Amniota ANCESTRAL SPECIES 23 ENSGT00940000158590 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.d ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000154779.a.a Mammalia ANCESTRAL SPECIES 61 ENSGT00940000163280 ENSGT00940000158590 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.d ENSGT00940000162613 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Theria ANCESTRAL SPECIES 41 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Eutheria ANCESTRAL SPECIES 24 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Boreoeutheria ANCESTRAL SPECIES 18 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Euarchontoglires ANCESTRAL SPECIES 18 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Primates ANCESTRAL SPECIES 18 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Haplorrhini ANCESTRAL SPECIES 14 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Simiiformes ANCESTRAL SPECIES 13 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Catarrhini ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00910000147504 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Hominoidea ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00910000147504 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Hominidae ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033.c #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00910000147504 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033.c.a #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Homo/Pan group ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033.c.a #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Pan ANCESTRAL SPECIES 14 ENSGT00940000162830 #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033.c.a #11 ENSGT00940000161736 #12 ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Bonobo MODERN SPECIES 10 ZNF77 (ENSPPAG00000031195) #7 TLE6 (ENSPPAG00000029714) #8 ENSPPAG00000038446 #9 ENSPPAG00000007067 #10 GNA11 (ENSPPAG00000038754) #11 GNA15 (ENSPPAG00000041303) #12 NCLN (ENSPPAG00000043465) #13 ENSPPAG00000029786 #14 NFIC (ENSPPAG00000036536) #15 SMIM24 (ENSPPAG00000041504) #16 SMIM44 (ENSPPAG00000032436) #17 DOHH (ENSPPAG00000004289) #18 FZR1 (ENSPPAG00000043553) #19 TEKTIP1 (ENSPPAG00000035424) #20 MFSD12 (ENSPPAG00000040119) #21 HMG20B (ENSPPAG00000042698) #22 GIPC3 (ENSPPAG00000005107) #23 TBXA2R (ENSPPAG00000033099) #24 CACTIN (ENSPPAG00000028205) #25 PIP5K1C (ENSPPAG00000029984) #26 TJP3 (ENSPPAG00000040704) #27 APBA3 (ENSPPAG00000026188) #28 MRPL54 (ENSPPAG00000042418) #29 RAX2 (ENSPPAG00000039142) #30 MATK (ENSPPAG00000008704) #31 ZFR2 (ENSPPAG00000031541) #32 ATCAY (ENSPPAG00000041506) #33 ENSPPAG00000043971 #34 ENSPPAG00000043330 #35 DAPK3 (ENSPPAG00000029008) #36 EEF2 (ENSPPAG00000042319) #37 Chimpanzee MODERN SPECIES 10 TLE6 (ENSPTRG00000010250) #8 TLE2 (ENSPTRG00000010252) #9 ENSPTRG00000043065 ##10 TLE5 (ENSPTRG00000010253) #10 GNA11 (ENSPTRG00000010254) #11 GNA15 (ENSPTRG00000010256) #12 NCLN (ENSPTRG00000010258) #13 CELF5 (ENSPTRG00000010259) NFIC (ENSPTRG00000010261) #15 SMIM24 (ENSPTRG00000049658) #16 SMIM44 (ENSPTRG00000050433) #17 DOHH (ENSPTRG00000010263) #18 FZR1 (ENSPTRG00000010264) #19 TEKTIP1 (ENSPTRG00000010265) #20 MFSD12 (ENSPTRG00000010267) #21 HMG20B (ENSPTRG00000010268) #22 GIPC3 (ENSPTRG00000010269) #23 TBXA2R (ENSPTRG00000050832) #24 CACTIN (ENSPTRG00000010272) #25 PIP5K1C (ENSPTRG00000010273) #26 TJP3 (ENSPTRG00000010274) #27 APBA3 (ENSPTRG00000010275) #28 MRPL54 (ENSPTRG00000010276) #29 RAX2 (ENSPTRG00000010277) #30 MATK (ENSPTRG00000010278) #31 ZFR2 (ENSPTRG00000010279) #32 ATCAY (ENSPTRG00000023462) #33 ENSPTRG00000045925 #34 DAPK3 (ENSPTRG00000010286) #36 EEF2 (ENSPTRG00000010288) #37 PIAS4 (ENSPTRG00000010290) Human MODERN SPECIES 10 TLE6 (ENSG00000104953) #8 TLE2 (ENSG00000065717) #9 TLE5 (ENSG00000104964) #10 GNA11 (ENSG00000088256) #11 GNA15 (ENSG00000060558) #12 S1PR4 (ENSG00000125910) NCLN (ENSG00000125912) #13 CELF5 (ENSG00000161082) NFIC (ENSG00000141905) #15 SMIM24 (ENSG00000095932) #16 SMIM44 (ENSG00000284638) #17 DOHH (ENSG00000129932) #18 FZR1 (ENSG00000105325) #19 MFSD12 (ENSG00000161091) #21 TEKTIP1 (ENSG00000183397) #20 HMG20B (ENSG00000064961) #22 GIPC3 (ENSG00000179855) #23 TBXA2R (ENSG00000006638) #24 CACTIN (ENSG00000105298) #25 PIP5K1C (ENSG00000186111) #26 TJP3 (ENSG00000105289) #27 APBA3 (ENSG00000011132) #28 MRPL54 (ENSG00000183617) #29 RAX2 (ENSG00000173976) #30 MATK (ENSG00000007264) #31 ZFR2 (ENSG00000105278) #32 ATCAY (ENSG00000167654) #33 NMRK2 (ENSG00000077009) #35 DAPK3 (ENSG00000167657) #36 EEF2 (ENSG00000167658) #37 PIAS4 (ENSG00000105229) Gorilla MODERN SPECIES 10 TLE6 (ENSGGOG00000014760) #8 TLE2 (ENSGGOG00000014765) #9 ENSGGOG00000010731 #10 GNA11 (ENSGGOG00000014995) #11 ENSGGOG00000040253 GNA15 (ENSGGOG00000003077) #12 NCLN (ENSGGOG00000010398) #13 ENSGGOG00000041211 #14 NFIC (ENSGGOG00000006557) #15 ENSGGOG00000038229 SMIM44 (ENSGGOG00000036474) #17 ENSGGOG00000011214 #18 FZR1 (ENSGGOG00000002200) #19 TEKTIP1 (ENSGGOG00000002202) #20 MFSD12 (ENSGGOG00000002205) #21 HMG20B (ENSGGOG00000014805) #22 GIPC3 (ENSGGOG00000027202) #23 TBXA2R (ENSGGOG00000013761) #24 CACTIN (ENSGGOG00000012532) #25 PIP5K1C (ENSGGOG00000012543) #26 TJP3 (ENSGGOG00000004626) #27 APBA3 (ENSGGOG00000004637) #28 MRPL54 (ENSGGOG00000014722) #29 RAX2 (ENSGGOG00000014727) #30 MATK (ENSGGOG00000014700) #31 ZFR2 (ENSGGOG00000002866) #32 ATCAY (ENSGGOG00000006826) #33 ENSGGOG00000038336 #34 NMRK2 (ENSGGOG00000004857) #35 DAPK3 (ENSGGOG00000002018) #36 EEF2 (ENSGGOG00000012869) #37 Orangutan MODERN SPECIES 10 TLE2 (ENSPPYG00000009363) #9 ENSPPYG00000009364 #10 GNA11 (ENSPPYG00000009366) #11 GNA15 (ENSPPYG00000009367) #12 S1PR4 (ENSPPYG00000009368) NCLN (ENSPPYG00000009369) #13 CELF5 (ENSPPYG00000009370) NFIC (ENSPPYG00000009371) #15 ENSPPYG00000032854 #16 SMIM44 (ENSPPYG00000009372) #17 DOHH (ENSPPYG00000009373) #18 FZR1 (ENSPPYG00000009374) #19 TEKTIP1 (ENSPPYG00000009376) #20 ENSPPYG00000034014 MFSD12 (ENSPPYG00000009377) #21 HMG20B (ENSPPYG00000009378) #22 GIPC3 (ENSPPYG00000009379) #23 TBXA2R (ENSPPYG00000009381) #24 CACTIN (ENSPPYG00000009382) #25 PIP5K1C (ENSPPYG00000009383) #26 TJP3 (ENSPPYG00000009384) #27 APBA3 (ENSPPYG00000009385) #28 MRPL54 (ENSPPYG00000040130) #29 RAX2 (ENSPPYG00000009387) #30 MATK (ENSPPYG00000009388) #31 ZFR2 (ENSPPYG00000009389) #32 ATCAY (ENSPPYG00000009390) #33 NMRK2 (ENSPPYG00000009391) #35 DAPK3 (ENSPPYG00000009392) #36 EEF2 (ENSPPYG00000009393) #37 PIAS4 (ENSPPYG00000009394) Cercopithecidae ANCESTRAL SPECIES 17 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00910000147504 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00910000147666 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Cercopithecinae ANCESTRAL SPECIES 1 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00910000147504 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00910000147666 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00910000147504 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b.a.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00910000147666 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Macaca ANCESTRAL SPECIES 24 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b.a.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662.gb.a #37 Pig-tailed macaque MODERN SPECIES 76 TLE6 (ENSMNEG00000032520) #8 TLE2 (ENSMNEG00000036907) #9 TLE5 (ENSMNEG00000013087) #10 GNA11 (ENSMNEG00000045417) #11 GNA15 (ENSMNEG00000041090) #12 S1PR4 (ENSMNEG00000020638) NCLN (ENSMNEG00000036405) #13 ENSMNEG00000001853 #14 NFIC (ENSMNEG00000042199) #15 SMIM24 (ENSMNEG00000038502) #16 SMIM44 (ENSMNEG00000032843) #17 DOHH (ENSMNEG00000040585) #18 FZR1 (ENSMNEG00000028728) #19 TEKTIP1 (ENSMNEG00000031534) #20 MFSD12 (ENSMNEG00000036659) #21 HMG20B (ENSMNEG00000037721) #22 GIPC3 (ENSMNEG00000033247) #23 TBXA2R (ENSMNEG00000029210) #24 CACTIN (ENSMNEG00000038257) #25 PIP5K1C (ENSMNEG00000023721) #26 TJP3 (ENSMNEG00000029063) #27 APBA3 (ENSMNEG00000028714) #28 MRPL54 (ENSMNEG00000039499) #29 RAX2 (ENSMNEG00000034075) #30 MATK (ENSMNEG00000042873) #31 ZFR2 (ENSMNEG00000043770) #32 ATCAY (ENSMNEG00000027990) #33 ENSMNEG00000016763 ENSMNEG00000018044 #34 NMRK2 (ENSMNEG00000033367) #35 DAPK3 (ENSMNEG00000034480) #36 Macaca_a ANCESTRAL SPECIES 1 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00950000182916.a.a #15 ENSGT00950000185200 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 ENSGT00940000154662.gb.a #37 ENSGT01030000234539.a.a.a Rhesus MODERN SPECIES 10 ENSMMUG00000050313 GNA11 (ENSMMUG00000002961) #11 GNA15 (ENSMMUG00000047845) #12 NCLN (ENSMMUG00000017036) #13 CELF5 (ENSMMUG00000015513) #14 ENSMMUG00000060497 NFIC (ENSMMUG00000003439) #15 ENSMMUG00000057142 ENSMMUG00000050017 SMIM24 (ENSMMUG00000010560) #16 SMIM44 (ENSMMUG00000059495) #17 DOHH (ENSMMUG00000057146) #18 FZR1 (ENSMMUG00000019870) #19 TEKTIP1 (ENSMMUG00000039983) #20 MFSD12 (ENSMMUG00000010653) #21 HMG20B (ENSMMUG00000018096) #22 GIPC3 (ENSMMUG00000011402) #23 TBXA2R (ENSMMUG00000011403) #24 CACTIN (ENSMMUG00000028931) #25 PIP5K1C (ENSMMUG00000008137) #26 TJP3 (ENSMMUG00000028930) #27 APBA3 (ENSMMUG00000009672) #28 MRPL54 (ENSMMUG00000044080) #29 RAX2 (ENSMMUG00000056802) #30 MATK (ENSMMUG00000001917) #31 ZFR2 (ENSMMUG00000054579) #32 ATCAY (ENSMMUG00000039195) #33 ENSMMUG00000064233 #34 ENSMMUG00000056147 NMRK2 (ENSMMUG00000015273) #35 DAPK3 (ENSMMUG00000022765) Cercopithecinae_b ANCESTRAL SPECIES 13 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00910000147504 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00910000148398 ENSGT00390000003420.b.a.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00910000147666 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 Cercopithecinae_d ANCESTRAL SPECIES 22 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00910000147504 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00910000148398 ENSGT00390000003420.b.a.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00910000147666 ENSGT00940000158364 #33 ENSGT00910000147218 #34 ENSGT00940000159842 #35 Sooty mangabey MODERN SPECIES 177 TLE6 (ENSCATG00000041256) #8 TLE2 (ENSCATG00000035147) #9 TLE5 (ENSCATG00000040517) #10 GNA11 (ENSCATG00000038504) #11 GNA15 (ENSCATG00000044954) #12 S1PR4 (ENSCATG00000017923) NCLN (ENSCATG00000044668) #13 ENSCATG00000044494 #14 NFIC (ENSCATG00000037966) #15 SMIM24 (ENSCATG00000037417) #16 SMIM44 (ENSCATG00000030734) #17 DOHH (ENSCATG00000033001) #18 FZR1 (ENSCATG00000044993) #19 TEKTIP1 (ENSCATG00000044766) #20 MFSD12 (ENSCATG00000045111) #21 HMG20B (ENSCATG00000034700) #22 GIPC3 (ENSCATG00000041662) #23 TBXA2R (ENSCATG00000037254) #24 CACTIN (ENSCATG00000042320) #25 PIP5K1C (ENSCATG00000033912) #26 TJP3 (ENSCATG00000038428) #27 APBA3 (ENSCATG00000040664) #28 MRPL54 (ENSCATG00000014066) #29 RAX2 (ENSCATG00000038515) #30 MATK (ENSCATG00000037452) #31 ZFR2 (ENSCATG00000028559) #32 ENSCATG00000024725 ATCAY (ENSCATG00000038400) #33 ENSCATG00000034164 #34 NMRK2 (ENSCATG00000039387) #35 DAPK3 (ENSCATG00000041841) #36 Vervet Monkey MODERN SPECIES 25 ZNF57 (ENSCSAG00000011445) ZNF77 (ENSCSAG00000011439) #7 TLE6 (ENSCSAG00000011416) #8 TLE2 (ENSCSAG00000011330) #9 GNA11 (ENSCSAG00000011235) #11 GNA15 (ENSCSAG00000011230) #12 S1PR4 (ENSCSAG00000018815) NCLN (ENSCSAG00000011222) #13 CELF5 (ENSCSAG00000011210) NFIC (ENSCSAG00000011182) #15 SMIM24 (ENSCSAG00000011179) #16 DOHH (ENSCSAG00000011169) #18 FZR1 (ENSCSAG00000011164) #19 TEKTIP1 (ENSCSAG00000011154) #20 MFSD12 (ENSCSAG00000011148) #21 HMG20B (ENSCSAG00000011140) #22 GIPC3 (ENSCSAG00000011131) #23 TBXA2R (ENSCSAG00000011119) #24 CACTIN (ENSCSAG00000011116) #25 PIP5K1C (ENSCSAG00000011108) #26 TJP3 (ENSCSAG00000011066) #27 APBA3 (ENSCSAG00000010973) #28 MRPL54 (ENSCSAG00000010950) #29 RAX2 (ENSCSAG00000010944) #30 MATK (ENSCSAG00000010938) #31 ZFR2 (ENSCSAG00000010914) #32 ATCAY (ENSCSAG00000010889) #33 NMRK2 (ENSCSAG00000010882) #35 DAPK3 (ENSCSAG00000010873) #36 EEF2 (ENSCSAG00000010865) #37 PIAS4 (ENSCSAG00000010838) Rhinopithecus ANCESTRAL SPECIES 5 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00910000147666 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Golden snub-nosed monkey MODERN SPECIES 1318 ZNF77 (ENSRROG00000028828) #7 TLE6 (ENSRROG00000018085) #8 TLE2 (ENSRROG00000033121) #9 TLE5 (ENSRROG00000038789) #10 GNA11 (ENSRROG00000032415) #11 GNA15 (ENSRROG00000035571) #12 NCLN (ENSRROG00000028611) #13 CELF5 (ENSRROG00000032625) NFIC (ENSRROG00000044677) #15 SMIM24 (ENSRROG00000032951) #16 SMIM44 (ENSRROG00000030107) #17 DOHH (ENSRROG00000043930) #18 FZR1 (ENSRROG00000036142) #19 TEKTIP1 (ENSRROG00000042406) #20 MFSD12 (ENSRROG00000038465) #21 HMG20B (ENSRROG00000012256) #22 ENSRROG00000044154 GIPC3 (ENSRROG00000031972) #23 TBXA2R (ENSRROG00000044222) #24 CACTIN (ENSRROG00000032395) #25 PIP5K1C (ENSRROG00000032134) #26 TJP3 (ENSRROG00000024434) #27 APBA3 (ENSRROG00000033516) #28 MRPL54 (ENSRROG00000018776) #29 RAX2 (ENSRROG00000029798) #30 MATK (ENSRROG00000038991) #31 ENSRROG00000031786 ZFR2 (ENSRROG00000039340) #32 ATCAY (ENSRROG00000042086) #33 NMRK2 (ENSRROG00000044574) #35 DAPK3 (ENSRROG00000045681) #36 Black snub-nosed monkey MODERN SPECIES 1375 ZNF77 (ENSRBIG00000029867) #7 TLE6 (ENSRBIG00000039750) #8 TLE2 (ENSRBIG00000028459) #9 TLE5 (ENSRBIG00000001610) #10 GNA11 (ENSRBIG00000020274) #11 GNA15 (ENSRBIG00000036769) #12 NCLN (ENSRBIG00000040050) #13 ENSRBIG00000038502 NFIC (ENSRBIG00000040502) #15 SMIM24 (ENSRBIG00000033962) #16 SMIM44 (ENSRBIG00000033666) #17 DOHH (ENSRBIG00000039236) #18 FZR1 (ENSRBIG00000040539) #19 TEKTIP1 (ENSRBIG00000028614) #20 MFSD12 (ENSRBIG00000017416) #21 HMG20B (ENSRBIG00000041734) #22 GIPC3 (ENSRBIG00000038552) #23 TBXA2R (ENSRBIG00000036411) #24 CACTIN (ENSRBIG00000006919) #25 TTC7A (ENSRBIG00000043771) STPG4 (ENSRBIG00000014563) ENSRBIG00000033764 EPCAM (ENSRBIG00000042447) MSH2 (ENSRBIG00000031403) KCNK12 (ENSRBIG00000036058) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000161213.t #22 Cebidae ANCESTRAL SPECIES ENSGT00940000161213.t #22 Cebidae_a ANCESTRAL SPECIES ENSGT00940000161213.t #22 Bolivian squirrel monkey MODERN SPECIES 150 TLE6 (ENSSBOG00000034568) #8 TLE2 (ENSSBOG00000029407) #9 TLE5 (ENSSBOG00000022171) #10 ENSSBOG00000011100 GNA11 (ENSSBOG00000017439) #11 GNA15 (ENSSBOG00000031168) #12 NCLN (ENSSBOG00000027521) #13 ENSSBOG00000036241 NFIC (ENSSBOG00000031869) #15 SMIM24 (ENSSBOG00000019949) #16 SMIM44 (ENSSBOG00000025422) #17 DOHH (ENSSBOG00000021498) #18 FZR1 (ENSSBOG00000023681) #19 TEKTIP1 (ENSSBOG00000020851) #20 MFSD12 (ENSSBOG00000022502) #21 HMG20B (ENSSBOG00000034086) #22 GIPC3 (ENSSBOG00000021391) #23 CACTIN (ENSSBOG00000034076) #25 PIP5K1C (ENSSBOG00000027787) #26 TJP3 (ENSSBOG00000035488) #27 APBA3 (ENSSBOG00000030975) #28 MRPL54 (ENSSBOG00000028081) #29 MATK (ENSSBOG00000030884) #31 ATCAY (ENSSBOG00000031021) #33 NMRK2 (ENSSBOG00000016720) #35 DAPK3 (ENSSBOG00000032686) #36 ENSSBOG00000006731 #37 PIAS4 (ENSSBOG00000028685) ZBTB7A (ENSSBOG00000015331) MAP2K2 (ENSSBOG00000033682) CREB3L3 (ENSSBOG00000022378) Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 16 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213.u.a #22 ENSGT00940000161213.u.b #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Cebidae ANCESTRAL SPECIES 20 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213.u.a #22 ENSGT00940000161213.u.b #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Cebidae_a ANCESTRAL SPECIES 9 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213.u.a #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Capuchin MODERN SPECIES 375 TLE2 (ENSCCAG00000031140) #9 TLE5 (ENSCCAG00000037181) #10 GNA11 (ENSCCAG00000022709) #11 GNA15 (ENSCCAG00000028488) #12 S1PR4 (ENSCCAG00000019353) NCLN (ENSCCAG00000034927) #13 ENSCCAG00000028950 NFIC (ENSCCAG00000035238) #15 SMIM24 (ENSCCAG00000032618) #16 SMIM44 (ENSCCAG00000024174) #17 DOHH (ENSCCAG00000018512) #18 ENSCCAG00000025603 FZR1 (ENSCCAG00000031294) #19 C19orf71 (ENSCCAG00000028895) #20 MFSD12 (ENSCCAG00000021716) #21 HMG20B (ENSCCAG00000020130) #22 GIPC3 (ENSCCAG00000035399) #23 TBXA2R (ENSCCAG00000028722) #24 CACTIN (ENSCCAG00000028723) #25 PIP5K1C (ENSCCAG00000019560) #26 TJP3 (ENSCCAG00000020120) #27 APBA3 (ENSCCAG00000033704) #28 MRPL54 (ENSCCAG00000000138) #29 RAX2 (ENSCCAG00000027035) #30 MATK (ENSCCAG00000027658) #31 ZFR2 (ENSCCAG00000025541) #32 ATCAY (ENSCCAG00000030577) #33 NMRK2 (ENSCCAG00000027666) #35 DAPK3 (ENSCCAG00000036778) #36 EEF2 (ENSCCAG00000034379) #37 PIAS4 (ENSCCAG00000031276) Marmoset MODERN SPECIES KIF27 (ENSCJAG00000003691) ENSCJAG00000082402 ENSCJAG00000073805 GKAP1 (ENSCJAG00000003667) ENSCJAG00000082929 UBQLN1 (ENSCJAG00000003609) IDNK (ENSCJAG00000042371) FRMD3 (ENSCJAG00000003554) ENSCJAG00000076320 RASEF (ENSCJAG00000003547) ENSCJAG00000069566 ENSCJAG00000003536 ENSCJAG00000079730 ENSCJAG00000076267 ENSCJAG00000059562 ENSCJAG00000071167 #22 ENSCJAG00000083316 TLE1 (ENSCJAG00000003424) ##10 ENSCJAG00000072614 ENSCJAG00000083224 TLE4 (ENSCJAG00000003336) ##10 ENSCJAG00000084238 ENSCJAG00000052461 PSAT1 (ENSCJAG00000003319) CEP78 (ENSCJAG00000003289) ENSCJAG00000042365 GNAQ (ENSCJAG00000003268) ENSCJAG00000003266 ENSCJAG00000072998 ENSCJAG00000084872 ENSCJAG00000054232 Mas night monkey MODERN SPECIES 937 ZNF77 (ENSANAG00000012552) #7 TLE6 (ENSANAG00000025865) #8 TLE2 (ENSANAG00000028611) #9 GNA11 (ENSANAG00000033019) #11 GNA15 (ENSANAG00000029456) #12 S1PR4 (ENSANAG00000010374) NCLN (ENSANAG00000036906) #13 CELF5 (ENSANAG00000024549) NFIC (ENSANAG00000036415) #15 ENSANAG00000027655 SMIM44 (ENSANAG00000014595) #17 DOHH (ENSANAG00000036531) #18 FZR1 (ENSANAG00000028463) #19 TEKTIP1 (ENSANAG00000033612) #20 MFSD12 (ENSANAG00000037281) #21 HMG20B (ENSANAG00000020667) #22 TBXA2R (ENSANAG00000009361) #24 CACTIN (ENSANAG00000034680) #25 PIP5K1C (ENSANAG00000036860) #26 TJP3 (ENSANAG00000028837) #27 APBA3 (ENSANAG00000034636) #28 MRPL54 (ENSANAG00000028692) #29 RAX2 (ENSANAG00000029699) #30 MATK (ENSANAG00000036207) #31 ZFR2 (ENSANAG00000028699) #32 ATCAY (ENSANAG00000029633) #33 ENSANAG00000037878 #35 DAPK3 (ENSANAG00000029830) #36 EEF2 (ENSANAG00000037323) #37 PIAS4 (ENSANAG00000023065) ZBTB7A (ENSANAG00000022927) Platyrrhini ANCESTRAL SPECIES 16 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213.u.a #22 ENSGT00940000161213.u.b #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Cebidae ANCESTRAL SPECIES 20 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213.u.a #22 ENSGT00940000161213.u.b #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Marmoset MODERN SPECIES 14 ZNF77 (ENSCJAG00000003471) #7 ENSCJAG00000073229 TLE6 (ENSCJAG00000018653) #8 TLE2 (ENSCJAG00000018666) #9 ENSCJAG00000016149 #10 GNA11 (ENSCJAG00000016160) #11 GNA15 (ENSCJAG00000040313) #12 CELF5 (ENSCJAG00000039430) ENSCJAG00000080745 SMIM24 (ENSCJAG00000069968) #16 SMIM44 (ENSCJAG00000039325) #17 DOHH (ENSCJAG00000014871) #18 FZR1 (ENSCJAG00000014877) #19 TEKTIP1 (ENSCJAG00000014896) #20 MFSD12 (ENSCJAG00000014897) #21 ENSCJAG00000003488 #22 GIPC3 (ENSCJAG00000014904) #23 TBXA2R (ENSCJAG00000014921) #24 CACTIN (ENSCJAG00000014929) #25 PIP5K1C (ENSCJAG00000014951) #26 TJP3 (ENSCJAG00000014958) #27 APBA3 (ENSCJAG00000014981) #28 MRPL54 (ENSCJAG00000014998) #29 RAX2 (ENSCJAG00000015003) #30 ENSCJAG00000079224 MATK (ENSCJAG00000015004) #31 ENSCJAG00000045089 ATCAY (ENSCJAG00000015022) #33 NMRK2 (ENSCJAG00000015033) #35 DAPK3 (ENSCJAG00000015041) #36 EEF2 (ENSCJAG00000015045) #37 Strepsirrhini ANCESTRAL SPECIES 26 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Lemuriformes ANCESTRAL SPECIES 22 ENSGT00940000162830 #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Mouse lemur MODERN SPECIES 16 ZNF77 (ENSMICG00000044639) #7 TLE6 (ENSMICG00000003016) #8 TLE2 (ENSMICG00000003029) #9 ENSMICG00000027776 #10 GNA11 (ENSMICG00000032000) #11 GNA15 (ENSMICG00000002977) #12 NCLN (ENSMICG00000007457) #13 CELF5 (ENSMICG00000003506) NFIC (ENSMICG00000006236) #15 SMIM24 (ENSMICG00000043267) #16 SMIM44 (ENSMICG00000044026) #17 DOHH (ENSMICG00000044244) #18 FZR1 (ENSMICG00000015945) #19 TEKTIP1 (ENSMICG00000043061) #20 MFSD12 (ENSMICG00000026672) #21 HMG20B (ENSMICG00000028142) #22 GIPC3 (ENSMICG00000012665) #23 TBXA2R (ENSMICG00000031426) #24 CACTIN (ENSMICG00000008291) #25 PIP5K1C (ENSMICG00000028246) #26 TJP3 (ENSMICG00000014731) #27 APBA3 (ENSMICG00000014756) #28 MRPL54 (ENSMICG00000034581) #29 RAX2 (ENSMICG00000014768) #30 MATK (ENSMICG00000014774) #31 ZFR2 (ENSMICG00000045224) #32 ATCAY (ENSMICG00000004504) #33 NMRK2 (ENSMICG00000037967) #35 DAPK3 (ENSMICG00000046071) #36 EEF2 (ENSMICG00000012772) #37 PIAS4 (ENSMICG00000012799) Lemuriformes_a ANCESTRAL SPECIES 17 ENSGT00940000164313 ENSGT00940000162830 #7 ENSGT00390000003403 #17 ENSGT00950000182916.a.a #15 ENSGT00940000154201.a.a.b.d ENSGT00500000044945.a #13 ENSGT00940000161736 #12 ENSGT00940000161033 #11 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a.g #10 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Greater bamboo lemur MODERN SPECIES 916 DOHH (ENSPSMG00000018920) #18 FZR1 (ENSPSMG00000018960) #19 TEKTIP1 (ENSPSMG00000018993) #20 MFSD12 (ENSPSMG00000019027) #21 HMG20B (ENSPSMG00000019054) #22 GIPC3 (ENSPSMG00000019070) #23 TBXA2R (ENSPSMG00000019078) #24 CACTIN (ENSPSMG00000019114) #25 PIP5K1C (ENSPSMG00000019141) #26 TJP3 (ENSPSMG00000019146) #27 APBA3 (ENSPSMG00000019152) #28 MRPL54 (ENSPSMG00000019157) #29 RAX2 (ENSPSMG00000019159) #30 MATK (ENSPSMG00000019201) #31 ZFR2 (ENSPSMG00000019220) #32 ATCAY (ENSPSMG00000019230) #33 NMRK2 (ENSPSMG00000019248) #35 DAPK3 (ENSPSMG00000019258) #36 EEF2 (ENSPSMG00000019307) #37 PIAS4 (ENSPSMG00000019356) Coquerels sifaka MODERN SPECIES 348 ZNF57 (ENSPCOG00000018829) ZNF77 (ENSPCOG00000024746) #7 SMIM44 (ENSPCOG00000024749) #17 NFIC (ENSPCOG00000027301) #15 CELF5 (ENSPCOG00000011528) NCLN (ENSPCOG00000024560) #13 GNA15 (ENSPCOG00000013834) #12 GNA11 (ENSPCOG00000024506) #11 ENSPCOG00000017438 #10 TLE2 (ENSPCOG00000028201) #9 TLE6 (ENSPCOG00000027942) #8 DOHH (ENSPCOG00000002793) #18 FZR1 (ENSPCOG00000020160) #19 TEKTIP1 (ENSPCOG00000017742) #20 MFSD12 (ENSPCOG00000023032) #21 HMG20B (ENSPCOG00000013810) #22 GIPC3 (ENSPCOG00000000061) #23 TBXA2R (ENSPCOG00000015698) #24 CACTIN (ENSPCOG00000015989) #25 PIP5K1C (ENSPCOG00000021588) #26 TJP3 (ENSPCOG00000020238) #27 APBA3 (ENSPCOG00000026721) #28 MRPL54 (ENSPCOG00000027550) #29 RAX2 (ENSPCOG00000022891) #30 MATK (ENSPCOG00000018010) #31 ZFR2 (ENSPCOG00000016923) #32 ATCAY (ENSPCOG00000027482) #33 NMRK2 (ENSPCOG00000022831) #35 DAPK3 (ENSPCOG00000023275) #36 EEF2 (ENSPCOG00000023522) #37 PIAS4 (ENSPCOG00000004662) Bushbaby MODERN SPECIES 144 ZNF555 (ENSOGAG00000000383) ENSOGAG00000002111 ENSOGAG00000032033 #8 TLE2 (ENSOGAG00000016146) #9 TLE5 (ENSOGAG00000016151) #10 GNA11 (ENSOGAG00000016154) #11 GNA15 (ENSOGAG00000026139) #12 S1PR4 (ENSOGAG00000032004) NCLN (ENSOGAG00000009302) #13 CELF5 (ENSOGAG00000014161) NFIC (ENSOGAG00000026321) #15 SMIM24 (ENSOGAG00000027356) #16 DOHH (ENSOGAG00000006502) #18 FZR1 (ENSOGAG00000014162) #19 MFSD12 (ENSOGAG00000014168) #21 HMG20B (ENSOGAG00000014171) #22 GIPC3 (ENSOGAG00000014175) #23 TBXA2R (ENSOGAG00000026948) #24 CACTIN (ENSOGAG00000010382) #25 PIP5K1C (ENSOGAG00000010393) #26 TJP3 (ENSOGAG00000017146) #27 APBA3 (ENSOGAG00000017147) #28 ENSOGAG00000033519 #29 RAX2 (ENSOGAG00000010138) #30 MATK (ENSOGAG00000004396) #31 ZFR2 (ENSOGAG00000017150) #32 ATCAY (ENSOGAG00000017156) #33 NMRK2 (ENSOGAG00000017158) #35 DAPK3 (ENSOGAG00000010293) #36 EEF2 (ENSOGAG00000010298) #37 PIAS4 (ENSOGAG00000001656) Euarchontoglires_A ANCESTRAL SPECIES 24 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Glires ANCESTRAL SPECIES 25 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Rodentia ANCESTRAL SPECIES 17 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Rodentia_A ANCESTRAL SPECIES 16 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Hystricomorpha ANCESTRAL SPECIES 19 ENSGT00500000044957 #18 ENSGT00390000003403 #17 ENSGT00940000154660.a #16 ENSGT00950000182916.a.a #15 ENSGT00940000154201.a.a.b.d ENSGT00500000044945.a #13 ENSGT01050000244887.B ENSGT00940000161736 #12 ENSGT00940000161033 #11 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00390000014000.i ENSGT00940000159993 ENSGT00940000158753 ENSGT00510000047872 Hystricomorpha_a ANCESTRAL SPECIES 15 ENSGT00940000159037 ENSGT00950000183171.A.b.a.b ENSGT00500000044957 #18 ENSGT00940000154660.a #16 ENSGT00950000182916.a.a #15 ENSGT00940000154201.a.a.b.d ENSGT00500000044945.a #13 ENSGT01050000244887.B ENSGT00940000161736 #12 ENSGT00940000161033 #11 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00390000014000.i ENSGT00940000159993 ENSGT00940000158753 ENSGT00510000047872 Guinea pig MODERN SPECIES 288 ENSCPOG00000004974 #12 GNA11 (ENSCPOG00000036119) #11 TLE5 (ENSCPOG00000036640) #10 TLE2 (ENSCPOG00000004144) #9 FZR1 (ENSCPOG00000019570) #19 TEKTIP1 (ENSCPOG00000024460) #20 MFSD12 (ENSCPOG00000009074) #21 HMG20B (ENSCPOG00000010777) #22 GIPC3 (ENSCPOG00000023224) #23 TBXA2R (ENSCPOG00000031050) #24 CACTIN (ENSCPOG00000003880) #25 PIP5K1C (ENSCPOG00000001951) #26 Hystricomorpha_b ANCESTRAL SPECIES 17 ENSGT00950000183171.A.b.a.b ENSGT00500000044957 #18 ENSGT00940000154660.a #16 ENSGT00950000182916.a.a #15 ENSGT00940000154201.a.a.b.d ENSGT00500000044945.a #13 ENSGT01050000244887.B ENSGT00940000161736 #12 ENSGT00940000161033 #11 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT00950000182965.b.fb ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00390000014000.i ENSGT00940000159993 ENSGT00940000158753 ENSGT00510000047872 Long-tailed chinchilla MODERN SPECIES 202 THOP1 (ENSCLAG00000015063) DOHH (ENSCLAG00000007817) #18 SMIM24 (ENSCLAG00000007177) #16 NFIC (ENSCLAG00000007526) #15 CELF5 (ENSCLAG00000009940) NCLN (ENSCLAG00000008645) #13 S1PR4 (ENSCLAG00000017878) GNA15 (ENSCLAG00000009774) #12 GNA11 (ENSCLAG00000010957) #11 TLE5 (ENSCLAG00000015307) #10 TLE2 (ENSCLAG00000007966) #9 ENSCLAG00000014106 FZR1 (ENSCLAG00000014081) #19 TEKTIP1 (ENSCLAG00000009360) #20 MFSD12 (ENSCLAG00000008160) #21 HMG20B (ENSCLAG00000012030) #22 GIPC3 (ENSCLAG00000009638) #23 TBXA2R (ENSCLAG00000010610) #24 CACTIN (ENSCLAG00000010714) #25 PIP5K1C (ENSCLAG00000011318) #26 TJP3 (ENSCLAG00000008035) #27 APBA3 (ENSCLAG00000010718) #28 MRPL54 (ENSCLAG00000007908) #29 MATK (ENSCLAG00000008473) #31 ZFR2 (ENSCLAG00000010137) #32 ATCAY (ENSCLAG00000013570) #33 NMRK2 (ENSCLAG00000008930) #35 ENSCLAG00000009705 TMPRSS9 (ENSCLAG00000007396) SPPL2B (ENSCLAG00000010153) LSM7 (ENSCLAG00000011635) Degu MODERN SPECIES 91 DOHH (ENSODEG00000014181) #18 ENSODEG00000015846 #16 NFIC (ENSODEG00000015267) #15 CELF5 (ENSODEG00000014460) NCLN (ENSODEG00000013853) #13 S1PR4 (ENSODEG00000020319) GNA15 (ENSODEG00000014085) #12 GNA11 (ENSODEG00000015009) #11 ENSODEG00000020164 ENSODEG00000014482 #10 TLE2 (ENSODEG00000014073) #9 ENSODEG00000013786 FZR1 (ENSODEG00000014514) #19 TEKTIP1 (ENSODEG00000013282) #20 MFSD12 (ENSODEG00000014260) #21 HMG20B (ENSODEG00000014653) #22 GIPC3 (ENSODEG00000013296) #23 TBXA2R (ENSODEG00000013384) #24 ENSODEG00000014734 #25 PIP5K1C (ENSODEG00000013830) #26 TJP3 (ENSODEG00000013512) #27 APBA3 (ENSODEG00000013581) #28 MRPL54 (ENSODEG00000013969) #29 MATK (ENSODEG00000014649) #31 ATCAY (ENSODEG00000013730) #33 NMRK2 (ENSODEG00000013977) #35 TIMM13 (ENSODEG00000014422) TMPRSS9 (ENSODEG00000014906) ENSODEG00000014560 ENSODEG00000013590 LINGO3 (ENSODEG00000020375) Naked mole-rat female MODERN SPECIES 21 ENSHGLG00000034587 ENSHGLG00000002680 ENSHGLG00000040658 #14 ENSHGLG00000010518 #13 S1PR4 (ENSHGLG00000042045) GNA15 (ENSHGLG00000033945) #12 GNA11 (ENSHGLG00000035049) #11 AES (ENSHGLG00000036417) #10 TLE2 (ENSHGLG00000013600) #9 ENSHGLG00000037855 #8 ENSHGLG00000049208 ENSHGLG00000016167 FZR1 (ENSHGLG00000019224) #19 ENSHGLG00000014588 #21 ENSHGLG00000033274 #20 HMG20B (ENSHGLG00000015242) #22 GIPC3 (ENSHGLG00000016188) #23 TBXA2R (ENSHGLG00000012829) #24 CACTIN (ENSHGLG00000016228) #25 ENSHGLG00000016360 #26 TJP3 (ENSHGLG00000014455) #27 APBA3 (ENSHGLG00000014560) #28 MRPL54 (ENSHGLG00000006157) #29 MATK (ENSHGLG00000006614) #31 ZFR2 (ENSHGLG00000010154) #32 ATCAY (ENSHGLG00000012464) #33 ENSHGLG00000005723 #35 TIMM13 (ENSHGLG00000042587) TMPRSS9 (ENSHGLG00000006952) SPPL2B (ENSHGLG00000008911) LSM7 (ENSHGLG00000010587) Sciuridae ANCESTRAL SPECIES 23 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Eurasian red squirrel MODERN SPECIES 7 ZNF77 (ENSSVLG00005022489) #7 ENSSVLG00005022518 #8 TLE2 (ENSSVLG00005022632) #9 TLE5 (ENSSVLG00005022954) #10 GNA11 (ENSSVLG00005023021) #11 GNA15 (ENSSVLG00005023052) #12 S1PR4 (ENSSVLG00005023097) NCLN (ENSSVLG00005023124) #13 CELF5 (ENSSVLG00005023165) NFIC (ENSSVLG00005023336) #15 ENSSVLG00005023514 DOHH (ENSSVLG00005023586) #18 FZR1 (ENSSVLG00005023633) #19 TEKTIP1 (ENSSVLG00005023668) #20 MFSD12 (ENSSVLG00005023702) #21 HMG20B (ENSSVLG00005023762) #22 GIPC3 (ENSSVLG00005023804) #23 TBXA2R (ENSSVLG00005023817) #24 CACTIN (ENSSVLG00005023836) #25 PIP5K1C (ENSSVLG00005023887) #26 TJP3 (ENSSVLG00005023962) #27 MRPL54 (ENSSVLG00005024184) #29 RAX2 (ENSSVLG00005024207) #30 MATK (ENSSVLG00005024229) #31 ZFR2 (ENSSVLG00005024341) #32 ATCAY (ENSSVLG00005024510) #33 ENSSVLG00005024541 #35 DAPK3 (ENSSVLG00005024571) #36 ENSSVLG00005024605 #37 PIAS4 (ENSSVLG00005024634) ZBTB7A (ENSSVLG00005024657) Marmotini ANCESTRAL SPECIES 24 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Alpin marmot MODERN SPECIES 88 SLC39A3 (ENSMMMG00000016507) SGTA (ENSMMMG00000016510) THOP1 (ENSMMMG00000016515) ENSMMMG00000016520 ZNF77 (ENSMMMG00000016522) #7 ENSMMMG00000016524 #9 ENSMMMG00000016526 #9 GNA11 (ENSMMMG00000016538) #11 ENSMMMG00000016752 #12 ENSMMMG00000016760 ENSMMMG00000016765 ENSMMMG00000016774 #20 DOHH (ENSMMMG00000016778) #18 ENSMMMG00000016780 #19 ENSMMMG00000016792 #21 HMG20B (ENSMMMG00000016794) #22 GIPC3 (ENSMMMG00000016813) #23 ENSMMMG00000016827 CACTIN (ENSMMMG00000016832) #25 TJP3 (ENSMMMG00000016855) #27 APBA3 (ENSMMMG00000016885) #28 ZFR2 (ENSMMMG00000016959) #32 NMRK2 (ENSMMMG00000017009) #35 DAPK3 (ENSMMMG00000017015) #36 EEF2 (ENSMMMG00000017019) #37 PIAS4 (ENSMMMG00000017032) MAP2K2 (ENSMMMG00000017211) ANKRD24 (ENSMMMG00000018078) ENSMMMG00000018130 YJU2 (ENSMMMG00000018139) SHD (ENSMMMG00000018157) Marmotini_b ANCESTRAL SPECIES 9 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Arctic ground squirrel MODERN SPECIES 301 ENSUPAG00010008199 #8 TLE2 (ENSUPAG00010008216) #9 TLE5 (ENSUPAG00010008263) #10 GNA11 (ENSUPAG00010008291) #11 GNA15 (ENSUPAG00010008318) #12 S1PR4 (ENSUPAG00010008324) NCLN (ENSUPAG00010008331) #13 ENSUPAG00010008374 #14 NFIC (ENSUPAG00010008410) #15 ENSUPAG00010008444 #16 SMIM44 (ENSUPAG00010008452) #17 DOHH (ENSUPAG00010008461) #18 FZR1 (ENSUPAG00010008472) #19 TEKTIP1 (ENSUPAG00010008492) #20 MFSD12 (ENSUPAG00010008498) #21 HMG20B (ENSUPAG00010008513) #22 GIPC3 (ENSUPAG00010008525) #23 TBXA2R (ENSUPAG00010008535) #24 CACTIN (ENSUPAG00010008542) #25 PIP5K1C (ENSUPAG00010008552) #26 TJP3 (ENSUPAG00010008756) #27 APBA3 (ENSUPAG00010008831) #28 MRPL54 (ENSUPAG00010008838) #29 RAX2 (ENSUPAG00010008848) #30 MATK (ENSUPAG00010008858) #31 ZFR2 (ENSUPAG00010009277) #32 ATCAY (ENSUPAG00010009286) #33 NMRK2 (ENSUPAG00010009304) #35 DAPK3 (ENSUPAG00010009346) #36 EEF2 (ENSUPAG00010009366) #37 PIAS4 (ENSUPAG00010009393) Squirrel MODERN SPECIES 188 THOP1 (ENSSTOG00000006054) ZNF77 (ENSSTOG00000034105) #7 TLE2 (ENSSTOG00000011134) #9 TLE5 (ENSSTOG00000028243) #10 GNA11 (ENSSTOG00000019951) #11 GNA15 (ENSSTOG00000021930) #12 S1PR4 (ENSSTOG00000024766) NCLN (ENSSTOG00000022427) #13 CELF5 (ENSSTOG00000002384) NFIC (ENSSTOG00000024218) #15 SMIM24 (ENSSTOG00000030174) #16 DOHH (ENSSTOG00000023074) #18 FZR1 (ENSSTOG00000002807) #19 TEKTIP1 (ENSSTOG00000026760) #20 MFSD12 (ENSSTOG00000002823) #21 HMG20B (ENSSTOG00000022314) #22 GIPC3 (ENSSTOG00000007215) #23 TBXA2R (ENSSTOG00000028290) #24 CACTIN (ENSSTOG00000001235) #25 PIP5K1C (ENSSTOG00000023021) #26 TJP3 (ENSSTOG00000024962) #27 APBA3 (ENSSTOG00000000352) #28 MRPL54 (ENSSTOG00000022378) #29 RAX2 (ENSSTOG00000024315) #30 MATK (ENSSTOG00000011892) #31 ZFR2 (ENSSTOG00000025821) #32 ATCAY (ENSSTOG00000026376) #33 NMRK2 (ENSSTOG00000021661) #35 DAPK3 (ENSSTOG00000005038) #36 EEF2 (ENSSTOG00000005050) #37 PIAS4 (ENSSTOG00000012472) Rodentia_B ANCESTRAL SPECIES 28 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Kangaroo rat MODERN SPECIES 383 Sgta (ENSDORG00000009907) Thop1 (ENSDORG00000008967) ENSDORG00000025434 #9 Tle5 (ENSDORG00000029584) #10 Gna11 (ENSDORG00000025425) #11 Gna15 (ENSDORG00000008491) #12 S1pr4 (ENSDORG00000029034) Ncln (ENSDORG00000009779) #13 ENSDORG00000005915 Nfic (ENSDORG00000002466) #15 Smim24 (ENSDORG00000028789) #16 ENSDORG00000024291 Fzr1 (ENSDORG00000012595) #19 ENSDORG00000012596 #20 Mfsd12 (ENSDORG00000012597) #21 ENSDORG00000030007 #22 Gipc3 (ENSDORG00000027124) #23 Tbxa2r (ENSDORG00000004093) #24 Cactin (ENSDORG00000004095) #25 Pip5k1c (ENSDORG00000004096) #26 Tjp3 (ENSDORG00000009449) #27 Apba3 (ENSDORG00000005324) #28 Mrpl54 (ENSDORG00000005326) #29 Matk (ENSDORG00000005330) #31 ENSDORG00000009741 #32 ENSDORG00000027174 Myomorpha ANCESTRAL SPECIES 27 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Muroidea ANCESTRAL SPECIES 32 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Muroidea_A ANCESTRAL SPECIES 25 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Cricetidae ANCESTRAL SPECIES 25 ENSGT00940000162830 #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Cricetinae ANCESTRAL SPECIES 4 ENSGT00940000159237.db.a ENSGT00940000160088 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Chinese hamster chok1gshd MODERN SPECIES 2 Sirt6 (ENSCGRG00001001515) Tle6 (ENSCGRG00001023857) #8 Tle2 (ENSCGRG00001015962) #9 Tle5 (ENSCGRG00001011131) #10 Gna11 (ENSCGRG00001021073) #11 Gna15 (ENSCGRG00001019244) #12 S1pr4 (ENSCGRG00001009743) Ncln (ENSCGRG00001014212) #13 ENSCGRG00001002551 #14 Nfic (ENSCGRG00001015960) #15 Smim24 (ENSCGRG00001024709) #16 DOHH (ENSCGRG00001018617) #18 Fzr1 (ENSCGRG00001015616) #19 Tektip1 (ENSCGRG00001012954) #20 Mfsd12 (ENSCGRG00001018366) #21 Hmg20b (ENSCGRG00001016795) #22 Gipc3 (ENSCGRG00001016082) #23 Tbxa2r (ENSCGRG00001014446) #24 Cactin (ENSCGRG00001021287) #25 Pip5k1c (ENSCGRG00001017002) #26 Tjp3 (ENSCGRG00001001459) #27 Apba3 (ENSCGRG00001019836) #28 Mrpl54 (ENSCGRG00001019482) #29 Matk (ENSCGRG00001015278) #31 Zfr2 (ENSCGRG00001019870) #32 Atcay (ENSCGRG00001017209) #33 Nmrk2 (ENSCGRG00001016553) #35 Dapk3 (ENSCGRG00001006998) #36 Eef2 (ENSCGRG00001021031) #37 Pias4 (ENSCGRG00001019465) Zbtb7a (ENSCGRG00001019218) Golden Hamster MODERN SPECIES 764 Tle6 (ENSMAUG00000010384) #8 ENSMAUG00000010830 #9 ENSMAUG00000013065 #9 Tle5 (ENSMAUG00000020765) #10 Gna11 (ENSMAUG00000004382) #11 Gna15 (ENSMAUG00000016578) #12 S1pr4 (ENSMAUG00000008594) Ncln (ENSMAUG00000015425) #13 ENSMAUG00000020336 #14 Nfic (ENSMAUG00000018380) #15 Smim24 (ENSMAUG00000002297) #16 Dohh (ENSMAUG00000008351) #18 Fzr1 (ENSMAUG00000000921) #19 Tektip1 (ENSMAUG00000010716) #20 Mfsd12 (ENSMAUG00000009940) #21 Hmg20b (ENSMAUG00000020413) #22 Gipc3 (ENSMAUG00000021524) #23 Tbxa2r (ENSMAUG00000015276) #24 Cactin (ENSMAUG00000011643) #25 Pip5k1c (ENSMAUG00000014134) #26 Tjp3 (ENSMAUG00000010092) #27 Apba3 (ENSMAUG00000007859) #28 Mrpl54 (ENSMAUG00000009543) #29 Matk (ENSMAUG00000019712) #31 Zfr2 (ENSMAUG00000016438) #32 Atcay (ENSMAUG00000017532) #33 Nmrk2 (ENSMAUG00000003333) #35 Dapk3 (ENSMAUG00000021234) #36 Eef2 (ENSMAUG00000007062) #37 Pias4 (ENSMAUG00000012696) Zbtb7a (ENSMAUG00000019026) Cricetidae_B ANCESTRAL SPECIES 27 ENSGT00940000162830 #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Prairie vole MODERN SPECIES 349 Sirt6 (ENSMOCG00000020031) Tle6 (ENSMOCG00000021233) #8 Tle2 (ENSMOCG00000021122) #9 ENSMOCG00000020375 #10 Gna11 (ENSMOCG00000001264) #11 Gna15 (ENSMOCG00000007607) #12 S1pr4 (ENSMOCG00000001385) Ncln (ENSMOCG00000010643) #13 ENSMOCG00000005573 #14 Nfic (ENSMOCG00000021133) #15 Smim24 (ENSMOCG00000012959) #16 Dohh (ENSMOCG00000014902) #18 Fzr1 (ENSMOCG00000012552) #19 Tektip1 (ENSMOCG00000017658) #20 Mfsd12 (ENSMOCG00000020987) #21 Hmg20b (ENSMOCG00000001874) #22 Gipc3 (ENSMOCG00000002475) #23 Tbxa2r (ENSMOCG00000005701) #24 Cactin (ENSMOCG00000011992) #25 Pip5k1c (ENSMOCG00000008488) #26 Tjp3 (ENSMOCG00000013578) #27 Apba3 (ENSMOCG00000015694) #28 Mrpl54 (ENSMOCG00000017895) #29 Matk (ENSMOCG00000001438) #31 Zfr2 (ENSMOCG00000010727) #32 Atcay (ENSMOCG00000011102) #33 Nmrk2 (ENSMOCG00000003146) #35 Dapk3 (ENSMOCG00000019017) #36 ENSMOCG00000019369 #37 Pias4 (ENSMOCG00000022430) Zbtb7a (ENSMOCG00000010291) Northern American deer mouse MODERN SPECIES 14 Tle2 (ENSPEMG00000023812) #9 Tle5 (ENSPEMG00000022384) #10 Gna11 (ENSPEMG00000020340) #11 Gna15 (ENSPEMG00000022124) #12 S1pr4 (ENSPEMG00000007107) Ncln (ENSPEMG00000001818) #13 Celf5 (ENSPEMG00000021763) ENSPEMG00000030211 Nfic (ENSPEMG00000022565) #15 ENSPEMG00000028186 Smim24 (ENSPEMG00000021225) #16 ENSPEMG00000014213 #18 Fzr1 (ENSPEMG00000020284) #19 Tektip1 (ENSPEMG00000029958) #20 Mfsd12 (ENSPEMG00000020766) #21 Hmg20b (ENSPEMG00000014935) #22 Gipc3 (ENSPEMG00000014161) #23 Tbxa2r (ENSPEMG00000015376) #24 Cactin (ENSPEMG00000021732) #25 Pip5k1c (ENSPEMG00000020543) #26 Tjp3 (ENSPEMG00000021396) #27 Apba3 (ENSPEMG00000021227) #28 Mrpl54 (ENSPEMG00000022929) #29 Matk (ENSPEMG00000020804) #31 Zfr2 (ENSPEMG00000020763) #32 Atcay (ENSPEMG00000021027) #33 Nmrk2 (ENSPEMG00000021630) #35 ENSPEMG00000020977 Eef2 (ENSPEMG00000021167) #37 Pias4 (ENSPEMG00000021214) Zbtb7a (ENSPEMG00000025614) Murinae ANCESTRAL SPECIES 25 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Mus ANCESTRAL SPECIES 15 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Mus_A ANCESTRAL SPECIES 11 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a.c.b #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Mus_B ANCESTRAL SPECIES 10 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a.c.b #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Mouse MODERN SPECIES 1 Tle2 (ENSMUSG00000034771) #9 Tle5 (ENSMUSG00000054452) #10 Gna11 (ENSMUSG00000034781) #11 Gna15 (ENSMUSG00000034792) #12 S1pr4 (ENSMUSG00000044199) Ncln (ENSMUSG00000020238) #13 Celf5 (ENSMUSG00000034818) Nfic (ENSMUSG00000055053) #15 Smim24 (ENSMUSG00000078439) #16 Gm48552 (ENSMUSG00000114004) #17 Gm48551 (ENSMUSG00000113262) Dohh (ENSMUSG00000078440) #18 Fzr1 (ENSMUSG00000020235) #19 Tektip1 (ENSMUSG00000020234) #20 Mfsd12 (ENSMUSG00000034854) #21 Hmg20b (ENSMUSG00000020232) #22 Gipc3 (ENSMUSG00000034872) #23 Tbxa2r (ENSMUSG00000034881) #24 Cactin (ENSMUSG00000034889) #25 Pip5k1c (ENSMUSG00000034902) #26 Tjp3 (ENSMUSG00000034917) #27 Apba3 (ENSMUSG00000004931) #28 Mrpl54 (ENSMUSG00000034932) #29 Matk (ENSMUSG00000004933) #31 Zfr2 (ENSMUSG00000034949) #32 Atcay (ENSMUSG00000034958) #33 Nmrk2 (ENSMUSG00000004939) #35 Dapk3 (ENSMUSG00000034974) #36 Eef2 (ENSMUSG00000034994) #37 Pias4 (ENSMUSG00000004934) Zbtb7a (ENSMUSG00000035011) Mus_C ANCESTRAL SPECIES 7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a.c.b #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Steppe mouse MODERN SPECIES 2590 Gna11 (ENSMSIG00000023685) #11 Gna15 (ENSMSIG00000023707) #12 S1pr4 (ENSMSIG00000023728) Ncln (ENSMSIG00000023731) #13 ENSMSIG00000023759 #14 ENSMSIG00000023822 #15 Smim24 (ENSMSIG00000023837) #16 Gm48552 (ENSMSIG00000023854) #17 Dohh (ENSMSIG00000023865) #18 ENSMSIG00000023889 #19 Tektip1 (ENSMSIG00000023924) #20 Mfsd12 (ENSMSIG00000023928) #21 Hmg20b (ENSMSIG00000023944) #22 Gipc3 (ENSMSIG00000024007) #23 Tbxa2r (ENSMSIG00000024021) #24 Cactin (ENSMSIG00000024042) #25 Pip5k1c (ENSMSIG00000024074) #26 Tjp3 (ENSMSIG00000024242) #27 Apba3 (ENSMSIG00000024307) #28 ENSMSIG00000024325 #29 Matk (ENSMSIG00000024338) #31 Zfr2 (ENSMSIG00000024392) #32 Atcay (ENSMSIG00000024422) #33 Nmrk2 (ENSMSIG00000024431) #35 Dapk3 (ENSMSIG00000024443) #36 ENSMSIG00000024474 #37 Pias4 (ENSMSIG00000024505) ENSMSIG00000024524 spretus MODERN SPECIES 1 BC025920 (MGP_SPRETEiJ_G0016469) #7 Tle6 (MGP_SPRETEiJ_G0016468) #8 Tle2 (MGP_SPRETEiJ_G0016467) #9 Tle5 (MGP_SPRETEiJ_G0016466) #10 Gna11 (MGP_SPRETEiJ_G0016465) #11 Gna15 (MGP_SPRETEiJ_G0016464) #12 S1pr4 (MGP_SPRETEiJ_G0016463) MGP_SPRETEiJ_G0016462 #13 Celf5 (MGP_SPRETEiJ_G0016461) Nfic (MGP_SPRETEiJ_G0016460) #15 Smim24 (MGP_SPRETEiJ_G0016459) #16 Dohh (MGP_SPRETEiJ_G0016458) #18 Fzr1 (MGP_SPRETEiJ_G0016457) #19 Tektip1 (MGP_SPRETEiJ_G0016456) #20 Mfsd12 (MGP_SPRETEiJ_G0016455) #21 Hmg20b (MGP_SPRETEiJ_G0016454) #22 Gipc3 (MGP_SPRETEiJ_G0016453) #23 Tbxa2r (MGP_SPRETEiJ_G0016452) #24 Cactin (MGP_SPRETEiJ_G0016451) #25 Pip5k1c (MGP_SPRETEiJ_G0016450) #26 Tjp3 (MGP_SPRETEiJ_G0016449) #27 Apba3 (MGP_SPRETEiJ_G0016448) #28 Mrpl54 (MGP_SPRETEiJ_G0016447) #29 Matk (MGP_SPRETEiJ_G0016446) #31 Zfr2 (MGP_SPRETEiJ_G0016445) #32 Atcay (MGP_SPRETEiJ_G0016444) #33 Nmrk2 (MGP_SPRETEiJ_G0016443) #35 Dapk3 (MGP_SPRETEiJ_G0016442) #36 MGP_SPRETEiJ_G0016441 Eef2 (MGP_SPRETEiJ_G0016440) #37 Pias4 (MGP_SPRETEiJ_G0016439) Ryukyu mouse MODERN SPECIES 1 BC025920 (MGP_CAROLIEiJ_G0015651) #7 MGP_CAROLIEiJ_G0015650 Tle2 (MGP_CAROLIEiJ_G0015649) #9 Tle5 (MGP_CAROLIEiJ_G0015648) #10 Gna11 (MGP_CAROLIEiJ_G0015647) #11 Gna15 (MGP_CAROLIEiJ_G0015646) #12 S1pr4 (MGP_CAROLIEiJ_G0015645) Ncln (MGP_CAROLIEiJ_G0015644) #13 Celf5 (MGP_CAROLIEiJ_G0015643) Nfic (MGP_CAROLIEiJ_G0015642) #15 Smim24 (MGP_CAROLIEiJ_G0015641) #16 MGP_CAROLIEiJ_G0015640 #18 Fzr1 (MGP_CAROLIEiJ_G0015639) #19 Tektip1 (MGP_CAROLIEiJ_G0015638) #20 Mfsd12 (MGP_CAROLIEiJ_G0015637) #21 Hmg20b (MGP_CAROLIEiJ_G0015636) #22 Gipc3 (MGP_CAROLIEiJ_G0015635) #23 Tbxa2r (MGP_CAROLIEiJ_G0015634) #24 Cactin (MGP_CAROLIEiJ_G0015633) #25 Pip5k1c (MGP_CAROLIEiJ_G0015632) #26 Tjp3 (MGP_CAROLIEiJ_G0015631) #27 Apba3 (MGP_CAROLIEiJ_G0015630) #28 Mrpl54 (MGP_CAROLIEiJ_G0015629) #29 Matk (MGP_CAROLIEiJ_G0015628) #31 Zfr2 (MGP_CAROLIEiJ_G0015627) #32 Atcay (MGP_CAROLIEiJ_G0015626) #33 Nmrk2 (MGP_CAROLIEiJ_G0015625) #35 Dapk3 (MGP_CAROLIEiJ_G0015624) #36 MGP_CAROLIEiJ_G0015623 Eef2 (MGP_CAROLIEiJ_G0015622) #37 Pias4 (MGP_CAROLIEiJ_G0015621) Shrew mouse MODERN SPECIES 22 MGP_PahariEiJ_G0031064 #7 MGP_PahariEiJ_G0031063 Tle2 (MGP_PahariEiJ_G0031062) #9 Tle5 (MGP_PahariEiJ_G0031061) #10 Gna11 (MGP_PahariEiJ_G0031060) #11 Gna15 (MGP_PahariEiJ_G0031059) #12 S1pr4 (MGP_PahariEiJ_G0031058) Ncln (MGP_PahariEiJ_G0031057) #13 Celf5 (MGP_PahariEiJ_G0031056) Nfic (MGP_PahariEiJ_G0031055) #15 Smim24 (MGP_PahariEiJ_G0031054) #16 MGP_PahariEiJ_G0031053 #18 Fzr1 (MGP_PahariEiJ_G0031052) #19 Tektip1 (MGP_PahariEiJ_G0031051) #20 Mfsd12 (MGP_PahariEiJ_G0031050) #21 Hmg20b (MGP_PahariEiJ_G0031049) #22 Gipc3 (MGP_PahariEiJ_G0031048) #23 Tbxa2r (MGP_PahariEiJ_G0031047) #24 Cactin (MGP_PahariEiJ_G0031046) #25 Pip5k1c (MGP_PahariEiJ_G0031045) #26 Tjp3 (MGP_PahariEiJ_G0031044) #27 Apba3 (MGP_PahariEiJ_G0031043) #28 Mrpl54 (MGP_PahariEiJ_G0031042) #29 Matk (MGP_PahariEiJ_G0031041) #31 Zfr2 (MGP_PahariEiJ_G0031040) #32 Atcay (MGP_PahariEiJ_G0031039) #33 Nmrk2 (MGP_PahariEiJ_G0031038) #35 Dapk3 (MGP_PahariEiJ_G0031037) #36 MGP_PahariEiJ_G0031036 Eef2 (MGP_PahariEiJ_G0031035) #37 Pias4 (MGP_PahariEiJ_G0031034) Rat MODERN SPECIES 17 Tle6 (ENSRNOG00000006350) #8 Tle2 (ENSRNOG00000005874) #9 Tle5 (ENSRNOG00000052025) #10 Gna11 (ENSRNOG00000005446) #11 Gna15 (ENSRNOG00000005378) #12 S1pr4 (ENSRNOG00000005370) Ncln (ENSRNOG00000004793) #13 Celf5 (ENSRNOG00000004695) Nfic (ENSRNOG00000004505) #15 AC094643.2 (ENSRNOG00000053040) Smim44 (ENSRNOG00000066999) #17 Dohh (ENSRNOG00000004259) #18 Fzr1 (ENSRNOG00000004169) #19 Tektip1 (ENSRNOG00000039861) #20 Mfsd12 (ENSRNOG00000039858) #21 Hmg20b (ENSRNOG00000020601) #22 Tbxa2r (ENSRNOG00000020585) #24 Cactin (ENSRNOG00000039852) #25 Pip5k1c (ENSRNOG00000020577) #26 Tjp3 (ENSRNOG00000020501) #27 Apba3 (ENSRNOG00000020466) #28 Mrpl54 (ENSRNOG00000020464) #29 Matk (ENSRNOG00000020431) #31 Zfr2 (ENSRNOG00000020416) #32 Atcay (ENSRNOG00000020407) #33 Nmrk2 (ENSRNOG00000042897) #35 Dapk3 (ENSRNOG00000020383) #36 Eef2 (ENSRNOG00000020266) #37 Pias4 (ENSRNOG00000020230) Zbtb7a (ENSRNOG00000020161) Map2k2 (ENSRNOG00000020005) Upper Galilee mountains blind mole rat MODERN SPECIES 975 Sirt6 (ENSNGAG00000022728) ENSNGAG00000022046 #8 ENSNGAG00000009655 #9 ENSNGAG00000019164 #9 Tle5 (ENSNGAG00000023222) #10 Gna11 (ENSNGAG00000018151) #11 Gna15 (ENSNGAG00000022090) #12 S1pr4 (ENSNGAG00000014520) Ncln (ENSNGAG00000023405) #13 ENSNGAG00000019694 Nfic (ENSNGAG00000021483) #15 Smim24 (ENSNGAG00000020934) #16 Dohh (ENSNGAG00000023202) #18 Fzr1 (ENSNGAG00000019979) #19 Mfsd12 (ENSNGAG00000021286) #21 Hmg20b (ENSNGAG00000022055) #22 Gipc3 (ENSNGAG00000022438) #23 Tbxa2r (ENSNGAG00000023199) #24 Cactin (ENSNGAG00000020699) #25 Pip5k1c (ENSNGAG00000021521) #26 Tjp3 (ENSNGAG00000001234) #27 Apba3 (ENSNGAG00000022342) #28 Mrpl54 (ENSNGAG00000021044) #29 Matk (ENSNGAG00000021707) #31 Zfr2 (ENSNGAG00000021831) #32 Atcay (ENSNGAG00000022622) #33 Nmrk2 (ENSNGAG00000020749) #35 Dapk3 (ENSNGAG00000020954) #36 Eef2 (ENSNGAG00000001879) #37 Pias4 (ENSNGAG00000023389) Zbtb7a (ENSNGAG00000021628) Lesser Egyptian jerboa MODERN SPECIES 55 Sirt6 (ENSJJAG00000016800) ENSJJAG00000012399 #9 ENSJJAG00000023070 #9 Tle5 (ENSJJAG00000015784) #10 Gna11 (ENSJJAG00000018855) #11 Gna15 (ENSJJAG00000013894) #12 S1pr4 (ENSJJAG00000000603) Ncln (ENSJJAG00000004276) #13 ENSJJAG00000006902 #14 Nfic (ENSJJAG00000014906) #15 Smim24 (ENSJJAG00000001987) #16 Dohh (ENSJJAG00000023778) #18 Fzr1 (ENSJJAG00000007462) #19 ENSJJAG00000014542 #20 Mfsd12 (ENSJJAG00000023170) #21 Hmg20b (ENSJJAG00000014863) #22 Tbxa2r (ENSJJAG00000015378) #24 Cactin (ENSJJAG00000021015) #25 Pip5k1c (ENSJJAG00000014211) #26 Tjp3 (ENSJJAG00000020883) #27 Apba3 (ENSJJAG00000013868) #28 Mrpl54 (ENSJJAG00000020405) #29 Matk (ENSJJAG00000017018) #31 Zfr2 (ENSJJAG00000014635) #32 Atcay (ENSJJAG00000007757) #33 Nmrk2 (ENSJJAG00000000373) #35 Eef2 (ENSJJAG00000017122) #37 Pias4 (ENSJJAG00000012061) Zbtb7a (ENSJJAG00000006307) ENSJJAG00000016736 Creb3l3 (ENSJJAG00000019067) Laurasiatheria ANCESTRAL SPECIES 15 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Laurasiatheria_a ANCESTRAL SPECIES 19 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Laurasiatheria_b ANCESTRAL SPECIES 18 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Carnivora ANCESTRAL SPECIES 6 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Caniformia ANCESTRAL SPECIES 4 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00390000003403 #17 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Caniformia_b ANCESTRAL SPECIES 23 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##10 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00390000003403 #17 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Mustelinae ANCESTRAL SPECIES 19 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##10 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148.w #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a ENSGT00940000162053 Ferret MODERN SPECIES 326 ENSMPUG00000003353 #10 ENSMPUG00000003642 GNA11 (ENSMPUG00000003649) #11 GNA15 (ENSMPUG00000003706) #12 S1PR4 (ENSMPUG00000019701) ENSMPUG00000003708 NCLN (ENSMPUG00000003713) #13 CELF5 (ENSMPUG00000003723) NFIC (ENSMPUG00000003850) #15 ENSMPUG00000003859 ENSMPUG00000003863 #16 DOHH (ENSMPUG00000003868) #18 ENSMPUG00000019702 FZR1 (ENSMPUG00000003874) #19 MFSD12 (ENSMPUG00000003886) #21 HMG20B (ENSMPUG00000003925) #22 GIPC3 (ENSMPUG00000003985) #23 TBXA2R (ENSMPUG00000004032) #24 CACTIN (ENSMPUG00000004036) #25 PIP5K1C (ENSMPUG00000004050) #26 TJP3 (ENSMPUG00000004062) #27 APBA3 (ENSMPUG00000004145) #28 MRPL54 (ENSMPUG00000004155) #29 MATK (ENSMPUG00000004170) #31 ENSMPUG00000004305 #32 ATCAY (ENSMPUG00000004453) #33 DAPK3 (ENSMPUG00000004467) #36 EEF2 (ENSMPUG00000004478) #37 PIAS4 (ENSMPUG00000004495) ZBTB7A (ENSMPUG00000004703) MAP2K2 (ENSMPUG00000004715) American mink MODERN SPECIES 175 ENSNVIG00000005595 ENSNVIG00000005725 #8 TLE2 (ENSNVIG00000005768) #9 ENSNVIG00000005979 ##10 GNA11 (ENSNVIG00000006010) #11 GNA15 (ENSNVIG00000006085) #12 S1PR4 (ENSNVIG00000006107) NCLN (ENSNVIG00000006116) #13 ENSNVIG00000006149 NFIC (ENSNVIG00000006247) #15 CS077 (ENSNVIG00000006275) #16 DOHH (ENSNVIG00000006293) #18 FZR (ENSNVIG00000006305) #19 TEKTIP1 (ENSNVIG00000006395) #20 MFSD12 (ENSNVIG00000006407) #21 HMG20B (ENSNVIG00000006433) #22 GIPC3 (ENSNVIG00000006504) #23 TBXA2R (ENSNVIG00000006523) #24 CACTIN (ENSNVIG00000006539) #25 PIP5K1C (ENSNVIG00000006640) #26 TJP3 (ENSNVIG00000006858) #27 APBA3 (ENSNVIG00000006915) #28 MRPL54 (ENSNVIG00000006941) #29 RAX2 (ENSNVIG00000006966) #30 MATK (ENSNVIG00000006982) #31 ZFR2 (ENSNVIG00000007143) #32 ATCAY (ENSNVIG00000007200) #33 DAPK3 (ENSNVIG00000007242) #36 EEF2 (ENSNVIG00000007264) #37 PIAS4 (ENSNVIG00000007291) ZBTB7A (ENSNVIG00000007312) Ursidae ANCESTRAL SPECIES 20 ENSGT00940000164918.e ENSGT01030000234519.e.a.a.b.a.a.a.f #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Giant Panda MODERN SPECIES 14 ENSAMEG00000029425 TLE6 (ENSAMEG00000005371) #8 TLE2 (ENSAMEG00000005391) #9 ENSAMEG00000029178 ##10 GNA11 (ENSAMEG00000005458) #11 GNA15 (ENSAMEG00000005493) #12 S1PR4 (ENSAMEG00000005495) NCLN (ENSAMEG00000005496) #13 ENSAMEG00000005527 #14 NFIC (ENSAMEG00000005577) #15 ENSAMEG00000030871 ENSAMEG00000028568 #17 ENSAMEG00000005619 #18 ENSAMEG00000030978 #20 MFSD12 (ENSAMEG00000005668) #21 ENSAMEG00000030856 #22 GIPC3 (ENSAMEG00000005731) #23 ENSAMEG00000028252 TBXA2R (ENSAMEG00000005733) #24 CACTIN (ENSAMEG00000005743) #25 PIP5K1C (ENSAMEG00000005756) #26 TJP3 (ENSAMEG00000005786) #27 APBA3 (ENSAMEG00000005876) #28 MRPL54 (ENSAMEG00000028994) #29 RAX2 (ENSAMEG00000005914) #30 MATK (ENSAMEG00000005916) #31 ZFR2 (ENSAMEG00000005974) #32 ATCAY (ENSAMEG00000006007) #33 DAPK3 (ENSAMEG00000006056) #36 EEF2 (ENSAMEG00000002286) #37 PIAS4 (ENSAMEG00000002251) Ursus ANCESTRAL SPECIES 136 ENSGT00940000159350 ENSGT00390000012901 ENSGT00390000003477 ENSGT00940000158750.t ENSGT00940000172520 ENSGT00940000158750.s ENSGT00390000000483.b ENSGT00390000014853 ENSGT00390000016221 ENSGT00940000160490 ENSGT00940000154127.A ENSGT00940000154127.B ENSGT01030000234527.A.a.b.b.b ENSGT00390000003220 ENSGT00940000153713.B.c ENSGT00940000161213 #22 ENSGT00390000016928 ENSGT00950000182864.a.b.b.a.b.a.a.b ENSGT01030000234638.b.a.b Polar bear MODERN SPECIES 127 SLC2A9 (ENSUMAG00000000390) DRD5 (ENSUMAG00000000366) TMEM128 (ENSUMAG00000000346) LYAR (ENSUMAG00000000338) ENSUMAG00000000326 ENSUMAG00000000295 ENSUMAG00000000249 STX18 (ENSUMAG00000000239) CYTL1 (ENSUMAG00000000052) STK32B (ENSUMAG00000023066) EVC2 (ENSUMAG00000023028) EVC (ENSUMAG00000022996) CRMP1 (ENSUMAG00000022987) ENSUMAG00000022986 JAKMIP1 (ENSUMAG00000022960) ENSUMAG00000022951 #22 WFS1 (ENSUMAG00000022949) PPP2R2C (ENSUMAG00000022937) MAN2B2 (ENSUMAG00000022900) American black bear DUPLICATION American black bear MODERN SPECIES 1079 ENSUAMG00000022663 JAKMIP1 (ENSUAMG00000022635) ENSUAMG00000022622 #22 WFS1 (ENSUAMG00000022617) American black bear MODERN SPECIES 4407 HMG20B (ENSUAMG00000017192) #22 ENSUAMG00000017194 #22 GIPC3 (ENSUAMG00000017195) #23 ENSUAMG00000017198 TBXA2R (ENSUAMG00000017199) #24 CACTIN (ENSUAMG00000017201) #25 PIP5K1C (ENSUAMG00000017203) #26 American black bear MODERN SPECIES 4407 PIP5K1C (ENSUAMG00000017203) #26 CACTIN (ENSUAMG00000017201) #25 TBXA2R (ENSUAMG00000017199) #24 ENSUAMG00000017198 GIPC3 (ENSUAMG00000017195) #23 ENSUAMG00000017194 #22 HMG20B (ENSUAMG00000017192) #22 Canidae ANCESTRAL SPECIES ENSGT00940000164918 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Red fox MODERN SPECIES 163 TLE2 (ENSVVUG00000002888) #9 ENSVVUG00000002912 ##10 GNA11 (ENSVVUG00000002939) #11 GNA15 (ENSVVUG00000002952) #12 S1PR4 (ENSVVUG00000002968) NCLN (ENSVVUG00000002992) #13 ENSVVUG00000003242 ENSVVUG00000003246 ENSVVUG00000003252 NFIC (ENSVVUG00000003261) #15 SMIM24 (ENSVVUG00000003269) #16 DOHH (ENSVVUG00000003275) #18 FZR1 (ENSVVUG00000003282) #19 CUNH19orf71 (ENSVVUG00000003289) #20 MFSD12 (ENSVVUG00000003293) #21 HMG20B (ENSVVUG00000003300) #22 GIPC3 (ENSVVUG00000003327) #23 TBXA2R (ENSVVUG00000003357) #24 CACTIN (ENSVVUG00000003362) #25 PIP5K1C (ENSVVUG00000003369) #26 TJP3 (ENSVVUG00000003419) #27 APBA3 (ENSVVUG00000004405) #28 MRPL54 (ENSVVUG00000004420) #29 RAX2 (ENSVVUG00000004425) #30 MATK (ENSVVUG00000004432) #31 ZFR2 (ENSVVUG00000004526) #32 ATCAY (ENSVVUG00000004561) #33 DAPK3 (ENSVVUG00000004576) #36 EEF2 (ENSVVUG00000004661) #37 PIAS4 (ENSVVUG00000008067) MAP2K2 (ENSVVUG00000008089) Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000164918 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662.y #37 ENSGT01030000234539.a.a.a Dog MODERN SPECIES 12 ENSCAFG00845011169 ENSCAFG00845011118 #8 TLE2 (ENSCAFG00845010748) #9 GNA11 (ENSCAFG00845010571) #11 TLE5 (ENSCAFG00845010466) #10 GNA15 (ENSCAFG00845010390) #12 S1PR4 (ENSCAFG00845010367) NCLN (ENSCAFG00845010334) #13 CELF5 (ENSCAFG00845010202) NFIC (ENSCAFG00845009756) #15 SMIM24 (ENSCAFG00845009603) #16 DOHH (ENSCAFG00845009508) #18 FZR1 (ENSCAFG00845009377) #19 C20H19orf71 (ENSCAFG00845009301) #20 MFSD12 (ENSCAFG00845009196) #21 ENSCAFG00845009058 #22 GIPC3 (ENSCAFG00845009000) #23 ENSCAFG00845008979 TBXA2R (ENSCAFG00845008905) #24 CACTIN (ENSCAFG00845008863) #25 PIP5K1C (ENSCAFG00845008444) #26 TJP3 (ENSCAFG00845008169) #27 APBA3 (ENSCAFG00845008066) #28 MRPL54 (ENSCAFG00845008032) #29 RAX2 (ENSCAFG00845008002) #30 MATK (ENSCAFG00845007724) #31 ZFR2 (ENSCAFG00845007434) #32 ENSCAFG00845007313 ATCAY (ENSCAFG00845007239) #33 DAPK3 (ENSCAFG00845007165) #36 EEF2 (ENSCAFG00845007003) #37 Dingo MODERN SPECIES 112 ENSCAFG00020018224 ENSCAFG00020018225 ENSCAFG00020018228 #8 TLE2 (ENSCAFG00020018233) #9 TLE5 (ENSCAFG00020018242) #10 GNA11 (ENSCAFG00020018245) #11 GNA15 (ENSCAFG00020018249) #12 NCLN (ENSCAFG00020018259) #13 CELF5 (ENSCAFG00020018264) NFIC (ENSCAFG00020018281) #15 ENSCAFG00020018292 #16 DOHH (ENSCAFG00020018295) #18 FZR1 (ENSCAFG00020018296) #19 TEKTIP1 (ENSCAFG00020018300) #20 MFSD12 (ENSCAFG00020018303) #21 HMG20B (ENSCAFG00020018306) #22 GIPC3 (ENSCAFG00020018309) #23 TBXA2R (ENSCAFG00020018318) #24 CACTIN (ENSCAFG00020018320) #25 PIP5K1C (ENSCAFG00020018324) #26 TJP3 (ENSCAFG00020018326) #27 APBA3 (ENSCAFG00020018330) #28 MRPL54 (ENSCAFG00020018333) #29 RAX2 (ENSCAFG00020018334) #30 MATK (ENSCAFG00020018336) #31 ZFR2 (ENSCAFG00020018341) #32 ATCAY (ENSCAFG00020018366) #33 ENSCAFG00020018372 DAPK3 (ENSCAFG00020018374) #36 ENSCAFG00020018386 #37 PIAS4 (ENSCAFG00020018476) Felidae ANCESTRAL SPECIES 21 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Cat MODERN SPECIES 1 ENSFCAG00000035220 TLE6 (ENSFCAG00000013862) #8 TLE2 (ENSFCAG00000013863) #9 TLE5 (ENSFCAG00000039147) #10 GNA11 (ENSFCAG00000044642) #11 GNA15 (ENSFCAG00000007124) #12 S1PR4 (ENSFCAG00000007126) NCLN (ENSFCAG00000029146) #13 CELF5 (ENSFCAG00000007127) NFIC (ENSFCAG00000000880) #15 SMIM24 (ENSFCAG00000052509) #16 DOHH (ENSFCAG00000030060) #18 FZR1 (ENSFCAG00000002157) #19 CA2H19orf71 (ENSFCAG00000000882) #20 MFSD12 (ENSFCAG00000000883) #21 HMG20B (ENSFCAG00000026167) #22 GIPC3 (ENSFCAG00000007137) #23 ENSFCAG00000051232 TBXA2R (ENSFCAG00000012120) #24 CACTIN (ENSFCAG00000023235) #25 PIP5K1C (ENSFCAG00000007139) #26 TJP3 (ENSFCAG00000007142) #27 APBA3 (ENSFCAG00000019172) #28 MRPL54 (ENSFCAG00000007144) #29 RAX2 (ENSFCAG00000040863) #30 MATK (ENSFCAG00000026653) #31 ZFR2 (ENSFCAG00000007145) #32 ATCAY (ENSFCAG00000013498) #33 DAPK3 (ENSFCAG00000013501) #36 EEF2 (ENSFCAG00000000909) #37 PIAS4 (ENSFCAG00000018666) Panthera ANCESTRAL SPECIES 15 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Tiger MODERN SPECIES 54 SGTA (ENSPTIG00000013472) THOP1 (ENSPTIG00000012118) ZNF554 (ENSPTIG00000011725) ZNF555 (ENSPTIG00000011529) ZNF556 (ENSPTIG00000011070) ENSPTIG00000010576 ENSPTIG00000010278 #8 TLE2 (ENSPTIG00000008843) #9 ENSPTIG00000008105 ##10 ENSPTIG00000007808 #11 GNA15 (ENSPTIG00000006851) #12 CELF5 (ENSPTIG00000005338) NFIC (ENSPTIG00000021743) #15 SMIM24 (ENSPTIG00000021624) #16 FZR1 (ENSPTIG00000021304) #19 HMG20B (ENSPTIG00000021062) #22 GIPC3 (ENSPTIG00000020400) #23 PIP5K1C (ENSPTIG00000018042) #26 MRPL54 (ENSPTIG00000017727) #29 ENSPTIG00000015790 #31 ATCAY (ENSPTIG00000013063) #33 EEF2 (ENSPTIG00000012837) #37 PIAS4 (ENSPTIG00000012378) MAP2K2 (ENSPTIG00000010880) CREB3L3 (ENSPTIG00000008650) SIRT6 (ENSPTIG00000006083) ANKRD24 (ENSPTIG00000021988) EBI3 (ENSPTIG00000021918) YJU2 (ENSPTIG00000021858) SHD (ENSPTIG00000021704) STAP2 (ENSPTIG00000020894) Panthera_a ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a lion MODERN SPECIES 215 NFIC (ENSPLOG00000017082) #15 SMIM24 (ENSPLOG00000017196) #16 FZR1 (ENSPLOG00000017310) #19 TEKTIP1 (ENSPLOG00000017373) #20 MFSD12 (ENSPLOG00000017502) #21 HMG20B (ENSPLOG00000017688) #22 GIPC3 (ENSPLOG00000017768) #23 ENSPLOG00000017823 TBXA2R (ENSPLOG00000017840) #24 CACTIN (ENSPLOG00000017867) #25 PIP5K1C (ENSPLOG00000017958) #26 TJP3 (ENSPLOG00000018107) #27 APBA3 (ENSPLOG00000018465) #28 MRPL54 (ENSPLOG00000018509) #29 RAX2 (ENSPLOG00000018549) #30 MATK (ENSPLOG00000018581) #31 ENSPLOG00000018691 #32 ENSPLOG00000018744 #33 DAPK3 (ENSPLOG00000018794) #36 EEF2 (ENSPLOG00000018886) #37 ENSPLOG00000018935 leopard MODERN SPECIES 134 TLE6 (ENSPPRG00000019807) #8 TLE2 (ENSPPRG00000024121) #9 TLE5 (ENSPPRG00000023990) #10 GNA11 (ENSPPRG00000023842) #11 GNA15 (ENSPPRG00000023476) #12 S1PR4 (ENSPPRG00000014630) NCLN (ENSPPRG00000022717) #13 CELF5 (ENSPPRG00000001514) NFIC (ENSPPRG00000002102) #15 SMIM24 (ENSPPRG00000002813) #16 SMIM44 (ENSPPRG00000003091) #17 DOHH (ENSPPRG00000003295) #18 FZR1 (ENSPPRG00000004528) #19 TEKTIP1 (ENSPPRG00000004778) #20 MFSD12 (ENSPPRG00000005281) #21 HMG20B (ENSPPRG00000005631) #22 GIPC3 (ENSPPRG00000006047) #23 TBXA2R (ENSPPRG00000006108) #24 CACTIN (ENSPPRG00000007007) #25 PIP5K1C (ENSPPRG00000010065) #26 TJP3 (ENSPPRG00000011837) #27 APBA3 (ENSPPRG00000012058) #28 MRPL54 (ENSPPRG00000012325) #29 RAX2 (ENSPPRG00000012460) #30 MATK (ENSPPRG00000017992) #31 ZFR2 (ENSPPRG00000000527) #32 ATCAY (ENSPPRG00000001356) #33 DAPK3 (ENSPPRG00000002025) #36 EEF2 (ENSPPRG00000002841) #37 PIAS4 (ENSPPRG00000002907) ZBTB7A (ENSPPRG00000002971) Laurasiatheria_c ANCESTRAL SPECIES 16 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Chiroptera ANCESTRAL SPECIES 31 ENSGT00940000162830.a.a.b.a #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Megabat MODERN SPECIES 1755 HMG20B (ENSPVAG00000004300) #22 GIPC3 (ENSPVAG00000004301) #23 TBXA2R (ENSPVAG00000004302) #24 CACTIN (ENSPVAG00000004304) #25 Microchiroptera ANCESTRAL SPECIES 30 ENSGT00940000162830.a.a.b.a #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Microbat MODERN SPECIES 1659 FZR1 (ENSMLUG00000003514) #19 MFSD12 (ENSMLUG00000014856) #21 HMG20B (ENSMLUG00000022392) #22 ENSMLUG00000023624 #23 ENSMLUG00000023276 TBXA2R (ENSMLUG00000003517) #24 CACTIN (ENSMLUG00000003521) #25 PIP5K1C (ENSMLUG00000003540) #26 TJP3 (ENSMLUG00000010732) #27 APBA3 (ENSMLUG00000010776) #28 MRPL54 (ENSMLUG00000010801) #29 RAX2 (ENSMLUG00000010808) #30 Greater horseshoe bat MODERN SPECIES 9 TLE6 (ENSRFEG00010008056) #8 TLE2 (ENSRFEG00010007728) #9 TLE5 (ENSRFEG00010007634) #10 GNA11 (ENSRFEG00010007595) #11 GNA15 (ENSRFEG00010007554) #12 S1PR4 (ENSRFEG00010007509) NCLN (ENSRFEG00010021024) #13 ENSRFEG00010020980 #14 NFIC (ENSRFEG00010020868) #15 SMIM24 (ENSRFEG00010020808) #16 SMIM44 (ENSRFEG00010020793) #17 DOHH (ENSRFEG00010020783) #18 FZR1 (ENSRFEG00010020757) #19 TEKTIP1 (ENSRFEG00010020734) #20 MFSD12 (ENSRFEG00010020692) #21 HMG20B (ENSRFEG00010020638) #22 GIPC3 (ENSRFEG00010020593) #23 TBXA2R (ENSRFEG00010020570) #24 CACTIN (ENSRFEG00010020557) #25 PIP5K1C (ENSRFEG00010020492) #26 TJP3 (ENSRFEG00010020437) #27 APBA3 (ENSRFEG00010020395) #28 MRPL54 (ENSRFEG00010020373) #29 RAX2 (ENSRFEG00010020350) #30 MATK (ENSRFEG00010020199) #31 ZFR2 (ENSRFEG00010020171) #32 ATCAY (ENSRFEG00010020101) #33 NMRK2 (ENSRFEG00010020068) #35 DAPK3 (ENSRFEG00010020027) #36 EEF2 (ENSRFEG00010019895) #37 PIAS4 (ENSRFEG00010019828) Equus ANCESTRAL SPECIES 34 ENSGT00950000182755.b.a.a.a.b ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00940000154660.a #16 ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Donkey MODERN SPECIES 12 ENSEASG00005032268 #7 ENSEASG00005036612 #8 TLE2 (ENSEASG00005022082) #9 TLE5 (ENSEASG00005022089) #10 GNA11 (ENSEASG00005030989) #11 GNA15 (ENSEASG00005022106) #12 S1PR4 (ENSEASG00005027401) NCLN (ENSEASG00005022112) #13 ENSEASG00005022118 ENSEASG00005028009 #16 ENSEASG00005022128 #15 ENSEASG00005022139 #18 ENSEASG00005022196 #19 TEKTIP1 (ENSEASG00005036506) #20 MFSD12 (ENSEASG00005022236) #21 HMG20B (ENSEASG00005022241) #22 GIPC3 (ENSEASG00005022246) #23 TBXA2R (ENSEASG00005022250) #24 CACTIN (ENSEASG00005030573) #25 PIP5K1C (ENSEASG00005022261) #26 TJP3 (ENSEASG00005022268) #27 APBA3 (ENSEASG00005022276) #28 MRPL54 (ENSEASG00005022283) #29 RAX2 (ENSEASG00005026320) #30 MATK (ENSEASG00005022288) #31 ZFR2 (ENSEASG00005022296) #32 ATCAY (ENSEASG00005028112) #33 NMRK2 (ENSEASG00005031157) #35 DAPK3 (ENSEASG00005022305) #36 EEF2 (ENSEASG00005022311) #37 PIAS4 (ENSEASG00005022327) Horse MODERN SPECIES 28 ENSECAG00000043845 ENSECAG00000043972 #7 ENSECAG00000001472 TLE6 (ENSECAG00000022366) #8 TLE2 (ENSECAG00000024314) #9 GNA11 (ENSECAG00000023654) #11 S1PR4 (ENSECAG00000001851) NCLN (ENSECAG00000015197) #13 CELF5 (ENSECAG00000018055) ENSECAG00000044034 #16 NFIC (ENSECAG00000008134) #15 DOHH (ENSECAG00000016441) #18 FZR1 (ENSECAG00000016933) #19 TEKTIP1 (ENSECAG00000043412) #20 MFSD12 (ENSECAG00000050601) #21 ENSECAG00000033958 #22 TBXA2R (ENSECAG00000038039) #24 ENSECAG00000051988 CACTIN (ENSECAG00000039454) #25 PIP5K1C (ENSECAG00000033728) #26 APBA3 (ENSECAG00000021308) #28 TJP3 (ENSECAG00000011885) #27 RAX2 (ENSECAG00000027953) #30 MATK (ENSECAG00000057591) #31 ZFR2 (ENSECAG00000007090) #32 ATCAY (ENSECAG00000015094) #33 NMRK2 (ENSECAG00000022841) #35 DAPK3 (ENSECAG00000012570) #36 EEF2 (ENSECAG00000020547) #37 PIAS4 (ENSECAG00000018697) ZBTB7A (ENSECAG00000040226) Artiodactyla ANCESTRAL SPECIES 23 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00390000011698.c.a.c.b ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Suina ANCESTRAL SPECIES 16 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Pig MODERN SPECIES 10 ENSSSCG00000024588 #8 TLE2 (ENSSSCG00000028995) #9 TLE5 (ENSSSCG00000032265) #10 GNA11 (ENSSSCG00000029279) #11 GNA15 (ENSSSCG00000013473) #12 S1PR4 (ENSSSCG00000013474) NCLN (ENSSSCG00000013475) #13 CELF5 (ENSSSCG00000013476) NFIC (ENSSSCG00000036537) #15 ENSSSCG00000038067 #16 SMIM44 (ENSSSCG00000049629) #17 DOHH (ENSSSCG00000013478) #18 FZR1 (ENSSSCG00000013481) #19 TEKTIP1 (ENSSSCG00000056892) #20 MFSD12 (ENSSSCG00000026169) #21 HMG20B (ENSSSCG00000040421) #22 GIPC3 (ENSSSCG00000054746) #23 ENSSSCG00000063127 TBXA2R (ENSSSCG00000033759) #24 CACTIN (ENSSSCG00000032085) #25 ENSSSCG00000050486 PIP5K1C (ENSSSCG00000013490) #26 TJP3 (ENSSSCG00000013491) #27 APBA3 (ENSSSCG00000013492) #28 MRPL54 (ENSSSCG00000024242) #29 RAX2 (ENSSSCG00000032429) #30 MATK (ENSSSCG00000013494) #31 ZFR2 (ENSSSCG00000013495) #32 ATCAY (ENSSSCG00000026754) #33 NMRK2 (ENSSSCG00000040860) #35 DAPK3 (ENSSSCG00000032170) #36 Chacoan peccary MODERN SPECIES 770 ENSCWAG00000008333 #8 TLE2 (ENSCWAG00000008524) #9 TLE5 (ENSCWAG00000009613) #10 GNA11 (ENSCWAG00000009699) #11 GNA15 (ENSCWAG00000009750) #12 S1PR4 (ENSCWAG00000009788) NCLN (ENSCWAG00000009813) #13 CELF5 (ENSCWAG00000009942) NFIC (ENSCWAG00000010134) #15 SMIM24 (ENSCWAG00000010463) #16 SMIM44 (ENSCWAG00000010490) #17 DOHH (ENSCWAG00000010524) #18 FZR1 (ENSCWAG00000010574) #19 TEKTIP1 (ENSCWAG00000010670) #20 MFSD12 (ENSCWAG00000010718) #21 HMG20B (ENSCWAG00000010811) #22 GIPC3 (ENSCWAG00000010858) #23 TBXA2R (ENSCWAG00000010917) #24 CACTIN (ENSCWAG00000010950) #25 PIP5K1C (ENSCWAG00000011001) #26 TJP3 (ENSCWAG00000011084) #27 APBA3 (ENSCWAG00000011492) #28 MRPL54 (ENSCWAG00000011519) #29 RAX2 (ENSCWAG00000011537) #30 MATK (ENSCWAG00000011572) #31 ZFR2 (ENSCWAG00000012053) #32 ATCAY (ENSCWAG00000012401) #33 ENSCWAG00000012584 #35 DAPK3 (ENSCWAG00000012640) #36 EEF2 (ENSCWAG00000012682) #37 PIAS4 (ENSCWAG00000012745) Artiodactyla_a ANCESTRAL SPECIES 24 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00390000011698.c.a.c.b ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Camelidae ANCESTRAL SPECIES 36 ENSGT00940000162830.a.b #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000164119 ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Arabian camel MODERN SPECIES 14 ENSCDRG00005008306 #7 ENSCDRG00005008238 #8 TLE2 (ENSCDRG00005007388) #9 GNA11 (ENSCDRG00005007156) #11 GNA15 (ENSCDRG00005007101) #12 S1PR4 (ENSCDRG00005007083) NCLN (ENSCDRG00005007008) #13 ENSCDRG00005006802 NFIC (ENSCDRG00005006280) #15 SMIM24 (ENSCDRG00005006203) #16 SMIM44 (ENSCDRG00005006180) #17 DOHH (ENSCDRG00005006155) #18 FZR1 (ENSCDRG00005006089) #19 TEKTIP1 (ENSCDRG00005006055) #20 MFSD12 (ENSCDRG00005005999) #21 HMG20B (ENSCDRG00005005967) #22 GIPC3 (ENSCDRG00005005946) #23 TBXA2R (ENSCDRG00005005933) #24 CACTIN (ENSCDRG00005005904) #25 PIP5K1C (ENSCDRG00005005583) #26 TJP3 (ENSCDRG00005005310) #27 APBA3 (ENSCDRG00005005256) #28 MRPL54 (ENSCDRG00005005240) #29 RAX2 (ENSCDRG00005005226) #30 MATK (ENSCDRG00005005153) #31 ZFR2 (ENSCDRG00005005063) #32 ATCAY (ENSCDRG00005005006) #33 NMRK2 (ENSCDRG00005004939) #35 DAPK3 (ENSCDRG00005004913) #36 EEF2 (ENSCDRG00005004859) #37 PIAS4 (ENSCDRG00005004818) Artiodactyla_b ANCESTRAL SPECIES 25 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Cetacea ANCESTRAL SPECIES 1 ENSGT00940000162830.a.b.b #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00950000183005.b.d ENSGT00390000018299.db ENSGT00940000157036 ENSGT00950000183103.d.b ENSGT00940000160463 ENSGT00940000158590 ENSGT00950000185823 Odontoceti ANCESTRAL SPECIES 1 ENSGT00940000162830.a.b.b #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00950000183005.b.d ENSGT00390000018299.db ENSGT00940000157036 ENSGT00950000183103.d.b ENSGT00940000160463 ENSGT00940000158590 ENSGT00950000185823 Sperm whale MODERN SPECIES 188 FZR1 (ENSPCTG00005018099) #19 TEKTIP1 (ENSPCTG00005018208) #20 MFSD12 (ENSPCTG00005018279) #21 HMG20B (ENSPCTG00005018431) #22 GIPC3 (ENSPCTG00005018484) #23 TBXA2R (ENSPCTG00005018572) #24 CACTIN (ENSPCTG00005018599) #25 Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00940000162830.a.b.b #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282.d #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00950000183005.b.d ENSGT00390000018299.db ENSGT00940000157036 ENSGT00950000183103.d.b ENSGT00940000160463 ENSGT00940000158590 ENSGT00940000163280 Dolphin MODERN SPECIES 3262 FZR1 (ENSTTRG00000008758) #19 TEKTIP1 (ENSTTRG00000008798) #20 MFSD12 (ENSTTRG00000008811) #21 HMG20B (ENSTTRG00000008832) #22 Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00940000162830.a.b.b #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282.d #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00950000183005.b.d ENSGT00390000018299.db ENSGT00940000157036 ENSGT00950000183103.d.b ENSGT00940000160463 ENSGT00940000158590 ENSGT00940000163280 Monodontidae ANCESTRAL SPECIES 17 ENSGT00940000162830.a.b.b #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282.d #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00950000183005.b.d ENSGT00390000018299.db ENSGT00940000157036 ENSGT00950000183103.d.b ENSGT00940000160463 ENSGT00940000158590 ENSGT00940000163280 Narwhal MODERN SPECIES 298 ENSMMNG00015001966 ENSMMNG00015001925 #8 TLE2 (ENSMMNG00015001829) #9 TLE5 (ENSMMNG00015001757) #10 GNA11 (ENSMMNG00015001728) #11 GNA15 (ENSMMNG00015001704) #12 S1PR4 (ENSMMNG00015001684) NCLN (ENSMMNG00015001627) #13 CELF5 (ENSMMNG00015001491) NFIC (ENSMMNG00015001309) #15 SMIM24 (ENSMMNG00015001179) #16 DOHH (ENSMMNG00015001138) #18 FZR1 (ENSMMNG00015001082) #19 TEKTIP1 (ENSMMNG00015001041) #20 MFSD12 (ENSMMNG00015000990) #21 HMG20B (ENSMMNG00015000925) #22 GIPC3 (ENSMMNG00015000888) #23 ENSMMNG00015000865 TBXA2R (ENSMMNG00015000841) #24 CACTIN (ENSMMNG00015000805) #25 PIP5K1C (ENSMMNG00015000718) #26 TJP3 (ENSMMNG00015000585) #27 APBA3 (ENSMMNG00015000514) #28 MRPL54 (ENSMMNG00015000490) #29 MBD3 (ENSMMNG00015000454) ENSMMNG00015000426 TCF3 (ENSMMNG00015000337) ENSMMNG00015000241 REXO1 (ENSMMNG00015000180) ENSMMNG00015000140 ENSMMNG00015000114 Beluga whale MODERN SPECIES 62 ENSDLEG00000020344 #9 ENSDLEG00000020351 #9 AES (ENSDLEG00000020354) #10 GNA11 (ENSDLEG00000020358) #11 GNA15 (ENSDLEG00000020362) #12 S1PR4 (ENSDLEG00000020368) NCLN (ENSDLEG00000020375) #13 ENSDLEG00000020390 #14 ENSDLEG00000020396 NFIC (ENSDLEG00000020401) #15 ENSDLEG00000020426 #16 DOHH (ENSDLEG00000020431) #18 FZR1 (ENSDLEG00000020434) #19 ENSDLEG00000015356 #20 MFSD12 (ENSDLEG00000015360) #21 HMG20B (ENSDLEG00000015376) #22 GIPC3 (ENSDLEG00000015384) #23 TBXA2R (ENSDLEG00000015397) #24 CACTIN (ENSDLEG00000015406) #25 PIP5K1C (ENSDLEG00000015428) #26 TJP3 (ENSDLEG00000015460) #27 APBA3 (ENSDLEG00000015494) #28 MRPL54 (ENSDLEG00000015510) #29 MBD3 (ENSDLEG00000015523) ENSDLEG00000015534 TCF3 (ENSDLEG00000015541) ONECUT3 (ENSDLEG00000015601) ENSDLEG00000015609 REXO1 (ENSDLEG00000015623) KLF16 (ENSDLEG00000015688) ABHD17A (ENSDLEG00000015692) Vaquita MODERN SPECIES 14 ENSPSNG00000011693 TLE6 (ENSPSNG00000011672) #8 TLE2 (ENSPSNG00000011350) #9 TLE5 (ENSPSNG00000011246) #10 GNA11 (ENSPSNG00000011201) #11 GNA15 (ENSPSNG00000011159) #12 S1PR4 (ENSPSNG00000011138) NCLN (ENSPSNG00000011058) #13 CELF5 (ENSPSNG00000010809) SMIM24 (ENSPSNG00000010742) #16 NFIC (ENSPSNG00000010514) #15 DOHH (ENSPSNG00000010352) #18 FZR1 (ENSPSNG00000010251) #19 TEKTIP1 (ENSPSNG00000010156) #20 MFSD12 (ENSPSNG00000009980) #21 HMG20B (ENSPSNG00000009908) #22 GIPC3 (ENSPSNG00000009792) #23 ENSPSNG00000009640 TBXA2R (ENSPSNG00000019240) #24 CACTIN (ENSPSNG00000019192) #25 PIP5K1C (ENSPSNG00000019044) #26 TJP3 (ENSPSNG00000018690) #27 APBA3 (ENSPSNG00000018571) #28 MRPL54 (ENSPSNG00000018508) #29 MBD3 (ENSPSNG00000018406) TCF3 (ENSPSNG00000018208) ONECUT3 (ENSPSNG00000018126) REXO1 (ENSPSNG00000018002) KLF16 (ENSPSNG00000017960) ENSPSNG00000017887 ADAT3 (ENSPSNG00000017868) Blue whale MODERN SPECIES 14 ENSBMSG00010007140 #7 ENSBMSG00010007156 ENSBMSG00010007176 #8 TLE2 (ENSBMSG00010007244) #9 TLE5 (ENSBMSG00010007577) #10 GNA11 (ENSBMSG00010007614) #11 GNA15 (ENSBMSG00010007638) #12 S1PR4 (ENSBMSG00010007650) NCLN (ENSBMSG00010007666) #13 CELF5 (ENSBMSG00010007695) NFIC (ENSBMSG00010007764) #15 ENSBMSG00010007983 #16 DOHH (ENSBMSG00010008048) #18 FZR1 (ENSBMSG00010008072) #19 MFSD12 (ENSBMSG00010008150) #21 HMG20B (ENSBMSG00010008175) #22 GIPC3 (ENSBMSG00010008191) #23 TBXA2R (ENSBMSG00010008203) #24 CACTIN (ENSBMSG00010008209) #25 PIP5K1C (ENSBMSG00010008234) #26 TJP3 (ENSBMSG00010008320) #27 APBA3 (ENSBMSG00010008350) #28 MRPL54 (ENSBMSG00010008367) #29 MBD3 (ENSBMSG00010008380) TCF3 (ENSBMSG00010008426) ONECUT3 (ENSBMSG00010008489) ATP8B3 (ENSBMSG00010008534) REXO1 (ENSBMSG00010008687) ENSBMSG00010008713 SCAMP4 (ENSBMSG00010008730) CSNK1G2 (ENSBMSG00010008746) Pecora ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 29 DRD5 (ENSCHYG00000020974) OTOP1 (ENSCHYG00000020927) TMEM128 (ENSCHYG00000020873) LYAR (ENSCHYG00000020808) ZBTB49 (ENSCHYG00000020730) ENSCHYG00000020601 ENSCHYG00000020468 MSX1 (ENSCHYG00000020422) CYTL1 (ENSCHYG00000020364) STK32B (ENSCHYG00000020103) EVC2 (ENSCHYG00000019186) EVC (ENSCHYG00000019037) CRMP1 (ENSCHYG00000018819) ENSCHYG00000018775 JAKMIP1 (ENSCHYG00000018225) ENSCHYG00000018159 #22 WFS1 (ENSCHYG00000018113) PPP2R2C (ENSCHYG00000017967) ENSCHYG00000017283 ENSCHYG00000016162 DMP1 (ENSCHYG00000015748) ENSCHYG00000015331 SPARCL1 (ENSCHYG00000015173) ENSCHYG00000014882 ENSCHYG00000014859 HSD17B11 (ENSCHYG00000014635) HSD17B13 (ENSCHYG00000014556) KLHL8 (ENSCHYG00000014019) AFF1 (ENSCHYG00000013429) C4orf36 (ENSCHYG00000013363) SLC10A6 (ENSCHYG00000013255) Yarkand deer MODERN SPECIES 32 ENSCHYG00000004218 #7 TLE6 (ENSCHYG00000004189) #8 ENSCHYG00000004147 #9 ENSCHYG00000004111 ##10 GNA11 (ENSCHYG00000004093) #11 GNA15 (ENSCHYG00000004083) #12 S1PR4 (ENSCHYG00000004078) NCLN (ENSCHYG00000004043) #13 CELF5 (ENSCHYG00000004001) NFIC (ENSCHYG00000003885) #15 SMIM24 (ENSCHYG00000003795) #16 ENSCHYG00000003765 #18 FZR1 (ENSCHYG00000003667) #19 ENSCHYG00000003615 #20 MFSD12 (ENSCHYG00000003571) #21 HMG20B (ENSCHYG00000003538) #22 GIPC3 (ENSCHYG00000003521) #23 TBXA2R (ENSCHYG00000003508) #24 CACTIN (ENSCHYG00000003483) #25 PIP5K1C (ENSCHYG00000003264) #26 TJP3 (ENSCHYG00000003169) #27 APBA3 (ENSCHYG00000003126) #28 RAX2 (ENSCHYG00000003107) #30 MATK (ENSCHYG00000003016) #31 MRPL54 (ENSCHYG00000002977) #29 ZFR2 (ENSCHYG00000002949) #32 ATCAY (ENSCHYG00000002905) #33 NMRK2 (ENSCHYG00000002878) #35 DAPK3 (ENSCHYG00000002848) #36 ENSCHYG00000002813 #37 PIAS4 (ENSCHYG00000002769) Percora_a ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 Siberian musk deer MODERN SPECIES 99 TLE2 (ENSMMSG00000000627) #9 TLE5 (ENSMMSG00000000569) #10 GNA11 (ENSMMSG00000000551) #11 GNA15 (ENSMMSG00000000532) #12 S1PR4 (ENSMMSG00000000524) NCLN (ENSMMSG00000000514) #13 CELF5 (ENSMMSG00000000449) NFIC (ENSMMSG00000000253) #15 ENSMMSG00000000182 SMIM44 (ENSMMSG00000000172) #17 ENSMMSG00000000156 DOHH (ENSMMSG00000000141) #18 FZR1 (ENSMMSG00000000085) #19 TEKTIP1 (ENSMMSG00000000060) #20 MFSD12 (ENSMMSG00000000043) #21 HMG20B (ENSMMSG00000000025) #22 GIPC3 (ENSMMSG00000023147) #23 TBXA2R (ENSMMSG00000023142) #24 ENSMMSG00000023139 CACTIN (ENSMMSG00000023129) #25 PIP5K1C (ENSMMSG00000023101) #26 TJP3 (ENSMMSG00000023025) #27 APBA3 (ENSMMSG00000023004) #28 MRPL54 (ENSMMSG00000022990) #29 RAX2 (ENSMMSG00000022983) #30 MATK (ENSMMSG00000022958) #31 ZFR2 (ENSMMSG00000022940) #32 ATCAY (ENSMMSG00000022923) #33 NMRK2 (ENSMMSG00000022912) #35 DAPK3 (ENSMMSG00000022904) #36 EEF2 (ENSMMSG00000022885) #37 Bovidae ANCESTRAL SPECIES ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Caprinae ANCESTRAL SPECIES 3 ENSGT00940000162830.a.b #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01030000234539.a.a.a Rambouillet Sheep MODERN SPECIES 21 ENSOARG00020021357 ENSOARG00020021289 #8 TLE2 (ENSOARG00020020198) #9 TLE5 (ENSOARG00020020135) #10 GNA11 (ENSOARG00020020092) #11 GNA15 (ENSOARG00020020045) #12 S1PR4 (ENSOARG00020020029) NCLN (ENSOARG00020019971) #13 CELF5 (ENSOARG00020019796) NFIC (ENSOARG00020019406) #15 SMIM24 (ENSOARG00020019336) #16 DOHH (ENSOARG00020019251) #18 FZR1 (ENSOARG00020019125) #19 TEKTIP1 (ENSOARG00020019053) #20 MFSD12 (ENSOARG00020018933) #21 HMG20B (ENSOARG00020018879) #22 GIPC3 (ENSOARG00020018810) #23 TBXA2R (ENSOARG00020018783) #24 CACTIN (ENSOARG00020018654) #25 PIP5K1C (ENSOARG00020017829) #26 TJP3 (ENSOARG00020017288) #27 APBA3 (ENSOARG00020017206) #28 MRPL54 (ENSOARG00020017174) #29 RAX2 (ENSOARG00020017140) #30 MATK (ENSOARG00020017085) #31 ZFR2 (ENSOARG00020016870) #32 ATCAY (ENSOARG00020016696) #33 ENSOARG00020016636 #35 DAPK3 (ENSOARG00020016591) #36 EEF2 (ENSOARG00020016508) #37 PIAS4 (ENSOARG00020016478) Goat DUPLICATION Goat MODERN SPECIES 25 DRD5 (ENSCHIG00000008414) OTOP1 (ENSCHIG00000019597) TMEM128 (ENSCHIG00000011114) LYAR (ENSCHIG00000020398) ZBTB49 (ENSCHIG00000015069) NSG1 (ENSCHIG00000008294) STX18 (ENSCHIG00000020439) MSX1 (ENSCHIG00000014094) CYTL1 (ENSCHIG00000001722) STK32B (ENSCHIG00000021477) EVC2 (ENSCHIG00000014543) EVC (ENSCHIG00000024455) CRMP1 (ENSCHIG00000017354) ENSCHIG00000008410 JAKMIP1 (ENSCHIG00000022605) ENSCHIG00000014433 #22 WFS1 (ENSCHIG00000025731) PPP2R2C (ENSCHIG00000016344) DMP1 (ENSCHIG00000024137) DSPP (ENSCHIG00000016631) SPARCL1 (ENSCHIG00000007139) NUDT9 (ENSCHIG00000020346) HSD17B11 (ENSCHIG00000011780) HSD17B13 (ENSCHIG00000020775) KLHL8 (ENSCHIG00000015495) AFF1 (ENSCHIG00000008450) C4orf36 (ENSCHIG00000020322) SLC10A6 (ENSCHIG00000014126) ENSCHIG00000001076 PTPN13 (ENSCHIG00000021006) ENSCHIG00000013818 Goat MODERN SPECIES 26 ENSCHIG00000011999 #7 TLE6 (ENSCHIG00000018660) #8 TLE2 (ENSCHIG00000026991) #9 TLE5 (ENSCHIG00000012967) #10 GNA11 (ENSCHIG00000012068) #11 GNA15 (ENSCHIG00000006621) #12 S1PR4 (ENSCHIG00000012284) NCLN (ENSCHIG00000021992) #13 CELF5 (ENSCHIG00000004008) NFIC (ENSCHIG00000015364) #15 SMIM24 (ENSCHIG00000016053) #16 DOHH (ENSCHIG00000023284) #18 FZR1 (ENSCHIG00000014824) #19 MFSD12 (ENSCHIG00000024505) #21 TEKTIP1 (ENSCHIG00000012701) #20 HMG20B (ENSCHIG00000023604) #22 GIPC3 (ENSCHIG00000018804) #23 TBXA2R (ENSCHIG00000012747) #24 CACTIN (ENSCHIG00000026750) #25 PIP5K1C (ENSCHIG00000022491) #26 TJP3 (ENSCHIG00000017841) #27 APBA3 (ENSCHIG00000014574) #28 MRPL54 (ENSCHIG00000026538) #29 RAX2 (ENSCHIG00000020868) #30 MATK (ENSCHIG00000014576) #31 ZFR2 (ENSCHIG00000024368) #32 ATCAY (ENSCHIG00000026683) #33 NMRK2 (ENSCHIG00000008917) #35 DAPK3 (ENSCHIG00000018026) #36 ENSCHIG00000013910 #37 PIAS4 (ENSCHIG00000015352) Bovinae ANCESTRAL SPECIES 2 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00960000187413 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 American bison MODERN SPECIES 3349 TLE2 (ENSBBBG00000023745) #9 TLE5 (ENSBBBG00000023655) #10 GNA11 (ENSBBBG00000006176) #11 GNA15 (ENSBBBG00000006167) #12 S1PR4 (ENSBBBG00000023601) NCLN (ENSBBBG00000023582) #13 ENSBBBG00000008686 #14 NFIC (ENSBBBG00000023432) #15 SMIM24 (ENSBBBG00000023341) #16 SMIM44 (ENSBBBG00000023332) #17 DOHH (ENSBBBG00000008411) #18 ENSBBBG00000023317 FZR1 (ENSBBBG00000023304) #19 TEKTIP1 (ENSBBBG00000023231) #20 MFSD12 (ENSBBBG00000023220) #21 HMG20B (ENSBBBG00000023190) #22 GIPC3 (ENSBBBG00000000334) #23 TBXA2R (ENSBBBG00000000372) #24 CACTIN (ENSBBBG00000000388) #25 PIP5K1C (ENSBBBG00000000451) #26 TJP3 (ENSBBBG00000023169) #27 APBA3 (ENSBBBG00000006868) #28 MRPL54 (ENSBBBG00000023057) #29 RAX2 (ENSBBBG00000008182) #30 MATK (ENSBBBG00000023026) #31 ENSBBBG00000023003 #32 ATCAY (ENSBBBG00000022991) #33 ENSBBBG00000006028 #35 DAPK3 (ENSBBBG00000022951) #36 EEF2 (ENSBBBG00000022915) #37 ENSBBBG00000022877 Bos ANCESTRAL SPECIES 3 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00960000187413 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Bos_a ANCESTRAL SPECIES 2 ENSGT00940000162830.a.b #7 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 ENSGT01100000263504.a.b.a.b.a.b.ib Domestic yak MODERN SPECIES 27 TLE6 (ENSBGRG00000001034) #8 TLE2 (ENSBGRG00000000857) #9 TLE5 (ENSBGRG00000000793) #10 GNA11 (ENSBGRG00000000769) #11 GNA15 (ENSBGRG00000000748) #12 S1PR4 (ENSBGRG00000000735) NCLN (ENSBGRG00000000641) #13 CELF5 (ENSBGRG00000000565) ENSBGRG00000000535 #15 ENSBGRG00000000421 #15 ENSBGRG00000000370 #16 DOHH (ENSBGRG00000021664) #18 FZR1 (ENSBGRG00000021298) #19 TEKTIP1 (ENSBGRG00000021216) #20 MFSD12 (ENSBGRG00000021107) #21 HMG20B (ENSBGRG00000021064) #22 GIPC3 (ENSBGRG00000021004) #23 TBXA2R (ENSBGRG00000020972) #24 CACTIN (ENSBGRG00000020942) #25 PIP5K1C (ENSBGRG00000020521) #26 TJP3 (ENSBGRG00000019950) #27 APBA3 (ENSBGRG00000019857) #28 MRPL54 (ENSBGRG00000019811) #29 RAX2 (ENSBGRG00000019785) #30 MATK (ENSBGRG00000019523) #31 ZFR2 (ENSBGRG00000019327) #32 ATCAY (ENSBGRG00000019249) #33 NMRK2 (ENSBGRG00000019172) #35 DAPK3 (ENSBGRG00000019101) #36 EEF2 (ENSBGRG00000018816) #37 ENSBGRG00000018795 Wild yak MODERN SPECIES 3193 ENSBMUG00000010976 #22 Bos_b ANCESTRAL SPECIES 2 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161033 #11 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000185200 ENSGT00950000182916.a.a #15 ENSGT00950000185935 ENSGT00940000154660.a #16 ENSGT00500000044957 #18 ENSGT00960000187413 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Hybrid Bos Indicus MODERN SPECIES 26 TLE6 (ENSBIXG00005002519) #8 TLE2 (ENSBIXG00005015910) #9 TLE5 (ENSBIXG00005015803) #10 GNA11 (ENSBIXG00005002462) #11 GNA15 (ENSBIXG00005002453) #12 S1PR4 (ENSBIXG00005015709) NCLN (ENSBIXG00005002433) #13 NFIC (ENSBIXG00005002308) #15 ENSBIXG00005015296 SMIM24 (ENSBIXG00005015291) #16 DOHH (ENSBIXG00005015281) #18 ENSBIXG00005015258 FZR1 (ENSBIXG00005006231) #19 TEKTIP1 (ENSBIXG00005015154) #20 MFSD12 (ENSBIXG00005015129) #21 HMG20B (ENSBIXG00005015091) #22 GIPC3 (ENSBIXG00005002213) #23 TBXA2R (ENSBIXG00005015046) #24 CACTIN (ENSBIXG00005002202) #25 PIP5K1C (ENSBIXG00005014985) #26 TJP3 (ENSBIXG00005002143) #27 APBA3 (ENSBIXG00005005496) #28 MRPL54 (ENSBIXG00005014674) #29 RAX2 (ENSBIXG00005014658) #30 MATK (ENSBIXG00005014627) #31 ZFR2 (ENSBIXG00005007010) #32 ATCAY (ENSBIXG00005006129) #33 NMRK2 (ENSBIXG00005014431) #35 ENSBIXG00005001922 #37 PIAS4 (ENSBIXG00005014272) ZBTB7A (ENSBIXG00005007496) Cow DUPLICATION Cow MODERN SPECIES 26 DBN1 (ENSBTAG00000011400) PRR7 (ENSBTAG00000011398) GRK6 (ENSBTAG00000043994) F12 (ENSBTAG00000018872) PFN3 (ENSBTAG00000020353) SLC34A1 (ENSBTAG00000020351) RGS14 (ENSBTAG00000008497) LMAN2 (ENSBTAG00000008034) MXD3 (ENSBTAG00000005010) PRELID1 (ENSBTAG00000005009) RAB24 (ENSBTAG00000025425) NSD1 (ENSBTAG00000025426) FGFR4 (ENSBTAG00000010543) ZNF346 (ENSBTAG00000010541) ENSBTAG00000051478 ENSBTAG00000010020 #22 UIMC1 (ENSBTAG00000001707) HK3 (ENSBTAG00000014898) UNC5A (ENSBTAG00000014897) TSPAN17 (ENSBTAG00000017451) EIF4E1B (ENSBTAG00000003103) SNCB (ENSBTAG00000009803) GPRIN1 (ENSBTAG00000044035) CDHR2 (ENSBTAG00000025340) RNF44 (ENSBTAG00000017748) FAF2 (ENSBTAG00000017744) CLTB (ENSBTAG00000010740) HIGD2A (ENSBTAG00000010735) NOP16 (ENSBTAG00000010734) ARL10 (ENSBTAG00000025345) COMMD10 (ENSBTAG00000019071) Cow MODERN SPECIES 26 GNA15 (ENSBTAG00000019988) #12 S1PR4 (ENSBTAG00000000381) NCLN (ENSBTAG00000020759) #13 CELF5 (ENSBTAG00000021774) ENSBTAG00000054212 ENSBTAG00000051439 ENSBTAG00000049701 NFIC (ENSBTAG00000008520) #15 ENSBTAG00000054259 SMIM24 (ENSBTAG00000031383) #16 DOHH (ENSBTAG00000005272) #18 ENSBTAG00000051400 FZR1 (ENSBTAG00000031387) #19 TEKTIP1 (ENSBTAG00000014982) #20 MFSD12 (ENSBTAG00000014979) #21 HMG20B (ENSBTAG00000008789) #22 GIPC3 (ENSBTAG00000050809) #23 ENSBTAG00000053812 TBXA2R (ENSBTAG00000014944) #24 CACTIN (ENSBTAG00000010373) #25 PIP5K1C (ENSBTAG00000000710) #26 TJP3 (ENSBTAG00000018342) #27 APBA3 (ENSBTAG00000008395) #28 MRPL54 (ENSBTAG00000008396) #29 RAX2 (ENSBTAG00000009750) #30 MATK (ENSBTAG00000006619) #31 ZFR2 (ENSBTAG00000000755) #32 ATCAY (ENSBTAG00000018375) #33 NMRK2 (ENSBTAG00000031573) #35 DAPK3 (ENSBTAG00000020417) #36 EEF2 (ENSBTAG00000004258) #37 Atlantogenata ANCESTRAL SPECIES 79 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161736 #12 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Afrotheria ANCESTRAL SPECIES 97 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161736 #12 ENSGT00940000161033 #11 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Afrotheria_a ANCESTRAL SPECIES 101 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT01030000234519.e.a.a.b.a.a.b.a.a #9 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #10 ENSGT00940000161736 #12 ENSGT00940000161033 #11 ENSGT01050000244887.B ENSGT00500000044945.a #13 ENSGT00940000154201.a.a.b.d ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00390000003403 #17 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT00730000111899 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.A.a #25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163572 #30 ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Elephant MODERN SPECIES 60 ENSLAFG00000022423 #8 TLE2 (ENSLAFG00000007679) #9 GNA11 (ENSLAFG00000011237) #11 S1PR4 (ENSLAFG00000000780) NCLN (ENSLAFG00000028713) #13 CELF5 (ENSLAFG00000026387) NFIC (ENSLAFG00000007134) #15 ENSLAFG00000029999 SMIM44 (ENSLAFG00000026671) #17 DOHH (ENSLAFG00000011920) #18 FZR1 (ENSLAFG00000029400) #19 TEKTIP1 (ENSLAFG00000032270) #20 MFSD12 (ENSLAFG00000031512) #21 HMG20B (ENSLAFG00000007845) #22 GIPC3 (ENSLAFG00000007849) #23 ENSLAFG00000030325 TBXA2R (ENSLAFG00000027874) #24 ENSLAFG00000031774 #25 PIP5K1C (ENSLAFG00000022484) #26 TJP3 (ENSLAFG00000027222) #27 APBA3 (ENSLAFG00000015080) #28 MRPL54 (ENSLAFG00000029657) #29 MATK (ENSLAFG00000022360) #31 ZFR2 (ENSLAFG00000020813) #32 ATCAY (ENSLAFG00000012399) #33 NMRK2 (ENSLAFG00000031525) #35 DAPK3 (ENSLAFG00000029621) #36 EEF2 (ENSLAFG00000009159) #37 PIAS4 (ENSLAFG00000009166) Hyrax MODERN SPECIES 4344 HMG20B (ENSPCAG00000010772) #22 GIPC3 (ENSPCAG00000010861) #23 TBXA2R (ENSPCAG00000010953) #24 CACTIN (ENSPCAG00000011001) #25 Marsupialia ANCESTRAL SPECIES 1 ENSGT00390000012198 ENSGT00410000025695.a ENSGT00390000012913.a ENSGT00940000160926 ENSGT00940000158649 ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00390000001450.h.a.b.b ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 ENSGT00940000161753 #36 ENSGT00940000154662 #37 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00390000012198 ENSGT00410000025695.a ENSGT00390000012913.a ENSGT00940000160926 ENSGT00940000158649 ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00390000001450.h.a.b.b ENSGT00940000154650.d.f.d.a.a ENSGT00950000182890.D.c.b.a.a.b.a.a.a ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 Diprotodontia ANCESTRAL SPECIES 20 ENSGT00390000012198 ENSGT00410000025695.a ENSGT00390000012913.a ENSGT00940000160926 ENSGT00940000158649 ENSGT00390000017748 ENSGT00940000160753 ENSGT00390000014856 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00390000001450.h.a.b.b ENSGT00940000154650.d.f.d.a.a ENSGT00950000182890.D.c.b.a.a.b.a.a.a ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 Diprotodontia_a ANCESTRAL SPECIES 16 ENSGT00390000012198 ENSGT00410000025695.a ENSGT00390000012913.a ENSGT00940000160926 ENSGT00940000158649 ENSGT00390000017748 ENSGT00940000160753.a ENSGT00390000014856 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01000000216439 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00390000001450.h.a.b.b ENSGT00940000154650.d.f.d.a.a ENSGT00950000182890.D.c.b.a.a.b.a.a.a ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000158364 #33 ENSGT00940000159842 #35 koala MODERN SPECIES 190 MAU2 (ENSPCIG00000024186) SUGP1 (ENSPCIG00000031015) TM6SF2 (ENSPCIG00000024217) HAPLN4 (ENSPCIG00000024218) NCAN (ENSPCIG00000024219) NR2C2AP (ENSPCIG00000024227) ENSPCIG00000024222 BORCS8 (ENSPCIG00000024230) ENSPCIG00000024267 ENSPCIG00000025322 #15 ENSPCIG00000033895 DOHH (ENSPCIG00000025326) #18 FZR1 (ENSPCIG00000025330) #19 ENSPCIG00000033355 #20 MFSD12 (ENSPCIG00000025337) #21 HMG20B (ENSPCIG00000025343) #22 GIPC3 (ENSPCIG00000025355) #23 TBXA2R (ENSPCIG00000025359) #24 ENSPCIG00000025362 ##25 ENSPCIG00000025367 #26 ENSPCIG00000035426 ENSPCIG00000014668 ENSPCIG00000032694 Common wonbat MODERN SPECIES 580 TSSK6 (ENSVURG00010024835) GATAD2A (ENSVURG00010024834) SUGP1 (ENSVURG00010024831) TM6SF2 (ENSVURG00010024830) HAPLN4 (ENSVURG00010024829) ENSVURG00010024827 ENSVURG00010024825 RFXANK (ENSVURG00010024824) BORCS8 (ENSVURG00010024823) ENSVURG00010024799 ENSVURG00010024784 #15 DOHH (ENSVURG00010024782) #18 FZR1 (ENSVURG00010024780) #19 TEKTIP1 (ENSVURG00010024778) #20 MFSD12 (ENSVURG00010024773) #21 HMG20B (ENSVURG00010024769) #22 GIPC3 (ENSVURG00010024764) #23 TBXA2R (ENSVURG00010024759) #24 ENSVURG00010024755 ##25 PIP5K1C (ENSVURG00010024749) #26 ENSVURG00010024743 ENSVURG00010024741 ENSVURG00010024739 ENSVURG00010024737 TJP3 (ENSVURG00010024727) #27 APBA3 (ENSVURG00010024720) #28 MRPL54 (ENSVURG00010024716) #29 ENSVURG00010024713 MATK (ENSVURG00010024711) #31 ZFR2 (ENSVURG00010024701) #32 ATCAY (ENSVURG00010024696) #33 Wallaby MODERN SPECIES 6291 HMG20B (ENSMEUG00000001270) #22 GIPC3 (ENSMEUG00000001281) #23 Tasmanian devil MODERN SPECIES TSSK6 (ENSSHAG00000001334) NDUFA13 (ENSSHAG00000031151) GATAD2A (ENSSHAG00000013178) MAU2 (ENSSHAG00000012602) SUGP1 (ENSSHAG00000012361) TM6SF2 (ENSSHAG00000012199) HAPLN4 (ENSSHAG00000012102) ENSSHAG00000011784 ENSSHAG00000026063 ENSSHAG00000031648 ENSSHAG00000010759 ENSSHAG00000008822 #15 DOHH (ENSSHAG00000008794) #18 FZR1 (ENSSHAG00000007954) #19 MFSD12 (ENSSHAG00000007626) #21 HMG20B (ENSSHAG00000007226) #22 TBXA2R (ENSSHAG00000006677) #24 ENSSHAG00000006050 ##25 PIP5K1C (ENSSHAG00000004499) #26 ENSSHAG00000027582 ENSSHAG00000030933 ENSSHAG00000030563 ENSSHAG00000024272 TJP3 (ENSSHAG00000001439) #27 APBA3 (ENSSHAG00000002223) #28 MRPL54 (ENSSHAG00000002557) #29 ENSSHAG00000003118 MATK (ENSSHAG00000003362) #31 ENSSHAG00000004724 #32 ATCAY (ENSSHAG00000006184) #33 ENSSHAG00000030604 #35 Opossum MODERN SPECIES 2 GATAD2A (ENSMODG00000007189) MAU2 (ENSMODG00000007162) SUGP1 (ENSMODG00000007089) TM6SF2 (ENSMODG00000007077) HAPLN4 (ENSMODG00000007055) ENSMODG00000028358 NR2C2AP (ENSMODG00000047700) RFXANK (ENSMODG00000007002) BORCS8 (ENSMODG00000006986) ENSMODG00000006976 NFIC (ENSMODG00000006935) #15 DOHH (ENSMODG00000006927) #18 FZR1 (ENSMODG00000006919) #19 ENSMODG00000047578 #20 MFSD12 (ENSMODG00000006897) #21 HMG20B (ENSMODG00000006884) #22 ENSMODG00000006869 #23 TBXA2R (ENSMODG00000006844) #24 ENSMODG00000006837 ##25 ENSMODG00000006823 #26 ENSMODG00000050748 ENSMODG00000023793 ENSMODG00000023794 ENSMODG00000006773 ENSMODG00000046640 ENSMODG00000045793 ENSMODG00000023795 ENSMODG00000028680 monDomV1R1220 (ENSMODG00000039528) monDomV1R1219 (ENSMODG00000047743) DNASE2 (ENSMODG00000011483) Platypus MODERN SPECIES 85 REXO1 (ENSOANG00000036110) ENSOANG00000014921 ONECUT3 (ENSOANG00000004576) TCF3 (ENSOANG00000014335) UQCR11 (ENSOANG00000003834) ENSOANG00000003672 MEX3D (ENSOANG00000011764) ENSOANG00000037185 ENSOANG00000046986 NFIC (ENSOANG00000042636) #15 ENSOANG00000043849 DOHH (ENSOANG00000041341) #18 FZR1 (ENSOANG00000007656) #19 ENSOANG00000015682 #20 ENSOANG00000014325 #21 HMG20B (ENSOANG00000013515) #22 TBXA2R (ENSOANG00000037569) #24 PIP5K1C (ENSOANG00000006295) #26 TJP3 (ENSOANG00000006294) #27 APBA3 (ENSOANG00000006293) #28 ENSOANG00000037708 #29 MATK (ENSOANG00000010674) #31 ENSOANG00000011220 #32 ATCAY (ENSOANG00000006292) #33 NMRK2 (ENSOANG00000035130) #35 DAPK3 (ENSOANG00000003319) #36 ENSOANG00000014032 #37 PIAS4 (ENSOANG00000031620) ZBTB7A (ENSOANG00000045647) MAP2K2 (ENSOANG00000045918) CREB3L3 (ENSOANG00000013246) Sauria ANCESTRAL SPECIES 20 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000162148 #32 Lepidosauria ANCESTRAL SPECIES 33 ENSGT00940000155505.b ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b Episquamata ANCESTRAL SPECIES 18 ENSGT00940000162255 ENSGT00390000003821 ENSGT00390000015467 ENSGT00940000160899 ENSGT00940000157113 ENSGT00940000161721 ENSGT00390000013841 ENSGT00950000183110.b.a ENSGT00940000154355 ENSGT00940000161439 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT00950000183102.B ##25 ENSGT01030000234559.a.a.a #24 ENSGT00390000003420.b #23 ENSGT00940000161213 #22 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000165304 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00940000155854 ENSGT00940000163280 ENSGT00950000185823 ENSGT00940000158590 ENSGT00940000155505.b ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 Laterata ANCESTRAL SPECIES 37 ENSGT00940000162255 ENSGT00390000003821 ENSGT00390000015467 ENSGT00940000160899 ENSGT00940000157113 ENSGT00940000161721 ENSGT00390000013841 ENSGT00950000183110.b.a ENSGT00940000154355 ENSGT00940000161439 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT00950000183102.B ##25 ENSGT01030000234559.a.a.a #24 ENSGT00390000003420.b #23 ENSGT00940000161213 #22 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000165304 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00940000155854 ENSGT00940000163280 ENSGT00940000158590 ENSGT00940000160463.e ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT01000000214836 ENSGT00950000183005.b.d Argentine black and white tegu MODERN SPECIES 106 ENSSMRG00000010566 ENSSMRG00000010565 CILP2 (ENSSMRG00000010564) ENSSMRG00000010563 ##25 TBXA2R (ENSSMRG00000010562) #24 ENSSMRG00000010561 #23 HMG20B (ENSSMRG00000010560) #22 FZR1 (ENSSMRG00000010558) #19 TEKTIP1 (ENSSMRG00000010556) #20 ENSSMRG00000010554 MFSD12 (ENSSMRG00000010553) #21 ENSSMRG00000010551 ENSSMRG00000010549 ENSSMRG00000004021 NFIC (ENSSMRG00000004004) #15 ABHD17A (ENSSMRG00000004000) KLF16 (ENSSMRG00000003993) REXO1 (ENSSMRG00000003986) ENSSMRG00000003975 ENSSMRG00000003970 ENSSMRG00000003958 ONECUT3 (ENSSMRG00000003944) Common wall lizard MODERN SPECIES 9 RNF126 (ENSPMRG00000020338) FGF22 (ENSPMRG00000020360) ENSPMRG00000020365 ENSPMRG00000020409 ENSPMRG00000020688 ENSPMRG00000020753 ENSPMRG00000020989 ENSPMRG00000020995 ENSPMRG00000021011 ENSPMRG00000021017 ENSPMRG00000021037 CILP2 (ENSPMRG00000021078) ENSPMRG00000021092 ##25 TBXA2R (ENSPMRG00000021117) #24 ENSPMRG00000021124 #23 HMG20B (ENSPMRG00000021128) #22 FZR1 (ENSPMRG00000021144) #19 ENSPMRG00000021159 DOHH (ENSPMRG00000021166) #18 ENSPMRG00000021682 NFIC (ENSPMRG00000023298) #15 ABHD17A (ENSPMRG00000023302) ENSPMRG00000023304 REXO1 (ENSPMRG00000023316) ATP8B3 (ENSPMRG00000023348) ONECUT3 (ENSPMRG00000023379) TCF3 (ENSPMRG00000023382) ENSPMRG00000023385 MBD3 (ENSPMRG00000023387) MEX3D (ENSPMRG00000023388) ENSPMRG00000023392 Toxicofera ANCESTRAL SPECIES 31 ENSGT00940000160280 ENSGT00940000162255 ENSGT00390000003821 ENSGT00390000015467 ENSGT00940000160899 ENSGT00940000157113 ENSGT00940000161721 ENSGT00390000013841 ENSGT00950000183110.b.a ENSGT00940000154355 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT00950000183102.B ##25 ENSGT01030000234559.a.a.a #24 ENSGT00390000003420.b #23 ENSGT00940000161213 #22 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000165304 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00940000155854 ENSGT00940000163280 ENSGT00950000185823 ENSGT00940000158590 ENSGT00940000155505.b ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00950000183005.b.c Elapidae ANCESTRAL SPECIES 3 ENSGT00940000160280 ENSGT00940000162255 ENSGT00390000003821 ENSGT00390000015467 ENSGT00940000160899 ENSGT00940000157113 ENSGT00940000161721 ENSGT00390000013841 ENSGT00950000183110.b.a ENSGT00940000154355 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT00950000183102.B ##25 ENSGT01030000234559.a.a.a #24 ENSGT00390000003420.b #23 ENSGT00940000161213 #22 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00960000190694 ENSGT00940000165304 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00940000155854 ENSGT00940000163280 ENSGT00950000185823 ENSGT00940000158590 ENSGT00940000155505.b ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 Elapidae_a ANCESTRAL SPECIES 10 ENSGT00940000160280 ENSGT00940000162255 ENSGT00390000003821 ENSGT00390000015467 ENSGT00940000160899 ENSGT00940000157113 ENSGT00940000161721 ENSGT00390000013841 ENSGT00950000183110.b.a ENSGT00940000154355 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT00950000183102.B ##25 ENSGT01030000234559.a.a.a #24 ENSGT00390000003420.b #23 ENSGT00940000161213 #22 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00960000190694 ENSGT00940000165304 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00940000155854 ENSGT00940000163280 ENSGT00950000185823 ENSGT00940000158590 ENSGT00940000155505.b ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 Acanthophiinae ANCESTRAL SPECIES 13 ENSGT00940000160280 ENSGT00940000162255 ENSGT00390000003821 ENSGT00390000015467 ENSGT00940000160899 ENSGT00940000157113 ENSGT00940000161721 ENSGT00390000013841 ENSGT00950000183110.b.a ENSGT00940000154355 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT00950000183102.B ##25 ENSGT01030000234559.a.a.a #24 ENSGT00390000003420.b #23 ENSGT00940000161213 #22 ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00960000190694 ENSGT00940000165304 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00940000155854 ENSGT00940000163280 ENSGT00950000185823 ENSGT00940000158590 ENSGT00940000155505.b ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 Mainland tiger snake MODERN SPECIES 35 ENSNSUG00000016910 ENSNSUG00000016911 R3HDM4 (ENSNSUG00000016920) ENSNSUG00000016922 ARID3A (ENSNSUG00000016923) RNF126 (ENSNSUG00000016924) FGF22 (ENSNSUG00000016925) POLR2E (ENSNSUG00000016926) ARHGAP45 (ENSNSUG00000016927) CNN2 (ENSNSUG00000016928) ENSNSUG00000016929 CILP2 (ENSNSUG00000016932) ENSNSUG00000016933 ##25 TBXA2R (ENSNSUG00000016934) #24 ENSNSUG00000016935 #23 HMG20B (ENSNSUG00000016937) #22 FZR1 (ENSNSUG00000016942) #19 Eastern brown snake MODERN SPECIES 10 ENSPTXG00000002507 ENSPTXG00000002509 R3HDM4 (ENSPTXG00000002517) ENSPTXG00000002521 ARID3A (ENSPTXG00000002525) RNF126 (ENSPTXG00000002529) FGF22 (ENSPTXG00000002532) POLR2E (ENSPTXG00000002533) ARHGAP45 (ENSPTXG00000002541) CNN2 (ENSPTXG00000002574) ENSPTXG00000002579 CILP2 (ENSPTXG00000002588) ENSPTXG00000002591 ##25 TBXA2R (ENSPTXG00000002594) #24 ENSPTXG00000002595 #23 HMG20B (ENSPTXG00000000053) #22 FZR1 (ENSPTXG00000000074) #19 TEKTIP1 (ENSPTXG00000000109) #20 MFSD12 (ENSPTXG00000000131) #21 ENSPTXG00000000152 ENSPTXG00000000414 NFIC (ENSPTXG00000001935) #15 ABHD17A (ENSPTXG00000001937) KLF16 (ENSPTXG00000001939) ENSPTXG00000001941 REXO1 (ENSPTXG00000001945) ENSPTXG00000001948 ENSPTXG00000001950 ONECUT3 (ENSPTXG00000001952) ENSPTXG00000001953 TCF3 (ENSPTXG00000001955) Blue-lipped sea krait MODERN SPECIES 2325 LPCAT3 (ENSLLTG00000013576) EMG1 (ENSLLTG00000013570) ENSLLTG00000013564 GIPC3 (ENSLLTG00000013557) #23 HMG20B (ENSLLTG00000013550) #22 FZR1 (ENSLLTG00000013544) #19 Indian cobra MODERN SPECIES PLPPR3 (ENSNNAG00000011915) CFD (ENSNNAG00000011939) MED16 (ENSNNAG00000011978) ENSNNAG00000012118 ARID3A (ENSNNAG00000012160) RNF126 (ENSNNAG00000012196) FGF22 (ENSNNAG00000012227) POLR2E (ENSNNAG00000012276) ARHGAP45 (ENSNNAG00000012299) CNN2 (ENSNNAG00000012412) YJEFN3 (ENSNNAG00000012438) CILP2 (ENSNNAG00000012542) ENSNNAG00000012600 ##25 TBXA2R (ENSNNAG00000012629) #24 ENSNNAG00000012654 #23 HMG20B (ENSNNAG00000012669) #22 FZR1 (ENSNNAG00000012729) #19 TEKTIP1 (ENSNNAG00000012744) #20 MFSD12 (ENSNNAG00000012793) #21 ENSNNAG00000012815 ENSNNAG00000012846 ENSNNAG00000013151 NFIC (ENSNNAG00000000272) #15 ABHD17A (ENSNNAG00000000284) ENSNNAG00000000301 REXO1 (ENSNNAG00000000312) ATP8B3 (ENSNNAG00000000342) ONECUT3 (ENSNNAG00000000374) TCF3 (ENSNNAG00000000394) ENSNNAG00000000420 ENSNNAG00000000432 tuatara MODERN SPECIES 632 KLF16 (ENSSPUG00000015949) REXO1 (ENSSPUG00000015936) ENSSPUG00000015927 ATP8B3 (ENSSPUG00000015886) ONECUT3 (ENSSPUG00000015874) TCF3 (ENSSPUG00000015862) UQCR11 (ENSSPUG00000015857) ENSSPUG00000015853 MEX3D (ENSSPUG00000015849) UNC13A (ENSSPUG00000015816) NFIC (ENSSPUG00000015778) #15 DOHH (ENSSPUG00000015767) #18 FZR1 (ENSSPUG00000015746) #19 TEKTIP1 (ENSSPUG00000015730) #20 MFSD12 (ENSSPUG00000015627) #21 HMG20B (ENSSPUG00000015595) #22 ENSSPUG00000015524 ##25 PIP5K1C (ENSSPUG00000015473) #26 TJP3 (ENSSPUG00000015413) #27 APBA3 (ENSSPUG00000015379) #28 MRPL54 (ENSSPUG00000015361) #29 ENSSPUG00000015319 ENSSPUG00000015302 Archelosauria ANCESTRAL SPECIES 20 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000155528 ENSGT00940000164644 Archosauria ANCESTRAL SPECIES 16 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000155528 ENSGT00940000164644 Aves ANCESTRAL SPECIES 20 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B Neognathae ANCESTRAL SPECIES 21 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B Neognathae_b ANCESTRAL SPECIES 22 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01010000224514 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B Passeriformes ANCESTRAL SPECIES 27 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01010000224514 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 Passeriformes_d ANCESTRAL SPECIES 28 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01010000224514 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 Flycatcher MODERN SPECIES 20 REXO1 (ENSFALG00000013737) ATP8B3 (ENSFALG00000013734) ONECUT3 (ENSFALG00000011399) TCF3 (ENSFALG00000011409) UQCR11 (ENSFALG00000011419) ENSFALG00000011424 MEX3D (ENSFALG00000026265) ENSFALG00000011460 NFIC (ENSFALG00000011533) #15 ENSFALG00000022936 DOHH (ENSFALG00000011564) #18 ENSFALG00000011571 FZR1 (ENSFALG00000024069) #19 ENSFALG00000011585 MFSD12 (ENSFALG00000011597) #21 HMG20B (ENSFALG00000025880) #22 ENSFALG00000023251 #23 TBXA2R (ENSFALG00000011627) #24 ENSFALG00000011629 ##25 PIP5K1C (ENSFALG00000011633) #26 TJP3 (ENSFALG00000011640) #27 ENSFALG00000025032 #29 ENSFALG00000023616 ENSFALG00000011704 ENSFALG00000011714 MATK (ENSFALG00000011720) #31 ENSFALG00000011725 ENSFALG00000011740 ENSFALG00000023088 ENSFALG00000023564 ENSFALG00000011771 Passeriformes_g ANCESTRAL SPECIES 29 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT01100000264330 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01010000224514 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 Passeroidea ANCESTRAL SPECIES 29 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT01100000264330 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000161905 ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01010000224514 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 Zebra finch MODERN SPECIES 21 ATP8B3 (ENSTGUG00000000215) ONECUT3 (ENSTGUG00000000213) ENSTGUG00000024129 TCF3 (ENSTGUG00000000208) ENSTGUG00000028830 ENSTGUG00000027738 ENSTGUG00000000202 MEX3D (ENSTGUG00000000201) ENSTGUG00000000189 NFIC (ENSTGUG00000000182) #15 FZR1 (ENSTGUG00000000181) #19 DOHH (ENSTGUG00000022298) #18 ENSTGUG00000021145 ENSTGUG00000023440 MFSD12 (ENSTGUG00000000177) #21 HMG20B (ENSTGUG00000000169) #22 ENSTGUG00000000168 #23 TBXA2R (ENSTGUG00000000167) #24 ENSTGUG00000000163 ##25 PIP5K1C (ENSTGUG00000000155) #26 TJP3 (ENSTGUG00000000147) #27 APBA3 (ENSTGUG00000000142) #28 MRPL54 (ENSTGUG00000028379) #29 ENSTGUG00000000138 RAX2 (ENSTGUG00000000137) ENSTGUG00000023054 MATK (ENSTGUG00000000123) #31 ELAVL1 (ENSTGUG00000000118) ENSTGUG00000000105 ENSTGUG00000019237 POLE4 (ENSTGUG00000000102) Common canary MODERN SPECIES 44 ENSSCAG00000002235 ABHD17A (ENSSCAG00000002228) REXO1 (ENSSCAG00000002218) TCF3 (ENSSCAG00000002157) ENSSCAG00000002149 ENSSCAG00000002147 MEX3D (ENSSCAG00000002143) UNC13A (ENSSCAG00000001566) NFIC (ENSSCAG00000001320) #15 ENSSCAG00000001314 DOHH (ENSSCAG00000001308) #18 ENSSCAG00000001302 FZR1 (ENSSCAG00000001289) #19 ENSSCAG00000001281 MFSD12 (ENSSCAG00000001269) #21 HMG20B (ENSSCAG00000001244) #22 ENSSCAG00000001232 #23 TBXA2R (ENSSCAG00000001225) #24 ENSSCAG00000001185 ##25 PIP5K1C (ENSSCAG00000001122) #26 TJP3 (ENSSCAG00000001080) #27 APBA3 (ENSSCAG00000001052) #28 MRPL54 (ENSSCAG00000001032) #29 ENSSCAG00000001022 ENSSCAG00000001011 ENSSCAG00000000989 MATK (ENSSCAG00000000977) #31 ELAVL1 (ENSSCAG00000000962) ENSSCAG00000000890 ENSSCAG00000000860 ENSSCAG00000000847 Medium ground finch MODERN SPECIES 144 SCAMP4 (ENSGFOG00000011599) ENSGFOG00000011608 ENSGFOG00000011616 ABHD17A (ENSGFOG00000011621) REXO1 (ENSGFOG00000011627) ATP8B3 (ENSGFOG00000011643) TCF3 (ENSGFOG00000011869) ENSGFOG00000011894 ENSGFOG00000011901 ENSGFOG00000011913 NFIC (ENSGFOG00000011961) #15 DOHH (ENSGFOG00000011973) #18 ENSGFOG00000011976 FZR1 (ENSGFOG00000011979) #19 MFSD12 (ENSGFOG00000011989) #21 HMG20B (ENSGFOG00000011992) #22 GIPC3 (ENSGFOG00000011999) #23 TBXA2R (ENSGFOG00000012003) #24 ENSGFOG00000012009 ##25 PIP5K1C (ENSGFOG00000012030) #26 TJP3 (ENSGFOG00000012394) #27 APBA3 (ENSGFOG00000012404) #28 MRPL54 (ENSGFOG00000012408) #29 ENSGFOG00000012410 ENSGFOG00000012415 MATK (ENSGFOG00000012418) #31 ELAVL1 (ENSGFOG00000012421) ENSGFOG00000012426 ENSGFOG00000012450 ENSGFOG00000012457 ENSGFOG00000012463 Great tit MODERN SPECIES 21 REXO1 (ENSPMJG00000010174) ENSPMJG00000010168 ENSPMJG00000010161 ONECUT3 (ENSPMJG00000010159) TCF3 (ENSPMJG00000010156) ENSPMJG00000010155 ENSPMJG00000010147 MEX3D (ENSPMJG00000010140) ENSPMJG00000004858 NFIC (ENSPMJG00000004825) #15 DOHH (ENSPMJG00000004816) #18 ENSPMJG00000004812 FZR1 (ENSPMJG00000004796) #19 ENSPMJG00000004792 MFSD12 (ENSPMJG00000004783) #21 HMG20B (ENSPMJG00000004780) #22 GIPC3 (ENSPMJG00000004693) #23 TBXA2R (ENSPMJG00000004691) #24 ENSPMJG00000004684 ##25 PIP5K1C (ENSPMJG00000004656) #26 TJP3 (ENSPMJG00000004633) #27 APBA3 (ENSPMJG00000004626) #28 MRPL54 (ENSPMJG00000004616) #29 ENSPMJG00000004606 ENSPMJG00000004597 ENSPMJG00000004591 MATK (ENSPMJG00000004576) #31 ELAVL1 (ENSPMJG00000004561) ENSPMJG00000004552 ENSPMJG00000004531 POLE4 (ENSPMJG00000004528) Neognathae_c ANCESTRAL SPECIES 24 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000155347.b ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT01010000224514 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00960000189460 ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B Golden eagle MODERN SPECIES 3 ONECUT3 (ENSACCG00020016434) TCF3 (ENSACCG00020011467) UQCR11 (ENSACCG00020011517) ENSACCG00020011539 MEX3D (ENSACCG00020011577) ENSACCG00020011648 ENSACCG00020011705 ENSACCG00020011729 ENSACCG00020011918 NFIC (ENSACCG00020012082) #15 DOHH (ENSACCG00020012109) #18 ENSACCG00020012129 FZR1 (ENSACCG00020012157) #19 TEKTIP1 (ENSACCG00020012261) #20 MFSD12 (ENSACCG00020012306) #21 HMG20B (ENSACCG00020012330) #22 ENSACCG00020012353 #23 TBXA2R (ENSACCG00020012364) #24 PIP5K1C (ENSACCG00020012477) #26 TJP3 (ENSACCG00020012618) #27 APBA3 (ENSACCG00020012658) #28 MRPL54 (ENSACCG00020012687) #29 ENSACCG00020012709 ENSACCG00020012751 ENSACCG00020012764 MATK (ENSACCG00020013164) #31 ELAVL1 (ENSACCG00020013295) ENSACCG00020013372 ENSACCG00020013437 POLE4 (ENSACCG00020013458) ENSACCG00020013477 Kakapo MODERN SPECIES 13 ENSSHBG00005013410 NFIC (ENSSHBG00005013381) #15 ENSSHBG00005013364 DOHH (ENSSHBG00005013357) #18 ENSSHBG00005013349 FZR1 (ENSSHBG00005013339) #19 ENSSHBG00005013326 MFSD12 (ENSSHBG00005013315) #21 HMG20B (ENSSHBG00005013303) #22 GIPC3 (ENSSHBG00005013294) #23 TBXA2R (ENSSHBG00005013287) #24 ENSSHBG00005013279 ENSSHBG00005013272 ##25 PIP5K1C (ENSSHBG00005013262) #26 TJP3 (ENSSHBG00005013238) #27 APBA3 (ENSSHBG00005013079) #28 ENSSHBG00005013048 #29 ENSSHBG00005013012 ENSSHBG00005012995 #29 ENSSHBG00005012973 ENSSHBG00005012944 ENSSHBG00005012929 MATK (ENSSHBG00005012904) #31 ELAVL1 (ENSSHBG00005012884) Galloanserae ANCESTRAL SPECIES 20 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000155347.b ENSGT01030000234573.A.b.b.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B Anatidae ANCESTRAL SPECIES 57 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00960000189460 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B ENSGT00940000160888 Pink-footed goose MODERN SPECIES 273 DOHH (ENSABRG00000004216) #18 ENSABRG00000004220 FZR1 (ENSABRG00000004261) #19 TEKTIP1 (ENSABRG00000004277) #20 ENSABRG00000004289 MFSD12 (ENSABRG00000004305) #21 HMG20B (ENSABRG00000004332) #22 GIPC3 (ENSABRG00000004371) #23 TBXA2R (ENSABRG00000004389) #24 ENSABRG00000004393 ##25 PIP5K1C (ENSABRG00000004479) #26 TJP3 (ENSABRG00000005619) #27 APBA3 (ENSABRG00000005634) #28 MRPL54 (ENSABRG00000005647) #29 ENSABRG00000005669 ENSABRG00000005702 MATK (ENSABRG00000005710) #31 ENSABRG00000005747 ELAVL1 (ENSABRG00000005780) ENSABRG00000005795 ENSABRG00000005811 POLE4 (ENSABRG00000005824) Duck MODERN SPECIES 1643 HMG20B (ENSAPLG00000005528) #22 Phasianidae ANCESTRAL SPECIES 19 ENSGT01030000234551.j.a ENSGT00940000161033 #11 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##10 ENSGT01030000234519.e.a.a.b.a.a.b.b ##10 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT00940000155885 ENSGT00940000155347.b ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B Phasianidae_b ANCESTRAL SPECIES 20 ENSGT01030000234551.j.a ENSGT00940000161033 #11 ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##10 ENSGT01030000234519.e.a.a.b.a.a.b.b ##10 ENSGT01030000234519.e.a.a.b.a.a.a #8 ENSGT00940000155885 ENSGT00940000155347.b ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00950000182938.b.b.b.b.b.a ENSGT00940000160775 #31 ENSGT00940000155528 ENSGT00940000164644 ENSGT00530000063460.B Chicken MODERN SPECIES 20 GNA11 (ENSGALG00010027099) #11 ENSGALG00010027173 ##10 ENSGALG00010027170 ##10 ENSGALG00010027165 #8 PLPP2 (ENSGALG00010027154) ENSGALG00010027144 ENSGALG00010027120 ENSGALG00010028192 NFIC (ENSGALG00010028165) #15 DOHH (ENSGALG00010028156) #18 ENSGALG00010028154 FZR1 (ENSGALG00010028139) #19 TEKTIP1 (ENSGALG00010028135) #20 ENSGALG00010028133 MFSD12 (ENSGALG00010028127) #21 HMG20B (ENSGALG00010028125) #22 GIPC3 (ENSGALG00010028614) #23 TBXA2R (ENSGALG00010028120) #24 ENSGALG00010028117 ENSGALG00010028115 ##25 PIP5K1C (ENSGALG00010028113) #26 TJP3 (ENSGALG00010028109) #27 APBA3 (ENSGALG00010028103) #28 MRPL54 (ENSGALG00010028101) #29 PCASP2 (ENSGALG00010028099) RAX2 (ENSGALG00010028092) ENSGALG00010028090 ENSGALG00010028089 MATK (ENSGALG00010028086) #31 ELAVL1 (ENSGALG00010028083) ENSGALG00010028077 Turkey MODERN SPECIES 23 ENSMGAG00000017983 ENSMGAG00000020928 GNA11 (ENSMGAG00000011971) #11 ENSMGAG00000018357 ##10 ENSMGAG00000020401 ##10 ENSMGAG00000010080 ENSMGAG00000007708 ENSMGAG00000009189 ENSMGAG00000022151 ##15 DOHH (ENSMGAG00000001468) #18 ENSMGAG00000001467 FZR1 (ENSMGAG00000001395) #19 TEKTIP1 (ENSMGAG00000018114) #20 ENSMGAG00000001386 MFSD12 (ENSMGAG00000001371) #21 HMG20B (ENSMGAG00000001362) #22 GIPC3 (ENSMGAG00000018477) #23 TBXA2R (ENSMGAG00000015732) #24 ENSMGAG00000001353 ##25 PIP5K1C (ENSMGAG00000001308) #26 TJP3 (ENSMGAG00000000963) #27 APBA3 (ENSMGAG00000000958) #28 ENSMGAG00000000932 ENSMGAG00000000927 ENSMGAG00000017507 ENSMGAG00000021609 MATK (ENSMGAG00000000903) #31 ENSMGAG00000001015 ENSMGAG00000001030 ENSMGAG00000007590 ENSMGAG00000017295 Japanese quail MODERN SPECIES 20 ENSCJPG00005009736 GNA11 (ENSCJPG00005009735) #11 ENSCJPG00005009732 ##10 ENSCJPG00005009720 ##10 ENSCJPG00005009719 ENSCJPG00005009718 #8 PLPP2 (ENSCJPG00005009717) ENSCJPG00005009716 ENSCJPG00005006208 NFIC (ENSCJPG00005006181) #15 ENSCJPG00005006177 ENSCJPG00005006176 FZR1 (ENSCJPG00005006175) #19 ENSCJPG00005006174 MFSD12 (ENSCJPG00005006173) #21 HMG20B (ENSCJPG00005006172) #22 GIPC3 (ENSCJPG00005006171) #23 TBXA2R (ENSCJPG00005006170) #24 ENSCJPG00005006165 ##25 TJP3 (ENSCJPG00005006163) #27 ENSCJPG00005006161 ENSCJPG00005006160 #29 ENSCJPG00005006159 ENSCJPG00005006158 ENSCJPG00005006157 MATK (ENSCJPG00005006156) #31 ELAVL1 (ENSCJPG00005006154) ENSCJPG00005006153 ENSCJPG00005006148 POLE4 (ENSCJPG00005006146) ENSCJPG00005006142 African ostrich MODERN SPECIES 436 DOHH (ENSSCUG00000010102) #18 FZR1 (ENSSCUG00000010103) #19 TEKTIP1 (ENSSCUG00000010104) #20 ENSSCUG00000010105 MFSD12 (ENSSCUG00000010106) #21 HMG20B (ENSSCUG00000010107) #22 ENSSCUG00000010108 #23 TBXA2R (ENSSCUG00000010109) #24 ENSSCUG00000010110 ##25 PIP5K1C (ENSSCUG00000010111) #26 TJP3 (ENSSCUG00000010113) #27 APBA3 (ENSSCUG00000010114) #28 ENSSCUG00000010115 ENSSCUG00000010116 ENSSCUG00000010117 MATK (ENSSCUG00000010118) #31 ELAVL1 (ENSSCUG00000010120) ENSSCUG00000010121 ENSSCUG00000010122 ENSSCUG00000010123 ENSSCUG00000010124 Australian saltwater crocodile MODERN SPECIES 62 GNA11 (ENSCPRG00005011942) #11 ENSCPRG00005011947 ##10 ENSCPRG00005011960 ##10 ENSCPRG00005012053 #8 ENSCPRG00005012070 PLPP2 (ENSCPRG00005012077) ENSCPRG00005012081 ENSCPRG00005012118 NFIC (ENSCPRG00005012131) #15 DOHH (ENSCPRG00005012140) #18 ENSCPRG00005012146 FZR1 (ENSCPRG00005012153) #19 TEKTIP1 (ENSCPRG00005012161) #20 ENSCPRG00005012164 MFSD12 (ENSCPRG00005012178) #21 HMG20B (ENSCPRG00005012188) #22 ENSCPRG00005012192 #23 TBXA2R (ENSCPRG00005012195) #24 ENSCPRG00005012199 ##25 PIP5K1C (ENSCPRG00005012281) #26 TJP3 (ENSCPRG00005012534) #27 APBA3 (ENSCPRG00005012719) #28 MRPL54 (ENSCPRG00005012722) #29 ENSCPRG00005012729 ENSCPRG00005012742 ENSCPRG00005012745 MATK (ENSCPRG00005012763) #31 ZFR2 (ENSCPRG00005012851) #32 ELAVL1 (ENSCPRG00005012995) ENSCPRG00005013005 POLE4 (ENSCPRG00005013023) Cryptodira ANCESTRAL SPECIES 19 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000155528 ENSGT00940000164644 ENSGT00940000160888 Chinese turtle MODERN SPECIES 445 ENSPSIG00000014388 NFIC (ENSPSIG00000013911) #15 ENSPSIG00000001828 ENSPSIG00000013887 DOHH (ENSPSIG00000013789) #18 ENSPSIG00000001825 FZR1 (ENSPSIG00000011820) #19 MFSD12 (ENSPSIG00000011432) #21 HMG20B (ENSPSIG00000010923) #22 GIPC3 (ENSPSIG00000010821) #23 Testudinoidea ANCESTRAL SPECIES 39 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000155528 ENSGT00940000164644 ENSGT00940000160888 Testudinidae ANCESTRAL SPECIES 49 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299.u.b ENSGT00390000018299.u.a ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000155528 ENSGT00940000164644 ENSGT00940000160888 ENSGT00390000005847 Goode s thornscrub tortoise MODERN SPECIES 14 ENSGEVG00005012366 ONECUT3 (ENSGEVG00005012425) TCF3 (ENSGEVG00005012471) ENSGEVG00005012591 ENSGEVG00005012619 MEX3D (ENSGEVG00005012665) ENSGEVG00005012690 ENSGEVG00005013038 NFIC (ENSGEVG00005014577) #15 ENSGEVG00005014641 DOHH (ENSGEVG00005014695) #18 ENSGEVG00005014711 FZR1 (ENSGEVG00005014726) #19 TEKTIP1 (ENSGEVG00005014767) #20 MFSD12 (ENSGEVG00005014847) #21 HMG20B (ENSGEVG00005014871) #22 GIPC3 (ENSGEVG00005014894) #23 TBXA2R (ENSGEVG00005014923) #24 ENSGEVG00005014938 ##25 PIP5K1C (ENSGEVG00005014989) #26 TJP3 (ENSGEVG00005015129) #27 APBA3 (ENSGEVG00005015529) #28 MRPL54 (ENSGEVG00005015567) #29 ENSGEVG00005015581 ENSGEVG00005015609 ENSGEVG00005015652 #31 ENSGEVG00005015729 #31 ZFR2 (ENSGEVG00005015775) #32 ELAVL1 (ENSGEVG00005015828) ENSGEVG00005015882 POLE4 (ENSGEVG00005016190) Abingdon island giant tortoise MODERN SPECIES 925 ENSCABG00000022154 DOHH (ENSCABG00000022155) #18 FZR1 (ENSCABG00000022157) #19 TEKTIP1 (ENSCABG00000022161) #20 MFSD12 (ENSCABG00000022162) #21 HMG20B (ENSCABG00000022164) #22 ENSCABG00000022165 #23 Emydidae ANCESTRAL SPECIES 14 ENSGT00940000160463 ENSGT00950000183103.d.b ENSGT00940000157036 ENSGT00390000018299 ENSGT00950000183005.b.c ENSGT00940000162613 ENSGT00940000155402.a.a ENSGT00940000154929.B ENSGT00950000182916.a.a #15 ENSGT00500000044957 #18 ENSGT00940000163250.C ENSGT00950000183104.B.a.a #19 ENSGT00390000004282 #20 ENSGT00940000165115 ENSGT00390000005318.a #21 ENSGT00940000161213 #22 ENSGT00390000003420.b #23 ENSGT01030000234559.a.a.a #24 ENSGT00520000060565 ENSGT00950000183102.B ##25 ENSGT00940000159258 #26 ENSGT00940000160036 #27 ENSGT00940000160384 #28 ENSGT00390000001201 #29 ENSGT00390000018044.b.b ENSGT00940000163917.b ENSGT00940000160775 #31 ENSGT00940000162148 #32 ENSGT00940000155528 ENSGT00940000164644 ENSGT01060000249141 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 26 WDR1 (ENSTMTG00000007438) SLC2A9 (ENSTMTG00000007455) DRD5 (ENSTMTG00000007482) TMEM128 (ENSTMTG00000007505) LYAR (ENSTMTG00000007524) ZBTB49 (ENSTMTG00000007562) NSG1 (ENSTMTG00000007591) STX18 (ENSTMTG00000007630) MSX1 (ENSTMTG00000007738) CYTL1 (ENSTMTG00000007759) STK32B (ENSTMTG00000007831) EVC2 (ENSTMTG00000007848) EVC (ENSTMTG00000007885) CRMP1 (ENSTMTG00000007924) JAKMIP1 (ENSTMTG00000008119) ENSTMTG00000008189 #22 WFS1 (ENSTMTG00000008214) PPP2R2C (ENSTMTG00000008237) MAN2B2 (ENSTMTG00000008295) ENSTMTG00000008326 S100P (ENSTMTG00000008342) KIAA0232 (ENSTMTG00000000071) TBC1D14 (ENSTMTG00000000113) ENSTMTG00000000147 TADA2B (ENSTMTG00000000170) GRPEL1 (ENSTMTG00000000187) SORCS2 (ENSTMTG00000000224) AFAP1 (ENSTMTG00000000264) ABLIM2 (ENSTMTG00000000378) ENSTMTG00000000583 HTRA3 (ENSTMTG00000000640) Three-toed box turtle MODERN SPECIES 92 ONECUT3 (ENSTMTG00000022716) TCF3 (ENSTMTG00000022717) ENSTMTG00000022724 ENSTMTG00000022725 MEX3D (ENSTMTG00000022729) ENSTMTG00000022734 ENSTMTG00000022764 ENSTMTG00000022786 NFIC (ENSTMTG00000022787) #15 DOHH (ENSTMTG00000022789) #18 ENSTMTG00000022790 FZR1 (ENSTMTG00000022792) #19 TEKTIP1 (ENSTMTG00000022799) #20 ENSTMTG00000008062 MFSD12 (ENSTMTG00000008079) #21 HMG20B (ENSTMTG00000008113) #22 ENSTMTG00000008123 #23 TBXA2R (ENSTMTG00000008132) #24 ENSTMTG00000008142 ##25 PIP5K1C (ENSTMTG00000008165) #26 TJP3 (ENSTMTG00000008241) #27 MRPL54 (ENSTMTG00000008274) #29 ENSTMTG00000008284 ENSTMTG00000008306 MATK (ENSTMTG00000008318) #31 ZFR2 (ENSTMTG00000008348) #32 ELAVL1 (ENSTMTG00000008373) ENSTMTG00000008394 painted turtle DUPLICATION painted turtle MODERN SPECIES 735 OTOP1 (ENSCPBG00000005678) TMEM128 (ENSCPBG00000005684) LYAR (ENSCPBG00000005694) ZBTB49 (ENSCPBG00000005715) NSG1 (ENSCPBG00000005741) STX18 (ENSCPBG00000005749) MSX1 (ENSCPBG00000005760) CYTL1 (ENSCPBG00000005764) STK32B (ENSCPBG00000005772) ENSCPBG00000005777 EVC2 (ENSCPBG00000005781) EVC (ENSCPBG00000005805) CRMP1 (ENSCPBG00000005843) ENSCPBG00000005861 JAKMIP1 (ENSCPBG00000005873) ENSCPBG00000005911 #22 WFS1 (ENSCPBG00000005922) PPP2R2C (ENSCPBG00000005936) MAN2B2 (ENSCPBG00000005953) S100P (ENSCPBG00000005979) KIAA0232 (ENSCPBG00000005999) TBC1D14 (ENSCPBG00000006010) ENSCPBG00000006022 TADA2B (ENSCPBG00000006029) GRPEL1 (ENSCPBG00000006033) painted turtle MODERN SPECIES 763 UQCR11 (ENSCPBG00000018448) ENSCPBG00000018443 MEX3D (ENSCPBG00000018438) ENSCPBG00000018431 ENSCPBG00000018422 ENSCPBG00000018419 ENSCPBG00000017241 NFIC (ENSCPBG00000017128) #15 DOHH (ENSCPBG00000017126) #18 ENSCPBG00000017125 FZR1 (ENSCPBG00000017124) #19 ENSCPBG00000017123 ENSCPBG00000017122 ENSCPBG00000017121 ENSCPBG00000017119 HMG20B (ENSCPBG00000017118) #22 ENSCPBG00000017117 #23 TBXA2R (ENSCPBG00000017116) #24 ENSCPBG00000017115 ENSCPBG00000017114 ##25 PIP5K1C (ENSCPBG00000017112) #26 TJP3 (ENSCPBG00000017110) #27 APBA3 (ENSCPBG00000017105) #28 MRPL54 (ENSCPBG00000017103) #29 ENSCPBG00000017102 ENSCPBG00000017101 MATK (ENSCPBG00000017100) #31 ZFR2 (ENSCPBG00000017098) #32 ELAVL1 (ENSCPBG00000017097) ENSCPBG00000017078 ENSCPBG00000017075