Glires	ANCESTRAL SPECIES	24	ENSGT00390000016168.a	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b #9	ENSGT00950000183087.A.a.b.b.g ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925
Rodentia	ANCESTRAL SPECIES	12	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.a #11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.a #11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012.s #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000011072	ENSGT00440000033985	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722	ENSGT00940000155925
Marmotini	ANCESTRAL SPECIES	37	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.a #11	ENSGT00950000183087.B ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012.s #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153505.a.a.c.a	ENSGT00390000011072	ENSGT00960000189879	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722
Marmotini_b	ANCESTRAL SPECIES	26	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.a #11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012.s #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153505.a.a.c.a	ENSGT00390000011072	ENSGT00960000189879	ENSGT00940000154014.a	ENSGT00940000158294	ENSGT00390000014996	ENSGT00550000074870.b	ENSGT00390000014722
Arctic ground squirrel	MODERN SPECIES	214	MYO1G (ENSUPAG00010022057) #7	PURB (ENSUPAG00010022054) #8	H2AZ2 (ENSUPAG00010022047) #9	ENSUPAG00010022046 #10	ENSUPAG00010022045 #11	ZMIZ2 (ENSUPAG00010022033) #12	OGDH (ENSUPAG00010021984) #13	TMED4 (ENSUPAG00010021975) #14	DDX56 (ENSUPAG00010021974) #15	NPC1L1 (ENSUPAG00010021963) #16	NUDCD3 (ENSUPAG00010021958) #17	CAMK2B (ENSUPAG00010021102) #18	YKT6 (ENSUPAG00010021076) #19	GCK (ENSUPAG00010021047) #20	MYL7 (ENSUPAG00010021036) #21	POLD2 (ENSUPAG00010021026) #22	AEBP1 (ENSUPAG00010020977) #23	POLM (ENSUPAG00010020954) #24	PGAM2 (ENSUPAG00010020948) #25	DBNL (ENSUPAG00010020898) #26
Squirrel	MODERN SPECIES	78	CCM2 (ENSSTOG00000026702)	MYO1G (ENSSTOG00000004101) #7	H2AZ2 (ENSSTOG00000011533) #9	ENSSTOG00000010215 #11	ZMIZ2 (ENSSTOG00000010197) #12	OGDH (ENSSTOG00000000469) #13	TMED4 (ENSSTOG00000014658) #14	DDX56 (ENSSTOG00000000464) #15	NPC1L1 (ENSSTOG00000020879) #16	ENSSTOG00000031145	NUDCD3 (ENSSTOG00000000456) #17	CAMK2B (ENSSTOG00000000450) #18	YKT6 (ENSSTOG00000000448) #19	GCK (ENSSTOG00000002740) #20	MYL7 (ENSSTOG00000002725) #21	POLD2 (ENSSTOG00000002713) #22	AEBP1 (ENSSTOG00000002677) #23	POLM (ENSSTOG00000002662) #24	PGAM2 (ENSSTOG00000008573) #25	DBNL (ENSSTOG00000002644) #26	UBE2D4 (ENSSTOG00000002630)	URGCP (ENSSTOG00000010637)	MRPS24 (ENSSTOG00000032907)	BLVRA (ENSSTOG00000021499)	STK17A (ENSSTOG00000026139)	HECW1 (ENSSTOG00000016043)	MRPL32 (ENSSTOG00000013340)	PSMA2 (ENSSTOG00000013334)	C7orf25 (ENSSTOG00000027844)	GLI3 (ENSSTOG00000020844)	ENSSTOG00000034121
Alpin marmot	MODERN SPECIES	26	CCM2 (ENSMMMG00000014704)	MYO1G (ENSMMMG00000014692) #7	ENSMMMG00000014682	ENSMMMG00000014677	ENSMMMG00000014669 ##11	ZMIZ2 (ENSMMMG00000014533) #12	OGDH (ENSMMMG00000014266) #13	ENSMMMG00000014248 #14	DDX56 (ENSMMMG00000014226) #15	NPC1L1 (ENSMMMG00000014118) #16	NUDCD3 (ENSMMMG00000014107) #17	CAMK2B (ENSMMMG00000012507) #18	YKT6 (ENSMMMG00000012487) #19	GCK (ENSMMMG00000012459) #20	MYL7 (ENSMMMG00000012448) #21	POLD2 (ENSMMMG00000012436) #22	ENSMMMG00000012394 #23	POLM (ENSMMMG00000012375) #24	PGAM2 (ENSMMMG00000012371) #25	DBNL (ENSMMMG00000012313) #26	ENSMMMG00000012291	URGCP (ENSMMMG00000012282)	MRPS24 (ENSMMMG00000012279)	ENSMMMG00000012270	BLVRA (ENSMMMG00000012252)	ENSMMMG00000012217	STK17A (ENSMMMG00000012208)	ENSMMMG00000012200	HECW1 (ENSMMMG00000012160)	ENSMMMG00000012152	MRPL32 (ENSMMMG00000012145)
Eurasian red squirrel	MODERN SPECIES	17	MYO1G (ENSSVLG00005010085) #7	PURB (ENSSVLG00005010055) #8	ENSSVLG00005009916 #9	ENSSVLG00005009853 #11	ZMIZ2 (ENSSVLG00005009754) #12	ENSSVLG00005009696 ##9	OGDH (ENSSVLG00005009410) #13	ENSSVLG00005009279 #14	DDX56 (ENSSVLG00005009218) #15	NPC1L1 (ENSSVLG00005008888) #16	NUDCD3 (ENSSVLG00005008781) #17	CAMK2B (ENSSVLG00005007607) #18	ENSSVLG00005007143 #19	GCK (ENSSVLG00005006971) #20	MYL7 (ENSSVLG00005006900) #21	POLD2 (ENSSVLG00005006846) #22	AEBP1 (ENSSVLG00005006770) #23	POLM (ENSSVLG00005006728) #24	PGAM2 (ENSSVLG00005006699) #25	DBNL (ENSSVLG00005006493) #26	UBE2D4 (ENSSVLG00005006358)	ENSSVLG00005006336	URGCP (ENSSVLG00005006226)	MRPS24 (ENSSVLG00005006180)	ENSSVLG00005006086	BLVRA (ENSSVLG00005006049)	COA1 (ENSSVLG00005006028)	STK17A (ENSSVLG00005005990)	HECW1 (ENSSVLG00005005468)	ENSSVLG00005005320	MRPL32 (ENSSVLG00005005303)
Hystricomorpha	ANCESTRAL SPECIES	17	ENSGT00390000016168.a.o	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.a #11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000161752	ENSGT00950000182890.A.a.b.b.b	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000154631	ENSGT00940000162897	ENSGT00390000008983.b
Hystricomorpha_a	ANCESTRAL SPECIES	16	ENSGT00390000016168.a.o	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.a #11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000161752	ENSGT00950000182890.A.a.b.b.b	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000154631	ENSGT00940000162897	ENSGT00390000008983.b
Hystricomorpha_b	ANCESTRAL SPECIES	38	ENSGT00390000016168.a.o	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.a #11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000161752	ENSGT00950000182890.A.a.b.b.b	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000154631	ENSGT00390000008983.b	ENSGT00940000158139
Long-tailed chinchilla	MODERN SPECIES	163	NACAD (ENSCLAG00000005578)	CCM2 (ENSCLAG00000006017)	MYO1G (ENSCLAG00000004566) #7	ENSCLAG00000007031 #9	ENSCLAG00000006301 ##11	ZMIZ2 (ENSCLAG00000006368) #12	OGDH (ENSCLAG00000016487) #13	TMED4 (ENSCLAG00000011255) #14	DDX56 (ENSCLAG00000007666) #15	NPC1L1 (ENSCLAG00000008529) #16	NUDCD3 (ENSCLAG00000010110) #17	CAMK2B (ENSCLAG00000006106) #18	YKT6 (ENSCLAG00000014974) #19	GCK (ENSCLAG00000004771) #20	MYL7 (ENSCLAG00000009648) #21	POLD2 (ENSCLAG00000005092) #22	AEBP1 (ENSCLAG00000005509) #23	POLM (ENSCLAG00000007360) #24	PGAM2 (ENSCLAG00000004577) #25	DBNL (ENSCLAG00000005058) #26	UBE2D4 (ENSCLAG00000005618)	URGCP (ENSCLAG00000006286)	MRPS24 (ENSCLAG00000004732)	ENSCLAG00000004813	SEPTIN14 (ENSCLAG00000005493)	ZNF713 (ENSCLAG00000007534)	MRPS17 (ENSCLAG00000007650)	NIPSNAP2 (ENSCLAG00000008451)	PSPH (ENSCLAG00000008790)	CCT6A (ENSCLAG00000004434)	ENSCLAG00000005667
Degu	MODERN SPECIES	76	ENSODEG00000013258	MYO1G (ENSODEG00000014298) #7	PURB (ENSODEG00000014570) #8	ENSODEG00000013307 #9	ENSODEG00000014266 #11	ZMIZ2 (ENSODEG00000013173) #12	OGDH (ENSODEG00000013491) #13	TMED4 (ENSODEG00000013873) #14	DDX56 (ENSODEG00000014807) #15	NPC1L1 (ENSODEG00000014236) #16	NUDCD3 (ENSODEG00000014835) #17	CAMK2B (ENSODEG00000014782) #18	ENSODEG00000014119 #19	GCK (ENSODEG00000014198) #20	MYL7 (ENSODEG00000014034) #21	POLD2 (ENSODEG00000014406) #22	AEBP1 (ENSODEG00000015327) #23	POLM (ENSODEG00000015087) #24	PGAM2 (ENSODEG00000014343) #25	DBNL (ENSODEG00000014896) #26	URGCP (ENSODEG00000015352)	MRPS24 (ENSODEG00000016539)	ENSODEG00000020219	SEPTIN14 (ENSODEG00000014211)	ENSODEG00000015145	NIPSNAP2 (ENSODEG00000014015)	PSPH (ENSODEG00000014742)	ENSODEG00000014693	PHKG1 (ENSODEG00000014159)	ENSODEG00000014564	ENSODEG00000020198
Guinea pig	MODERN SPECIES	66	TBRG4 (ENSCPOG00000012294)	ENSCPOG00000020626	CCM2 (ENSCPOG00000009887)	MYO1G (ENSCPOG00000027389) #7	PURB (ENSCPOG00000033652) #8	H2AZ2 (ENSCPOG00000036358) #9	ENSCPOG00000002632 #11	ZMIZ2 (ENSCPOG00000002214) #12	OGDH (ENSCPOG00000003361) #13	TMED4 (ENSCPOG00000030032) #14	DDX56 (ENSCPOG00000003359) #15	NUDCD3 (ENSCPOG00000032095) #17	CAMK2B (ENSCPOG00000019961) #18	YKT6 (ENSCPOG00000039668) #19	GCK (ENSCPOG00000005392) #20	POLD2 (ENSCPOG00000020753) #22	AEBP1 (ENSCPOG00000006383) #23	POLM (ENSCPOG00000014785) #24	PGAM2 (ENSCPOG00000006665) #25	DBNL (ENSCPOG00000006660) #26	UBE2D4 (ENSCPOG00000038086)	URGCP (ENSCPOG00000025608)	MRPS24 (ENSCPOG00000036749)	SEPTIN14 (ENSCPOG00000009996)	ENSCPOG00000038154	NIPSNAP2 (ENSCPOG00000004556)	PSPH (ENSCPOG00000039209)	CCT6A (ENSCPOG00000006992)	SUMF2 (ENSCPOG00000006993)	PHKG1 (ENSCPOG00000000387)	CHCHD2 (ENSCPOG00000012413)
Naked mole-rat female	MODERN SPECIES		CCM2 (ENSHGLG00000017450)	MYO1G (ENSHGLG00000007954) #7	H2AFV (ENSHGLG00000037585) #9	ENSHGLG00000036983	PPIA (ENSHGLG00000040573) ##11	ZMIZ2 (ENSHGLG00000005097) #12	OGDH (ENSHGLG00000008706) #13	TMED4 (ENSHGLG00000019465) #14	DDX56 (ENSHGLG00000017271) #15	NPC1L1 (ENSHGLG00000018856) #16	NUDCD3 (ENSHGLG00000015378) #17	CAMK2B (ENSHGLG00000015797) #18	YKT6 (ENSHGLG00000019116) #19	GCK (ENSHGLG00000019150) #20	MYL7 (ENSHGLG00000018902) #21	POLD2 (ENSHGLG00000014784) #22	POLM (ENSHGLG00000014178) #24	PGAM2 (ENSHGLG00000012441) #25	DBNL (ENSHGLG00000013008) #26	ENSHGLG00000043334	ENSHGLG00000005469	ENSHGLG00000041438	ENSHGLG00000038583	ENSHGLG00000036018	ENSHGLG00000041022	ENSHGLG00000033643	ENSHGLG00000048189	ENSHGLG00000016304	ENSHGLG00000009551	NIPSNAP2 (ENSHGLG00000005574)	PSPH (ENSHGLG00000010095)
Rodentia_B	ANCESTRAL SPECIES	40	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179
Myomorpha	ANCESTRAL SPECIES	50	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179
Muroidea	ANCESTRAL SPECIES	39	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	869	Myo1g (ENSNGAG00000024269) #7	Purb (ENSNGAG00000022961) #8	H2az2 (ENSNGAG00000012708) #9	ENSNGAG00000018529 ##11	Zmiz2 (ENSNGAG00000021083) #12	Ogdh (ENSNGAG00000022300) #13	ENSNGAG00000013628	Tmed4 (ENSNGAG00000014114) #14	Ddx56 (ENSNGAG00000018785) #15	Npc1l1 (ENSNGAG00000023026) #16	Nudcd3 (ENSNGAG00000001892) #17	Camk2b (ENSNGAG00000024309) #18	Ykt6 (ENSNGAG00000021621) #19	Gck (ENSNGAG00000022694) #20	Myl7 (ENSNGAG00000010256) #21	Pold2 (ENSNGAG00000023318) #22	Aebp1 (ENSNGAG00000021547) #23	Polm (ENSNGAG00000024068) #24	Pgam2 (ENSNGAG00000022542) #25	Dbnl (ENSNGAG00000001208) #26	ENSNGAG00000021393	Urgcp (ENSNGAG00000020683)	Mrps24 (ENSNGAG00000021383)	ENSNGAG00000015149	Ccdc117 (ENSNGAG00000012546)	ENSNGAG00000016645
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.a.a ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.a.a.a.b ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b
Cricetinae	ANCESTRAL SPECIES	37	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.b ##11	ENSGT00950000183087.A.a.b.b.g.m.a.a.a.b ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b
Chinese hamster chok1gshd	MODERN SPECIES	121	Myo1g (ENSCGRG00001017997) #7	Purb (ENSCGRG00001000874) #8	H2az2 (ENSCGRG00001004602) #9	PPIA (ENSCGRG00001013904) ##11	Zmiz2 (ENSCGRG00001000371) #12	Ogdh (ENSCGRG00001018679) #13	Tmed4 (ENSCGRG00001020468) #14	Ddx56 (ENSCGRG00001019019) #15	Npc1l1 (ENSCGRG00001005429) #16	ENSCGRG00001023520	Nudcd3 (ENSCGRG00001022901) #17	Camk2b (ENSCGRG00001022679) #18	Ykt6 (ENSCGRG00001017336) #19	Gck (ENSCGRG00001009989) #20	Myl7 (ENSCGRG00001016475) #21	Pold2 (ENSCGRG00001012036) #22	Aebp1 (ENSCGRG00001018686) #23	Polm (ENSCGRG00001014159) #24	Pgam2 (ENSCGRG00001023475) #25	Dbnl (ENSCGRG00001011369) #26	ENSCGRG00001015643	Urgcp (ENSCGRG00001010492)	Mrps24 (ENSCGRG00001009085)	ENSCGRG00001004440
Golden Hamster	MODERN SPECIES	855	ENSMAUG00000012398	Tbrg4 (ENSMAUG00000012673)	Nacad (ENSMAUG00000000441)	Ccm2 (ENSMAUG00000019206)	Purb (ENSMAUG00000011691) #8	H2az2 (ENSMAUG00000004789) #9	ENSMAUG00000019015 ##11	Ogdh (ENSMAUG00000021826) #13	ENSMAUG00000019569 #15	Npc1l1 (ENSMAUG00000014463) #16	ENSMAUG00000018834	Nudcd3 (ENSMAUG00000015962) #17	Camk2b (ENSMAUG00000019715) #18	ENSMAUG00000017858 #19	Gck (ENSMAUG00000003438) #20	Pold2 (ENSMAUG00000008387) #22	Aebp1 (ENSMAUG00000003120) #23	ENSMAUG00000008781 #24	Dbnl (ENSMAUG00000020173) #26	ENSMAUG00000007040	Urgcp (ENSMAUG00000000822)	Mrps24 (ENSMAUG00000011298)	ENSMAUG00000019831
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.a.a.a.a.b ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b
Prairie vole	MODERN SPECIES	89	Ccm2 (ENSMOCG00000010957)	Myo1g (ENSMOCG00000019055) #7	ENSMOCG00000021550 #9	ENSMOCG00000019036 ##11	Zmiz2 (ENSMOCG00000004069) #12	Ogdh (ENSMOCG00000015048) #13	Tmed4 (ENSMOCG00000018994) #14	Ddx56 (ENSMOCG00000016782) #15	Npc1l1 (ENSMOCG00000022891) #16	ENSMOCG00000010822	Nudcd3 (ENSMOCG00000008685) #17	Camk2b (ENSMOCG00000003054) #18	Ykt6 (ENSMOCG00000015485) #19	Gck (ENSMOCG00000007909) #20	Myl7 (ENSMOCG00000001155) #21	Pold2 (ENSMOCG00000020553) #22	Aebp1 (ENSMOCG00000015924) #23	Polm (ENSMOCG00000017650) #24	Pgam2 (ENSMOCG00000017141) #25	Dbnl (ENSMOCG00000010776) #26	ENSMOCG00000007622	ENSMOCG00000019147	Mrps24 (ENSMOCG00000009358)	ENSMOCG00000001805	Ccdc117 (ENSMOCG00000017474)	ENSMOCG00000016607	Znrf3 (ENSMOCG00000007694)	Kremen1 (ENSMOCG00000006589)	Emid1 (ENSMOCG00000007842)	Rhbdd3 (ENSMOCG00000020377)	Ewsr1 (ENSMOCG00000013671)
Northern American deer mouse	MODERN SPECIES	1	Myo1g (ENSPEMG00000013479) #7	ENSPEMG00000018930	Purb (ENSPEMG00000014786) #8	H2az2 (ENSPEMG00000013226) #9	Zmiz2 (ENSPEMG00000010648) #12	Ogdh (ENSPEMG00000001741) #13	ENSPEMG00000030252	Tmed4 (ENSPEMG00000004413) #14	Ddx56 (ENSPEMG00000018351) #15	Npc1l1 (ENSPEMG00000014976) #16	Nudcd3 (ENSPEMG00000014178) #17	Camk2b (ENSPEMG00000000806) #18	Ykt6 (ENSPEMG00000012487) #19	Gck (ENSPEMG00000001040) #20	Myl7 (ENSPEMG00000003767) #21	Pold2 (ENSPEMG00000016023) #22	Polm (ENSPEMG00000013953) #24	Pgam2 (ENSPEMG00000016914) #25	Dbnl (ENSPEMG00000002008) #26	ENSPEMG00000010442	Urgcp (ENSPEMG00000018952)	Mrps24 (ENSPEMG00000012062)	ENSPEMG00000028247	ENSPEMG00000017379	ENSPEMG00000024821	ENSPEMG00000029702	Znrf3 (ENSPEMG00000005713)	Kremen1 (ENSPEMG00000013999)	Emid1 (ENSPEMG00000005971)	Rhbdd3 (ENSPEMG00000006444)	Ewsr1 (ENSPEMG00000018724)
Murinae	ANCESTRAL SPECIES	12	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.a.a ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b
Mus	ANCESTRAL SPECIES	14	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.a.a ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.a.a ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915.r	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.a.a ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915.r	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b.db.a
Mouse	MODERN SPECIES	2	Ccm2 (ENSMUSG00000000378)	Myo1g (ENSMUSG00000020437) #7	Purb (ENSMUSG00000094483) #8	H2az2 (ENSMUSG00000041126) #9	Ppia (ENSMUSG00000071866) ##11	Zmiz2 (ENSMUSG00000041164) #12	Ogdh (ENSMUSG00000020456) #13	Tmed4 (ENSMUSG00000004394) #14	Ddx56 (ENSMUSG00000004393) #15	Npc1l1 (ENSMUSG00000020447) #16	Nudcd3 (ENSMUSG00000053838) #17	Camk2b (ENSMUSG00000057897) #18	Ykt6 (ENSMUSG00000002741) #19	Gck (ENSMUSG00000041798) #20	Myl7 (ENSMUSG00000020469) #21	Pold2 (ENSMUSG00000020471) #22	Aebp1 (ENSMUSG00000020473) #23	Polm (ENSMUSG00000020474) #24	Pgam2 (ENSMUSG00000020475) #25	Dbnl (ENSMUSG00000020476) #26	Urgcp (ENSMUSG00000049680)	Mrps24 (ENSMUSG00000020477)	Ankrd36 (ENSMUSG00000020481)	Ccdc117 (ENSMUSG00000020482)	Xbp1 (ENSMUSG00000020484)	Znrf3 (ENSMUSG00000041961)	Kremen1 (ENSMUSG00000020393)	Emid1 (ENSMUSG00000034164)	Rhbdd3 (ENSMUSG00000034175)	Ewsr1 (ENSMUSG00000009079)	Rasl10a (ENSMUSG00000034209)
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000158053 #7	ENSGT00950000183162.a.b #8	ENSGT00900000140979.a.b.vb #9	ENSGT00950000183087.A.a.b.b.g.m.a.a ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00860000135606	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00950000182787.E.d.e.b #20	ENSGT00940000161682 #21	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000160915.r	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00940000153661.a.b.a.a.a.b	ENSGT00390000005772	ENSGT00390000017751	ENSGT00940000154006.a	ENSGT00940000158390	ENSGT00940000161542	ENSGT00390000013711	ENSGT00940000154191.i.b.db.a
Steppe mouse	MODERN SPECIES	3215	Ccm2 (ENSMSIG00000022897)	Myo1g (ENSMSIG00000022846) #7	ENSMSIG00000022839 #8	H2az2 (ENSMSIG00000022792) #9	ENSMSIG00000022760 ##11	Zmiz2 (ENSMSIG00000022569) #12	Ogdh (ENSMSIG00000022343) #13	Tmed4 (ENSMSIG00000022316) #14	Ddx56 (ENSMSIG00000022266) #15	Npc1l1 (ENSMSIG00000022038) #16	Nudcd3 (ENSMSIG00000021993) #17	Camk2b (ENSMSIG00000019343) #18	ENSMSIG00000019289 #19	Gck (ENSMSIG00000019231) #20	Myl7 (ENSMSIG00000019206) #21	Pold2 (ENSMSIG00000019181) #22	Aebp1 (ENSMSIG00000019091) #23	Polm (ENSMSIG00000019034) #24	Pgam2 (ENSMSIG00000019017) #25	Dbnl (ENSMSIG00000018944) #26	ENSMSIG00000018927	Urgcp (ENSMSIG00000018825)	ENSMSIG00000018806	Ankrd36 (ENSMSIG00000018767)	Ccdc117 (ENSMSIG00000018735)	ENSMSIG00000018714	ENSMSIG00000018656	Emid1 (ENSMSIG00000018580)	Rhbdd3 (ENSMSIG00000018562)	ENSMSIG00000017826	Rasl10a (ENSMSIG00000017813)
spretus	MODERN SPECIES	2	Myo1g (MGP_SPRETEiJ_G0016918) #7	Purb (MGP_SPRETEiJ_G0016917) #8	H2az2 (MGP_SPRETEiJ_G0016916) #9	Ppia (MGP_SPRETEiJ_G0016915) ##11	Zmiz2 (MGP_SPRETEiJ_G0016914) #12	Ogdh (MGP_SPRETEiJ_G0016913) #13	Tmed4 (MGP_SPRETEiJ_G0016912) #14	Ddx56 (MGP_SPRETEiJ_G0016911) #15	Npc1l1 (MGP_SPRETEiJ_G0016910) #16	MGP_SPRETEiJ_G0016909	Nudcd3 (MGP_SPRETEiJ_G0016908) #17	Camk2b (MGP_SPRETEiJ_G0016907) #18	Ykt6 (MGP_SPRETEiJ_G0016906) #19	Gck (MGP_SPRETEiJ_G0016905) #20	Myl7 (MGP_SPRETEiJ_G0016904) #21	Pold2 (MGP_SPRETEiJ_G0016903) #22	Aebp1 (MGP_SPRETEiJ_G0016902) #23	Polm (MGP_SPRETEiJ_G0016901) #24	Pgam2 (MGP_SPRETEiJ_G0016900) #25	Dbnl (MGP_SPRETEiJ_G0016899) #26	Urgcp (MGP_SPRETEiJ_G0016898)	Mrps24 (MGP_SPRETEiJ_G0016897)	Ankrd36 (MGP_SPRETEiJ_G0016896)	Ccdc117 (MGP_SPRETEiJ_G0016895)	MGP_SPRETEiJ_G0016894	Znrf3 (MGP_SPRETEiJ_G0016893)	Kremen1 (MGP_SPRETEiJ_G0016892)	Emid1 (MGP_SPRETEiJ_G0016891)	Rhbdd3 (MGP_SPRETEiJ_G0016890)	Ewsr1 (MGP_SPRETEiJ_G0016889)	Rasl10a (MGP_SPRETEiJ_G0016888)
Ryukyu mouse	MODERN SPECIES	2	Ccm2 (MGP_CAROLIEiJ_G0016077)	Myo1g (MGP_CAROLIEiJ_G0016076) #7	Purb (MGP_CAROLIEiJ_G0016075) #8	H2az2 (MGP_CAROLIEiJ_G0016074) #9	Zmiz2 (MGP_CAROLIEiJ_G0016072) #12	Ogdh (MGP_CAROLIEiJ_G0016071) #13	Tmed4 (MGP_CAROLIEiJ_G0016070) #14	Ddx56 (MGP_CAROLIEiJ_G0016069) #15	Npc1l1 (MGP_CAROLIEiJ_G0016068) #16	MGP_CAROLIEiJ_G0016067	Nudcd3 (MGP_CAROLIEiJ_G0016066) #17	Camk2b (MGP_CAROLIEiJ_G0016065) #18	Ykt6 (MGP_CAROLIEiJ_G0016064) #19	Gck (MGP_CAROLIEiJ_G0016063) #20	Myl7 (MGP_CAROLIEiJ_G0016062) #21	Pold2 (MGP_CAROLIEiJ_G0016061) #22	Aebp1 (MGP_CAROLIEiJ_G0016060) #23	Polm (MGP_CAROLIEiJ_G0016059) #24	Pgam2 (MGP_CAROLIEiJ_G0016058) #25	Dbnl (MGP_CAROLIEiJ_G0016057) #26	Urgcp (MGP_CAROLIEiJ_G0016056)	Mrps24 (MGP_CAROLIEiJ_G0016055)	Ankrd36 (MGP_CAROLIEiJ_G0016054)	Ccdc117 (MGP_CAROLIEiJ_G0016053)	MGP_CAROLIEiJ_G0016052	Znrf3 (MGP_CAROLIEiJ_G0016051)	Kremen1 (MGP_CAROLIEiJ_G0016050)	Emid1 (MGP_CAROLIEiJ_G0016049)	Rhbdd3 (MGP_CAROLIEiJ_G0016048)	Ewsr1 (MGP_CAROLIEiJ_G0016047)	Rasl10a (MGP_CAROLIEiJ_G0016046)
Shrew mouse	MODERN SPECIES	4	MGP_PahariEiJ_G0016815	Purb (MGP_PahariEiJ_G0016816) #8	H2az2 (MGP_PahariEiJ_G0016817) #9	Ppia (MGP_PahariEiJ_G0016818) ##11	Zmiz2 (MGP_PahariEiJ_G0016819) #12	Ogdh (MGP_PahariEiJ_G0016820) #13	Tmed4 (MGP_PahariEiJ_G0016821) #14	Ddx56 (MGP_PahariEiJ_G0016822) #15	Npc1l1 (MGP_PahariEiJ_G0016823) #16	MGP_PahariEiJ_G0016824	Nudcd3 (MGP_PahariEiJ_G0016825) #17	Camk2b (MGP_PahariEiJ_G0016826) #18	Ykt6 (MGP_PahariEiJ_G0016827) #19	Gck (MGP_PahariEiJ_G0016828) #20	Myl7 (MGP_PahariEiJ_G0016829) #21	Pold2 (MGP_PahariEiJ_G0016830) #22	Aebp1 (MGP_PahariEiJ_G0016831) #23	Polm (MGP_PahariEiJ_G0016832) #24	Pgam2 (MGP_PahariEiJ_G0016833) #25	Dbnl (MGP_PahariEiJ_G0016834) #26	Urgcp (MGP_PahariEiJ_G0016835)	Mrps24 (MGP_PahariEiJ_G0016836)	Ankrd36 (MGP_PahariEiJ_G0016837)	Ccdc117 (MGP_PahariEiJ_G0016838)	MGP_PahariEiJ_G0016839	Znrf3 (MGP_PahariEiJ_G0016840)	Kremen1 (MGP_PahariEiJ_G0016841)	Emid1 (MGP_PahariEiJ_G0016842)	Rhbdd3 (MGP_PahariEiJ_G0016843)	Ewsr1 (MGP_PahariEiJ_G0016844)	Gas2l1 (MGP_PahariEiJ_G0016845)
Rat	MODERN SPECIES	5	ENSRNOG00000062895	Purb (ENSRNOG00000069265) #8	AC106663.1 (ENSRNOG00000055372)	H2az2 (ENSRNOG00000052275) #9	Ppia (ENSRNOG00000027864) ##11	Zmiz2 (ENSRNOG00000025923) #12	Ogdh (ENSRNOG00000005130) #13	Tmed4 (ENSRNOG00000005016) #14	Ddx56 (ENSRNOG00000004670) #15	Npc1l1 (ENSRNOG00000049955) #16	Nudcd3 (ENSRNOG00000056148) #17	Camk2b (ENSRNOG00000052080) #18	Ykt6 (ENSRNOG00000014785) #19	Gck (ENSRNOG00000061527) #20	Myl7 (ENSRNOG00000014409) #21	Pold2 (ENSRNOG00000014098) #22	Aebp1 (ENSRNOG00000013720) #23	Polm (ENSRNOG00000013647) #24	Pgam2 (ENSRNOG00000013532) #25	Dbnl (ENSRNOG00000012378) #26	Urgcp (ENSRNOG00000012184)	Mrps24 (ENSRNOG00000011979)	ENSRNOG00000069799	AC136588.2 (ENSRNOG00000030988)	Ankrd36 (ENSRNOG00000056767)	Ccdc117 (ENSRNOG00000010706)	Xbp1 (ENSRNOG00000010298)	Znrf3 (ENSRNOG00000067305)	Kremen1 (ENSRNOG00000051487)	Emid1 (ENSRNOG00000033575)	Rhbdd3 (ENSRNOG00000027032)
Lesser Egyptian jerboa	MODERN SPECIES	49	Ccm2 (ENSJJAG00000019879)	Myo1g (ENSJJAG00000000683) #7	Purb (ENSJJAG00000012921) #8	ENSJJAG00000012094 #9	ENSJJAG00000015423 ##11	Zmiz2 (ENSJJAG00000023115) #12	Ogdh (ENSJJAG00000007589) #13	Tmed4 (ENSJJAG00000005100) #14	Ddx56 (ENSJJAG00000014269) #15	Npc1l1 (ENSJJAG00000019937) #16	Nudcd3 (ENSJJAG00000024120) #17	Camk2b (ENSJJAG00000012313) #18	ENSJJAG00000024358 #19	Gck (ENSJJAG00000020695) #20	Myl7 (ENSJJAG00000023280) #21	Pold2 (ENSJJAG00000013260) #22	Aebp1 (ENSJJAG00000006815) #23	Polm (ENSJJAG00000005659) #24	Pgam2 (ENSJJAG00000006198) #25	Dbnl (ENSJJAG00000019824) #26	ENSJJAG00000013146	ENSJJAG00000016812	Mrps24 (ENSJJAG00000011276)	Smg1 (ENSJJAG00000018008)	ENSJJAG00000017362	ENSJJAG00000021154	Bmper (ENSJJAG00000009850)	Bbs9 (ENSJJAG00000003244)	Phtf2 (ENSJJAG00000007015)	ENSJJAG00000012291	Rsbn1l (ENSJJAG00000017941)
Kangaroo rat	MODERN SPECIES	479	Ramp3 (ENSDORG00000010667)	Tbrg4 (ENSDORG00000013979)	Ccm2 (ENSDORG00000001173)	Myo1g (ENSDORG00000008897) #7	ENSDORG00000000793 ##9	Zmiz2 (ENSDORG00000003702) #12	Ogdh (ENSDORG00000014528) #13	Tmed4 (ENSDORG00000025102) #14	ENSDORG00000026173 #15	Npc1l1 (ENSDORG00000004156) #16	Nudcd3 (ENSDORG00000024793) #17	Camk2b (ENSDORG00000016394) #18	Ykt6 (ENSDORG00000016393) #19	Gck (ENSDORG00000016392) #20	Myl7 (ENSDORG00000016391) #21	Pold2 (ENSDORG00000005386) #22	Aebp1 (ENSDORG00000005385) #23	Polm (ENSDORG00000006893) #24	Pgam2 (ENSDORG00000024532) #25	Dbnl (ENSDORG00000006890) #26	Urgcp (ENSDORG00000009971)	Mrps24 (ENSDORG00000028469)
Lagomorpha	ANCESTRAL SPECIES	146	ENSGT00730000111762	ENSGT01030000234607.A.a.b.a	ENSGT00940000161501	ENSGT00390000016168.a	ENSGT00940000158053 #7	ENSGT00900000140979.a.b #9	ENSGT00950000183087.A.a.a.b ##11	ENSGT01030000234539.b.b.a #12	ENSGT00950000183125.b.a.a #13	ENSGT00940000159012 #14	ENSGT00550000074946 #15	ENSGT00940000159904 #16	ENSGT00940000158444 #17	ENSGT00940000158973.b #18	ENSGT00390000015164 #19	ENSGT00390000006780 #22	ENSGT00940000158323 #23	ENSGT00940000158490 #24	ENSGT00950000182926.b.c #25	ENSGT00940000156732 #26	ENSGT00940000154390.A.j	ENSGT00390000011179
Rabbit	MODERN SPECIES	1	ENSOCUG00000039640 #7	ENSOCUG00000024216 #7	ENSOCUG00000008133 #9	ENSOCUG00000016662 ##11	ZMIZ2 (ENSOCUG00000022046) #12	OGDH (ENSOCUG00000002419) #13	TMED4 (ENSOCUG00000003964) #14	DDX56 (ENSOCUG00000022918) #15	NPC1L1 (ENSOCUG00000023032) #16	ENSOCUG00000023828 #17	ENSOCUG00000021803	ENSOCUG00000002981	ENSOCUG00000001018 #20	ENSOCUG00000036640	AEBP1 (ENSOCUG00000014914) #23	POLD2 (ENSOCUG00000014942) #22	POLM (ENSOCUG00000022428) #24	PGAM2 (ENSOCUG00000027853) #25	ENSOCUG00000027855 #26	ENSOCUG00000031138	ENSOCUG00000010530	ENSOCUG00000021755	ENSOCUG00000033651	SEMA3A (ENSOCUG00000011919)	SEMA3D (ENSOCUG00000012016)	GRM3 (ENSOCUG00000007359)	ELAPOR2 (ENSOCUG00000007364)	DMTF1 (ENSOCUG00000009179)	TMEM243 (ENSOCUG00000009187)	CROT (ENSOCUG00000010544)	ABCB1 (ENSOCUG00000014981)
Pika	MODERN SPECIES	720																POLD2 (ENSOPRG00000006241) #22	AEBP1 (ENSOPRG00000006212) #23	POLM (ENSOPRG00000006193) #24