGP_PahariEiJ_G0023655) #33	MGP_PahariEiJ_G0023656 #34	Cpne5 (MGP_PahariEiJ_G0023657) #35	Ppil1 (MGP_PahariEiJ_G0023658) #36	BC004004 (MGP_PahariEiJ_G0023659) #37	Pi16 (MGP_PahariEiJ_G0023660)	Mtch1 (MGP_PahariEiJ_G0023661)	MGP_PahariEiJ_G0023662
Rat	MODERN SPECIES	12	Zfp523 (ENSRNOG00000000501)	Def6 (ENSRNOG00000000502)	Ppard (ENSRNOG00000000503) #7	Fance (ENSRNOG00000000504) #8	Rpl10a (ENSRNOG00000000505) #9	Tead3 (ENSRNOG00000000506) #10	Tulp1 (ENSRNOG00000000507) #11	Fkbp5 (ENSRNOG00000022523) #12	Armc12 (ENSRNOG00000000508) #13	Clpsl2 (ENSRNOG00000038807) #14	Clps (ENSRNOG00000000510) #16	Lhfpl5 (ENSRNOG00000022283) #17	Srpk1 (ENSRNOG00000000511) #18	Slc26a8 (ENSRNOG00000000512) #19	Mapk14 (ENSRNOG00000000513) #20	Mapk13 (ENSRNOG00000000515) #22	Brpf3 (ENSRNOG00000028641) #23	ENSRNOG00000070267	Pnpla1 (ENSRNOG00000028622) #24	Bnip5 (ENSRNOG00000016997) #25	Pxt1 (ENSRNOG00000000516) #28	Kctd20 (ENSRNOG00000000517) #29	Stk38 (ENSRNOG00000000519) #30	Srsf3 (ENSRNOG00000000520) #31	Cdkn1a (ENSRNOG00000000521) #33	Rab44 (ENSRNOG00000001869) #34	Cpne5 (ENSRNOG00000000522) #35	Ppil1 (ENSRNOG00000000523) #36	RGD735065 (ENSRNOG00000000524) #37	Pi16 (ENSRNOG00000000525)	Mtch1 (ENSRNOG00000000527)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1087	ENSNGAG00000012643	Def6 (ENSNGAG00000002294)	Ppard (ENSNGAG00000000295) #7	ENSNGAG00000018624 #8	Rpl10a (ENSNGAG00000021389) #9	Tead3 (ENSNGAG00000014489) #10	ENSNGAG00000012735 #11	Fkbp5 (ENSNGAG00000010012) #12	Armc12 (ENSNGAG00000006271) #13	Clpsl2 (ENSNGAG00000005121) #14	Clps (ENSNGAG00000003954) #16	Lhfpl5 (ENSNGAG00000019158) #17	Srpk1 (ENSNGAG00000015100) #18	Slc26a8 (ENSNGAG00000013089) #19	Mapk14 (ENSNGAG00000010289) #20	Mapk13 (ENSNGAG00000021207) #22	ENSNGAG00000021001 #23	ENSNGAG00000020725 #23	Pnpla1 (ENSNGAG00000019143) #24	Bnip5 (ENSNGAG00000018282) #25	ENSNGAG00000017118 #28	Kctd20 (ENSNGAG00000016900) #29	Stk38 (ENSNGAG00000015957) #30	Srsf3 (ENSNGAG00000015240) #31	Cdkn1a (ENSNGAG00000015092) #33	ENSNGAG00000014378 #34	Cpne5 (ENSNGAG00000012496) #35	Ppil1 (ENSNGAG00000008969) #36	BC004004 (ENSNGAG00000006992) #37	ENSNGAG00000005752	Mtch1 (ENSNGAG00000004490)
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00990000203541.a.a.a.a.b ##17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159584 #22
Hedgehog	MODERN SPECIES	5080																ENSEEUG00000012267 #22
Common shrew	MODERN SPECIES	3926																ENSSARG00000006324 #22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156819.a.b	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Suina	ANCESTRAL SPECIES	17	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Pig	MODERN SPECIES	15	DEF6 (ENSSSCG00000001538)	PPARD (ENSSSCG00000001539) #7	FANCE (ENSSSCG00000001546) #8	RPL10A (ENSSSCG00000001543) #9	TEAD3 (ENSSSCG00000001544) #10	ENSSSCG00000062364	TULP1 (ENSSSCG00000035972) #11	FKBP5 (ENSSSCG00000001549) #12	ARMC12 (ENSSSCG00000001550) #13	CLPSL2 (ENSSSCG00000001551) #14	CLPS (ENSSSCG00000001552) #16	LHFPL5 (ENSSSCG00000001553) #17	SRPK1 (ENSSSCG00000001554) #18	SLC26A8 (ENSSSCG00000001555) #19	MAPK14 (ENSSSCG00000001556) #20	MAPK13 (ENSSSCG00000038774) #22	BRPF3 (ENSSSCG00000020803) #23	PNPLA1 (ENSSSCG00000001559) #24	BNIP5 (ENSSSCG00000001560) #25	ETV7 (ENSSSCG00000001561) #27	PXT1 (ENSSSCG00000036420) #28	KCTD20 (ENSSSCG00000001562) #29	STK38 (ENSSSCG00000001563) #30	SRSF3 (ENSSSCG00000001564) #31	CDKN1A (ENSSSCG00000001565) #33	RAB44 (ENSSSCG00000001566) #34	CPNE5 (ENSSSCG00000001567) #35	PPIL1 (ENSSSCG00000040984) #36	C6orf89 (ENSSSCG00000035341) #37	PI16 (ENSSSCG00000001570)	MTCH1 (ENSSSCG00000001571)
Chacoan peccary	MODERN SPECIES	782	ZNF76 (ENSCWAG00000010458)	DEF6 (ENSCWAG00000010415)	PPARD (ENSCWAG00000010262) #7	FANCE (ENSCWAG00000010228) #8	RPL10A (ENSCWAG00000010172) #9	TEAD3 (ENSCWAG00000010092) #10	TULP1 (ENSCWAG00000009432) #11	FKBP5 (ENSCWAG00000009333) #12	ARMC12 (ENSCWAG00000009094) #13	CLPSL2 (ENSCWAG00000009045) #14	CLPS (ENSCWAG00000008987) #16	LHFPL5 (ENSCWAG00000008937) #17	SRPK1 (ENSCWAG00000008797) #18	SLC26A8 (ENSCWAG00000008492) #19	MAPK14 (ENSCWAG00000008308) #20	MAPK13 (ENSCWAG00000008035) #22	BRPF3 (ENSCWAG00000007497) #23	PNPLA1 (ENSCWAG00000007425) #24	BNIP5 (ENSCWAG00000007363) #25	ETV7 (ENSCWAG00000007204) #27	PXT1 (ENSCWAG00000007174) #28	KCTD20 (ENSCWAG00000007127) #29	STK38 (ENSCWAG00000007089) #30	SRSF3 (ENSCWAG00000007064) #31	CDKN1A (ENSCWAG00000007050) #33	RAB44 (ENSCWAG00000006989) #34	CPNE5 (ENSCWAG00000006852) #35	PPIL1 (ENSCWAG00000006814) #36	C6orf89 (ENSCWAG00000006749) #37	PI16 (ENSCWAG00000006729)	MTCH1 (ENSCWAG00000006696)
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Camelidae	ANCESTRAL SPECIES	13	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Arabian camel	MODERN SPECIES	12	ZNF76 (ENSCDRG00005008400)	DEF6 (ENSCDRG00005008572)	PPARD (ENSCDRG00005008667) #7	FANCE (ENSCDRG00005008852) #8	RPL10A (ENSCDRG00005008906) #9	TEAD3 (ENSCDRG00005008998) #10	TULP1 (ENSCDRG00005009224) #11	FKBP5 (ENSCDRG00005009952) #12	ARMC12 (ENSCDRG00005010107) #13	CLPSL2 (ENSCDRG00005010158) #14	CLPS (ENSCDRG00005010243) #16	LHFPL5 (ENSCDRG00005010323) #17	SRPK1 (ENSCDRG00005010390) #18	SLC26A8 (ENSCDRG00005010554) #19	MAPK14 (ENSCDRG00005010666) #20	MAPK13 (ENSCDRG00005010926) #22	BRPF3 (ENSCDRG00005011112) #23	PNPLA1 (ENSCDRG00005011395) #24	BNIP5 (ENSCDRG00005011489) #25	ETV7 (ENSCDRG00005011656) #27	PXT1 (ENSCDRG00005011747) #28	KCTD20 (ENSCDRG00005011789) #29	STK38 (ENSCDRG00005011917) #30	SRSF3 (ENSCDRG00005011966) #31	CDKN1A (ENSCDRG00005012011) #33	RAB44 (ENSCDRG00005012046) #34	CPNE5 (ENSCDRG00005012211) #35	PPIL1 (ENSCDRG00005012340) #36	C6orf89 (ENSCDRG00005012402) #37	PI16 (ENSCDRG00005012521)	MTCH1 (ENSCDRG00005012553)
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Pecora	ANCESTRAL SPECIES	21	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.f #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Percora_a	ANCESTRAL SPECIES	12	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.f #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Bovidae	ANCESTRAL SPECIES	13	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.f #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Caprinae	ANCESTRAL SPECIES	16	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.f.l #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b.a #30	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Goat	MODERN SPECIES	15	DEF6 (ENSCHIG00000015411)	PPARD (ENSCHIG00000013898) #7	ENSCHIG00000005328	FANCE (ENSCHIG00000024074) #8	ENSCHIG00000025943 #9	TEAD3 (ENSCHIG00000018959) #10	TULP1 (ENSCHIG00000018872) #11	FKBP5 (ENSCHIG00000014746) #12	ARMC12 (ENSCHIG00000003988) #13	CLPSL2 (ENSCHIG00000014897) #14	CLPS (ENSCHIG00000017423) #16	LHFPL5 (ENSCHIG00000011231) #17	SRPK1 (ENSCHIG00000014048) #18	SLC26A8 (ENSCHIG00000014807) #19	MAPK14 (ENSCHIG00000000509) #20	MAPK13 (ENSCHIG00000023563) #22	BRPF3 (ENSCHIG00000020726) #23	PNPLA1 (ENSCHIG00000020453) #24	BNIP5 (ENSCHIG00000024841) #25	PXT1 (ENSCHIG00000017213) #28	KCTD20 (ENSCHIG00000022727) #29	ENSCHIG00000010580 #30	ENSCHIG00000007771	ENSCHIG00000016239	SRSF3 (ENSCHIG00000009659) #31	ENSCHIG00000009800	CDKN1A (ENSCHIG00000006042) #33	RAB44 (ENSCHIG00000015827) #34	CPNE5 (ENSCHIG00000004157) #35	PPIL1 (ENSCHIG00000013923) #36	C6orf89 (ENSCHIG00000024049) #37
Rambouillet Sheep	MODERN SPECIES	12	SCUBE3 (ENSOARG00020021445)	ZNF76 (ENSOARG00020021577)	DEF6 (ENSOARG00020021870)	PPARD (ENSOARG00020021914) #7	RPL10A (ENSOARG00020022050) #9	TEAD3 (ENSOARG00020022091) #10	TULP1 (ENSOARG00020022333) #11	FKBP5 (ENSOARG00020022803) #12	ARMC12 (ENSOARG00020022910) #13	CLPSL2 (ENSOARG00020022967) #14	CLPS (ENSOARG00020022993) #16	LHFPL5 (ENSOARG00020023020) #17	SRPK1 (ENSOARG00020023049) #18	SLC26A8 (ENSOARG00020023144) #19	MAPK14 (ENSOARG00020023336) #20	MAPK13 (ENSOARG00020023522) #22	BRPF3 (ENSOARG00020023590) #23	PNPLA1 (ENSOARG00020023718) #24	BNIP5 (ENSOARG00020023761) #25	PXT1 (ENSOARG00020023800) #28	KCTD20 (ENSOARG00020023831) #29	STK38 (ENSOARG00020023899) #30	SRSF3 (ENSOARG00020023931) #31	ENSOARG00020023940	CDKN1A (ENSOARG00020023947) #33	RAB44 (ENSOARG00020023968) #34	CPNE5 (ENSOARG00020023995) #35	PPIL1 (ENSOARG00020024082) #36	C6orf89 (ENSOARG00020024098) #37	PI16 (ENSOARG00020024129)	MTCH1 (ENSOARG00020024151)
Bovinae	ANCESTRAL SPECIES	9	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.f #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000157353.qb.a	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a.y #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Bos	ANCESTRAL SPECIES	17	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.f #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000157353.qb.a	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a.x.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C.g #36	ENSGT00390000014270 #37	ENSGT00940000162458
Bos_a	ANCESTRAL SPECIES	11	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.f #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a.y #31	ENSGT00390000005569.x.a.b.a	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C.g #36	ENSGT00390000014270 #37
Domestic yak	MODERN SPECIES	16	PPARD (ENSBGRG00000016651) #7	ENSBGRG00000016542	FANCE (ENSBGRG00000016287) #8	RPL10A (ENSBGRG00000016190) #9	ENSBGRG00000016171	TEAD3 (ENSBGRG00000015934) #10	TULP1 (ENSBGRG00000015148) #11	FKBP5 (ENSBGRG00000014981) #12	ARMC12 (ENSBGRG00000014897) #13	CLPSL2 (ENSBGRG00000014848) #14	CLPS (ENSBGRG00000014811) #16	LHFPL5 (ENSBGRG00000014762) #17	ENSBGRG00000014743	SRPK1 (ENSBGRG00000014285) #18	SLC26A8 (ENSBGRG00000013741) #19	MAPK13 (ENSBGRG00000012243) #22	BRPF3 (ENSBGRG00000011913) #23	PNPLA1 (ENSBGRG00000011773) #24	BNIP5 (ENSBGRG00000011629) #25	PXT1 (ENSBGRG00000011565) #28	KCTD20 (ENSBGRG00000011451) #29	STK38 (ENSBGRG00000011377) #30	ENSBGRG00000011348	ENSBGRG00000011325	SRSF3 (ENSBGRG00000011262) #31	ENSBGRG00000011214	CDKN1A (ENSBGRG00000011138) #33	CPNE5 (ENSBGRG00000010533) #35	PPIL1 (ENSBGRG00000010449) #36	C6orf89 (ENSBGRG00000010315) #37	PI16 (ENSBGRG00000010259)
Wild yak	MODERN SPECIES	326														SLC26A8 (ENSBMUG00000013260) #19	MAPK14 (ENSBMUG00000013192) #20	MAPK13 (ENSBMUG00000013039) #22	BRPF3 (ENSBMUG00000012981) #23	PNPLA1 (ENSBMUG00000012843) #24	BNIP5 (ENSBMUG00000012819) #25	PXT1 (ENSBMUG00000012758) #28	KCTD20 (ENSBMUG00000012747) #29	STK38 (ENSBMUG00000012681) #30	ENSBMUG00000012659	ENSBMUG00000012641	ENSBMUG00000012637 #31	ENSBMUG00000012626	CDKN1A (ENSBMUG00000012606) #33	RAB44 (ENSBMUG00000012587) #34
Bos_b	ANCESTRAL SPECIES	8	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.f #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000157353.qb.a	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000010721.a.a.a.a.d	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C.g #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Cow	MODERN SPECIES	15	PPARD (ENSBTAG00000017542) #7	FANCE (ENSBTAG00000019492) #8	RPL10A (ENSBTAG00000019494) #9	TEAD3 (ENSBTAG00000019495) #10	ENSBTAG00000053636	TULP1 (ENSBTAG00000034287) #11	FKBP5 (ENSBTAG00000047502) #12	ARMC12 (ENSBTAG00000010877) #13	CLPSL2 (ENSBTAG00000048447) #14	CLPS (ENSBTAG00000016833) #16	LHFPL5 (ENSBTAG00000016834) #17	SRPK1 (ENSBTAG00000016838) #18	ENSBTAG00000046180	SLC26A8 (ENSBTAG00000017251) #19	MAPK14 (ENSBTAG00000020783) #20	MAPK13 (ENSBTAG00000010007) #22	BRPF3 (ENSBTAG00000013316) #23	PNPLA1 (ENSBTAG00000015118) #24	BNIP5 (ENSBTAG00000017617) #25	ENSBTAG00000052568	PXT1 (ENSBTAG00000053750) #28	KCTD20 (ENSBTAG00000020595) #29	STK38 (ENSBTAG00000011126) #30	ENSBTAG00000004219	SRSF3 (ENSBTAG00000040006) #31	RPS4Y1 (ENSBTAG00000025617)	CDKN1A (ENSBTAG00000008353) #33	ENSBTAG00000045551	RAB44 (ENSBTAG00000050445) #34	CPNE5 (ENSBTAG00000007514) #35	PPIL1 (ENSBTAG00000002376) #36
American bison	MODERN SPECIES	3186	PPARD (ENSBBBG00000013721) #7	FANCE (ENSBBBG00000013719) #8	RPL10A (ENSBBBG00000013708) #9	TEAD3 (ENSBBBG00000013702) #10	ENSBBBG00000001536	TULP1 (ENSBBBG00000007695) #11	FKBP5 (ENSBBBG00000013674) #12	ARMC12 (ENSBBBG00000013631) #13	CLPSL2 (ENSBBBG00000002836) #14	CLPS (ENSBBBG00000008446) #16	LHFPL5 (ENSBBBG00000013611) #17	SRPK1 (ENSBBBG00000002827) #18	ENSBBBG00000013576	SLC26A8 (ENSBBBG00000013569) #19	MAPK14 (ENSBBBG00000013542) #20	MAPK13 (ENSBBBG00000013444) #22	BRPF3 (ENSBBBG00000013404) #23	PNPLA1 (ENSBBBG00000002712) #24	BNIP5 (ENSBBBG00000002706) #25	ENSBBBG00000001624	PXT1 (ENSBBBG00000002694) #28	KCTD20 (ENSBBBG00000013283) #29	ENSBBBG00000013264 #30	ENSBBBG00000013253	ENSBBBG00000001645	ENSBBBG00000002676 #31	ENSBBBG00000002674	CDKN1A (ENSBBBG00000013232) #33	ENSBBBG00000013221	RAB44 (ENSBBBG00000013215) #34	CPNE5 (ENSBBBG00000002665) #35
Siberian musk deer	MODERN SPECIES	355	ZNF76 (ENSMMSG00000023755)	DEF6 (ENSMMSG00000023768)	PPARD (ENSMMSG00000023777) #7	FANCE (ENSMMSG00000004572) #8	ENSMMSG00000004639 #9	TEAD3 (ENSMMSG00000004692) #10	TULP1 (ENSMMSG00000004824) #11	FKBP5 (ENSMMSG00000005251) #12	ARMC12 (ENSMMSG00000005327) #13	CLPSL2 (ENSMMSG00000005400) #14	CLPS (ENSMMSG00000005439) #16	LHFPL5 (ENSMMSG00000005472) #17	SRPK1 (ENSMMSG00000005523) #18	SLC26A8 (ENSMMSG00000005688) #19	ENSMMSG00000005760 #20	MAPK13 (ENSMMSG00000005909) #22	BRPF3 (ENSMMSG00000005977) #23	PNPLA1 (ENSMMSG00000006075) #24	ENSMMSG00000006105 #25	PXT1 (ENSMMSG00000006160) #28	ENSMMSG00000006191 #29	STK38 (ENSMMSG00000006251) #30	SRSF3 (ENSMMSG00000006324) #31	ENSMMSG00000006352	CDKN1A (ENSMMSG00000006370) #33	RAB44 (ENSMMSG00000006400) #34	CPNE5 (ENSMMSG00000006432) #35	PPIL1 (ENSMMSG00000006470) #36	C6orf89 (ENSMMSG00000006496) #37	PI16 (ENSMMSG00000006545)	MTCH1 (ENSMMSG00000006585)
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.d #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000014814.a.b.a.a.b	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.d #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000014814.a.b.a.a.b	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.d #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000014814.a.b.a.a.b	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b.d #9	ENSGT00950000182956.b.b.b #10	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.h.b #30	ENSGT00390000014814.a.b.a.a.b	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Narwhal	MODERN SPECIES	310	PPARD (ENSMMNG00015010868) #7	FANCE (ENSMMNG00015010813) #8	ENSMMNG00015010773	TEAD3 (ENSMMNG00015010746) #10	TULP1 (ENSMMNG00015010597) #11	FKBP5 (ENSMMNG00015010515) #12	ARMC12 (ENSMMNG00015010485) #13	CLPSL2 (ENSMMNG00015010467) #14	CLPS (ENSMMNG00015010451) #16	LHFPL5 (ENSMMNG00015010434) #17	SRPK1 (ENSMMNG00015010401) #18	ENSMMNG00015010381	ENSMMNG00015010370	SLC26A8 (ENSMMNG00015010307) #19	MAPK14 (ENSMMNG00015010235) #20	MAPK13 (ENSMMNG00015010177) #22	BRPF3 (ENSMMNG00015010147) #23	PNPLA1 (ENSMMNG00015010111) #24	BNIP5 (ENSMMNG00015010092) #25	PXT1 (ENSMMNG00015010063) #28	KCTD20 (ENSMMNG00015010053) #29	STK38 (ENSMMNG00015010042) #30	ENSMMNG00015010032	SRSF3 (ENSMMNG00015010026) #31	ENSMMNG00015010020	CDKN1A (ENSMMNG00015010015) #33	RAB44 (ENSMMNG00015009997) #34	CPNE5 (ENSMMNG00015009937) #35	PPIL1 (ENSMMNG00015009922) #36	C6orf89 (ENSMMNG00015009906) #37	PI16 (ENSMMNG00015009900)
Beluga whale	MODERN SPECIES	8	PPARD (ENSDLEG00000020180) #7	FANCE (ENSDLEG00000020186) #8	ENSDLEG00000020191 #9	TEAD3 (ENSDLEG00000020206) #10	ENSDLEG00000020207	TULP1 (ENSDLEG00000020208) #11	ENSDLEG00000020213	FKBP5 (ENSDLEG00000020215) #12	ARMC12 (ENSDLEG00000020217) #13	ENSDLEG00000020220 #16	LHFPL5 (ENSDLEG00000020223) #17	SRPK1 (ENSDLEG00000020227) #18	SLC26A8 (ENSDLEG00000020237) #19	ENSDLEG00000020262	MAPK14 (ENSDLEG00000020270) #20	MAPK13 (ENSDLEG00000020302) #22	BRPF3 (ENSDLEG00000020310) #23	PNPLA1 (ENSDLEG00000020311) #24	BNIP5 (ENSDLEG00000020312) #25	PXT1 (ENSDLEG00000020318) #28	KCTD20 (ENSDLEG00000020321) #29	STK38 (ENSDLEG00000020326) #30	ENSDLEG00000020337	ENSDLEG00000020340 #31	CDKN1A (ENSDLEG00000020343) #33	RAB44 (ENSDLEG00000020348) #34	CPNE5 (ENSDLEG00000020365) #35	PPIL1 (ENSDLEG00000020378)	CUNH6orf89 (ENSDLEG00000020383) #37	PI16 (ENSDLEG00000020389)	MTCH1 (ENSDLEG00000020392)
Vaquita	MODERN SPECIES	2	DEF6 (ENSPSNG00000017425)	PPARD (ENSPSNG00000017498) #7	FANCE (ENSPSNG00000017689) #8	ENSPSNG00000017751 #9	TEAD3 (ENSPSNG00000017802) #10	TULP1 (ENSPSNG00000017936) #11	FKBP5 (ENSPSNG00000018365) #12	ARMC12 (ENSPSNG00000018419) #13	CLPSL2 (ENSPSNG00000018537) #14	CLPS (ENSPSNG00000018593) #16	LHFPL5 (ENSPSNG00000018642) #17	SRPK1 (ENSPSNG00000018699) #18	SLC26A8 (ENSPSNG00000018929) #19	ENSPSNG00000018972	MAPK14 (ENSPSNG00000019052) #20	MAPK13 (ENSPSNG00000019231) #22	BRPF3 (ENSPSNG00000019465) #23	PNPLA1 (ENSPSNG00000019561) #24	BNIP5 (ENSPSNG00000019613) #25	ENSPSNG00000019718 #27	PXT1 (ENSPSNG00000019759) #28	KCTD20 (ENSPSNG00000019789) #29	STK38 (ENSPSNG00000019832) #30	ENSPSNG00000019858	SRSF3 (ENSPSNG00000019876) #31	CDKN1A (ENSPSNG00000019908) #33	RAB44 (ENSPSNG00000019965) #34	CPNE5 (ENSPSNG00000020126) #35	PPIL1 (ENSPSNG00000020265) #36	C6orf89 (ENSPSNG00000020322) #37	PI16 (ENSPSNG00000020409)
Dolphin	MODERN SPECIES	1245								ARMC12 (ENSTTRG00000014321) #13	ENSTTRG00000014322	ENSTTRG00000014325 #15	ENSTTRG00000014333 #16	LHFPL5 (ENSTTRG00000014335) #17	SRPK1 (ENSTTRG00000014344) #18	SLC26A8 (ENSTTRG00000014382) #19	MAPK14 (ENSTTRG00000014406) #20	MAPK13 (ENSTTRG00000014413) #22
Sperm whale	MODERN SPECIES	9	TAF11 (ENSPCTG00005016379)	ANKS1A (ENSPCTG00005016466)	TCP11 (ENSPCTG00005017060)	SCUBE3 (ENSPCTG00005017357)	ZNF76 (ENSPCTG00005017628)	DEF6 (ENSPCTG00005017738)	ENSPCTG00005017863 #12	ENSPCTG00005017905	ARMC12 (ENSPCTG00005017921) #13	CLPSL2 (ENSPCTG00005018045) #14	CLPS (ENSPCTG00005018156) #16	LHFPL5 (ENSPCTG00005018218) #17	SRPK1 (ENSPCTG00005018292) #18	SLC26A8 (ENSPCTG00005018826) #19	MAPK14 (ENSPCTG00005019201) #20	MAPK13 (ENSPCTG00005019360) #22	BRPF3 (ENSPCTG00005019447) #23	BNIP5 (ENSPCTG00005019549) #25	ENSPCTG00005019695 #27	PXT1 (ENSPCTG00005019772) #28	KCTD20 (ENSPCTG00005019825) #29	STK38 (ENSPCTG00005019925) #30	ENSPCTG00005019954	SRSF3 (ENSPCTG00005019964) #31	CDKN1A (ENSPCTG00005019987) #33	RAB44 (ENSPCTG00005020012) #34	PPIL1 (ENSPCTG00005020179) #36	C18H6orf89 (ENSPCTG00005020208) #37	PI16 (ENSPCTG00005020284)	MTCH1 (ENSPCTG00005020330)	FGD2 (ENSPCTG00005020367)
Blue whale	MODERN SPECIES	2	FANCE (ENSBMSG00010009091) #8	ENSBMSG00010009079 #9	ENSBMSG00010009075	TEAD3 (ENSBMSG00010009054) #10	TULP1 (ENSBMSG00010008933) #11	ENSBMSG00010008887	FKBP5 (ENSBMSG00010008874) #12	ARMC12 (ENSBMSG00010008843) #13	CLPSL2 (ENSBMSG00010008833) #14	ENSBMSG00010008821 #15	CLPS (ENSBMSG00010008813) #16	LHFPL5 (ENSBMSG00010011861) #17	SRPK1 (ENSBMSG00010011826) #18	SLC26A8 (ENSBMSG00010011786) #19	MAPK14 (ENSBMSG00010011729) #20	MAPK13 (ENSBMSG00010011678) #22	BRPF3 (ENSBMSG00010011629) #23	PNPLA1 (ENSBMSG00010011594) #24	BNIP5 (ENSBMSG00010011563) #25	ENSBMSG00010011544 #27	PXT1 (ENSBMSG00010011530) #28	KCTD20 (ENSBMSG00010011513) #29	STK38 (ENSBMSG00010011501) #30	ENSBMSG00010011488 #31	ENSBMSG00010011478	CDKN1A (ENSBMSG00010011467) #33	RAB44 (ENSBMSG00010011436) #34	CPNE5 (ENSBMSG00010011395) #35	PPIL1 (ENSBMSG00010011368) #36	C6orf89 (ENSBMSG00010011343) #37	PI16 (ENSBMSG00010011301)
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156819.a.b	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Caniformia	ANCESTRAL SPECIES	3	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Mustelinae	ANCESTRAL SPECIES	65	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00940000154923.C	ENSGT00910000148442	ENSGT00940000155926	ENSGT00940000160370	ENSGT00950000183029.B.c.b.b.a.x	ENSGT00390000011297	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000162601	ENSGT00940000154353.B.`b
American mink	MODERN SPECIES	258	ENSNVIG00000011650	PPARD (ENSNVIG00000011565) #7	FANCE (ENSNVIG00000011523) #8	RPL10A (ENSNVIG00000011502) #9	TEAD3 (ENSNVIG00000011470) #10	TULP1 (ENSNVIG00000011373) #11	FKBP5 (ENSNVIG00000011306) #12	ARMC12 (ENSNVIG00000011265) #13	CLPSL2 (ENSNVIG00000011251) #14	COL (ENSNVIG00000011239) #16	LHFPL5 (ENSNVIG00000011232) #17	SRPK1 (ENSNVIG00000011183) #18	ENSNVIG00000011173	SLC26A8 (ENSNVIG00000011113) #19	MAPK14 (ENSNVIG00000011097) #20	MAPK13 (ENSNVIG00000011071) #22
Ferret	MODERN SPECIES	318	ZNF76 (ENSMPUG00000003522)	DEF6 (ENSMPUG00000003534)	PPARD (ENSMPUG00000003549) #7	FANCE (ENSMPUG00000003560) #8	RPL10A (ENSMPUG00000003568) ##9	TEAD3 (ENSMPUG00000003624) #10	ENSMPUG00000003700	TULP1 (ENSMPUG00000003704) #11	FKBP5 (ENSMPUG00000003749) #12	ARMC12 (ENSMPUG00000003756) #13	CLPS (ENSMPUG00000003780) #16	LHFPL5 (ENSMPUG00000003811) #17	SRPK1 (ENSMPUG00000003819) #18	SLC26A8 (ENSMPUG00000003835) #19	MAPK14 (ENSMPUG00000003927) #20	MAPK13 (ENSMPUG00000004068) #22	BRPF3 (ENSMPUG00000004075) #23	PNPLA1 (ENSMPUG00000004082) #24	ENSMPUG00000004090 #25	ENSMPUG00000004094	ETV7 (ENSMPUG00000004099) #27	ENSMPUG00000004109	COL12A1 (ENSMPUG00000004121)	ENSMPUG00000004149	CD109 (ENSMPUG00000004172)	SLC17A5 (ENSMPUG00000004258)	ENSMPUG00000004271	MTO1 (ENSMPUG00000004323)	CGAS (ENSMPUG00000004335)	ENSMPUG00000004342	OOEP (ENSMPUG00000004352)
Ursidae	ANCESTRAL SPECIES	37	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.n #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Giant Panda	MODERN SPECIES	15	SCUBE3 (ENSAMEG00000000790)	ZNF76 (ENSAMEG00000000752)	DEF6 (ENSAMEG00000000719)	PPARD (ENSAMEG00000000689) #7	FANCE (ENSAMEG00000000684) #8	RPL10A (ENSAMEG00000000670) #9	ENSAMEG00000000624 #10	FKBP5 (ENSAMEG00000000571) #12	ARMC12 (ENSAMEG00000030526) #13	ENSAMEG00000023972 #14	CLPS (ENSAMEG00000000558) #16	LHFPL5 (ENSAMEG00000000553) #17	SRPK1 (ENSAMEG00000000501) #18	SLC26A8 (ENSAMEG00000000483) #19	MAPK14 (ENSAMEG00000000425) #20	MAPK13 (ENSAMEG00000000376) #22	BRPF3 (ENSAMEG00000000336) #23	PNPLA1 (ENSAMEG00000000334) #24	BNIP5 (ENSAMEG00000000331) #25	ETV7 (ENSAMEG00000000317) #27	PXT1 (ENSAMEG00000030183) #28	KCTD20 (ENSAMEG00000000300) #29	STK38 (ENSAMEG00000000274) #30	SRSF3 (ENSAMEG00000000268) #31	CDKN1A (ENSAMEG00000026709) #33	RAB44 (ENSAMEG00000000257) #34	ENSAMEG00000029895	CPNE5 (ENSAMEG00000000216) #35	ENSAMEG00000000213 #36	C6orf89 (ENSAMEG00000001140) #37	PI16 (ENSAMEG00000001128)
Ursus	ANCESTRAL SPECIES	53	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.n #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
American black bear	MODERN SPECIES	1528														SLC26A8 (ENSUAMG00000024684) #19	MAPK14 (ENSUAMG00000024685) #20	MAPK13 (ENSUAMG00000024686) #22	BRPF3 (ENSUAMG00000024687) #23	PNPLA1 (ENSUAMG00000024688) #24	BNIP5 (ENSUAMG00000024689) #25	ETV7 (ENSUAMG00000024690) #27
Polar bear	MODERN SPECIES	184	PPARD (ENSUMAG00000010402) #7	ENSUMAG00000010392	FANCE (ENSUMAG00000010380) #8	RPL10A (ENSUMAG00000010363) #9	TEAD3 (ENSUMAG00000010306) #10	TULP1 (ENSUMAG00000010287) #11	FKBP5 (ENSUMAG00000010276) #12	ARMC12 (ENSUMAG00000010266) #13	CLPSL2 (ENSUMAG00000010262) #14	CLPS (ENSUMAG00000010261) #16	LHFPL5 (ENSUMAG00000010256) #17	SRPK1 (ENSUMAG00000010252) #18	ENSUMAG00000010249	SLC26A8 (ENSUMAG00000010207) #19	MAPK14 (ENSUMAG00000010189) #20	MAPK13 (ENSUMAG00000010150) #22	BRPF3 (ENSUMAG00000010031) #23	PNPLA1 (ENSUMAG00000010016) #24	BNIP5 (ENSUMAG00000010007) #25	ETV7 (ENSUMAG00000010002) #27	PXT1 (ENSUMAG00000009997) #28	KCTD20 (ENSUMAG00000009992) #29	STK38 (ENSUMAG00000009986) #30	SRSF3 (ENSUMAG00000009985) #31	CDKN1A (ENSUMAG00000009980) #33	RAB44 (ENSUMAG00000009974) #34	CPNE5 (ENSUMAG00000009951) #35	PPIL1 (ENSUMAG00000009945) #36	C6orf89 (ENSUMAG00000009943) #37	ENSUMAG00000009937	MTCH1 (ENSUMAG00000009928)
Canidae	ANCESTRAL SPECIES	6	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00550000074855.v.a.a	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Red fox	MODERN SPECIES	7	ZNF76 (ENSVVUG00000026174)	DEF6 (ENSVVUG00000026176)	PPARD (ENSVVUG00000026179) #7	FANCE (ENSVVUG00000026181) #8	ENSVVUG00000026182 #9	TEAD3 (ENSVVUG00000026184) #10	TULP1 (ENSVVUG00000026187) #11	FKBP5 (ENSVVUG00000026191) #12	ARMC12 (ENSVVUG00000026193) #13	CLPSL2 (ENSVVUG00000026194) #14	LHFPL5 (ENSVVUG00000026195) #17	CLPS (ENSVVUG00000026196) #16	SRPK1 (ENSVVUG00000026197) #18	SLC26A8 (ENSVVUG00000026199) #19	MAPK14 (ENSVVUG00000026201) #20	MAPK13 (ENSVVUG00000026203) #22	BRPF3 (ENSVVUG00000026204) #23	PNPLA1 (ENSVVUG00000026207) #24	BNIP5 (ENSVVUG00000026209) #25	ETV7 (ENSVVUG00000026211) #27	PXT1 (ENSVVUG00000026213) #28	ENSVVUG00000026217	KCTD20 (ENSVVUG00000026218) #29	STK38 (ENSVVUG00000026226) #30	SRSF3 (ENSVVUG00000026359) #31	CDKN1A (ENSVVUG00000026363) #33	RAB44 (ENSVVUG00000026366) #34	CPNE5 (ENSVVUG00000026373) #35	PPIL1 (ENSVVUG00000026380) #36	CUNH6orf89 (ENSVVUG00000026386) #37	PI16 (ENSVVUG00000026401)
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00550000074855.v.a.a	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h.i #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Dog	MODERN SPECIES	3	PPARD (ENSCAFG00845028955) #7	FANCE (ENSCAFG00845006312) #8	RPL10A (ENSCAFG00845006364) #9	TEAD3 (ENSCAFG00845006407) #10	TULP1 (ENSCAFG00845006584) #11	ENSCAFG00845006823	ENSCAFG00845006865 #12	ENSCAFG00845006891 #12	ARMC12 (ENSCAFG00845006948) #13	CLPSL2 (ENSCAFG00845006989) #14	CLPS (ENSCAFG00845007025) #16	LHFPL5 (ENSCAFG00845007108) #17	SRPK1 (ENSCAFG00845007276) #18	SLC26A8 (ENSCAFG00845007666) #19	MAPK14 (ENSCAFG00845008249) #20	MAPK14 (ENSCAFG00845008508) #22	BRPF3 (ENSCAFG00845008645) #23	PNPLA1 (ENSCAFG00845008874) #24	BNIP5 (ENSCAFG00845008912) #25	ETV7 (ENSCAFG00845009107) #27	PXT1 (ENSCAFG00845009357) #28	ENSCAFG00845009388	KCTD20 (ENSCAFG00845009418) #29	ENSCAFG00845009463 #30	SRSF3 (ENSCAFG00845009568) #31	ENSCAFG00845009606 #33	RAB44 (ENSCAFG00845009631) #34	CPNE5 (ENSCAFG00845009729) #35	PPIL1 (ENSCAFG00845009972) #36	C12H6orf89 (ENSCAFG00845010058) #37	PI16 (ENSCAFG00845010154)
Dingo	MODERN SPECIES	276	ZNF76 (ENSCAFG00020006995)	DEF6 (ENSCAFG00020007011)	PPARD (ENSCAFG00020007019) #7	FANCE (ENSCAFG00020007027) #8	ENSCAFG00020007031 ##9	TEAD3 (ENSCAFG00020007039) #10	TULP1 (ENSCAFG00020007044) #11	FKBP5 (ENSCAFG00020007094) #12	ARMC12 (ENSCAFG00020007104) #13	CLPSL2 (ENSCAFG00020007116) #14	CLPS (ENSCAFG00020007125) #16	LHFPL5 (ENSCAFG00020007127) #17	SRPK1 (ENSCAFG00020007137) #18	SLC26A8 (ENSCAFG00020007158) #19	MAPK14 (ENSCAFG00020007162) #20	MAPK13 (ENSCAFG00020007173) #22	BRPF3 (ENSCAFG00020007188) #23	ENSCAFG00020007208 #23	PNPLA1 (ENSCAFG00020007210) #24	BNIP5 (ENSCAFG00020007215) #25	ETV7 (ENSCAFG00020007218) #27	PXT1 (ENSCAFG00020007228) #28	ENSCAFG00020007232	KCTD20 (ENSCAFG00020007237) #29	ENSCAFG00020007249 #30	SRSF3 (ENSCAFG00020007292) #31	CDKN1A (ENSCAFG00020007295) #33	RAB44 (ENSCAFG00020007300) #34	CPNE5 (ENSCAFG00020007308) #35	PPIL1 (ENSCAFG00020007325) #36	C6orf89 (ENSCAFG00020007329) #37
Felidae	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156819.a.b	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Cat	MODERN SPECIES	236	DEF6 (ENSFCAG00000005895)	PPARD (ENSFCAG00000025234) #7	FANCE (ENSFCAG00000012902) #8	RPL10A (ENSFCAG00000012904) #9	TEAD3 (ENSFCAG00000012905) #10	TULP1 (ENSFCAG00000012907) #11	FKBP5 (ENSFCAG00000031002) #12	ARMC12 (ENSFCAG00000032771) #13	CLPSL2 (ENSFCAG00000044382) #14	ENSFCAG00000048579	CLPS (ENSFCAG00000044769) #16	LHFPL5 (ENSFCAG00000037353) #17	SRPK1 (ENSFCAG00000026404) #18	SLC26A8 (ENSFCAG00000014824) #19	MAPK14 (ENSFCAG00000027782) #20	MAPK13 (ENSFCAG00000001747) #22	BRPF3 (ENSFCAG00000001748) #23	PNPLA1 (ENSFCAG00000001750) #24	BNIP5 (ENSFCAG00000001752) #25	ETV7 (ENSFCAG00000001082) #27	ENSFCAG00000035650	KCTD20 (ENSFCAG00000023163) #29	STK38 (ENSFCAG00000018473) #30	ENSFCAG00000001084 #31	CDKN1A (ENSFCAG00000027886) #33	RAB44 (ENSFCAG00000023379) #34	CPNE5 (ENSFCAG00000001089) #35	PPIL1 (ENSFCAG00000034797) #36	CB2H6orf89 (ENSFCAG00000001091) #37	PI16 (ENSFCAG00000028703)	MTCH1 (ENSFCAG00000001093)
Panthera	ANCESTRAL SPECIES	7	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156819.a.b	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Tiger	MODERN SPECIES	220	SCUBE3 (ENSPTIG00000011959)	ZNF76 (ENSPTIG00000010061)	DEF6 (ENSPTIG00000007928)	PPARD (ENSPTIG00000006427) #7	FANCE (ENSPTIG00000005820) #8	RPL10A (ENSPTIG00000005442) #9	TEAD3 (ENSPTIG00000021287) #10	TULP1 (ENSPTIG00000020692) #11	FKBP5 (ENSPTIG00000019998) #12	ARMC12 (ENSPTIG00000019598) #13	CLPS (ENSPTIG00000019273) #16	LHFPL5 (ENSPTIG00000019186) #17	SRPK1 (ENSPTIG00000016614) #18	SLC26A8 (ENSPTIG00000013528) #19	MAPK14 (ENSPTIG00000011843) #20	MAPK13 (ENSPTIG00000009812) #22	BRPF3 (ENSPTIG00000006629) #23	PNPLA1 (ENSPTIG00000022017) #24	BNIP5 (ENSPTIG00000021932) #25	ETV7 (ENSPTIG00000021767) #27	PXT1 (ENSPTIG00000021668) #28	ENSPTIG00000004591	KCTD20 (ENSPTIG00000021203) #29	STK38 (ENSPTIG00000020175) #30	SRSF3 (ENSPTIG00000019446) #31	CDKN1A (ENSPTIG00000019178) #33	RAB44 (ENSPTIG00000017870) #34	CPNE5 (ENSPTIG00000015366) #35	PPIL1 (ENSPTIG00000015004) #36	C6orf89 (ENSPTIG00000014042) #37	PI16 (ENSPTIG00000013417)
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156819.a.b	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
leopard	MODERN SPECIES	30	SCUBE3 (ENSPPRG00000023073)	ZNF76 (ENSPPRG00000021755)	DEF6 (ENSPPRG00000017932)	PPARD (ENSPPRG00000016019) #7	FANCE (ENSPPRG00000013287) #8	RPL10A (ENSPPRG00000013138) #9	TEAD3 (ENSPPRG00000012932) #10	TULP1 (ENSPPRG00000010887) #11	FKBP5 (ENSPPRG00000008864) #12	ARMC12 (ENSPPRG00000007486) #13	CLPS (ENSPPRG00000006769) #16	LHFPL5 (ENSPPRG00000006583) #17	SRPK1 (ENSPPRG00000006274) #18	SLC26A8 (ENSPPRG00000004024) #19	MAPK14 (ENSPPRG00000002933) #20	MAPK13 (ENSPPRG00000002068) #22	BRPF3 (ENSPPRG00000000401) #23	PNPLA1 (ENSPPRG00000022904) #24	BNIP5 (ENSPPRG00000020238) #25	ETV7 (ENSPPRG00000016205) #27	PXT1 (ENSPPRG00000015453) #28	KCTD20 (ENSPPRG00000014158) #29	STK38 (ENSPPRG00000012797) #30	ENSPPRG00000012493 #31	CDKN1A (ENSPPRG00000011957) #33	RAB44 (ENSPPRG00000011437) #34	CPNE5 (ENSPPRG00000009095) #35	PPIL1 (ENSPPRG00000006635) #36	C6orf89 (ENSPPRG00000006233) #37	PI16 (ENSPPRG00000005249)	MTCH1 (ENSPPRG00000004731)
lion	MODERN SPECIES	5	DEF6 (ENSPLOG00000013958)	PPARD (ENSPLOG00000014014) #7	FANCE (ENSPLOG00000014168) #8	RPL10A (ENSPLOG00000014251) #9	TEAD3 (ENSPLOG00000014338) #10	TULP1 (ENSPLOG00000014616) #11	FKBP5 (ENSPLOG00000015056) #12	ARMC12 (ENSPLOG00000015132) #13	CLPSL2 (ENSPLOG00000015301) #14	ENSPLOG00000015345 #15	CLPS (ENSPLOG00000015406) #16	LHFPL5 (ENSPLOG00000015492) #17	SRPK1 (ENSPLOG00000015544) #18	SLC26A8 (ENSPLOG00000015821) #19	MAPK14 (ENSPLOG00000015927) #20	MAPK13 (ENSPLOG00000016263) #22	BRPF3 (ENSPLOG00000016459) #23	PNPLA1 (ENSPLOG00000016552) #24	BNIP5 (ENSPLOG00000016630) #25	ENSPLOG00000016774 #27	PXT1 (ENSPLOG00000000315) #28	KCTD20 (ENSPLOG00000000347) #29	STK38 (ENSPLOG00000000375) #30	SRSF3 (ENSPLOG00000000404) #31	CDKN1A (ENSPLOG00000000421) #33	RAB44 (ENSPLOG00000000433) #34	ENSPLOG00000000452	CPNE5 (ENSPLOG00000000475) #35	PPIL1 (ENSPLOG00000000515) #36	C6orf89 (ENSPLOG00000000558) #37	PI16 (ENSPLOG00000000609)
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156819.a.b	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37
Equus	ANCESTRAL SPECIES	10	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00510000049845 #15	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a.q.b #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156819.a.b	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458
Donkey	MODERN SPECIES	28	ENSEASG00005031872	FANCE (ENSEASG00005021199) #8	ENSEASG00005021203	RPL10A (ENSEASG00005021204) #9	TEAD3 (ENSEASG00005021216) #10	TULP1 (ENSEASG00005021232) #11	FKBP5 (ENSEASG00005021242) #12	ARMC12 (ENSEASG00005021247) #13	CLPSL2 (ENSEASG00005035770) #14	ENSEASG00005021252 #15	CLPS (ENSEASG00005038646) #16	LHFPL5 (ENSEASG00005021258) #17	SRPK1 (ENSEASG00005021262) #18	SLC26A8 (ENSEASG00005021272) #19	MAPK14 (ENSEASG00005021290) #20	MAPK13 (ENSEASG00005028422) #22	BRPF3 (ENSEASG00005021301) #23	PNPLA1 (ENSEASG00005021307) #24	BNIP5 (ENSEASG00005021313) #25	ETV7 (ENSEASG00005021318) #27	STK38 (ENSEASG00005021330) #30	KCTD20 (ENSEASG00005021324) #29	ENSEASG00005024991 #31	ENSEASG00005030151 #33	RAB44 (ENSEASG00005021342) #34	ENSEASG00005021346	CPNE5 (ENSEASG00005021349) #35	PPIL1 (ENSEASG00005021354) #36	C6orf89 (ENSEASG00005021359) #37	PI16 (ENSEASG00005021366)	MTCH1 (ENSEASG00005021370)
Horse	MODERN SPECIES	12	DEF6 (ENSECAG00000022088)	PPARD (ENSECAG00000008227) #7	ENSECAG00000043329	FANCE (ENSECAG00000013190) #8	RPL10A (ENSECAG00000014090) #9	TULP1 (ENSECAG00000007517) #11	FKBP5 (ENSECAG00000011304) #12	ENSECAG00000053155	ARMC12 (ENSECAG00000011493) #13	CLPSL2 (ENSECAG00000043440) #14	CLPS (ENSECAG00000012160) #16	LHFPL5 (ENSECAG00000014034) #17	SRPK1 (ENSECAG00000014213) #18	SLC26A8 (ENSECAG00000000493) #19	MAPK14 (ENSECAG00000014175) #20	MAPK13 (ENSECAG00000030024) #22	BRPF3 (ENSECAG00000005945) #23	PNPLA1 (ENSECAG00000012343) #24	BNIP5 (ENSECAG00000013634) #25	ETV7 (ENSECAG00000014519) #27	PXT1 (ENSECAG00000016858) #28	KCTD20 (ENSECAG00000017166) #29	STK38 (ENSECAG00000018553) #30	SRSF3 (ENSECAG00000018741) #31	CDKN1A (ENSECAG00000021543) #33	RAB44 (ENSECAG00000000519) #34	CPNE5 (ENSECAG00000008178) #35	PPIL1 (ENSECAG00000022373) #36	C20H6orf89 (ENSECAG00000024122) #37	PI16 (ENSECAG00000024845)	MTCH1 (ENSECAG00000024883)
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00400000022846	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Megabat	MODERN SPECIES	3221										ENSPVAG00000014970	CLPS (ENSPVAG00000014973) #16	LHFPL5 (ENSPVAG00000014974) #17	SRPK1 (ENSPVAG00000014976) #18	SLC26A8 (ENSPVAG00000014977) #19	MAPK14 (ENSPVAG00000014978) #20	MAPK13 (ENSPVAG00000014979) #22
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.b #9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Greater horseshoe bat	MODERN SPECIES	21	DEF6 (ENSRFEG00010019383)	PPARD (ENSRFEG00010019439) #7	FANCE (ENSRFEG00010019502) #8	ENSRFEG00010019551 #9	TEAD3 (ENSRFEG00010019591) #10	TULP1 (ENSRFEG00010019664) #11	ENSRFEG00010019994	FKBP5 (ENSRFEG00010020019) #12	ARMC12 (ENSRFEG00010020075) #13	CLPSL2 (ENSRFEG00010020118) #14	CLPS (ENSRFEG00010020142) #16	LHFPL5 (ENSRFEG00010020200) #17	SRPK1 (ENSRFEG00010020229) #18	SLC26A8 (ENSRFEG00010020412) #19	ENSRFEG00010020448 #20	MAPK13 (ENSRFEG00010020524) #22	BRPF3 (ENSRFEG00010020671) #23	PNPLA1 (ENSRFEG00010020753) #24	BNIP5 (ENSRFEG00010020784) #25	ETV7 (ENSRFEG00010020844) #27	PXT1 (ENSRFEG00010020911) #28	ENSRFEG00010020924	KCTD20 (ENSRFEG00010020936) #29	STK38 (ENSRFEG00010020970) #30	SRSF3 (ENSRFEG00010020983) #31	CDKN1A (ENSRFEG00010021000) #33	RAB44 (ENSRFEG00010021014) #34	CPNE5 (ENSRFEG00010000192) #35	PPIL1 (ENSRFEG00010000231) #36	C6orf89 (ENSRFEG00010000262) #37	PI16 (ENSRFEG00010000311)
Microbat	MODERN SPECIES	1284	SCUBE3 (ENSMLUG00000008561)	ZNF76 (ENSMLUG00000008610)	DEF6 (ENSMLUG00000008624)	PPARD (ENSMLUG00000010594) #7	ENSMLUG00000023455	ENSMLUG00000024807	FKBP5 (ENSMLUG00000011255) #12	ARMC12 (ENSMLUG00000005100) #13	ENSMLUG00000022424	ENSMLUG00000010934 #15	CLPS (ENSMLUG00000010948) #16	LHFPL5 (ENSMLUG00000010960) #17	SRPK1 (ENSMLUG00000010974) #18	SLC26A8 (ENSMLUG00000003668) #19	MAPK14 (ENSMLUG00000005967) #20	ENSMLUG00000024504 #22	BRPF3 (ENSMLUG00000002418) #23	PNPLA1 (ENSMLUG00000000853) #24	BNIP5 (ENSMLUG00000000855) #25	ENSMLUG00000000866 #27	KCTD20 (ENSMLUG00000007139) #29	STK38 (ENSMLUG00000007149) #30
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00390000008767.a.a.a.a ##9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Xenarthra	ANCESTRAL SPECIES	246				ENSGT00940000156676 #7	ENSGT00390000008767.a.a.b ##9	ENSGT00950000182956.a ##10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24
Armadillo	MODERN SPECIES	1545				PPARD (ENSDNOG00000038434) #7	RPL10A (ENSDNOG00000046031) ##9	ENSDNOG00000023623 ##10	TULP1 (ENSDNOG00000047278) #11	FKBP5 (ENSDNOG00000004678) #12	ARMC12 (ENSDNOG00000035258) #13	ENSDNOG00000040414 #14	CLPS (ENSDNOG00000044882) #16	LHFPL5 (ENSDNOG00000043114) #17	SRPK1 (ENSDNOG00000015578) #18	SLC26A8 (ENSDNOG00000015584) #19	MAPK14 (ENSDNOG00000032651) #20	MAPK13 (ENSDNOG00000033496) #22	BRPF3 (ENSDNOG00000009698) #23	PNPLA1 (ENSDNOG00000032712) #24
Afrotheria	ANCESTRAL SPECIES	24								ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Afrotheria_a	ANCESTRAL SPECIES	23								ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000011494 #14	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000012893 #28	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000162458	ENSGT00390000000020.a
Elephant	MODERN SPECIES	1							ENSLAFG00000031139	FKBP5 (ENSLAFG00000004217) #12	ARMC12 (ENSLAFG00000032578) #13	ENSLAFG00000000454 #14	CLPS (ENSLAFG00000023029) #16	LHFPL5 (ENSLAFG00000000101) #17	SRPK1 (ENSLAFG00000000102) #18	SLC26A8 (ENSLAFG00000005125) #19	MAPK14 (ENSLAFG00000005132) #20	MAPK13 (ENSLAFG00000005137) #22	ENSLAFG00000027631	BRPF3 (ENSLAFG00000021668) #23	PNPLA1 (ENSLAFG00000009711) #24	BNIP5 (ENSLAFG00000009715) #25	ETV7 (ENSLAFG00000003568) #27	PXT1 (ENSLAFG00000029685) #28	KCTD20 (ENSLAFG00000005607) #29	STK38 (ENSLAFG00000005611) #30	ENSLAFG00000018193 #31	CDKN1A (ENSLAFG00000009778) #33	ENSLAFG00000000202 #34	ENSLAFG00000028599	CPNE5 (ENSLAFG00000000204) #35	PPIL1 (ENSLAFG00000028161) #36	C6orf89 (ENSLAFG00000000208) #37
Hyrax	MODERN SPECIES	1057														SLC26A8 (ENSPCAG00000016221) #19	MAPK14 (ENSPCAG00000016343) #20	MAPK13 (ENSPCAG00000016392) #22
Tenrec	MODERN SPECIES	4904																MAPK13 (ENSETEG00000020162) #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.b ##9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000163908	ENSGT00390000000020.a	ENSGT00940000161251
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.b ##9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000163908	ENSGT00390000000020.a	ENSGT00940000161251
Diprotodontia	ANCESTRAL SPECIES	44	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.b ##9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000163908	ENSGT00390000000020.a	ENSGT00940000161251
Diprotodontia_a	ANCESTRAL SPECIES	49	ENSGT00940000153185.a.a.b	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.b ##9	ENSGT00950000182956.b.b.b #10	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160828 #24	ENSGT00390000001176 #25	ENSGT00940000162211 #27	ENSGT00390000007975.b #29	ENSGT00940000153544.a.h #30	ENSGT00910000144115.a #31	ENSGT00940000159918.a.b #33	ENSGT00940000160379 #34	ENSGT00940000156194 #35	ENSGT00940000153189.C #36	ENSGT00390000014270 #37	ENSGT00940000163908	ENSGT00390000000020.a.a	ENSGT00940000161251
Common wonbat	MODERN SPECIES	1047	ENSVURG00010018893	ZNF76 (ENSVURG00010018901)	DEF6 (ENSVURG00010018912)	PPARD (ENSVURG00010018918) #7	ENSVURG00010018922	ENSVURG00010018929 #8	RPL10A (ENSVURG00010018942) ##9	TEAD3 (ENSVURG00010018988) #10	ENSVURG00010019006	FKBP5 (ENSVURG00010019051) #12	CLPS (ENSVURG00010019069) #16	LHFPL5 (ENSVURG00010019075) #17	SRPK1 (ENSVURG00010019087) #18	SLC26A8 (ENSVURG00010019133) #19	MAPK14 (ENSVURG00010019236) #20	MAPK13 (ENSVURG00010019265) #22	BRPF3 (ENSVURG00010019287) #23	PNPLA1 (ENSVURG00010019313) #24	ENSVURG00010019331 #25	ETV7 (ENSVURG00010019335) #27	KCTD20 (ENSVURG00010019344) #29	STK38 (ENSVURG00010019351) #30	SRSF3 (ENSVURG00010019365) #31	CDKN1A (ENSVURG00010019395) #33	ENSVURG00010019378 #34	CPNE5 (ENSVURG00010019407) #35	ENSVURG00010019436 #37	ENSVURG00010019439	ENSVURG00010019449	FGD2 (ENSVURG00010019509)	PIM1 (ENSVURG00010019521)
koala	MODERN SPECIES	76	SCUBE3 (ENSPCIG00000003800)	ZNF76 (ENSPCIG00000021233)	DEF6 (ENSPCIG00000021237)	PPARD (ENSPCIG00000021240) #7	ENSPCIG00000021244	ENSPCIG00000021248 #8	ENSPCIG00000021251 ##9	TEAD3 (ENSPCIG00000021255) #10	FKBP5 (ENSPCIG00000021261) #12	ARMC12 (ENSPCIG00000030892) #13	CLPS (ENSPCIG00000021270) #16	LHFPL5 (ENSPCIG00000021272) #17	SRPK1 (ENSPCIG00000021278) #18	ENSPCIG00000021291 #19	MAPK14 (ENSPCIG00000021301) #20	MAPK13 (ENSPCIG00000021308) #22	ENSPCIG00000021314 #23	ENSPCIG00000032311 #23	ENSPCIG00000021319 #24	ENSPCIG00000021323 #25	ETV7 (ENSPCIG00000021325) #27	KCTD20 (ENSPCIG00000021330) #29	STK38 (ENSPCIG00000021332) #30	ENSPCIG00000021335 #31	CDKN1A (ENSPCIG00000021337) #33	ENSPCIG00000030790 #34	ENSPCIG00000021340	CPNE5 (ENSPCIG00000021342) #35	PPIL1 (ENSPCIG00000021347) #36	ENSPCIG00000021350 #37	ENSPCIG00000003249
Wallaby	MODERN SPECIES	13622																MAPK13 (ENSMEUG00000000394) #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000007929	SCUBE3 (ENSSHAG00000009564)	ENSSHAG00000010104	PPARD (ENSSHAG00000027880) #7	ENSSHAG00000011018 #8	RPL10A (ENSSHAG00000030402) ##9	TEAD3 (ENSSHAG00000011218) #10	TULP1 (ENSSHAG00000011434) #11	FKBP5 (ENSSHAG00000011819) #12	ARMC12 (ENSSHAG00000012640) #13	CLPS (ENSSHAG00000029496) #16	LHFPL5 (ENSSHAG00000012839) #17	SRPK1 (ENSSHAG00000030643) #18	ENSSHAG00000012955 #19	MAPK14 (ENSSHAG00000001726) #20	MAPK13 (ENSSHAG00000005652) #22	BRPF3 (ENSSHAG00000006679) #23	PNPLA1 (ENSSHAG00000026837) #24	ETV7 (ENSSHAG00000008985) #27	KCTD20 (ENSSHAG00000009892) #29	STK38 (ENSSHAG00000010192) #30	SRSF3 (ENSSHAG00000028024) #31	CDKN1A (ENSSHAG00000027220) #33	ENSSHAG00000030398 #34	CPNE5 (ENSSHAG00000012120) #35	PPIL1 (ENSSHAG00000029952) #36	ENSSHAG00000013471 #37	ENSSHAG00000013929	ENSSHAG00000001057	ENSSHAG00000022544	ENSSHAG00000023399
Opossum	MODERN SPECIES	1	PPARD (ENSMODG00000013778) #7	ENSMODG00000050582	ENSMODG00000013771 #8	ENSMODG00000013766 ##9	TEAD3 (ENSMODG00000013762) #10	TULP1 (ENSMODG00000013758) #11	FKBP5 (ENSMODG00000013757) #12	ARMC12 (ENSMODG00000013752) #13	CLPS (ENSMODG00000013747) #16	ENSMODG00000046296	ENSMODG00000028226	LHFPL5 (ENSMODG00000013743) #17	SRPK1 (ENSMODG00000013740) #18	ENSMODG00000013715 #19	MAPK14 (ENSMODG00000013704) #20	MAPK13 (ENSMODG00000013669) #22	BRPF3 (ENSMODG00000013652) #23	ENSMODG00000023723	ENSMODG00000013624	PNPLA1 (ENSMODG00000013586) #24	ENSMODG00000031755 #25	ETV7 (ENSMODG00000013561) #27	ENSMODG00000048529	KCTD20 (ENSMODG00000013553) #29	ENSMODG00000013550 ##30	SRSF3 (ENSMODG00000013539) #31	CDKN1A (ENSMODG00000013527) #33	ENSMODG00000038495 #34	ENSMODG00000023720	CPNE5 (ENSMODG00000013517) #35	PPIL1 (ENSMODG00000013502) #36
Platypus	MODERN SPECIES	18	NUDT3 (ENSOANG00000000127)	RPS10 (ENSOANG00000012677)	PACSIN1 (ENSOANG00000041042)	SPDEF (ENSOANG00000050028)	ILRUN (ENSOANG00000005979)	SNRPC (ENSOANG00000003405)	BLTP3A (ENSOANG00000049312)	ENSOANG00000013388	ANKS1A (ENSOANG00000038289)	ENSOANG00000008792	ENSOANG00000007040	CLPS (ENSOANG00000048366) #16	LHFPL5 (ENSOANG00000046683) #17	SRPK1 (ENSOANG00000000448) #18	ENSOANG00000009985 #19	MAPK13 (ENSOANG00000042195) #22	BRPF3 (ENSOANG00000002329) #23	TBC1D22B (ENSOANG00000001766)	ENSOANG00000041743	PIM1 (ENSOANG00000050736)	ENSOANG00000041121	MTCH1 (ENSOANG00000006357)	ENSOANG00000028825	ENSOANG00000015027 #37	PPIL1 (ENSOANG00000045861) #36	CPNE5 (ENSOANG00000039424) #35	ENSOANG00000038722 #34	ENSOANG00000042080 #33	SRSF3 (ENSOANG00000020536) #31	STK38 (ENSOANG00000049988) #30	KCTD20 (ENSOANG00000042913) #29
Sauria	ANCESTRAL SPECIES	24	ENSGT00390000000705 #8	ENSGT00390000008767.d #9	ENSGT00940000159117	ENSGT00940000177211	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00440000033504.C	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695
Lepidosauria	ANCESTRAL SPECIES	56	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.c.a #9	ENSGT00390000008767.d #9	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00940000169569	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29
Episquamata	ANCESTRAL SPECIES	1	ENSGT01050000244888.a.b	ENSGT00940000154102.a	ENSGT00940000159650	ENSGT00940000158289.b	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856.d #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00390000003856.c #13	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00940000169569	ENSGT00940000153544.a #30
Laterata	ANCESTRAL SPECIES	3	ENSGT00940000154102.a	ENSGT00940000159650	ENSGT00940000158289.b	ENSGT00940000160828.b #24	ENSGT00390000008767.d #9	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856.d #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00390000003856.c #13	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00940000169569	ENSGT00940000153544.a #30
Common wall lizard	MODERN SPECIES	14	KIF21B (ENSPMRG00000013168)	CACNA1S (ENSPMRG00000015008)	ENSPMRG00000015109 #24	RPL10A (ENSPMRG00000015118) #9	ENSPMRG00000015124	MICAL1 (ENSPMRG00000015132)	SMPD2 (ENSPMRG00000015145)	TEAD3 (ENSPMRG00000015154) #10	TULP1 (ENSPMRG00000015179) #11	FKBP5 (ENSPMRG00000015186) #12	ENSPMRG00000015188 #13	CLPS (ENSPMRG00000015194) #16	LHFPL5 (ENSPMRG00000015196) #17	SRPK1 (ENSPMRG00000015202) #18	MAPK14 (ENSPMRG00000015221) #20	MAPK13 (ENSPMRG00000015235) #22	BRPF3 (ENSPMRG00000015249) #23	ENSPMRG00000015264 #13	ENSPMRG00000015269	ENSPMRG00000015278	TBC1D22B (ENSPMRG00000015283)	ENSPMRG00000015292	PIM1 (ENSPMRG00000007119)	ENSPMRG00000007126	FGD2 (ENSPMRG00000007131)	MTCH1 (ENSPMRG00000007144)	ENSPMRG00000007156	C6orf89 (ENSPMRG00000007169) #37	ENSPMRG00000007177 #34	CDKN1A (ENSPMRG00000007192) #33	SRSF3 (ENSPMRG00000007199) #31
Argentine black and white tegu	MODERN SPECIES	16	INAVA (ENSSMRG00000018506)	KIF21B (ENSSMRG00000018511)	CACNA1S (ENSSMRG00000018566)	ENSSMRG00000020955 #24	RPL10A (ENSSMRG00000020986) #9	MICAL1 (ENSSMRG00000020988)	SMPD2 (ENSSMRG00000020989)	TEAD3 (ENSSMRG00000020990) #10	TULP1 (ENSSMRG00000020993) #11	FKBP5 (ENSSMRG00000020995) #12	ENSSMRG00000020996 #13	CLPS (ENSSMRG00000020997) #16	LHFPL5 (ENSSMRG00000020998) #17	SRPK1 (ENSSMRG00000020999) #18	MAPK14 (ENSSMRG00000021000) #20	MAPK13 (ENSSMRG00000021001) #22	BRPF3 (ENSSMRG00000021002) #23	ENSSMRG00000021003 #13	ENSSMRG00000021004	TBC1D22B (ENSSMRG00000021005)	ENSSMRG00000021007	PIM1 (ENSSMRG00000021008)	ENSSMRG00000021011	MTCH1 (ENSSMRG00000021012)	ENSSMRG00000021013	C6orf89 (ENSSMRG00000021014) #37	CDKN1A (ENSSMRG00000021015) #33	SRSF3 (ENSSMRG00000021016) #31	ENSSMRG00000021017	STK38 (ENSSMRG00000021018) #30	KCTD20 (ENSSMRG00000021019) #29
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000160828.a #24	ENSGT00940000160828.b #24	ENSGT00390000008767.d #9	ENSGT00530000063722.a	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856.d #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00390000003856.c #13	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29
Elapidae	ANCESTRAL SPECIES	1	ENSGT00940000154102.a	ENSGT00940000159650.o	ENSGT00940000158289.b	ENSGT00390000008767.d #9	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856.d #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.w.a #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00390000003856.c #13	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a.x.a	ENSGT00950000185014	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b.a.a #33	ENSGT00910000144115.a #31	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29
Elapidae_a	DUPLICATION
Elapidae_a	ANCESTRAL SPECIES	57	ENSGT00940000154102.a	ENSGT00940000159650.o	ENSGT00940000158289.b	ENSGT00390000008767.d #9	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856.d #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.w.a #18	ENSGT00940000155325 #20	ENSGT00940000159584.a #22	ENSGT00940000159584.b #22	ENSGT00940000155056 #23	ENSGT00390000003856.c #13	ENSGT00940000160682.a.h	ENSGT00940000160682.a.g	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a.x.a	ENSGT00950000185014	ENSGT00390000014270 #37	ENSGT00940000159918.a.b.a.a #33	ENSGT00910000144115.a #31	ENSGT00940000153544.a.a #30
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT01050000244888.a.b	ENSGT00940000154102.a	ENSGT00940000159650.o	ENSGT00940000158289.b	ENSGT00390000008767.d #9	ENSGT00940000159117.h	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856.d #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.w.a #18	ENSGT00940000155325 #20	ENSGT00940000159584.a #22	ENSGT00940000155056 #23	ENSGT00390000003856.c #13	ENSGT00940000160682.a.g.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a.x.a	ENSGT00950000185014	ENSGT00390000014270 #37	ENSGT00940000159918.a.b.a.a #33	ENSGT00910000144115.a #31	ENSGT00940000153544.a.a #30	ENSGT00390000007975.b #29	ENSGT00940000162211 #27
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	102	ENSPTXG00000008759	ENSPTXG00000008758	ENSPTXG00000008756	ENSPTXG00000007819	ENSPTXG00000007793 #9	ENSPTXG00000007786	ENSPTXG00000007782	ENSPTXG00000007772 #10	ENSPTXG00000007767 #11	ENSPTXG00000007758 #12	ENSPTXG00000007757 #13	ENSPTXG00000007748 #16	ENSPTXG00000007746 #17	ENSPTXG00000007745 #18	ENSPTXG00000007743 #20	ENSPTXG00000007741 #22	ENSPTXG00000007739 #23	ENSPTXG00000007734 #13	ENSPTXG00000007731	ENSPTXG00000007727	ENSPTXG00000010687	ENSPTXG00000010683	ENSPTXG00000010682	ENSPTXG00000010592	ENSPTXG00000010590	ENSPTXG00000010586	ENSPTXG00000010584 #37	ENSPTXG00000010583 #33	ENSPTXG00000010582 #31	ENSPTXG00000010581 #30	ENSPTXG00000010577 #29
Eastern brown snake	MODERN SPECIES	88	ENSPTXG00000018496	ENSPTXG00000018492	ENSPTXG00000018491	ENSPTXG00000014985	ENSPTXG00000014966 #9	ENSPTXG00000014964	ENSPTXG00000014963	ENSPTXG00000014962 #10	ENSPTXG00000019193 #11	ENSPTXG00000019192 #12	ENSPTXG00000019190 #13	ENSPTXG00000019189 #16	ENSPTXG00000019188 #17	ENSPTXG00000019186 #18	ENSPTXG00000019183 #20	ENSPTXG00000019180 #22	ENSPTXG00000019178 #23	ENSPTXG00000019175 #13	ENSPTXG00000019173	ENSPTXG00000019171	ENSPTXG00000019169	ENSPTXG00000019168	ENSPTXG00000019165	ENSPTXG00000019161	ENSPTXG00000019157	ENSPTXG00000019155 #37	ENSPTXG00000019154 #33	ENSPTXG00000019152 #31	ENSPTXG00000019150 #30	ENSPTXG00000019149 #29	ENSPTXG00000019148 #27
Blue-lipped sea krait	MODERN SPECIES	9798															MAPK14 (ENSLLTG00000009996) #20	ENSLLTG00000010360 #22
Elapidae_a	ANCESTRAL SPECIES	57	ENSGT00940000159650.o	ENSGT00940000158289.b	ENSGT00390000008767.d #9	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856.d #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.w.a #18	ENSGT00940000155325 #20	ENSGT00940000159584.a #22	ENSGT00940000159584.b #22	ENSGT00940000155056 #23	ENSGT00390000003856.c #13	ENSGT00940000160682.a.h	ENSGT00940000160682.a.g	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a.x.a	ENSGT00950000185014	ENSGT00390000014270 #37	ENSGT00940000159918.a.b.a.a #33	ENSGT00910000144115.a #31	ENSGT00940000153544.a.a #30	ENSGT00960000191064
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000159584.b #22
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	97	ENSNSUG00000001097	ENSNSUG00000001158 #9	ENSNSUG00000001162	ENSNSUG00000001163	ENSNSUG00000001165	ENSNSUG00000001172 #10	ENSNSUG00000001269 #11	ENSNSUG00000001273 #12	ENSNSUG00000001297 #13	ENSNSUG00000001301 #16	ENSNSUG00000001316 #17	ENSNSUG00000001318 #18	ENSNSUG00000001357 #18	ENSNSUG00000001438 #20	ENSNSUG00000001439 #20	ENSNSUG00000001441 #22	ENSNSUG00000001456 #23	ENSNSUG00000001465 #23	ENSNSUG00000001467 #13	ENSNSUG00000001472	ENSNSUG00000001482	ENSNSUG00000001795	ENSNSUG00000001796	ENSNSUG00000001828	ENSNSUG00000001890	ENSNSUG00000001912	ENSNSUG00000001914 #37	ENSNSUG00000001918 #33	ENSNSUG00000001922 #31	ENSNSUG00000001925 #30	ENSNSUG00000001936
Mainland tiger snake	MODERN SPECIES	95	ENSNSUG00000014596	ENSNSUG00000014595	ENSNSUG00000014594 #9	ENSNSUG00000014593	ENSNSUG00000014592	ENSNSUG00000014591 #10	ENSNSUG00000014590 #11	ENSNSUG00000014589 #12	ENSNSUG00000014587 #13	ENSNSUG00000014586 #16	ENSNSUG00000014585 #17	ENSNSUG00000014584 #18	ENSNSUG00000014583 #18	ENSNSUG00000014582 #20	ENSNSUG00000014581 #20	ENSNSUG00000014580 #22	ENSNSUG00000014579 #23	ENSNSUG00000014578 #23	ENSNSUG00000014577 #13	ENSNSUG00000014576	ENSNSUG00000014530	ENSNSUG00000014527	ENSNSUG00000014516	ENSNSUG00000014514	ENSNSUG00000014512	ENSNSUG00000014496	ENSNSUG00000014494 #37	ENSNSUG00000014493 #33	ENSNSUG00000014491 #31	ENSNSUG00000014490 #30	KCTD20 (ENSNSUG00000014489) #29
Blue-lipped sea krait	MODERN SPECIES	3817																ENSLLTG00000008268 #22
Indian cobra	MODERN SPECIES	2	INAVA (ENSNNAG00000001871)	KIF21B (ENSNNAG00000001805)	CACNA1S (ENSNNAG00000001249)	RPL10A (ENSNNAG00000001002) #9	ENSNNAG00000000980	MICAL1 (ENSNNAG00000000949)	SMPD2 (ENSNNAG00000000919)	TEAD3 (ENSNNAG00000000891) #10	TULP1 (ENSNNAG00000000865) #11	FKBP5 (ENSNNAG00000000845) #12	ENSNNAG00000000827 #13	CLPS (ENSNNAG00000000818) #16	LHFPL5 (ENSNNAG00000000807) #17	SRPK1 (ENSNNAG00000000790) #18	MAPK14 (ENSNNAG00000000753) #20	MAPK13 (ENSNNAG00000010534) #22	ENSNNAG00000010485 #23	ENSNNAG00000010449 #23	ENSNNAG00000010382 #13	ENSNNAG00000010325	TBC1D22B (ENSNNAG00000010249)	ENSNNAG00000010220	PIM1 (ENSNNAG00000010189)	FGD2 (ENSNNAG00000010112)	MTCH1 (ENSNNAG00000010074)	ENSNNAG00000010033	C6orf89 (ENSNNAG00000010010) #37	ENSNNAG00000009880 #34	CDKN1A (ENSNNAG00000009861) #33	SRSF3 (ENSNNAG00000009830) #31	STK38 (ENSNNAG00000009778) #30
Lizard	MODERN SPECIES	995								TULP1 (ENSACAG00000017155) #11	FKBP5 (ENSACAG00000017117) #12	ENSACAG00000017112 #13	ENSACAG00000045355	CLPS (ENSACAG00000025808) #16	LHFPL5 (ENSACAG00000017100) #17	SRPK1 (ENSACAG00000017021) #18	MAPK14 (ENSACAG00000016966) #20	MAPK13 (ENSACAG00000016916) #22	BRPF3 (ENSACAG00000016890) #23	ENSACAG00000016889 #13	ENSACAG00000036457	ENSACAG00000038379	TBC1D22B (ENSACAG00000016791)	ENSACAG00000040534	PIM1 (ENSACAG00000016764)	FGD2 (ENSACAG00000016704)
tuatara	MODERN SPECIES	943				ENSSPUG00000011123	MLN (ENSSPUG00000011091)	LEMD2 (ENSSPUG00000011077)	IP6K3 (ENSSPUG00000011063)	ENSSPUG00000011057	BAK1 (ENSSPUG00000010867)	UNC5CL (ENSSPUG00000010858)	TSPO2 (ENSSPUG00000010848)	APOBEC2 (ENSSPUG00000010839)	OARD1 (ENSSPUG00000010828)	NFYA (ENSSPUG00000010813)	MAPK14 (ENSSPUG00000010797) #20	MAPK13 (ENSSPUG00000010741) #22	BRPF3 (ENSSPUG00000010698) #23	ENSSPUG00000010679	TBC1D22B (ENSSPUG00000010671)	PIM1 (ENSSPUG00000010649)	FGD2 (ENSSPUG00000010608)	MTCH1 (ENSSPUG00000010582)	ENSSPUG00000010553	C6orf89 (ENSSPUG00000010515) #37	ENSSPUG00000010462	CDKN1A (ENSSPUG00000010441) #33	SRSF3 (ENSSPUG00000010430) #31	STK38 (ENSSPUG00000010406) #30	KCTD20 (ENSSPUG00000010385) #29	ETV7 (ENSSPUG00000010373) #27
Archelosauria	ANCESTRAL SPECIES	22	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.d #9	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00960000189982	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00440000033504.C	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695
Cryptodira	ANCESTRAL SPECIES	27	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00960000189982	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29
Testudinoidea	ANCESTRAL SPECIES	22	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00960000189982	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472.n	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29
Emydidae	ANCESTRAL SPECIES	25	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472.n
painted turtle	MODERN SPECIES	881									CCDC12 (ENSCPBG00000015804)	NBEAL2 (ENSCPBG00000015788)	ENSCPBG00000015783	NARS2 (ENSCPBG00000015777)	ENSCPBG00000015775	TENM4 (ENSCPBG00000008927)	MAPK14 (ENSCPBG00000007963) #20	MAPK13 (ENSCPBG00000007701) #22	ENSCPBG00000007675	BRPF3 (ENSCPBG00000007668) #23
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	292	ZNF76 (ENSTMTG00000014283)	DEF6 (ENSTMTG00000014316)	PPARD (ENSTMTG00000014341) #7	FANCE (ENSTMTG00000014360) #8	MICAL1 (ENSTMTG00000014404)	SMPD2 (ENSTMTG00000014566)	TEAD3 (ENSTMTG00000014589) #10	TULP1 (ENSTMTG00000014610) #11	FKBP5 (ENSTMTG00000014634) #12	ARMC12 (ENSTMTG00000014658) #13	CLPS (ENSTMTG00000014678) #16	LHFPL5 (ENSTMTG00000014693) #17	SRPK1 (ENSTMTG00000014706) #18	MAPK14 (ENSTMTG00000014739) #20	ENSTMTG00000014782 #22	ENSTMTG00000014797 #22	BRPF3 (ENSTMTG00000014807) #23	ENSTMTG00000003330	ENSTMTG00000003347
Three-toed box turtle	MODERN SPECIES	292	ENSTMTG00000014268 #9	ZNF76 (ENSTMTG00000014283)	DEF6 (ENSTMTG00000014316)	PPARD (ENSTMTG00000014341) #7	FANCE (ENSTMTG00000014360) #8	MICAL1 (ENSTMTG00000014404)	SMPD2 (ENSTMTG00000014566)	TEAD3 (ENSTMTG00000014589) #10	TULP1 (ENSTMTG00000014610) #11	FKBP5 (ENSTMTG00000014634) #12	ARMC12 (ENSTMTG00000014658) #13	CLPS (ENSTMTG00000014678) #16	LHFPL5 (ENSTMTG00000014693) #17	SRPK1 (ENSTMTG00000014706) #18	MAPK14 (ENSTMTG00000014739) #20	ENSTMTG00000014782 #22	ENSTMTG00000014797 #22	BRPF3 (ENSTMTG00000014807) #23	ENSTMTG00000003330	ENSTMTG00000003347
Testudinidae	ANCESTRAL SPECIES	26	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00960000189982	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472.n	ENSGT00940000169704	ENSGT00940000153394.c.a.h.m	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29	ENSGT00950000185878
Goode s thornscrub tortoise	MODERN SPECIES	18	ENSGEVG00005001677	FANCE (ENSGEVG00005001655) #8	ENSGEVG00005001625	MICAL1 (ENSGEVG00005001597)	SMPD2 (ENSGEVG00005001556)	TEAD3 (ENSGEVG00005001512) #10	TULP1 (ENSGEVG00005001442) #11	FKBP5 (ENSGEVG00005001393) #12	ENSGEVG00005001377	ARMC12 (ENSGEVG00005001362) #13	CLPS (ENSGEVG00005001342) #16	LHFPL5 (ENSGEVG00005001336) #17	SRPK1 (ENSGEVG00005001288) #18	SLC26A8 (ENSGEVG00005001226) #19	MAPK14 (ENSGEVG00005001172) #20	MAPK13 (ENSGEVG00005001082) #22	BRPF3 (ENSGEVG00005001003) #23	ENSGEVG00005000974	ENSGEVG00005000953	TBC1D22B (ENSGEVG00005000931)	ENSGEVG00005000903	ENSGEVG00005000885	FGD2 (ENSGEVG00005000800)	MTCH1 (ENSGEVG00005000744)	ENSGEVG00005000717	C6orf89 (ENSGEVG00005000656) #37	ENSGEVG00005000621 #34	ENSGEVG00005000594	CDKN1A (ENSGEVG00005000580) #33	SRSF3 (ENSGEVG00005000564) #31	STK38 (ENSGEVG00005000539) #30
Abingdon island giant tortoise	MODERN SPECIES	2299										ENSCABG00000007905	ENSCABG00000007903	LHFPL5 (ENSCABG00000007901) #17	SRPK1 (ENSCABG00000007852) #18	SLC26A8 (ENSCABG00000007846) #19	MAPK14 (ENSCABG00000007369) #20	MAPK13 (ENSCABG00000007357) #22	BRPF3 (ENSCABG00000007112) #23	ENSCABG00000007102	TBC1D22B (ENSCABG00000007101)	ENSCABG00000007100	ENSCABG00000007099	FGD2 (ENSCABG00000007064)	MTCH1 (ENSCABG00000007052)	ENSCABG00000007033	C6orf89 (ENSCABG00000007031) #37	CDKN1A (ENSCABG00000007029) #33	SRSF3 (ENSCABG00000007025) #31	STK38 (ENSCABG00000006649) #30	ENSCABG00000006647	ENSCABG00000006646	ETV7 (ENSCABG00000006645) #27
Chinese turtle	MODERN SPECIES	500	DEF6 (ENSPSIG00000005828)	PPARD (ENSPSIG00000005889) #7	FANCE (ENSPSIG00000005927) #8	ENSPSIG00000005941	MICAL1 (ENSPSIG00000005964)	SMPD2 (ENSPSIG00000006110)	TEAD3 (ENSPSIG00000006176) #10	TULP1 (ENSPSIG00000006186) #11	FKBP5 (ENSPSIG00000006195) #12	ARMC12 (ENSPSIG00000006267) #13	CLPS (ENSPSIG00000006319) #16	LHFPL5 (ENSPSIG00000006348) #17	SRPK1 (ENSPSIG00000006364) #18	SLC26A8 (ENSPSIG00000006559) #19	MAPK14 (ENSPSIG00000006647) #20	MAPK13 (ENSPSIG00000006732) #22	BRPF3 (ENSPSIG00000006906) #23	ENSPSIG00000006910	SHISA4 (ENSPSIG00000006913)	INAVA (ENSPSIG00000006943)	ENSPSIG00000006947	ENSPSIG00000006984	ENSPSIG00000006989	PKP1 (ENSPSIG00000007049)	TNNT2 (ENSPSIG00000007199)	ENSPSIG00000007313	TNNI1 (ENSPSIG00000007323)	CSRP1 (ENSPSIG00000007394)	ENSPSIG00000000048	PPP1R12B (ENSPSIG00000007681)	ENSPSIG00000007166
Archosauria	ANCESTRAL SPECIES	23	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00390000008767.d #9	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695	ENSGT00940000153544.a #30
Aves	ANCESTRAL SPECIES	25	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.h	ENSGT00940000153394.c.a.g.a	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29
Neognathae	ANCESTRAL SPECIES	24	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.h	ENSGT00940000153394.c.a.g.a.a.b	ENSGT00940000153394.c.a.g.a.b	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695	ENSGT00940000153544.a #30
Galloanserae	ANCESTRAL SPECIES	28	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000153832.e.a	ENSGT00940000158289.b	ENSGT00940000159650	ENSGT00940000158955	ENSGT01100000263518.B.b.a	ENSGT00940000159657.d	ENSGT00940000160979	ENSGT00940000164079	ENSGT00940000159939	ENSGT00940000155199	ENSGT00390000016889	ENSGT00950000182825.A.a.a
Anatidae	ANCESTRAL SPECIES	38	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.a ##10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000003856 #13	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472.k	ENSGT00940000153832.e.a	ENSGT00940000158289.b.e	ENSGT00940000159650	ENSGT00940000158955	ENSGT01100000263518.B.b.a	ENSGT00940000159657.d	ENSGT00940000160979	ENSGT00940000164079	ENSGT00940000159939	ENSGT00940000155199	ENSGT00390000016889	ENSGT00950000182825.A.a.a	ENSGT00940000157076
Pink-footed goose	MODERN SPECIES	153										ARMC12 (ENSABRG00000012929) #13	CLPS (ENSABRG00000012942) #16	LHFPL5 (ENSABRG00000012945) #17	SRPK1 (ENSABRG00000012964) #18	SLC26A8 (ENSABRG00000013390) #19	MAPK14 (ENSABRG00000013417) #20	MAPK13 (ENSABRG00000013424) #22	BRPF3 (ENSABRG00000013439) #23	TBC1D22B (ENSABRG00000013450)	ENSABRG00000013466	CACNA1S (ENSABRG00000013746)	KIF21B (ENSABRG00000016228)	ELF3 (ENSABRG00000016260)	GPR37L1 (ENSABRG00000016276)	ARL8A (ENSABRG00000016277)	PTPN7 (ENSABRG00000016282)	ENSABRG00000016289	LGR6 (ENSABRG00000016304)	KLHL12 (ENSABRG00000016321)	RABIF (ENSABRG00000016340)	ENSABRG00000016345	KDM5B (ENSABRG00000016464)
Duck	MODERN SPECIES	18	ENSAPLG00000008250	ENSAPLG00000016899	BTG2 (ENSAPLG00000002151)	FMOD (ENSAPLG00000007593)	PRELP (ENSAPLG00000014551)	OPTC (ENSAPLG00000014416)	ATP2B4 (ENSAPLG00000012830)	TULP1 (ENSAPLG00000030544) #11	FKBP5 (ENSAPLG00000003627) #12	ARMC12 (ENSAPLG00000024833) #13	CLPS (ENSAPLG00000003624) #16	LHFPL5 (ENSAPLG00000028023) #17	SRPK1 (ENSAPLG00000003371) #18	SLC26A8 (ENSAPLG00000002988) #19	MAPK14 (ENSAPLG00000002603) #20	MAPK13 (ENSAPLG00000002168) #22	ENSAPLG00000015505	BRPF3 (ENSAPLG00000000598) #23	ENSAPLG00000018472	CACNA1S (ENSAPLG00000002552)	ENSAPLG00000024836	KIF21B (ENSAPLG00000004318)	ELF3 (ENSAPLG00000026589)	ENSAPLG00000004698	ELK4 (ENSAPLG00000004738)	MFSD4A (ENSAPLG00000004747)	CDK18 (ENSAPLG00000004817)	NUAK2 (ENSAPLG00000020575)	DSTYK (ENSAPLG00000005300)	RBBP5 (ENSAPLG00000005563)	TMEM81 (ENSAPLG00000000640)
Phasianidae	ANCESTRAL SPECIES	22						ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.v #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000158289.b	ENSGT00940000159650	ENSGT00940000158955	ENSGT01100000263518.B.b.a	ENSGT00940000159657.d	ENSGT00940000160979	ENSGT00940000164079	ENSGT00940000159939	ENSGT00920000149095.a	ENSGT00630000089917	ENSGT00940000158255	ENSGT00940000155199
Phasianidae_b	ANCESTRAL SPECIES	22						ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264.v #18	ENSGT01100000263544.c.a.b.a #19	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000158289.b	ENSGT00940000159650	ENSGT00940000158955	ENSGT01100000263518.B.b.a	ENSGT00940000159657.d	ENSGT00940000160979	ENSGT00940000164079	ENSGT00940000159939	ENSGT00920000149095.a	ENSGT00630000089917	ENSGT00940000158255	ENSGT00940000155199
Turkey	MODERN SPECIES	20	ENSMGAG00000022615	ENSMGAG00000001270	ENSMGAG00000001297	ENSMGAG00000001214	ENSMGAG00000001115	ENSMGAG00000001091	ENSMGAG00000001081	ENSMGAG00000021572	ENSMGAG00000022162	ENSMGAG00000000968	ENSMGAG00000000895	ENSMGAG00000000891	BRPF3 (ENSMGAG00000000829) #23	ENSMGAG00000000875	ENSMGAG00000000790 #20	ENSMGAG00000000797 #22	ENSMGAG00000019683 #20	SLC26A8 (ENSMGAG00000000733) #19	ENSMGAG00000000715 #18	ENSMGAG00000000709 #17	ENSMGAG00000019486 #18	CLPS (ENSMGAG00000000703) #16	ENSMGAG00000000691 #12	ENSMGAG00000000682 #11	ENSMGAG00000000674 #10	ENSMGAG00000006851	ENSMGAG00000006821	ENSMGAG00000006890	ENSMGAG00000017347	ENSMGAG00000016722	HIPK1 (ENSMGAG00000005437)
Chicken	MODERN SPECIES	18					ENSGALG00010026836	MICAL1 (ENSGALG00010026846)	SMPD2 (ENSGALG00010026854)	TEAD3 (ENSGALG00010026874) #10	TULP1 (ENSGALG00010026885) #11	FKBP5 (ENSGALG00010026893) #12	CLPS (ENSGALG00010026906) #16	LHFPL5 (ENSGALG00010026950) #17	SRPK1 (ENSGALG00010026964) #18	SLC26A8 (ENSGALG00010027001) #19	MAPK14 (ENSGALG00010027041) #20	MAPK13 (ENSGALG00010027045) #22	BRPF3 (ENSGALG00010027074) #23	TBC1D22B (ENSGALG00010027080)	PIM1 (ENSGALG00010027085)	CACNA1S (ENSGALG00010027086)	KIF21B (ENSGALG00010027107)	ELF3 (ENSGALG00010027121)	GPR37L1 (ENSGALG00010024486)	ARL8A (ENSGALG00010024501)	PTPN7 (ENSGALG00010025801)	ENSGALG00010025829	LGR6 (ENSGALG00010025865)	ZC3H11A (ENSGALG00010025892)	NELFE (ENSGALG00010025929)	SKIC2 (ENSGALG00010025933)	KLHL12 (ENSGALG00010025970)
Japanese quail	MODERN SPECIES	18	ENSCJPG00005002210	ENSCJPG00005002213	ENSCJPG00005002222	ENSCJPG00005002225	ENSCJPG00005002229	ENSCJPG00005002257	SMPD2 (ENSCJPG00005002265)	TEAD3 (ENSCJPG00005002268) #10	TULP1 (ENSCJPG00005002270) #11	FKBP5 (ENSCJPG00005002277) #12	ENSCJPG00005002278	LHFPL5 (ENSCJPG00005002279) #17	SRPK1 (ENSCJPG00005002302) #18	SLC26A8 (ENSCJPG00005003950) #19	MAPK14 (ENSCJPG00005003954) #20	MAPK13 (ENSCJPG00005003981) #22	BRPF3 (ENSCJPG00005003986) #23	TBC1D22B (ENSCJPG00005004025)	PIM1 (ENSCJPG00005004029)	CACNA1S (ENSCJPG00005004046)	KIF21B (ENSCJPG00005006012)	ELF3 (ENSCJPG00005006825)	GPR37L1 (ENSCJPG00005006828)	ARL8A (ENSCJPG00005006829)	PTPN7 (ENSCJPG00005006834)	ENSCJPG00005006835	LGR6 (ENSCJPG00005006846)	ENSCJPG00005006848	SKIC2 (ENSCJPG00005006849)	KLHL12 (ENSCJPG00005006915)	RABIF (ENSCJPG00005006917)
Neognathae_b	ANCESTRAL SPECIES	24	ENSGT00390000008767.d #9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000153394.c.a.g.a.a.b	ENSGT00940000153394.c.a.g.a.b	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695	ENSGT00940000153544.a #30
Neognathae_c	ANCESTRAL SPECIES	27	ENSGT00940000153185.a.a.b	ENSGT00390000008767.d #9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270 #37	ENSGT00940000160379 #34	ENSGT00940000159918.a.b #33	ENSGT00910000144115.a #31	ENSGT00970000193695	ENSGT00940000153544.a #30	ENSGT00390000007975.b #29	ENSGT00940000162211 #27
Golden eagle	MODERN SPECIES	16	RPL10A (ENSACCG00020014808) #9	ZNF76 (ENSACCG00020014824)	DEF6 (ENSACCG00020014845)	PPARD (ENSACCG00020014867) #7	FANCE (ENSACCG00020014883) #8	ENSACCG00020014912	MICAL1 (ENSACCG00020014962)	SMPD2 (ENSACCG00020015019)	TEAD3 (ENSACCG00020015042) #10	TULP1 (ENSACCG00020015069) #11	FKBP5 (ENSACCG00020015103) #12	CLPS (ENSACCG00020015120) #16	LHFPL5 (ENSACCG00020015137) #17	SRPK1 (ENSACCG00020015171) #18	MAPK14 (ENSACCG00020015214) #20	MAPK13 (ENSACCG00020015260) #22	BRPF3 (ENSACCG00020015289) #23	ENSACCG00020015307	TBC1D22B (ENSACCG00020015326)	PIM1 (ENSACCG00020015351)	FGD2 (ENSACCG00020015370)	MTCH1 (ENSACCG00020015394)	ENSACCG00020015423	C6orf89 (ENSACCG00020015438) #37	ENSACCG00020015459 #34	ENSACCG00020015472 #33	SRSF3 (ENSACCG00020015489) #31	STK38 (ENSACCG00020015503) #30	KCTD20 (ENSACCG00020015539) #29	ETV7 (ENSACCG00020015560) #27	ENSACCG00020015605 #24
Kakapo	MODERN SPECIES	30	RPL10A (ENSSHBG00005008583) #9	ZNF76 (ENSSHBG00005008577)	DEF6 (ENSSHBG00005008569)	PPARD (ENSSHBG00005008565) #7	FANCE (ENSSHBG00005008552) #8	ENSSHBG00005008540	MICAL1 (ENSSHBG00005008519)	SMPD2 (ENSSHBG00005008509)	TEAD3 (ENSSHBG00005008445) #10	TULP1 (ENSSHBG00005008416) #11	FKBP5 (ENSSHBG00005008405) #12	CLPS (ENSSHBG00005008395) #16	LHFPL5 (ENSSHBG00005008391) #17	SRPK1 (ENSSHBG00005008383) #18	MAPK14 (ENSSHBG00005008376) #20	MAPK13 (ENSSHBG00005008359) #22	BRPF3 (ENSSHBG00005008346) #23	TBC1D22B (ENSSHBG00005008331)	ENSSHBG00005008319	KIF21B (ENSSHBG00005008301)	CACNA1S (ENSSHBG00005006434)	OLFML3 (ENSSHBG00005006051)	HIPK1 (ENSSHBG00005005909)	DCLRE1B (ENSSHBG00005005849)	AP4B1 (ENSSHBG00005001005)	ENSSHBG00005001004	RSBN1 (ENSSHBG00005001001)	PHTF1 (ENSSHBG00005014943)	MAGI3 (ENSSHBG00005014772)	LRIG2 (ENSSHBG00005014732)	SLC16A1 (ENSSHBG00005014725)
Passeriformes	ANCESTRAL SPECIES	21	ENSGT00390000008767.d #9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000160958	ENSGT00940000157025	ENSGT00940000158175	ENSGT00940000155356	ENSGT00940000158083	ENSGT00940000157665	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a
Passeriformes_d	ANCESTRAL SPECIES	21	ENSGT00390000008767.d #9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000160958	ENSGT00940000157025	ENSGT00940000158175	ENSGT00940000155356	ENSGT00940000158083	ENSGT00940000157665	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a
Passeriformes_g	ANCESTRAL SPECIES	24	ENSGT00390000008767.d #9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000160958	ENSGT00940000157025	ENSGT00940000158175	ENSGT00940000155356	ENSGT00940000164219.a.a.b.c.a	ENSGT00940000164219.a.a.b.c.b	ENSGT00940000164219.a.b.b	ENSGT00940000160375.A	ENSGT00940000161110.a.b.a.b	ENSGT00940000154640
Medium ground finch	MODERN SPECIES	246								MICAL1 (ENSGFOG00000009493)	SMPD2 (ENSGFOG00000009506)	TEAD3 (ENSGFOG00000009523) #10	TULP1 (ENSGFOG00000009587) #11	FKBP5 (ENSGFOG00000009596) #12	CLPS (ENSGFOG00000009607) #16	SRPK1 (ENSGFOG00000009612) #18	MAPK14 (ENSGFOG00000009629) #20	MAPK13 (ENSGFOG00000009656) #22	BRPF3 (ENSGFOG00000009664) #23	TBC1D22B (ENSGFOG00000009671)	PHTF1 (ENSGFOG00000009679)	RSBN1 (ENSGFOG00000009704)	PTPN22 (ENSGFOG00000009805)	AP4B1 (ENSGFOG00000009893)	DCLRE1B (ENSGFOG00000009902)	HIPK1 (ENSGFOG00000009908)	ENSGFOG00000009922	ENSGFOG00000009944	ENSGFOG00000009951	ENSGFOG00000009962	ENSGFOG00000009980	ENSGFOG00000009984	CAMK1G (ENSGFOG00000009989)
Passeroidea	ANCESTRAL SPECIES	24	ENSGT00390000008767.d #9	ENSGT00940000160911	ENSGT00950000183017.b.b.a.b	ENSGT00940000156676 #7	ENSGT00950000183077.b	ENSGT00390000000705 #8	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #10	ENSGT00940000158771 #11	ENSGT00940000158726 #12	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000157472	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000160958	ENSGT00940000157025	ENSGT00940000158175	ENSGT00940000155356	ENSGT00940000164219.a.a.b.c.a	ENSGT00940000164219.a.a.b.c.b	ENSGT00940000161110.a.b.a.b	ENSGT00940000164219.a.b.b	ENSGT00940000163310	ENSGT00940000154640
Common canary	MODERN SPECIES	62	ZNF76 (ENSSCAG00000015828)	DEF6 (ENSSCAG00000015827)	PPARD (ENSSCAG00000015824) #7	ENSSCAG00000015820	ENSSCAG00000015815 #8	ENSSCAG00000015810	MICAL1 (ENSSCAG00000015777)	SMPD2 (ENSSCAG00000015767)	TEAD3 (ENSSCAG00000015763) #10	TULP1 (ENSSCAG00000015756) #11	FKBP5 (ENSSCAG00000015748) #12	CLPS (ENSSCAG00000015746) #16	LHFPL5 (ENSSCAG00000015744) #17	SRPK1 (ENSSCAG00000015738) #18	MAPK14 (ENSSCAG00000015730) #20	MAPK13 (ENSSCAG00000015726) #22	BRPF3 (ENSSCAG00000015721) #23	TBC1D22B (ENSSCAG00000015715)	PHTF1 (ENSSCAG00000015710)	RSBN1 (ENSSCAG00000015697)	ENSSCAG00000015687	ENSSCAG00000015685	AP4B1 (ENSSCAG00000015682)	DCLRE1B (ENSSCAG00000015679)	HIPK1 (ENSSCAG00000015672)	ENSSCAG00000015667	ENSSCAG00000015657	ENSSCAG00000015652	ENSSCAG00000015646	ENSSCAG00000015643	ENSSCAG00000015641
Zebra finch	MODERN SPECIES	19	ZNF76 (ENSTGUG00000001745)	DEF6 (ENSTGUG00000001738)	PPARD (ENSTGUG00000001735) #7	ENSTGUG00000001733	FANCE (ENSTGUG00000001732) #8	ENSTGUG00000027374	MICAL1 (ENSTGUG00000001721)	SMPD2 (ENSTGUG00000001713)	TEAD3 (ENSTGUG00000001691) #10	TULP1 (ENSTGUG00000001686) #11	FKBP5 (ENSTGUG00000001670) #12	CLPS (ENSTGUG00000021840) #16	LHFPL5 (ENSTGUG00000001662) #17	SRPK1 (ENSTGUG00000001648) #18	MAPK14 (ENSTGUG00000001633) #20	MAPK13 (ENSTGUG00000001624) #22	BRPF3 (ENSTGUG00000001612) #23	TBC1D22B (ENSTGUG00000001592)	PHTF1 (ENSTGUG00000001583)	RSBN1 (ENSTGUG00000001581)	ENSTGUG00000022513	ENSTGUG00000029592	AP4B1 (ENSTGUG00000001565)	DCLRE1B (ENSTGUG00000020225)	HIPK1 (ENSTGUG00000001553)	ENSTGUG00000024540	ENSTGUG00000001552	ENSTGUG00000027497	ENSTGUG00000001539	ENSTGUG00000027790	CD34 (ENSTGUG00000028602)
Flycatcher	MODERN SPECIES	18	ENSFALG00000003701 #9	ZNF76 (ENSFALG00000003698)	DEF6 (ENSFALG00000003694)	PPARD (ENSFALG00000003689) #7	ENSFALG00000024512	ENSFALG00000003677 #8	ENSFALG00000003653	ENSFALG00000003639	TEAD3 (ENSFALG00000003635) #10	TULP1 (ENSFALG00000003621) #11	FKBP5 (ENSFALG00000003600) #12	CLPS (ENSFALG00000003594) #16	ENSFALG00000003587 ##17	SRPK1 (ENSFALG00000003585) #18	MAPK14 (ENSFALG00000003563) #20	MAPK13 (ENSFALG00000003537) #22	BRPF3 (ENSFALG00000003524) #23	ENSFALG00000003517	PHTF1 (ENSFALG00000003510)	RSBN1 (ENSFALG00000003503)	AP4B1 (ENSFALG00000003489)	HIPK1 (ENSFALG00000003475)	OLFML3 (ENSFALG00000028315)	SYT6 (ENSFALG00000003461)	TRIM33 (ENSFALG00000003445)	BCAS2 (ENSFALG00000003431)	DENND2C (ENSFALG00000003425)	AMPD1 (ENSFALG00000003420)	NRAS (ENSFALG00000003415)	CSDE1 (ENSFALG00000003407)	SIKE1 (ENSFALG00000023219)
Great tit	MODERN SPECIES	19	ENSPMJG00000012388	DEF6 (ENSPMJG00000012387)	PPARD (ENSPMJG00000012386) #7	ENSPMJG00000012385	FANCE (ENSPMJG00000012384) #8	ENSPMJG00000012383	MICAL1 (ENSPMJG00000012382)	SMPD2 (ENSPMJG00000012381)	TEAD3 (ENSPMJG00000012380) #10	TULP1 (ENSPMJG00000012378) #11	FKBP5 (ENSPMJG00000012377) #12	CLPS (ENSPMJG00000012375) #16	LHFPL5 (ENSPMJG00000012374) #17	SRPK1 (ENSPMJG00000012373) #18	MAPK14 (ENSPMJG00000012371) #20	MAPK13 (ENSPMJG00000012370) #22	BRPF3 (ENSPMJG00000012369) #23	TBC1D22B (ENSPMJG00000012368)	PHTF1 (ENSPMJG00000011996)	RSBN1 (ENSPMJG00000011995)	PTPN22 (ENSPMJG00000011994)	AP4B1 (ENSPMJG00000011993)	DCLRE1B (ENSPMJG00000011992)	HIPK1 (ENSPMJG00000011991)	OLFML3 (ENSPMJG00000011990)	SYT6 (ENSPMJG00000011989)	TRIM33 (ENSPMJG00000011988)	BCAS2 (ENSPMJG00000011987)	DENND2C (ENSPMJG00000011986)	AMPD1 (ENSPMJG00000011985)	ENSPMJG00000011984
Australian saltwater crocodile	MODERN SPECIES	52					ENSCPRG00005002990	SMPD2 (ENSCPRG00005003001)	TEAD3 (ENSCPRG00005003008) #10	TULP1 (ENSCPRG00005003022) #11	FKBP5 (ENSCPRG00005003028) #12	ENSCPRG00005003032	CLPS (ENSCPRG00005003035) #16	LHFPL5 (ENSCPRG00005003052) #17	SRPK1 (ENSCPRG00005003059) #18	SLC26A8 (ENSCPRG00005003078) #19	MAPK14 (ENSCPRG00005003095) #20	MAPK13 (ENSCPRG00005003184) #22	BRPF3 (ENSCPRG00005003190) #23	ENSCPRG00005003206	TBC1D22B (ENSCPRG00005003209)	ENSCPRG00005003218	PIM1 (ENSCPRG00005003224)	FGD2 (ENSCPRG00005003284)	MTCH1 (ENSCPRG00005003292)	ENSCPRG00005003302	C6orf89 (ENSCPRG00005003304) #37	ENSCPRG00005003307 #34	CDKN1A (ENSCPRG00005003310) #33	SRSF3 (ENSCPRG00005003315) #31	STK38 (ENSCPRG00005003323) #30	KCTD20 (ENSCPRG00005003333) #29	ETV7 (ENSCPRG00005003334) #27
Anura	ANCESTRAL SPECIES																	ENSGT00940000159584 #22
Frog	MODERN SPECIES	2	cacna1s (ENSXETG00000015130)	rps10 (ENSXETG00000015129)	fance (ENSXETG00000039261) #8	mkrn3 (ENSXETG00000015127)	ppard (ENSXETG00000015121) #7	ENSXETG00000048797	def6 (ENSXETG00000048907)	ENSXETG00000047433	anks1a (ENSXETG00000015109)	ENSXETG00000043995	cept1 (ENSXETG00000004387)	dennd2d (ENSXETG00000004388)	ENSXETG00000042035	nfasc (ENSXETG00000004390)	cntn2 (ENSXETG00000015325)	mapk13 (ENSXETG00000031922) #22	ENSXETG00000042577	ENSXETG00000041926	brpf3 (ENSXETG00000033963) #23	tbc1d22b (ENSXETG00000015365)	ENSXETG00000044629	mybph (ENSXETG00000015370)	ENSXETG00000044677	BAK1 (ENSXETG00000038338)	ENSXETG00000049301	ENSXETG00000042168	ENSXETG00000044102	itpr3 (ENSXETG00000018719)	ENSXETG00000044608	ENSXETG00000043082	grm4 (ENSXETG00000006732)
Coelacanth	MODERN SPECIES	480																MAPK13 (ENSLACG00000000703) #22	BRPF3 (ENSLACG00000002077) #23	TBC1D22B (ENSLACG00000007409)	PIM1 (ENSLACG00000008114)	ENSLACG00000009626	MTCH1 (ENSLACG00000010021)	ENSLACG00000010562	TNNI1 (ENSLACG00000010851)	ENSLACG00000010982	tnnt2d (ENSLACG00000011163)	ENSLACG00000011620	ENSLACG00000012055	LHFPL5 (ENSLACG00000012471) #17	SRPK1 (ENSLACG00000012628) #18	CSRP1 (ENSLACG00000012973)	ENSLACG00000013429
Actinopterygii	ANCESTRAL SPECIES	134	ENSGT00730000112095	ENSGT01030000234588.b.a	ENSGT00440000039564.a.a	ENSGT00940000156777	ENSGT00940000156637	ENSGT00940000158040	ENSGT00390000009166	ENSGT00950000182956.b.b.b.e.a #10	ENSGT00940000158771 #11	ENSGT00940000156194 #35	ENSGT00940000159650	ENSGT00390000012644 #16	ENSGT00990000203541.a.a.b #17	ENSGT00940000155264 #18	ENSGT00940000155325 #20	ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a
Neopterygii	ANCESTRAL SPECIES	256																ENSGT00940000159584 #22	ENSGT00940000155056 #23	ENSGT00940000155356	ENSGT00940000158083	ENSGT00940000157665	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000163318
Osteoglossocephalai	ANCESTRAL SPECIES	765																ENSGT00940000159584 #22	ENSGT00940000155056 #23
Osteoglossiformes	ANCESTRAL SPECIES	167	ENSGT00390000010165.c	ENSGT00390000016392	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00940000158947	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00390000014494	ENSGT00940000156361.B	ENSGT00390000003344	ENSGT00940000166498	ENSGT00940000159584 #22	ENSGT00940000155056 #23
P. kingsleyae	MODERN SPECIES	263	otud3 (ENSPKIG00000009590)	vwa1 (ENSPKIG00000009575)	TMCO4 (ENSPKIG00000009539)	ENSPKIG00000009517	ENSPKIG00000009507	SIKE1 (ENSPKIG00000009488)	csde1 (ENSPKIG00000009459)	ENSPKIG00000009443	nras (ENSPKIG00000009416)	ampd1 (ENSPKIG00000009358)	DENND2C (ENSPKIG00000009318)	bcas2 (ENSPKIG00000009296)	trim33 (ENSPKIG00000009222)	slc66a1 (ENSPKIG00000009165)	nr1h5 (ENSPKIG00000009094)	ENSPKIG00000009004 #22	BRPF3 (ENSPKIG00000008910) #23	zgc:153867 (ENSPKIG00000008811)	C1QL4 (ENSPKIG00000008767)	asb8 (ENSPKIG00000008744)	ENSPKIG00000008729	ENSPKIG00000008717
Asian bonytongue	MODERN SPECIES	17	HTR6 (ENSSFOG00015007355)	ENSSFOG00015012405	ENSSFOG00015007378	capzb (ENSSFOG00015007401)	taf13 (ENSSFOG00015007460)	SIKE1 (ENSSFOG00015024912)	csde1 (ENSSFOG00015007498)	ENSSFOG00015007564	nras (ENSSFOG00015032247)	ampd1 (ENSSFOG00015007635)	DENND2C (ENSSFOG00015007663)	bcas2 (ENSSFOG00015028109)	trim33 (ENSSFOG00015007725)	slc66a1 (ENSSFOG00015007821)	nr1h5 (ENSSFOG00015007836)	MAPK13 (ENSSFOG00015007849) #22	BRPF3 (ENSSFOG00015007897) #23	KDM5B (ENSSFOG00015007981)	tuba5 (ENSSFOG00015008228)	KLHL12 (ENSSFOG00015008243)	adipor1b (ENSSFOG00015008277)	LMOD1 (ENSSFOG00015030917)	ENSSFOG00015030303	INKA2 (ENSSFOG00015008343)	ddx20 (ENSSFOG00015008354)	kcnd3 (ENSSFOG00015008373)	CTTNBP2NL (ENSSFOG00015030821)	ENSSFOG00015031536	ENSSFOG00015008443	st7l (ENSSFOG00015008506)	mov10b.1 (ENSSFOG00015008568)
Clupeocephala	ANCESTRAL SPECIES	57															ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00390000018003.a	ENSGT00940000168345	ENSGT01010000222287.A	ENSGT00390000001400	ENSGT00940000160734.d
Otomorpha	ANCESTRAL SPECIES	83	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000156776.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00390000006665.b.h	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00950000183145.A.b.b	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00940000157472	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00390000016950	ENSGT00950000182839.B.a.b
Clupeiformes	ANCESTRAL SPECIES	80	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000156776.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00390000006665.b.h	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00950000183145.A.b.b	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00940000157472	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT00980000199713
Atlantic herring	MODERN SPECIES	20	LHFPL4 (ENSCHAG00000008817) ##17	CPNE9 (ENSCHAG00000008851)	ENSCHAG00000009780	ENSCHAG00000009804	slc6a8 (ENSCHAG00000009838)	ENSCHAG00000010690	plxna3 (ENSCHAG00000010924)	ptpn18 (ENSCHAG00000016444)	ENSCHAG00000016460	gripap1 (ENSCHAG00000016485)	kcnd1 (ENSCHAG00000016901)	ENSCHAG00000016925	pim1 (ENSCHAG00000016969)	TBC1D22B (ENSCHAG00000017033)	ENSCHAG00000017578	MAPK13 (ENSCHAG00000017614) #22	BRPF3 (ENSCHAG00000018370) #23	nr1h5 (ENSCHAG00000018560)	slc66a1 (ENSCHAG00000018565)	trim33 (ENSCHAG00000018593)	bcas2 (ENSCHAG00000019048)	DENND2C (ENSCHAG00000019082)	ampd1 (ENSCHAG00000019158)	nras (ENSCHAG00000020193)	csde1 (ENSCHAG00000020279)	ENSCHAG00000022130	ENSCHAG00000022134	ENSCHAG00000022232	ENSCHAG00000022245	EMILIN3 (ENSCHAG00000022249)	b4galt5 (ENSCHAG00000022268)
Denticle herring	MODERN SPECIES	1	pim2 (ENSDCDG00000030420)	slc35a2 (ENSDCDG00000030422)	bcap31 (ENSDCDG00000030429)	slc6a8 (ENSDCDG00000030465)	ENSDCDG00000032001	plxna3 (ENSDCDG00000032471)	ptpn18 (ENSDCDG00000033724)	gripap1 (ENSDCDG00000033747)	kcnd1 (ENSDCDG00000033776)	ENSDCDG00000033778	ENSDCDG00000033784	pim1 (ENSDCDG00000033790)	TBC1D22B (ENSDCDG00000033801)	ENSDCDG00000033813	ENSDCDG00000033816	MAPK13 (ENSDCDG00000033839) #22	BRPF3 (ENSDCDG00000034092) #23	nr1h5 (ENSDCDG00000034128)	slc66a1 (ENSDCDG00000034129)	trim33 (ENSDCDG00000034137)	bcas2 (ENSDCDG00000034162)	DENND2C (ENSDCDG00000034183)	ampd1 (ENSDCDG00000034239)	nras (ENSDCDG00000034521)	ENSDCDG00000034522	csde1 (ENSDCDG00000034580)	ENSDCDG00000034950	mapre1a (ENSDCDG00000034952)	dnmt3ba (ENSDCDG00000035027)	ENSDCDG00000035256	ENSDCDG00000035268
Otophysi	ANCESTRAL SPECIES	127	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000156776.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00390000006665.b.h	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00950000183145.A.b.b	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00940000157472	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00940000160326.d	ENSGT00940000158064	ENSGT00530000063735.b
Characiphysae	ANCESTRAL SPECIES	41	ENSGT00940000163427.c	ENSGT00950000182827.B	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000156776.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00390000006665.b.h	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00950000183145.A.b.b	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00940000157472	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00940000160326.d	ENSGT00940000158064	ENSGT00530000063735.b	ENSGT00940000170611	ENSGT00940000159976	ENSGT00740000116956	ENSGT00940000155976.b.a.a
Characiphysae_b	ANCESTRAL SPECIES	100							ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00390000006665.b.h	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00940000157472	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00940000160326.d	ENSGT00940000158064	ENSGT00530000063735.b	ENSGT00940000159976	ENSGT00740000116956	ENSGT00940000155976.b.a.a	ENSGT00940000161076
Characoidei	ANCESTRAL SPECIES	99							ENSGT01050000244850.A.a.o.a.a	ENSGT00940000164289.a	ENSGT00390000006665.b.h	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00940000157472	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00940000165059.B.a	ENSGT00940000160326.d	ENSGT00940000158064	ENSGT00530000063735.b	ENSGT00940000159976	ENSGT00740000116956	ENSGT00940000155976.b.a.a
Red-bellied piranha	MODERN SPECIES	275												ENSPNAG00000015220	pim1 (ENSPNAG00000015243)	TBC1D22B (ENSPNAG00000015255)	ENSPNAG00000015272	ENSPNAG00000015338 #22	BRPF3 (ENSPNAG00000015397) #23	nr1h5 (ENSPNAG00000015478)	slc66a1 (ENSPNAG00000015540)	trim33 (ENSPNAG00000015676)	bcas2 (ENSPNAG00000015736)	DENND2C (ENSPNAG00000015752)	ampd1 (ENSPNAG00000015780)	nras (ENSPNAG00000015801)	ENSPNAG00000015815
Mexicana tetra	MODERN SPECIES	21	rmi1 (ENSAMXG00000037773)	NTRK2 (ENSAMXG00000011319)	agtpbp1 (ENSAMXG00000011291)	naa35 (ENSAMXG00000011259)	sorbs3 (ENSAMXG00000043577)	pdlim2 (ENSAMXG00000032208)	ENSAMXG00000032686	ptpn18 (ENSAMXG00000038427)	MON1B (ENSAMXG00000017621)	gripap1 (ENSAMXG00000017631)	kcnd1 (ENSAMXG00000031121)	ENSAMXG00000033942	pim1 (ENSAMXG00000036419)	TBC1D22B (ENSAMXG00000030380)	ENSAMXG00000038067	ENSAMXG00000032708 #22	BRPF3 (ENSAMXG00000012209) #23	nr1h5 (ENSAMXG00000012228)	slc66a1 (ENSAMXG00000036105)	trim33 (ENSAMXG00000012262)	bcas2 (ENSAMXG00000012276)	DENND2C (ENSAMXG00000012309)	ampd1 (ENSAMXG00000012319)	nras (ENSAMXG00000012327)	ENSAMXG00000038887	plekha2 (ENSAMXG00000012353)	ENSAMXG00000012375	SLC2A6 (ENSAMXG00000012392)	ENSAMXG00000031635	FIBCD1 (ENSAMXG00000012417)	traf1 (ENSAMXG00000012427)
Electric eel	MODERN SPECIES	145													pim1 (ENSEEEG00000022420)	TBC1D22B (ENSEEEG00000022408)	ENSEEEG00000022405	MAPK13 (ENSEEEG00000022296) #22	BRPF3 (ENSEEEG00000022283) #23	nr1h5 (ENSEEEG00000022276)	slc66a1 (ENSEEEG00000022275)	trim33 (ENSEEEG00000021867)	bcas2 (ENSEEEG00000021803)	DENND2C (ENSEEEG00000021799)	ampd1 (ENSEEEG00000021132)	nras (ENSEEEG00000021105)	ASB13 (ENSEEEG00000021104)	plekha2 (ENSEEEG00000021087)	ENSEEEG00000021082	SLC2A6 (ENSEEEG00000021077)	FIBCD1 (ENSEEEG00000021075)	traf1 (ENSEEEG00000021072)	phf19 (ENSEEEG00000021032)
Channel catfish	MODERN SPECIES	24	otud5 (ENSIPUG00000011788)	pim2 (ENSIPUG00000011752)	slc35a2 (ENSIPUG00000011733)	bcap31 (ENSIPUG00000011713)	Slc6a8 (ENSIPUG00000011661)	ENSIPUG00000011620	plxna3 (ENSIPUG00000011528)	Ptpn18 (ENSIPUG00000011444)	Gripap1 (ENSIPUG00000011217)	kcnd1 (ENSIPUG00000011155)	ENSIPUG00000011105	ENSIPUG00000011089	PIM3 (ENSIPUG00000011062)	tbc1d22b (ENSIPUG00000011021)	ENSIPUG00000011014	ENSIPUG00000010985 #22	BRPF3 (ENSIPUG00000010904) #23	Nr1h4 (ENSIPUG00000010855)	slc66a1 (ENSIPUG00000010811)	trim33 (ENSIPUG00000010731)	bcas2 (ENSIPUG00000010649)	dennd2c (ENSIPUG00000010599)	ampd1 (ENSIPUG00000010509)	nras (ENSIPUG00000010414)	ASB13 (ENSIPUG00000010393)	plekha2 (ENSIPUG00000010372)	ENSIPUG00000010341	stkld1 (ENSIPUG00000010316)	SLC2A6 (ENSIPUG00000010267)	ENSIPUG00000010227	FIBCD1 (ENSIPUG00000010156)
Cyprinoidei	ANCESTRAL SPECIES	32	ENSGT00940000175166	ENSGT00950000182827.B	ENSGT00390000011863.c	ENSGT00940000155869	ENSGT00940000156776.c	ENSGT01050000244850.A.a.o.a	ENSGT00940000164289.a	ENSGT00390000006665.b.h	ENSGT00720000108868	ENSGT00940000155472.a.a	ENSGT00950000183145.A.b.b	ENSGT00940000166296	ENSGT00940000153394.c.a	ENSGT00940000157472	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00940000158947	ENSGT00940000160326.d	ENSGT00940000158064	ENSGT00530000063735.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	134	ENSGT00940000175166	ENSGT00950000182827.B.c	ENSGT00390000011863.c.o.a	ENSGT00940000155869.c	ENSGT00940000156776.c	ENSGT01050000244850.A.a.o.a.c	ENSGT00940000164289.a.a	ENSGT00390000006665.b.h	ENSGT00720000108868.c	ENSGT00940000155472.a.a.a	ENSGT00940000166296.a	ENSGT00940000153394.c.a.b	ENSGT00940000157472.b	ENSGT00940000160682.a.b	ENSGT00940000160682.a.a.a	ENSGT00940000159584.g #22	ENSGT00940000155056.a.a #23	ENSGT00940000166498.e	ENSGT00390000003344.a	ENSGT00940000156361.B.b	ENSGT00390000014494.bc	ENSGT00950000182931.B.a.b.c	ENSGT00950000183011.c.a.a.h	ENSGT00940000158947.b	ENSGT00940000160326.d	ENSGT00940000158064.j	ENSGT00530000063735.b.d	ENSGT00940000157654.c
Cyprininae_a	ANCESTRAL SPECIES	258	ENSGT00940000175166	ENSGT00950000182827.B.c	ENSGT00390000011863.c.o.a	ENSGT00940000155869.c	ENSGT00940000156776.c	ENSGT01050000244850.A.a.o.a.c	ENSGT00940000164289.a.a	ENSGT00390000006665.b.h	ENSGT00720000108868.c	ENSGT00940000155472.a.a.a	ENSGT00940000166296.a	ENSGT00940000153394.c.a.b	ENSGT00940000157472.b	ENSGT00940000160682.a.b	ENSGT00940000160682.a.a.a	ENSGT00940000159584.g #22	ENSGT00940000155056.a.a #23	ENSGT00940000166498.e	ENSGT00390000003344.a	ENSGT00940000156361.B.b	ENSGT00390000014494.bc	ENSGT00950000182931.B.a.b.c	ENSGT00950000183011.c.a.a.h	ENSGT00940000158947.b	ENSGT00940000165059.B.a	ENSGT00940000158064.j	ENSGT00530000063735.b.d	ENSGT00940000157654.c	ENSGT00940000156639.c.a	ENSGT00390000005811.ab	ENSGT00940000158634.a.a
Common carp reference	MODERN SPECIES	23	ENSCCRG00000071095	slc35a2 (ENSCCRG00000035398)	bcap31 (ENSCCRG00000035634)	slc6a8 (ENSCCRG00000035629)	ENSCCRG00000051042	plxna3 (ENSCCRG00000051129)	ptpn18 (ENSCCRG00000059436)	ENSCCRG00000079483	gripap1 (ENSCCRG00000054385)	kcnd1 (ENSCCRG00000082259)	ENSCCRG00000077067	pim1 (ENSCCRG00000065822)	ENSCCRG00000061039	ENSCCRG00000014422	ENSCCRG00000033784	ENSCCRG00000033781 #22	ENSCCRG00000080148 #23	nr1h5 (ENSCCRG00000033773)	slc66a1 (ENSCCRG00000039619)	trim33 (ENSCCRG00000039631)	bcas2 (ENSCCRG00000002803)	DENND2C (ENSCCRG00000047745)	ampd1 (ENSCCRG00000047768)	ENSCCRG00000048983	ENSCCRG00000063487	unc45b (ENSCCRG00000049038)	pip5k1bb (ENSCCRG00000050000)	fxn (ENSCCRG00000027661)	tjp2b (ENSCCRG00000017522)	fnbp1a (ENSCCRG00000025912)	ift81 (ENSCCRG00000025834)
Golden-line barbel	MODERN SPECIES	258													pim1 (ENSSGRG00000023841)	TBC1D22B (ENSSGRG00000023847)	ENSSGRG00000023925	MAPK13 (ENSSGRG00000023927) #22	BRPF3 (ENSSGRG00000024044) #23	nr1h5 (ENSSGRG00000024110)	slc66a1 (ENSSGRG00000024111)	trim33 (ENSSGRG00000024119)	bcas2 (ENSSGRG00000024983)	DENND2C (ENSSGRG00000024986)	ampd1 (ENSSGRG00000024995)	nras (ENSSGRG00000025220)	ENSSGRG00000025302	plekha2 (ENSSGRG00000025304)	ENSSGRG00000025311	unc45b (ENSSGRG00000025321)	pip5k1bb (ENSSGRG00000025322)	fxn (ENSSGRG00000025323)	tjp2b (ENSSGRG00000025325)
Goldfish	MODERN SPECIES	48	slc35a2 (ENSCARG00000009092)	bcap31 (ENSCARG00000009086)	slc6a8 (ENSCARG00000007521)	ENSCARG00000007441	plxna3 (ENSCARG00000006861)	ptpn18 (ENSCARG00000006767)	MON1B (ENSCARG00000006753)	gripap1 (ENSCARG00000006684)	kcnd1 (ENSCARG00000006660)	ENSCARG00000006650	ENSCARG00000006645	ENSCARG00000006622	pim1 (ENSCARG00000006574)	TBC1D22B (ENSCARG00000006284)	ENSCARG00000006235	MAPK13 (ENSCARG00000006095) #22	BRPF3 (ENSCARG00000006032) #23	nr1h5 (ENSCARG00000014410)	slc66a1 (ENSCARG00000014370)	trim33 (ENSCARG00000012635)	bcas2 (ENSCARG00000012570)	DENND2C (ENSCARG00000012559)	ampd1 (ENSCARG00000010146)	nras (ENSCARG00000010067)	ASB13 (ENSCARG00000010058)	plekha2 (ENSCARG00000010052)	ENSCARG00000009988	unc45b (ENSCARG00000009965)	ENSCARG00000009958	pip5k1bb (ENSCARG00000009903)	fxn (ENSCARG00000009895)
Cyprininae	ANCESTRAL SPECIES	111	ENSGT00940000165528.c	ENSGT00940000158963.b.b.a	ENSGT00940000163427.c.ab.a	ENSGT00950000182827.B.d	ENSGT00390000011863.c.p	ENSGT00940000155869.d	ENSGT01050000244850.A.a.o.a.d	ENSGT00940000164289.a.b	ENSGT00720000108868.d	ENSGT00940000155472.a.a.b	ENSGT00950000183145.A.b.b.b	ENSGT00940000166296.b	ENSGT00940000153394.c.a.a	ENSGT00940000157472.a	ENSGT00940000160682.a.a.b	ENSGT00940000159584.h #22	ENSGT00940000155056.a.b #23	ENSGT00940000166498.f	ENSGT00390000003344.b	ENSGT00940000156361.B.a	ENSGT00390000014494.ac	ENSGT00950000182931.B.a.b.d	ENSGT00950000183011.c.a.a.g	ENSGT00940000158947.a	ENSGT00940000158064.i	ENSGT00530000063735.b.c	ENSGT00940000157654.d	ENSGT00940000156639.c.b	ENSGT00390000005811.`b	ENSGT00940000158634.a.b	ENSGT00940000154745.a
Goldfish	MODERN SPECIES	1857	otud5a (ENSCARG00000047780)	pim2 (ENSCARG00000047698)	slc35a2 (ENSCARG00000047678)	bcap31 (ENSCARG00000047662)	slc6a8 (ENSCARG00000047363)	ENSCARG00000047350	plxna3 (ENSCARG00000046997)	ptpn18 (ENSCARG00000046896)	gripap1 (ENSCARG00000046818)	kcnd1 (ENSCARG00000046801)	ENSCARG00000046795	ENSCARG00000046788	pim1 (ENSCARG00000046776)	TBC1D22B (ENSCARG00000044309)	ENSCARG00000044217	ENSCARG00000044137 #22	BRPF3 (ENSCARG00000043076) #23	nr1h5 (ENSCARG00000042964)	slc66a1 (ENSCARG00000042943)	trim33 (ENSCARG00000040523)	bcas2 (ENSCARG00000040369)	DENND2C (ENSCARG00000040328)
Cyprininae_a	ANCESTRAL SPECIES	111	ENSGT00940000157571.b	ENSGT00940000165528.c	ENSGT00940000158963.b.b.a	ENSGT00950000182827.B.d	ENSGT00390000011863.c.p	ENSGT00940000155869.d	ENSGT01050000244850.A.a.o.a.d	ENSGT00940000164289.a.b	ENSGT00720000108868.d	ENSGT00940000155472.a.a.b	ENSGT00950000183145.A.b.b.b	ENSGT00940000166296.b	ENSGT00940000153394.c.a.a	ENSGT00940000157472.a	ENSGT00940000160682.a.a.b	ENSGT00940000159584.h #22	ENSGT00940000155056.a.b #23	ENSGT00940000166498.f	ENSGT00940000156361.B.a	ENSGT00390000014494.ac	ENSGT00950000182931.B.a.b.d	ENSGT00950000183011.c.a.a.g	ENSGT00940000158947.a	ENSGT00940000160326.d	ENSGT00940000158064.i	ENSGT00530000063735.b.c	ENSGT00940000157654.d	ENSGT00940000156639.c.b	ENSGT00390000005811.`b	ENSGT00940000158634.a.b	ENSGT00940000154745.a
Common carp reference	MODERN SPECIES	17	ENSCCRG00000019150	ENSCCRG00000069233	otud5a (ENSCCRG00000077446)	slc35a2 (ENSCCRG00000081173)	slc6a8 (ENSCCRG00000033069)	ENSCCRG00000033025	plxna3 (ENSCCRG00000066638)	ptpn18 (ENSCCRG00000005561)	gripap1 (ENSCCRG00000005400)	kcnd1 (ENSCCRG00000053667)	ENSCCRG00000014243	ENSCCRG00000064380	pim1 (ENSCCRG00000075335)	ENSCCRG00000079299	ENSCCRG00000076474	ENSCCRG00000075014 #22	ENSCCRG00000039605 #23	nr1h5 (ENSCCRG00000039614)	trim33 (ENSCCRG00000029494)	bcas2 (ENSCCRG00000064476)	DENND2C (ENSCCRG00000039666)	ampd1 (ENSCCRG00000039722)	ENSCCRG00000020061	plekha2 (ENSCCRG00000020058)	ENSCCRG00000067607	unc45b (ENSCCRG00000023097)	pip5k1bb (ENSCCRG00000027636)	fxn (ENSCCRG00000053463)	tjp2b (ENSCCRG00000031373)	si:ch211-248e11.2 (ENSCCRG00000074812)	atp2a2a (ENSCCRG00000056384)
Golden-line barbel	MODERN SPECIES	1522																MAPK13 (ENSSGRG00000021220) #22	BRPF3 (ENSSGRG00000021219) #23	nr1h5 (ENSSGRG00000021218)	ENSSGRG00000021217	ENSSGRG00000021216	trim33 (ENSSGRG00000020794)	bcas2 (ENSSGRG00000020782)
Zebrafish	MODERN SPECIES	23	ENSDARG00000093019	slc35a2 (ENSDARG00000058990)	bcap31 (ENSDARG00000044972)	slc6a8 (ENSDARG00000043646)	ENSDARG00000043648	plxna3 (ENSDARG00000007172)	ptpn18 (ENSDARG00000006308)	MON1B (ENSDARG00000035686)	gripap1 (ENSDARG00000063069)	kcnd1 (ENSDARG00000074746)	ENSDARG00000069542	ENSDARG00000058944	pim1 (ENSDARG00000100020)	TBC1D22B (ENSDARG00000026988)	ENSDARG00000068100	ENSDARG00000058470 #22	BRPF3 (ENSDARG00000074238) #23	nr1h5 (ENSDARG00000031046)	ENSDARG00000117077	slc66a1 (ENSDARG00000043624)	trim33 (ENSDARG00000016181)	bcas2 (ENSDARG00000043631)	DENND2C (ENSDARG00000073738)	ampd1 (ENSDARG00000033832)	nras (ENSDARG00000038225)	ASB13 (ENSDARG00000089833)	plekha2 (ENSDARG00000078221)	ENSDARG00000074168	unc45b (ENSDARG00000008433)	pip5k1bb (ENSDARG00000006508)	fxn (ENSDARG00000074356)
Euteleosteomorpha	ANCESTRAL SPECIES	61									ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00760000119531	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000168345	ENSGT01010000222287.A	ENSGT00390000001400	ENSGT00940000160734.d	ENSGT00390000016392
Acanthomorphata	ANCESTRAL SPECIES	255									ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00760000119531	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT00500000045021.d	ENSGT00940000157087.a.b	ENSGT00940000165103.a	ENSGT00950000183106.b
Percomorphaceae	ANCESTRAL SPECIES	25	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l
Tiger tail seahorse	MODERN SPECIES	213															ENSHCOG00000004007	MAPK13 (ENSHCOG00000003994) #22	BRPF3 (ENSHCOG00000003967) #23	nr1h5 (ENSHCOG00000003934)	slc66a1 (ENSHCOG00000003902)	trim33 (ENSHCOG00000003888)	bcas2 (ENSHCOG00000003813)	otud3 (ENSHCOG00000003777)	TMEM240 (ENSHCOG00000003753)	SDHB (ENSHCOG00000003737)	atp13a2 (ENSHCOG00000003709)	szrd1 (ENSHCOG00000003607)	tgm2a (ENSHCOG00000003547)	kif5aa (ENSHCOG00000002994)	ENSHCOG00000002964	stac3 (ENSHCOG00000002954)	ENSHCOG00000002947
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Aplocheiloidei	ANCESTRAL SPECIES		ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Mangrove rivulus	MODERN SPECIES	18	vwa1 (ENSKMAG00000005979)	TMCO4 (ENSKMAG00000005895)	HTR6 (ENSKMAG00000005867)	ENSKMAG00000005847	SIKE1 (ENSKMAG00000005832)	csde1 (ENSKMAG00000005685)	ENSKMAG00000005635	ampd1 (ENSKMAG00000005597)	DENND2C (ENSKMAG00000005555)	RNF223 (ENSKMAG00000005538)	ptpn11b (ENSKMAG00000005510)	agrn (ENSKMAG00000005430)	angptl7 (ENSKMAG00000005393)	mtor (ENSKMAG00000005214)	ENSKMAG00000005166	ENSKMAG00000005118 #22	BRPF3 (ENSKMAG00000005040) #23	nr1h5 (ENSKMAG00000005012)	slc66a1 (ENSKMAG00000005001)	trim33 (ENSKMAG00000004948)	bcas2 (ENSKMAG00000004912)	otud3 (ENSKMAG00000004897)	TMEM240 (ENSKMAG00000004878)	SDHB (ENSKMAG00000004844)	atp13a2 (ENSKMAG00000004772)	atp13a2 (ENSKMAG00000004694)	szrd1 (ENSKMAG00000004662)	ENSKMAG00000004650	cdk11b (ENSKMAG00000004628)	MMP23B (ENSKMAG00000004610)	ubiad1 (ENSKMAG00000004601)
Turquoise killifish	MODERN SPECIES	1624	KLHL10 (ENSNFUG00015005583)	kcnq2a (ENSNFUG00015005616)	PREX1 (ENSNFUG00015005878)	RALGAPB (ENSNFUG00015007064)	VWA1 (ENSNFUG00015007123)	TMCO4 (ENSNFUG00015007135)	HTR6 (ENSNFUG00015007141)	ENSNFUG00015007145	SIKE1 (ENSNFUG00015007150)	csde1 (ENSNFUG00015007295)	agrn (ENSNFUG00015008539)	ENSNFUG00015015207	mtor (ENSNFUG00015015285)	ANGPTL7 (ENSNFUG00015015497)	ENSNFUG00015015519	MAPK13 (ENSNFUG00015015554) #22	BRPF3 (ENSNFUG00015015625) #23	NR1H5 (ENSNFUG00015015639)	PQLC2 (ENSNFUG00015015687)	ythdf1 (ENSNFUG00015015704)	SCRT2 (ENSNFUG00015015725)	TMEM189 (ENSNFUG00015015737)	CEBPB (ENSNFUG00015015773)	ptpn1 (ENSNFUG00015015787)	KLHL12 (ENSNFUG00015015811)	ENSNFUG00015015829	KDM5B (ENSNFUG00015016049)	ATP13A2 (ENSNFUG00015019337)	SDHB (ENSNFUG00015019414)	TMEM240 (ENSNFUG00015019420)	OTUD3 (ENSNFUG00015019423)
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00390000009842	ENSGT00950000182945.b.a.a.a.b.b.c.b	ENSGT00390000016016.B	ENSGT00410000025596.a.a	ENSGT00950000183149.B	ENSGT00940000158197.d.d	ENSGT00390000000020.a	ENSGT00390000003022	ENSGT00940000159173	ENSGT00390000003809	ENSGT00940000166636	ENSGT00940000156792.g.b	ENSGT00390000012490	ENSGT00940000164599.j.a.a.a	ENSGT00940000157867.a.b	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097.g
Poecilia	ANCESTRAL SPECIES	26	ENSGT00390000009842	ENSGT00950000182945.b.a.a.a.b.b.c.b	ENSGT00390000016016.B	ENSGT00410000025596.a.a	ENSGT00950000183149.B	ENSGT00940000158197.d.d	ENSGT00390000000020.a	ENSGT00390000003022	ENSGT00940000159173	ENSGT00390000003809	ENSGT00940000166636	ENSGT00940000156792.g.b	ENSGT00390000012490	ENSGT00940000164599.j.a.a.a	ENSGT00940000157867.a.b	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097.g
NAME_6	ANCESTRAL SPECIES	91	ENSGT00390000009842	ENSGT00950000182945.b.a.a.a.b.b.c.b	ENSGT00390000016016.B	ENSGT00410000025596.a.a	ENSGT00950000183149.B	ENSGT00940000158197.d.d	ENSGT00390000000020.a	ENSGT00390000003022	ENSGT00940000159173	ENSGT00390000003809	ENSGT00940000166636	ENSGT00940000156792.g.b	ENSGT00390000012490	ENSGT00940000164599.j.a.a.a	ENSGT00940000157867.a.b	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097.g
Sailfin molly	MODERN SPECIES	256							STK35 (ENSPLAG00000006207)	ENSPLAG00000006251	ndufb11 (ENSPLAG00000006268)	tbc1d25 (ENSPLAG00000006294)	ccdc22 (ENSPLAG00000006333)	slc38a5b (ENSPLAG00000006398)	slc2a1a (ENSPLAG00000006430)	mthfr (ENSPLAG00000006483)	KCNAB2 (ENSPLAG00000006544)	ENSPLAG00000006596 #22	BRPF3 (ENSPLAG00000006665) #23	nr1h5 (ENSPLAG00000006695)	slc66a1 (ENSPLAG00000006713)	trim33 (ENSPLAG00000006769)	bcas2 (ENSPLAG00000006822)	otud3 (ENSPLAG00000006852)	TMEM240 (ENSPLAG00000006869)	SDHB (ENSPLAG00000006895)	atp13a2 (ENSPLAG00000006926)	szrd1 (ENSPLAG00000006954)	ENSPLAG00000000145	cdk11b (ENSPLAG00000007045)	MMP23B (ENSPLAG00000007082)	ubiad1 (ENSPLAG00000007090)	mib2 (ENSPLAG00000007112)
Amazon molly	MODERN SPECIES	505															ENSPFOG00000016275	ENSPFOG00000016209 #22	BRPF3 (ENSPFOG00000016155) #23	nr1h5 (ENSPFOG00000016102)	slc66a1 (ENSPFOG00000016097)	trim33 (ENSPFOG00000016002)	bcas2 (ENSPFOG00000015978)	otud3 (ENSPFOG00000015964)	TMEM240 (ENSPFOG00000015961)	SDHB (ENSPFOG00000015918)	atp13a2 (ENSPFOG00000015841)	szrd1 (ENSPFOG00000015823)	ENSPFOG00000022072	cdk11b (ENSPFOG00000015789)	MMP23B (ENSPFOG00000015725)	ubiad1 (ENSPFOG00000015719)	mib2 (ENSPFOG00000015645)
Guppy	MODERN SPECIES	459	tpx2 (ENSPREG00000008884)	ENSPREG00000008903	tpk2 (ENSPREG00000008930)	GMEB2 (ENSPREG00000008940)	pdyn (ENSPREG00000008965)	stk35 (ENSPREG00000008977)	MTCH1 (ENSPREG00000008998)	ndufb11 (ENSPREG00000009033)	tbc1d25 (ENSPREG00000009072)	ccdc22 (ENSPREG00000009104)	slc38a5b (ENSPREG00000009129)	slc2a1a (ENSPREG00000009148)	mthfr (ENSPREG00000009194)	ENSPREG00000009224	kcnab2b (ENSPREG00000009258)	ENSPREG00000009397 #22	BRPF3 (ENSPREG00000009431) #23	nr1h5 (ENSPREG00000009504)	slc66a1 (ENSPREG00000009542)	trim33 (ENSPREG00000009576)	bcas2 (ENSPREG00000009694)	otud3 (ENSPREG00000009726)	TMEM240 (ENSPREG00000009733)	SDHB (ENSPREG00000009741)	atp13a2 (ENSPREG00000009777)	ENSPREG00000009993	cdk11b (ENSPREG00000010006)	MMP23B (ENSPREG00000010063)	ENSPREG00000010081	ubiad1 (ENSPREG00000010088)	mib2 (ENSPREG00000010109)
Platyfish	MODERN SPECIES		ENSXMAG00000024611	GMEB2 (ENSXMAG00000012852)	pdyn (ENSXMAG00000026772)	stk35 (ENSXMAG00000012847)	MTCH1 (ENSXMAG00000012838)	ndufb11 (ENSXMAG00000012836)	tbc1d25 (ENSXMAG00000027860)	ccdc22 (ENSXMAG00000012774)	slc38a5b (ENSXMAG00000012770)	slc2a1a (ENSXMAG00000012748)	mthfr (ENSXMAG00000012737)	ENSXMAG00000023670	kcnab2b (ENSXMAG00000007677)	ENSXMAG00000025184	ENSXMAG00000024569	MAPK13 (ENSXMAG00000012699) #22	BRPF3 (ENSXMAG00000012687) #23	nr1h5 (ENSXMAG00000012678)	slc66a1 (ENSXMAG00000012669)	trim33 (ENSXMAG00000012634)	bcas2 (ENSXMAG00000012622)	otud3 (ENSXMAG00000012612)	TMEM240 (ENSXMAG00000012610)	SDHB (ENSXMAG00000012600)	atp13a2 (ENSXMAG00000012558)	szrd1 (ENSXMAG00000025502)	ENSXMAG00000029348	cdk11b (ENSXMAG00000012515)	MMP23B (ENSXMAG00000012509)	ubiad1 (ENSXMAG00000012507)	mib2 (ENSXMAG00000012469)
NAME_4	ANCESTRAL SPECIES	41	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714.e	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Sheepshead minnow	MODERN SPECIES	271	TMCO4 (ENSCVAG00000001322)	HTR6 (ENSCVAG00000000863)	ENSCVAG00000001326	SIKE1 (ENSCVAG00000001329)	csde1 (ENSCVAG00000001344)	ENSCVAG00000001353	ampd1 (ENSCVAG00000001361)	DENND2C (ENSCVAG00000001371)	RNF223 (ENSCVAG00000001374)	ptpn11b (ENSCVAG00000001381)	ENSCVAG00000001384	agrn (ENSCVAG00000001393)	angptl7 (ENSCVAG00000001398)	mtor (ENSCVAG00000001414)	ENSCVAG00000001419	MAPK13 (ENSCVAG00000001424) #22	BRPF3 (ENSCVAG00000001437) #23
Mummichog	MODERN SPECIES	2191	HTR6 (ENSFHEG00000010544)	ENSFHEG00000010550	SIKE1 (ENSFHEG00000010567)	csde1 (ENSFHEG00000010799)	ENSFHEG00000010839	ampd1 (ENSFHEG00000010948)	DENND2C (ENSFHEG00000011013)	ENSFHEG00000000734	RNF223 (ENSFHEG00000011048)	ENSFHEG00000011052	ptpn11b (ENSFHEG00000011141)	agrn (ENSFHEG00000011868)	angptl7 (ENSFHEG00000011903)	mtor (ENSFHEG00000012058)	ENSFHEG00000012079	ENSFHEG00000012127 #22	BRPF3 (ENSFHEG00000012223) #23	nr1h5 (ENSFHEG00000012303)	slc66a1 (ENSFHEG00000012317)	trim33 (ENSFHEG00000012379)	bcas2 (ENSFHEG00000012410)	otud3 (ENSFHEG00000012416)	TMEM240 (ENSFHEG00000012433)	SDHB (ENSFHEG00000012444)	atp13a2 (ENSFHEG00000012465)	szrd1 (ENSFHEG00000012478)	ENSFHEG00000012499	cdk11b (ENSFHEG00000012616)	MMP23B (ENSFHEG00000012628)	ubiad1 (ENSFHEG00000012640)	mib2 (ENSFHEG00000012729)
Oryzias	ANCESTRAL SPECIES	4	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345.d	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b.d	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037.h	ENSGT00940000157064.a.a	ENSGT00930000151037.g	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097	ENSGT01030000234571.b.b.b.a.b
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT00940000164988	ENSGT00940000168345.d	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b.d	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037.g	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097	ENSGT01030000234571.b.b.b.a.b
Indian medaka	MODERN SPECIES	23	SIKE1 (ENSOMEG00000015539)	csde1 (ENSOMEG00000015656)	ENSOMEG00000000993	ENSOMEG00000015717	ENSOMEG00000015735	ampd1 (ENSOMEG00000015807)	ENSOMEG00000015863	ENSOMEG00000015880	ptpn11b (ENSOMEG00000015961)	ENSOMEG00000015993	agrn (ENSOMEG00000016348)	mtor (ENSOMEG00000016453)	angptl7 (ENSOMEG00000016482)	ENSOMEG00000016502	ENSOMEG00000016521	MAPK13 (ENSOMEG00000016551) #22	BRPF3 (ENSOMEG00000016628) #23	nr1h5 (ENSOMEG00000016653)	slc66a1 (ENSOMEG00000016676)	trim33 (ENSOMEG00000016791)	bcas2 (ENSOMEG00000016837)	otud3 (ENSOMEG00000016883)	b3gnt7l (ENSOMEG00000016906)	ENSOMEG00000016913	dffb (ENSOMEG00000016939)	ENSOMEG00000016957	ENSOMEG00000017154	ENSOMEG00000017197	phtf1 (ENSOMEG00000017232)	rab7a (ENSOMEG00000017263)	hmces (ENSOMEG00000017291)
Javanese ricefish	MODERN SPECIES	21	TMCO4 (ENSOJAG00000015033)	ENSOJAG00000015026	ENSOJAG00000015019	SIKE1 (ENSOJAG00000015009)	csde1 (ENSOJAG00000013596)	ENSOJAG00000013497	ampd1 (ENSOJAG00000011541)	DENND2C (ENSOJAG00000011464)	ENSOJAG00000011453	ENSOJAG00000011432	ptpn11b (ENSOJAG00000009503)	agrn (ENSOJAG00000007722)	angptl7 (ENSOJAG00000007580)	ENSOJAG00000005701	ENSOJAG00000019125	MAPK13 (ENSOJAG00000018884) #22	ENSOJAG00000018849	BRPF3 (ENSOJAG00000018841) #23	slc66a1 (ENSOJAG00000018777)	trim33 (ENSOJAG00000018336)	bcas2 (ENSOJAG00000018292)	otud3 (ENSOJAG00000018281)	TMEM240 (ENSOJAG00000018265)	SDHB (ENSOJAG00000018234)	ENSOJAG00000018223	atp13a2 (ENSOJAG00000018184)	szrd1 (ENSOJAG00000018167)	cdk11b (ENSOJAG00000016030)	MMP23B (ENSOJAG00000015914)	ubiad1 (ENSOJAG00000015887)	ENSOJAG00000015867
Oryzias_a	ANCESTRAL SPECIES		ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345.d	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b.d	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037.h	ENSGT00940000157064.a.a	ENSGT00930000151037.g	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00390000005532.l	ENSGT00940000159714	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097	ENSGT01030000234571.b.b.b.a.b
Japanese Medaka HdrR	MODERN SPECIES	21	HTR6 (ENSORLG00000023384)	ENSORLG00000024698	SIKE1 (ENSORLG00000000742)	csde1 (ENSORLG00000000707)	ENSORLG00000027709	ampd1 (ENSORLG00000000655)	ENSORLG00000022588	DENND2C (ENSORLG00000000628)	ENSORLG00000023532	ptpn11b (ENSORLG00000000613)	agrn (ENSORLG00000000529)	mtor (ENSORLG00000000484)	angptl7 (ENSORLG00000000502)	mtor (ENSORLG00000026268)	ENSORLG00000000403	ENSORLG00000000393 #22	ENSORLG00000000358 #23	ENSORLG00000030631	slc66a1 (ENSORLG00000000341)	trim33 (ENSORLG00000000325)	bcas2 (ENSORLG00000000287)	otud3 (ENSORLG00000000274)	TMEM240 (ENSORLG00000025885)	ENSORLG00000027590	ENSORLG00000000267	szrd1 (ENSORLG00000000208)	atp13a2 (ENSORLG00000000244)	cdk11b (ENSORLG00000000181)	MMP23B (ENSORLG00000000164)	ubiad1 (ENSORLG00000000160)	mib2 (ENSORLG00000000153)
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Cichlidae	ANCESTRAL SPECIES		ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097	ENSGT00940000160919
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01010000223665	ENSGT00940000159381.c	ENSGT00390000006931	ENSGT01050000244866.D.b.b	ENSGT00940000159472
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	17	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01010000223665	ENSGT00940000159381.c	ENSGT00390000006931	ENSGT01050000244866.D.b.b	ENSGT00940000159472
Haplochromini	ANCESTRAL SPECIES	18	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01010000223665	ENSGT00940000159381.c	ENSGT00390000006931	ENSGT01050000244866.D.b.b	ENSGT00940000159472
Burton s mouthbrooder	MODERN SPECIES	400																MAPK13 (ENSHBUG00000013347) #22	BRPF3 (ENSHBUG00000013302) #23	nr1h5 (ENSHBUG00000013206)	slc66a1 (ENSHBUG00000013144)	trim33 (ENSHBUG00000013123)	bcas2 (ENSHBUG00000013090)	otud3 (ENSHBUG00000013064)	TMEM240 (ENSHBUG00000013053)	SDHB (ENSHBUG00000013034)	atp13a2 (ENSHBUG00000012998)	szrd1 (ENSHBUG00000000375)	ENSHBUG00000012968	ENSHBUG00000012948	ctnnbl1 (ENSHBUG00000012941)	ENSHBUG00000012894	E2F1 (ENSHBUG00000012837)
Haplochromini_A	ANCESTRAL SPECIES	22	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a.e	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01010000223665	ENSGT00940000159381.c	ENSGT00390000006931	ENSGT01050000244866.D.b.b	ENSGT00940000159472
P. nyererei	MODERN SPECIES	334	vwa1 (ENSPNYG00000013596)	TMCO4 (ENSPNYG00000013618)	HTR6 (ENSPNYG00000013635)	micos10 (ENSPNYG00000013653)	SIKE1 (ENSPNYG00000013674)	csde1 (ENSPNYG00000013745)	ENSPNYG00000013856	ampd1 (ENSPNYG00000013894)	DENND2C (ENSPNYG00000013944)	RNF223 (ENSPNYG00000013966)	ptpn11b (ENSPNYG00000013984)	agrn (ENSPNYG00000014019)	mtor (ENSPNYG00000014120)	angptl7 (ENSPNYG00000014266)	ENSPNYG00000014286	MAPK13 (ENSPNYG00000014304) #22	BRPF3 (ENSPNYG00000014375) #23	nr1h5 (ENSPNYG00000014485)	slc66a1 (ENSPNYG00000014512)	trim33 (ENSPNYG00000014552)	bcas2 (ENSPNYG00000014636)	otud3 (ENSPNYG00000014657)	TMEM240 (ENSPNYG00000014674)	SDHB (ENSPNYG00000014698)	atp13a2 (ENSPNYG00000014762)	szrd1 (ENSPNYG00000014902)	ENSPNYG00000014908	ENSPNYG00000014928	ctnnbl1 (ENSPNYG00000014941)	ENSPNYG00000015036	E2F1 (ENSPNYG00000015073)
Haplochromini_B	ANCESTRAL SPECIES	103																ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01010000223665	ENSGT00940000159381.c	ENSGT00390000006931	ENSGT01050000244866.D.b.b	ENSGT00940000159472
Eastern happy	MODERN SPECIES	12	SPEN (ENSACLG00000016922)	ENSACLG00000016789	fam131c (ENSACLG00000016745)	clcnk (ENSACLG00000016709)	hspb7 (ENSACLG00000016685)	ZBTB17 (ENSACLG00000016405)	ddost (ENSACLG00000016325)	plekhm2 (ENSACLG00000016188)	ENSACLG00000016105	ARHGEF19 (ENSACLG00000016084)	TTLL10 (ENSACLG00000016030)	mib2 (ENSACLG00000015701)	ubiad1 (ENSACLG00000015663)	MMP23B (ENSACLG00000015649)	cdk11b (ENSACLG00000015393)	MAPK13 (ENSACLG00000015248) #22	BRPF3 (ENSACLG00000015149) #23	ENSACLG00000015142	nr1h5 (ENSACLG00000015116)	slc66a1 (ENSACLG00000015090)	trim33 (ENSACLG00000014913)	ENSACLG00000014902	bcas2 (ENSACLG00000014864)	otud3 (ENSACLG00000014844)	TMEM240 (ENSACLG00000014831)	SDHB (ENSACLG00000014799)	atp13a2 (ENSACLG00000014670)	szrd1 (ENSACLG00000014655)	ENSACLG00000014645	ENSACLG00000014608	ENSACLG00000014582
Zebra mbuna	MODERN SPECIES	395																MAPK13 (ENSMZEG00005028481) #22	BRPF3 (ENSMZEG00005028482) #23	nr1h5 (ENSMZEG00005028483)	slc66a1 (ENSMZEG00005028484)	trim33 (ENSMZEG00005028485)	ENSMZEG00005028486	bcas2 (ENSMZEG00005028487)	otud3 (ENSMZEG00005028489)
Lyretail cichlid	MODERN SPECIES	298	TMCO4 (ENSNBRG00000020883)	HTR6 (ENSNBRG00000020872)	ENSNBRG00000020862	SIKE1 (ENSNBRG00000020856)	znhit1 (ENSNBRG00000020846)	csde1 (ENSNBRG00000020808)	ENSNBRG00000020793	ampd1 (ENSNBRG00000020746)	ENSNBRG00000020707	RNF223 (ENSNBRG00000020697)	ptpn11b (ENSNBRG00000020391)	agrn (ENSNBRG00000020301)	angptl7 (ENSNBRG00000020279)	mtor (ENSNBRG00000020145)	ENSNBRG00000020100	ENSNBRG00000020065 #22	BRPF3 (ENSNBRG00000020043) #23	nr1h5 (ENSNBRG00000020009)	slc66a1 (ENSNBRG00000019982)	trim33 (ENSNBRG00000019952)	bcas2 (ENSNBRG00000019936)	otud3 (ENSNBRG00000019916)	TMEM240 (ENSNBRG00000019901)	SDHB (ENSNBRG00000019876)	atp13a2 (ENSNBRG00000019753)	szrd1 (ENSNBRG00000019730)	ENSNBRG00000019721	VSTM2L (ENSNBRG00000019710)	ctnnbl1 (ENSNBRG00000019662)	ENSNBRG00000019623	E2F1 (ENSNBRG00000019596)
Nile tilapia	MODERN SPECIES	12	TMCO4 (ENSONIG00000009323)	ENSONIG00000009321	ENSONIG00000035010	SIKE1 (ENSONIG00000009319)	csde1 (ENSONIG00000009309)	ENSONIG00000041385	ampd1 (ENSONIG00000009299)	DENND2C (ENSONIG00000009297)	ENSONIG00000034111	RNF223 (ENSONIG00000009295)	ptpn11b (ENSONIG00000009293)	agrn (ENSONIG00000009289)	mtor (ENSONIG00000009275)	angptl7 (ENSONIG00000009286)	ENSONIG00000037033	ENSONIG00000009265 #22	BRPF3 (ENSONIG00000032735) #23	nr1h5 (ENSONIG00000009252)	slc66a1 (ENSONIG00000009250)	trim33 (ENSONIG00000009236)	bcas2 (ENSONIG00000009234)	otud3 (ENSONIG00000009233)	TMEM240 (ENSONIG00000009232)	SDHB (ENSONIG00000009225)	atp13a2 (ENSONIG00000009218)	szrd1 (ENSONIG00000009217)	ENSONIG00000028043	VSTM2L (ENSONIG00000041739)	ctnnbl1 (ENSONIG00000009214)	ENSONIG00000009213	e2f1 (ENSONIG00000009212)
Midas cichlid	MODERN SPECIES	869	TMCO4 (ENSACIG00000015285)	HTR6 (ENSACIG00000015275)	ENSACIG00000015244	SIKE1 (ENSACIG00000015228)	ENSACIG00000015225	csde1 (ENSACIG00000015175)	ENSACIG00000015161	ampd1 (ENSACIG00000015125)	ENSACIG00000015103	RNF223 (ENSACIG00000015101)	ptpn11b (ENSACIG00000015071)	agrn (ENSACIG00000014994)	angptl7 (ENSACIG00000014964)	mtor (ENSACIG00000014848)	ENSACIG00000014807	MAPK13 (ENSACIG00000014771) #22	BRPF3 (ENSACIG00000014721) #23	nr1h5 (ENSACIG00000014685)	slc66a1 (ENSACIG00000014650)	trim33 (ENSACIG00000014617)	bcas2 (ENSACIG00000014603)	otud3 (ENSACIG00000014568)	TMEM240 (ENSACIG00000014552)	SDHB (ENSACIG00000014532)	atp13a2 (ENSACIG00000014440)	szrd1 (ENSACIG00000014416)	ENSACIG00000014412	cdk11b (ENSACIG00000014379)	MMP23B (ENSACIG00000014363)	ubiad1 (ENSACIG00000014354)	mib2 (ENSACIG00000014211)
Pomacentridae	ANCESTRAL SPECIES	55	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392.n	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Bicolor damselfish	MODERN SPECIES	2003																ENSSPAG00000022654 #22	BRPF3 (ENSSPAG00000022644) #23
Pomacentridae_A	ANCESTRAL SPECIES	35	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392.n	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Amphiprion	ANCESTRAL SPECIES	46	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392.n	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	1317																MAPK13 (ENSAOCG00000020474) #22	BRPF3 (ENSAOCG00000020547) #23	nr1h5 (ENSAOCG00000020595)	slc66a1 (ENSAOCG00000020604)	klf7b (ENSAOCG00000020629)
Clown anemonefish	MODERN SPECIES	734										RNF223 (ENSAOCG00000023628)	ptpn11b (ENSAOCG00000023648)	agrn (ENSAOCG00000023796)	angptl7 (ENSAOCG00000023832)	mtor (ENSAOCG00000023912)	ENSAOCG00000002788	ENSAOCG00000023943 #22
Orange clownfish	MODERN SPECIES	22	ENSAPEG00000007097	ENSAPEG00000007118	SIKE1 (ENSAPEG00000007134)	csde1 (ENSAPEG00000007194)	ENSAPEG00000007373	ampd1 (ENSAPEG00000007395)	DENND2C (ENSAPEG00000007457)	ptpn11b (ENSAPEG00000007583)	ENSAPEG00000007645	ptpn11b (ENSAPEG00000007668)	agrn (ENSAPEG00000007762)	mtor (ENSAPEG00000008291)	angptl7 (ENSAPEG00000008509)	ENSAPEG00000008535	ENSAPEG00000008559	MAPK13 (ENSAPEG00000008580) #22	BRPF3 (ENSAPEG00000008654) #23	nr1h5 (ENSAPEG00000008738)	slc66a1 (ENSAPEG00000008790)	trim33 (ENSAPEG00000008852)	bcas2 (ENSAPEG00000008983)	otud3 (ENSAPEG00000009014)	TMEM240 (ENSAPEG00000009028)	ATAD3A (ENSAPEG00000009044)	SDHB (ENSAPEG00000009114)	atp13a2 (ENSAPEG00000009148)	szrd1 (ENSAPEG00000009438)	ENSAPEG00000009459	cdk11b (ENSAPEG00000009495)	MMP23B (ENSAPEG00000009563)	ubiad1 (ENSAPEG00000009575)
Spiny chromis	MODERN SPECIES	1039										cds2 (ENSAPOG00000012823)	arhgap25 (ENSAPOG00000012847)	bmp10 (ENSAPOG00000012857)	ENSAPOG00000012895	ERLIN2 (ENSAPOG00000012944)	znf703 (ENSAPOG00000013004)	MAPK13 (ENSAPOG00000013097) #22	BRPF3 (ENSAPOG00000000800) #23	nr1h5 (ENSAPOG00000013235)
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Tetraodontidae	ANCESTRAL SPECIES	38	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037.j.b	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097.d
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	vwa1 (ENSTNIG00000010873)	TMCO4 (ENSTNIG00000010874)	ENSTNIG00000010875	ENSTNIG00000010876	SIKE1 (ENSTNIG00000010877)	csde1 (ENSTNIG00000010878)	ENSTNIG00000010879	ampd1 (ENSTNIG00000010880)	DENND2C (ENSTNIG00000010881)	ENSTNIG00000010882	ptpn11b (ENSTNIG00000010883)	agrn (ENSTNIG00000010884)	ENSTNIG00000010885	mtor (ENSTNIG00000010886)	ENSTNIG00000010887	ENSTNIG00000010888 #22	SDHB (ENSTNIG00000010889)	atp13a2 (ENSTNIG00000010890)	szrd1 (ENSTNIG00000010891)	cdk11b (ENSTNIG00000010892)	MMP23B (ENSTNIG00000010893)	ubiad1 (ENSTNIG00000010894)	mib2 (ENSTNIG00000010895)	ENSTNIG00000010896	ENSTNIG00000010897	ARHGEF19 (ENSTNIG00000010898)	ENSTNIG00000010899	plekhm2 (ENSTNIG00000010900)	ddost (ENSTNIG00000010901)	ZBTB17 (ENSTNIG00000010902)	hspb7 (ENSTNIG00000010903)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000004061	ENSTNIG00000004060	ABCA2 (ENSTNIG00000004056)	bag4 (ENSTNIG00000001065)	lsm1 (ENSTNIG00000004055)	star (ENSTNIG00000004054)	ELMOD3 (ENSTNIG00000004053)	ENSTNIG00000004052	ENSTNIG00000004050	stxbp2 (ENSTNIG00000004049)	nelfb (ENSTNIG00000004048)	arrdc1a (ENSTNIG00000000760)	ENSTNIG00000004045	ENSTNIG00000002283	ENSTNIG00000004044	ENSTNIG00000004041 #22	BRPF3 (ENSTNIG00000004040) #23	ENSTNIG00000004039	ENSTNIG00000004038	ENSTNIG00000004037	htr1ab (ENSTNIG00000004036)	ENSTNIG00000004035	ENSTNIG00000004034	snx21 (ENSTNIG00000004031)	ENSTNIG00000000990	CCNJ (ENSTNIG00000004023)	BTAF1 (ENSTNIG00000004022)	ENSTNIG00000004021	ENSTNIG00000004020	ENSTNIG00000004019	exosc6 (ENSTNIG00000004018)
Fugu	MODERN SPECIES	15	TMCO4 (ENSTRUG00000008582)	HTR6 (ENSTRUG00000008418)	ENSTRUG00000008412	sike1 (ENSTRUG00000030693)	csde1 (ENSTRUG00000007996)	ENSTRUG00000031631	ampd1 (ENSTRUG00000007552)	DENND2C (ENSTRUG00000007448)	RNF223 (ENSTRUG00000020331)	ptpn11b (ENSTRUG00000006764)	agrn (ENSTRUG00000006249)	angptl7 (ENSTRUG00000009793)	mtor (ENSTRUG00000009031)	ENSTRUG00000023464	ENSTRUG00000026485	MAPK13 (ENSTRUG00000008627) #22	BRPF3 (ENSTRUG00000008374) #23	nr1h5 (ENSTRUG00000008191)	slc66a1 (ENSTRUG00000008043)	trim33 (ENSTRUG00000007557)	bcas2 (ENSTRUG00000024633)	otud3 (ENSTRUG00000007307)	TMEM240 (ENSTRUG00000025742)	SDHB (ENSTRUG00000007176)	atp13a2 (ENSTRUG00000006519)	szrd1 (ENSTRUG00000006423)	ENSTRUG00000019835	cdk11b (ENSTRUG00000006073)	MMP23B (ENSTRUG00000005977)	ubiad1 (ENSTRUG00000021990)	mib2 (ENSTRUG00000005595)
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Ballan wrasse	MODERN SPECIES	83	vwa1 (ENSLBEG00000015080)	TMCO4 (ENSLBEG00000015047)	HTR6 (ENSLBEG00000015013)	ENSLBEG00000014975	SIKE1 (ENSLBEG00000014938)	csde1 (ENSLBEG00000014770)	ENSLBEG00000014652	ampd1 (ENSLBEG00000014590)	DENND2C (ENSLBEG00000014549)	RNF223 (ENSLBEG00000014526)	ptpn11b (ENSLBEG00000014479)	agrn (ENSLBEG00000014305)	angptl7 (ENSLBEG00000014222)	mtor (ENSLBEG00000014115)	ENSLBEG00000014017	ENSLBEG00000013938 #22	BRPF3 (ENSLBEG00000013860) #23	nr1h5 (ENSLBEG00000013800)	slc66a1 (ENSLBEG00000013762)	trim33 (ENSLBEG00000013662)
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Pike perch	MODERN SPECIES	7	vwa1 (ENSSLUG00000025344)	TMCO4 (ENSSLUG00000025352)	ENSSLUG00000025368	ENSSLUG00000025369	SIKE1 (ENSSLUG00000025370)	csde1 (ENSSLUG00000025415)	ENSSLUG00000025478	ampd1 (ENSSLUG00000025520)	DENND2C (ENSSLUG00000025554)	RNF223 (ENSSLUG00000025560)	ptpn11b (ENSSLUG00000025566)	agrn (ENSSLUG00000025665)	mtor (ENSSLUG00000025759)	angptl7 (ENSSLUG00000025795)	ENSSLUG00000025800	MAPK13 (ENSSLUG00000025806) #22	BRPF3 (ENSSLUG00000025809) #23	nr1h5 (ENSSLUG00000025811)	slc66a1 (ENSSLUG00000025813)	trim33 (ENSSLUG00000025816)	bcas2 (ENSSLUG00000025821)	otud3 (ENSSLUG00000000162)	TMEM240 (ENSSLUG00000000166)	ENSSLUG00000000201	SDHB (ENSSLUG00000000241)	atp13a2 (ENSSLUG00000000385)	szrd1 (ENSSLUG00000000656)	ENSSLUG00000000660	cdk11b (ENSSLUG00000000718)	MMP23B (ENSSLUG00000000879)	ubiad1 (ENSSLUG00000000885)
Channel bull blenny	MODERN SPECIES	21	vwa1 (ENSCGOG00000020237)	TMCO4 (ENSCGOG00000020191)	HTR6 (ENSCGOG00000020186)	ENSCGOG00000020185	SIKE1 (ENSCGOG00000020182)	csde1 (ENSCGOG00000019005)	ENSCGOG00000018979	ampd1 (ENSCGOG00000017617)	DENND2C (ENSCGOG00000017560)	RNF223 (ENSCGOG00000017557)	ptpn11b (ENSCGOG00000016909)	agrn (ENSCGOG00000014988)	angptl7 (ENSCGOG00000014940)	mtor (ENSCGOG00000011183)	ENSCGOG00000011077	MAPK13 (ENSCGOG00000010850) #22	BRPF3 (ENSCGOG00000010830) #23	nr1h5 (ENSCGOG00000010825)	slc66a1 (ENSCGOG00000010822)	trim33 (ENSCGOG00000009637)	bcas2 (ENSCGOG00000009515)	otud3 (ENSCGOG00000009496)	TMEM240 (ENSCGOG00000009486)	ATAD3A (ENSCGOG00000008682)	SDHB (ENSCGOG00000008150)	atp13a2 (ENSCGOG00000008065)	szrd1 (ENSCGOG00000008063)	ENSCGOG00000008057	cdk11b (ENSCGOG00000007934)	MMP23B (ENSCGOG00000007923)	ubiad1 (ENSCGOG00000007922)
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00390000000546	ENSGT00940000157014.e	ENSGT00940000155473.c.a	ENSGT00940000159065.a	ENSGT00940000163428.a.a.b	ENSGT00940000167073	ENSGT00390000000903.b.b	ENSGT01050000244850.A.b.a.b	ENSGT00940000161154.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Stickleback	MODERN SPECIES	11	itchb (ENSGACG00000004740)	ENSGACG00000004753	VDR (ENSGACG00000004763)	twist3 (ENSGACG00000004773)	ENSGACG00000004776	ENSGACG00000004778	PLXNA1 (ENSGACG00000004780)	CHST13 (ENSGACG00000004801)	ptpn11b (ENSGACG00000004807)	agrn (ENSGACG00000004839)	ENSGACG00000004861	ENSGACG00000004864	mtor (ENSGACG00000004869)	angptl7 (ENSGACG00000004901)	ENSGACG00000004910	MAPK13 (ENSGACG00000004911) #22	BRPF3 (ENSGACG00000004924) #23	nr1h5 (ENSGACG00000004938)	slc66a1 (ENSGACG00000004944)	trim33 (ENSGACG00000004973)	bcas2 (ENSGACG00000004981)	otud3 (ENSGACG00000005021)	TMEM240 (ENSGACG00000005027)	ENSGACG00000005033	ATAD3A (ENSGACG00000005036)	SDHB (ENSGACG00000005072)	atp13a2 (ENSGACG00000005124)	szrd1 (ENSGACG00000005166)	cdk11b (ENSGACG00000005177)	MMP23B (ENSGACG00000005198)	ubiad1 (ENSGACG00000005205)
Lumpfish	MODERN SPECIES	22	VDR (ENSCLMG00005021420)	HDAC7 (ENSCLMG00005021433)	ENSCLMG00005000067	ENSCLMG00005000091	ENSCLMG00005000106	chchd6a (ENSCLMG00005000119)	PLXNA1 (ENSCLMG00005000154)	ENSCLMG00005000178	CHST13 (ENSCLMG00005000184)	RNF223 (ENSCLMG00005000189)	ptpn11b (ENSCLMG00005000196)	agrn (ENSCLMG00005000370)	mtor (ENSCLMG00005007384)	angptl7 (ENSCLMG00005010480)	ENSCLMG00005010483	ENSCLMG00005010485 #22	BRPF3 (ENSCLMG00005010506) #23	nr1h5 (ENSCLMG00005010508)	slc66a1 (ENSCLMG00005010524)	trim33 (ENSCLMG00005010526)	bcas2 (ENSCLMG00005010587)	otud3 (ENSCLMG00005010589)	ENSCLMG00005010592	ATAD3A (ENSCLMG00005010599)	SDHB (ENSCLMG00005010609)	atp13a2 (ENSCLMG00005010814)	szrd1 (ENSCLMG00005010908)	ENSCLMG00005010912	cdk11b (ENSCLMG00005010941)	MMP23B (ENSCLMG00005014128)	ubiad1 (ENSCLMG00005014130)
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Large yellow croaker	MODERN SPECIES	487	vwa1 (ENSLCRG00005014560)	TMCO4 (ENSLCRG00005014551)	HTR6 (ENSLCRG00005014550)	ENSLCRG00005014549	SIKE1 (ENSLCRG00005014547)	csde1 (ENSLCRG00005012246)	ENSLCRG00005012205	ampd1 (ENSLCRG00005011483)	DENND2C (ENSLCRG00005011454)	RNF223 (ENSLCRG00005011444)	ENSLCRG00005010078	agrn (ENSLCRG00005007112)	angptl7 (ENSLCRG00005007070)	mtor (ENSLCRG00005006997)	ENSLCRG00005006978	MAPK13 (ENSLCRG00005006968) #22	BRPF3 (ENSLCRG00005006963) #23	nr1h5 (ENSLCRG00005006959)	slc66a1 (ENSLCRG00005006958)	trim33 (ENSLCRG00005006953)	bcas2 (ENSLCRG00005006950)	otud3 (ENSLCRG00005006947)	TMEM240 (ENSLCRG00005006946)	ATAD3A (ENSLCRG00005006903)	SDHB (ENSLCRG00005006667)	atp13a2 (ENSLCRG00005006502)	szrd1 (ENSLCRG00005006491)	ENSLCRG00005006490	cdk11b (ENSLCRG00005004029)	MMP23B (ENSLCRG00005004013)	ubiad1 (ENSLCRG00005004012)
European seabass	MODERN SPECIES	14	vwa1 (ENSDLAG00005023969)	ENSDLAG00005023937	ENSDLAG00005033304	ENSDLAG00005023929	ENSDLAG00005031029	CSDE1 (ENSDLAG00005023227)	ENSDLAG00005023188	ENSDLAG00005022825	DENND2C (ENSDLAG00005032504)	ENSDLAG00005034563	ENSDLAG00005022089	ENSDLAG00005019363	ENSDLAG00005019287	ENSDLAG00005034287	ENSDLAG00005017053	ENSDLAG00005016904 #22	ENSDLAG00005016886 #23	nr1h5 (ENSDLAG00005016862)	slc66a1 (ENSDLAG00005016846)	trim33 (ENSDLAG00005016596)	ENSDLAG00005030653	ENSDLAG00005016579	ENSDLAG00005026527	ENSDLAG00005016300	ENSDLAG00005016007	atp13a2 (ENSDLAG00005014127)	szrd1 (ENSDLAG00005030755)	ENSDLAG00005033030	cdk11b (ENSDLAG00005012222)	ENSDLAG00005012175	ubiad1 (ENSDLAG00005029746)
Gilthead seabream	MODERN SPECIES	21	TMCO4 (ENSSAUG00010023479)	HTR6 (ENSSAUG00010023478)	ENSSAUG00010023475	SIKE1 (ENSSAUG00010023472)	csde1 (ENSSAUG00010023384)	ENSSAUG00010023348	ampd1 (ENSSAUG00010022440)	DENND2C (ENSSAUG00010022420)	RNF223 (ENSSAUG00010022415)	ptpn11b (ENSSAUG00010021325)	agrn (ENSSAUG00010018051)	angptl7 (ENSSAUG00010017945)	mtor (ENSSAUG00010014229)	ENSSAUG00010014137	ENSSAUG00010014134	ENSSAUG00010014128 #22	BRPF3 (ENSSAUG00010014119) #23	nr1h5 (ENSSAUG00010014116)	slc66a1 (ENSSAUG00010014109)	trim33 (ENSSAUG00010012391)	bcas2 (ENSSAUG00010012335)	otud3 (ENSSAUG00010012334)	TMEM240 (ENSSAUG00010012333)	ATAD3A (ENSSAUG00010011858)	SDHB (ENSSAUG00010011676)	atp13a2 (ENSSAUG00010011672)	szrd1 (ENSSAUG00010011668)	ENSSAUG00010011667	cdk11b (ENSSAUG00010008413)	MMP23B (ENSSAUG00010008361)	ubiad1 (ENSSAUG00010008360)
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00730000111059.b	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439
Seriola	ANCESTRAL SPECIES	103										ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841.c	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Greater amberjack	MODERN SPECIES	74							RNF223 (ENSSDUG00000001721)	ptpn11b (ENSSDUG00000001746)	agrn (ENSSDUG00000001803)	ENSSDUG00000001928	ENSSDUG00000001946	ENSSDUG00000001964	mtor (ENSSDUG00000002035)	angptl7 (ENSSDUG00000002355)	ENSSDUG00000002373	MAPK13 (ENSSDUG00000002391) #22	BRPF3 (ENSSDUG00000002454) #23	nr1h5 (ENSSDUG00000002490)	slc66a1 (ENSSDUG00000002582)	trim33 (ENSSDUG00000002633)	bcas2 (ENSSDUG00000002743)	otud3 (ENSSDUG00000002795)	TMEM240 (ENSSDUG00000002804)	SDHB (ENSSDUG00000002824)	atp13a2 (ENSSDUG00000002851)	szrd1 (ENSSDUG00000002888)	ENSSDUG00000002895	cdk11b (ENSSDUG00000002908)	MMP23B (ENSSDUG00000002961)	ubiad1 (ENSSDUG00000002981)	mib2 (ENSSDUG00000003005)
Yellowtail amberjack	MODERN SPECIES	2238																MAPK13 (ENSSLDG00000010007) #22	BRPF3 (ENSSLDG00000010069) #23	nr1h5 (ENSSLDG00000010118)	slc66a1 (ENSSLDG00000010140)	trim33 (ENSSLDG00000010180)	bcas2 (ENSSLDG00000010229)	otud3 (ENSSLDG00000010258)	TMEM240 (ENSSLDG00000010282)	SDHB (ENSSLDG00000010313)	atp13a2 (ENSSLDG00000010408)	szrd1 (ENSSLDG00000010648)	ENSSLDG00000010663	cdk11b (ENSSLDG00000010713)	MMP23B (ENSSLDG00000010797)	ubiad1 (ENSSLDG00000010827)	mib2 (ENSSLDG00000010879)
Barramundi perch	MODERN SPECIES	62	TMCO4 (ENSLCAG00010005868)	HTR6 (ENSLCAG00010005863)	ENSLCAG00010005858	SIKE1 (ENSLCAG00010005854)	csde1 (ENSLCAG00010004839)	ENSLCAG00010004648	ampd1 (ENSLCAG00010004138)	ENSLCAG00010004013	ENSLCAG00010004010	RNF223 (ENSLCAG00010004007)	ENSLCAG00010003921	agrn (ENSLCAG00010002519)	angptl7 (ENSLCAG00010002213)	mtor (ENSLCAG00010002119)	ENSLCAG00010002068	MAPK13 (ENSLCAG00010002062) #22	BRPF3 (ENSLCAG00010002050) #23	nr1h5 (ENSLCAG00010002039)	slc66a1 (ENSLCAG00010002014)	trim33 (ENSLCAG00010001694)	bcas2 (ENSLCAG00010001629)	otud3 (ENSLCAG00010001619)	TMEM240 (ENSLCAG00010001614)	ATAD3A (ENSLCAG00010001605)	SDHB (ENSLCAG00010001559)	atp13a2 (ENSLCAG00010001462)	szrd1 (ENSLCAG00010001418)	ENSLCAG00010001412	cdk11b (ENSLCAG00010001351)	MMP23B (ENSLCAG00010001335)	ubiad1 (ENSLCAG00010001331)
Pleuronectoidei	ANCESTRAL SPECIES	14	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT01010000222287.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Tongue sole	MODERN SPECIES	1	foxj3 (ENSCSEG00000005183)	rimkla (ENSCSEG00000005179)	emp3b (ENSCSEG00000005176)	ENSCSEG00000005166	znf362b (ENSCSEG00000005161)	ENSCSEG00000005150	alas2 (ENSCSEG00000005141)	ENSCSEG00000005104	SLC7A5 (ENSCSEG00000005095)	RNF223 (ENSCSEG00000005091)	ptpn11b (ENSCSEG00000005082)	agrn (ENSCSEG00000005060)	angptl7 (ENSCSEG00000005058)	mtor (ENSCSEG00000005040)	ENSCSEG00000005036	ENSCSEG00000005028 #22	BRPF3 (ENSCSEG00000005002) #23	TMEM240 (ENSCSEG00000004992)	otud3 (ENSCSEG00000004985)	bcas2 (ENSCSEG00000004980)	trim33 (ENSCSEG00000004968)	slc66a1 (ENSCSEG00000004961)	nr1h5 (ENSCSEG00000004953)	atp13a2 (ENSCSEG00000004931)	szrd1 (ENSCSEG00000004927)	ENSCSEG00000004922	cdk11b (ENSCSEG00000004901)	MMP23B (ENSCSEG00000004897)	ubiad1 (ENSCSEG00000004896)	mib2 (ENSCSEG00000004890)	ENSCSEG00000004879
Turbot	MODERN SPECIES	2	ENSSMAG00000031680	mib2 (ENSSMAG00000008387)	ubiad1 (ENSSMAG00000008362)	ENSSMAG00000008352	cdk11b (ENSSMAG00000008291)	ENSSMAG00000025199	ENSSMAG00000036974	ENSSMAG00000008196	ENSSMAG00000008172	ENSSMAG00000008165	ENSSMAG00000008107	ENSSMAG00000007923	ENSSMAG00000007890	ENSSMAG00000007774	ENSSMAG00000037374	ENSSMAG00000007696 #22	ENSSMAG00000007646 #23	nr1h5 (ENSSMAG00000007598)	slc66a1 (ENSSMAG00000007573)	trim33 (ENSSMAG00000007543)	ENSSMAG00000036720	ENSSMAG00000007504	ENSSMAG00000007493	ENSSMAG00000007477	atp13a2 (ENSSMAG00000007454)	szrd1 (ENSSMAG00000007430)	ENSSMAG00000007203	ENSSMAG00000007182	ENSSMAG00000033188	ENSSMAG00000007162	ENSSMAG00000007146
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00390000001400	ENSGT00940000154484.A	ENSGT00940000164988	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000008686	ENSMAMG00000008710	ENSMAMG00000008762	ENSMAMG00000026350	ENSMAMG00000008805	CSDE1 (ENSMAMG00000008821)	ENSMAMG00000028707	ENSMAMG00000008994	DENND2C (ENSMAMG00000013134)	ENSMAMG00000013221	ENSMAMG00000013236	ENSMAMG00000013283	ENSMAMG00000013377	ENSMAMG00000013521	ENSMAMG00000026120	ENSMAMG00000013549 #22	ENSMAMG00000013600 #23	nr1h5 (ENSMAMG00000013617)	slc66a1 (ENSMAMG00000013644)	trim33 (ENSMAMG00000013717)	ENSMAMG00000025896	ENSMAMG00000013878	ENSMAMG00000013884	ENSMAMG00000013910	szrd1 (ENSMAMG00000013944)	ENSMAMG00000013947	cdk11b (ENSMAMG00000013969)	ENSMAMG00000014069	ubiad1 (ENSMAMG00000014083)	mib2 (ENSMAMG00000014100)	ENSMAMG00000014134
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000160734.d	ENSGT00390000001400	ENSGT00940000154484.A	ENSGT00940000168345	ENSGT00390000018003.a	ENSGT00390000016950	ENSGT00950000182839.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182931.B.a.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00930000151037	ENSGT00940000157064.a.a	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT00940000166498	ENSGT00390000003344	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00390000016392	ENSGT00400000023987.d	ENSGT00390000013558.a.b	ENSGT00940000159714	ENSGT00390000005532.l	ENSGT01030000234841	ENSGT00940000158459	ENSGT00940000161187	ENSGT00390000012439	ENSGT00940000158097
Climbing perch	MODERN SPECIES	20	vwa1 (ENSATEG00000003719)	ENSATEG00000003731	ENSATEG00000026807	ENSATEG00000003796	ENSATEG00000003841	CSDE1 (ENSATEG00000003864)	ENSATEG00000029204	ENSATEG00000003961	DENND2C (ENSATEG00000004030)	ENSATEG00000004040	ENSATEG00000004060	ENSATEG00000004139	ENSATEG00000004175	ENSATEG00000004456	ENSATEG00000004494	ENSATEG00000004520 #22	ENSATEG00000004586 #23	nr1h5 (ENSATEG00000004649)	slc66a1 (ENSATEG00000004697)	trim33 (ENSATEG00000004717)	ENSATEG00000026999	ENSATEG00000004825	ENSATEG00000029392	ENSATEG00000004854	atp13a2 (ENSATEG00000004898)	szrd1 (ENSATEG00000027903)	ENSATEG00000004960	cdk11b (ENSATEG00000005002)	ENSATEG00000005073	ubiad1 (ENSATEG00000026486)	mib2 (ENSATEG00000005118)
Siamese fighting fish	MODERN SPECIES	18	TMCO4 (ENSBSLG00000019142)	ENSBSLG00000019100	ENSBSLG00000019084	SIKE1 (ENSBSLG00000019070)	csde1 (ENSBSLG00000016489)	ENSBSLG00000016455	ampd1 (ENSBSLG00000014875)	DENND2C (ENSBSLG00000014757)	RNF223 (ENSBSLG00000014746)	ptpn11b (ENSBSLG00000014153)	ENSBSLG00000013935	agrn (ENSBSLG00000010997)	angptl7 (ENSBSLG00000010382)	mtor (ENSBSLG00000010259)	ENSBSLG00000010242	MAPK13 (ENSBSLG00000009510) #22	BRPF3 (ENSBSLG00000009470) #23	nr1h5 (ENSBSLG00000009457)	slc66a1 (ENSBSLG00000009440)	trim33 (ENSBSLG00000007990)	bcas2 (ENSBSLG00000007797)	otud3 (ENSBSLG00000007756)	TMEM240 (ENSBSLG00000007724)	atp13a2 (ENSBSLG00000006876)	szrd1 (ENSBSLG00000006588)	ENSBSLG00000006563	cdk11b (ENSBSLG00000005431)	MMP23B (ENSBSLG00000004757)	ubiad1 (ENSBSLG00000004732)	mib2 (ENSBSLG00000004064)	TTLL10 (ENSBSLG00000003608)
Pinecone sodierfish	MODERN SPECIES	21	TMCO4 (ENSMMDG00005017921)	ENSMMDG00005017934	ENSMMDG00005017936	SIKE1 (ENSMMDG00005017938)	csde1 (ENSMMDG00005018036)	ENSMMDG00005021853	ampd1 (ENSMMDG00005021870)	DENND2C (ENSMMDG00005022313)	ENSMMDG00005022321	RNF223 (ENSMMDG00005022323)	ptpn11b (ENSMMDG00005022326)	agrn (ENSMMDG00005022344)	mtor (ENSMMDG00005022828)	angptl7 (ENSMMDG00005023356)	ENSMMDG00005023357	MAPK13 (ENSMMDG00005023359) #22	BRPF3 (ENSMMDG00005023365) #23	nr1h5 (ENSMMDG00005023371)	slc66a1 (ENSMMDG00005023377)	trim33 (ENSMMDG00005023394)	bcas2 (ENSMMDG00005023541)	otud3 (ENSMMDG00005023542)	TMEM240 (ENSMMDG00005023544)	ATAD3A (ENSMMDG00005023550)	SDHB (ENSMMDG00005023562)	atp13a2 (ENSMMDG00005023590)	szrd1 (ENSMMDG00005023604)	tmem82 (ENSMMDG00005023607)	sult1st5 (ENSMMDG00005023609)	ENSMMDG00005023611	ENSMMDG00005023616
Cod	MODERN SPECIES		ENSGMOG00000033031	dffb (ENSGMOG00000013261)	ENSGMOG00000022175	ENSGMOG00000015826	ENSGMOG00000025158	ENSGMOG00000026474	ENSGMOG00000022275	ENSGMOG00000003596	ENSGMOG00000018785	NADK (ENSGMOG00000008413)	ENSGMOG00000036919	ENSGMOG00000008410	ENSGMOG00000008407	ENSGMOG00000008405	ENSGMOG00000008404	ENSGMOG00000015911 #22	ENSGMOG00000026487 #23	nr1h5 (ENSGMOG00000015966)	slc66a1 (ENSGMOG00000015992)	trim33 (ENSGMOG00000016005)	bcas2 (ENSGMOG00000014357)	krt8 (ENSGMOG00000014429)	krt18a.1 (ENSGMOG00000000117)	krt18a.2 (ENSGMOG00000028474)	ENSGMOG00000004659	ENSGMOG00000004729	ENSGMOG00000004749	sars1 (ENSGMOG00000004761)	ENSGMOG00000028311	fam50a (ENSGMOG00000004783)	ENSGMOG00000027462
Protacanthopterygii	ANCESTRAL SPECIES	87	ENSGT00950000182970.A.b	ENSGT00940000162635	ENSGT00940000155167.a	ENSGT00390000000732	ENSGT00940000159329	ENSGT00940000160093.b	ENSGT00940000159925	ENSGT00700000104550.a.j.b	ENSGT00940000163259.b	ENSGT00940000153876.A	ENSGT00940000158337	ENSGT00940000154757.xb.a.b	ENSGT00940000157064.a.a	ENSGT00930000151037	ENSGT00940000160682.a	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00940000164692	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00510000047137	ENSGT00940000156136	ENSGT00730000111482	ENSGT00390000017213.B.e	ENSGT00940000155229	ENSGT00390000017213.B.f	ENSGT00940000161602.h	ENSGT00940000161602.g
Salmoninae	ANCESTRAL SPECIES	163						ENSGT00940000159925.d	ENSGT00700000104550.a.j.b.c.b	ENSGT00940000163259.b.e	ENSGT00940000153876.A.f	ENSGT00940000158337.f	ENSGT00940000154757.xb.a.b	ENSGT00940000157064.a.a.c	ENSGT00930000151037	ENSGT00940000157064.a.a.d	ENSGT00940000160682.a.c	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00940000164692.e	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00510000047137.x	ENSGT00940000156136.cb	ENSGT00730000111482	ENSGT00390000017213.B.e	ENSGT00940000155229	ENSGT00940000160408.c.a	ENSGT01030000234571.a.b	ENSGT00940000153341.h
Huchen	MODERN SPECIES	652									ENSHHUG00000047441	ENSHHUG00000047435	ENSHHUG00000047430	angptl7 (ENSHHUG00000047425)	mtor (ENSHHUG00000047291)	ENSHHUG00000047276	ENSHHUG00000047274	MAPK13 (ENSHHUG00000047258) #22	BRPF3 (ENSHHUG00000047250) #23	plod1a (ENSHHUG00000046697)	mfn2 (ENSHHUG00000046635)
Salmoninae_a	ANCESTRAL SPECIES	15	ENSGT00940000160694.g.a	ENSGT01030000234597.a.b.b.f.i.b	ENSGT00940000166655.i	ENSGT00940000156407.a	ENSGT01100000263529.a.a.a.a.b.c.b.g.b	ENSGT00940000159329	ENSGT00940000160093.b	ENSGT00940000159925.c	ENSGT00700000104550.a.j.b.c.a	ENSGT00940000163259.b.f	ENSGT00940000153876.A.e	ENSGT00940000158337.e	ENSGT00930000151037	ENSGT00940000157064.a.a.d	ENSGT00940000160682.a.c	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00940000164692.e	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00510000047137.x	ENSGT00940000156136.cb	ENSGT00730000111482	ENSGT00390000017213.B.e	ENSGT00940000155229	ENSGT00940000160408.c.a	ENSGT01030000234571.a.b	ENSGT00940000153341.h
Salmo	ANCESTRAL SPECIES	39	ENSGT00940000160694.g.a	ENSGT01030000234597.a.b.b.f.i.b	ENSGT00940000166655.i	ENSGT00940000156407.a	ENSGT00940000159329	ENSGT00940000160093.b	ENSGT00940000159925.c	ENSGT00700000104550.a.j.b.c.a	ENSGT00940000163259.b.f	ENSGT00940000153876.A.e	ENSGT00940000158337.e	ENSGT00970000193381.a.a.c.b.a.a.a.b.a	ENSGT00930000151037	ENSGT00940000157064.a.a.d	ENSGT00940000160682.a.c	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00940000164692.e	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00510000047137.x	ENSGT00940000156136.cb.d	ENSGT00730000111482	ENSGT00390000017213.B.e	ENSGT00940000155229	ENSGT00940000160408.c.a	ENSGT01030000234571.a.b	ENSGT00940000153341.h
Atlantic salmon	MODERN SPECIES	6	gmeb2 (ENSSSAG00000068128)	ENSSSAG00000068122	rtel1 (ENSSSAG00000068081)	ENSSSAG00000068064	ENSSSAG00000095512	ENSSSAG00000066450	ENSSSAG00000044871	ENSSSAG00000055414	ENSSSAG00000055221	ENSSSAG00000111976	ENSSSAG00000047358	ENSSSAG00000047263	ENSSSAG00000047251	ENSSSAG00000046715	ENSSSAG00000103364	mapk13 (ENSSSAG00000046558) #22	ENSSSAG00000046331 #23	plod1a (ENSSSAG00000012359)	ENSSSAG00000009334	ENSSSAG00000117394	ENSSSAG00000008848	wrap73 (ENSSSAG00000008742)	ENSSSAG00000007794	rer1 (ENSSSAG00000007735)	tas1r2.1 (ENSSSAG00000007547)	her3 (ENSSSAG00000083530)	gpr153 (ENSSSAG00000007523)	acot7 (ENSSSAG00000007517)	espn (ENSSSAG00000007498)	arhgef16 (ENSSSAG00000007423)	ybx1 (ENSSSAG00000007374)
River trout	MODERN SPECIES	20	rtel1 (ENSSTUG00000039079)	ENSSTUG00000039330	chrna4b (ENSSTUG00000039342)	ENSSTUG00000039356	kcnq2a (ENSSTUG00000039363)	PREX1 (ENSSTUG00000039690)	ENSSTUG00000040565	RNF223 (ENSSTUG00000041542)	ENSSTUG00000041552	ENSSTUG00000041620	agrn (ENSSTUG00000006242)	ENSSTUG00000008016	mtor (ENSSTUG00000008045)	angptl7 (ENSSTUG00000008611)	ENSSTUG00000008620	ENSSTUG00000008624 #22	BRPF3 (ENSSTUG00000008700) #23	plod1a (ENSSTUG00000009059)	mfn2 (ENSSTUG00000014242)	ENSSTUG00000014475	TPRG1L (ENSSTUG00000014585)	wrap73 (ENSSTUG00000014625)	tp73 (ENSSTUG00000014963)	rer1 (ENSSTUG00000015691)	tas1r2.1 (ENSSTUG00000015738)	ENSSTUG00000015983	GPR153 (ENSSTUG00000015989)	acot7 (ENSSTUG00000016001)	espn (ENSSTUG00000016038)	arhgef16 (ENSSTUG00000016065)	ybx1 (ENSSTUG00000016214)
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT00940000160694.g.a	ENSGT01030000234597.a.b.b.f.i.b	ENSGT00940000166655.i	ENSGT00940000156407.a	ENSGT01100000263529.a.a.a.a.b.c.b.g.b	ENSGT00940000159329	ENSGT00940000160093.b	ENSGT00940000159925.c	ENSGT00700000104550.a.j.b.c.a	ENSGT00940000163259.b.f	ENSGT00940000153876.A.e	ENSGT00940000158337.e	ENSGT00930000151037	ENSGT00940000157064.a.a.d	ENSGT00940000160682.a.c	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00940000164692.e	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00510000047137.x	ENSGT00940000156136.cb	ENSGT00730000111482	ENSGT00390000017213.B.e	ENSGT00940000155229	ENSGT00940000160408.c.a	ENSGT01030000234571.a.b	ENSGT00940000153341.h
Rainbow trout	MODERN SPECIES	30	RTEL1 (ENSOMYG00000042792)	TNFRSF6B (ENSOMYG00000042759)	ENSOMYG00000042752	ENSOMYG00000040706	ENSOMYG00000039953	ENSOMYG00000038748	ENSOMYG00000050181	ENSOMYG00000038583	ENSOMYG00000038575	ENSOMYG00000038351	ENSOMYG00000035846	ENSOMYG00000065651	ENSOMYG00000035189	ENSOMYG00000035019	ENSOMYG00000049935	ENSOMYG00000034792 #22	ENSOMYG00000034768 #23	plod1a (ENSOMYG00000025960)	ENSOMYG00000023650	ENSOMYG00000022633	TPRG1L (ENSOMYG00000022527)	wrap73 (ENSOMYG00000022404)	tp73 (ENSOMYG00000021881)	rer1 (ENSOMYG00000021774)	tas1r2.1 (ENSOMYG00000021237)	HES3 (ENSOMYG00000073666)	GPR153 (ENSOMYG00000021139)	ENSOMYG00000053391	acot7 (ENSOMYG00000021122)	ENSOMYG00000021109	espn (ENSOMYG00000021104)
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00950000183149.B	ENSGT00410000025596.a.a.d	ENSGT01030000234597.a.b.b.f.j	ENSGT00950000182970.A.b	ENSGT00940000155167.a.a	ENSGT00940000159329	ENSGT00940000160093.b	ENSGT00940000159925.c	ENSGT00700000104550.a.j.b.c.a	ENSGT00940000163259.b.f	ENSGT00940000153876.A.e	ENSGT00940000158337.e	ENSGT00930000151037	ENSGT00940000157064.a.a.d	ENSGT00940000160682.a.c	ENSGT00940000159584 #22	ENSGT00940000155056.a #23	ENSGT01030000234558.A.a.a.b	ENSGT00390000013727.c	ENSGT00940000164692.e	ENSGT00390000001652.f.a	ENSGT00390000003623	ENSGT00950000183153.c.b.a.b	ENSGT00510000047137.x	ENSGT00940000156136.cb	ENSGT00730000111482	ENSGT00390000017213.B.e	ENSGT00940000155229	ENSGT00940000160408.c.a	ENSGT01030000234571.a.b	ENSGT00940000153341.h
Coho salmon	MODERN SPECIES	8	pdyn (ENSOKIG00005023315)	GMEB2 (ENSOKIG00005023304)	STMN3 (ENSOKIG00005023286)	rtel1 (ENSOKIG00005023147)	ENSOKIG00005023103	chrna4b (ENSOKIG00005023088)	kcnq2a (ENSOKIG00005022541)	PREX1 (ENSOKIG00005040615)	ENSOKIG00005040031	RNF223 (ENSOKIG00005039970)	ENSOKIG00005039623	agrn (ENSOKIG00005031562)	angptl7 (ENSOKIG00005031143)	mtor (ENSOKIG00005030732)	ENSOKIG00005030693	ENSOKIG00005030457 #22	BRPF3 (ENSOKIG00005030204) #23	plod1a (ENSOKIG00005023099)	mfn2 (ENSOKIG00005021705)	ENSOKIG00005020854	TPRG1L (ENSOKIG00005020775)	wrap73 (ENSOKIG00005020703)	tp73 (ENSOKIG00005020492)	rer1 (ENSOKIG00005020445)	tas1r2.1 (ENSOKIG00005019918)	her3 (ENSOKIG00005019861)	GPR153 (ENSOKIG00005019848)	acot7 (ENSOKIG00005019812)	espn (ENSOKIG00005019792)	arhgef16 (ENSOKIG00005019722)	ybx1 (ENSOKIG00005019659)
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	44										RNF223 (ENSOTSG00005042043)	ENSOTSG00005042054	agrn (ENSOTSG00005043827)	mtor (ENSOTSG00005047135)	angptl7 (ENSOTSG00005024701)	ENSOTSG00005024703	ENSOTSG00005024705 #22	BRPF3 (ENSOTSG00005024725) #23	plod1a (ENSOTSG00005024750)	mfn2 (ENSOTSG00005036948)	ENSOTSG00005037254	TPRG1L (ENSOTSG00005037256)	wrap73 (ENSOTSG00005037261)	tp73 (ENSOTSG00005037317)	rer1 (ENSOTSG00005038196)	ENSOTSG00005038198	her3 (ENSOTSG00005039239)	GPR153 (ENSOTSG00005039241)	acot7 (ENSOTSG00005039248)	espn (ENSOTSG00005039257)	espn (ENSOTSG00005039261)	arhgef16 (ENSOTSG00005039270)
Chinook salmon	MODERN SPECIES	7	pdyn (ENSOTSG00005044793)	GMEB2 (ENSOTSG00005044792)	STMN3 (ENSOTSG00005044789)	rtel1 (ENSOTSG00005044781)	ENSOTSG00005044777	chrna4b (ENSOTSG00005044774)	kcnq2a (ENSOTSG00005044725)	PREX1 (ENSOTSG00005044675)	ENSOTSG00005044641	RNF223 (ENSOTSG00005044635)	ENSOTSG00005044115	agrn (ENSOTSG00005042937)	angptl7 (ENSOTSG00005042934)	mtor (ENSOTSG00005042924)	ENSOTSG00005042918	ENSOTSG00005042912 #22	BRPF3 (ENSOTSG00005042911) #23	plod1a (ENSOTSG00005029411)	mfn2 (ENSOTSG00005028934)	ENSOTSG00005028014	TPRG1L (ENSOTSG00005027996)	wrap73 (ENSOTSG00005026945)	tp73 (ENSOTSG00005026914)	rer1 (ENSOTSG00005026909)	ENSOTSG00005026907	her3 (ENSOTSG00005026906)	GPR153 (ENSOTSG00005026905)	acot7 (ENSOTSG00005026899)	espn (ENSOTSG00005026897)	espn (ENSOTSG00005026894)	arhgef16 (ENSOTSG00005026888)
Northern pike	MODERN SPECIES	11	rtel1 (ENSELUG00000003671)	ENSELUG00000003718	zgpat (ENSELUG00000003733)	chrna4b (ENSELUG00000003742)	kcnq2a (ENSELUG00000003819)	PREX1 (ENSELUG00000004100)	ENSELUG00000004270	RNF223 (ENSELUG00000004313)	ENSELUG00000004355	agrn (ENSELUG00000004708)	ENSELUG00000004804	angptl7 (ENSELUG00000004817)	mtor (ENSELUG00000004972)	ENSELUG00000005027	ENSELUG00000005040	MAPK13 (ENSELUG00000005103) #22	BRPF3 (ENSELUG00000005391) #23	mfn2 (ENSELUG00000005449)	ENSELUG00000005506	TPRG1L (ENSELUG00000005531)	wrap73 (ENSELUG00000005581)	tp73 (ENSELUG00000005631)	RER1 (ENSELUG00000032430)	her3 (ENSELUG00000006063)	GPR153 (ENSELUG00000006079)	acot7 (ENSELUG00000006155)	HES2 (ENSELUG00000006183)	HES2 (ENSELUG00000001290)	espn (ENSELUG00000006252)	arhgef16 (ENSELUG00000006277)	ENSELUG00000006300
Spotted gar	MODERN SPECIES	669	ENSLOCG00000011323	guca1e (ENSLOCG00000011312)	guca1b (ENSLOCG00000011305)	irf6 (ENSLOCG00000011297)	zgc:112163 (ENSLOCG00000017936)	TRAF3IP3 (ENSLOCG00000011279)	atp5pb (ENSLOCG00000011269)	eps8l3b (ENSLOCG00000011248)	cpne5a (ENSLOCG00000011204) #35	KIF21B (ENSLOCG00000011178)	srpk1b (ENSLOCG00000011166) #18	LHFPL5 (ENSLOCG00000011154) #17	CLPS (ENSLOCG00000011147) #16	mapk14a (ENSLOCG00000011129) #20	ENSLOCG00000011118	MAPK13 (ENSLOCG00000011102) #22	BRPF3 (ENSLOCG00000011075) #23	TBC1D22B (ENSLOCG00000011057)	ENSLOCG00000011050	pim1 (ENSLOCG00000011041)	ENSLOCG00000011033	ptpn22 (ENSLOCG00000011020)	RSBN1 (ENSLOCG00000011013)	ENSLOCG00000010996	LRIG2 (ENSLOCG00000010986)	ENSLOCG00000010980	ENSLOCG00000010963	ENSLOCG00000010954	PLXNA2 (ENSLOCG00000010923)	ENSLOCG00000010915	ENSLOCG00000017935
Reedfish	MODERN SPECIES	11	ENSECRG00000013347 #34	ENSECRG00000013323	ENSECRG00000013274	ENSECRG00000013242	sars1 (ENSECRG00000013207)	celsr2 (ENSECRG00000013108)	ENSECRG00000013050	ppil1 (ENSECRG00000013023) #36	cpne5a (ENSECRG00000012993) #35	KIF21B (ENSECRG00000012971)	CLPS (ENSECRG00000012947) #16	lhfpl5b (ENSECRG00000012936) #17	ENSECRG00000012924 #18	srpk1b (ENSECRG00000012901) #18	mapk14a (ENSECRG00000012813) #20	MAPK13 (ENSECRG00000012710) #22	BRPF3 (ENSECRG00000012663) #23	ENSECRG00000012640	TBC1D22B (ENSECRG00000012604)	pim1 (ENSECRG00000012562)	ENSECRG00000012536	PTPN22 (ENSECRG00000012468)	RSBN1 (ENSECRG00000012437)	phtf1 (ENSECRG00000012412)	MAGI3 (ENSECRG00000012383)	ENSECRG00000012344	ENSECRG00000012315	ENSECRG00000012284	ENSECRG00000007168	LGR6 (ENSECRG00000007117)	ube2t (ENSECRG00000007106)