Amniota	ANCESTRAL SPECIES	4	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32
Mammalia	ANCESTRAL SPECIES	24	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Theria	ANCESTRAL SPECIES	30	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Eutheria	ANCESTRAL SPECIES	7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.a.b ##16	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Boreoeutheria	ANCESTRAL SPECIES	10	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Euarchontoglires	ANCESTRAL SPECIES	10	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Primates	ANCESTRAL SPECIES	9	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Haplorrhini	ANCESTRAL SPECIES	9	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Simiiformes	ANCESTRAL SPECIES	11	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Catarrhini	ANCESTRAL SPECIES	13	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Cercopithecidae	ANCESTRAL SPECIES	9	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00550000074980.b	ENSGT00950000183043.a.b.b.a.b.kb.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Cercopithecinae	ANCESTRAL SPECIES	12	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00550000074980.b	ENSGT00950000183043.a.b.b.a.b.kb.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Vervet Monkey	MODERN SPECIES	3	RMI1 (ENSCSAG00000018503) #7	ENSCSAG00000007560 #8	C9orf64 (ENSCSAG00000007582) #9	KIF27 (ENSCSAG00000007594) #10	GKAP1 (ENSCSAG00000007603) #11	UBQLN1 (ENSCSAG00000007613) #12	IDNK (ENSCSAG00000007619) #13	FRMD3 (ENSCSAG00000007627) #14	RASEF (ENSCSAG00000007663) #15	ENSCSAG00000007683 #16	TLE1 (ENSCSAG00000007687) #17	TLE4 (ENSCSAG00000007699) #18	ENSCSAG00000007705 #19	CEP78 (ENSCSAG00000007718) #20	GNAQ (ENSCSAG00000007724) #21	GNA14 (ENSCSAG00000007735) #22	VPS13A (ENSCSAG00000007781) #23	GCNT1 (ENSCSAG00000018501) #24	RFK (ENSCSAG00000007800) #25	PCSK5 (ENSCSAG00000007915) #26	OSTF1 (ENSCSAG00000007971) #27	NMRK1 (ENSCSAG00000007978) #28	CARNMT1 (ENSCSAG00000007984) #29	C9orf40 (ENSCSAG00000007989) #30	TRPM6 (ENSCSAG00000008115) #31	RORB (ENSCSAG00000008161) #32	ANXA1 (ENSCSAG00000008173) #33	CYP1D1 (ENSCSAG00000008181) #34	ALDH1A1 (ENSCSAG00000008188) #35	TMC1 (ENSCSAG00000008231) #36	ZFAND5 (ENSCSAG00000008265) #37
Cercopithecinae_a	ANCESTRAL SPECIES	12	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00550000074980.b	ENSGT00950000183043.a.b.b.a.b.kb.b #16	ENSGT00950000183043.a.b.b.a.b.kb.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Cercopithecinae_b	ANCESTRAL SPECIES	7	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00550000074980.b	ENSGT00950000183043.a.b.b.a.b.kb.b #16	ENSGT00950000183043.a.b.b.a.b.kb.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347.d #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Olive baboon	MODERN SPECIES	4	UBQLN1 (ENSPANG00000024877) #12	ENSPANG00000024897 #13	ENSPANG00000046148	FRMD3 (ENSPANG00000024898) #14	RASEF (ENSPANG00000024899) #15	ENSPANG00000024906 #16	TLE1 (ENSPANG00000024905) #17	ENSPANG00000024904	ENSPANG00000039137	ENSPANG00000041233	TLE4 (ENSPANG00000024903) #18	ENSPANG00000041116	ENSPANG00000024902 #19	CEP78 (ENSPANG00000024901) #20	GNAQ (ENSPANG00000024900) #21	GNA14 (ENSPANG00000024922) #22	VPS13A (ENSPANG00000024938) #23	ENSPANG00000051369	ENSPANG00000045275	ENSPANG00000049454	PRUNE2 (ENSPANG00000024936)	GCNT1 (ENSPANG00000011524) #24	RFK (ENSPANG00000033522) #25	PCSK5 (ENSPANG00000024934) #26	OSTF1 (ENSPANG00000024933) #27	NMRK1 (ENSPANG00000024931) #28	CARNMT1 (ENSPANG00000024930) #29	ENSPANG00000044337	C9orf40 (ENSPANG00000030522) #30	ENSPANG00000043661	TRPM6 (ENSPANG00000024928) #31
Cercopithecinae_d	ANCESTRAL SPECIES	34	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00550000074980.b	ENSGT00950000183043.a.b.b.a.b.kb.b #16	ENSGT00950000183043.a.b.b.a.b.kb.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347.d #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Drill	MODERN SPECIES	884													ENSMLEG00000001685 #19	CEP78 (ENSMLEG00000018621) #20	GNAQ (ENSMLEG00000029020) #21	GNA14 (ENSMLEG00000031725) #22	ENSMLEG00000043370	VPS13A (ENSMLEG00000029984) #23	PRUNE2 (ENSMLEG00000036315)	GCNT1 (ENSMLEG00000020969) #24	ENSMLEG00000034323 #25	PCSK5 (ENSMLEG00000039394) #26
Sooty mangabey	MODERN SPECIES	629	UBQLN1 (ENSCATG00000041838) #12	IDNK (ENSCATG00000041475) #13	FRMD3 (ENSCATG00000033534) #14	ENSCATG00000021632	ENSCATG00000040297	ENSCATG00000038993 #16	ENSCATG00000021583 ##16	TLE1 (ENSCATG00000033789) #17	TLE4 (ENSCATG00000022648) #18	ENSCATG00000044621 #19	CEP78 (ENSCATG00000036923) #20	ENSCATG00000021563	ENSCATG00000044511	ENSCATG00000003045 #21	ENSCATG00000043408	GNA14 (ENSCATG00000003306) #22	VPS13A (ENSCATG00000036715) #23	ENSCATG00000044702	FOXB2 (ENSCATG00000022251)	PRUNE2 (ENSCATG00000041249)	ENSCATG00000035860 #25	PCSK5 (ENSCATG00000032835) #26	OSTF1 (ENSCATG00000043742) #27	NMRK1 (ENSCATG00000032637) #28	CARNMT1 (ENSCATG00000029180) #29	ENSCATG00000044017	C9orf40 (ENSCATG00000042316) #30	TRPM6 (ENSCATG00000040469) #31	RORB (ENSCATG00000043441) #32	ANXA1 (ENSCATG00000032811) #33	CYP1D1 (ENSCATG00000017926) #34
Macaca	ANCESTRAL SPECIES	10	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00550000074980.b	ENSGT00950000183043.a.b.b.a.b.kb.b #16	ENSGT00950000183043.a.b.b.a.b.kb.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234620.a.a.a.a.a.b.l.a.b	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Pig-tailed macaque	MODERN SPECIES	272	RASEF (ENSMNEG00000044341) #15	ENSMNEG00000039588	ENSMNEG00000040526 #16	ENSMNEG00000037264 ##16	TLE1 (ENSMNEG00000045296) #17	ENSMNEG00000043496	ENSMNEG00000031137	TLE4 (ENSMNEG00000041600) #18	ENSMNEG00000035579 #19	CEP78 (ENSMNEG00000035338) #20	ENSMNEG00000030187	ENSMNEG00000044136	GNAQ (ENSMNEG00000029362) #21	ENSMNEG00000014454	ENSMNEG00000014845	GNA14 (ENSMNEG00000040924) #22	VPS13A (ENSMNEG00000033084) #23	FOXB2 (ENSMNEG00000023676)	PRUNE2 (ENSMNEG00000036658)	GCNT1 (ENSMNEG00000007369) #24	ENSMNEG00000036738 #25	PCSK5 (ENSMNEG00000025347) #26	OSTF1 (ENSMNEG00000040401) #27	NMRK1 (ENSMNEG00000017921) #28	CARNMT1 (ENSMNEG00000042764) #29	ENSMNEG00000040689	C9orf40 (ENSMNEG00000042694) #30	TRPM6 (ENSMNEG00000042106) #31	RORB (ENSMNEG00000042439) #32	ANXA1 (ENSMNEG00000028666) #33	CYP1D1 (ENSMNEG00000037174) #34
Macaca_a	ANCESTRAL SPECIES	10	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b.kb.b #16	ENSGT00950000183043.a.b.b.a.b.kb.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234620.a.a.a.a.a.b.l.a.b	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Rhesus	MODERN SPECIES	6	RASEF (ENSMMUG00000005988) #15	ENSMMUG00000064274	ENSMMUG00000050566	ENSMMUG00000060364	ENSMMUG00000059900	ENSMMUG00000015181 #16	ENSMMUG00000043575 ##16	TLE1 (ENSMMUG00000003718) #17	ENSMMUG00000006148	TLE4 (ENSMMUG00000023365) #18	ENSMMUG00000061519	ENSMMUG00000056840	PSAT1 (ENSMMUG00000011868) #19	CEP78 (ENSMMUG00000013003) #20	GNAQ (ENSMMUG00000055875) #21	GNA14 (ENSMMUG00000019761) #22	VPS13A (ENSMMUG00000019754) #23	FOXB2 (ENSMMUG00000021769)	PRUNE2 (ENSMMUG00000001043)	GCNT1 (ENSMMUG00000060380) #24	RFK (ENSMMUG00000057759) #25	PCSK5 (ENSMMUG00000022023) #26	OSTF1 (ENSMMUG00000010401) #27	NMRK1 (ENSMMUG00000010400) #28	CARNMT1 (ENSMMUG00000010399) #29	TRPM6 (ENSMMUG00000013102) #31	RORB (ENSMMUG00000012571) #32	ENSMMUG00000061106	ANXA1 (ENSMMUG00000012667) #33	CYP1D1 (ENSMMUG00000020548) #34	ALDH1A1 (ENSMMUG00000013303) #35
Crab-eating macaque	MODERN SPECIES	6	GKAP1 (ENSMFAG00000002304) #11	UBQLN1 (ENSMFAG00000038703) #12	IDNK (ENSMFAG00000025314) #13	FRMD3 (ENSMFAG00000042216) #14	RASEF (ENSMFAG00000046414) #15	ENSMFAG00000035600 #16	TLE1 (ENSMFAG00000042116) #17	ENSMFAG00000052030	ENSMFAG00000052460	TLE4 (ENSMFAG00000031817) #18	ENSMFAG00000032662 #19	CEP78 (ENSMFAG00000023050) #20	ENSMFAG00000065595	ENSMFAG00000056118	GNAQ (ENSMFAG00000003921) #21	GNA14 (ENSMFAG00000043028) #22	VPS13A (ENSMFAG00000001206) #23	ENSMFAG00000064329	ENSMFAG00000001184	FOXB2 (ENSMFAG00000017898)	PRUNE2 (ENSMFAG00000046406)	GCNT1 (ENSMFAG00000023079) #24	RFK (ENSMFAG00000044343) #25	ENSMFAG00000064744	PCSK5 (ENSMFAG00000039542) #26	ENSMFAG00000064432	OSTF1 (ENSMFAG00000065664) #27	NMRK1 (ENSMFAG00000002149) #28	CARNMT1 (ENSMFAG00000055475) #29	TRPM6 (ENSMFAG00000042901) #31	RORB (ENSMFAG00000046226) #32
Rhinopithecus	ANCESTRAL SPECIES	197											ENSGT00390000010391.w.a	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.a.a #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Golden snub-nosed monkey	MODERN SPECIES	1158													ENSRROG00000039847 #19	CEP78 (ENSRROG00000040568) #20	GNAQ (ENSRROG00000041250) #21	GNA14 (ENSRROG00000037116) #22	ENSRROG00000027453	ENSRROG00000034738	ENSRROG00000037262 #23
Black snub-nosed monkey	MODERN SPECIES	1096								ENSRBIG00000012060	TLE4 (ENSRBIG00000030332) #18	ENSRBIG00000035546 #19	CEP78 (ENSRBIG00000044796) #20	ENSRBIG00000032897	GNAQ (ENSRBIG00000042001) #21	ENSRBIG00000002072	ENSRBIG00000024188	GNA14 (ENSRBIG00000028274) #22	VPS13A (ENSRBIG00000007952) #23	ENSRBIG00000023197	FOXB2 (ENSRBIG00000030572)	PRUNE2 (ENSRBIG00000040675)	RFK (ENSRBIG00000036195) #25	PCSK5 (ENSRBIG00000039511) #26	OSTF1 (ENSRBIG00000031483) #27	NMRK1 (ENSRBIG00000033112) #28	CARNMT1 (ENSRBIG00000044281) #29	C9orf40 (ENSRBIG00000020651) #30	TRPM6 (ENSRBIG00000012146) #31
Hominoidea	ANCESTRAL SPECIES	23	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.b ##19	ENSGT00390000013287 #20	ENSGT00950000182935.B.a.q.a.a	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Hominidae	ANCESTRAL SPECIES	10	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.b ##19	ENSGT00390000013287 #20	ENSGT00950000182935.B.a.q.a.a	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b.fb #16	ENSGT00950000183043.a.b.b.a.b.gb #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.b ##19	ENSGT00390000013287 #20	ENSGT00950000182935.B.a.q.a.a	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Gorilla	MODERN SPECIES	22	GKAP1 (ENSGGOG00000005564) #11	UBQLN1 (ENSGGOG00000016254) #12	IDNK (ENSGGOG00000023865) #13	FRMD3 (ENSGGOG00000004546) #14	RASEF (ENSGGOG00000006651) #15	ENSGGOG00000043095	ENSGGOG00000022476 ##16	SPATA31D1 (ENSGGOG00000016183) #16	ENSGGOG00000036417 #16	TLE1 (ENSGGOG00000000751) #17	TLE4 (ENSGGOG00000000292) #18	PSAT1 (ENSGGOG00000015480) ##19	CEP78 (ENSGGOG00000001126) #20	ENSGGOG00000007023	ENSGGOG00000037158	GNA14 (ENSGGOG00000013561) #22	VPS13A (ENSGGOG00000022591) #23	FOXB2 (ENSGGOG00000043358)	PRUNE2 (ENSGGOG00000003389)	RFK (ENSGGOG00000037112) #25	PCSK5 (ENSGGOG00000015095) #26	OSTF1 (ENSGGOG00000011920) #27	NMRK1 (ENSGGOG00000011911) #28	CARNMT1 (ENSGGOG00000012752) #29	TRPM6 (ENSGGOG00000011987) #31	RORB (ENSGGOG00000011970) #32	ANXA1 (ENSGGOG00000004678) #33	ALDH1A1 (ENSGGOG00000008563) #35	TMC1 (ENSGGOG00000011002) #36	ZFAND5 (ENSGGOG00000008957) #37	GDA (ENSGGOG00000008537)
Homo/Pan group	ANCESTRAL SPECIES	16	ENSGT00390000002374 #9	ENSGT00940000157487.mb.b #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b.fb #16	ENSGT00950000183043.a.b.b.a.b.gb #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.b ##19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Human	MODERN SPECIES	21	C9orf64 (ENSG00000165118) #9	KIF27 (ENSG00000165115) #10	GKAP1 (ENSG00000165113) #11	UBQLN1 (ENSG00000135018) #12	IDNK (ENSG00000148057) #13	FRMD3 (ENSG00000172159) #14	RASEF (ENSG00000165105) #15	SPATA31D1 (ENSG00000214929) #16	SPATA31D3 (ENSG00000186788) #16	SPATA31D4 (ENSG00000189357) #16	TLE1 (ENSG00000196781) #17	TLE4 (ENSG00000106829) #18	PSAT1 (ENSG00000135069) ##19	CEP78 (ENSG00000148019) #20	GNAQ (ENSG00000156052) #21	GNA14 (ENSG00000156049) #22	VPS13A (ENSG00000197969) #23	FOXB2 (ENSG00000204612)	PRUNE2 (ENSG00000106772)	GCNT1 (ENSG00000187210) #24	RFK (ENSG00000135002) #25	PCSK5 (ENSG00000099139) #26	OSTF1 (ENSG00000134996) #27	NMRK1 (ENSG00000106733) #28	CARNMT1 (ENSG00000156017) #29	C9orf40 (ENSG00000135045) #30	TRPM6 (ENSG00000119121) #31	RORB (ENSG00000198963) #32	ANXA1 (ENSG00000135046) #33	ALDH1A1 (ENSG00000165092) #35	TMC1 (ENSG00000165091) #36
Pan	ANCESTRAL SPECIES	36	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00550000074980.b	ENSGT00950000183043.a.b.b.a.a.a.a.a.a.c.b.b ##16	ENSGT00950000183043.a.b.b.a.b.fb #16	ENSGT00950000183043.a.b.b.a.b.gb #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.b ##19	ENSGT00390000013287 #20	ENSGT00950000182971.C.hb.b	ENSGT00950000182935.B.a.q.a.a	ENSGT00940000161347 #21	ENSGT00510000047030.xb.a.c.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.`b #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Chimpanzee	MODERN SPECIES	22	UBQLN1 (ENSPTRG00000021055) #12	FRMD3 (ENSPTRG00000021053) #14	RASEF (ENSPTRG00000021052) #15	ENSPTRG00000047503	ENSPTRG00000047351	ENSPTRG00000050795 ##16	ENSPTRG00000043940 #16	TLE1 (ENSPTRG00000021048) #17	TLE4 (ENSPTRG00000021047) #18	PSAT1 (ENSPTRG00000021045) ##19	CEP78 (ENSPTRG00000021044) #20	ENSPTRG00000049362	ENSPTRG00000048739	GNAQ (ENSPTRG00000021043) #21	ENSPTRG00000050740	GNA14 (ENSPTRG00000021042) #22	VPS13A (ENSPTRG00000021041) #23	FOXB2 (ENSPTRG00000029242)	PRUNE2 (ENSPTRG00000021038)	GCNT1 (ENSPTRG00000043705) #24	ENSPTRG00000047373	RFK (ENSPTRG00000021036) #25	PCSK5 (ENSPTRG00000021033) #26	OSTF1 (ENSPTRG00000021031) #27	NMRK1 (ENSPTRG00000021030) #28	CARNMT1 (ENSPTRG00000021028) #29	C9H9orf40 (ENSPTRG00000021027) #30	TRPM6 (ENSPTRG00000021026) #31	RORB (ENSPTRG00000021025) #32	ANXA1 (ENSPTRG00000021024) #33	ALDH1A1 (ENSPTRG00000021023) #35
Bonobo	MODERN SPECIES	22	IDNK (ENSPPAG00000027107) #13	FRMD3 (ENSPPAG00000025462) #14	RASEF (ENSPPAG00000042152) #15	ENSPPAG00000032506	ENSPPAG00000033574 ##16	SPATA31D1 (ENSPPAG00000036570) #16	ENSPPAG00000029676 #16	TLE1 (ENSPPAG00000036940) #17	TLE4 (ENSPPAG00000040003) #18	PSAT1 (ENSPPAG00000036829) ##19	CEP78 (ENSPPAG00000040548) #20	ENSPPAG00000034884	ENSPPAG00000042095	GNAQ (ENSPPAG00000028510) #21	ENSPPAG00000042939	ENSPPAG00000040048 #22	VPS13A (ENSPPAG00000005660) #23	ENSPPAG00000041248	PRUNE2 (ENSPPAG00000030555)	GCNT1 (ENSPPAG00000018525) #24	RFK (ENSPPAG00000044017) #25	PCSK5 (ENSPPAG00000027360) #26	OSTF1 (ENSPPAG00000039936) #27	NMRK1 (ENSPPAG00000033100) #28	CARNMT1 (ENSPPAG00000038872) #29	ENSPPAG00000035253 #30	TRPM6 (ENSPPAG00000030433) #31	RORB (ENSPPAG00000027216) #32	ANXA1 (ENSPPAG00000030576) #33	ALDH1A1 (ENSPPAG00000027865) #35	ENSPPAG00000042355
Orangutan	MODERN SPECIES	22	C9orf64 (ENSPPYG00000019326) #9	KIF27 (ENSPPYG00000019325) #10	GKAP1 (ENSPPYG00000019324) #11	UBQLN1 (ENSPPYG00000019323) #12	IDNK (ENSPPYG00000033310) #13	FRMD3 (ENSPPYG00000019321) #14	RASEF (ENSPPYG00000019320) #15	ENSPPYG00000031794 #16	ENSPPYG00000037427 #16	TLE1 (ENSPPYG00000019316) #17	TLE4 (ENSPPYG00000019315) #18	ENSPPYG00000019314	PSAT1 (ENSPPYG00000019313) ##19	CEP78 (ENSPPYG00000019312) #20	GNAQ (ENSPPYG00000019311) #21	GNA14 (ENSPPYG00000019310) #22	VPS13A (ENSPPYG00000019309) #23	PRUNE2 (ENSPPYG00000019305)	GCNT1 (ENSPPYG00000019304) #24	ENSPPYG00000019303	RFK (ENSPPYG00000019302) #25	PCSK5 (ENSPPYG00000019301) #26	OSTF1 (ENSPPYG00000035050) #27	ENSPPYG00000032582	NMRK1 (ENSPPYG00000019299) #28	CARNMT1 (ENSPPYG00000019298) #29	C9orf40 (ENSPPYG00000036469) #30	TRPM6 (ENSPPYG00000019295) #31	RORB (ENSPPYG00000019294) #32	ANXA1 (ENSPPYG00000019293) #33	ALDH1A1 (ENSPPYG00000019292) #35
Gibbon	MODERN SPECIES	10	C9orf64 (ENSNLEG00000003473) #9	KIF27 (ENSNLEG00000003410) #10	GKAP1 (ENSNLEG00000003375) #11	UBQLN1 (ENSNLEG00000003306) #12	IDNK (ENSNLEG00000034109) #13	FRMD3 (ENSNLEG00000003288) #14	RASEF (ENSNLEG00000003245) #15	ENSNLEG00000003238 #16	ENSNLEG00000033199 #16	TLE1 (ENSNLEG00000003182) #17	ENSNLEG00000029249	TLE4 (ENSNLEG00000003084) #18	PSAT1 (ENSNLEG00000002989) ##19	CEP78 (ENSNLEG00000002920) #20	GNAQ (ENSNLEG00000002860) #21	GNA14 (ENSNLEG00000002821) #22	ENSNLEG00000033637	VPS13A (ENSNLEG00000002199) #23	ENSNLEG00000030344	PRUNE2 (ENSNLEG00000002079)	GCNT1 (ENSNLEG00000034138) #24	RFK (ENSNLEG00000035200) #25	PCSK5 (ENSNLEG00000001931) #26	OSTF1 (ENSNLEG00000001854) #27	NMRK1 (ENSNLEG00000001798) #28	CARNMT1 (ENSNLEG00000034652) #29	ENSNLEG00000001769 #30	ENSNLEG00000028548	TRPM6 (ENSNLEG00000001498) #31	RORB (ENSNLEG00000001398) #32	ANXA1 (ENSNLEG00000001203) #33
Platyrrhini	ANCESTRAL SPECIES	8	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158947.v	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.c #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348.d #24	ENSGT00550000075030.n	ENSGT00390000015537.cb #25	ENSGT00940000155770 #26	ENSGT00940000161942.a.a.a.b.b.a.a	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164.i #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Mas night monkey	MODERN SPECIES	703																GNA14 (ENSANAG00000019616) #22	VPS13A (ENSANAG00000034677) #23
Cebidae	ANCESTRAL SPECIES	7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158947.v	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.c #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348.d #24	ENSGT00550000075030.n	ENSGT00390000015537.cb #25	ENSGT00940000155770 #26	ENSGT00940000161942.a.a.a.b.b.a.a	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164.i #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Cebidae_a	ANCESTRAL SPECIES	85	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158947.v	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.k.c #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348.d #24	ENSGT00550000075030.n	ENSGT00390000015537.cb #25	ENSGT00940000155770 #26	ENSGT00940000161942.a.a.a.b.b.a.a	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164.i #31	ENSGT00940000157708 #32
Capuchin	MODERN SPECIES	150										TLE4 (ENSCCAG00000033488) #18	ENSCCAG00000029236 #19	CEP78 (ENSCCAG00000031635) #20	ENSCCAG00000014391	GNAQ (ENSCCAG00000028987) #21	ENSCCAG00000027642	GNA14 (ENSCCAG00000022875) #22	VPS13A (ENSCCAG00000032548) #23	FOXB2 (ENSCCAG00000019520)	PRUNE2 (ENSCCAG00000031291)	ENSCCAG00000017058 #24	ENSCCAG00000034465	ENSCCAG00000026186 #25	PCSK5 (ENSCCAG00000030269) #26	ENSCCAG00000033511	OSTF1 (ENSCCAG00000026237) #27	NMRK1 (ENSCCAG00000012965) #28	CARNMT1 (ENSCCAG00000034529) #29	ENSCCAG00000015037	C9orf40 (ENSCCAG00000033663) #30	TRPM6 (ENSCCAG00000036659) #31	RORB (ENSCCAG00000027613) #32
Bolivian squirrel monkey	MODERN SPECIES	43	ENSSBOG00000029007	AIF1L (ENSSBOG00000026358)	LAMC3 (ENSSBOG00000029307)	FIBCD1 (ENSSBOG00000031329)	ABL1 (ENSSBOG00000029514)	EXOSC2 (ENSSBOG00000022712)	ENSSBOG00000029129	FUBP3 (ENSSBOG00000021755)	ENSSBOG00000021830	HMCN2 (ENSSBOG00000033989)	ENSSBOG00000026941	ENSSBOG00000020286	PSAT1 (ENSSBOG00000035275) #19	CEP78 (ENSSBOG00000025965) #20	GNAQ (ENSSBOG00000021413) #21	GNA14 (ENSSBOG00000027170) #22	VPS13A (ENSSBOG00000020923) #23	FOXB2 (ENSSBOG00000024647)	PRUNE2 (ENSSBOG00000023559)	GCNT1 (ENSSBOG00000018905) #24	ENSSBOG00000032040	ENSSBOG00000019534 #25	PCSK5 (ENSSBOG00000009773) #26	ENSSBOG00000009396	OSTF1 (ENSSBOG00000027446) #27	NMRK1 (ENSSBOG00000032396) #28	CARNMT1 (ENSSBOG00000029802) #29	TRPM6 (ENSSBOG00000030648) #31	RORB (ENSSBOG00000024252) #32	ENC1 (ENSSBOG00000018607)	ENSSBOG00000011145
Marmoset	MODERN SPECIES		KCNV2 (ENSCJAG00000042809)	VLDLR (ENSCJAG00000010772)	ENSCJAG00000042690	SMARCA2 (ENSCJAG00000010710)	DMRT2 (ENSCJAG00000010690)	DMRT3 (ENSCJAG00000063670)	ENSCJAG00000084547	KANK1 (ENSCJAG00000010595)	DOCK8 (ENSCJAG00000010485)	ENSCJAG00000078334	ENSCJAG00000054365 ##16	ENSCJAG00000010423	ENSCJAG00000040149	ENSCJAG00000073324 ##16	ENSCJAG00000085396	ENSCJAG00000074827 #22	ENSCJAG00000003147 #23	ENSCJAG00000032275	ENSCJAG00000054232 ##16	ENSCJAG00000084872	ENSCJAG00000072998	ENSCJAG00000003266	GNAQ (ENSCJAG00000003268) #21	ENSCJAG00000042365	CEP78 (ENSCJAG00000003289) #20	PSAT1 (ENSCJAG00000003319) #19	ENSCJAG00000052461	ENSCJAG00000084238	TLE4 (ENSCJAG00000003336) #18	ENSCJAG00000083224	ENSCJAG00000072614
Tarsier	MODERN SPECIES	3973												PSAT1 (ENSTSYG00000000093) #19	CEP78 (ENSTSYG00000014143) #20	GNAQ (ENSTSYG00000009194) #21	ENSTSYG00000028216	GNA14 (ENSTSYG00000000455) #22	ENSTSYG00000029340
Strepsirrhini	ANCESTRAL SPECIES	8	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a.d #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT00950000183037.A.b #34
Lemuriformes	ANCESTRAL SPECIES	66	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a.d #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33
Lemuriformes_a	ANCESTRAL SPECIES	250													ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24
Coquerels sifaka	MODERN SPECIES	475											ENSPCOG00000023650	ENSPCOG00000014693	PSAT1 (ENSPCOG00000016182) #19	CEP78 (ENSPCOG00000009887) #20	GNAQ (ENSPCOG00000024722) #21	GNA14 (ENSPCOG00000024302) #22	VPS13A (ENSPCOG00000023693) #23	FOXB2 (ENSPCOG00000025595)	PRUNE2 (ENSPCOG00000026186)	RFK (ENSPCOG00000025134) #25	ENSPCOG00000016767	PCSK5 (ENSPCOG00000016483) #26
Greater bamboo lemur	MODERN SPECIES	411															GNAQ (ENSPSMG00000017767) #21	GNA14 (ENSPSMG00000017748) #22	VPS13A (ENSPSMG00000017501) #23	FOXB2 (ENSPSMG00000017149)	PRUNE2 (ENSPSMG00000017116)	GCNT1 (ENSPSMG00000017048) #24
Mouse lemur	MODERN SPECIES	1	SLC28A3 (ENSMICG00000009916)	RMI1 (ENSMICG00000031486) #7	HNRNPK (ENSMICG00000015780) ##8	C9orf64 (ENSMICG00000015776) #9	KIF27 (ENSMICG00000026425) #10	GKAP1 (ENSMICG00000004713) #11	UBQLN1 (ENSMICG00000004708) #12	IDNK (ENSMICG00000004704) #13	FRMD3 (ENSMICG00000000303) #14	RASEF (ENSMICG00000011836) #15	TLE1 (ENSMICG00000012918) #17	TLE4 (ENSMICG00000010164) #18	PSAT1 (ENSMICG00000003010) #19	ENSMICG00000003003 #20	GNAQ (ENSMICG00000044048) #21	GNA14 (ENSMICG00000003970) #22	VPS13A (ENSMICG00000003937) #23	FOXB2 (ENSMICG00000032613)	PRUNE2 (ENSMICG00000042329)	ENSMICG00000035231 #24	ENSMICG00000047245	ENSMICG00000014909	FBP2 (ENSMICG00000001148)	PTPRD (ENSMICG00000006128)	ENSMICG00000031481	ENSMICG00000035188	DMAC1 (ENSMICG00000035725)	KDM4C (ENSMICG00000010464)	GLDC (ENSMICG00000000602)	UHRF2 (ENSMICG00000036338)	TPD52L3 (ENSMICG00000000600)
Bushbaby	MODERN SPECIES	121	ENSOGAG00000030912	ENSOGAG00000027042	ENSOGAG00000026418 ##16	TLE1 (ENSOGAG00000012917) #17	ENSOGAG00000024643	ENSOGAG00000027188	TLE4 (ENSOGAG00000009689) #18	ENSOGAG00000009484	ENSOGAG00000032944	PSAT1 (ENSOGAG00000003045) #19	CEP78 (ENSOGAG00000003043) #20	ENSOGAG00000025336	GNAQ (ENSOGAG00000009233) #21	ENSOGAG00000025570	ENSOGAG00000034066	GNA14 (ENSOGAG00000009228) #22	VPS13A (ENSOGAG00000009206) #23	FOXB2 (ENSOGAG00000031210)	ENSOGAG00000028224	PRUNE2 (ENSOGAG00000029865)	GCNT1 (ENSOGAG00000002901) #24	RFK (ENSOGAG00000013120) #25	PCSK5 (ENSOGAG00000013106) #26	OSTF1 (ENSOGAG00000002603) #27	NMRK1 (ENSOGAG00000002602) #28	CARNMT1 (ENSOGAG00000002600) #29	C9orf40 (ENSOGAG00000029257) #30	TRPM6 (ENSOGAG00000008591) #31	RORB (ENSOGAG00000001523) #32	ENSOGAG00000009311 #33	ENSOGAG00000028240 #35
Euarchontoglires_A	ANCESTRAL SPECIES	10	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Tree shrew	MODERN SPECIES	5706															ENSTBEG00000009447	GNA14 (ENSTBEG00000009389) #22	VPS13A (ENSTBEG00000006487) #23
Glires	ANCESTRAL SPECIES	9	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Lagomorpha	ANCESTRAL SPECIES	77													ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Rabbit	MODERN SPECIES		ENSOCUG00000027755 #16	ENSOCUG00000034184	ENSOCUG00000023951	ENSOCUG00000032438	ENSOCUG00000027027	ENSOCUG00000035151 #17	ENSOCUG00000000531 #17	ENSOCUG00000022657	ENSOCUG00000032761	TLE4 (ENSOCUG00000011891) #18	ENSOCUG00000024344	ENSOCUG00000026996	PSAT1 (ENSOCUG00000007765) #19	CEP78 (ENSOCUG00000007758) #20	GNAQ (ENSOCUG00000016559) #21	GNA14 (ENSOCUG00000005507) #22	VPS13A (ENSOCUG00000001328) #23	FOXB2 (ENSOCUG00000002111)	PRUNE2 (ENSOCUG00000008553)	GCNT1 (ENSOCUG00000007916) #24	ENSOCUG00000001622 #25	PCSK5 (ENSOCUG00000001616) #26	ENSOCUG00000028054	ENSOCUG00000017040 #27	ENSOCUG00000017026 #28	CARNMT1 (ENSOCUG00000017017) #29	C9orf40 (ENSOCUG00000006076) #30	TRPM6 (ENSOCUG00000003734) #31	RORB (ENSOCUG00000003732) #32	ENSOCUG00000026323	ENSOCUG00000024168
Pika	MODERN SPECIES	4435															GNAQ (ENSOPRG00000009904) #21	GNA14 (ENSOPRG00000009880) #22	VPS13A (ENSOPRG00000009741) #23
Rodentia	ANCESTRAL SPECIES	9	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Rodentia_A	ANCESTRAL SPECIES	11	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Hystricomorpha	ANCESTRAL SPECIES	46		ENSGT00940000154461.`c	ENSGT00940000154294.k.a	ENSGT01030000234669.A	ENSGT01090000260018.D.d.a	ENSGT01090000260018.A.a.b	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Hystricomorpha_a	ANCESTRAL SPECIES	53	ENSGT00940000154461.`c	ENSGT00940000154294.k.a	ENSGT00940000154294.k.b	ENSGT00940000154294.l	ENSGT01030000234669.A	ENSGT01090000260018.A.a.b	ENSGT00940000162750	ENSGT00530000063632.B	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Guinea pig	MODERN SPECIES	21				RACK1 (ENSCPOG00000008724)	TRIM41 (ENSCPOG00000022446)	TRIM7 (ENSCPOG00000034919)	ZFP62 (ENSCPOG00000037011)	MGAT1 (ENSCPOG00000032870)	RASEF (ENSCPOG00000005004) #15	TLE1 (ENSCPOG00000013582) #17	TLE4 (ENSCPOG00000010034) #18	PSAT1 (ENSCPOG00000030281) #19	CEP78 (ENSCPOG00000009445) #20	GNAQ (ENSCPOG00000034812) #21	ENSCPOG00000019876	GNA14 (ENSCPOG00000005387) #22	VPS13A (ENSCPOG00000006841) #23	PRUNE2 (ENSCPOG00000040525)	GCNT1 (ENSCPOG00000013671) #24	RFK (ENSCPOG00000038626) #25	PCSK5 (ENSCPOG00000002680) #26	OSTF1 (ENSCPOG00000007226) #27	NMRK1 (ENSCPOG00000039820) #28	CARNMT1 (ENSCPOG00000034337) #29	TRPM6 (ENSCPOG00000011221) #31	RORB (ENSCPOG00000010612) #32	ANXA1 (ENSCPOG00000014597) #33	ENSCPOG00000037891 #35	ENSCPOG00000027235 #35	ENSCPOG00000039887 #35	TMC1 (ENSCPOG00000002837) #36
Hystricomorpha_b	ANCESTRAL SPECIES	114											ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Long-tailed chinchilla	MODERN SPECIES	219											PSAT1 (ENSCLAG00000004235) #19	CEP78 (ENSCLAG00000002278) #20	ENSCLAG00000001201	ENSCLAG00000001211	ENSCLAG00000001286	GNA14 (ENSCLAG00000001333) #22	VPS13A (ENSCLAG00000001458) #23	FOXB2 (ENSCLAG00000002151)	ENSCLAG00000002177	ENSCLAG00000002261	GCNT1 (ENSCLAG00000002318) #24	RFK (ENSCLAG00000001176) #25	PCSK5 (ENSCLAG00000001262) #26	OSTF1 (ENSCLAG00000001314) #27	NMRK1 (ENSCLAG00000001323) #28	ENSCLAG00000001350 #29	TRPM6 (ENSCLAG00000001382) #31	RORB (ENSCLAG00000001463) #32	ENSCLAG00000001590 #33	ENSCLAG00000001755 #35	ENSCLAG00000001772 #35
Degu	MODERN SPECIES	136		TLE1 (ENSODEG00000003417) #17	ENSODEG00000018969	ENSODEG00000018925	ENSODEG00000003548	ENSODEG00000003198	TLE4 (ENSODEG00000003247) #18	ENSODEG00000018932	ENSODEG00000003341	ENSODEG00000018927	ENSODEG00000003369 #19	ENSODEG00000003423	CEP78 (ENSODEG00000003443) #20	GNAQ (ENSODEG00000003488) #21	ENSODEG00000003499	GNA14 (ENSODEG00000003528) #22	ENSODEG00000003546	VPS13A (ENSODEG00000003608) #23	FOXB2 (ENSODEG00000018997)	ENSODEG00000019009	ENSODEG00000018936	ENSODEG00000003738	ENSODEG00000003761	GCNT1 (ENSODEG00000018998) #24	RFK (ENSODEG00000003081) #25	ENSODEG00000003128 #26	ENSODEG00000003169	OSTF1 (ENSODEG00000003195) #27	NMRK1 (ENSODEG00000003218) #28	CARNMT1 (ENSODEG00000003242) #29	TRPM6 (ENSODEG00000003284) #31
Naked mole-rat female	MODERN SPECIES	3	ENSHGLG00000048766	ENSHGLG00000047277 ##16	ENSHGLG00000048302	ENSHGLG00000000915	ENSHGLG00000001072 #17	ENSHGLG00000019837	TLE4 (ENSHGLG00000002102) #18	ENSHGLG00000044467	ENSHGLG00000000755 #19	ENSHGLG00000002547 #20	ENSHGLG00000038481	ENSHGLG00000007997	ENSHGLG00000002513	ENSHGLG00000036185	ENSHGLG00000002009	ENSHGLG00000001656 #22	VPS13A (ENSHGLG00000000572) #23	FOXB2 (ENSHGLG00000001812)	ENSHGLG00000036846	ENSHGLG00000040487	GCNT1 (ENSHGLG00000000522) #24	ENSHGLG00000000486 #25	ENSHGLG00000000259 #26	ENSHGLG00000050620	ENSHGLG00000042174	ENSHGLG00000049071 #27	ENSHGLG00000044788 #28	ENSHGLG00000002210	CARNMT1 (ENSHGLG00000000378) #29	ENSHGLG00000033948	ENSHGLG00000050025
Sciuridae	ANCESTRAL SPECIES	6	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374.u #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Marmotini	ANCESTRAL SPECIES	1										ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Marmotini_b	ANCESTRAL SPECIES	88										ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Squirrel	MODERN SPECIES	103															GNAQ (ENSSTOG00000024755) #21	GNA14 (ENSSTOG00000008680) #22	VPS13A (ENSSTOG00000008587) #23	ENSSTOG00000033146	ENSSTOG00000026412	PRUNE2 (ENSSTOG00000023589)	GCNT1 (ENSSTOG00000012068) #24	ENSSTOG00000027323	RFK (ENSSTOG00000012064) #25	ENSSTOG00000020987	PCSK5 (ENSSTOG00000012040) #26	OSTF1 (ENSSTOG00000023378) #27	NMRK1 (ENSSTOG00000000389) #28	CARNMT1 (ENSSTOG00000000385) #29	TRPM6 (ENSSTOG00000013271) #31	RORB (ENSSTOG00000013264) #32	ANXA1 (ENSSTOG00000023530) #33
Arctic ground squirrel	MODERN SPECIES	131												TLE4 (ENSUPAG00010021868) #18	PSAT1 (ENSUPAG00010021862) #19	CEP78 (ENSUPAG00010021857) #20	ENSUPAG00010021855	GNA14 (ENSUPAG00010021852) #22	VPS13A (ENSUPAG00010021846) #23	FOXB2 (ENSUPAG00010021845)	ENSUPAG00010021844	PRUNE2 (ENSUPAG00010021836)	GCNT1 (ENSUPAG00010021834) #24	ENSUPAG00010021831	RFK (ENSUPAG00010021827) #25	ENSUPAG00010021821 #26
Alpin marmot	MODERN SPECIES	32									RASEF (ENSMMMG00000018363) #15	TLE1 (ENSMMMG00000012607) #17	ENSMMMG00000012571	TLE4 (ENSMMMG00000012524) #18	PSAT1 (ENSMMMG00000012517) #19	CEP78 (ENSMMMG00000012498) #20	GNAQ (ENSMMMG00000012272) #21	GNA14 (ENSMMMG00000012248) #22	VPS13A (ENSMMMG00000012153) #23	ENSMMMG00000012137	ENSMMMG00000012128	PRUNE2 (ENSMMMG00000012039)	GCNT1 (ENSMMMG00000012027) #24	RFK (ENSMMMG00000012015) #25	ENSMMMG00000011961 #26	ENSMMMG00000011953	ENSMMMG00000011944	OSTF1 (ENSMMMG00000011932) #27	NMRK1 (ENSMMMG00000011918) #28	ENSMMMG00000011915	ENSMMMG00000011905 #30	TRPM6 (ENSMMMG00000011876) #31	RORB (ENSMMMG00000011844) #32
Eurasian red squirrel	MODERN SPECIES	6	ENSSVLG00005025192	GKAP1 (ENSSVLG00005025203) #11	ENSSVLG00005025241	UBQLN1 (ENSSVLG00005025254) #12	IDNK (ENSSVLG00005025283) #13	ENSSVLG00005025340	FRMD3 (ENSSVLG00005025365) #14	RASEF (ENSSVLG00005025415) #15	TLE1 (ENSSVLG00005025442) #17	ENSSVLG00005025469	TLE4 (ENSSVLG00005025580) #18	ENSSVLG00005025732	PSAT1 (ENSSVLG00005025737) #19	ENSSVLG00005025778 #20	ENSSVLG00005025826	GNA14 (ENSSVLG00005025833) #22	VPS13A (ENSSVLG00005025879) #23	ENSSVLG00005025921	FOXB2 (ENSSVLG00005014521)	PRUNE2 (ENSSVLG00005014607)	ENSSVLG00005014936	ENSSVLG00005015000	GCNT1 (ENSSVLG00005015046) #24	ENSSVLG00005015067 #25	PCSK5 (ENSSVLG00005015142) #26	ENSSVLG00005015236	ENSSVLG00005015253	OSTF1 (ENSSVLG00005015295) #27	NMRK1 (ENSSVLG00005015348) #28	CARNMT1 (ENSSVLG00005015445) #29	C9orf40 (ENSSVLG00005015497) #30
Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000158006	ENSGT00950000182916.a.b.a.b	ENSGT00940000155586.B	ENSGT00530000063790.b	ENSGT00940000155804	ENSGT00940000153617.D	ENSGT00390000003343	ENSGT00940000154930	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Muroidea	ANCESTRAL SPECIES	1	ENSGT00950000182916.a.b.a.b	ENSGT00940000155586.B	ENSGT00530000063790.b	ENSGT00940000155804	ENSGT00940000153617.D	ENSGT00390000003343	ENSGT00940000154930	ENSGT00940000158577 #14	ENSGT00520000057958	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Muroidea_A	ANCESTRAL SPECIES		ENSGT01060000248581.A.a.a.a.e.b	ENSGT01100000263561.B	ENSGT01060000248581.A.a.a.a.e.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35
Cricetidae	ANCESTRAL SPECIES	1	ENSGT01100000263561.B	ENSGT01060000248581.A.a.a.a.e.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b.f #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT01060000248581.A.a.b	ENSGT01100000263561.B	ENSGT01060000248581.A.a.a.a.e.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b.f #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35
Northern American deer mouse	MODERN SPECIES		Or10q1 (ENSPEMG00000026262)	Or10q12 (ENSPEMG00000026052)	Or1s2 (ENSPEMG00000029030)	Or9q2 (ENSPEMG00000028521)	ENSPEMG00000027169	Or9i14 (ENSPEMG00000028210)	Or9q1 (ENSPEMG00000030928)	ENSPEMG00000005907	ENSPEMG00000029012	Tle4 (ENSPEMG00000006537) #18	ENSPEMG00000025664	Psat1 (ENSPEMG00000022279) #19	Cep78 (ENSPEMG00000013176) #20	ENSPEMG00000029390	ENSPEMG00000026093 #21	Gna14 (ENSPEMG00000022983) #22	Vps13a (ENSPEMG00000022969) #23	ENSPEMG00000001408	Prune2 (ENSPEMG00000009652)	ENSPEMG00000025542	Gcnt1 (ENSPEMG00000024295) #24	Rfk (ENSPEMG00000031112) #25	Pcsk5 (ENSPEMG00000002720) #26	ENSPEMG00000003630	Ostf1 (ENSPEMG00000020370) #27	Nmrk1 (ENSPEMG00000013725) #28	Carnmt1 (ENSPEMG00000010072) #29	D030056L22Rik (ENSPEMG00000025661) #30	Trpm6 (ENSPEMG00000011848) #31	Rorb (ENSPEMG00000000824) #32	Anxa1 (ENSPEMG00000014478) #33
Prairie vole	MODERN SPECIES	16	Gm4952 (ENSMOCG00000015076)	Glyat (ENSMOCG00000016115)	Keg1 (ENSMOCG00000012983)	Cntf (ENSMOCG00000016049)	Zfp91 (ENSMOCG00000018468)	Lpxn (ENSMOCG00000019266)	Or5b21 (ENSMOCG00000002067)	ENSMOCG00000009033	ENSMOCG00000017684	Or9q1 (ENSMOCG00000009793)	Tle4 (ENSMOCG00000011846) #18	ENSMOCG00000017959	ENSMOCG00000021736 #19	Cep78 (ENSMOCG00000020072) #20	ENSMOCG00000012700	Gna14 (ENSMOCG00000012393) #22	ENSMOCG00000013981	Vps13a (ENSMOCG00000019974) #23	ENSMOCG00000019450	Foxb2 (ENSMOCG00000001949)	ENSMOCG00000009883	ENSMOCG00000019381	Gcnt1 (ENSMOCG00000013528) #24	Rfk (ENSMOCG00000019217) #25	ENSMOCG00000020199 #26	Ostf1 (ENSMOCG00000021405) #27	Nmrk1 (ENSMOCG00000022247) #28	Carnmt1 (ENSMOCG00000005517) #29	D030056L22Rik (ENSMOCG00000012610) #30	Trpm6 (ENSMOCG00000012817) #31	Rorb (ENSMOCG00000020519) #32
Cricetinae	ANCESTRAL SPECIES	2	ENSGT01060000248581.A.a.a.a.e.b	ENSGT01060000248581.A.a.b	ENSGT01060000248581.A.a.a.a.e.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b.f #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35
Chinese hamster chok1gshd	MODERN SPECIES	401	ENSCGRG00001011673	ENSCGRG00001010614	Or10q1 (ENSCGRG00001012195)	Or10q12 (ENSCGRG00001011414)	Or1s2 (ENSCGRG00001011281)	Or9q2 (ENSCGRG00001012139)	ENSCGRG00001021275	Or9i14 (ENSCGRG00001021924)	Or9q1 (ENSCGRG00001011797)	ENSCGRG00001012925	ENSCGRG00001012493	Tle4 (ENSCGRG00001023373) #18	Psat1 (ENSCGRG00001010797) #19	Cep78 (ENSCGRG00001023702) #20	Gnaq (ENSCGRG00001001493)	Gna14 (ENSCGRG00001002239) #22	Vps13a (ENSCGRG00001016073) #23	Foxb2 (ENSCGRG00001010014)	Prune2 (ENSCGRG00001006057)	Gcnt1 (ENSCGRG00001007418) #24	Rfk (ENSCGRG00001013646) #25	Pcsk5 (ENSCGRG00001018685) #26	ENSCGRG00001022403	Ostf1 (ENSCGRG00001011060) #27	ENSCGRG00001005253	ENSCGRG00001008426 #28	Carnmt1 (ENSCGRG00001013615) #29	D030056L22Rik (ENSCGRG00001015201) #30	Trpm6 (ENSCGRG00001018511) #31	Rorb (ENSCGRG00001012566) #32	Anxa1 (ENSCGRG00001020144) #33
Golden Hamster	MODERN SPECIES	617	Cntf (ENSMAUG00000011143)	Zfp91 (ENSMAUG00000011095)	Lpxn (ENSMAUG00000010591)	Or5b21 (ENSMAUG00000010581)	Or5b24 (ENSMAUG00000010357)	ENSMAUG00000010348	Or5b113 (ENSMAUG00000010634)	ENSMAUG00000011427	ENSMAUG00000010391	Or9q1 (ENSMAUG00000001875)	Tle4 (ENSMAUG00000010722) #18	ENSMAUG00000010124	ENSMAUG00000010617 #19	Cep78 (ENSMAUG00000010295) #20	Gnaq (ENSMAUG00000010263)	Gna14 (ENSMAUG00000010242) #22	ENSMAUG00000009666	Vps13a (ENSMAUG00000011043) #23	Foxb2 (ENSMAUG00000002346)	ENSMAUG00000010050	ENSMAUG00000011637	Gcnt1 (ENSMAUG00000002095) #24	ENSMAUG00000011219 #26	Ostf1 (ENSMAUG00000011202) #27	Nmrk1 (ENSMAUG00000009949) #28	Carnmt1 (ENSMAUG00000009492) #29	D030056L22Rik (ENSMAUG00000009324) #30	Trpm6 (ENSMAUG00000011731) #31	Rorb (ENSMAUG00000010447) #32	Anxa1 (ENSMAUG00000009898) #33	Aldh1a1 (ENSMAUG00000010223) #35
Murinae	ANCESTRAL SPECIES		ENSGT01060000248581.A.a.b	ENSGT01060000248581.A.a.a.a.e.b	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35	ENSGT00940000154609.ab #35
Mus	ANCESTRAL SPECIES		ENSGT01060000248581.A.a.b	ENSGT01060000248581.A.a.a.a.e.b	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b.a	ENSGT01100000263494.a.b.a.a.a.a.o.a	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35	ENSGT00940000154609.ab #35
Mus_A	ANCESTRAL SPECIES	16	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b.a	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.a	ENSGT01100000263494.a.b.a.a.b.b	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.b	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35	ENSGT00940000154609.ab #35
Mus_B	ANCESTRAL SPECIES	16	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b.a	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.a	ENSGT01100000263494.a.b.a.a.b.b	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.b	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35	ENSGT00940000154609.ab #35
Mouse	MODERN SPECIES	10	Or10w3 (ENSMUSG00000109520)	Or10q1 (ENSMUSG00000050865)	Or10q12 (ENSMUSG00000047207)	Or1s2 (ENSMUSG00000048356)	Or9q2 (ENSMUSG00000044040)	Or9i14 (ENSMUSG00000045395)	Or9q1 (ENSMUSG00000054526)	Or9i2 (ENSMUSG00000057270)	Or9i1 (ENSMUSG00000056858)	Or9i16 (ENSMUSG00000059105)	Or9i1b (ENSMUSG00000062314)	Tle4 (ENSMUSG00000024642) #18	Psat1 (ENSMUSG00000024640) #19	Cep78 (ENSMUSG00000041491) #20	Gnaq (ENSMUSG00000024639)	Gna14 (ENSMUSG00000024697) #22	Vps13a (ENSMUSG00000046230) #23	Foxb2 (ENSMUSG00000056829)	Prune2 (ENSMUSG00000039126)	Gcnt1 (ENSMUSG00000038843) #24	Rfk (ENSMUSG00000024712) #25	Pcsk5 (ENSMUSG00000024713) #26	Ostf1 (ENSMUSG00000024725) #27	Nmrk1 (ENSMUSG00000037847) #28	Carnmt1 (ENSMUSG00000024726) #29	D030056L22Rik (ENSMUSG00000047044) #30	Trpm6 (ENSMUSG00000024727) #31	Rorb (ENSMUSG00000036192) #32	Anxa1 (ENSMUSG00000024659) #33	Aldh1a1 (ENSMUSG00000053279) #35	Aldh1a7 (ENSMUSG00000024747) #35
Mus_C	ANCESTRAL SPECIES	24	ENSGT01100000263561.B.g.a	ENSGT01060000248581.A.a.a.a.f	ENSGT00940000162899	ENSGT01100000263494.a.b.a.a.a.b.c	ENSGT01100000263494.a.b.a.a.a.a.o.b	ENSGT01100000263494.a.b.a.a.a.a.p	ENSGT01100000263494.a.b.a.a.a.b.d	ENSGT01100000263494.a.b.a.a.b.a	ENSGT01100000263494.a.b.a.a.a.a.o.a.a.a	ENSGT01100000263494.a.b.a.a.b.b	ENSGT01100000263494.a.b.a.a.a.a.o.a.b	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.`b #35	ENSGT00940000154609.ab #35
Steppe mouse	MODERN SPECIES	3183										Tle4 (ENSMSIG00000017471) #18	ENSMSIG00000017538	Psat1 (ENSMSIG00000017588) #19	Cep78 (ENSMSIG00000017625) #20	Gnaq (ENSMSIG00000017652)	ENSMSIG00000017672	Gna14 (ENSMSIG00000017683) #22	Vps13a (ENSMSIG00000017713) #23
spretus	MODERN SPECIES	10	Or10q1b (MGP_SPRETEiJ_G0023700)	MGP_SPRETEiJ_G0023701	Or10q12 (MGP_SPRETEiJ_G0023702)	Or1s2 (MGP_SPRETEiJ_G0023703)	Or9q2 (MGP_SPRETEiJ_G0023704)	Or9i14 (MGP_SPRETEiJ_G0023705)	Or9q1 (MGP_SPRETEiJ_G0023706)	MGP_SPRETEiJ_G0023707	MGP_SPRETEiJ_G0023708	MGP_SPRETEiJ_G0023709	MGP_SPRETEiJ_G0023710	Tle4 (MGP_SPRETEiJ_G0023711) #18	Psat1 (MGP_SPRETEiJ_G0023712) #19	Cep78 (MGP_SPRETEiJ_G0023713) #20	Gnaq (MGP_SPRETEiJ_G0023714)	Gna14 (MGP_SPRETEiJ_G0023715) #22	Vps13a (MGP_SPRETEiJ_G0023716) #23	Foxb2 (MGP_SPRETEiJ_G0023717)	Prune2 (MGP_SPRETEiJ_G0023718)	Gcnt1 (MGP_SPRETEiJ_G0023719) #24	Rfk (MGP_SPRETEiJ_G0023720) #25	MGP_SPRETEiJ_G0023721 #26	Ostf1 (MGP_SPRETEiJ_G0023722) #27	Nmrk1 (MGP_SPRETEiJ_G0023723) #28	MGP_SPRETEiJ_G0023724 #29	D030056L22Rik (MGP_SPRETEiJ_G0023725) #30	Trpm6 (MGP_SPRETEiJ_G0023726) #31	Rorb (MGP_SPRETEiJ_G0023727) #32	Anxa1 (MGP_SPRETEiJ_G0023728) #33	MGP_SPRETEiJ_G0023729 #35	MGP_SPRETEiJ_G0023730 #35
Ryukyu mouse	MODERN SPECIES	10	Or10q1b (MGP_CAROLIEiJ_G0022781)	Or10q1 (MGP_CAROLIEiJ_G0022782)	MGP_CAROLIEiJ_G0022783	Or1s2 (MGP_CAROLIEiJ_G0022784)	Or9q2 (MGP_CAROLIEiJ_G0022785)	Or9i14 (MGP_CAROLIEiJ_G0022786)	Or9q1 (MGP_CAROLIEiJ_G0022787)	Or9i2 (MGP_CAROLIEiJ_G0022788)	Or9i1 (MGP_CAROLIEiJ_G0022789)	Or9i16 (MGP_CAROLIEiJ_G0022790)	Or9i1b (MGP_CAROLIEiJ_G0022791)	Tle4 (MGP_CAROLIEiJ_G0022792) #18	Psat1 (MGP_CAROLIEiJ_G0022793) #19	Cep78 (MGP_CAROLIEiJ_G0022794) #20	Gnaq (MGP_CAROLIEiJ_G0022795)	Gna14 (MGP_CAROLIEiJ_G0022796) #22	Vps13a (MGP_CAROLIEiJ_G0022797) #23	Foxb2 (MGP_CAROLIEiJ_G0022798)	Prune2 (MGP_CAROLIEiJ_G0022799)	Gcnt1 (MGP_CAROLIEiJ_G0022800) #24	Rfk (MGP_CAROLIEiJ_G0022801) #25	MGP_CAROLIEiJ_G0022802 #26	Ostf1 (MGP_CAROLIEiJ_G0022803) #27	Nmrk1 (MGP_CAROLIEiJ_G0022804) #28	Carnmt1 (MGP_CAROLIEiJ_G0022805) #29	D030056L22Rik (MGP_CAROLIEiJ_G0022806) #30	Trpm6 (MGP_CAROLIEiJ_G0022807) #31	Rorb (MGP_CAROLIEiJ_G0022808) #32	Anxa1 (MGP_CAROLIEiJ_G0022809) #33	Aldh1a1 (MGP_CAROLIEiJ_G0022810) #35	Aldh1a7 (MGP_CAROLIEiJ_G0022811) #35
Shrew mouse	MODERN SPECIES		Or5b124 (MGP_PahariEiJ_G0014276)	Or10w1 (MGP_PahariEiJ_G0014277)	Or10q1b (MGP_PahariEiJ_G0014278)	Or10q1 (MGP_PahariEiJ_G0014279)	MGP_PahariEiJ_G0014280	Or1s2 (MGP_PahariEiJ_G0014281)	Or9q2 (MGP_PahariEiJ_G0014282)	MGP_PahariEiJ_G0014283	Or9q1 (MGP_PahariEiJ_G0014284)	Or9i2 (MGP_PahariEiJ_G0014285)	Or9i16 (MGP_PahariEiJ_G0014286)	Tle4 (MGP_PahariEiJ_G0014287) #18	Psat1 (MGP_PahariEiJ_G0014288) #19	Cep78 (MGP_PahariEiJ_G0014289) #20	Gnaq (MGP_PahariEiJ_G0014290)	Gna14 (MGP_PahariEiJ_G0014291) #22	Vps13a (MGP_PahariEiJ_G0014292) #23	Foxb2 (MGP_PahariEiJ_G0014293)	Prune2 (MGP_PahariEiJ_G0014294)	Gcnt1 (MGP_PahariEiJ_G0014295) #24	MGP_PahariEiJ_G0014296 #25	MGP_PahariEiJ_G0014297 #26	Ostf1 (MGP_PahariEiJ_G0014298) #27	Nmrk1 (MGP_PahariEiJ_G0014299) #28	D030056L22Rik (MGP_PahariEiJ_G0014300) #30	Trpm6 (MGP_PahariEiJ_G0014301) #31	Rorb (MGP_PahariEiJ_G0014302) #32	Anxa1 (MGP_PahariEiJ_G0014303) #33	Aldh1a1 (MGP_PahariEiJ_G0014304) #35	Aldh1a7 (MGP_PahariEiJ_G0014305) #35	Tmc1 (MGP_PahariEiJ_G0014306) #36
Rat	MODERN SPECIES		Or10w3 (ENSRNOG00000067633)	Or10q1 (ENSRNOG00000068256)	Or10q12 (ENSRNOG00000032600)	Or1s2 (ENSRNOG00000013192)	Or9q2 (ENSRNOG00000013198)	Or9i13 (ENSRNOG00000031224)	Or9q1 (ENSRNOG00000023530)	Or9i16 (ENSRNOG00000064819)	Or9i14 (ENSRNOG00000013208)	Or9i2 (ENSRNOG00000063548)	Or9i1b (ENSRNOG00000032117)	Tle4 (ENSRNOG00000013239) #18	Psat1 (ENSRNOG00000013971) #19	Cep78 (ENSRNOG00000014041) #20	Gnaq (ENSRNOG00000014183)	Gna14 (ENSRNOG00000014840) #22	Vps13a (ENSRNOG00000025539) #23	Foxb2 (ENSRNOG00000032137)	Prune2 (ENSRNOG00000015088)	Gcnt1 (ENSRNOG00000062686) #24	LOC120099997 (ENSRNOG00000022308)	Rfk (ENSRNOG00000022273) #25	Pcsk5 (ENSRNOG00000012036) #26	Ostf1 (ENSRNOG00000012156) #27	Nmrk1 (ENSRNOG00000012665) #28	Carnmt1 (ENSRNOG00000012872) #29	C1h9orf40 (ENSRNOG00000025644) #30	Trpm6 (ENSRNOG00000013053) #31	Rorb (ENSRNOG00000013413) #32	LOC108349792 (ENSRNOG00000029732)	ENSRNOG00000063861
Upper Galilee mountains blind mole rat	MODERN SPECIES	843															Gnaq (ENSNGAG00000021391)	Gna14 (ENSNGAG00000022142) #22	ENSNGAG00000000620	Vps13a (ENSNGAG00000018000) #23	Foxb2 (ENSNGAG00000008321)	ENSNGAG00000022504	ENSNGAG00000023165	ENSNGAG00000005506
Lesser Egyptian jerboa	MODERN SPECIES	50	ENSJJAG00000015577	ENSJJAG00000015492	Frmd3 (ENSJJAG00000019673) #14	Rasef (ENSJJAG00000023215) #15	ENSJJAG00000006657	ENSJJAG00000018428	ENSJJAG00000004662	Tle1 (ENSJJAG00000017288) #17	Tle4 (ENSJJAG00000014624) #18	ENSJJAG00000008651	ENSJJAG00000007961	Psat1 (ENSJJAG00000009742) #19	Cep78 (ENSJJAG00000010603) #20	Cyp2c70 (ENSJJAG00000004077)	ENSJJAG00000014142 #21	Gna14 (ENSJJAG00000021762) #22	ENSJJAG00000022956	Vps13a (ENSJJAG00000020332) #23	Foxb2 (ENSJJAG00000010748)	ENSJJAG00000000298	ENSJJAG00000011068	Gcnt1 (ENSJJAG00000007751) #24	ENSJJAG00000023775 #25	ENSJJAG00000017893 #26	ENSJJAG00000017021	ENSJJAG00000007517 #27	Nmrk1 (ENSJJAG00000016607) #28	ENSJJAG00000018227	Carnmt1 (ENSJJAG00000013720) #29	Trpm6 (ENSJJAG00000015158) #31	Rorb (ENSJJAG00000013056) #32
Kangaroo rat	MODERN SPECIES	359							Prxl2c (ENSDORG00000001634)	Cdc14b (ENSDORG00000005998)	Rasef (ENSDORG00000015570) #15	ENSDORG00000026939 #17	ENSDORG00000025974 #17	ENSDORG00000026113 #17	Tle4 (ENSDORG00000008552) #18	Psat1 (ENSDORG00000016698) #19	ENSDORG00000013680 #21	Gna14 (ENSDORG00000028684) #22	Vps13a (ENSDORG00000014372) #23	ENSDORG00000016172	ENSDORG00000028786	Gcnt1 (ENSDORG00000024110) #24	Rfk (ENSDORG00000028987) #25	ENSDORG00000004033 #26	ENSDORG00000002933 #27	Nmrk1 (ENSDORG00000002934) #28	Carnmt1 (ENSDORG00000002935) #29	Rorb (ENSDORG00000008602) #32	Anxa1 (ENSDORG00000011861) #33	ENSDORG00000007344 #35	Tmc1 (ENSDORG00000011879) #36	Zfand5 (ENSDORG00000024820) #37	Gda (ENSDORG00000007276)
Laurasiatheria	ANCESTRAL SPECIES	9	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Eulipotyphla	ANCESTRAL SPECIES	1430																ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23
Hedgehog	MODERN SPECIES	8271																GNA14 (ENSEEUG00000004720) #22	VPS13A (ENSEEUG00000004402) #23
Common shrew	MODERN SPECIES	3881																GNA14 (ENSSARG00000011280) #22
Laurasiatheria_a	ANCESTRAL SPECIES	11	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Suina	ANCESTRAL SPECIES	23	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Chacoan peccary	MODERN SPECIES	19											TLE4 (ENSCWAG00000019130) #18	PSAT1 (ENSCWAG00000019225) #19	CEP78 (ENSCWAG00000019324) #20	GNAQ (ENSCWAG00000020026) #21	ENSCWAG00000020048	GNA14 (ENSCWAG00000020058) #22	VPS13A (ENSCWAG00000006755) #23	FOXB2 (ENSCWAG00000009905)	PRUNE2 (ENSCWAG00000009958)	GCNT1 (ENSCWAG00000010174) #24	RFK (ENSCWAG00000010183) #25	PCSK5 (ENSCWAG00000010242) #26	OSTF1 (ENSCWAG00000010320) #27	NMRK1 (ENSCWAG00000010385) #28	CARNMT1 (ENSCWAG00000010423) #29	C9orf40 (ENSCWAG00000010507) #30	TRPM6 (ENSCWAG00000010622) #31	RORB (ENSCWAG00000011984) #32	ANXA1 (ENSCWAG00000012214) #33	ALDH1A1 (ENSCWAG00000012260) #35	TMC1 (ENSCWAG00000012501) #36
Pig	MODERN SPECIES		C9orf131 (ENSSSCG00000005298)	DNAJB5 (ENSSSCG00000005297)	PHF24 (ENSSSCG00000005296)	ENSSSCG00000059160 ##16	ENSSSCG00000022044 ##16	ENSSSCG00000058846	ENSSSCG00000037497 ##16	ENSSSCG00000033805 #16	TLE1 (ENSSSCG00000005291) #17	ENSSSCG00000043640	TLE4 (ENSSSCG00000005288) #18	PSAT1 (ENSSSCG00000005287) #19	CEP78 (ENSSSCG00000005286) #20	GNAQ (ENSSSCG00000033763) #21	ENSSSCG00000050902	GNA14 (ENSSSCG00000005284) #22	VPS13A (ENSSSCG00000005282) #23	ENSSSCG00000005279	ENSSSCG00000060679	ENSSSCG00000039009	GCNT1 (ENSSSCG00000005277) #24	RFK (ENSSSCG00000037277) #25	ENSSSCG00000057774	PCSK5 (ENSSSCG00000023520) #26	ENSSSCG00000045514	OSTF1 (ENSSSCG00000005273) #27	NMRK1 (ENSSSCG00000005272) #28	CARNMT1 (ENSSSCG00000005271) #29	C9orf40 (ENSSSCG00000031382) #30	TRPM6 (ENSSSCG00000005269) #31	RORB (ENSSSCG00000005268) #32
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Camelidae	ANCESTRAL SPECIES	5	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##16	ENSGT00950000183043.b.b ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970.fb	ENSGT00940000161970.gb	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609.o #35
Arabian camel	MODERN SPECIES	30	VCP (ENSCDRG00005008294)	ENSCDRG00005008506	ENSCDRG00005008542	DNAJB5 (ENSCDRG00005008554)	PHF24 (ENSCDRG00005008694)	ENSCDRG00005008755 ##16	ENSCDRG00005008891 #16	ENSCDRG00005008937	ENSCDRG00005009023 #16	ENSCDRG00005009152	TLE1 (ENSCDRG00005009223) #17	TLE4 (ENSCDRG00005009729) #18	PSAT1 (ENSCDRG00005010295) #19	CEP78 (ENSCDRG00005010412) #20	GNAQ (ENSCDRG00005010714) #21	GNA14 (ENSCDRG00005010802) #22	VPS13A (ENSCDRG00005010963) #23	ENSCDRG00005012146	ENSCDRG00005012196	PRUNE2 (ENSCDRG00005012296)	GCNT1 (ENSCDRG00005000054) #24	ENSCDRG00005000058	RFK (ENSCDRG00005000073) #25	PCSK5 (ENSCDRG00005000104) #26	OSTF1 (ENSCDRG00005000204) #27	NMRK1 (ENSCDRG00005000237) #28	CARNMT1 (ENSCDRG00005000294) #29	C9orf40 (ENSCDRG00005000313) #30	TRPM6 (ENSCDRG00005000352) #31	RORB (ENSCDRG00005000469) #32	ANXA1 (ENSCDRG00005000515) #33
Alpaca	MODERN SPECIES	2498															GNAQ (ENSVPAG00000002660) #21	ENSVPAG00000002658 #22	VPS13A (ENSVPAG00000002653) #23	ENSVPAG00000002649	ENSVPAG00000002647	ENSVPAG00000002644	GCNT1 (ENSVPAG00000002643) #24
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Pecora	ANCESTRAL SPECIES	30	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.b ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT01100000265124	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Percora_a	ANCESTRAL SPECIES	24	ENSGT00940000154929.A	ENSGT00940000159834	ENSGT01030000234614.A	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.b ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Bovidae	ANCESTRAL SPECIES	14	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##16	ENSGT00950000183043.b.b.g.a ##16	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##16	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Bovinae	ANCESTRAL SPECIES	14	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##16	ENSGT00950000183043.b.b.g.a ##16	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00510000046986.x.b.b.c	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153786.f	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221.l #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Bos	ANCESTRAL SPECIES	10	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##16	ENSGT00950000183043.b.b.g.a ##16	ENSGT00940000156705.q.a	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00510000046986.x.b.b.c	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153786.f	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.b.a.a.b.a	ENSGT00940000157708 #32	ENSGT00960000191550	ENSGT00940000155221.l #33
Bos_a	ANCESTRAL SPECIES	30	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.b ##16	ENSGT00950000183043.b.b.g.a ##16	ENSGT00940000156705.q.a	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00510000046986.x.b.b.c	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153786.f	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.b.a.a.b.a	ENSGT00940000157708 #32	ENSGT00960000191550	ENSGT00940000155221.l #33	ENSGT00950000183037.A.b #34
Wild yak	MODERN SPECIES	527													PSAT1 (ENSBMUG00000017264) #19	CEP78 (ENSBMUG00000017026) #20	GNAQ (ENSBMUG00000016719) #21	GNA14 (ENSBMUG00000016710) #22	VPS13A (ENSBMUG00000016513) #23	ENSBMUG00000016024	ENSBMUG00000016005	ENSBMUG00000015977	ENSBMUG00000015952	GCNT1 (ENSBMUG00000015908) #24	RFK (ENSBMUG00000015895) #25	ENSBMUG00000015883	PCSK5 (ENSBMUG00000015866) #26	ENSBMUG00000015810
Domestic yak	MODERN SPECIES	26	ENSBGRG00000013622	ENSBGRG00000013635	DNAJB5 (ENSBGRG00000013654)	PHF24 (ENSBGRG00000013768)	ENSBGRG00000013818 ##16	ENSBGRG00000013886 ##16	ENSBGRG00000013935	ENSBGRG00000013989 #16	TLE1 (ENSBGRG00000014025) #17	ENSBGRG00000014478	TLE4 (ENSBGRG00000014515) #18	ENSBGRG00000015298	PSAT1 (ENSBGRG00000015370) #19	CEP78 (ENSBGRG00000015625) #20	GNAQ (ENSBGRG00000018521) #21	GNA14 (ENSBGRG00000018676) #22	ENSBGRG00000018726	VPS13A (ENSBGRG00000018767) #23	FOXB2 (ENSBGRG00000019072)	PRUNE2 (ENSBGRG00000019111)	GCNT1 (ENSBGRG00000019923) #24	RFK (ENSBGRG00000019943) #25	PCSK5 (ENSBGRG00000020040) #26	ENSBGRG00000020946	OSTF1 (ENSBGRG00000020958) #27	NMRK1 (ENSBGRG00000021061) #28	CARNMT1 (ENSBGRG00000021200) #29	ENSBGRG00000021340	ENSBGRG00000021355	ENSBGRG00000021369	TRPM6 (ENSBGRG00000021396) #31
Bos_b	ANCESTRAL SPECIES	3	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##16	ENSGT00950000183043.b.b.g.a ##16	ENSGT00940000156705.q.a	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00510000046986.x.b.b.c	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153786.f	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.a.a.a.b.a.a.b.a	ENSGT00940000157708 #32	ENSGT00960000191550	ENSGT00940000155221.l #33
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005006605	ENSBIXG00005010808	DNAJB5 (ENSBIXG00005010876)	PHF24 (ENSBIXG00005010904)	ENSBIXG00005010937 ##16	ENSBIXG00005010942 ##16	ENSBIXG00005011007 #16	TLE1 (ENSBIXG00005011126) #17	ENSBIXG00005011164	TLE4 (ENSBIXG00005011277) #18	PSAT1 (ENSBIXG00005011341) #19	ENSBIXG00005011364	CEP78 (ENSBIXG00005006208) #20	GNAQ (ENSBIXG00005011522) #21	ENSBIXG00005011557	GNA14 (ENSBIXG00005011575) #22	VPS13A (ENSBIXG00005006324) #23	FOXB2 (ENSBIXG00005011723)	PRUNE2 (ENSBIXG00005007526)	GCNT1 (ENSBIXG00005012101) #24	ENSBIXG00005012140 #25	ENSBIXG00005012159	PCSK5 (ENSBIXG00005012986) #26	OSTF1 (ENSBIXG00005013151) #27	NMRK1 (ENSBIXG00005013188) #28	CARNMT1 (ENSBIXG00005013231) #29	TRPM6 (ENSBIXG00005014056) #31	ENSBIXG00005014163	RORB (ENSBIXG00005006505) #32	ENSBIXG00005014214	ENSBIXG00005014241 #33
Cow	MODERN SPECIES	27	VCP (ENSBTAG00000015000)	C8H9orf131 (ENSBTAG00000051343)	DNAJB5 (ENSBTAG00000018318)	PHF24 (ENSBTAG00000012809)	FAM205C (ENSBTAG00000017338) ##16	ENSBTAG00000049991 ##16	ENSBTAG00000050015	ENSBTAG00000005667 #16	TLE1 (ENSBTAG00000000256) #17	ENSBTAG00000006294	TLE4 (ENSBTAG00000003532) #18	ENSBTAG00000024233	PSAT1 (ENSBTAG00000013960) #19	CEP78 (ENSBTAG00000020752) #20	GNAQ (ENSBTAG00000009789) #21	GNA14 (ENSBTAG00000021127) #22	ENSBTAG00000017734 #23	ENSBTAG00000051821 #23	FOXB2 (ENSBTAG00000032983)	ENSBTAG00000048354	PRUNE2 (ENSBTAG00000012991)	ENSBTAG00000053347	GCNT1 (ENSBTAG00000012757) #24	RFK (ENSBTAG00000019345) #25	PCSK5 (ENSBTAG00000008101) #26	ENSBTAG00000053085	OSTF1 (ENSBTAG00000002746) #27	NMRK1 (ENSBTAG00000019687) #28	CARNMT1 (ENSBTAG00000008204) #29	C8H9orf40 (ENSBTAG00000013231) #30	ENSBTAG00000051504 #31
American bison	MODERN SPECIES	3212								ENSBBBG00000013680	TLE1 (ENSBBBG00000008115) #17	ENSBBBG00000002908	TLE4 (ENSBBBG00000013848) #18	ENSBBBG00000013872	PSAT1 (ENSBBBG00000013891) #19	CEP78 (ENSBBBG00000006946) #20	GNAQ (ENSBBBG00000001428) #21	GNA14 (ENSBBBG00000014272) #22	ENSBBBG00000003245 #23
Caprinae	ANCESTRAL SPECIES	14	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##16	ENSGT00950000183043.b.b.g.a ##16	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##16	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00730000111116.j	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Goat	MODERN SPECIES	27	VCP (ENSCHIG00000018325)	DNAJB5 (ENSCHIG00000003729)	PHF24 (ENSCHIG00000018664)	ENSCHIG00000005785 ##16	ENSCHIG00000018064 ##16	ENSCHIG00000026697 #16	ENSCHIG00000018732 ##16	ENSCHIG00000000627 #16	TLE1 (ENSCHIG00000019014) #17	ENSCHIG00000010112	TLE4 (ENSCHIG00000019651) #18	PSAT1 (ENSCHIG00000023475) #19	CEP78 (ENSCHIG00000016639) #20	ENSCHIG00000023442	GNAQ (ENSCHIG00000011392) #21	GNA14 (ENSCHIG00000021016) #22	VPS13A (ENSCHIG00000020594) #23	FOXB2 (ENSCHIG00000004613)	ENSCHIG00000009127	ENSCHIG00000025880	GCNT1 (ENSCHIG00000011189) #24	RFK (ENSCHIG00000023491) #25	PCSK5 (ENSCHIG00000004522) #26	OSTF1 (ENSCHIG00000012972) #27	NMRK1 (ENSCHIG00000014343) #28	CARNMT1 (ENSCHIG00000024458) #29	C9orf40 (ENSCHIG00000012544) #30	TRPM6 (ENSCHIG00000019917) #31	RORB (ENSCHIG00000025702) #32	ENSCHIG00000012586	ANXA1 (ENSCHIG00000020923) #33
Siberian musk deer	MODERN SPECIES	29	VCP (ENSMMSG00000013911)	C9orf131 (ENSMMSG00000013953)	DNAJB5 (ENSMMSG00000014036)	PHF24 (ENSMMSG00000014079)	ENSMMSG00000014101 ##16	ENSMMSG00000014127 ##16	ENSMMSG00000014140	ENSMMSG00000014150	TLE1 (ENSMMSG00000014201) #17	ENSMMSG00000014332	TLE4 (ENSMMSG00000014344) #18	PSAT1 (ENSMMSG00000014424) #19	CEP78 (ENSMMSG00000014473) #20	ENSMMSG00000014588	ENSMMSG00000014599	GNA14 (ENSMMSG00000014616) #22	VPS13A (ENSMMSG00000014654) #23	FOXB2 (ENSMMSG00000014816)	PRUNE2 (ENSMMSG00000014836)	ENSMMSG00000014983	GCNT1 (ENSMMSG00000014991) #24	RFK (ENSMMSG00000015003) #25
Yarkand deer	MODERN SPECIES	21	VCP (ENSCHYG00000026503)	ENSCHYG00000026490	ENSCHYG00000026476	ENSCHYG00000026469	DNAJB5 (ENSCHYG00000026463)	PHF24 (ENSCHYG00000026447)	ENSCHYG00000026436 ##16	ENSCHYG00000026428 ##16	ENSCHYG00000026421	TLE1 (ENSCHYG00000026374) #17	TLE4 (ENSCHYG00000026147) #18	PSAT1 (ENSCHYG00000026067) #19	CEP78 (ENSCHYG00000025990) #20	GNAQ (ENSCHYG00000025937) #21	ENSCHYG00000025920	GNA14 (ENSCHYG00000025896) #22	ENSCHYG00000025887	VPS13A (ENSCHYG00000025803) #23	FOXB2 (ENSCHYG00000025745)	PRUNE2 (ENSCHYG00000025376)	ENSCHYG00000025314	ENSCHYG00000025302	ENSCHYG00000025284 #25	PCSK5 (ENSCHYG00000024685) #26	ENSCHYG00000024600	ENSCHYG00000024591	OSTF1 (ENSCHYG00000024488) #27	ENSCHYG00000024377 #28	CARNMT1 (ENSCHYG00000024319) #29	C9orf40 (ENSCHYG00000024308) #30	TRPM6 (ENSCHYG00000024016) #31
Cetacea	ANCESTRAL SPECIES	9	ENSGT00910000144278	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##16	ENSGT00950000183043.a.b.b.a.a.b ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000162764.A.a.b	ENSGT00940000153241.A #19	ENSGT00390000013287.t #20	ENSGT00940000161347 #21	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.v.a.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00910000148416	ENSGT00390000005323 #29	ENSGT00390000001325.a #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Blue whale	MODERN SPECIES	17	ENSBMSG00010004636	ENSBMSG00010004629	DNAJB5 (ENSBMSG00010004603)	PHF24 (ENSBMSG00010004582)	ENSBMSG00010004559 ##16	ENSBMSG00010004542 ##16	ENSBMSG00010004490	TLE1 (ENSBMSG00010004448) #17	ENSBMSG00010004414	TLE4 (ENSBMSG00010004237) #18	ENSBMSG00010004201	PSAT1 (ENSBMSG00010004175) #19	ENSBMSG00010004135 #20	GNAQ (ENSBMSG00010004092) #21	ENSBMSG00010004083	GNA14 (ENSBMSG00010004068) #22	ENSBMSG00010004060	VPS13A (ENSBMSG00010003835) #23	FOXB2 (ENSBMSG00010003713)	ENSBMSG00010003588	GCNT1 (ENSBMSG00010003536) #24	ENSBMSG00010003531 #25	PCSK5 (ENSBMSG00010003436) #26	ENSBMSG00010003413 #27	NMRK1 (ENSBMSG00010003405) #28	ENSBMSG00010003397	CARNMT1 (ENSBMSG00010003386) #29	C9orf40 (ENSBMSG00010003380) #30	TRPM6 (ENSBMSG00010003340) #31	RORB (ENSBMSG00010003300) #32	ENSBMSG00010003286
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##16	ENSGT00950000183043.a.b.b.a.a.b ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00390000017385.n	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000162764.A.a.b.b	ENSGT00940000153241.A #19	ENSGT00390000013287.t #20	ENSGT00940000161347 #21	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.v.a.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00910000148416	ENSGT00390000005323 #29	ENSGT00390000001325.a #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Sperm whale	MODERN SPECIES	20	FANCG (ENSPCTG00005000387)	VCP (ENSPCTG00005000426)	C9orf131 (ENSPCTG00005000462)	DNAJB5 (ENSPCTG00005000482)	ENSPCTG00005000497	PHF24 (ENSPCTG00005000516)	TLE1 (ENSPCTG00005000556) #17	ENSPCTG00005000593	TLE4 (ENSPCTG00005000639) #18	ENSPCTG00005000680	PSAT1 (ENSPCTG00005000704) #19	ENSPCTG00005000736 #20	ENSPCTG00005000743 #20	GNAQ (ENSPCTG00005000756) #21	ENSPCTG00005000769	GNA14 (ENSPCTG00005000786) #22	VPS13A (ENSPCTG00005000866) #23	ENSPCTG00005000922	FOXB2 (ENSPCTG00005000930)	PRUNE2 (ENSPCTG00005000981)	GCNT1 (ENSPCTG00005001079) #24	ENSPCTG00005001091	RFK (ENSPCTG00005001107) #25	PCSK5 (ENSPCTG00005001143) #26	OSTF1 (ENSPCTG00005001197) #27	NMRK1 (ENSPCTG00005001209) #28	ENSPCTG00005001226	CARNMT1 (ENSPCTG00005001249) #29	C9H9orf40 (ENSPCTG00005001272) #30	TRPM6 (ENSPCTG00005001419) #31	RORB (ENSPCTG00005001849) #32
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT00390000007195	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.a ##16	ENSGT00950000183043.a.b.b.a.a.b ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00390000017385.n	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000162764.A.a.b.b	ENSGT00940000153241.A.e #19	ENSGT00390000013287.t #20	ENSGT00940000161347 #21	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.v.a.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325.a #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Dolphin	MODERN SPECIES	2753																GNA14 (ENSTTRG00000011603) #22	VPS13A (ENSTTRG00000011573) #23	FOXB2 (ENSTTRG00000011568)
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##16	ENSGT00950000183043.b.b.g.a ##16	ENSGT00390000017004.a.a.l	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00390000017385.n	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000162764.A.a.b.b	ENSGT00940000153241.A.e #19	ENSGT00390000013287.t #20	ENSGT00940000161347 #21	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.v.a.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325.a #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Vaquita	MODERN SPECIES	17	ENSPSNG00000019306	ENSPSNG00000019344	DNAJB5 (ENSPSNG00000019366)	PHF24 (ENSPSNG00000019479)	ENSPSNG00000019507 ##16	ENSPSNG00000019554	ENSPSNG00000019585 ##16	ENSPSNG00000019680 ##16	ENSPSNG00000019722	TLE1 (ENSPSNG00000019950) #17	TLE4 (ENSPSNG00000020039) #18	ENSPSNG00000020147	PSAT1 (ENSPSNG00000020230) #19	ENSPSNG00000020316 #20	GNAQ (ENSPSNG00000020419) #21	GNA14 (ENSPSNG00000020441) #22	VPS13A (ENSPSNG00000020544) #23	ENSPSNG00000020679	ENSPSNG00000020710	FOXB2 (ENSPSNG00000020723)	ENSPSNG00000020742	GCNT1 (ENSPSNG00000020765) #24	ENSPSNG00000020791 #25	PCSK5 (ENSPSNG00000020871) #26	ENSPSNG00000020965 #27	NMRK1 (ENSPSNG00000021002) #28	CARNMT1 (ENSPSNG00000021060) #29	C9orf40 (ENSPSNG00000021139) #30	TRPM6 (ENSPSNG00000021209) #31	ENSPSNG00000021377	RORB (ENSPSNG00000021397) #32
Monodontidae	ANCESTRAL SPECIES	5	ENSGT00900000141071	ENSGT00390000000748	ENSGT00940000156090.a	ENSGT00390000002865	ENSGT00950000183043.a.b.b.a.a.a.a.a.b ##16	ENSGT00950000183043.b.b.g.a ##16	ENSGT00390000017004.a.a.l	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00390000017385.n	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000162764.A.a.b.b	ENSGT00940000153241.A.e #19	ENSGT00390000013287.t #20	ENSGT00940000161347 #21	ENSGT00390000005589.a.b.k.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.v.a.a #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325.a #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Narwhal	MODERN SPECIES	312	ENSMMNG00015016439 ##16	ENSMMNG00015016418	ENSMMNG00015016384 ##16	ENSMMNG00015016311	ENSMMNG00015016295 ##16	TLE1 (ENSMMNG00015016128) #17	ENSMMNG00015016069	ENSMMNG00015016037	ENSMMNG00015015982	TLE4 (ENSMMNG00015015825) #18	ENSMMNG00015015725	PSAT1 (ENSMMNG00015015696) #19	ENSMMNG00015015512 #20	GNAQ (ENSMMNG00015015412) #21	ENSMMNG00015015399	GNA14 (ENSMMNG00015015382) #22	ENSMMNG00015015370	VPS13A (ENSMMNG00015015293) #23	FOXB2 (ENSMMNG00015015204)	ENSMMNG00015015183	ENSMMNG00015015151	ENSMMNG00015015130 #25	PCSK5 (ENSMMNG00015014930) #26	ENSMMNG00015014836 #27	NMRK1 (ENSMMNG00015014803) #28	CARNMT1 (ENSMMNG00015014708) #29	ENSMMNG00015014689 #30	TRPM6 (ENSMMNG00015014567) #31	RORB (ENSMMNG00015014483) #32	ANXA1 (ENSMMNG00015014451) #33	ALDH1A1 (ENSMMNG00015014430) #35
Beluga whale	MODERN SPECIES	50	VCP (ENSDLEG00000021246)	ENSDLEG00000021251	DNAJB5 (ENSDLEG00000021254)	PHF24 (ENSDLEG00000021258)	ENSDLEG00000021261 ##16	ENSDLEG00000021264	ENSDLEG00000021267 ##16	ENSDLEG00000021271	TLE1 (ENSDLEG00000021275) #17	ENSDLEG00000021281	TLE4 (ENSDLEG00000021283) #18	ENSDLEG00000021285	ENSDLEG00000021289 #19	ENSDLEG00000021309 #20	GNAQ (ENSDLEG00000021362) #21	ENSDLEG00000021366 #22	VPS13A (ENSDLEG00000021392) #23	ENSDLEG00000008006	FOXB2 (ENSDLEG00000008017)	PRUNE2 (ENSDLEG00000008030)	GCNT1 (ENSDLEG00000008169) #24	RFK (ENSDLEG00000008189) #25	PCSK5 (ENSDLEG00000008227) #26	ENSDLEG00000008342 #27	NMRK1 (ENSDLEG00000008464) #28	CARNMT1 (ENSDLEG00000008504) #29	CUNH9orf40 (ENSDLEG00000008530) #30	TRPM6 (ENSDLEG00000008592) #31	RORB (ENSDLEG00000008845) #32	ANXA1 (ENSDLEG00000008888) #33	ALDH1A1 (ENSDLEG00000008942) #35
Laurasiatheria_b	ANCESTRAL SPECIES	11	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Carnivora	ANCESTRAL SPECIES	25	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Caniformia	ANCESTRAL SPECIES	29	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Caniformia_b	ANCESTRAL SPECIES	32	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Ursidae	ANCESTRAL SPECIES	43	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.l #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221.r #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Ursus	ANCESTRAL SPECIES	280											ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.k #23
American black bear	MODERN SPECIES	5259																ENSUAMG00000020040 #22	ENSUAMG00000020043 #23
Polar bear	MODERN SPECIES	171										TLE1 (ENSUMAG00000023213) #17	ENSUMAG00000023163	TLE4 (ENSUMAG00000023158) #18	PSAT1 (ENSUMAG00000023147) #19	CEP78 (ENSUMAG00000023079) #20	GNAQ (ENSUMAG00000023048) #21	GNA14 (ENSUMAG00000023042) #22	ENSUMAG00000023039	VPS13A (ENSUMAG00000022379) #23	ENSUMAG00000022179	ENSUMAG00000022172	GCNT1 (ENSUMAG00000022168) #24	RFK (ENSUMAG00000022167) #25	ENSUMAG00000022155 #26	OSTF1 (ENSUMAG00000022148) #27	ENSUMAG00000022147 #28	CARNMT1 (ENSUMAG00000022143) #29	TRPM6 (ENSUMAG00000022132) #31	RORB (ENSUMAG00000022082) #32	ANXA1 (ENSUMAG00000022067) #33	ENSUMAG00000022048 #35	ENSUMAG00000021983 #35
Giant Panda	MODERN SPECIES	8	NTRK2 (ENSAMEG00000003994)	SLC28A3 (ENSAMEG00000003963)	RMI1 (ENSAMEG00000019422) #7	HNRNPK (ENSAMEG00000003926) ##8	C9orf64 (ENSAMEG00000003917) #9	KIF27 (ENSAMEG00000003891) #10	GKAP1 (ENSAMEG00000003861) #11	UBQLN1 (ENSAMEG00000003825) #12	IDNK (ENSAMEG00000003818) #13	FRMD3 (ENSAMEG00000003807) #14	RASEF (ENSAMEG00000009467) #15	TLE1 (ENSAMEG00000014488) #17	TLE4 (ENSAMEG00000008536) #18	PSAT1 (ENSAMEG00000006898) #19	GNAQ (ENSAMEG00000005271) #21	GNA14 (ENSAMEG00000005279) #22	VPS13A (ENSAMEG00000005296) #23	ENSAMEG00000023684	PRUNE2 (ENSAMEG00000003568)	GCNT1 (ENSAMEG00000019017) #24	RFK (ENSAMEG00000003553) #25	PCSK5 (ENSAMEG00000003447) #26	OSTF1 (ENSAMEG00000005324) #27	NMRK1 (ENSAMEG00000005312) #28	CARNMT1 (ENSAMEG00000005299) #29	C9orf40 (ENSAMEG00000019087) #30	TRPM6 (ENSAMEG00000015683) #31	RORB (ENSAMEG00000015664) #32	ANXA1 (ENSAMEG00000015540) #33	ENSAMEG00000025347 #35	TMC1 (ENSAMEG00000007299) #36
Mustelinae	ANCESTRAL SPECIES	87												ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Ferret	MODERN SPECIES	332										ENSMPUG00000012594	TLE4 (ENSMPUG00000012590) #18	ENSMPUG00000012588	PSAT1 (ENSMPUG00000012566) #19	CEP78 (ENSMPUG00000012559) #20	GNAQ (ENSMPUG00000012554) #21	GNA14 (ENSMPUG00000012547) #22	VPS13A (ENSMPUG00000012524) #23	FOXB2 (ENSMPUG00000012521)	PRUNE2 (ENSMPUG00000012517)	GCNT1 (ENSMPUG00000018578) #24	RFK (ENSMPUG00000012511) #25	PCSK5 (ENSMPUG00000012343) #26	ENSMPUG00000018576	OSTF1 (ENSMPUG00000012340) #27	NMRK1 (ENSMPUG00000012337) #28	CARNMT1 (ENSMPUG00000012334) #29
American mink	MODERN SPECIES	72										ENSNVIG00000014390	TLE4 (ENSNVIG00000014309) #18	PSAT1 (ENSNVIG00000014279) #19	CEP78 (ENSNVIG00000013964) #20	GNAQ (ENSNVIG00000013949) #21	ENSNVIG00000013946	GNA14 (ENSNVIG00000013931) #22	VPS13A (ENSNVIG00000012690) #23	FOXB2 (ENSNVIG00000012653)	PRUNE2 (ENSNVIG00000012503)	GCNT1 (ENSNVIG00000012487) #24	RIFK (ENSNVIG00000012475) #25	PCSK5 (ENSNVIG00000012403) #26	OSTF1 (ENSNVIG00000012393) #27	NMRK1 (ENSNVIG00000012371) #28	CARNMT1 (ENSNVIG00000012354) #29	C9orf40 (ENSNVIG00000012345) #30	TRPM6 (ENSNVIG00000011669) #31	RORB (ENSNVIG00000011617) #32	ENSNVIG00000011556 #33	ALDH1A1 (ENSNVIG00000011532) #35	TMC1 (ENSNVIG00000011459) #36
Canidae	ANCESTRAL SPECIES	47	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.g #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000153305.d.cb.a.b	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000157487.ib #10	ENSGT01100000263605.i.a	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00950000182805.a.a.a.b.j.k.a	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A.g #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000153305.d.cb.a.b	ENSGT00940000155221 #33	ENSGT00940000154609 #35
Dog	MODERN SPECIES		GKAP1 (ENSCAFG00845006032) #11	UBQLN1 (ENSCAFG00845006162) #12	IDNK (ENSCAFG00845006259) #13	FRMD3 (ENSCAFG00845006384) #14	RASEF (ENSCAFG00845006700) #15	ENSCAFG00845006862 #16	TLE1 (ENSCAFG00845007046) #17	ENSCAFG00845007319	ENSCAFG00845007343	ENSCAFG00845007360	ENSCAFG00845007380	TLE4 (ENSCAFG00845007658) #18	PSAT1 (ENSCAFG00845008158) #19	CEP78 (ENSCAFG00845008575) #20	GNAQ (ENSCAFG00845009564) #21	GNA14 (ENSCAFG00845009597) #22	VPS13A (ENSCAFG00845009740) #23	FOXB2 (ENSCAFG00845010290)	PRUNE2 (ENSCAFG00845010363)	GCNT1 (ENSCAFG00845010790) #24	RFK (ENSCAFG00845010840) #25	PCSK5 (ENSCAFG00845010995) #26	ENSCAFG00845011478	ENSCAFG00845011513 #27	ENSCAFG00845011554 #27	NMRK1 (ENSCAFG00845011585) #28	CARNMT1 (ENSCAFG00845011707) #29	C1H9orf40 (ENSCAFG00845011724) #30	TRPM6 (ENSCAFG00845011822) #31	RORB (ENSCAFG00845012330) #32	ENSCAFG00845012398
Dingo	MODERN SPECIES	125	IDNK (ENSCAFG00020023839) #13	FRMD3 (ENSCAFG00020023845) #14	RASEF (ENSCAFG00020023859) #15	ENSCAFG00020023896	ENSCAFG00020023897	ENSCAFG00020023899 #16	TLE1 (ENSCAFG00020023903) #17	ENSCAFG00020023907	ENSCAFG00020023908	ENSCAFG00020023910	ENSCAFG00020023912	TLE4 (ENSCAFG00020023935) #18	ENSCAFG00020024577 #19	CEP78 (ENSCAFG00020024607) #20	GNAQ (ENSCAFG00020024672) #21	GNA14 (ENSCAFG00020024695) #22	ENSCAFG00020024709 #23	ENSCAFG00020024713 #23	ENSCAFG00020024717	ENSCAFG00020024719	ENSCAFG00020024730	ENSCAFG00020024732	GCNT1 (ENSCAFG00020024738) #24	RFK (ENSCAFG00020024745) #25	PCSK5 (ENSCAFG00020024848) #26	ENSCAFG00020025484	ENSCAFG00020025485	ENSCAFG00020025486	OSTF1 (ENSCAFG00020025488) #27	NMRK1 (ENSCAFG00020025490) #28	ENSCAFG00020025491 #29
Red fox	MODERN SPECIES	37										ENSVVUG00000001369	ENSVVUG00000001377	TLE4 (ENSVVUG00000001430) #18	ENSVVUG00000001473 #19	CEP78 (ENSVVUG00000001495) #20	GNAQ (ENSVVUG00000001540) #21	GNA14 (ENSVVUG00000001563) #22	VPS13A (ENSVVUG00000001749) #23	ENSVVUG00000001950 #23	ENSVVUG00000001964	ENSVVUG00000001998	PRUNE2 (ENSVVUG00000002061)	RFK (ENSVVUG00000002092) #25	PCSK5 (ENSVVUG00000002152) #26	OSTF1 (ENSVVUG00000002259) #27	NMRK1 (ENSVVUG00000002291) #28	ENSVVUG00000002307	CARNMT1 (ENSVVUG00000002327) #29	ENSVVUG00000002351	TRPM6 (ENSVVUG00000002363) #31	RORB (ENSVVUG00000002470) #32	ENSVVUG00000003173
Felidae	ANCESTRAL SPECIES	28	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00390000018085.a.b.b	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Panthera	ANCESTRAL SPECIES	34	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00390000018085.a.b.b	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Panthera_a	ANCESTRAL SPECIES	35	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00390000018085.a.b.b	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000157455.b.b.b	ENSGT00940000154609 #35
lion	MODERN SPECIES	13	RMI1 (ENSPLOG00000013722) #7	HNRNPK (ENSPLOG00000013759) ##8	C9orf64 (ENSPLOG00000013829) #9	KIF27 (ENSPLOG00000013951) #10	GKAP1 (ENSPLOG00000014120) #11	UBQLN1 (ENSPLOG00000014300) #12	IDNK (ENSPLOG00000014593) #13	FRMD3 (ENSPLOG00000014784) #14	RASEF (ENSPLOG00000005557) #15	TLE1 (ENSPLOG00000005932) #17	TLE4 (ENSPLOG00000006108) #18	ENSPLOG00000006291	PSAT1 (ENSPLOG00000006318) #19	CEP78 (ENSPLOG00000006418) #20	GNAQ (ENSPLOG00000006541) #21	GNA14 (ENSPLOG00000006582) #22	VPS13A (ENSPLOG00000006980) #23	FOXB2 (ENSPLOG00000008702)	PRUNE2 (ENSPLOG00000008778)	GCNT1 (ENSPLOG00000009043) #24	RFK (ENSPLOG00000009075) #25	PCSK5 (ENSPLOG00000009159) #26	OSTF1 (ENSPLOG00000009605) #27	NMRK1 (ENSPLOG00000009658) #28	CARNMT1 (ENSPLOG00000009718) #29	C9orf40 (ENSPLOG00000009758) #30	TRPM6 (ENSPLOG00000009865) #31	RORB (ENSPLOG00000010628) #32	ANXA1 (ENSPLOG00000010824) #33	ENSPLOG00000010872	ALDH1A1 (ENSPLOG00000010882) #35
leopard	MODERN SPECIES	42											TLE4 (ENSPPRG00000002657) #18	ENSPPRG00000020842	PSAT1 (ENSPPRG00000000680) #19	CEP78 (ENSPPRG00000022688) #20	GNAQ (ENSPPRG00000023191) #21	GNA14 (ENSPPRG00000023254) #22	ENSPPRG00000023314	VPS13A (ENSPPRG00000023867) #23	ENSPPRG00000019426	ENSPPRG00000018788	ENSPPRG00000018607	GCNT1 (ENSPPRG00000020438) #24	RFK (ENSPPRG00000018334) #25	PCSK5 (ENSPPRG00000015616) #26	OSTF1 (ENSPPRG00000014712) #27	NMRK1 (ENSPPRG00000013152) #28	CARNMT1 (ENSPPRG00000012920) #29	ENSPPRG00000020310	C9orf40 (ENSPPRG00000012911) #30	ENSPPRG00000020296	TRPM6 (ENSPPRG00000012646) #31
Tiger	MODERN SPECIES	101												TLE4 (ENSPTIG00000019084) #18	PSAT1 (ENSPTIG00000018344) #19	CEP78 (ENSPTIG00000015052) #20	GNAQ (ENSPTIG00000013977) #21	GNA14 (ENSPTIG00000013203) #22	VPS13A (ENSPTIG00000019104) #23	ENSPTIG00000018318	ENSPTIG00000005329	ENSPTIG00000017898	RFK (ENSPTIG00000016018) #25	PCSK5 (ENSPTIG00000010972) #26	OSTF1 (ENSPTIG00000009600) #27	NMRK1 (ENSPTIG00000007642) #28	CARNMT1 (ENSPTIG00000007361) #29	TRPM6 (ENSPTIG00000018404) #31	RORB (ENSPTIG00000017145) #32	ANXA1 (ENSPTIG00000016582) #33	ALDH1A1 (ENSPTIG00000015084) #35	TMC1 (ENSPTIG00000012847) #36	ZFAND5 (ENSPTIG00000012129) #37
Cat	MODERN SPECIES	244	RMI1 (ENSFCAG00000014864) #7	HNRNPK (ENSFCAG00000014862) ##8	CD4H9orf64 (ENSFCAG00000035394) #9	KIF27 (ENSFCAG00000013331) #10	GKAP1 (ENSFCAG00000031248) #11	IDNK (ENSFCAG00000000492) #13	UBQLN1 (ENSFCAG00000015049) #12	FRMD3 (ENSFCAG00000023456) #14	RASEF (ENSFCAG00000002416) #15	TLE1 (ENSFCAG00000003893) #17	TLE4 (ENSFCAG00000002339) #18	ENSFCAG00000031069	PSAT1 (ENSFCAG00000024154) #19	CEP78 (ENSFCAG00000007763) #20	GNAQ (ENSFCAG00000024503) #21	GNA14 (ENSFCAG00000008471) #22	VPS13A (ENSFCAG00000000749) #23	FOXB2 (ENSFCAG00000046576)	PRUNE2 (ENSFCAG00000029198)	GCNT1 (ENSFCAG00000030141) #24	RFK (ENSFCAG00000039390) #25	PCSK5 (ENSFCAG00000027896) #26	OSTF1 (ENSFCAG00000022374) #27	NMRK1 (ENSFCAG00000035848) #28	CARNMT1 (ENSFCAG00000028436) #29	C9orf40 (ENSFCAG00000030577) #30	TRPM6 (ENSFCAG00000011422) #31	RORB (ENSFCAG00000011421) #32	ANXA1 (ENSFCAG00000015263) #33	ALDH1A1 (ENSFCAG00000009133) #35	TMC1 (ENSFCAG00000043213) #36
Laurasiatheria_c	ANCESTRAL SPECIES	11	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Equus	ANCESTRAL SPECIES	70	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b.i.b.a.b.b.b #16	ENSGT00950000183043.a.b.b.a.b.i.a.a.a #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00390000015537.x #25	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.w #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29
Donkey	MODERN SPECIES	22	ENSEASG00005009587	ZFAND5 (ENSEASG00005009586) #37	TMC1 (ENSEASG00005036859) #36	ALDH1A1 (ENSEASG00005009584) #35	ANXA1 (ENSEASG00005007925) #33	RORB (ENSEASG00005007922) #32	TRPM6 (ENSEASG00005007843) #31	ENSEASG00005007794 #30	ENSEASG00005027501 #16	ENSEASG00005005051 #17	TLE4 (ENSEASG00005005032) #18	PSAT1 (ENSEASG00005005021) #19	CEP78 (ENSEASG00005005009) #20	ENSEASG00005005001 #25	GNAQ (ENSEASG00005004998) #21	GNA14 (ENSEASG00005004986) #22	VPS13A (ENSEASG00005004923) #23	ENSEASG00005004789	ENSEASG00005034399	PRUNE2 (ENSEASG00005004758)	GCNT1 (ENSEASG00005030619) #24	ENSEASG00005004752 #25	PCSK5 (ENSEASG00005004745) #26	OSTF1 (ENSEASG00005004735) #27	ENSEASG00005004722 #28	ENSEASG00005004711 #29	ENSEASG00005033852	ENSEASG00005024562	ENSEASG00005031255	ENSEASG00005035670	ENSEASG00005034160
Horse	MODERN SPECIES	15	ENSECAG00000035038	ENSECAG00000009881	ENSECAG00000034991	ENSECAG00000052440	FRMD3 (ENSECAG00000007878) #14	ENSECAG00000044353	RASEF (ENSECAG00000000324) #15	ENSECAG00000018120 #16	ENSECAG00000035266 #16	TLE1 (ENSECAG00000013680) #17	TLE4 (ENSECAG00000009982) #18	PSAT1 (ENSECAG00000017903) #19	CEP78 (ENSECAG00000012634) #20	ENSECAG00000028496 #25	GNAQ (ENSECAG00000018363) #21	GNA14 (ENSECAG00000020518) #22	VPS13A (ENSECAG00000020865) #23	ENSECAG00000033811	PRUNE2 (ENSECAG00000010004)	GCNT1 (ENSECAG00000020201) #24	ENSECAG00000037215 #25	PCSK5 (ENSECAG00000006788) #26	OSTF1 (ENSECAG00000019624) #27	NMRK1 (ENSECAG00000007336) #28	CARNMT1 (ENSECAG00000013964) #29	ANXA1 (ENSECAG00000015794) #33	ENSECAG00000038056 ##16	ENSECAG00000041820 #16	RORB (ENSECAG00000024312) #32	TRPM6 (ENSECAG00000015942) #31	ENSECAG00000052040
Chiroptera	ANCESTRAL SPECIES	40	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Megabat	MODERN SPECIES	6117																GNA14 (ENSPVAG00000012213) #22
Microchiroptera	ANCESTRAL SPECIES	36	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.ib #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.b #16	ENSGT00950000183043.a.b.b.a.a.a.a.a.a ##16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Greater horseshoe bat	MODERN SPECIES	3	C9orf64 (ENSRFEG00010014739) #9	KIF27 (ENSRFEG00010014622) #10	UBQLN1 (ENSRFEG00010014096) #12	IDNK (ENSRFEG00010013969) #13	FRMD3 (ENSRFEG00010013516) #14	RASEF (ENSRFEG00010013434) #15	ENSRFEG00010013409	TLE1 (ENSRFEG00010013065) #17	ENSRFEG00010012998	TLE4 (ENSRFEG00010012773) #18	ENSRFEG00010012640 #19	CEP78 (ENSRFEG00010012426) #20	GNAQ (ENSRFEG00010012381) #21	ENSRFEG00010012361	ENSRFEG00010012344	GNA14 (ENSRFEG00010012288) #22	ENSRFEG00010012234	VPS13A (ENSRFEG00010011976) #23	FOXB2 (ENSRFEG00010011890)	PRUNE2 (ENSRFEG00010011665)	GCNT1 (ENSRFEG00010011618) #24	RFK (ENSRFEG00010011567) #25	PCSK5 (ENSRFEG00010011327) #26	OSTF1 (ENSRFEG00010011253) #27	NMRK1 (ENSRFEG00010011161) #28	CARNMT1 (ENSRFEG00010011074) #29	C9orf40 (ENSRFEG00010011017) #30	TRPM6 (ENSRFEG00010009962) #31	RORB (ENSRFEG00010009768) #32	ENSRFEG00010009637 #33	ENSRFEG00010009582
Microbat	MODERN SPECIES	968	RASEF (ENSMLUG00000013108) #15	ENSMLUG00000022623 #16	ENSMLUG00000022889 ##16	TLE1 (ENSMLUG00000003088) #17	ENSMLUG00000026478	ENSMLUG00000022957	TLE4 (ENSMLUG00000005564) #18	ENSMLUG00000026096	ENSMLUG00000029964	ENSMLUG00000022667 #16	ENSMLUG00000026585	PSAT1 (ENSMLUG00000010261) #19	CEP78 (ENSMLUG00000010238) #20	ENSMLUG00000006026	GNAQ (ENSMLUG00000003741) #21	GNA14 (ENSMLUG00000003737) #22	VPS13A (ENSMLUG00000003688) #23	PRUNE2 (ENSMLUG00000001535)	GCNT1 (ENSMLUG00000001534) #24	RFK (ENSMLUG00000015223) #25	PCSK5 (ENSMLUG00000015196) #26	OSTF1 (ENSMLUG00000008299) #27	NMRK1 (ENSMLUG00000008290) #28	ENSMLUG00000008278 #29	TRPM6 (ENSMLUG00000006442) #31	ENSMLUG00000023224	RORB (ENSMLUG00000006436) #32	ENSMLUG00000006572	ANXA1 (ENSMLUG00000000473) #33	ENSMLUG00000022963 #34	ALDH1A1 (ENSMLUG00000007209) #35
Atlantogenata	ANCESTRAL SPECIES	67	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT00950000183043.a.b.b.a.a.b ##16	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Afrotheria	ANCESTRAL SPECIES	75	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Afrotheria_a	ANCESTRAL SPECIES	74	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT00940000164433	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00390000001325 #30	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609.ob.b #35
Hyrax	MODERN SPECIES	6921																GNA14 (ENSPCAG00000006731) #22	VPS13A (ENSPCAG00000006360) #23
Elephant	MODERN SPECIES	472	KIF27 (ENSLAFG00000017658) #10	GKAP1 (ENSLAFG00000011867) #11	UBQLN1 (ENSLAFG00000016447) #12	IDNK (ENSLAFG00000026646) #13	FRMD3 (ENSLAFG00000007148) #14	RASEF (ENSLAFG00000010552) #15	TLE1 (ENSLAFG00000004803) #17	ENSLAFG00000031777	ENSLAFG00000014287	TLE4 (ENSLAFG00000012471) #18	ENSLAFG00000029717	ENSLAFG00000030525 #16	PSAT1 (ENSLAFG00000017917) #19	CEP78 (ENSLAFG00000012846) #20	GNAQ (ENSLAFG00000001575) #21	GNA14 (ENSLAFG00000008566) #22	VPS13A (ENSLAFG00000008547) #23	FOXB2 (ENSLAFG00000022363)	ENSLAFG00000018547	GCNT1 (ENSLAFG00000021806) #24	ENSLAFG00000011147 #25	PCSK5 (ENSLAFG00000015309) #26	OSTF1 (ENSLAFG00000015441) #27	NMRK1 (ENSLAFG00000005888) #28	CARNMT1 (ENSLAFG00000007066) #29	C9orf40 (ENSLAFG00000007065) #30	ENSLAFG00000028704 #31	ENSLAFG00000004612 #31	RORB (ENSLAFG00000012757) #32	ANXA1 (ENSLAFG00000009163) #33	ENSLAFG00000029788 #34
Tenrec	MODERN SPECIES	7556															GNAQ (ENSETEG00000000740) #21	GNA14 (ENSETEG00000000736) #22
Xenarthra	ANCESTRAL SPECIES	517									ENSGT00950000183043.a.b.b.a.a.b ##16	ENSGT00950000183043.a.b.b.a.b #16	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23
Armadillo	MODERN SPECIES	3656									ENSDNOG00000048345 ##16	ENSDNOG00000036520 #16	TLE1 (ENSDNOG00000000937) #17	TLE4 (ENSDNOG00000011349) #18	PSAT1 (ENSDNOG00000034862) #19	CEP78 (ENSDNOG00000002843) #20	ENSDNOG00000006353	GNA14 (ENSDNOG00000006349) #22	VPS13A (ENSDNOG00000006286) #23	ENSDNOG00000031463	ENSDNOG00000046646	FOXB2 (ENSDNOG00000041384)
Sloth	MODERN SPECIES	7318																GNA14 (ENSCHOG00000006744) #22	VPS13A (ENSCHOG00000006671) #23
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287.db.a #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.fb #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287.db.a #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a
Diprotodontia	ANCESTRAL SPECIES	21	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.fb #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287.db.a #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a
Diprotodontia_a	ANCESTRAL SPECIES	17	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.fb.a #10	ENSGT00390000008742 #11	ENSGT00940000156437 #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287.db.a #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00940000157664	ENSGT00940000157173	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00550000075033	ENSGT00390000003561	ENSGT00950000183038.a.b.b.a	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1066	ENSVURG00010019808 ##8	ENSVURG00010019847 #9	ENSVURG00010019852 #10	ENSVURG00010019882 #11	ENSVURG00010019908 #12	ENSVURG00010019946 #13	ENSVURG00010019961 #14	ENSVURG00010020018 #15	ENSVURG00010020065	ENSVURG00010020081 #17	ENSVURG00010020103	ENSVURG00010020119 #18	ENSVURG00010020163 #19	ENSVURG00010000421 #20	GNAQ (ENSVURG00010000588) #21	ENSVURG00010000975 #22	ENSVURG00010001020 #23	ENSVURG00010001103	ENSVURG00010001165	ENSVURG00010001227	ENSVURG00010001214	GCNT1 (ENSVURG00010001238) #24	ENSVURG00010001354	ENSVURG00010001572	ENSVURG00010001697	ENSVURG00010001751	ENSVURG00010001761	ENSVURG00010001782	ENSVURG00010001827	ENSVURG00010001888	ENSVURG00010001910
Common wonbat	MODERN SPECIES	1066	ENSVURG00010015615 #9	ENSVURG00010015628 #10	ENSVURG00010015650 #11	ENSVURG00010015676 #12	ENSVURG00010015680 #13	ENSVURG00010015703 #14	ENSVURG00010015728	ENSVURG00010015787 #15	ENSVURG00010016176	ENSVURG00010016194	ENSVURG00010016210 #17	ENSVURG00010016243	ENSVURG00010016303 #18	ENSVURG00010016375 #19	ENSVURG00010016387 #20	ENSVURG00010016447 #22	ENSVURG00010016470	ENSVURG00010016491 #23	ENSVURG00010016551	ENSVURG00010016561	ENSVURG00010016577	ENSVURG00010016612	ENSVURG00010016646	ENSVURG00010016686	ENSVURG00010016697	ENSVURG00010016707	ENSVURG00010016712	ENSVURG00010016728	ENSVURG00010016739	ENSVURG00010016751	ENSVURG00010016764
koala	MODERN SPECIES	59												TLE4 (ENSPCIG00000006249) #18	PSAT1 (ENSPCIG00000012123) #19	ENSPCIG00000012127 #20	GNAQ (ENSPCIG00000012132) #21	GNA14 (ENSPCIG00000030641) #22	VPS13A (ENSPCIG00000010866) #23	FOXB2 (ENSPCIG00000031696)	ENSPCIG00000021277	ENSPCIG00000014745	ENSPCIG00000014743	ANKS6 (ENSPCIG00000000722)	ENSPCIG00000000733	ENSPCIG00000000782	TGFBR1 (ENSPCIG00000000853)	ALG2 (ENSPCIG00000000867)	SEC61B (ENSPCIG00000000880)	ENSPCIG00000014397	NR4A3 (ENSPCIG00000025397)	ENSPCIG00000026489	ERP44 (ENSPCIG00000026488)
Wallaby	MODERN SPECIES	6136																GNA14 (ENSMEUG00000015944) #22
Tasmanian devil	MODERN SPECIES		RMI1 (ENSSHAG00000017088) #7	HNRNPK (ENSSHAG00000017109) ##8	C9orf64 (ENSSHAG00000017219) #9	KIF27 (ENSSHAG00000017257) #10	GKAP1 (ENSSHAG00000027385) #11	UBQLN1 (ENSSHAG00000017673) #12	IDNK (ENSSHAG00000022655) #13	FRMD3 (ENSSHAG00000029377) #14	ENSSHAG00000023779	RASEF (ENSSHAG00000031366) #15	TLE1 (ENSSHAG00000010221) #17	TLE4 (ENSSHAG00000017709) #18	PSAT1 (ENSSHAG00000018888) #19	ENSSHAG00000018907 #20	GNAQ (ENSSHAG00000009733) #21	GNA14 (ENSSHAG00000027605) #22	VPS13A (ENSSHAG00000003917) #23	ENSSHAG00000030882	FOXB2 (ENSSHAG00000027905)	ENSSHAG00000001230	ENSSHAG00000029693	ENSSHAG00000026570	ENSSHAG00000003631 #24	ENSSHAG00000017605	ENSSHAG00000017474	COL15A1 (ENSSHAG00000016845)	TGFBR1 (ENSSHAG00000016699)	ALG2 (ENSSHAG00000021066)	SEC61B (ENSSHAG00000023694)	NR4A3 (ENSSHAG00000013487)	STX17 (ENSSHAG00000030239)
Opossum	MODERN SPECIES	5	ENSMODG00000044653	ENSMODG00000039525	ENSMODG00000051066	ENSMODG00000051332	ENSMODG00000045132	ENSMODG00000037285	ENSMODG00000016245	ENSMODG00000043875	ENSMODG00000047503	ENSMODG00000016240	ENSMODG00000049300	ENSMODG00000046248	PSAT1 (ENSMODG00000012960) #19	ENSMODG00000012952 #20	GNAQ (ENSMODG00000012943) #21	GNA14 (ENSMODG00000012932) #22	ENSMODG00000051183	ENSMODG00000012902 #23	ENSMODG00000049650 #23	FOXB2 (ENSMODG00000012804)	PRUNE2 (ENSMODG00000012786)	ANKS6 (ENSMODG00000012769)	GALNT12 (ENSMODG00000012753)	ENSMODG00000029358	ENSMODG00000049269	TGFBR1 (ENSMODG00000012679)	ALG2 (ENSMODG00000040576)	SEC61B (ENSMODG00000012664)	ENSMODG00000044791	ENSMODG00000027487	NR4A3 (ENSMODG00000012660)
Platypus	MODERN SPECIES	88	RMI1 (ENSOANG00000010899) #7	HNRNPK (ENSOANG00000014612) ##8	C9orf64 (ENSOANG00000042188) #9	ENSOANG00000006741 #10	GKAP1 (ENSOANG00000010900) #11	UBQLN1 (ENSOANG00000010928) #12	IDNK (ENSOANG00000037832) #13	FRMD3 (ENSOANG00000036670) #14	RASEF (ENSOANG00000010379) #15	TLE1 (ENSOANG00000020884) #17	TLE4 (ENSOANG00000007857) #18	PSAT1 (ENSOANG00000002968) #19	RPL8 (ENSOANG00000002646)	CEP78 (ENSOANG00000002647) #20	ENSOANG00000002649	GNA14 (ENSOANG00000037680) #22	ENSOANG00000050837	VPS13A (ENSOANG00000003028) #23	ENSOANG00000021049	ENSOANG00000013582	ENSOANG00000005175	ENSOANG00000039000	GCNT1 (ENSOANG00000005174) #24	RFK (ENSOANG00000048082) #25	ENSOANG00000040724 #26	OSTF1 (ENSOANG00000002022) #27	NMRK1 (ENSOANG00000011647) #28	CARNMT1 (ENSOANG00000041557) #29	TRPM6 (ENSOANG00000011650) #31	RORB (ENSOANG00000011655) #32	ANXA1 (ENSOANG00000013140) #33
Sauria	ANCESTRAL SPECIES	5	ENSGT00390000003774.b	ENSGT00390000009358	ENSGT00510000050177	ENSGT00940000154491.c	ENSGT00940000161506	ENSGT00390000014944.b	ENSGT00950000183081.b	ENSGT00390000004215.a.b.b.d	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708 #32
Archosauria	ANCESTRAL SPECIES	31	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Aves	ANCESTRAL SPECIES	4	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487 #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
African ostrich	MODERN SPECIES	163																ENSSCUG00000000555 #22	VPS13A (ENSSCUG00000000477) #23	ENSSCUG00000000445
Neognathae	ANCESTRAL SPECIES	19	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.y #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000161055 #7	ENSGT00940000153434.b.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.y #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.lb.a #25	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT00550000074816.B	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487.y #10	ENSGT00390000008742.b #11	ENSGT00940000156437.i.a #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.lb.a #25	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT01100000263829	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805
Golden eagle	MODERN SPECIES	91	RMI1 (ENSACCG00020013695) #7	ENSACCG00020013718	C9orf64 (ENSACCG00020013750) #9	ENSACCG00020013764 #10	ENSACCG00020013784 #10	GKAP1 (ENSACCG00020013838) #11	UBQLN1 (ENSACCG00020013863) #12	IDNK (ENSACCG00020013880) #13	FRMD3 (ENSACCG00020013964) #14	RASEF (ENSACCG00020014120) #15	TLE1 (ENSACCG00020014335) #17	TLE4 (ENSACCG00020014435) #18	PSAT1 (ENSACCG00020014490) #19	CEP78 (ENSACCG00020014520) #20	GNAQ (ENSACCG00020014556) #21	GNA14 (ENSACCG00020014570) #22	VPS13A (ENSACCG00020015054) #23	FOXB2 (ENSACCG00020015529)	ENSACCG00020015553	ENSACCG00020015582	GCNT1 (ENSACCG00020015597) #24	ENSACCG00020015611 #25	ENTREP1 (ENSACCG00020015643)	APBA1 (ENSACCG00020015667)	PTAR1 (ENSACCG00020015676)	MAMDC2 (ENSACCG00020015741)	ENSACCG00020015799	KLF9 (ENSACCG00020015824)	TRPM3 (ENSACCG00020015843)	ENSACCG00020015870	CEMIP2 (ENSACCG00020015901)
Kakapo	MODERN SPECIES	19	SLC28A3 (ENSSHBG00005020535)	RMI1 (ENSSHBG00005020541) #7	HNRNPK (ENSSHBG00005020544) ##8	C9orf64 (ENSSHBG00005020551) #9	KIF27 (ENSSHBG00005020554) #10	ENSSHBG00005000104 #11	ENSSHBG00005009843 #11	ENSSHBG00005009867 #12	IDNK (ENSSHBG00005009906) #13	FRMD3 (ENSSHBG00005009944) #14	RASEF (ENSSHBG00005009980) #15	TLE1 (ENSSHBG00005010062) #17	TLE4 (ENSSHBG00005010088) #18	PSAT1 (ENSSHBG00005010114) #19	ENSSHBG00005010138 #21	GNA14 (ENSSHBG00005010165) #22	VPS13A (ENSSHBG00005010243) #23	FOXB2 (ENSSHBG00005010328)	ENSSHBG00005010344	ENSSHBG00005010378	GCNT1 (ENSSHBG00005010414) #24	ENSSHBG00005010435 #25	ENTREP1 (ENSSHBG00005010461)	APBA1 (ENSSHBG00005010535)	PTAR1 (ENSSHBG00005010649)	MAMDC2 (ENSSHBG00005010809)	ENSSHBG00005011898	KLF9 (ENSSHBG00005011943)	TRPM3 (ENSSHBG00005012320)	CEMIP2 (ENSSHBG00005014315)	ABHD17B (ENSSHBG00005014339)
Galloanserae	ANCESTRAL SPECIES	18	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.y #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Anatidae	ANCESTRAL SPECIES	12	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487.y #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00530000063335.B.a.b	ENSGT00940000156820.a.a	ENSGT00390000017892	ENSGT00940000156117	ENSGT01100000263829	ENSGT00940000160905	ENSGT00940000157366	ENSGT00940000153636.b	ENSGT00940000157611	ENSGT00440000033805	ENSGT00390000017130
Pink-footed goose	MODERN SPECIES	138									RASEF (ENSABRG00000018279) #15	TLE1 (ENSABRG00000018269) #17	TLE4 (ENSABRG00000018244) #18	PSAT1 (ENSABRG00000018226) #19	CEP78 (ENSABRG00000018217) #20	ENSABRG00000018215	ENSABRG00000018214 #21	GNA14 (ENSABRG00000018151) #22	VPS13A (ENSABRG00000017386) #23
Duck	MODERN SPECIES	4281	HNRNPK (ENSAPLG00000010986) ##8	C9orf64 (ENSAPLG00000020199) #9	ENSAPLG00000030886 #10	GKAP1 (ENSAPLG00000014453) #11	UBQLN1 (ENSAPLG00000014441) #12	IDNK (ENSAPLG00000017965) #13	ENSAPLG00000026639	FRMD3 (ENSAPLG00000014312) #14	RASEF (ENSAPLG00000013969) #15	TLE1 (ENSAPLG00000012402) #17	ENSAPLG00000027958	TLE4 (ENSAPLG00000004314) #18	PSAT1 (ENSAPLG00000005388) #19	CEP78 (ENSAPLG00000005202) #20	GNAQ (ENSAPLG00000005161) #21	GNA14 (ENSAPLG00000004760) #22	VPS13A (ENSAPLG00000005010) #23	FOXB2 (ENSAPLG00000006208)	PRUNE2 (ENSAPLG00000020377)	ENSAPLG00000024975	GCNT1 (ENSAPLG00000025966) #24	RFK (ENSAPLG00000030187) #25	ENTREP1 (ENSAPLG00000008627)	ENSAPLG00000028514	APBA1 (ENSAPLG00000008905)	PTAR1 (ENSAPLG00000009255)	ENSAPLG00000027170	MAMDC2 (ENSAPLG00000009256)	ENSAPLG00000009355	KLF9 (ENSAPLG00000031066)	TRPM3 (ENSAPLG00000009788)
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.y #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.sb #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708.d #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00390000016025.a	ENSGT00940000161055 #7	ENSGT00940000153434.b.a.a ##8	ENSGT00390000002374 #9	ENSGT00940000157487.y #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537.sb #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708.d #32	ENSGT00940000155221 #33	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36	ENSGT00940000156165.k.a #37
Chicken	MODERN SPECIES	131	RMI1 (ENSGALG00010014737) #7	HNRNPK (ENSGALG00010014677) ##8	CZH9orf64 (ENSGALG00010014592) #9	KIF27 (ENSGALG00010014570) #10	GKAP1 (ENSGALG00010014537) #11	UBQLN1 (ENSGALG00010015628) #12	IDNK (ENSGALG00010015621) #13	FRMD3 (ENSGALG00010015589) #14	RASEF (ENSGALG00010015541) #15	ENSGALG00010016632	TLE1 (ENSGALG00010015766) #17	TLE4 (ENSGALG00010015946) #18	PSAT1 (ENSGALG00010015533) #19	CEP78 (ENSGALG00010015894) #20	GNAQ (ENSGALG00010015212) #21	GNA14 (ENSGALG00010015208) #22	VPS13A (ENSGALG00010015181) #23	FOXB2 (ENSGALG00010015144)	ENSGALG00010016898	ENSGALG00010015138	GCNT1 (ENSGALG00010015132) #24	RFK (ENSGALG00010015064) #25	PCSK5 (ENSGALG00010015038) #26	OSTF1 (ENSGALG00010015493) #27	NMRK1 (ENSGALG00010015466) #28	CARNMT1 (ENSGALG00010015413) #29	TRPM6 (ENSGALG00010015320) #31	RORB (ENSGALG00010015250) #32	ANXA1 (ENSGALG00010014114) #33	ALDH1A1 (ENSGALG00010014104) #35	TMC1 (ENSGALG00010015872) #36
Japanese quail	MODERN SPECIES	699	C9orf64 (ENSCJPG00005009409) #9	KIF27 (ENSCJPG00005009390) #10	ENSCJPG00005009388 #11	UBQLN1 (ENSCJPG00005009387) #12	IDNK (ENSCJPG00005009386) #13	FRMD3 (ENSCJPG00005009385) #14	RASEF (ENSCJPG00005009383) #15	ENSCJPG00005009382	ENSCJPG00005009380	TLE1 (ENSCJPG00005009379) #17	TLE4 (ENSCJPG00005009372) #18	ENSCJPG00005009367	PSAT1 (ENSCJPG00005009365) #19	CEP78 (ENSCJPG00005009363) #20	GNAQ (ENSCJPG00005009359) #21	GNA14 (ENSCJPG00005009354) #22	VPS13A (ENSCJPG00005007910) #23	FOXB2 (ENSCJPG00005007899)	PRUNE2 (ENSCJPG00005007885)	GCNT1 (ENSCJPG00005007882) #24	ENSCJPG00005007880 #25	PCSK5 (ENSCJPG00005007863) #26	OSTF1 (ENSCJPG00005007842) #27	NMRK1 (ENSCJPG00005007841) #28	CARNMT1 (ENSCJPG00005007840) #29	ENSCJPG00005007839	TRPM6 (ENSCJPG00005007835) #31	RORB (ENSCJPG00005007829) #32	ANXA1 (ENSCJPG00005007826) #33	ALDH1A1 (ENSCJPG00005007817) #35	TMC1 (ENSCJPG00005007792) #36
Australian saltwater crocodile	MODERN SPECIES	67	SLC28A3 (ENSCPRG00005006926)	RMI1 (ENSCPRG00005006921) #7	HNRNPK (ENSCPRG00005006910) ##8	C9orf64 (ENSCPRG00005006899) #9	KIF27 (ENSCPRG00005006887) #10	GKAP1 (ENSCPRG00005006877) #11	UBQLN1 (ENSCPRG00005006861) #12	IDNK (ENSCPRG00005006853) #13	FRMD3 (ENSCPRG00005006777) #14	RASEF (ENSCPRG00005006676) #15	TLE1 (ENSCPRG00005006631) #17	TLE4 (ENSCPRG00005006614) #18	PSAT1 (ENSCPRG00005006592) #19	CEP78 (ENSCPRG00005006576) #20	GNAQ (ENSCPRG00005006573) #21	GNA14 (ENSCPRG00005006556) #22	VPS13A (ENSCPRG00005006496) #23	PRUNE2 (ENSCPRG00005006454)	GCNT1 (ENSCPRG00005006444) #24	RFK (ENSCPRG00005006442) #25	PCSK5 (ENSCPRG00005006403) #26	ENSCPRG00005006385	OSTF1 (ENSCPRG00005006380) #27	NMRK1 (ENSCPRG00005006370) #28	CARNMT1 (ENSCPRG00005006362) #29	TRPM6 (ENSCPRG00005006349) #31	RORB (ENSCPRG00005006328) #32	ANXA1 (ENSCPRG00005006317) #33	ALDH1A1 (ENSCPRG00005006260) #35	TMC1 (ENSCPRG00005006240) #36	ZFAND5 (ENSCPRG00005006217) #37
Cryptodira	ANCESTRAL SPECIES	48										ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000171049	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00730000110920.b.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.c.a.b	ENSGT01000000214430.c.a.a.a.a	ENSGT01000000214430.c.b.b.b.b.b	ENSGT01000000214430.c.b.a.b.a.b	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000171049	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34
Emydidae	ANCESTRAL SPECIES	20	ENSGT00730000110920.b.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.c.a.b	ENSGT01000000214430.c.a.a.a.a	ENSGT01000000214430.c.b.b.b.b.b	ENSGT01000000214430.c.b.a.b.a.b.d	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000161347 #21	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000189515	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
painted turtle	MODERN SPECIES	705	ENSCPBG00000019022	ENSCPBG00000019023	ENSCPBG00000019024	ENSCPBG00000019027	ENSCPBG00000019028	ENSCPBG00000019030	ENSCPBG00000019034	ENSCPBG00000019035	RASEF (ENSCPBG00000019037) #15	TLE1 (ENSCPBG00000019082) #17	TLE4 (ENSCPBG00000019087) #18	PSAT1 (ENSCPBG00000019096) #19	CEP78 (ENSCPBG00000019104) #20	ENSCPBG00000019108	ENSCPBG00000019109	GNA14 (ENSCPBG00000019112) #22	VPS13A (ENSCPBG00000019204) #23	FOXB2 (ENSCPBG00000019707)	ENSCPBG00000019712	ENSCPBG00000019728	GCNT1 (ENSCPBG00000019732) #24	RFK (ENSCPBG00000019734) #25	ENSCPBG00000019735 #26	PCSK5 (ENSCPBG00000019742) #26	OSTF1 (ENSCPBG00000019756) #27	CARNMT1 (ENSCPBG00000019763) #29	ENSCPBG00000019771	TRPM6 (ENSCPBG00000019827) #31	RORB (ENSCPBG00000020082) #32	ANXA1 (ENSCPBG00000020089) #33	ENSCPBG00000020092 #34
Three-toed box turtle	MODERN SPECIES	50	ENSTMTG00000017693	MLLT3 (ENSTMTG00000017725)	ENSTMTG00000017737	FOCAD (ENSTMTG00000017986)	HACD4 (ENSTMTG00000020159)	ENSTMTG00000020167	ENSTMTG00000020174	RASEF (ENSTMTG00000020204) #15	TLE1 (ENSTMTG00000020394) #17	ENSTMTG00000020413 #18	ENSTMTG00000020432 #18	PSAT1 (ENSTMTG00000020439) #19	ENSTMTG00000020447	CEP78 (ENSTMTG00000020456) #20	GNAQ (ENSTMTG00000020463) #21	GNA14 (ENSTMTG00000020468) #22	VPS13A (ENSTMTG00000020491) #23	FOXB2 (ENSTMTG00000020568)	PRUNE2 (ENSTMTG00000020608)	GCNT1 (ENSTMTG00000020794) #24	RFK (ENSTMTG00000020802) #25	PCSK5 (ENSTMTG00000020815) #26	OSTF1 (ENSTMTG00000020837) #27	NMRK1 (ENSTMTG00000020856) #28	CARNMT1 (ENSTMTG00000020887) #29	ENSTMTG00000020895	TRPM6 (ENSTMTG00000003242) #31	RORB (ENSTMTG00000003307) #32	ANXA1 (ENSTMTG00000003349) #33	ENSTMTG00000003394 #34	ALDH1A1 (ENSTMTG00000003431) #35
Testudinidae	ANCESTRAL SPECIES	15	ENSGT01000000214430.c.b.a.a.a.b	ENSGT01030000234532.B.e.a	ENSGT00940000155903	ENSGT00390000004438	ENSGT00530000062962.b.b	ENSGT01000000214430.c.a.b	ENSGT01000000214430.c.a.a.a.a	ENSGT01000000214430.c.b.b.b.b.b	ENSGT01000000214430.c.b.a.b.a.b	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000171049	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005020719	ENSGEVG00005020720	ENSGEVG00005020725	ENSGEVG00005020726	ENSGEVG00005020731	RASEF (ENSGEVG00005020748) #15	TLE1 (ENSGEVG00005020765) #17	ENSGEVG00005020771	TLE4 (ENSGEVG00005020789) #18	ENSGEVG00005020844	ENSGEVG00005020845	PSAT1 (ENSGEVG00005020848) #19	CEP78 (ENSGEVG00005009089) #20	ENSGEVG00005009209	ENSGEVG00005009240	GNA14 (ENSGEVG00005009271) #22	VPS13A (ENSGEVG00005009336) #23	FOXB2 (ENSGEVG00005009541)	ENSGEVG00005009580	ENSGEVG00005009642	GCNT1 (ENSGEVG00005009784) #24	RFK (ENSGEVG00005009802) #25	ENSGEVG00005009826	PCSK5 (ENSGEVG00005009905) #26	OSTF1 (ENSGEVG00005010236) #27	NMRK1 (ENSGEVG00005010267) #28	CARNMT1 (ENSGEVG00005010329) #29	TRPM6 (ENSGEVG00005010374) #31	RORB (ENSGEVG00005010680) #32	ANXA1 (ENSGEVG00005010829) #33	ENSGEVG00005011063 #34
Abingdon island giant tortoise	MODERN SPECIES	1517													PSAT1 (ENSCABG00000010221) #19	CEP78 (ENSCABG00000010224) #20	ENSCABG00000010234	GNA14 (ENSCABG00000010237) #22	VPS13A (ENSCABG00000010278) #23	FOXB2 (ENSCABG00000012819)	KCTD4 (ENSCABG00000012822)	ENSCABG00000012823
Chinese turtle	MODERN SPECIES	1047													PSAT1 (ENSPSIG00000006099) #19	CEP78 (ENSPSIG00000008337) #20	ENSPSIG00000008891	GNA14 (ENSPSIG00000010004) #22	VPS13A (ENSPSIG00000011081) #23	PRUNE2 (ENSPSIG00000010175)
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00390000009358	ENSGT00510000050177	ENSGT00940000154491.c	ENSGT00940000161506	ENSGT00390000014944.b	ENSGT00950000183081.b	ENSGT00390000004215.a.b.b.d	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00940000165714	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1616													PSAT1 (ENSSPUG00000015619) #19	CEP78 (ENSSPUG00000015513) #20	ENSSPUG00000015482	ENSSPUG00000015475 #22	ENSSPUG00000015465 #22	ENSSPUG00000015458	ENSSPUG00000015383 #23	ENSSPUG00000015353 ##23	ENSSPUG00000015344	ENSSPUG00000015326 #23	ENSSPUG00000015316	FOXB2 (ENSSPUG00000015308)	ENSSPUG00000015301	ENSSPUG00000015265	RFK (ENSSPUG00000015243) #25	PCSK5 (ENSSPUG00000015217) #26	OSTF1 (ENSSPUG00000015197) #27	NMRK1 (ENSSPUG00000015186) #28	CARNMT1 (ENSSPUG00000015140) #29
tuatara	MODERN SPECIES	1616												PSAT1 (ENSSPUG00000015619) #19	CEP78 (ENSSPUG00000015513) #20	ENSSPUG00000015482	ENSSPUG00000015475 #22	ENSSPUG00000015465 #22	ENSSPUG00000015458	ENSSPUG00000015383 #23	ENSSPUG00000015353 ##23	ENSSPUG00000015344	ENSSPUG00000015326 #23	ENSSPUG00000015316	FOXB2 (ENSSPUG00000015308)	ENSSPUG00000015301	ENSSPUG00000015265	RFK (ENSSPUG00000015243) #25	PCSK5 (ENSSPUG00000015217) #26	OSTF1 (ENSSPUG00000015197) #27	NMRK1 (ENSSPUG00000015186) #28	CARNMT1 (ENSSPUG00000015140) #29	TRPM6 (ENSSPUG00000014760) #31
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487.eb #10	ENSGT00940000157487.db #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000190269	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487.eb #10	ENSGT00940000157487.db #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000190269	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Common wall lizard	MODERN SPECIES	2	ENSPMRG00000016853 #13	ENSPMRG00000016858 #14	ENSPMRG00000016869	RASEF (ENSPMRG00000016876) #15	TLE1 (ENSPMRG00000016889) #17	ENSPMRG00000016913	TLE4 (ENSPMRG00000016921) #18	ENSPMRG00000016938	ENSPMRG00000016946	ENSPMRG00000016950	PSAT1 (ENSPMRG00000016957) #19	CEP78 (ENSPMRG00000016965) #20	ENSPMRG00000016976	ENSPMRG00000009861	ENSPMRG00000009954	GNA14 (ENSPMRG00000010242) #22	VPS13A (ENSPMRG00000010569) #23	ENSPMRG00000011850	FOXB2 (ENSPMRG00000011853)	ENSPMRG00000011855	ENSPMRG00000011866	GCNT1 (ENSPMRG00000011872) #24	RFK (ENSPMRG00000011873) #25	PCSK5 (ENSPMRG00000011949) #26	ENSPMRG00000012583	OSTF1 (ENSPMRG00000012586) #27	NMRK1 (ENSPMRG00000012589) #28	CARNMT1 (ENSPMRG00000012594) #29	ENSPMRG00000012598	TRPM6 (ENSPMRG00000012803) #31	RORB (ENSPMRG00000014404) #32
Argentine black and white tegu	MODERN SPECIES	25	C9orf64 (ENSSMRG00000019175) #9	KIF27 (ENSSMRG00000019173) #10	GKAP1 (ENSSMRG00000019172) #11	UBQLN1 (ENSSMRG00000019171) #12	IDNK (ENSSMRG00000019170) #13	ENSSMRG00000019169	FRMD3 (ENSSMRG00000019168) #14	ENSSMRG00000019167	RASEF (ENSSMRG00000019166) #15	TLE1 (ENSSMRG00000019001) #17	ENSSMRG00000018997	TLE4 (ENSSMRG00000018996) #18	PSAT1 (ENSSMRG00000018994) #19	CEP78 (ENSSMRG00000018993) #20	ENSSMRG00000018991	GNA14 (ENSSMRG00000018990) #22	VPS13A (ENSSMRG00000018987) #23	FOXB2 (ENSSMRG00000018986)	ENSSMRG00000018985	ENSSMRG00000018983	GCNT1 (ENSSMRG00000018982) #24	RFK (ENSSMRG00000018980) #25	ENSSMRG00000018979 #26	PCSK5 (ENSSMRG00000018978) #26	OSTF1 (ENSSMRG00000018977) #27	NMRK1 (ENSSMRG00000018976) #28	CARNMT1 (ENSSMRG00000018975) #29	ENSSMRG00000018974	TRPM6 (ENSSMRG00000018973) #31	RORB (ENSSMRG00000018972) #32	ENSSMRG00000018962 #33
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487.eb #10	ENSGT00940000157487.db #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b #23	ENSGT00940000161970.ab	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000190269	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487.eb #10	ENSGT00940000157487.db #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b.l.a #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.t #23	ENSGT00940000161970.`b	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00960000190269	ENSGT00940000158164 #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487.eb #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00390000009358	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b.l.a #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.t #23	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164.c #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36	ENSGT00940000156165 #37
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00940000161055 #7	ENSGT00940000153434.b ##8	ENSGT00390000002374 #9	ENSGT00940000157487.eb #10	ENSGT00390000008742 #11	ENSGT00940000156437.i #12	ENSGT00390000003364 #13	ENSGT00940000158577 #14	ENSGT00390000009358	ENSGT00940000159488 #15	ENSGT01030000234519.e.a.a.a.a.a #17	ENSGT01030000234519.e.a.a.a.a.b.l.a #18	ENSGT00940000153241.A #19	ENSGT00390000013287 #20	ENSGT00940000162569.b	ENSGT00940000158510 #22	ENSGT00950000183083.a.d.b.t #23	ENSGT00940000154422	ENSGT00940000161348 #24	ENSGT00390000015537 #25	ENSGT00940000155770 #26	ENSGT00920000149159 #27	ENSGT00940000159384 #28	ENSGT00390000005323 #29	ENSGT00940000158164.c #31	ENSGT00940000157708 #32	ENSGT00940000155221 #33	ENSGT00950000183037.A.b #34	ENSGT00940000154609 #35	ENSGT01050000244942.b.a.a #36	ENSGT00940000156165 #37
Mainland tiger snake	MODERN SPECIES	1	HNRNPK (ENSNSUG00000014458) ##8	C9orf64 (ENSNSUG00000014459) #9	ENSNSUG00000014460 #10	ENSNSUG00000014461 #10	GKAP1 (ENSNSUG00000014462) #11	UBQLN1 (ENSNSUG00000014464) #12	IDNK (ENSNSUG00000014976) #13	FRMD3 (ENSNSUG00000014978) #14	ENSNSUG00000014980	TLE1 (ENSNSUG00000014982) #17	TLE4 (ENSNSUG00000014992) #18	PSAT1 (ENSNSUG00000017692) #19	CEP78 (ENSNSUG00000017693) #20	ENSNSUG00000017694	ENSNSUG00000017695	GNA14 (ENSNSUG00000017696) #22	VPS13A (ENSNSUG00000017697) #23	ENSNSUG00000017700	ENSNSUG00000017711	GCNT1 (ENSNSUG00000017727) #24	PCSK5 (ENSNSUG00000017728) #26	OSTF1 (ENSNSUG00000017729) #27	NMRK1 (ENSNSUG00000017730) #28	CARNMT1 (ENSNSUG00000017731) #29	ENSNSUG00000017732	ENSNSUG00000017733 #31	ENSNSUG00000017734 #31	RORB (ENSNSUG00000017735) #32	ANXA1 (ENSNSUG00000017744) #33	ENSNSUG00000017745	ENSNSUG00000017746 #34
Eastern brown snake	MODERN SPECIES	23	HNRNPK (ENSPTXG00000011080) ##8	C9orf64 (ENSPTXG00000011079) #9	ENSPTXG00000011078 #10	ENSPTXG00000011076 #10	GKAP1 (ENSPTXG00000011073) #11	UBQLN1 (ENSPTXG00000011070) #12	IDNK (ENSPTXG00000011068) #13	FRMD3 (ENSPTXG00000011050) #14	ENSPTXG00000011048	RASEF (ENSPTXG00000011044) #15	TLE1 (ENSPTXG00000011035) #17	TLE4 (ENSPTXG00000011028) #18	PSAT1 (ENSPTXG00000011024) #19	CEP78 (ENSPTXG00000011019) #20	ENSPTXG00000011016	GNA14 (ENSPTXG00000011015) #22	VPS13A (ENSPTXG00000005943) #23	ENSPTXG00000005941	ENSPTXG00000005940	GCNT1 (ENSPTXG00000005939) #24	RFK (ENSPTXG00000005938) #25	PCSK5 (ENSPTXG00000005937) #26	OSTF1 (ENSPTXG00000005936) #27	NMRK1 (ENSPTXG00000005935) #28	CARNMT1 (ENSPTXG00000005934) #29	TRPM6 (ENSPTXG00000005920) #31	RORB (ENSPTXG00000005917) #32	ANXA1 (ENSPTXG00000005230) #33	ENSPTXG00000005171 #34	ALDH1A1 (ENSPTXG00000005166) #35	ENSPTXG00000005164 #36
Blue-lipped sea krait	MODERN SPECIES	3065																GNA14 (ENSLLTG00000015410) #22
Indian cobra	MODERN SPECIES	1	ENSNNAG00000016807 #9	ENSNNAG00000016804 #10	ENSNNAG00000016791 #10	ENSNNAG00000016758 #10	GKAP1 (ENSNNAG00000016726) #11	UBQLN1 (ENSNNAG00000016716) #12	IDNK (ENSNNAG00000016714) #13	FRMD3 (ENSNNAG00000016655) #14	RASEF (ENSNNAG00000016547) #15	TLE1 (ENSNNAG00000016494) #17	ENSNNAG00000016142 #18	PSAT1 (ENSNNAG00000016080) #19	ENSNNAG00000016066 #20	ENSNNAG00000016060 #20	ENSNNAG00000016049	GNA14 (ENSNNAG00000016037) #22	VPS13A (ENSNNAG00000011477) #23	FOXB2 (ENSNNAG00000011034)	ENSNNAG00000011008	ENSNNAG00000010952	GCNT1 (ENSNNAG00000010933) #24	RFK (ENSNNAG00000010914) #25	PCSK5 (ENSNNAG00000008993) #26	OSTF1 (ENSNNAG00000008798) #27	NMRK1 (ENSNNAG00000008740) #28	CARNMT1 (ENSNNAG00000008718) #29	TRPM6 (ENSNNAG00000008269) #31	RORB (ENSNNAG00000008087) #32	ANXA1 (ENSNNAG00000007974) #33	ENSNNAG00000007480 #34	ALDH1A1 (ENSNNAG00000007407) #35
Lizard	MODERN SPECIES	1	KIF27 (ENSACAG00000001735) #10	ENSACAG00000040829	GKAP1 (ENSACAG00000001835) #11	ENSACAG00000042248	UBQLN1 (ENSACAG00000001880) #12	IDNK (ENSACAG00000002000) #13	FRMD3 (ENSACAG00000002032) #14	ENSACAG00000041514	RASEF (ENSACAG00000002155) #15	TLE1 (ENSACAG00000002262) #17	TLE4 (ENSACAG00000002789) #18	ENSACAG00000044927	ENSACAG00000025462	PSAT1 (ENSACAG00000006074) #19	ENSACAG00000005913	GNA14 (ENSACAG00000028039) #22	VPS13A (ENSACAG00000005655) #23	FOXB2 (ENSACAG00000023403)	ENSACAG00000034707	PRUNE2 (ENSACAG00000005636)	GCNT1 (ENSACAG00000005572) #24	RFK (ENSACAG00000040387) #25	PCSK5 (ENSACAG00000005525) #26	ENSACAG00000041724	OSTF1 (ENSACAG00000005379) #27	NMRK1 (ENSACAG00000005328) #28	CARNMT1 (ENSACAG00000029442) #29	TRPM6 (ENSACAG00000005230) #31	RORB (ENSACAG00000005205) #32	ENSACAG00000038724	ANXA1 (ENSACAG00000011929) #33