Euteleostomi	ANCESTRAL SPECIES	269			ENSGT01070000253895	ENSGT00390000017606.a.a #14	ENSGT00950000182935.B.b.c #13	ENSGT00510000048276 #12	ENSGT00390000008221 #11	ENSGT00940000179237	ENSGT00950000183122.C	ENSGT00940000157282	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b
Sarcopterygii	ANCESTRAL SPECIES	601													ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b
Tetrapoda	ANCESTRAL SPECIES	76	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT01100000264550	ENSGT00390000017606.a.a #14	ENSGT01070000253895	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748
Mammalia	ANCESTRAL SPECIES	8	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34
Theria	ANCESTRAL SPECIES	2	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00940000154705.B	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00990000212395 #18	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00990000212395 #18	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00990000212395 #18	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b.n.a.a #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00990000212395 #18	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b.n.a.a #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Narwhal	MODERN SPECIES	313	CACNA1I (ENSMMNG00015015894) #7	RPS19BP1 (ENSMMNG00015020420) #8	ATF4 (ENSMMNG00015020400) #9	MIEF1 (ENSMMNG00015020378) #10	MGAT3 (ENSMMNG00015020365) #11	TAB1 (ENSMMNG00015020340) #12	SYNGR1 (ENSMMNG00015020318) #13	ENSMMNG00015020253 #14	PDGFB (ENSMMNG00015020223) #15	CBX7 (ENSMMNG00015020192) #16	ENSMMNG00015020146 #17	ENSMMNG00015020113 #18	ENSMMNG00015020087 #19	CBX6 (ENSMMNG00015020063) #20	NPTXR (ENSMMNG00015020037) #21	DNAL4 (ENSMMNG00015020017) #22	SUN2 (ENSMMNG00015019962) #23	GTPBP1 (ENSMMNG00015019885) #24	ENSMMNG00015019845 #25	TOMM22 (ENSMMNG00015019815) #26	CBY1 (ENSMMNG00015019796) #27	FAM227A (ENSMMNG00015019747) #28	DMC1 (ENSMMNG00015019639) #29	DDX17 (ENSMMNG00015019596) #30	KDELR3 (ENSMMNG00015019578) #31	KCNJ4 (ENSMMNG00015019556) #32	CSNK1E (ENSMMNG00015019527) #33	TMEM184B (ENSMMNG00015019489) #34	MAFF (ENSMMNG00015019461) #35	PLA2G6 (ENSMMNG00015019408) #36	BAIAP2L2 (ENSMMNG00015019337) #37
Vaquita	MODERN SPECIES	1	CACNA1I (ENSPSNG00000008922) #7	RPS19BP1 (ENSPSNG00000009181) #8	ATF4 (ENSPSNG00000009230) #9	MIEF1 (ENSPSNG00000009266) #10	MGAT3 (ENSPSNG00000009308) #11	TAB1 (ENSPSNG00000009365) #12	SYNGR1 (ENSPSNG00000009432) #13	ENSPSNG00000009490 #14	PDGFB (ENSPSNG00000009582) #15	CBX7 (ENSPSNG00000009664) #16	ENSPSNG00000009704 #17	ENSPSNG00000009731 #18	ENSPSNG00000009770 #19	CBX6 (ENSPSNG00000009872) #20	NPTXR (ENSPSNG00000009945) #21	DNAL4 (ENSPSNG00000010021) #22	SUN2 (ENSPSNG00000010099) #23	GTPBP1 (ENSPSNG00000010180) #24	ENSPSNG00000010230 #25	TOMM22 (ENSPSNG00000010264) #26	CBY1 (ENSPSNG00000010314) #27	FAM227A (ENSPSNG00000010389) #28	DMC1 (ENSPSNG00000010664) #29	DDX17 (ENSPSNG00000011022) #30	KDELR3 (ENSPSNG00000011088) #31	KCNJ4 (ENSPSNG00000004159) #32	CSNK1E (ENSPSNG00000004204) #33	TMEM184B (ENSPSNG00000004271) #34	MAFF (ENSPSNG00000004304) #35	PLA2G6 (ENSPSNG00000004332) #36	BAIAP2L2 (ENSPSNG00000004407) #37
Dolphin	MODERN SPECIES	3076																DNAL4 (ENSTTRG00000005631) #22	SUN2 (ENSTTRG00000005630) #23	GTPBP1 (ENSTTRG00000005629) #24	JOSD1 (ENSTTRG00000005628) #25	TOMM22 (ENSTTRG00000005627) #26	CBY1 (ENSTTRG00000005626) #27	FAM227A (ENSTTRG00000005625) #28	DMC1 (ENSTTRG00000005624) #29	DDX17 (ENSTTRG00000005623) #30	KDELR3 (ENSTTRG00000005622) #31	CSNK1E (ENSTTRG00000005620) #33	TMEM184B (ENSTTRG00000005619) #34	MAFF (ENSTTRG00000005618) #35	PLA2G6 (ENSTTRG00000005617) #36	BAIAP2L2 (ENSTTRG00000005616) #37	SLC16A8 (ENSTTRG00000005615)
Sperm whale	MODERN SPECIES	17	ENSPCTG00005007305	LGALS1 (ENSPCTG00005007326)	NOL12 (ENSPCTG00005007352)	ENSPCTG00005007373	ENSPCTG00005007394	ENSPCTG00005007427	ENSPCTG00005007579 #36	KCNJ4 (ENSPCTG00005007882) #32	KDELR3 (ENSPCTG00005007902) #31	DDX17 (ENSPCTG00005007944) #30	DMC1 (ENSPCTG00005007974) #29	ENSPCTG00005008062	FAM227A (ENSPCTG00005008086) #28	CBY1 (ENSPCTG00005008189) #27	SUN2 (ENSPCTG00005008220) #23	DNAL4 (ENSPCTG00005008327) #22	ENSPCTG00005008353 #17	ENSPCTG00005008379 #18	ENSPCTG00005008449 #19	SYNGR1 (ENSPCTG00005009002) #13	TAB1 (ENSPCTG00005009063) #12	MGAT3 (ENSPCTG00005009122) #11	ENTHD1 (ENSPCTG00005009147)	CACNA1I (ENSPCTG00005009256) #7	TNRC6B (ENSPCTG00005009548)	ADSL (ENSPCTG00005010119)	SGSM3 (ENSPCTG00005010825)	MRTFA (ENSPCTG00005010942)	MCHR1 (ENSPCTG00005011192)	SLC25A17 (ENSPCTG00005011301)	ENSPCTG00005011468
Blue whale	MODERN SPECIES	1	CACNA1I (ENSBMSG00010010289) #7	RPS19BP1 (ENSBMSG00010010238) #8	ATF4 (ENSBMSG00010010233) #9	MIEF1 (ENSBMSG00010010221) #10	MGAT3 (ENSBMSG00010010217) #11	TAB1 (ENSBMSG00010010202) #12	SYNGR1 (ENSBMSG00010010187) #13	RPL3 (ENSBMSG00010010164) #14	PDGFB (ENSBMSG00010010151) #15	ENSBMSG00010010140 #17	ENSBMSG00010010126	ENSBMSG00010010119	ENSBMSG00010010091 #19	CBX6 (ENSBMSG00010010075) #20	NPTXR (ENSBMSG00010010056) #21	DNAL4 (ENSBMSG00010010042) #22	SUN2 (ENSBMSG00010009997) #23	GTPBP1 (ENSBMSG00010009969) #24	JOSD1 (ENSBMSG00010009958) #25	TOMM22 (ENSBMSG00010009939) #26	CBY1 (ENSBMSG00010009929) #27	FAM227A (ENSBMSG00010009890) #28	DMC1 (ENSBMSG00010009822) #29	DDX17 (ENSBMSG00010009785) #30	KDELR3 (ENSBMSG00010009761) #31	KCNJ4 (ENSBMSG00010009750) #32	CSNK1E (ENSBMSG00010009741) #33	TMEM184B (ENSBMSG00010009730) #34	MAFF (ENSBMSG00010009718) #35	PLA2G6 (ENSBMSG00010009578) #36	BAIAP2L2 (ENSBMSG00010009527) #37
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a.c #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Siberian musk deer	MODERN SPECIES	1247	ENTHD1 (ENSMMSG00000015164)	CACNA1I (ENSMMSG00000015225) #7	RPS19BP1 (ENSMMSG00000015526) #8	ENSMMSG00000015549 #9	MIEF1 (ENSMMSG00000015569) #10	MGAT3 (ENSMMSG00000015591) #11	TAB1 (ENSMMSG00000015603) #12	SYNGR1 (ENSMMSG00000015640) #13	ENSMMSG00000015685 #14	PDGFB (ENSMMSG00000015748) #15	CBX7 (ENSMMSG00000015769) #16	ENSMMSG00000015802 #17	ENSMMSG00000015829 #19	CBX6 (ENSMMSG00000015947) #20	NPTXR (ENSMMSG00000015982) #21	DNAL4 (ENSMMSG00000016031) #22	SUN2 (ENSMMSG00000016072) #23	GTPBP1 (ENSMMSG00000016125) #24	JOSD1 (ENSMMSG00000016158) #25	TOMM22 (ENSMMSG00000016177) #26	CBY1 (ENSMMSG00000016196) #27	FAM227A (ENSMMSG00000016242) #28	DMC1 (ENSMMSG00000016408) #29	DDX17 (ENSMMSG00000016642) #30	KDELR3 (ENSMMSG00000016681) #31	KCNJ4 (ENSMMSG00000016714) #32	CSNK1E (ENSMMSG00000016744) #33	ENSMMSG00000016861	TMEM184B (ENSMMSG00000016881) #34	MAFF (ENSMMSG00000016934) #35	PLA2G6 (ENSMMSG00000016959) #36
Bovidae	ANCESTRAL SPECIES	3	ENSGT00390000016774 #8	ENSGT00530000063801.a.c #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00390000002407.d.x	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Bovinae	ANCESTRAL SPECIES	10	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a.c #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000167817	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Bos	ANCESTRAL SPECIES	2	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a.c #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000167817	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Bos_b	ANCESTRAL SPECIES	30	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a.c #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000167817	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Cow	MODERN SPECIES	24	CACNA1I (ENSBTAG00000045610) #7	RPS19BP1 (ENSBTAG00000017463) #8	ATF4 (ENSBTAG00000017462) #9	MIEF1 (ENSBTAG00000017439) #10	MGAT3 (ENSBTAG00000012503) #11	TAB1 (ENSBTAG00000019828) #12	SYNGR1 (ENSBTAG00000005765) #13	RPL3 (ENSBTAG00000003228) #14	PDGFB (ENSBTAG00000021697) #15	CBX7 (ENSBTAG00000007228) #16	APOBEC3H (ENSBTAG00000007755) #17	ENSBTAG00000051824	APOBEC3Z1 (ENSBTAG00000037800) #19	CBX6 (ENSBTAG00000046724) #20	NPTXR (ENSBTAG00000000109) #21	DNAL4 (ENSBTAG00000049822) #22	SUN2 (ENSBTAG00000003693) #23	GTPBP1 (ENSBTAG00000010324) #24	TOMM22 (ENSBTAG00000010157) #26	CBY1 (ENSBTAG00000006588) #27	FAM227A (ENSBTAG00000010573) #28	ENSBTAG00000048693	DMC1 (ENSBTAG00000005936) #29	DDX17 (ENSBTAG00000009887) #30	KDELR3 (ENSBTAG00000009886) #31	KCNJ4 (ENSBTAG00000051965) #32	CSNK1E (ENSBTAG00000047582) #33	TMEM184B (ENSBTAG00000009668) #34	MAFF (ENSBTAG00000021435) #35	PLA2G6 (ENSBTAG00000014015) #36	BAIAP2L2 (ENSBTAG00000015290) #37
American bison	MODERN SPECIES	3130	RBM11 (ENSBBBG00000004976)	ENSBBBG00000019304	HSPA13 (ENSBBBG00000005017)	ENSBBBG00000008359	NRIP1 (ENSBBBG00000019374)	TAB1 (ENSBBBG00000005150) #12	SYNGR1 (ENSBBBG00000019431) #13	RPL3 (ENSBBBG00000008662) #14	PDGFB (ENSBBBG00000019475) #15	CBX7 (ENSBBBG00000005251) #16	ENSBBBG00000005258 #17	ENSBBBG00000005262 #17	ENSBBBG00000005265	ENSBBBG00000005287 #19	NPTXR (ENSBBBG00000019555) #21	DNAL4 (ENSBBBG00000019565) #22	SUN2 (ENSBBBG00000019604) #23	GTPBP1 (ENSBBBG00000019626) #24	JOSD1 (ENSBBBG00000019642) #25	TOMM22 (ENSBBBG00000019653) #26	CBY1 (ENSBBBG00000005188) #27	FAM227A (ENSBBBG00000005333) #28	DMC1 (ENSBBBG00000019709) #29	DDX17 (ENSBBBG00000019756) #30	KDELR3 (ENSBBBG00000019779) #31	KCNJ4 (ENSBBBG00000005145) #32	CSNK1E (ENSBBBG00000019815) #33	TMEM184B (ENSBBBG00000005369) #34	MAFF (ENSBBBG00000019848) #35	PLA2G6 (ENSBBBG00000019934) #36	BAIAP2L2 (ENSBBBG00000019976) #37
Caprinae	ANCESTRAL SPECIES		ENSGT00390000016774 #8	ENSGT00530000063801.a.c #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00390000002407.d.x	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Goat	MODERN SPECIES	24	CACNA1I (ENSCHIG00000021978) #7	RPS19BP1 (ENSCHIG00000020651) #8	ATF4 (ENSCHIG00000014886) #9	MIEF1 (ENSCHIG00000017368) #10	MGAT3 (ENSCHIG00000008357) #11	TAB1 (ENSCHIG00000014927) #12	SYNGR1 (ENSCHIG00000018332) #13	ENSCHIG00000025454 #14	PDGFB (ENSCHIG00000025693) #15	CBX7 (ENSCHIG00000023361) #16	ENSCHIG00000026580 #17	ENSCHIG00000014670	ENSCHIG00000012694 #19	CBX6 (ENSCHIG00000025856) #20	NPTXR (ENSCHIG00000026587) #21	DNAL4 (ENSCHIG00000018875) #22	SUN2 (ENSCHIG00000011254) #23	GTPBP1 (ENSCHIG00000015505) #24	JOSD1 (ENSCHIG00000021625) #25	TOMM22 (ENSCHIG00000026278) #26	ENSCHIG00000014892 #27	ENSCHIG00000014677 #27	FAM227A (ENSCHIG00000022945) #28	DMC1 (ENSCHIG00000025073) #29	DDX17 (ENSCHIG00000021332) #30	KDELR3 (ENSCHIG00000014466) #31	KCNJ4 (ENSCHIG00000008292) #32	CSNK1E (ENSCHIG00000022992) #33	TMEM184B (ENSCHIG00000023262) #34	MAFF (ENSCHIG00000011957) #35	PLA2G6 (ENSCHIG00000021402) #36
Rambouillet Sheep	MODERN SPECIES	19	CACNA1I (ENSOARG00020013637) #7	RPS19BP1 (ENSOARG00020013278) #8	ATF4 (ENSOARG00020013226) #9	MIEF1 (ENSOARG00020013174) #10	ENSOARG00020013145	MGAT3 (ENSOARG00020013113) #11	TAB1 (ENSOARG00020012878) #12	SYNGR1 (ENSOARG00020012529) #13	RPL3 (ENSOARG00020012384) #14	PDGFB (ENSOARG00020012236) #15	CBX7 (ENSOARG00020012086) #16	APOBEC3Z3 (ENSOARG00020011837) #17	APOBEC3Z1 (ENSOARG00020011689) #19	CBX6 (ENSOARG00020011626) #20	NPTXR (ENSOARG00020011569) #21	DNAL4 (ENSOARG00020011506) #22	SUN2 (ENSOARG00020011347) #23	GTPBP1 (ENSOARG00020011180) #24	JOSD1 (ENSOARG00020011101) #25	TOMM22 (ENSOARG00020011046) #26	CBY1 (ENSOARG00020010987) #27	FAM227A (ENSOARG00020010830) #28	DMC1 (ENSOARG00020009462) #29	DDX17 (ENSOARG00020009246) #30	KDELR3 (ENSOARG00020009181) #31	KCNJ4 (ENSOARG00020009164) #32	CSNK1E (ENSOARG00020009137) #33	TMEM184B (ENSOARG00020009079) #34	MAFF (ENSOARG00020009041) #35	PLA2G6 (ENSOARG00020008751) #36	BAIAP2L2 (ENSOARG00020008456) #37
Camelidae	ANCESTRAL SPECIES	28	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Arabian camel	MODERN SPECIES	3	ENSCDRG00005014742	ENTHD1 (ENSCDRG00005014688)	CACNA1I (ENSCDRG00005014553) #7	RPS19BP1 (ENSCDRG00005014506) #8	ATF4 (ENSCDRG00005014461) #9	MIEF1 (ENSCDRG00005014418) #10	MGAT3 (ENSCDRG00005014395) #11	TAB1 (ENSCDRG00005014324) #12	SYNGR1 (ENSCDRG00005014126) #13	ENSCDRG00005013983 #14	PDGFB (ENSCDRG00005013910) #15	ENSCDRG00005013590 #17	ENSCDRG00005013524 #19	CBX6 (ENSCDRG00005013470) #20	NPTXR (ENSCDRG00005013164) #21	DNAL4 (ENSCDRG00005013091) #22	SUN2 (ENSCDRG00005012926) #23	GTPBP1 (ENSCDRG00005012834) #24	JOSD1 (ENSCDRG00005012778) #25	ENSCDRG00005012757 #26	CBY1 (ENSCDRG00005012693) #27	FAM227A (ENSCDRG00005012576) #28	DMC1 (ENSCDRG00005012248) #29	DDX17 (ENSCDRG00005012121) #30	KDELR3 (ENSCDRG00005012072) #31	KCNJ4 (ENSCDRG00005012060) #32	CSNK1E (ENSCDRG00005011965) #33	TMEM184B (ENSCDRG00005011844) #34	MAFF (ENSCDRG00005011815) #35	PLA2G6 (ENSCDRG00005011621) #36	BAIAP2L2 (ENSCDRG00005011560) #37
Suina	ANCESTRAL SPECIES	21	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Pig	MODERN SPECIES	13	ENTHD1 (ENSSSCG00000000081)	CACNA1I (ENSSSCG00000000082) #7	RPS19BP1 (ENSSSCG00000060019) #8	ATF4 (ENSSSCG00000059058) #9	ENSSSCG00000039538 #10	MGAT3 (ENSSSCG00000038126) #11	TAB1 (ENSSSCG00000000087) #12	SYNGR1 (ENSSSCG00000020873) #13	RPL3 (ENSSSCG00000040494) #14	PDGFB (ENSSSCG00000033327) #15	CBX7 (ENSSSCG00000060236) #16	ENSSSCG00000000091 #17	ENSSSCG00000054928	CBX6 (ENSSSCG00000040334) #20	NPTXR (ENSSSCG00000000092) #21	DNAL4 (ENSSSCG00000000093) #22	GTPBP1 (ENSSSCG00000000095) #24	SUN2 (ENSSSCG00000000094) #23	JOSD1 (ENSSSCG00000039555) #25	TOMM22 (ENSSSCG00000000097) #26	ENSSSCG00000043051	FAM227A (ENSSSCG00000035577) #28	ENSSSCG00000055522	DMC1 (ENSSSCG00000000103) #29	ENSSSCG00000000104	KDELR3 (ENSSSCG00000000105) #31	KCNJ4 (ENSSSCG00000000106) #32	CSNK1E (ENSSSCG00000000107) #33	TMEM184B (ENSSSCG00000000108) #34	MAFF (ENSSSCG00000030165) #35	PLA2G6 (ENSSSCG00000000110) #36
Chacoan peccary	MODERN SPECIES	871	GRAP2 (ENSCWAG00000014592)	ENTHD1 (ENSCWAG00000014673)	CACNA1I (ENSCWAG00000014744) #7	RPS19BP1 (ENSCWAG00000015053) #8	ATF4 (ENSCWAG00000015080) #9	MIEF1 (ENSCWAG00000015110) #10	MGAT3 (ENSCWAG00000015150) #11	TAB1 (ENSCWAG00000015165) #12	SYNGR1 (ENSCWAG00000015255) #13	RPL3 (ENSCWAG00000015302) #14	PDGFB (ENSCWAG00000015445) #15	CBX7 (ENSCWAG00000015534) #16	ENSCWAG00000015630 #17	CBX6 (ENSCWAG00000015646) #20	NPTXR (ENSCWAG00000015678) #21	DNAL4 (ENSCWAG00000015733) #22	SUN2 (ENSCWAG00000015783) #23	GTPBP1 (ENSCWAG00000015819) #24	JOSD1 (ENSCWAG00000015877) #25	TOMM22 (ENSCWAG00000015897) #26	CBY1 (ENSCWAG00000015914) #27	FAM227A (ENSCWAG00000015957) #28	DMC1 (ENSCWAG00000016302) #29	DDX17 (ENSCWAG00000016555) #30	KDELR3 (ENSCWAG00000016733) #31	KCNJ4 (ENSCWAG00000016756) #32	CSNK1E (ENSCWAG00000016780) #33	TMEM184B (ENSCWAG00000016850) #34	MAFF (ENSCWAG00000016878) #35	PLA2G6 (ENSCWAG00000016915) #36	BAIAP2L2 (ENSCWAG00000016975) #37
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Carnivora	ANCESTRAL SPECIES	3	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Caniformia	ANCESTRAL SPECIES	20	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Canidae	ANCESTRAL SPECIES	10	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l.p #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.p.a #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l.p #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.p.a #26	ENSGT00940000153137.a.a.e #27	ENSGT00940000162433 #28	ENSGT00390000015060.e.a.a	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Dingo	MODERN SPECIES	307	ATF4 (ENSCAFG00020002461) #9	MIEF1 (ENSCAFG00020002464) #10	ENSCAFG00020002487	MGAT3 (ENSCAFG00020002492) #11	TAB1 (ENSCAFG00020002497) #12	SYNGR1 (ENSCAFG00020002516) #13	ENSCAFG00020002524 #14	PDGFB (ENSCAFG00020002561) #15	CBX7 (ENSCAFG00020002567) #16	ENSCAFG00020002584 #17	ENSCAFG00020002615	ENSCAFG00020002641 #19	ENSCAFG00020002661 #19	CBX6 (ENSCAFG00020002691) #20	NPTXR (ENSCAFG00020002700) #21	DNAL4 (ENSCAFG00020002729) #22	SUN2 (ENSCAFG00020002742) #23	GTPBP1 (ENSCAFG00020002751) #24	JOSD1 (ENSCAFG00020002756) #25	ENSCAFG00020002761 #26	ENSCAFG00020002764 #27	ENSCAFG00020002773 #28	ENSCAFG00020002794	DMC1 (ENSCAFG00020002798) #29	DDX17 (ENSCAFG00020002867) #30	KDELR3 (ENSCAFG00020003482) #31	KCNJ4 (ENSCAFG00020003485) #32	CSNK1E (ENSCAFG00020003490) #33	TMEM184B (ENSCAFG00020003497) #34	MAFF (ENSCAFG00020003500) #35	PLA2G6 (ENSCAFG00020003501) #36
Dog	MODERN SPECIES	1	CACNA1I (ENSCAFG00845021242) #7	ATF4 (ENSCAFG00845021497) #9	MIEF1 (ENSCAFG00845021530) #10	TAB1 (ENSCAFG00845021610) #12	ENSCAFG00845021674	SYNGR1 (ENSCAFG00845021779) #13	RPL3 (ENSCAFG00845021864) #14	PDGFB (ENSCAFG00845022039) #15	CBX7 (ENSCAFG00845022140) #16	APOBEC3Z3 (ENSCAFG00845022251) #17	APOBEC3Z1 (ENSCAFG00845022347) #19	APOBEC3Z1 (ENSCAFG00845022387) #19	CBX6 (ENSCAFG00845022457) #20	NPTXR (ENSCAFG00845022551) #21	ENSCAFG00845022648	DNAL4 (ENSCAFG00845022699) #22	SUN2 (ENSCAFG00845022745) #23	GTPBP1 (ENSCAFG00845023003) #24	JOSD1 (ENSCAFG00845023184) #25	TOMM22 (ENSCAFG00845023216) #26	CBY1 (ENSCAFG00845023252) #27	FAM227A (ENSCAFG00845023331) #28	ENSCAFG00845023480	DMC1 (ENSCAFG00845023556) #29	DDX17 (ENSCAFG00845023692) #30	KDELR3 (ENSCAFG00845023852) #31	CSNK1E (ENSCAFG00845024113) #34	MAFF (ENSCAFG00845024590) #35	PLA2G6 (ENSCAFG00845024672) #36	BAIAP2L2 (ENSCAFG00845025037) #37	SLC16A8 (ENSCAFG00845025225)
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT01030000235747	ENSGT00940000160049.v #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049.v #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Ferret	MODERN SPECIES	171	CACNA1I (ENSMPUG00000013398) #7	RPS19BP1 (ENSMPUG00000013388) #8	ENSMPUG00000013386 #9	MIEF1 (ENSMPUG00000013381) #10	MGAT3 (ENSMPUG00000013377) #11	TAB1 (ENSMPUG00000013374) #12	SYNGR1 (ENSMPUG00000013354) #13	RPL3 (ENSMPUG00000013271) #14	PDGFB (ENSMPUG00000013265) #15	CBX7 (ENSMPUG00000013246) #16	ENSMPUG00000013243	ENSMPUG00000013239 #17	ENSMPUG00000013235 #19	ENSMPUG00000013233	CBX6 (ENSMPUG00000013198) #20	DNAL4 (ENSMPUG00000013186) #22	SUN2 (ENSMPUG00000013182) #23	GTPBP1 (ENSMPUG00000013174) #24	ENSMPUG00000013171 #25	TOMM22 (ENSMPUG00000013156) #26	CBY1 (ENSMPUG00000013150) #27	FAM227A (ENSMPUG00000013142) #28	DMC1 (ENSMPUG00000013137) #29	DDX17 (ENSMPUG00000013125) #30	KDELR3 (ENSMPUG00000013101) #31	KCNJ4 (ENSMPUG00000013098) #32	CSNK1E (ENSMPUG00000013092) #33	TMEM184B (ENSMPUG00000013087) #34	MAFF (ENSMPUG00000013085) #35	PLA2G6 (ENSMPUG00000013075) #36	BAIAP2L2 (ENSMPUG00000013062) #37
American mink	MODERN SPECIES	105	CACNA1I (ENSNVIG00000001170) #7	ENSNVIG00000001223 #8	ATF4 (ENSNVIG00000001233) #9	MIEF1 (ENSNVIG00000001239) #10	MGAT3 (ENSNVIG00000001259) #11	TAB1 (ENSNVIG00000001267) #12	SYNGR1 (ENSNVIG00000001331) #13	RPL3 (ENSNVIG00000001342) #14	PDGFB (ENSNVIG00000001399) #15	CBX7 (ENSNVIG00000001424) #16	ENSNVIG00000001462 #17	ENSNVIG00000001494	ENSNVIG00000001497 #19	CBX6 (ENSNVIG00000001513) #20	NPTXR (ENSNVIG00000001538) #21	DNAL4 (ENSNVIG00000001562) #22	SUN2 (ENSNVIG00000001578) #23	GTPBP1 (ENSNVIG00000001692) #24	JOS1 (ENSNVIG00000001730) #25	TOMM22 (ENSNVIG00000001744) #26	CBY1 (ENSNVIG00000001755) #27	FAM227A (ENSNVIG00000001762) #28	ENSNVIG00000001787 #29	DDX17 (ENSNVIG00000001807) #30	KDELR3 (ENSNVIG00000001872) #31	KCNJ4 (ENSNVIG00000001876) #32	CSNK1E (ENSNVIG00000001882) #33	TMEM184B (ENSNVIG00000001929) #34	PLA2G6 (ENSNVIG00000001952) #36	BAIAP2L2 (ENSNVIG00000002027) #37	SLC16A8 (ENSNVIG00000002093)
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a.j #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT01030000235747	ENSGT00940000160049.v #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Ursus	ANCESTRAL SPECIES	29	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a.j #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00950000185175	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT01030000235747	ENSGT00940000160049.v #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
American black bear	MODERN SPECIES	3312														CBX6 (ENSUAMG00000024502) #20	NPTXR (ENSUAMG00000024506) #21	DNAL4 (ENSUAMG00000024517) #22	SUN2 (ENSUAMG00000024518) #23	ENSUAMG00000024519 #24
Giant Panda	MODERN SPECIES	6	ENTHD1 (ENSAMEG00000010995)	CACNA1I (ENSAMEG00000010949) #7	ENSAMEG00000010936	ATF4 (ENSAMEG00000010932) #9	ENSAMEG00000010923 #10	MGAT3 (ENSAMEG00000010917) #11	TAB1 (ENSAMEG00000010877) #12	SYNGR1 (ENSAMEG00000010869) #13	RPL3 (ENSAMEG00000010853) #14	PDGFB (ENSAMEG00000010844) #15	ENSAMEG00000010840 #16	ENSAMEG00000010818 #17	ENSAMEG00000010815 #19	CBX6 (ENSAMEG00000029727) #20	NPTXR (ENSAMEG00000010791) #21	DNAL4 (ENSAMEG00000025581) #22	SUN2 (ENSAMEG00000010757) #23	GTPBP1 (ENSAMEG00000010713) #24	JOSD1 (ENSAMEG00000010702) #25	ENSAMEG00000027208 #27	FAM227A (ENSAMEG00000010571) #28	DMC1 (ENSAMEG00000010628) #29	DDX17 (ENSAMEG00000010601) #30	KDELR3 (ENSAMEG00000010587) #31	KCNJ4 (ENSAMEG00000028457) #32	CSNK1E (ENSAMEG00000010532) #33	TMEM184B (ENSAMEG00000010510) #34	PLA2G6 (ENSAMEG00000010431) #36	BAIAP2L2 (ENSAMEG00000010411) #37	SLC16A8 (ENSAMEG00000010398)	PICK1 (ENSAMEG00000010362)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Panthera	ANCESTRAL SPECIES		ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
leopard	MODERN SPECIES	13	RPS19BP1 (ENSPPRG00000000648) #8	ATF4 (ENSPPRG00000000736) #9	MIEF1 (ENSPPRG00000000881) #10	ENSPPRG00000021865	MGAT3 (ENSPPRG00000021876) #11	TAB1 (ENSPPRG00000002241) #12	SYNGR1 (ENSPPRG00000002501) #13	RPL3 (ENSPPRG00000002759) #14	PDGFB (ENSPPRG00000003082) #15	CBX7 (ENSPPRG00000003648) #16	ENSPPRG00000003675 #17	ENSPPRG00000003726	APOBEC3Z3 (ENSPPRG00000003941) #17	CBX6 (ENSPPRG00000004173) #20	NPTXR (ENSPPRG00000004972) #21	DNAL4 (ENSPPRG00000005125) #22	SUN2 (ENSPPRG00000005965) #23	GTPBP1 (ENSPPRG00000006069) #24	JOSD1 (ENSPPRG00000006382) #25	ENSPPRG00000006448 #26	CBY1 (ENSPPRG00000006584) #27	FAM227A (ENSPPRG00000007472) #28	DMC1 (ENSPPRG00000007856) #29	DDX17 (ENSPPRG00000008444) #30	KDELR3 (ENSPPRG00000008609) #31	KCNJ4 (ENSPPRG00000008729) #32	CSNK1E (ENSPPRG00000009011) #33	TMEM184B (ENSPPRG00000009569) #34	MAFF (ENSPPRG00000009597) #35	PLA2G6 (ENSPPRG00000010195) #36	BAIAP2L2 (ENSPPRG00000011792) #37
lion	MODERN SPECIES	7	FAM83F (ENSPLOG00000004760)	GRAP2 (ENSPLOG00000004745)	ENTHD1 (ENSPLOG00000004734)	CACNA1I (ENSPLOG00000004677) #7	RPS19BP1 (ENSPLOG00000004644) #8	ATF4 (ENSPLOG00000004642) #9	MIEF1 (ENSPLOG00000004635) #10	MGAT3 (ENSPLOG00000004630) #11	TAB1 (ENSPLOG00000004618) #12	SYNGR1 (ENSPLOG00000004593) #13	RPL3 (ENSPLOG00000004565) #14	PDGFB (ENSPLOG00000004554) #15	CBX7 (ENSPLOG00000004540) #16	CBX6 (ENSPLOG00000004523) #20	NPTXR (ENSPLOG00000004511) #21	DNAL4 (ENSPLOG00000004503) #22	SUN2 (ENSPLOG00000004486) #23	GTPBP1 (ENSPLOG00000004432) #24	JOSD1 (ENSPLOG00000004415) #25	TOMM22 (ENSPLOG00000004408) #26	CBY1 (ENSPLOG00000004398) #27	FAM227A (ENSPLOG00000004377) #28	DMC1 (ENSPLOG00000004321) #29	DDX17 (ENSPLOG00000004283) #30	KDELR3 (ENSPLOG00000004261) #31	ENSPLOG00000004249 #32	CSNK1E (ENSPLOG00000004227) #33	TMEM184B (ENSPLOG00000004201) #34	MAFF (ENSPLOG00000004192) #35	PLA2G6 (ENSPLOG00000004160) #36	BAIAP2L2 (ENSPLOG00000004122) #37
Tiger	MODERN SPECIES	130	FAM83F (ENSPTIG00000021999)	GRAP2 (ENSPTIG00000021945)	ENTHD1 (ENSPTIG00000021807)	CACNA1I (ENSPTIG00000020353) #7	RPS19BP1 (ENSPTIG00000019498) #8	ATF4 (ENSPTIG00000018524) #9	MIEF1 (ENSPTIG00000017698) #10	MGAT3 (ENSPTIG00000017328) #11	TAB1 (ENSPTIG00000016309) #12	SYNGR1 (ENSPTIG00000015249) #13	RPL3 (ENSPTIG00000014930) #14	PDGFB (ENSPTIG00000013725) #15	CBX7 (ENSPTIG00000013014) #16	ENSPTIG00000010283 #17	NPTXR (ENSPTIG00000009799) #21	DNAL4 (ENSPTIG00000009420) #22	SUN2 (ENSPTIG00000004612) #23	GTPBP1 (ENSPTIG00000021742) #24	JOSD1 (ENSPTIG00000021549) #25	TOMM22 (ENSPTIG00000021350) #26	CBY1 (ENSPTIG00000020240) #27	FAM227A (ENSPTIG00000016564) #28	DMC1 (ENSPTIG00000013693) #29	DDX17 (ENSPTIG00000008733) #30	KDELR3 (ENSPTIG00000006911) #31	CSNK1E (ENSPTIG00000021791) #33	TMEM184B (ENSPTIG00000020913) #34	PLA2G6 (ENSPTIG00000016175) #36	BAIAP2L2 (ENSPTIG00000012149) #37	PICK1 (ENSPTIG00000006829)	SOX10 (ENSPTIG00000004936)
Cat	MODERN SPECIES	238	ENTHD1 (ENSFCAG00000027518)	CACNA1I (ENSFCAG00000013500) #7	RPS19BP1 (ENSFCAG00000029275) #8	ATF4 (ENSFCAG00000009288) #9	MIEF1 (ENSFCAG00000022297) #10	ENSFCAG00000049023	MGAT3 (ENSFCAG00000015578) #11	TAB1 (ENSFCAG00000011951) #12	SYNGR1 (ENSFCAG00000038118) #13	RPL3 (ENSFCAG00000005820) #14	PDGFB (ENSFCAG00000015580) #15	CBX7 (ENSFCAG00000026160) #16	APOBEC3Z3 (ENSFCAG00000005251) #17	CBX6 (ENSFCAG00000045219) #20	NPTXR (ENSFCAG00000040183) #21	DNAL4 (ENSFCAG00000026836) #22	SUN2 (ENSFCAG00000030252) #23	GTPBP1 (ENSFCAG00000010897) #24	JOSD1 (ENSFCAG00000033794) #25	TOMM22 (ENSFCAG00000002820) #26	CBY1 (ENSFCAG00000031443) #27	FAM227A (ENSFCAG00000002819) #28	DMC1 (ENSFCAG00000037004) #29	DDX17 (ENSFCAG00000031570) #30	KDELR3 (ENSFCAG00000002816) #31	KCNJ4 (ENSFCAG00000030020) #32	CSNK1E (ENSFCAG00000002814) #33	TMEM184B (ENSFCAG00000023856) #34	MAFF (ENSFCAG00000044751) #35	PLA2G6 (ENSFCAG00000002812) #36	BAIAP2L2 (ENSFCAG00000002811) #37
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Chiroptera	ANCESTRAL SPECIES	23	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.l #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00960000192491	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1917																ENSMLUG00000027641 #22	SUN2 (ENSMLUG00000003774) #23	GTPBP1 (ENSMLUG00000003767) #24	JOSD1 (ENSMLUG00000003764) #25	ENSMLUG00000003761 #26	CBY1 (ENSMLUG00000003757) #27
Microbat	MODERN SPECIES	1870													ENSMLUG00000026309	ENSMLUG00000025155	ENSMLUG00000026489	ENSMLUG00000003315 #22
Greater horseshoe bat	MODERN SPECIES	1	ATF4 (ENSRFEG00010001415) #9	MIEF1 (ENSRFEG00010001437) #10	MGAT3 (ENSRFEG00010001449) #11	TAB1 (ENSRFEG00010001464) #12	SYNGR1 (ENSRFEG00010001514) #13	ENSRFEG00010001554 #14	PDGFB (ENSRFEG00010001632) #15	CBX7 (ENSRFEG00010001667) #16	ENSRFEG00010001693 #17	ENSRFEG00010001708	ENSRFEG00010001719	ENSRFEG00010001731 #19	ENSRFEG00010001823 #19	CBX6 (ENSRFEG00010001951) #20	NPTXR (ENSRFEG00010001973) #21	DNAL4 (ENSRFEG00010002031) #22	SUN2 (ENSRFEG00010001994) #23	GTPBP1 (ENSRFEG00010002057) #24	JOSD1 (ENSRFEG00010002118) #25	TOMM22 (ENSRFEG00010002135) #26	CBY1 (ENSRFEG00010002158) #27	FAM227A (ENSRFEG00010002201) #28	DMC1 (ENSRFEG00010002248) #29	DDX17 (ENSRFEG00010002319) #30	ENSRFEG00010002391	KDELR3 (ENSRFEG00010002412) #31	KCNJ4 (ENSRFEG00010002433) #32	CSNK1E (ENSRFEG00010002455) #33	TMEM184B (ENSRFEG00010002493) #34	MAFF (ENSRFEG00010002520) #35	PLA2G6 (ENSRFEG00010002556) #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000161265 #22
Hedgehog	MODERN SPECIES	373																DNAL4 (ENSEEUG00000013565) #22
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Primates	ANCESTRAL SPECIES	6	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Tarsier	MODERN SPECIES	6299														CBX6 (ENSTSYG00000028926) #20	NPTXR (ENSTSYG00000034628) #21	DNAL4 (ENSTSYG00000032235) #22	SUN2 (ENSTSYG00000002174) #23	GTPBP1 (ENSTSYG00000008856) #24	JOSD1 (ENSTSYG00000008846) #25	TOMM22 (ENSTSYG00000033257) #26	CBY1 (ENSTSYG00000001191) #27	FAM227A (ENSTSYG00000014703) #28
Simiiformes	ANCESTRAL SPECIES	27	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000164701	ENSGT00940000162695	ENSGT00940000161999.t.b #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Platyrrhini	ANCESTRAL SPECIES	30	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.b ##14	ENSGT00390000017606.a.a.i.a.b.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000161999.t.b #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.f #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Cebidae	ANCESTRAL SPECIES	31	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a.b #19	ENSGT00940000161999.t.a.a.a #19	ENSGT00940000164701	ENSGT00940000162695	ENSGT00940000161999.t.b #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.f #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Marmoset	MODERN SPECIES		MGAT3 (ENSCJAG00000045381) #11	TAB1 (ENSCJAG00000016297) #12	SYNGR1 (ENSCJAG00000086031) #13	RPL3 (ENSCJAG00000012574) ##14	PDGFB (ENSCJAG00000011366) #15	CBX7 (ENSCJAG00000012537) #16	APOBEC3H (ENSCJAG00000012524) #17	ENSCJAG00000085098 #19	ENSCJAG00000080759 #19	ENSCJAG00000012500 #19	ENSCJAG00000073371	APOBEC3A (ENSCJAG00000011578) #19	CBX6 (ENSCJAG00000056228) #20	NPTXR (ENSCJAG00000041862) #21	ENSCJAG00000022758	DNAL4 (ENSCJAG00000044212) #22	ENSCJAG00000081474	SUN2 (ENSCJAG00000011606) #23	GTPBP1 (ENSCJAG00000011652) #24	JOSD1 (ENSCJAG00000011713) #25	ENSCJAG00000011731 #26	CBY1 (ENSCJAG00000011737) #27	FAM227A (ENSCJAG00000011747) #28	DMC1 (ENSCJAG00000011766) #29	DDX17 (ENSCJAG00000011797) #30	KDELR3 (ENSCJAG00000011872) #31	KCNJ4 (ENSCJAG00000011954) #32	CSNK1E (ENSCJAG00000011879) #33	ENSCJAG00000083143	TMEM184B (ENSCJAG00000011962) #34	MAFF (ENSCJAG00000053088) #35
Cebidae_a	ANCESTRAL SPECIES	40	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a.b #19	ENSGT00940000161999.t.a.a.a #19	ENSGT00940000162695	ENSGT00940000161999.t.b #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.f #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Bolivian squirrel monkey	MODERN SPECIES	94	TAB1 (ENSSBOG00000019945) #12	SYNGR1 (ENSSBOG00000030746) #13	ENSSBOG00000025838 ##14	PDGFB (ENSSBOG00000030361) #15	ENSSBOG00000024323	CBX7 (ENSSBOG00000026317) #16	APOBEC3H (ENSSBOG00000030005) #17	ENSSBOG00000018208 #19	ENSSBOG00000023468 #19	ENSSBOG00000021384 #19	ENSSBOG00000032780	ENSSBOG00000029091 #19	ENSSBOG00000033710	CBX6 (ENSSBOG00000032596) #20	NPTXR (ENSSBOG00000035192) #21	DNAL4 (ENSSBOG00000036141) #22	SUN2 (ENSSBOG00000026240) #23	GTPBP1 (ENSSBOG00000029683) #24	ENSSBOG00000020433	JOSD1 (ENSSBOG00000023165) #25	ENSSBOG00000028449 #26	CBY1 (ENSSBOG00000027537) #27	FAM227A (ENSSBOG00000024182) #28	DMC1 (ENSSBOG00000026795) #29	DDX17 (ENSSBOG00000024547) #30	ENSSBOG00000022103	KDELR3 (ENSSBOG00000020752) #31	KCNJ4 (ENSSBOG00000006090) #32	CSNK1E (ENSSBOG00000032453) #33	TMEM184B (ENSSBOG00000030392) #34	MAFF (ENSSBOG00000030504) #35
Capuchin	MODERN SPECIES	404											ENSCCAG00000027450	ENSCCAG00000030932	ENSCCAG00000030928 #19	CBX6 (ENSCCAG00000022523) #20	NPTXR (ENSCCAG00000027126) #21	DNAL4 (ENSCCAG00000025723) #22	SUN2 (ENSCCAG00000029920) #23	GTPBP1 (ENSCCAG00000033843) #24	JOSD1 (ENSCCAG00000003460) #25	ENSCCAG00000036100 #26	CBY1 (ENSCCAG00000023785) #27	FAM227A (ENSCCAG00000018563) #28	ENSCCAG00000022215 #29	ENSCCAG00000026398	DDX17 (ENSCCAG00000024116) #30	KDELR3 (ENSCCAG00000015594) #31	KCNJ4 (ENSCCAG00000002994) #32	CSNK1E (ENSCCAG00000034371) #33	TMEM184B (ENSCCAG00000032854) #34	MAFF (ENSCCAG00000030181) #35	PLA2G6 (ENSCCAG00000034617) #36
Mas night monkey	MODERN SPECIES	1299	CACNA1I (ENSANAG00000037507) #7	RPS19BP1 (ENSANAG00000032140) #8	ATF4 (ENSANAG00000023629) #9	MIEF1 (ENSANAG00000027149) #10	MGAT3 (ENSANAG00000019053) #11	TAB1 (ENSANAG00000031987) #12	SYNGR1 (ENSANAG00000033277) #13	ENSANAG00000031094 ##14	PDGFB (ENSANAG00000036199) #15	CBX7 (ENSANAG00000029398) #16	APOBEC3H (ENSANAG00000025410) #17	ENSANAG00000020573 #19	ENSANAG00000030088	CBX6 (ENSANAG00000028570) #20	NPTXR (ENSANAG00000023380) #21	DNAL4 (ENSANAG00000027462) #22	SUN2 (ENSANAG00000024376) #23	GTPBP1 (ENSANAG00000037524) #24	ENSANAG00000032528	JOSD1 (ENSANAG00000032776) #25	ENSANAG00000033691 #26	CBY1 (ENSANAG00000023770) #27	FAM227A (ENSANAG00000030228) #28	DMC1 (ENSANAG00000032238) #29	DDX17 (ENSANAG00000035052) #30	KDELR3 (ENSANAG00000024533) #31	KCNJ4 (ENSANAG00000015534) #32	CSNK1E (ENSANAG00000034360) #33	TMEM184B (ENSANAG00000034651) #34	MAFF (ENSANAG00000020671) #35	PLA2G6 (ENSANAG00000037958) #36
Catarrhini	ANCESTRAL SPECIES	22	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000166105	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Hominoidea	ANCESTRAL SPECIES	22	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000166105	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Hominidae	ANCESTRAL SPECIES	21	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000166105	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	21	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.a	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.a	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000153430.a.b.q	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34
Pan	ANCESTRAL SPECIES	23	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.a	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00910000148162	ENSGT00940000153430.a.b.q	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34
Chimpanzee	MODERN SPECIES	13	ENSPTRG00000047023	TAB1 (ENSPTRG00000014395) #12	SYNGR1 (ENSPTRG00000041182) #13	RPL3 (ENSPTRG00000049360) ##14	PDGFB (ENSPTRG00000014392) #15	CBX7 (ENSPTRG00000014391) #16	APOBEC3H (ENSPTRG00000014390) #17	APOBEC3G (ENSPTRG00000014387) #19	APOBEC3C (ENSPTRG00000014385)	APOBEC3D (ENSPTRG00000041588)	ENSPTRG00000014382	APOBEC3B (ENSPTRG00000014384)	CBX6 (ENSPTRG00000051110) #20	ENSPTRG00000048123	NPTXR (ENSPTRG00000014380) #21	DNAL4 (ENSPTRG00000014379) #22	SUN2 (ENSPTRG00000023985) #23	ENSPTRG00000043000	GTPBP1 (ENSPTRG00000014376) #24	JOSD1 (ENSPTRG00000014375) #25	TOMM22 (ENSPTRG00000014374) #26	CBY1 (ENSPTRG00000014373) #27	FAM227A (ENSPTRG00000014372) #28	DMC1 (ENSPTRG00000014370) #29	ENSPTRG00000051975	DDX17 (ENSPTRG00000014369) #30	KDELR3 (ENSPTRG00000014367) #31	KCNJ4 (ENSPTRG00000050908) #32	CSNK1E (ENSPTRG00000014365) #33	TMEM184B (ENSPTRG00000022822) #34	MAFF (ENSPTRG00000029431) #35
Bonobo	MODERN SPECIES	13	ENSPPAG00000024946	TAB1 (ENSPPAG00000027760) #12	SYNGR1 (ENSPPAG00000043817) #13	RPL3 (ENSPPAG00000037466) ##14	PDGFB (ENSPPAG00000029810) #15	CBX7 (ENSPPAG00000028315) #16	APOBEC3H (ENSPPAG00000036522) #17	ENSPPAG00000033277 #19	ENSPPAG00000031519 #19	ENSPPAG00000028218	APOBEC3C (ENSPPAG00000014118)	APOBEC3B (ENSPPAG00000009288)	CBX6 (ENSPPAG00000037312) #20	ENSPPAG00000036694 #21	ENSPPAG00000035771	DNAL4 (ENSPPAG00000031504) #22	SUN2 (ENSPPAG00000038642) #23	ENSPPAG00000037574	ENSPPAG00000035397	GTPBP1 (ENSPPAG00000024682) #24	JOSD1 (ENSPPAG00000011451) #25	TOMM22 (ENSPPAG00000033147) #26	ENSPPAG00000031485 #27	FAM227A (ENSPPAG00000025902) #28	DMC1 (ENSPPAG00000039727) #29	ENSPPAG00000005436	DDX17 (ENSPPAG00000042301) #30	KDELR3 (ENSPPAG00000029491) #31	KCNJ4 (ENSPPAG00000021519) #32	CSNK1E (ENSPPAG00000034621) #33	TMEM184B (ENSPPAG00000025777) #34
Human	MODERN SPECIES	14	TAB1 (ENSG00000100324) #12	SYNGR1 (ENSG00000100321) #13	RPL3 (ENSG00000100316) ##14	PDGFB (ENSG00000100311) #15	CBX7 (ENSG00000100307) #16	APOBEC3H (ENSG00000100298) #17	APOBEC3G (ENSG00000239713) #19	APOBEC3F (ENSG00000128394)	APOBEC3D (ENSG00000243811)	ENSG00000284554	APOBEC3C (ENSG00000244509)	APOBEC3B (ENSG00000179750)	APOBEC3A (ENSG00000128383)	CBX6 (ENSG00000183741) #20	NPTXR (ENSG00000221890) #21	DNAL4 (ENSG00000100246) #22	SUN2 (ENSG00000100242) #23	GTPBP1 (ENSG00000100226) #24	JOSD1 (ENSG00000100221) #25	TOMM22 (ENSG00000100216) #26	CBY1 (ENSG00000100211) #27	FAM227A (ENSG00000184949) #28	DMC1 (ENSG00000100206) #29	DDX17 (ENSG00000100201) #30	KDELR3 (ENSG00000100196) #31	KCNJ4 (ENSG00000168135) #32	TPTEP2-CSNK1E (ENSG00000283900)	CSNK1E (ENSG00000213923) #33	TMEM184B (ENSG00000198792) #34	MAFF (ENSG00000185022) #35	PLA2G6 (ENSG00000184381) #36
Gorilla	MODERN SPECIES	13	RPS19BP1 (ENSGGOG00000010121) #8	ATF4 (ENSGGOG00000010115) #9	MIEF1 (ENSGGOG00000010109) #10	MGAT3 (ENSGGOG00000010107) #11	ENSGGOG00000042683	TAB1 (ENSGGOG00000008015) #12	ENSGGOG00000002326 ##14	PDGFB (ENSGGOG00000015535) #15	CBX7 (ENSGGOG00000004873) #16	APOBEC3G (ENSGGOG00000013750) #19	APOBEC3F (ENSGGOG00000038678)	ENSGGOG00000036587	APOBEC3B (ENSGGOG00000006721)	CBX6 (ENSGGOG00000043581) #20	NPTXR (ENSGGOG00000004660) #21	DNAL4 (ENSGGOG00000013527) #22	JOSD1 (ENSGGOG00000002091) #25	TOMM22 (ENSGGOG00000013230) #26	ENSGGOG00000013226 #27	ENSGGOG00000010896 #28	DMC1 (ENSGGOG00000011215) #29	ENSGGOG00000038849	DDX17 (ENSGGOG00000008309) #30	KDELR3 (ENSGGOG00000008303) #31	KCNJ4 (ENSGGOG00000000554) #32	CSNK1E (ENSGGOG00000016208) #33	TMEM184B (ENSGGOG00000007040) #34	MAFF (ENSGGOG00000021932) #35	PLA2G6 (ENSGGOG00000017087) #36	ENSGGOG00000022288	ENSGGOG00000005213
Gibbon	MODERN SPECIES	22	ENSNLEG00000034894	MGAT3 (ENSNLEG00000015255) #11	ENSNLEG00000027300	TAB1 (ENSNLEG00000015244) #12	SYNGR1 (ENSNLEG00000015237) #13	ENSNLEG00000015234 ##14	PDGFB (ENSNLEG00000015229) #15	CBX7 (ENSNLEG00000032032) #16	ENSNLEG00000015218 #17	ENSNLEG00000035811	APOBEC3C (ENSNLEG00000028392)	ENSNLEG00000015215	CBX6 (ENSNLEG00000015212) #20	ENSNLEG00000015211 #21	ENSNLEG00000032049	DNAL4 (ENSNLEG00000015207) #22	SUN2 (ENSNLEG00000015173) #23	ENSNLEG00000015170	GTPBP1 (ENSNLEG00000015164) #24	JOSD1 (ENSNLEG00000030934) #25	TOMM22 (ENSNLEG00000015159) #26	ENSNLEG00000015153 #27	FAM227A (ENSNLEG00000015147) #28	DMC1 (ENSNLEG00000015133) #29	DDX17 (ENSNLEG00000015117) #30	ENSNLEG00000032402	ENSNLEG00000028576 #31	CSNK1E (ENSNLEG00000015080) #33	TMEM184B (ENSNLEG00000015069) #34	MAFF (ENSNLEG00000015068) #35	PLA2G6 (ENSNLEG00000015026) #36
Cercopithecidae	ANCESTRAL SPECIES	24	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000153430.a.b.q	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Rhinopithecus	ANCESTRAL SPECIES	3	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00910000147557	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e.b	ENSGT00940000162695.f	ENSGT00940000164701	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000153430.a.b.q	ENSGT00940000156054 #24	ENSGT00910000147211	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00910000147308	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34
Golden snub-nosed monkey	MODERN SPECIES	2721	ATF4 (ENSRROG00000027427) #9	MIEF1 (ENSRROG00000043260) #10	MGAT3 (ENSRROG00000021928) #11	ENSRROG00000040942	TAB1 (ENSRROG00000032120) #12	SYNGR1 (ENSRROG00000029051) #13	ENSRROG00000044143 ##14	PDGFB (ENSRROG00000007216) #15	CBX7 (ENSRROG00000033680) #16	APOBEC3H (ENSRROG00000024699) #17	APOBEC3C (ENSRROG00000029045)	ENSRROG00000028557	APOBEC3G (ENSRROG00000028773)	CBX6 (ENSRROG00000040472) #20	NPTXR (ENSRROG00000038554) #21	DNAL4 (ENSRROG00000035941) #22	SUN2 (ENSRROG00000038392) #23	ENSRROG00000033588	GTPBP1 (ENSRROG00000044733) #24	ENSRROG00000042829	JOSD1 (ENSRROG00000031876) #25	TOMM22 (ENSRROG00000042007) #26	CBY1 (ENSRROG00000040566) #27	FAM227A (ENSRROG00000044925) #28	DMC1 (ENSRROG00000043002) #29	ENSRROG00000037265	DDX17 (ENSRROG00000045378) #30	KDELR3 (ENSRROG00000030931) #31	KCNJ4 (ENSRROG00000008366) #32	CSNK1E (ENSRROG00000040037) #33	TMEM184B (ENSRROG00000040391) #34
Black snub-nosed monkey	MODERN SPECIES	2192										ENSRBIG00000041382	ENSRBIG00000030323	ENSRBIG00000030834	ENSRBIG00000042829	CBX6 (ENSRBIG00000034668) #20	NPTXR (ENSRBIG00000044356) #21	DNAL4 (ENSRBIG00000039078) #22	SUN2 (ENSRBIG00000012940) #23	GTPBP1 (ENSRBIG00000031386) #24	ENSRBIG00000038483	JOSD1 (ENSRBIG00000044823) #25	CBY1 (ENSRBIG00000028112) #27	FAM227A (ENSRBIG00000042690) #28	DMC1 (ENSRBIG00000043621) #29	DDX17 (ENSRBIG00000031437) #30	KDELR3 (ENSRBIG00000002825) #31	KCNJ4 (ENSRBIG00000028503) #32	CSNK1E (ENSRBIG00000041727) #33	TMEM184B (ENSRBIG00000035414) #34	MAFF (ENSRBIG00000033621) #35	PLA2G6 (ENSRBIG00000043031) #36	BAIAP2L2 (ENSRBIG00000035446) #37
Cercopithecinae	ANCESTRAL SPECIES	21	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.d	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Vervet Monkey	MODERN SPECIES	10	RPS19BP1 (ENSCSAG00000006325) #8	ATF4 (ENSCSAG00000006330) #9	MIEF1 (ENSCSAG00000006338) #10	MGAT3 (ENSCSAG00000019280) #11	TAB1 (ENSCSAG00000006353) #12	SYNGR1 (ENSCSAG00000006356) #13	PDGFB (ENSCSAG00000006359) #15	CBX7 (ENSCSAG00000006361) #16	APOBEC3H (ENSCSAG00000006371) #17	APOBEC3G (ENSCSAG00000006376) #19	APOBEC3F (ENSCSAG00000006382)	APOBEC3C (ENSCSAG00000006402)	ENSCSAG00000006445	CBX6 (ENSCSAG00000006449) #20	NPTXR (ENSCSAG00000006453) #21	DNAL4 (ENSCSAG00000006458) #22	SUN2 (ENSCSAG00000006487) #23	GTPBP1 (ENSCSAG00000006496) #24	JOSD1 (ENSCSAG00000006502) #25	TOMM22 (ENSCSAG00000006519) #26	CBY1 (ENSCSAG00000006551) #27	FAM227A (ENSCSAG00000006575) #28	DMC1 (ENSCSAG00000006610) #29	DDX17 (ENSCSAG00000006649) #30	KDELR3 (ENSCSAG00000006680) #31	KCNJ4 (ENSCSAG00000019279) #32	CSNK1E (ENSCSAG00000006688) #33	TMEM184B (ENSCSAG00000006716) #34	MAFF (ENSCSAG00000006757) #35	PLA2G6 (ENSCSAG00000006793) #36	BAIAP2L2 (ENSCSAG00000006819) #37
Cercopithecinae_a	ANCESTRAL SPECIES	20	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.d	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00910000147211.a	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Macaca	ANCESTRAL SPECIES	20	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.f	ENSGT00940000164701.d	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00910000147211.a	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Pig-tailed macaque	MODERN SPECIES	329	MIEF1 (ENSMNEG00000043758) #10	MGAT3 (ENSMNEG00000023793) #11	TAB1 (ENSMNEG00000042373) #12	SYNGR1 (ENSMNEG00000043797) #13	RPL3 (ENSMNEG00000027367) ##14	PDGFB (ENSMNEG00000038207) #15	CBX7 (ENSMNEG00000044086) #16	APOBEC3H (ENSMNEG00000039259) #17	APOBEC3G (ENSMNEG00000038847) #19	APOBEC3D (ENSMNEG00000043316)	APOBEC3C (ENSMNEG00000045196)	ENSMNEG00000043211	CBX6 (ENSMNEG00000033013) #20	NPTXR (ENSMNEG00000029685) #21	ENSMNEG00000001210	DNAL4 (ENSMNEG00000035772) #22	SUN2 (ENSMNEG00000016085) #23	GTPBP1 (ENSMNEG00000035572) #24	JOSD1 (ENSMNEG00000000474) #25	ENSMNEG00000041860	TOMM22 (ENSMNEG00000031409) #26	CBY1 (ENSMNEG00000025697) #27	FAM227A (ENSMNEG00000037270) #28	DMC1 (ENSMNEG00000031051) #29	DDX17 (ENSMNEG00000022218) #30	KDELR3 (ENSMNEG00000030497) #31	KCNJ4 (ENSMNEG00000001095) #32	CSNK1E (ENSMNEG00000028250) #33	TMEM184B (ENSMNEG00000013220) #34	MAFF (ENSMNEG00000044039) #35	PLA2G6 (ENSMNEG00000036111) #36
Macaca_a	ANCESTRAL SPECIES	20	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.a.a.b.a.a.b.a.a	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695.f	ENSGT00940000164701.c.a	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00910000147211.a	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.b.b.a.b.a.b	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.b.a.b.b.a.a	ENSGT00940000161112 #35
Crab-eating macaque	MODERN SPECIES	1	MIEF1 (ENSMFAG00000040624) #10	MGAT3 (ENSMFAG00000014328) #11	TAB1 (ENSMFAG00000032126) #12	ENSMFAG00000060205	ENSMFAG00000034609 #13	RPL3 (ENSMFAG00000031439) ##14	ENSMFAG00000048170	PDGFB (ENSMFAG00000031697) #15	ENSMFAG00000064646	CBX7 (ENSMFAG00000034255) #16	APOBEC3H (ENSMFAG00000031827) #17	ENSMFAG00000048585	ENSMFAG00000057689	ENSMFAG00000062247 #20	NPTXR (ENSMFAG00000000252) #21	ENSMFAG00000051185 #22	SUN2 (ENSMFAG00000021939) #23	GTPBP1 (ENSMFAG00000037252) #24	ENSMFAG00000060377	JOSD1 (ENSMFAG00000038103) #25	ENSMFAG00000050968	TOMM22 (ENSMFAG00000044855) #26	ENSMFAG00000041976 #27	FAM227A (ENSMFAG00000000358) #28	ENSMFAG00000059738	DMC1 (ENSMFAG00000045466) #29	DDX17 (ENSMFAG00000046051) #30	KDELR3 (ENSMFAG00000042286) #31	CSNK1E (ENSMFAG00000003325) #33	ENSMFAG00000051239	PLA2G6 (ENSMFAG00000046328) #36
Rhesus	MODERN SPECIES	1	MGAT3 (ENSMMUG00000052578) #11	TAB1 (ENSMMUG00000012103) #12	ENSMMUG00000056662	SYNGR1 (ENSMMUG00000012101) #13	RPL3 (ENSMMUG00000010029) ##14	PDGFB (ENSMMUG00000002739) #15	CBX7 (ENSMMUG00000007845) #16	ENSMMUG00000059320	APOBEC3H (ENSMMUG00000001016) #17	APOBEC3G (ENSMMUG00000039346) #19	ENSMMUG00000004017	APOBEC3B (ENSMMUG00000004015)	APOBEC3A (ENSMMUG00000042504)	CBX6 (ENSMMUG00000048395) #20	NPTXR (ENSMMUG00000004869) #21	DNAL4 (ENSMMUG00000004868) #22	SUN2 (ENSMMUG00000007284) #23	GTPBP1 (ENSMMUG00000007277) #24	JOSD1 (ENSMMUG00000021083) #25	TOMM22 (ENSMMUG00000000364) #26	CBY1 (ENSMMUG00000017680) #27	FAM227A (ENSMMUG00000012467) #28	ENSMMUG00000061118	DDX17 (ENSMMUG00000004304) #30	KDELR3 (ENSMMUG00000004303) #31	KCNJ4 (ENSMMUG00000040628) #32	CSNK1E (ENSMMUG00000010122) #33	ENSMMUG00000058776	PLA2G6 (ENSMMUG00000002701) #36	MAFF (ENSMMUG00000045506) #35	BAIAP2L2 (ENSMMUG00000002699) #37
Cercopithecinae_b	ANCESTRAL SPECIES	22	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.d	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00910000147211.a	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Olive baboon	MODERN SPECIES	7	ENSPANG00000051106	RPS19BP1 (ENSPANG00000015140) #8	ATF4 (ENSPANG00000025194) #9	MIEF1 (ENSPANG00000018614) #10	MGAT3 (ENSPANG00000035060) #11	TAB1 (ENSPANG00000023491) #12	SYNGR1 (ENSPANG00000030042) #13	RPL3 (ENSPANG00000006976) ##14	PDGFB (ENSPANG00000015141) #15	CBX7 (ENSPANG00000049315) #16	APOBEC3H (ENSPANG00000010774) #17	APOBEC3G (ENSPANG00000006941) #19	APOBEC3C (ENSPANG00000010775)	CBX6 (ENSPANG00000038194) #20	NPTXR (ENSPANG00000025006) #21	ENSPANG00000041247 #22	SUN2 (ENSPANG00000020414) #23	GTPBP1 (ENSPANG00000013808) #24	JOSD1 (ENSPANG00000050059) #25	TOMM22 (ENSPANG00000039136) #26	CBY1 (ENSPANG00000020416) #27	FAM227A (ENSPANG00000026317) #28	DMC1 (ENSPANG00000021763) #29	DDX17 (ENSPANG00000015143) #30	KDELR3 (ENSPANG00000035955) #31	KCNJ4 (ENSPANG00000010777) #32	CSNK1E (ENSPANG00000018853) #33	TMEM184B (ENSPANG00000012334) #34	MAFF (ENSPANG00000020550) #35	PLA2G6 (ENSPANG00000020907) #36	BAIAP2L2 (ENSPANG00000050215) #37
Cercopithecinae_d	ANCESTRAL SPECIES	17	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.b.a.b.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.t.a #19	ENSGT00940000162695.e	ENSGT00940000162695.f	ENSGT00940000164701.d	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00910000147154	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00910000147211.a	ENSGT00390000016475.e.b #26	ENSGT00940000153137.a.a.g #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Sooty mangabey	MODERN SPECIES	103	ATF4 (ENSCATG00000030431) #9	MIEF1 (ENSCATG00000031438) #10	MGAT3 (ENSCATG00000016197) #11	TAB1 (ENSCATG00000035309) #12	SYNGR1 (ENSCATG00000012730) #13	RPL3 (ENSCATG00000044047) ##14	PDGFB (ENSCATG00000042932) #15	CBX7 (ENSCATG00000039873) #16	APOBEC3H (ENSCATG00000030302) #17	ENSCATG00000013527	ENSCATG00000033502	ENSCATG00000028713 #19	APOBEC3C (ENSCATG00000043226)	CBX6 (ENSCATG00000035766) #20	NPTXR (ENSCATG00000040839) #21	DNAL4 (ENSCATG00000035845) #22	SUN2 (ENSCATG00000041848) #23	GTPBP1 (ENSCATG00000037701) #24	JOSD1 (ENSCATG00000031097) #25	TOMM22 (ENSCATG00000041194) #26	CBY1 (ENSCATG00000022660) #27	FAM227A (ENSCATG00000042291) #28	DMC1 (ENSCATG00000037008) #29	DDX17 (ENSCATG00000035701) #30	KDELR3 (ENSCATG00000039752) #31	KCNJ4 (ENSCATG00000018874) #32	CSNK1E (ENSCATG00000016744) #33	TMEM184B (ENSCATG00000034314) #34	MAFF (ENSCATG00000027873) #35
Drill	MODERN SPECIES	751	MIEF1 (ENSMLEG00000039210) #10	MGAT3 (ENSMLEG00000023697) #11	TAB1 (ENSMLEG00000036113) #12	SYNGR1 (ENSMLEG00000035954) #13	RPL3 (ENSMLEG00000027655) ##14	PDGFB (ENSMLEG00000039646) #15	CBX7 (ENSMLEG00000040573) #16	APOBEC3H (ENSMLEG00000033417) #17	APOBEC3G (ENSMLEG00000024444) #19	APOBEC3F (ENSMLEG00000029642)	APOBEC3C (ENSMLEG00000036992)	ENSMLEG00000004809	ENSMLEG00000041526	ENSMLEG00000008447 #21	ENSMLEG00000023932	DNAL4 (ENSMLEG00000030084) #22	SUN2 (ENSMLEG00000032997) #23	GTPBP1 (ENSMLEG00000031750) #24	JOSD1 (ENSMLEG00000039536) #25	ENSMLEG00000035278	TOMM22 (ENSMLEG00000037973) #26	CBY1 (ENSMLEG00000021451) #27	FAM227A (ENSMLEG00000031706) #28	DMC1 (ENSMLEG00000029700) #29	DDX17 (ENSMLEG00000029141) #30	KDELR3 (ENSMLEG00000031427) #31	KCNJ4 (ENSMLEG00000026932) #32	CSNK1E (ENSMLEG00000037565) #33	TMEM184B (ENSMLEG00000039789) #34	MAFF (ENSMLEG00000032784) #35	PLA2G6 (ENSMLEG00000041279) #36
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162695.h	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Bushbaby	MODERN SPECIES	122	GRAP2 (ENSOGAG00000002666)	ENTHD1 (ENSOGAG00000002664)	CACNA1I (ENSOGAG00000002655) #7	RPS19BP1 (ENSOGAG00000000039) #8	ATF4 (ENSOGAG00000033566) #9	MIEF1 (ENSOGAG00000000037) #10	MGAT3 (ENSOGAG00000029148) #11	TAB1 (ENSOGAG00000000035) #12	ENSOGAG00000000032 #14	PDGFB (ENSOGAG00000000031) #15	CBX7 (ENSOGAG00000000029) #16	ENSOGAG00000032498	ENSOGAG00000024822 #19	ENSOGAG00000032518 #19	CBX6 (ENSOGAG00000027969) #20	DNAL4 (ENSOGAG00000000516) #22	SUN2 (ENSOGAG00000000515) #23	GTPBP1 (ENSOGAG00000000514) #24	JOSD1 (ENSOGAG00000007520) #25	ENSOGAG00000029583 #26	CBY1 (ENSOGAG00000028533) #27	FAM227A (ENSOGAG00000032247) #28	DMC1 (ENSOGAG00000003237) #29	DDX17 (ENSOGAG00000001539) #30	KDELR3 (ENSOGAG00000001537) #31	KCNJ4 (ENSOGAG00000001534) #32	CSNK1E (ENSOGAG00000001532) #33	TMEM184B (ENSOGAG00000000862) #34	MAFF (ENSOGAG00000027848) #35	PLA2G6 (ENSOGAG00000009998) #36	BAIAP2L2 (ENSOGAG00000033044) #37
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162695.h	ENSGT00940000161999.o #19	ENSGT00940000161999.p #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Mouse lemur	MODERN SPECIES	29	MIEF1 (ENSMICG00000011441) #10	MGAT3 (ENSMICG00000034125) #11	ENSMICG00000048095	TAB1 (ENSMICG00000011424) #12	SYNGR1 (ENSMICG00000015846) #13	RPL3 (ENSMICG00000015832) #14	PDGFB (ENSMICG00000028335) #15	CBX7 (ENSMICG00000033358) #16	ENSMICG00000042733	ENSMICG00000041647	ENSMICG00000042615	ENSMICG00000043748 #19	ENSMICG00000047191 #19	CBX6 (ENSMICG00000029779) #20	NPTXR (ENSMICG00000006434) #21	DNAL4 (ENSMICG00000038096) #22	SUN2 (ENSMICG00000011818) #23	GTPBP1 (ENSMICG00000034218) #24	JOSD1 (ENSMICG00000045787) #25	TOMM22 (ENSMICG00000036077) #26	CBY1 (ENSMICG00000011786) #27	FAM227A (ENSMICG00000011770) #28	DMC1 (ENSMICG00000009723) #29	ENSMICG00000042647	DDX17 (ENSMICG00000011601) #30	KDELR3 (ENSMICG00000011590) #31	KCNJ4 (ENSMICG00000045155) #32	CSNK1E (ENSMICG00000011583) #33	TMEM184B (ENSMICG00000038265) #34	MAFF (ENSMICG00000028915) #35	PLA2G6 (ENSMICG00000011552) #36
Lemuriformes_a	ANCESTRAL SPECIES	38	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162695.h	ENSGT00940000161999.o #19	ENSGT00940000161999.p #19	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Coquerels sifaka	MODERN SPECIES	131	CACNA1I (ENSPCOG00000019621) #7	RPS19BP1 (ENSPCOG00000013622) #8	ATF4 (ENSPCOG00000020903) #9	MIEF1 (ENSPCOG00000023412) #10	MGAT3 (ENSPCOG00000011823) #11	TAB1 (ENSPCOG00000022423) #12	SYNGR1 (ENSPCOG00000014563) #13	ENSPCOG00000027786 #14	PDGFB (ENSPCOG00000010090) #15	CBX7 (ENSPCOG00000018587) #16	ENSPCOG00000022067	ENSPCOG00000017606 #19	ENSPCOG00000016357 #19	CBX6 (ENSPCOG00000021741) #20	NPTXR (ENSPCOG00000024056) #21	DNAL4 (ENSPCOG00000024283) #22	SUN2 (ENSPCOG00000016449) #23	GTPBP1 (ENSPCOG00000028734) #24	JOSD1 (ENSPCOG00000026479) #25	TOMM22 (ENSPCOG00000027136) #26	ENSPCOG00000027064 #27	FAM227A (ENSPCOG00000019885) #28	DMC1 (ENSPCOG00000024951) #29	ENSPCOG00000027948	DDX17 (ENSPCOG00000014360) #30	KDELR3 (ENSPCOG00000014879) #31	KCNJ4 (ENSPCOG00000009264) #32	CSNK1E (ENSPCOG00000016147) #33	TMEM184B (ENSPCOG00000027866) #34	MAFF (ENSPCOG00000023065) #35	PLA2G6 (ENSPCOG00000015052) #36
Greater bamboo lemur	MODERN SPECIES	231	CACNA1I (ENSPSMG00000003753) #7	RPS19BP1 (ENSPSMG00000003768) #8	ATF4 (ENSPSMG00000003773) #9	MIEF1 (ENSPSMG00000003809) #10	ENSPSMG00000003819	MGAT3 (ENSPSMG00000003826) #11	TAB1 (ENSPSMG00000003941) #12	SYNGR1 (ENSPSMG00000004013) #13	ENSPSMG00000004038 #14	PDGFB (ENSPSMG00000004067) #15	CBX7 (ENSPSMG00000004086) #16	ENSPSMG00000004595	ENSPSMG00000004995	CBX6 (ENSPSMG00000005006) #20	ENSPSMG00000005024 #21	DNAL4 (ENSPSMG00000005030) #22	SUN2 (ENSPSMG00000005062) #23	GTPBP1 (ENSPSMG00000005095) #24	JOSD1 (ENSPSMG00000005106) #25	TOMM22 (ENSPSMG00000005113) #26	CBY1 (ENSPSMG00000005125) #27	FAM227A (ENSPSMG00000005162) #28	DMC1 (ENSPSMG00000005197) #29	DDX17 (ENSPSMG00000005267) #30	KDELR3 (ENSPSMG00000005334) #31	KCNJ4 (ENSPSMG00000005338) #32	CSNK1E (ENSPSMG00000005408) #33	TMEM184B (ENSPSMG00000005494) #34	MAFF (ENSPSMG00000005501) #35	PLA2G6 (ENSPSMG00000005585) #36	BAIAP2L2 (ENSPSMG00000005799) #37
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Glires	ANCESTRAL SPECIES	4	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Lagomorpha	ANCESTRAL SPECIES	130					ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.i.a.a.b ##14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Pika	MODERN SPECIES	5233															ENSOPRG00000003511 #21	DNAL4 (ENSOPRG00000003496) #22
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00950000185175	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00390000014000.j	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Guinea pig	MODERN SPECIES	28	FAM83F (ENSCPOG00000014133)	GRAP2 (ENSCPOG00000040713)	ENTHD1 (ENSCPOG00000014129)	CACNA1I (ENSCPOG00000011963) #7	RPS19BP1 (ENSCPOG00000037075) #8	ATF4 (ENSCPOG00000022485) #9	MIEF1 (ENSCPOG00000033670) #10	TAB1 (ENSCPOG00000024643) #12	SYNGR1 (ENSCPOG00000035790) #13	RPL3 (ENSCPOG00000010038) #14	PDGFB (ENSCPOG00000005394) #15	CBX7 (ENSCPOG00000037430) #16	ENSCPOG00000009257 #17	CBX6 (ENSCPOG00000035677) #20	NPTXR (ENSCPOG00000025747) #21	DNAL4 (ENSCPOG00000035992) #22	ENSCPOG00000035460	SUN2 (ENSCPOG00000005965) #23	GTPBP1 (ENSCPOG00000007667) #24	JOSD1 (ENSCPOG00000038167) #25	TOMM22 (ENSCPOG00000036347) #26	CBY1 (ENSCPOG00000020801) #27	DMC1 (ENSCPOG00000014221) #29	DDX17 (ENSCPOG00000011790) #30	KDELR3 (ENSCPOG00000025069) #31	KCNJ4 (ENSCPOG00000024834) #32	CSNK1E (ENSCPOG00000005641) #33	TMEM184B (ENSCPOG00000001351) #34	PLA2G6 (ENSCPOG00000027302) #36	BAIAP2L2 (ENSCPOG00000009775) #37	SLC16A8 (ENSCPOG00000024290)
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00390000014000.j	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Degu	MODERN SPECIES	105	ENTHD1 (ENSODEG00000013716)	CACNA1I (ENSODEG00000012240) #7	RPS19BP1 (ENSODEG00000012767) #8	ATF4 (ENSODEG00000012791) #9	MIEF1 (ENSODEG00000012181) #10	MGAT3 (ENSODEG00000013842) #11	TAB1 (ENSODEG00000015803) #12	SYNGR1 (ENSODEG00000016219) #13	ENSODEG00000013672 #14	PDGFB (ENSODEG00000012860) #15	CBX7 (ENSODEG00000013496) #16	ENSODEG00000020029	ENSODEG00000012358	ENSODEG00000012367 #20	NPTXR (ENSODEG00000012380) #21	DNAL4 (ENSODEG00000013596) #22	SUN2 (ENSODEG00000012534) #23	ENSODEG00000019931	GTPBP1 (ENSODEG00000012443) #24	ENSODEG00000011619	ENSODEG00000011910 #25	ENSODEG00000012101 #26	CBY1 (ENSODEG00000012784) #27	DMC1 (ENSODEG00000013866) #29	DDX17 (ENSODEG00000013118) #30	KDELR3 (ENSODEG00000013049) #31	KCNJ4 (ENSODEG00000012639) #32	CSNK1E (ENSODEG00000013427) #33	TMEM184B (ENSODEG00000012793) #34	MAFF (ENSODEG00000012952) #35	PLA2G6 (ENSODEG00000012170) #36
Long-tailed chinchilla	MODERN SPECIES	120	GRAP2 (ENSCLAG00000016753)	ENTHD1 (ENSCLAG00000016698)	CACNA1I (ENSCLAG00000016706) #7	RPS19BP1 (ENSCLAG00000016707) #8	ATF4 (ENSCLAG00000017308) #9	MIEF1 (ENSCLAG00000016517) #10	MGAT3 (ENSCLAG00000016469) #11	TAB1 (ENSCLAG00000015972) #12	SYNGR1 (ENSCLAG00000015444) #13	RPL3 (ENSCLAG00000016387) #14	PDGFB (ENSCLAG00000016860) #15	CBX7 (ENSCLAG00000017313) #16	ENSCLAG00000016615 #17	CBX6 (ENSCLAG00000017119) #20	NPTXR (ENSCLAG00000016215) #21	DNAL4 (ENSCLAG00000015601) #22	ENSCLAG00000016664	SUN2 (ENSCLAG00000016978) #23	GTPBP1 (ENSCLAG00000016782) #24	JOSD1 (ENSCLAG00000016585) #25	ENSCLAG00000016480 #26	CBY1 (ENSCLAG00000017105) #27	DMC1 (ENSCLAG00000017343) #29	DDX17 (ENSCLAG00000017294) #30	KDELR3 (ENSCLAG00000017280) #31	KCNJ4 (ENSCLAG00000016724) #32	CSNK1E (ENSCLAG00000016892) #33	TMEM184B (ENSCLAG00000016941) #34	MAFF (ENSCLAG00000016603) #35	PLA2G6 (ENSCLAG00000016964) #36	ENSCLAG00000016427 #37
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398.h #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000162695	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398.h #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Alpin marmot	MODERN SPECIES	11												ENSMMMG00000013861 #17	ENSMMMG00000013876	ENSMMMG00000013952 #20	NPTXR (ENSMMMG00000013956) #21	DNAL4 (ENSMMMG00000013967) #22	SUN2 (ENSMMMG00000013976) #23	GTPBP1 (ENSMMMG00000014017) #24	JOSD1 (ENSMMMG00000014025) #25	TOMM22 (ENSMMMG00000014030) #26	CBY1 (ENSMMMG00000014042) #27	DMC1 (ENSMMMG00000014064) #29	DDX17 (ENSMMMG00000014113) #30	KDELR3 (ENSMMMG00000014277) #31	KCNJ4 (ENSMMMG00000014283) #32	CSNK1E (ENSMMMG00000014289) #33	TMEM184B (ENSMMMG00000014319) #34	PLA2G6 (ENSMMMG00000014384) #36	BAIAP2L2 (ENSMMMG00000014561) #37	SLC16A8 (ENSMMMG00000014593)	PICK1 (ENSMMMG00000014628)
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00940000154431.e.a.e.a	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398.h #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Squirrel	MODERN SPECIES	92	ENTHD1 (ENSSTOG00000002219)	CACNA1I (ENSSTOG00000025056) #7	RPS19BP1 (ENSSTOG00000008459) #8	ATF4 (ENSSTOG00000025355) #9	MIEF1 (ENSSTOG00000028799) #10	MGAT3 (ENSSTOG00000006745) #11	TAB1 (ENSSTOG00000002357) #12	SYNGR1 (ENSSTOG00000023819) #13	ENSSTOG00000025552	RPL3 (ENSSTOG00000014559) #14	PDGFB (ENSSTOG00000022345) #15	CBX7 (ENSSTOG00000013366) #16	ENSSTOG00000007125 #17	CBX6 (ENSSTOG00000022213) #20	NPTXR (ENSSTOG00000032195) #21	DNAL4 (ENSSTOG00000022336) #22	SUN2 (ENSSTOG00000026929) #23	GTPBP1 (ENSSTOG00000010766) #24	JOSD1 (ENSSTOG00000024999) #25	TOMM22 (ENSSTOG00000030828) #26	CBY1 (ENSSTOG00000010750) #27	DMC1 (ENSSTOG00000025006) #29	DDX17 (ENSSTOG00000013699) #30	KDELR3 (ENSSTOG00000002629) #31	KCNJ4 (ENSSTOG00000025708) #32	CSNK1E (ENSSTOG00000005334) #33	TMEM184B (ENSSTOG00000005322) #34	MAFF (ENSSTOG00000025460) #35	PLA2G6 (ENSSTOG00000005291) #36	BAIAP2L2 (ENSSTOG00000025451) #37	SLC16A8 (ENSSTOG00000020426)
Arctic ground squirrel	MODERN SPECIES	496						TAB1 (ENSUPAG00010022276) #12	SYNGR1 (ENSUPAG00010022277) #13	ENSUPAG00010022279	ENSUPAG00010022280 #14	PDGFB (ENSUPAG00010022290) #15	CBX7 (ENSUPAG00010022291) #16	ENSUPAG00010022294 #17	ENSUPAG00010022297 #17	CBX6 (ENSUPAG00010022300) #20	NPTXR (ENSUPAG00010022301) #21	DNAL4 (ENSUPAG00010022304) #22	SUN2 (ENSUPAG00010022310) #23	GTPBP1 (ENSUPAG00010022325) #24	JOSD1 (ENSUPAG00010022326) #25	TOMM22 (ENSUPAG00010022327) #26	CBY1 (ENSUPAG00010022328) #27	ENSUPAG00010022332 #28	DMC1 (ENSUPAG00010022336) #29	DDX17 (ENSUPAG00010022338) #30	KDELR3 (ENSUPAG00010022341) #31	KCNJ4 (ENSUPAG00010022342) #32	CSNK1E (ENSUPAG00010022344) #33	TMEM184B (ENSUPAG00010022345) #34	MAFF (ENSUPAG00010022348) #35	PLA2G6 (ENSUPAG00010022350) #36	BAIAP2L2 (ENSUPAG00010022356) #37
Eurasian red squirrel	MODERN SPECIES	14	CACNA1I (ENSSVLG00005016425) #7	RPS19BP1 (ENSSVLG00005016320) #8	ATF4 (ENSSVLG00005016294) #9	MIEF1 (ENSSVLG00005016249) #10	MGAT3 (ENSSVLG00005016225) #11	TAB1 (ENSSVLG00005016109) #12	SYNGR1 (ENSSVLG00005016019) #13	RPL3 (ENSSVLG00005015871) #14	PDGFB (ENSSVLG00005015796) #15	CBX7 (ENSSVLG00005015711) #16	ENSSVLG00005015660 #16	ENSSVLG00005015640 #16	ENSSVLG00005015177 #17	CBX6 (ENSSVLG00005015114) #20	NPTXR (ENSSVLG00005015045) #21	DNAL4 (ENSSVLG00005014974) #22	SUN2 (ENSSVLG00005014778) #23	GTPBP1 (ENSSVLG00005014719) #24	JOSD1 (ENSSVLG00005014656) #25	ENSSVLG00005014630 #26	ENSSVLG00005014587 #27	FAM227A (ENSSVLG00005014554) #28	DMC1 (ENSSVLG00005014240) #29	DDX17 (ENSSVLG00005014127) #30	KDELR3 (ENSSVLG00005014043) #31	KCNJ4 (ENSSVLG00005014012) #32	ENSSVLG00005013745 #33	TMEM184B (ENSSVLG00005013270) #34	MAFF (ENSSVLG00005013238) #35	PLA2G6 (ENSSVLG00005013158) #36	BAIAP2L2 (ENSSVLG00005012886) #37
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Kangaroo rat	MODERN SPECIES	398	Fam83f (ENSDORG00000013192)	Grap2 (ENSDORG00000015414)	Enthd1 (ENSDORG00000025046)	Cacna1i (ENSDORG00000005080) #7	Rps19bp1 (ENSDORG00000026673) #8	Atf4 (ENSDORG00000004952) #9	Mief1 (ENSDORG00000023252) #10	Tab1 (ENSDORG00000012343) #12	Syngr1 (ENSDORG00000001564) #13	Rpl3 (ENSDORG00000012849) #14	Pdgfb (ENSDORG00000010253) #15	Cbx7 (ENSDORG00000010065) #16	ENSDORG00000027271 #17	ENSDORG00000030017 #21	ENSDORG00000029752 #21	ENSDORG00000029143 #22	Sun2 (ENSDORG00000015797) #23	Gtpbp1 (ENSDORG00000015795) #24	Josd1 (ENSDORG00000025284) #25	Tomm22 (ENSDORG00000015791) #26	Dmc1 (ENSDORG00000015717) #29	Ddx17 (ENSDORG00000003358) #30	Kdelr3 (ENSDORG00000005281) #31	Kcnj4 (ENSDORG00000007221) #32	Csnk1e (ENSDORG00000009978) #33	Tmem184b (ENSDORG00000029807) #34	Maff (ENSDORG00000013449) #35	Pla2g6 (ENSDORG00000002589) #36	ENSDORG00000002587 #37	Slc16a8 (ENSDORG00000002585)	Pick1 (ENSDORG00000002791)
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Lesser Egyptian jerboa	MODERN SPECIES	42	Tnrc6b (ENSJJAG00000015779)	Fam83f (ENSJJAG00000011999)	Grap2 (ENSJJAG00000014224)	Cacna1i (ENSJJAG00000018253) #7	Rps19bp1 (ENSJJAG00000013931) #8	ENSJJAG00000015146 #9	Mief1 (ENSJJAG00000015759) #10	Mgat3 (ENSJJAG00000014337) #11	Tab1 (ENSJJAG00000011785) #12	Syngr1 (ENSJJAG00000014672) #13	Rpl3 (ENSJJAG00000015596) #14	Pdgfb (ENSJJAG00000016430) #15	Cbx7 (ENSJJAG00000017220) #16	ENSJJAG00000016840 #17	Nptxr (ENSJJAG00000014759) #21	ENSJJAG00000014301 #22	Sun2 (ENSJJAG00000014510) #23	Gtpbp1 (ENSJJAG00000011437) #24	Josd1 (ENSJJAG00000011112) #25	ENSJJAG00000011941 #26	Cby1 (ENSJJAG00000014095) #27	Fam227a (ENSJJAG00000009801) #28	Dmc1 (ENSJJAG00000015648) #29	Ddx17 (ENSJJAG00000011350) #30	Kdelr3 (ENSJJAG00000010108) #31	Kcnj4 (ENSJJAG00000008916) #32	Csnk1e (ENSJJAG00000009630) #33	Tmem184b (ENSJJAG00000017531) #34	Maff (ENSJJAG00000017200) #35	Pla2g6 (ENSJJAG00000013671) #36	Baiap2l2 (ENSJJAG00000013471) #37
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1577	Fam83f (ENSNGAG00000020952)	Grap2 (ENSNGAG00000016490)	Enthd1 (ENSNGAG00000018535)	Cacna1i (ENSNGAG00000007523) #7	Rps19bp1 (ENSNGAG00000017027) #8	Atf4 (ENSNGAG00000007824) #9	ENSNGAG00000013450 #10	Mgat3 (ENSNGAG00000018263) #11	Tab1 (ENSNGAG00000013198) #12	Syngr1 (ENSNGAG00000005324) #13	Rpl3 (ENSNGAG00000011936) #14	Pdgfb (ENSNGAG00000018908) #15	Cbx7 (ENSNGAG00000017652) #16	Apobec3 (ENSNGAG00000018998) #17	Nptxr (ENSNGAG00000021020) #21	ENSNGAG00000006712 #22	Sun2 (ENSNGAG00000012091) #23	Gtpbp1 (ENSNGAG00000010065) #24	Josd1 (ENSNGAG00000015006) #25	Tomm22 (ENSNGAG00000001315) #26	Cby1 (ENSNGAG00000014472) #27	ENSNGAG00000017016	Dmc1 (ENSNGAG00000018320) #29	Ddx17 (ENSNGAG00000004001) #30	Kdelr3 (ENSNGAG00000011665) #31	Kcnj4 (ENSNGAG00000011248) #32	Csnk1e (ENSNGAG00000019350) #33	Tmem184b (ENSNGAG00000012726) #34	Maff (ENSNGAG00000005792) #35	Pla2g6 (ENSNGAG00000009639) #36	Baiap2l2 (ENSNGAG00000018064) #37
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000166105	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Rat	DUPLICATION
Rat	MODERN SPECIES	17	Cacna1i (ENSRNOG00000060407) #7	Rps19bp1 (ENSRNOG00000017847) #8	Atf4 (ENSRNOG00000017801) #9	Gm55359 (ENSRNOG00000067422)	Mief1 (ENSRNOG00000017553) #10	Tab1 (ENSRNOG00000017285) #12	Mgat3 (ENSRNOG00000017434) #11	Syngr1 (ENSRNOG00000017108) #13	Rpl3 (ENSRNOG00000016896) #14	Pdgfb (ENSRNOG00000017197) #15	Cbx7 (ENSRNOG00000016875) #16	AC128476.2 (ENSRNOG00000057782)	Apobec3 (ENSRNOG00000016852) #17	Cbx6 (ENSRNOG00000046955) #20	Nptxr (ENSRNOG00000016156) #21	Dnal4 (ENSRNOG00000015583) #22	Sun2 (ENSRNOG00000015177) #23	Gtpbp1 (ENSRNOG00000014634) #24	Josd1 (ENSRNOG00000014440) #25	Tomm22 (ENSRNOG00000014058) #26	Fam227a (ENSRNOG00000021795) #28	Dmc1 (ENSRNOG00000013807) #29	Ddx17 (ENSRNOG00000051170) #30	Kdelr3 (ENSRNOG00000013577) #31	Kcnj4 (ENSRNOG00000013869) #32	Csnk1e (ENSRNOG00000013076) #33	Tmem184b (ENSRNOG00000022802) #34	Maff (ENSRNOG00000012886) #35	Pla2g6 (ENSRNOG00000012295) #36	Baiap2l2 (ENSRNOG00000012215) #37	Slc16a8 (ENSRNOG00000012090)
Rat	MODERN SPECIES	12	Ank3 (ENSRNOG00000053288)	Dynlt2b-ps1 (ENSRNOG00000000630)	Cdk1 (ENSRNOG00000000632)	Rhobtb1 (ENSRNOG00000000633)	Tmem26 (ENSRNOG00000027859)	Cabcoco1 (ENSRNOG00000000634)	Arid5b (ENSRNOG00000000635)	Rtkn2 (ENSRNOG00000000636)	Rtkn2 (ENSRNOG00000067849)	Zfp365 (ENSRNOG00000000638)	Ado (ENSRNOG00000070733)	Egr2 (ENSRNOG00000000640)	Nrbf2 (ENSRNOG00000000641)	Jmjd1c (ENSRNOG00000000648)	Reep3 (ENSRNOG00000000645)	Dnal4-ps1 (ENSRNOG00000067902) #22	Rpl36al-ps5 (ENSRNOG00000032408)	ENSRNOG00000070329	ENSRNOG00000070306	Ctnna3 (ENSRNOG00000000373)	Lrrtm3 (ENSRNOG00000026466)	ENSRNOG00000069858	LOC108349010 (ENSRNOG00000000376)	ENSRNOG00000066776	Dnajc12 (ENSRNOG00000051960)	Sirt1 (ENSRNOG00000051592)	Herc4 (ENSRNOG00000061040)	Mypn (ENSRNOG00000000383)	Atoh7 (ENSRNOG00000000384)	Pbld1 (ENSRNOG00000000386)	Pbld2 (ENSRNOG00000069854)
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Northern American deer mouse	MODERN SPECIES	12	Cacna1i (ENSPEMG00000017848) #7	Rps19bp1 (ENSPEMG00000009206) #8	Mief1 (ENSPEMG00000000881) #10	ENSPEMG00000001379	Gm55359 (ENSPEMG00000025628)	Mgat3 (ENSPEMG00000017229) #11	Tab1 (ENSPEMG00000000776) #12	Syngr1 (ENSPEMG00000017114) #13	Rpl3 (ENSPEMG00000012563) #14	Pdgfb (ENSPEMG00000010524) #15	Cbx7 (ENSPEMG00000017298) #16	ENSPEMG00000030420	Apobec3 (ENSPEMG00000000456) #17	Cbx6 (ENSPEMG00000026924) #20	Nptxr (ENSPEMG00000014192) #21	ENSPEMG00000025592 #22	Sun2 (ENSPEMG00000005360) #23	Gtpbp1 (ENSPEMG00000022105) #24	Josd1 (ENSPEMG00000028718) #25	Tomm22 (ENSPEMG00000022564) #26	Cby1 (ENSPEMG00000028273) #27	Fam227a (ENSPEMG00000021220) #28	Dmc1 (ENSPEMG00000021139) #29	Ddx17 (ENSPEMG00000021115) #30	Kdelr3 (ENSPEMG00000025485) #31	Kcnj4 (ENSPEMG00000020978) #32	Csnk1e (ENSPEMG00000020952) #33	Tmem184b (ENSPEMG00000007707) #34	Maff (ENSPEMG00000029295) #35	Pla2g6 (ENSPEMG00000000395) #36	Baiap2l2 (ENSPEMG00000017444) #37
Prairie vole	MODERN SPECIES	2	Fam83f (ENSMOCG00000003997)	Grap2 (ENSMOCG00000011546)	Enthd1 (ENSMOCG00000005157)	Cacna1i (ENSMOCG00000015926) #7	Rps19bp1 (ENSMOCG00000015370) #8	Atf4 (ENSMOCG00000016614) #9	Mief1 (ENSMOCG00000011535) #10	Mgat3 (ENSMOCG00000015359) #11	Tab1 (ENSMOCG00000017456) #12	Syngr1 (ENSMOCG00000019576) #13	ENSMOCG00000000700 #14	Pdgfb (ENSMOCG00000002403) #15	Cbx7 (ENSMOCG00000004891) #16	Apobec3 (ENSMOCG00000021576) #17	Nptxr (ENSMOCG00000017145) #21	ENSMOCG00000003313 #22	Sun2 (ENSMOCG00000022083) #23	Gtpbp1 (ENSMOCG00000022043) #24	Josd1 (ENSMOCG00000007178) #25	Tomm22 (ENSMOCG00000001931) #26	Cby1 (ENSMOCG00000015695) #27	Fam227a (ENSMOCG00000007156) #28	Dmc1 (ENSMOCG00000006879) #29	Ddx17 (ENSMOCG00000010769) #30	Kdelr3 (ENSMOCG00000015416) #31	Kcnj4 (ENSMOCG00000001301) #32	Csnk1e (ENSMOCG00000019912) #33	Tmem184b (ENSMOCG00000022894) #34	Maff (ENSMOCG00000016841) #35	Pla2g6 (ENSMOCG00000016706) #36	Baiap2l2 (ENSMOCG00000022974) #37
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475.h #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Chinese hamster chok1gshd	MODERN SPECIES	1	Grap2 (ENSCGRG00001021712)	Enthd1 (ENSCGRG00001021361)	Cacna1i (ENSCGRG00001022652) #7	Rps19bp1 (ENSCGRG00001023983) #8	Atf4 (ENSCGRG00001018678) #9	Mief1 (ENSCGRG00001018126) #10	Mgat3 (ENSCGRG00001010541) #11	ENSCGRG00001021963 #12	Syngr1 (ENSCGRG00001021733) #13	Rpl3 (ENSCGRG00001021342) #14	Pdgfb (ENSCGRG00001019045) #15	Cbx7 (ENSCGRG00001018782) #16	Apobec3 (ENSCGRG00001022976) #17	Cbx6 (ENSCGRG00001023499) #20	Nptxr (ENSCGRG00001020831) #21	ENSCGRG00001020627 #22	Sun2 (ENSCGRG00001017050) #23	Gtpbp1 (ENSCGRG00001016791) #24	Josd1 (ENSCGRG00001018907) #25	Tomm22 (ENSCGRG00001018593) #26	Cby1 (ENSCGRG00001022945) #27	Fam227a (ENSCGRG00001011936) #28	Dmc1 (ENSCGRG00001005679) #29	Ddx17 (ENSCGRG00001023050) #30	Kdelr3 (ENSCGRG00001017350) #31	Kcnj4 (ENSCGRG00001009281) #32	Csnk1e (ENSCGRG00001020326) #33	Tmem184b (ENSCGRG00001019130) #34	Maff (ENSCGRG00001023276) #35	Pla2g6 (ENSCGRG00001016761) #36	Baiap2l2 (ENSCGRG00001016205) #37
Golden Hamster	MODERN SPECIES	626	Fam83f (ENSMAUG00000015744)	Grap2 (ENSMAUG00000008300)	Enthd1 (ENSMAUG00000006247)	Cacna1i (ENSMAUG00000008968) #7	Rps19bp1 (ENSMAUG00000012429) #8	Atf4 (ENSMAUG00000012102) #9	Mief1 (ENSMAUG00000004657) #10	Mgat3 (ENSMAUG00000001637) #11	ENSMAUG00000021992 #12	Syngr1 (ENSMAUG00000002156) #13	Rpl3 (ENSMAUG00000021888) #14	Pdgfb (ENSMAUG00000010966) #15	Cbx7 (ENSMAUG00000021987) #16	Apobec3 (ENSMAUG00000011683) #17	Nptxr (ENSMAUG00000021222) #21	ENSMAUG00000006203 #22	ENSMAUG00000012155	Josd1 (ENSMAUG00000020861) #25	ENSMAUG00000020296 #26	Cby1 (ENSMAUG00000012412) #27	Dmc1 (ENSMAUG00000021747) #29	Ddx17 (ENSMAUG00000020476) #30	ENSMAUG00000019903	Kdelr3 (ENSMAUG00000007336) #31	Kcnj4 (ENSMAUG00000020839) #32	Csnk1e (ENSMAUG00000003914) #33	Tmem184b (ENSMAUG00000013044) #34	Maff (ENSMAUG00000008846) #35	Pla2g6 (ENSMAUG00000021718) #36	Baiap2l2 (ENSMAUG00000018411) #37	Slc16a8 (ENSMAUG00000020465)
Atlantogenata	ANCESTRAL SPECIES	36	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.a #20	ENSGT00940000166105	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Afrotheria	ANCESTRAL SPECIES	33	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999 #19	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Afrotheria_a	ANCESTRAL SPECIES	33	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000162772 #17	ENSGT00940000161999.u #19	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Elephant	MODERN SPECIES	544	CACNA1I (ENSLAFG00000006106) #7	RPS19BP1 (ENSLAFG00000027819) #8	ATF4 (ENSLAFG00000012020) #9	MIEF1 (ENSLAFG00000012013) #10	TAB1 (ENSLAFG00000000210) #12	SYNGR1 (ENSLAFG00000013345) #13	RPL3 (ENSLAFG00000007806) #14	ENSLAFG00000026337	PDGFB (ENSLAFG00000007803) #15	CBX7 (ENSLAFG00000023057) #16	ENSLAFG00000027404 #17	ENSLAFG00000020906 #19	ENSLAFG00000008890 #19	ENSLAFG00000005275 #19	ENSLAFG00000022237 #21	DNAL4 (ENSLAFG00000026658) #22	SUN2 (ENSLAFG00000010302) #23	GTPBP1 (ENSLAFG00000010667) #24	JOSD1 (ENSLAFG00000016134) #25	TOMM22 (ENSLAFG00000016128) #26	CBY1 (ENSLAFG00000016123) #27	ENSLAFG00000016113 #28	DMC1 (ENSLAFG00000009698) #29	ENSLAFG00000009820	KDELR3 (ENSLAFG00000009818) #31	KCNJ4 (ENSLAFG00000000660) #32	CSNK1E (ENSLAFG00000021640) #33	TMEM184B (ENSLAFG00000005618) #34	MAFF (ENSLAFG00000022547) #35	PLA2G6 (ENSLAFG00000005615) #36	BAIAP2L2 (ENSLAFG00000009419) #37
Tenrec	MODERN SPECIES	16918																DNAL4 (ENSETEG00000018064) #22
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT01100000264836	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.i.a #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
Wallaby	MODERN SPECIES	10434																DNAL4 (ENSMEUG00000012975) #22
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j.i.a #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00940000160024.bb #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37
koala	MODERN SPECIES	13	FAM83F (ENSPCIG00000020369)	GRAP2 (ENSPCIG00000020373)	ENSPCIG00000020377	CACNA1I (ENSPCIG00000020380) #7	ENSPCIG00000037425 #8	ATF4 (ENSPCIG00000020405) #9	MIEF1 (ENSPCIG00000020413) #10	ENSPCIG00000032178	MGAT3 (ENSPCIG00000020418) #11	TAB1 (ENSPCIG00000020421) #12	ENSPCIG00000012360 #14	PDGFB (ENSPCIG00000035143) #15	ENSPCIG00000023848 #16	CBX6 (ENSPCIG00000023845) #20	ENSPCIG00000023843 #21	DNAL4 (ENSPCIG00000023840) #22	ENSPCIG00000015138 #23	GTPBP1 (ENSPCIG00000015134) #24	JOSD1 (ENSPCIG00000015965) #25	TOMM22 (ENSPCIG00000015967) #26	CBY1 (ENSPCIG00000015972) #27	ENSPCIG00000015975 #28	DMC1 (ENSPCIG00000000606) #29	DDX17 (ENSPCIG00000001652) #30	KDELR3 (ENSPCIG00000031954) #31	KCNJ4 (ENSPCIG00000014291) #32	CSNK1E (ENSPCIG00000015116) #33	TMEM184B (ENSPCIG00000035715) #34	MAFF (ENSPCIG00000032591) #35	PLA2G6 (ENSPCIG00000011299) #36	BAIAP2L2 (ENSPCIG00000011307) #37
Common wonbat	MODERN SPECIES	135	FAM83F (ENSVURG00010002796)	GRAP2 (ENSVURG00010002813)	ENSVURG00010002821	CACNA1I (ENSVURG00010002838) #7	ENSVURG00010002916 #8	ATF4 (ENSVURG00010002924) #9	ENSVURG00010002936 #10	ENSVURG00010002947	MGAT3 (ENSVURG00010002955) #11	TAB1 (ENSVURG00010002960) #12	SYNGR1 (ENSVURG00010002976) #13	ENSVURG00010003000 #14	PDGFB (ENSVURG00010003027) #15	ENSVURG00010003049 #16	NPTXR (ENSVURG00010003064) #21	DNAL4 (ENSVURG00010003082) #22	SUN2 (ENSVURG00010003098) #23	GTPBP1 (ENSVURG00010003124) #24	JOSD1 (ENSVURG00010003141) #25	TOMM22 (ENSVURG00010003152) #26	CBY1 (ENSVURG00010003156) #27	DMC1 (ENSVURG00010003187) #29	DDX17 (ENSVURG00010003233) #30	KDELR3 (ENSVURG00010003257) #31	KCNJ4 (ENSVURG00010003269) #32	CSNK1E (ENSVURG00010003285) #33	TMEM184B (ENSVURG00010003313) #34	MAFF (ENSVURG00010003336) #35	PLA2G6 (ENSVURG00010003344) #36	BAIAP2L2 (ENSVURG00010003365) #37	SLC16A8 (ENSVURG00010003397)
Platypus	MODERN SPECIES	5	ADSL (ENSOANG00000014669)	TNRC6B (ENSOANG00000014668)	ENSOANG00000050214	GRAP2 (ENSOANG00000014667)	ENSOANG00000014666	CACNA1I (ENSOANG00000014664) #7	ATF4 (ENSOANG00000011026) #9	MIEF1 (ENSOANG00000038974) #10	MGAT3 (ENSOANG00000004010) #11	TAB1 (ENSOANG00000049562) #12	SYNGR1 (ENSOANG00000044683) #13	RPL3 (ENSOANG00000013665) #14	ENSOANG00000006889 #15	CBX7 (ENSOANG00000011360) #16	NPTXR (ENSOANG00000002781) #21	DNAL4 (ENSOANG00000010585) #22	ENSOANG00000044946	SUN2 (ENSOANG00000010580) #23	GTPBP1 (ENSOANG00000010579) #24	JOSD1 (ENSOANG00000010578) #25	TOMM22 (ENSOANG00000010575) #26	CBY1 (ENSOANG00000010574) #27	DMC1 (ENSOANG00000010570) #29	DDX17 (ENSOANG00000010568) #30	KDELR3 (ENSOANG00000032016) #31	KCNJ4 (ENSOANG00000040844) #32	CSNK1E (ENSOANG00000010565) #33	TMEM184B (ENSOANG00000004485) #34	MAFF (ENSOANG00000037605) #35	PLA2G6 (ENSOANG00000014673) #36	BAIAP2L2 (ENSOANG00000014677) #37
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT01030000235747	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33
Lizard	MODERN SPECIES	4	ENSACAG00000007459	ENSACAG00000041503	CACNA1I (ENSACAG00000007474) #7	RPS19BP1 (ENSACAG00000007571) #8	ATF4 (ENSACAG00000007573) #9	MIEF1 (ENSACAG00000035471) #10	ENSACAG00000044498	MGAT3 (ENSACAG00000007610) #11	ENSACAG00000043646	TAB1 (ENSACAG00000007616) #12	SYNGR1 (ENSACAG00000025152) #13	ENSACAG00000007688 #14	PDGFB (ENSACAG00000028762) #15	CBX7 (ENSACAG00000007796) #16	CBX6 (ENSACAG00000007811) #20	DNAL4 (ENSACAG00000007885) #22	ENSACAG00000007891	SUN2 (ENSACAG00000007922) #23	GTPBP1 (ENSACAG00000008070) #24	JOSD1 (ENSACAG00000008117) #25	TOMM22 (ENSACAG00000039405) #26	CBY1 (ENSACAG00000037585) #27	ENSACAG00000028833 #28	DMC1 (ENSACAG00000008148) #29	GALR2 (ENSACAG00000043562)	ENSACAG00000015450	GCAT (ENSACAG00000015453)	TRIOBP (ENSACAG00000015492)	NOL12 (ENSACAG00000015549)	ENSACAG00000015571	ENSACAG00000042568
Elapidae	ANCESTRAL SPECIES	3	ENSGT00940000155369.A	ENSGT00390000007395	ENSGT00940000156480	ENSGT00940000154514	ENSGT00390000005033	ENSGT00940000158712	ENSGT00940000158586	ENSGT00940000155959	ENSGT00940000158296	ENSGT00950000183197.a	ENSGT00390000011381	ENSGT00940000156697	ENSGT00390000014666.b	ENSGT00940000156000	ENSGT00940000155736.D.c.b	ENSGT00940000161265 #22	ENSGT00940000157924	ENSGT00940000157246	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00940000155369.A	ENSGT00390000007395	ENSGT00940000156480	ENSGT00940000154514	ENSGT00390000005033	ENSGT00940000158712	ENSGT00940000158586	ENSGT00940000155959	ENSGT00940000158296	ENSGT00950000183197.a	ENSGT00390000011381	ENSGT00940000156697	ENSGT00390000014666.b	ENSGT00940000156000	ENSGT00940000155736.D.c.b	ENSGT00940000161265 #22	ENSGT00940000157924	ENSGT00940000157246	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00940000155369.A	ENSGT00390000007395	ENSGT00940000156480	ENSGT00940000154514	ENSGT00390000005033	ENSGT00940000158712	ENSGT00940000158586	ENSGT00940000155959	ENSGT00940000158296	ENSGT00950000183197.a	ENSGT00390000011381	ENSGT00940000156697	ENSGT00390000014666.b	ENSGT00940000156000	ENSGT00940000155736.D.c.b	ENSGT00940000161265 #22	ENSGT00940000157924	ENSGT00940000157246	ENSGT00390000013811	ENSGT01030000234542.b.b.a.a.a.b	ENSGT01030000234542.b.b.b	ENSGT00940000164495	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635
Mainland tiger snake	MODERN SPECIES	35	MDGA2 (ENSNSUG00000015231)	ENSNSUG00000015232	FANCM (ENSNSUG00000015233)	FKBP3 (ENSNSUG00000015234)	PRPF39 (ENSNSUG00000015235)	TOGARAM1 (ENSNSUG00000015367)	KLHL28 (ENSNSUG00000015368)	TMX1 (ENSNSUG00000015369)	LRFN5 (ENSNSUG00000015371)	CYB561 (ENSNSUG00000015372)	ZNF511 (ENSNSUG00000015381)	TUBGCP2 (ENSNSUG00000015382)	ERLIN1 (ENSNSUG00000015652)	ENSNSUG00000015653	ENSNSUG00000015654	DNAL4 (ENSNSUG00000016067) #22	AP1M1 (ENSNSUG00000016071)	ENSNSUG00000016073	FAM32A (ENSNSUG00000016075)	ENSNSUG00000016076	ENSNSUG00000016077	ENSNSUG00000016079	ENSNSUG00000016080	ENSNSUG00000016081	CALR3 (ENSNSUG00000016082)	ENSNSUG00000016083	CHERP (ENSNSUG00000016084)	SLC35E1 (ENSNSUG00000016089)	MED26 (ENSNSUG00000016091)	SMIM7 (ENSNSUG00000016093)	TMEM38A (ENSNSUG00000016095)
Eastern brown snake	MODERN SPECIES	10	ENSPTXG00000000094	ENSPTXG00000000133	FKBP3 (ENSPTXG00000000177)	PRPF39 (ENSPTXG00000000212)	TOGARAM1 (ENSPTXG00000000260)	KLHL28 (ENSPTXG00000000359)	TMX1 (ENSPTXG00000000371)	LRFN5 (ENSPTXG00000000392)	ENSPTXG00000000417	CYB561 (ENSPTXG00000000423)	ZNF511 (ENSPTXG00000000437)	TUBGCP2 (ENSPTXG00000000447)	ERLIN1 (ENSPTXG00000000470)	CWF19L1 (ENSPTXG00000000484)	ENSPTXG00000000603	DNAL4 (ENSPTXG00000001449) #22	AP1M1 (ENSPTXG00000001454)	ENSPTXG00000001459	FAM32A (ENSPTXG00000001464)	ENSPTXG00000001467	ENSPTXG00000001468	ENSPTXG00000001470	EPS15L1 (ENSPTXG00000001534)	CALR3 (ENSPTXG00000001988)	CHERP (ENSPTXG00000001995)	SLC35E1 (ENSPTXG00000002000)	MED26 (ENSPTXG00000002002)	SMIM7 (ENSPTXG00000002005)	TMEM38A (ENSPTXG00000002007)	NWD1 (ENSPTXG00000002008)	SIN3B (ENSPTXG00000002012)
Blue-lipped sea krait	MODERN SPECIES	3316															ENSLLTG00000018264	DNAL4 (ENSLLTG00000018266) #22	AP1M1 (ENSLLTG00000018270)	ENSLLTG00000018273	FAM32A (ENSLLTG00000018275)	ENSLLTG00000018278
Indian cobra	MODERN SPECIES		MDGA2 (ENSNNAG00000009818)	ENSNNAG00000009972	ENSNNAG00000010032	FKBP3 (ENSNNAG00000010071)	PRPF39 (ENSNNAG00000010118)	TOGARAM1 (ENSNNAG00000004817)	KLHL28 (ENSNNAG00000004915)	TMX1 (ENSNNAG00000004938)	LRFN5 (ENSNNAG00000004968)	CYB561 (ENSNNAG00000004990)	ZNF511 (ENSNNAG00000005032)	TUBGCP2 (ENSNNAG00000005043)	ERLIN1 (ENSNNAG00000005087)	CWF19L1 (ENSNNAG00000005113)	ENSNNAG00000005147	DNAL4 (ENSNNAG00000005165) #22	AP1M1 (ENSNNAG00000005186)	ENSNNAG00000005213	FAM32A (ENSNNAG00000005236)	ENSNNAG00000005262	ENSNNAG00000005285	ENSNNAG00000005296	EPS15L1 (ENSNNAG00000005344)	CALR3 (ENSNNAG00000005559)	ENSNNAG00000005659	CHERP (ENSNNAG00000005709)	SLC35E1 (ENSNNAG00000005958)	MED26 (ENSNNAG00000005983)	SMIM7 (ENSNNAG00000005990)	TMEM38A (ENSNNAG00000006014)	NWD1 (ENSNNAG00000006059)
Laterata	ANCESTRAL SPECIES	6	ENSGT00940000157307.e	ENSGT00940000157307.f	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00390000000560.y.a	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Common wall lizard	MODERN SPECIES	1	FAM83F (ENSPMRG00000021645)	ENSPMRG00000021649	GRAP2 (ENSPMRG00000021650)	ENTHD1 (ENSPMRG00000021657)	CACNA1I (ENSPMRG00000021848) #7	RPS19BP1 (ENSPMRG00000022604) #8	ATF4 (ENSPMRG00000022605) #9	MIEF1 (ENSPMRG00000022610) #10	MGAT3 (ENSPMRG00000022618) #11	TAB1 (ENSPMRG00000022622) #12	RPL3 (ENSPMRG00000022641) #14	PDGFB (ENSPMRG00000022651) #15	CBX7 (ENSPMRG00000022660) #16	CBX6 (ENSPMRG00000022664) #20	NPTXR (ENSPMRG00000022669) #21	DNAL4 (ENSPMRG00000022673) #22	ENSPMRG00000022677	SUN2 (ENSPMRG00000022685) #23	GTPBP1 (ENSPMRG00000022692) #24	JOSD1 (ENSPMRG00000022704) #25	TOMM22 (ENSPMRG00000022709) #26	CBY1 (ENSPMRG00000022715) #27	DMC1 (ENSPMRG00000022723) #29	ENSPMRG00000022734	KDELR3 (ENSPMRG00000022738) #31	KCNJ4 (ENSPMRG00000009070) #32	ENSPMRG00000009071	CSNK1E (ENSPMRG00000009084) #33	TMEM184B (ENSPMRG00000009101) #34	MAFF (ENSPMRG00000009108) #35	PLA2G6 (ENSPMRG00000009123) #36
Argentine black and white tegu	MODERN SPECIES	6	ENSSMRG00000015585	ENSSMRG00000015586	ENSSMRG00000015587	CACNA1I (ENSSMRG00000015591) #7	RPS19BP1 (ENSSMRG00000015649) #8	ATF4 (ENSSMRG00000015650) #9	MIEF1 (ENSSMRG00000015651) #10	MGAT3 (ENSSMRG00000015652) #11	TAB1 (ENSSMRG00000015653) #12	SYNGR1 (ENSSMRG00000015654) #13	RPL3 (ENSSMRG00000015655) #14	PDGFB (ENSSMRG00000015658) #15	CBX7 (ENSSMRG00000015659) #16	CBX6 (ENSSMRG00000015661) #20	NPTXR (ENSSMRG00000015662) #21	DNAL4 (ENSSMRG00000015663) #22	ENSSMRG00000015664	SUN2 (ENSSMRG00000015665) #23	GTPBP1 (ENSSMRG00000015666) #24	JOSD1 (ENSSMRG00000015668) #25	TOMM22 (ENSSMRG00000015669) #26	CBY1 (ENSSMRG00000015670) #27	DMC1 (ENSSMRG00000015673) #29	ENSSMRG00000015674	KDELR3 (ENSSMRG00000015675) #31	KCNJ4 (ENSSMRG00000015677) #32	CSNK1E (ENSSMRG00000015678) #33	ENSSMRG00000015679	TMEM184B (ENSSMRG00000015680) #34	ENSSMRG00000015681	MAFF (ENSSMRG00000015682) #35
tuatara	MODERN SPECIES	1481				RPS19BP1 (ENSSPUG00000010405) #8	ATF4 (ENSSPUG00000010419) #9	MIEF1 (ENSSPUG00000010431) #10	MGAT3 (ENSSPUG00000010437) #11	TAB1 (ENSSPUG00000010450) #12	SYNGR1 (ENSSPUG00000010461) #13	RPL3 (ENSSPUG00000010477) #14	ENSSPUG00000010501	PDGFB (ENSSPUG00000010569) #15	CBX7 (ENSSPUG00000010589) #16	CBX6 (ENSSPUG00000010600) #20	NPTXR (ENSSPUG00000010609) #21	DNAL4 (ENSSPUG00000010628) #22	ENSSPUG00000010641	ENSSPUG00000010782 #23	GTPBP1 (ENSSPUG00000011073) #24	JOSD1 (ENSSPUG00000011096) #25	TOMM22 (ENSSPUG00000011101) #26	CBY1 (ENSSPUG00000011114) #27	DMC1 (ENSSPUG00000011125) #29	ENSSPUG00000011141	ENSSPUG00000011150	KDELR3 (ENSSPUG00000011162) #31	ENSSPUG00000011175	KCNJ4 (ENSSPUG00000011180) #32	CSNK1E (ENSSPUG00000011190) #33	TMEM184B (ENSSPUG00000011205) #34	MAFF (ENSSPUG00000011214) #35
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT01030000235747	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33
Cryptodira	ANCESTRAL SPECIES	10	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024.ab #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34
Emydidae	ANCESTRAL SPECIES	5	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024.ab #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34
Three-toed box turtle	MODERN SPECIES	118	FAM83F (ENSTMTG00000004780)	GRAP2 (ENSTMTG00000004819)	ENSTMTG00000004866	CACNA1I (ENSTMTG00000004892) #7	RPS19BP1 (ENSTMTG00000005007) #8	ATF4 (ENSTMTG00000005022) #9	MIEF1 (ENSTMTG00000005029) #10	MGAT3 (ENSTMTG00000005048) #11	TAB1 (ENSTMTG00000005068) #12	SYNGR1 (ENSTMTG00000005147) #13	RPL3 (ENSTMTG00000005162) #14	PDGFB (ENSTMTG00000005202) #15	CBX7 (ENSTMTG00000005237) #16	CBX6 (ENSTMTG00000005264) #20	NPTXR (ENSTMTG00000005287) #21	DNAL4 (ENSTMTG00000005323) #22	ENSTMTG00000005337	SUN2 (ENSTMTG00000005382) #23	GTPBP1 (ENSTMTG00000005394) #24	JOSD1 (ENSTMTG00000005417) #25	TOMM22 (ENSTMTG00000005428) #26	CBY1 (ENSTMTG00000005435) #27	ENSTMTG00000005452 #28	DMC1 (ENSTMTG00000005478) #29	ENSTMTG00000005506	KDELR3 (ENSTMTG00000005557) #31	ENSTMTG00000005576	KCNJ4 (ENSTMTG00000005596) #32	CSNK1E (ENSTMTG00000005612) #33	ENSTMTG00000005648	TMEM184B (ENSTMTG00000005674) #34
painted turtle	MODERN SPECIES	2381	CACNA1I (ENSCPBG00000022952) #7	ENSCPBG00000022958	ENSCPBG00000022961	RPS19BP1 (ENSCPBG00000022963) #8	ATF4 (ENSCPBG00000022964) #9	MIEF1 (ENSCPBG00000022966) #10	MGAT3 (ENSCPBG00000022968) #11	TAB1 (ENSCPBG00000022970) #12	SYNGR1 (ENSCPBG00000022974) #13	RPL3 (ENSCPBG00000022975) #14	PDGFB (ENSCPBG00000022980) #15	ENSCPBG00000022982	CBX7 (ENSCPBG00000022985) #16	CBX6 (ENSCPBG00000022986) #20	NPTXR (ENSCPBG00000022987) #21	DNAL4 (ENSCPBG00000022991) #22	ENSCPBG00000022995	ENSCPBG00000022997 #23	GTPBP1 (ENSCPBG00000022999) #24	JOSD1 (ENSCPBG00000023001) #25	TOMM22 (ENSCPBG00000023004) #26	CBY1 (ENSCPBG00000023007) #27	FAM227A (ENSCPBG00000023010) #28	DMC1 (ENSCPBG00000023014) #29	ENSCPBG00000023015	KDELR3 (ENSCPBG00000023016) #31	KCNJ4 (ENSCPBG00000023017) #32	ENSCPBG00000023018	ENSCPBG00000023020 #33	ENSCPBG00000023021	TMEM184B (ENSCPBG00000023022) #34
Testudinidae	ANCESTRAL SPECIES	14	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024.ab #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00910000147748	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34
Goode s thornscrub tortoise	MODERN SPECIES		GRAP2 (ENSGEVG00005001821)	ENSGEVG00005001812	CACNA1I (ENSGEVG00005001697) #7	RPS19BP1 (ENSGEVG00005001626) #8	ATF4 (ENSGEVG00005001614) #9	MIEF1 (ENSGEVG00005001595) #10	ENSGEVG00005001576	MGAT3 (ENSGEVG00005001561) #11	TAB1 (ENSGEVG00005001545) #12	SYNGR1 (ENSGEVG00005001533) #13	ENSGEVG00005001507 #14	PDGFB (ENSGEVG00005001493) #15	CBX7 (ENSGEVG00005001479) #16	CBX6 (ENSGEVG00005001468) #20	NPTXR (ENSGEVG00005001445) #21	DNAL4 (ENSGEVG00005001420) #22	ENSGEVG00005001394	SUN2 (ENSGEVG00005001358) #23	GTPBP1 (ENSGEVG00005001335) #24	JOSD1 (ENSGEVG00005001315) #25	TOMM22 (ENSGEVG00005001301) #26	CBY1 (ENSGEVG00005001284) #27	FAM227A (ENSGEVG00005001243) #28	DMC1 (ENSGEVG00005001174) #29	ENSGEVG00005001126	KDELR3 (ENSGEVG00005001110) #31	ENSGEVG00005001101	KCNJ4 (ENSGEVG00005001089) #32	CSNK1E (ENSGEVG00005001074) #33	TMEM184B (ENSGEVG00005001057) #34	MAFF (ENSGEVG00005001048) #35
Chinese turtle	MODERN SPECIES	760															NPTXR (ENSPSIG00000004360) #21	DNAL4 (ENSPSIG00000004356) #22	SUN2 (ENSPSIG00000004323) #23	GTPBP1 (ENSPSIG00000004300) #24	JOSD1 (ENSPSIG00000004291) #25	TOMM22 (ENSPSIG00000004282) #26	CBY1 (ENSPSIG00000004278) #27	FAM227A (ENSPSIG00000004210) #28	DMC1 (ENSPSIG00000004169) #29	ENSPSIG00000004118	KDELR3 (ENSPSIG00000004094) #31	ENSPSIG00000000739	KCNJ4 (ENSPSIG00000004055) #32	CSNK1E (ENSPSIG00000004050) #33	TMEM184B (ENSPSIG00000003990) #34	MAFF (ENSPSIG00000003974) #35	PLA2G6 (ENSPSIG00000003896) #36
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000161730	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00940000162433 #28	ENSGT00760000119398 #29	ENSGT00940000154705.B	ENSGT01030000235747	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33
Aves	ANCESTRAL SPECIES	1	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.y.a	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Neognathae	ANCESTRAL SPECIES	3	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.z	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.z	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Japanese quail	MODERN SPECIES		FAM83F (ENSCJPG00005010213)	GRAP2 (ENSCJPG00005010214)	CACNA1I (ENSCJPG00005010236) #7	RPS19BP1 (ENSCJPG00005013315) #8	ATF4 (ENSCJPG00005013316) #9	MIEF1 (ENSCJPG00005013317) #10	ENSCJPG00005013318	MGAT3 (ENSCJPG00005013319) #11	TAB1 (ENSCJPG00005013320) #12	SYNGR1 (ENSCJPG00005013322) #13	RPL3 (ENSCJPG00005013323) #14	PDGFB (ENSCJPG00005013325) #15	CBX7 (ENSCJPG00005013326) #16	CBX6 (ENSCJPG00005013327) #20	NPTXR (ENSCJPG00005013328) #21	DNAL4 (ENSCJPG00005013329) #22	ENSCJPG00005013330	SUN2 (ENSCJPG00005013331) #23	GTPBP1 (ENSCJPG00005013332) #24	JOSD1 (ENSCJPG00005013333) #25	TOMM22 (ENSCJPG00005013334) #26	CBY1 (ENSCJPG00005013335) #27	DMC1 (ENSCJPG00005013336) #29	DDX17 (ENSCJPG00005013338) #30	KDELR3 (ENSCJPG00005013339) #31	ENSCJPG00005013340	KCNJ4 (ENSCJPG00005013341) #32	CSNK1E (ENSCJPG00005013342) #33	TMEM184B (ENSCJPG00005013343) #34	MAFF (ENSCJPG00005013344) #35	PLA2G6 (ENSCJPG00005013345) #36
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.z	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Turkey	MODERN SPECIES		FAM83F (ENSMGAG00000012348)	GRAP2 (ENSMGAG00000012343)	CACNA1I (ENSMGAG00000012353) #7	RPS19BP1 (ENSMGAG00000012407) #8	ATF4 (ENSMGAG00000012387) #9	MIEF1 (ENSMGAG00000012384) #10	ENSMGAG00000021837	MGAT3 (ENSMGAG00000015927) #11	TAB1 (ENSMGAG00000012394) #12	SYNGR1 (ENSMGAG00000022115) #13	RPL3 (ENSMGAG00000012376) #14	PDGFB (ENSMGAG00000013497) #15	CBX7 (ENSMGAG00000016403) #16	CBX6 (ENSMGAG00000013491) #20	NPTXR (ENSMGAG00000020505) #21	DNAL4 (ENSMGAG00000013487) #22	ENSMGAG00000013486	ENSMGAG00000013484 #23	GTPBP1 (ENSMGAG00000012411) #24	JOSD1 (ENSMGAG00000012410) #25	TOMM22 (ENSMGAG00000012446) #26	CBY1 (ENSMGAG00000012444) #27	DMC1 (ENSMGAG00000012435) #29	DDX17 (ENSMGAG00000012423) #30	KDELR3 (ENSMGAG00000012417) #31	ENSMGAG00000020781	KCNJ4 (ENSMGAG00000012458) #32	CSNK1E (ENSMGAG00000012450) #33	TMEM184B (ENSMGAG00000012526) #34	MAFF (ENSMGAG00000015937) #35	PLA2G6 (ENSMGAG00000012447) #36
Chicken	MODERN SPECIES		TNRC6B (ENSGALG00010013146)	FAM83F (ENSGALG00010013164)	GRAP2 (ENSGALG00010013194)	CACNA1I (ENSGALG00010012410) #7	RPS19BP1 (ENSGALG00010012378) #8	ATF4 (ENSGALG00010012407) #9	MIEF1 (ENSGALG00010012426) #10	MGAT3 (ENSGALG00010012517) #11	TAB1 (ENSGALG00010012550) #12	SYNGR1 (ENSGALG00010012565) #13	RPL3 (ENSGALG00010012610) #14	PDGFB (ENSGALG00010012624) #15	CBX7 (ENSGALG00010012653) #16	ENSGALG00010012674 #21	NPTXR (ENSGALG00010012685) #21	DNAL4 (ENSGALG00010012696) #22	ENSGALG00010012723	SUN2 (ENSGALG00010015939) #23	GTPBP1 (ENSGALG00010012753) #24	JOSD1 (ENSGALG00010012767) #25	TOMM22 (ENSGALG00010012772) #26	CBY1 (ENSGALG00010012792) #27	DMC1 (ENSGALG00010012801) #29	DDX17 (ENSGALG00010012842) #30	KDELR3 (ENSGALG00010012876) #31	ENSGALG00010012882	KCNJ4 (ENSGALG00010012887) #32	CSNK1E (ENSGALG00010012911) #33	TMEM184B (ENSGALG00010012986) #34	MAFF (ENSGALG00010012998) #35	PLA2G6 (ENSGALG00010013015) #36
Anatidae	ANCESTRAL SPECIES	8	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT01000000215591	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00390000000560.z	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Pink-footed goose	MODERN SPECIES	58	FAM83F (ENSABRG00000016603)	GRAP2 (ENSABRG00000016616)	CACNA1I (ENSABRG00000016632) #7	RPS19BP1 (ENSABRG00000016643) #8	ATF4 (ENSABRG00000016646) #9	MIEF1 (ENSABRG00000016647) #10	MGAT3 (ENSABRG00000016649) #11	TAB1 (ENSABRG00000016651) #12	SYNGR1 (ENSABRG00000016652) #13	RPL3 (ENSABRG00000000816) #14	PDGFB (ENSABRG00000000955) #15	CBX7 (ENSABRG00000001005) #16	CBX6 (ENSABRG00000001054) #20	ENSABRG00000001062	NPTXR (ENSABRG00000001070) #21	DNAL4 (ENSABRG00000001086) #22	SUN2 (ENSABRG00000001118) #23	GTPBP1 (ENSABRG00000001213) #24	JOSD1 (ENSABRG00000001274) #25	TOMM22 (ENSABRG00000001299) #26	CBY1 (ENSABRG00000001496) #27	DMC1 (ENSABRG00000001527) #29	DDX17 (ENSABRG00000001584) #30	KDELR3 (ENSABRG00000001611) #31	ENSABRG00000001656	KCNJ4 (ENSABRG00000001669) #32	CSNK1E (ENSABRG00000001735) #33	TMEM184B (ENSABRG00000001749) #34	MAFF (ENSABRG00000001761) #35	PLA2G6 (ENSABRG00000001789) #36	BAIAP2L2 (ENSABRG00000001838) #37
Duck	MODERN SPECIES		TNRC6B (ENSAPLG00000009347)	FAM83F (ENSAPLG00000009665)	GRAP2 (ENSAPLG00000009697)	CACNA1I (ENSAPLG00000009947) #7	ENSAPLG00000017412	RPS19BP1 (ENSAPLG00000015585) #8	ATF4 (ENSAPLG00000001773) #9	MIEF1 (ENSAPLG00000015534) #10	TAB1 (ENSAPLG00000015131) #12	SYNGR1 (ENSAPLG00000028832) #13	ENSAPLG00000014599 #14	CBX7 (ENSAPLG00000023146) #16	CBX6 (ENSAPLG00000021019) #20	GTPBP1 (ENSAPLG00000014138) #24	NPTXR (ENSAPLG00000016553) #21	DNAL4 (ENSAPLG00000014021) #22	ENSAPLG00000014124	JOSD1 (ENSAPLG00000014238) #25	TOMM22 (ENSAPLG00000014275) #26	CBY1 (ENSAPLG00000014277) #27	DMC1 (ENSAPLG00000014309) #29	DDX17 (ENSAPLG00000014334) #30	KDELR3 (ENSAPLG00000014473) #31	KCNJ4 (ENSAPLG00000021499) #32	CSNK1E (ENSAPLG00000014660) #33	ENSAPLG00000019052	TMEM184B (ENSAPLG00000023479) #34	PLA2G6 (ENSAPLG00000014840) #36	ENSAPLG00000030608	ANKRD54 (ENSAPLG00000015350)	EIF3L (ENSAPLG00000015281)
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00940000155813	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00960000189605	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00940000155813	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00960000189605	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Great tit	MODERN SPECIES	10	TNRC6B (ENSPMJG00000007596)	FAM83F (ENSPMJG00000007663)	GRAP2 (ENSPMJG00000007667)	CACNA1I (ENSPMJG00000007671) #7	ATF4 (ENSPMJG00000007715) #9	ENSPMJG00000007720	MIEF1 (ENSPMJG00000007725) #10	MGAT3 (ENSPMJG00000007729) #11	TAB1 (ENSPMJG00000007731) #12	SYNGR1 (ENSPMJG00000007736) #13	RPL3 (ENSPMJG00000007738) #14	PDGFB (ENSPMJG00000007777) #15	CBX7 (ENSPMJG00000007778) #16	CBX6 (ENSPMJG00000007779) #20	NPTXR (ENSPMJG00000007780) #21	DNAL4 (ENSPMJG00000007781) #22	ENSPMJG00000007783	SUN2 (ENSPMJG00000007784) #23	GTPBP1 (ENSPMJG00000007785) #24	JOSD1 (ENSPMJG00000007786) #25	TOMM22 (ENSPMJG00000007787) #26	CBY1 (ENSPMJG00000007827) #27	DMC1 (ENSPMJG00000007829) #29	DDX17 (ENSPMJG00000007832) #30	KDELR3 (ENSPMJG00000007834) #31	KCNJ4 (ENSPMJG00000007835) #32	ENSPMJG00000007836	CSNK1E (ENSPMJG00000007874) #33	TMEM184B (ENSPMJG00000007876) #34	MAFF (ENSPMJG00000007878) #35	PLA2G6 (ENSPMJG00000007881) #36
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00940000155813	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT01030000234586.A.b #32	ENSGT00960000189605	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Flycatcher	MODERN SPECIES	10	ADSL (ENSFALG00000012164)	TNRC6B (ENSFALG00000012195)	FAM83F (ENSFALG00000012211)	GRAP2 (ENSFALG00000027504)	CACNA1I (ENSFALG00000012255) #7	ENSFALG00000025172	ATF4 (ENSFALG00000028026) #9	MIEF1 (ENSFALG00000026637) #10	MGAT3 (ENSFALG00000012338) #11	ENSFALG00000012365 #14	TAB1 (ENSFALG00000012344) #12	SYNGR1 (ENSFALG00000024193) #13	CBX7 (ENSFALG00000012385) #16	CBX6 (ENSFALG00000012402) #20	NPTXR (ENSFALG00000012405) #21	DNAL4 (ENSFALG00000012410) #22	ENSFALG00000012424	SUN2 (ENSFALG00000012447) #23	GTPBP1 (ENSFALG00000012474) #24	JOSD1 (ENSFALG00000028010) #25	CBY1 (ENSFALG00000012501) #27	DMC1 (ENSFALG00000012518) #29	DDX17 (ENSFALG00000012560) #30	KDELR3 (ENSFALG00000012578) #31	KCNJ4 (ENSFALG00000027144) #32	ENSFALG00000023486	CSNK1E (ENSFALG00000012594) #33	ENSFALG00000027181	TMEM184B (ENSFALG00000012608) #34	MAFF (ENSFALG00000012611) #35	PLA2G6 (ENSFALG00000012632) #36
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00940000155813	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00960000189605	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00940000155813	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00960000189605	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00910000147748	ENSGT00940000153861.b #34	ENSGT00940000161112 #35
Common canary	MODERN SPECIES	6	FAM83F (ENSSCAG00000005376)	GRAP2 (ENSSCAG00000005373)	CACNA1I (ENSSCAG00000005203) #7	ENSSCAG00000005162	ATF4 (ENSSCAG00000005159) #9	MIEF1 (ENSSCAG00000005154) #10	ENSSCAG00000005152	MGAT3 (ENSSCAG00000005149) #11	TAB1 (ENSSCAG00000005100) #12	SYNGR1 (ENSSCAG00000005082) #13	RPL3 (ENSSCAG00000005062) #14	PDGFB (ENSSCAG00000005044) #15	CBX7 (ENSSCAG00000005027) #16	CBX6 (ENSSCAG00000005021) #20	NPTXR (ENSSCAG00000005012) #21	DNAL4 (ENSSCAG00000005007) #22	ENSSCAG00000004994	SUN2 (ENSSCAG00000004979) #23	GTPBP1 (ENSSCAG00000004962) #24	JOSD1 (ENSSCAG00000004953) #25	TOMM22 (ENSSCAG00000004948) #26	CBY1 (ENSSCAG00000004944) #27	DMC1 (ENSSCAG00000004935) #29	DDX17 (ENSSCAG00000004466) #30	KDELR3 (ENSSCAG00000004407) #31	ENSSCAG00000004400	KCNJ4 (ENSSCAG00000004389) #32	ENSSCAG00000004386	CSNK1E (ENSSCAG00000004381) #33	TMEM184B (ENSSCAG00000004373) #34	MAFF (ENSSCAG00000004369) #35
Zebra finch	MODERN SPECIES	11	TNRC6B (ENSTGUG00000010138)	FAM83F (ENSTGUG00000010169)	GRAP2 (ENSTGUG00000024825)	CACNA1I (ENSTGUG00000010198) #7	RPS19BP1 (ENSTGUG00000010217) #8	ATF4 (ENSTGUG00000010225) #9	MIEF1 (ENSTGUG00000010229) #10	MGAT3 (ENSTGUG00000026743) #11	TAB1 (ENSTGUG00000010239) #12	SYNGR1 (ENSTGUG00000028441) #13	RPL3 (ENSTGUG00000010248) #14	PDGFB (ENSTGUG00000010265) #15	CBX7 (ENSTGUG00000019543) #16	CBX6 (ENSTGUG00000010274) #20	NPTXR (ENSTGUG00000024678) #21	DNAL4 (ENSTGUG00000022414) #22	ENSTGUG00000010288	SUN2 (ENSTGUG00000010300) #23	GTPBP1 (ENSTGUG00000010342) #24	JOSD1 (ENSTGUG00000010363) #25	TOMM22 (ENSTGUG00000019288) #26	CBY1 (ENSTGUG00000010375) #27	ENSTGUG00000010391	KDELR3 (ENSTGUG00000010407) #31	KCNJ4 (ENSTGUG00000023507) #32	CSNK1E (ENSTGUG00000010414) #33	ENSTGUG00000027116	TMEM184B (ENSTGUG00000010424) #34	MAFF (ENSTGUG00000023494) #35	PLA2G6 (ENSTGUG00000010433) #36	BAIAP2L2 (ENSTGUG00000010447) #37
Medium ground finch	MODERN SPECIES	37	TNRC6B (ENSGFOG00000005299)	FAM83F (ENSGFOG00000005221)	GRAP2 (ENSGFOG00000005145)	ENSGFOG00000005120 #7	RPS19BP1 (ENSGFOG00000005104) #8	ATF4 (ENSGFOG00000005102) #9	MIEF1 (ENSGFOG00000005100) #10	MGAT3 (ENSGFOG00000005097) #11	TAB1 (ENSGFOG00000005057) #12	SYNGR1 (ENSGFOG00000005016) #13	RPL3 (ENSGFOG00000004976) #14	PDGFB (ENSGFOG00000004960) #15	CBX7 (ENSGFOG00000004951) #16	CBX6 (ENSGFOG00000004935) #20	NPTXR (ENSGFOG00000004929) #21	DNAL4 (ENSGFOG00000004921) #22	ENSGFOG00000004895	SUN2 (ENSGFOG00000004875) #23	GTPBP1 (ENSGFOG00000004795) #24	JOSD1 (ENSGFOG00000004776) #25	TOMM22 (ENSGFOG00000004608) #26	CBY1 (ENSGFOG00000004598) #27	DMC1 (ENSGFOG00000011140) #29	ENSGFOG00000011084	KDELR3 (ENSGFOG00000011069) #31	KCNJ4 (ENSGFOG00000011066) #32	CSNK1E (ENSGFOG00000011058) #33	TMEM184B (ENSGFOG00000011043) #34	MAFF (ENSGFOG00000011039) #35	PLA2G6 (ENSGFOG00000009382) #36	BAIAP2L2 (ENSGFOG00000009290) #37
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000155813	ENSGT00940000160998	ENSGT00940000157307	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT00390000017606.a.a.j #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000156054 #24	ENSGT00390000009228.b #25	ENSGT00390000016475 #26	ENSGT00940000153137.a.a #27	ENSGT00760000119398 #29	ENSGT00940000160049 #30	ENSGT00390000004010.a.b.b #31	ENSGT00960000189605	ENSGT01030000234586.A.b #32	ENSGT00940000153536.a.a #33	ENSGT00940000153861.b #34	ENSGT00940000161112 #35	ENSGT00940000158756 #36
Golden eagle	MODERN SPECIES	8	FAM83F (ENSACCG00020011437)	ENSACCG00020011449	ENSACCG00020011462	CACNA1I (ENSACCG00020011911) #7	RPS19BP1 (ENSACCG00020012199) #8	ATF4 (ENSACCG00020012213) #9	MIEF1 (ENSACCG00020012241) #10	MGAT3 (ENSACCG00020012266) #11	TAB1 (ENSACCG00020012287) #12	SYNGR1 (ENSACCG00020012315) #13	RPL3 (ENSACCG00020012333) #14	PDGFB (ENSACCG00020012378) #15	CBX7 (ENSACCG00020012417) #16	CBX6 (ENSACCG00020012451) #20	NPTXR (ENSACCG00020012485) #21	DNAL4 (ENSACCG00020012504) #22	ENSACCG00020012527	SUN2 (ENSACCG00020012559) #23	GTPBP1 (ENSACCG00020005380) #24	JOSD1 (ENSACCG00020005399) #25	TOMM22 (ENSACCG00020005419) #26	CBY1 (ENSACCG00020005411) #27	DMC1 (ENSACCG00020005431) #29	DDX17 (ENSACCG00020005447) #30	KDELR3 (ENSACCG00020005472) #31	KCNJ4 (ENSACCG00020005497) #32	ENSACCG00020005502	CSNK1E (ENSACCG00020005518) #33	TMEM184B (ENSACCG00020005551) #34	MAFF (ENSACCG00020005576) #35	PLA2G6 (ENSACCG00020005601) #36
Kakapo	MODERN SPECIES	20	GRAP2 (ENSSHBG00005003082)	ENSSHBG00005003070	ENSSHBG00005003047	CACNA1I (ENSSHBG00005002245) #7	RPS19BP1 (ENSSHBG00005001898) #8	ATF4 (ENSSHBG00005001884) #9	MIEF1 (ENSSHBG00005001867) #10	MGAT3 (ENSSHBG00005001848) #11	TAB1 (ENSSHBG00005001824) #12	SYNGR1 (ENSSHBG00005001801) #13	RPL3 (ENSSHBG00005001758) #14	PDGFB (ENSSHBG00005001729) #15	CBX7 (ENSSHBG00005001693) #16	CBX6 (ENSSHBG00005001649) #20	NPTXR (ENSSHBG00005001611) #21	DNAL4 (ENSSHBG00005001571) #22	ENSSHBG00005001527	SUN2 (ENSSHBG00005001486) #23	GTPBP1 (ENSSHBG00005001433) #24	JOSD1 (ENSSHBG00005000670) #25	TOMM22 (ENSSHBG00005003470) #26	CBY1 (ENSSHBG00005003454) #27	DMC1 (ENSSHBG00005003436) #29	DDX17 (ENSSHBG00005003412) #30	KDELR3 (ENSSHBG00005003398) #31	ENSSHBG00005003387	ENSSHBG00005003377	KCNJ4 (ENSSHBG00005003366) #32	CSNK1E (ENSSHBG00005003348) #33	TMEM184B (ENSSHBG00005003315) #34	MAFF (ENSSHBG00005003294) #35
African ostrich	MODERN SPECIES	282	TNRC6B (ENSSCUG00000000852)	FAM83F (ENSSCUG00000000847)	GRAP2 (ENSSCUG00000000841)	CACNA1I (ENSSCUG00000000784) #7	RPS19BP1 (ENSSCUG00000000714) #8	ATF4 (ENSSCUG00000000713) #9	MIEF1 (ENSSCUG00000000711) #10	MGAT3 (ENSSCUG00000000710) #11	TAB1 (ENSSCUG00000000703) #12	SYNGR1 (ENSSCUG00000000692) #13	RPL3 (ENSSCUG00000000681) #14	PDGFB (ENSSCUG00000000671) #15	CBX7 (ENSSCUG00000000665) #16	CBX6 (ENSSCUG00000000660) #20	NPTXR (ENSSCUG00000000658) #21	DNAL4 (ENSSCUG00000000654) #22	ENSSCUG00000000651	SUN2 (ENSSCUG00000000629) #23	GTPBP1 (ENSSCUG00000000611) #24	JOSD1 (ENSSCUG00000000604) #25	TOMM22 (ENSSCUG00000000601) #26	CBY1 (ENSSCUG00000000600) #27	ENSSCUG00000000599	DMC1 (ENSSCUG00000000598) #29	ENSSCUG00000000595	KDELR3 (ENSSCUG00000000592) #31	ENSSCUG00000000591	KCNJ4 (ENSSCUG00000000588) #32	CSNK1E (ENSSCUG00000000587) #33	TMEM184B (ENSSCUG00000000582) #34	PLA2G6 (ENSSCUG00000000569) #36
Anura	ANCESTRAL SPECIES	20	ENSGT00940000158594 #7	ENSGT00390000016774 #8	ENSGT00530000063801.a #9	ENSGT00390000013127.a #10	ENSGT01030000234887	ENSGT00390000008221 #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c #13	ENSGT01100000264550	ENSGT00390000017606.a.a #14	ENSGT00940000157367 #15	ENSGT00940000158365 #16	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b	ENSGT00940000154405.a.b #21	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000160024 #23	ENSGT00940000160049 #30	ENSGT00760000119398 #29	ENSGT00940000153137.a.a #27	ENSGT00390000016475 #26	ENSGT00390000009228.b #25	ENSGT00940000156054 #24	ENSGT00940000154208.d	ENSGT00390000018518	ENSGT00940000154892	ENSGT00390000004383	ENSGT00390000000022.b	ENSGT00390000002918.a.b	ENSGT00730000111100
Leishan spiny toad	MODERN SPECIES	11	ENSLLEG00000022432	ENSLLEG00000022410	MGAT3 (ENSLLEG00000022183) #11	ENSLLEG00000022139	SYNGR1 (ENSLLEG00000022051) #13	TAB1 (ENSLLEG00000021739) #12	ENSLLEG00000021710	DHX8 (ENSLLEG00000021650)	RPL3 (ENSLLEG00000021252) #14	ENSLLEG00000021214	PDGFB (ENSLLEG00000021129) #15	ENSLLEG00000020901	ENSLLEG00000020852	CBX7 (ENSLLEG00000020675) #16	NPTXR (ENSLLEG00000020525) #21	DNAL4 (ENSLLEG00000020394) #22	ENSLLEG00000020229	SUN2 (ENSLLEG00000019751) #23	ENSLLEG00000019203	ENSLLEG00000018755	ENSLLEG00000027144	ENSLLEG00000027052	ENSLLEG00000027032	ENSLLEG00000027018	ENSLLEG00000026997	ENSLLEG00000026930	ENSLLEG00000026913	ENSLLEG00000026893	ENSLLEG00000026879	ENSLLEG00000026797	ENSLLEG00000026774
Frog	MODERN SPECIES	4	grap2 (ENSXETG00000016137)	cacna1i (ENSXETG00000016133) #7	ENSXETG00000047066	atf4 (ENSXETG00000024806) #9	rps19bp1 (ENSXETG00000037536) #8	mief1 (ENSXETG00000036965) #10	ENSXETG00000043521	mgat3 (ENSXETG00000016128) #11	tab1 (ENSXETG00000006916) #12	ENSXETG00000035744	rpl3 (ENSXETG00000006914) #14	pdgfb (ENSXETG00000006912) #15	cbx7 (ENSXETG00000040730) #16	cbx6 (ENSXETG00000048533) #20	nptxr (ENSXETG00000006906)	dnal4 (ENSXETG00000006905) #22	ENSXETG00000030996	sun2 (ENSXETG00000029959) #23	ddx17 (ENSXETG00000006900) #30	dmc1 (ENSXETG00000038374) #29	cby1 (ENSXETG00000006897) #27	tomm22 (ENSXETG00000006896) #26	josd1 (ENSXETG00000006895) #25	gtpbp1 (ENSXETG00000006894) #24	tob2 (ENSXETG00000046332)	phf5a (ENSXETG00000006893)	aco2 (ENSXETG00000006892)	polr3h (ENSXETG00000034216)	ENSXETG00000041968	wbp2nl (ENSXETG00000006890)	ENSXETG00000017472
Coelacanth	MODERN SPECIES	153																DNAL4 (ENSLACG00000000133) #22
Actinopterygii	ANCESTRAL SPECIES	340														ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000163663.A	ENSGT00920000149129	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37	ENSGT00940000159653	ENSGT00510000048561	ENSGT00510000048963
Neopterygii	ANCESTRAL SPECIES	166														ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00730000111100.a.a	ENSGT00940000163663.A	ENSGT00950000182979.a.a	ENSGT00920000149129	ENSGT00940000158756 #36	ENSGT00940000153560.b.b.b #37	ENSGT00940000159653	ENSGT00510000048561	ENSGT00510000048963	ENSGT00940000157367 #15	ENSGT00940000160024 #23	ENSGT01030000234578.A.b.b	ENSGT00950000183122.C	ENSGT00940000179237
Osteoglossocephalai	ANCESTRAL SPECIES	47	ENSGT01050000244893.c.a.b	ENSGT00870000136549	ENSGT00950000182935.B.b.c #13	ENSGT00510000048276 #12	ENSGT00390000008221.a #11	ENSGT00940000167614	ENSGT00940000179237	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b	ENSGT00940000160024 #23	ENSGT00940000157367.a.b #15	ENSGT00940000178227	ENSGT00940000153560.b.b.b.g #37	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265 #22	ENSGT00950000182951.A.a.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00730000111100.a.b	ENSGT00940000153239.B	ENSGT00390000009228.b #25	ENSGT00940000158365.f.a #16	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618
Osteoglossiformes	ANCESTRAL SPECIES	111	ENSGT00950000183045.A.b	ENSGT00940000155733.a.b.h	ENSGT00530000063801.a.a.b #9	ENSGT00940000178559	ENSGT00940000158652	ENSGT01030000234578.A.b.b.k	ENSGT00940000160024 #23	ENSGT00940000157367.a.b.h #15	ENSGT00940000178227	ENSGT00510000048561	ENSGT00940000159653.g.b.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265 #22	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.a	ENSGT00940000153239.B	ENSGT00940000158365.f.a #16	ENSGT00940000155497.a.a.l
P. kingsleyae	MODERN SPECIES	141	ENSPKIG00000004623 #8	ENSPKIG00000004609	ENSPKIG00000004576	atf4a (ENSPKIG00000004556) #9	ENSPKIG00000004545	ENSPKIG00000004471	ENSPKIG00000004421 #23	ENSPKIG00000004396 #15	ENSPKIG00000004365	ncf4 (ENSPKIG00000004332)	pvalb7 (ENSPKIG00000004294)	baiap2l2b (ENSPKIG00000004259) #37	pla2g6 (ENSPKIG00000004189) #36	CBX6 (ENSPKIG00000004143) #20	nptxrb (ENSPKIG00000004121)	dnal4b (ENSPKIG00000004101) #22	si:ch1073-357b18.4 (ENSPKIG00000004077)	mrtfab (ENSPKIG00000004053)	ENSPKIG00000004031	desi1a (ENSPKIG00000004018)	xrcc6 (ENSPKIG00000003974)	ENSPKIG00000003942 #16	EP300 (ENSPKIG00000003816)	xpnpep3 (ENSPKIG00000003746)	st13 (ENSPKIG00000003681)	ENSPKIG00000003639	l3mbtl2 (ENSPKIG00000003503)	chadlb (ENSPKIG00000003436)	rangap1b (ENSPKIG00000003343)	ENSPKIG00000003296	ZC3H7B (ENSPKIG00000003219)
Asian bonytongue	MODERN SPECIES	12	ENSSFOG00015027120	ENSSFOG00015023761	atf4a (ENSSFOG00015032012) #9	ENSSFOG00015023755	ENSSFOG00015023753	ENSSFOG00015023749	ENSSFOG00015023744 #23	ENSSFOG00015032503 #15	ENSSFOG00015023734	ncf4 (ENSSFOG00015004718)	pvalb6 (ENSSFOG00015026993)	pla2g6 (ENSSFOG00015004646) #36	ENSSFOG00015028604 #20	cbx6a (ENSSFOG00015032962) #20	nptxrb (ENSSFOG00015025949)	dnal4b (ENSSFOG00015004593) #22	mrtfab (ENSSFOG00015004553)	ENSSFOG00015004534	desi1a (ENSSFOG00015029550)	l3mbtl2 (ENSSFOG00015030235)	ENSSFOG00015014021	xrcc6 (ENSSFOG00015014409)	ENSSFOG00015030505 #16	EP300 (ENSSFOG00015014129)	st13 (ENSSFOG00015014040)	ENSSFOG00015024363	l3mbtl2 (ENSSFOG00015029446)	chadlb (ENSSFOG00015013966)	rangap1b (ENSSFOG00015013842)	tefa (ENSSFOG00015023219)	phf5a (ENSSFOG00015013765)
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	5	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b	ENSGT00940000160024 #23	ENSGT00940000157367.a.b #15	ENSGT00940000178227.b	ENSGT00940000157367.a.a #15	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g #37	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a #22	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000158365.f.b #16	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618	ENSGT00940000165277.b	ENSGT00440000039203.j	ENSGT00390000018542.a.b
Otomorpha	ANCESTRAL SPECIES	19								ENSGT00940000157367.a.b #15	ENSGT00940000178227.b	ENSGT00510000048561	ENSGT00940000159653.g.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a #22	ENSGT00940000166738	ENSGT00940000169047	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000158365.f.b #16	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618	ENSGT00940000165277.b	ENSGT00440000039203.j	ENSGT00390000018542.a.b
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES	71	ENSGT00580000081628	ENSGT01030000234642.a.a	ENSGT00390000015948.b	ENSGT00390000009265	ENSGT00940000156270	ENSGT00940000161451.a.a	ENSGT00940000160024 #23	ENSGT00940000157367.a.b #15	ENSGT00940000178227.b	ENSGT00510000048561	ENSGT00940000159653.g.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a.a #22	ENSGT00940000166738	ENSGT00940000169047.b	ENSGT00390000002210.c.a.m	ENSGT00940000155636.b.a	ENSGT00940000155636.a	ENSGT00940000175262	ENSGT00940000153463.b.b	ENSGT00940000171777	ENSGT00940000154317.b	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00390000005596.a	ENSGT00940000159169	ENSGT00530000063558.A.c.b	ENSGT00530000063503.a.a.a
Characiphysae	ANCESTRAL SPECIES	11	ENSGT00940000166856	ENSGT00940000154152.b.a	ENSGT00950000182892.a.b.a.b.b	ENSGT00390000004405.b	ENSGT00750000118756.b	ENSGT00940000154534.b.a	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b	ENSGT00940000157367.a.a #15	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g #37	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a.a #22	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT00940000174861	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b	ENSGT00940000157795.g.b	ENSGT00950000183191.a.a.f	ENSGT00940000164396	ENSGT00940000160506.b	ENSGT00940000159252.b.b	ENSGT00940000160492	ENSGT00950000183143.c.b
Characiphysae_b	ANCESTRAL SPECIES	30	ENSGT00940000154152.b.a	ENSGT00950000182892.a.b.a.b.b	ENSGT00390000004405.b	ENSGT00750000118756.b	ENSGT00940000154534.b.a	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b	ENSGT00940000157367.a.a #15	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g #37	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a.a #22	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT00940000174861	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b	ENSGT00940000157795.g.b	ENSGT00950000183191.a.a.f	ENSGT00940000164396	ENSGT00940000160506.b	ENSGT00940000159252.b.b	ENSGT00940000160492	ENSGT00950000183143.c.b
Characoidei	ANCESTRAL SPECIES	25	ENSGT00940000155029.c.b	ENSGT00940000166856	ENSGT00940000154152.b.a	ENSGT00950000182892.a.b.a.b.b	ENSGT00390000004405.b	ENSGT00750000118756.b	ENSGT00940000154534.b.a	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b	ENSGT00940000157367.a.a #15	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g #37	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a.a #22	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT00940000174861	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b	ENSGT00940000157795.g.b	ENSGT00950000183191.a.a.f	ENSGT00940000164396	ENSGT00940000160506.b	ENSGT00940000159252.b.b	ENSGT00940000160492	ENSGT00950000183143.c.b
Mexicana tetra	MODERN SPECIES	143	eve1 (ENSAMXG00000033002)	cbx1a (ENSAMXG00000037761)	nfe2l1a (ENSAMXG00000030680)	copz2 (ENSAMXG00000042171)	prr15la (ENSAMXG00000025774)	ENSAMXG00000035669	ENSAMXG00000002620	adsl (ENSAMXG00000041444)	tmem150b (ENSAMXG00000040509)	ENSAMXG00000041936 #15	ENSAMXG00000044079	pvalb6 (ENSAMXG00000040987)	ENSAMXG00000032398 #37	ENSAMXG00000031801 #20	ENSAMXG00000033964	dnal4a (ENSAMXG00000039111) #22	mvp (ENSAMXG00000039149)	ENSAMXG00000029031	ENSAMXG00000032552	ENSAMXG00000003448	ENSAMXG00000029620	ENSAMXG00000040820	nupr1b (ENSAMXG00000042734)	sgf29 (ENSAMXG00000003395)	nfatc2ip (ENSAMXG00000003379)	spns1 (ENSAMXG00000003359)	atxn2l (ENSAMXG00000003332)	sh2b1 (ENSAMXG00000003306)	pitpnbl (ENSAMXG00000003272)	ENSAMXG00000033294	cabp5b (ENSAMXG00000043720)
Red-bellied piranha	MODERN SPECIES	12	hoxb1a (ENSPNAG00000015431)	cbx1a (ENSPNAG00000015386)	nfe2l1a (ENSPNAG00000015355)	copz2 (ENSPNAG00000015344)	ENSPNAG00000015260	prr15la (ENSPNAG00000015234)	ENSPNAG00000007053	adsl (ENSPNAG00000015193)	tmem150b (ENSPNAG00000015100)	ENSPNAG00000015029 #15	ENSPNAG00000015012	pvalb6 (ENSPNAG00000014970)	ENSPNAG00000014949 #37	CBX6 (ENSPNAG00000014919) #20	ENSPNAG00000014911	dnal4a (ENSPNAG00000014898) #22	mvp (ENSPNAG00000004713)	ENSPNAG00000003259	ENSPNAG00000003251	ENSPNAG00000003243	ENSPNAG00000014709	DOC2A (ENSPNAG00000014692)	nupr1b (ENSPNAG00000014664)	sgf29 (ENSPNAG00000014651)	nfatc2ip (ENSPNAG00000014624)	spns1 (ENSPNAG00000003183)	atxn2l (ENSPNAG00000014538)	RUNDC3A (ENSPNAG00000003123)	ENSPNAG00000003106	ENSPNAG00000003101	ENSPNAG00000003099
Electric eel	MODERN SPECIES	26	hoxb2a (ENSEEEG00000003959)	hoxb1a (ENSEEEG00000003958)	cbx1a (ENSEEEG00000003957)	nfe2l1a (ENSEEEG00000003956)	copz2 (ENSEEEG00000003954)	prr15la (ENSEEEG00000003950)	ENSEEEG00000003947	ENSEEEG00000003946	adsl (ENSEEEG00000003851)	tmem150b (ENSEEEG00000003830)	ENSEEEG00000003824 #15	csf2rb (ENSEEEG00000003819)	pvalb6 (ENSEEEG00000003816)	CBX6 (ENSEEEG00000003814) #20	ENSEEEG00000003812	dnal4a (ENSEEEG00000003810) #22	ENSEEEG00000003807	mvp (ENSEEEG00000002941)	ENSEEEG00000002879	ENSEEEG00000002878	ENSEEEG00000002876	ENSEEEG00000002875	nupr1b (ENSEEEG00000002874)	sgf29 (ENSEEEG00000002871)	nfatc2ip (ENSEEEG00000002869)	spns1 (ENSEEEG00000002863)	atxn2l (ENSEEEG00000002857)	sh2b1 (ENSEEEG00000002856)	pitpnbl (ENSEEEG00000002853)	ENSEEEG00000002850	SEZ6L2 (ENSEEEG00000002847)
Channel catfish	MODERN SPECIES	11	hoxb2 (ENSIPUG00000002425)	hoxb1a (ENSIPUG00000002421)	cbx1a (ENSIPUG00000002405)	nfe2l1a (ENSIPUG00000002401)	COPZ1 (ENSIPUG00000002355)	prr15la (ENSIPUG00000002338)	ENSIPUG00000002327	ADSL (ENSIPUG00000002270)	tmem150b (ENSIPUG00000002228)	PDGFB (ENSIPUG00000002192) #15	ENSIPUG00000002159	pvalb7 (ENSIPUG00000002145)	ENSIPUG00000002119 #37	ENSIPUG00000002113	ENSIPUG00000002107	dnal4a (ENSIPUG00000002099) #22	mvp (ENSIPUG00000002045)	ENSIPUG00000002035	ENSIPUG00000002029	ENSIPUG00000001968	ENSIPUG00000001963	DOC2A (ENSIPUG00000001924)	nupr1 (ENSIPUG00000001913)	sgf29 (ENSIPUG00000001851)	nfatc2ip (ENSIPUG00000001830)	spns1 (ENSIPUG00000001804)	atxn2l (ENSIPUG00000001761)	sh2b1 (ENSIPUG00000001741)	ENSIPUG00000001726	pitpnbl (ENSIPUG00000001633)	cabp5b (ENSIPUG00000001604)
Cyprinoidei	ANCESTRAL SPECIES	17	ENSGT00940000159529	ENSGT00580000081628	ENSGT01030000234642.a.a	ENSGT00390000015948.b	ENSGT00390000009265	ENSGT00940000156270	ENSGT00940000161451.a.a	ENSGT00940000157367.a.b #15	ENSGT00940000178227.b	ENSGT00510000048561	ENSGT00940000159653.g.b	ENSGT00940000153560.b.b.b.h.a #37	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a.a #22	ENSGT00940000166738	ENSGT00940000169047.b	ENSGT00940000163472.i.a.a	ENSGT01100000263483.F.b.a.b	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00940000169105	ENSGT00940000158272.c.a	ENSGT00940000171777	ENSGT00940000154317.b	ENSGT00390000005596.a	ENSGT00940000159169.z	ENSGT00940000159169.y	ENSGT00530000063558.A.c.b	ENSGT00530000063503.a.a.a
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000161265.e.a.a.a.a #22
Cyprininae_a	ANCESTRAL SPECIES	12	ENSGT00940000154152.b.a.c	ENSGT00950000182892.a.b.a.b.b.a	ENSGT00390000004405.b.a	ENSGT00750000118756.b	ENSGT00940000154534.b.a.d	ENSGT00530000063801.a.b.b #9	ENSGT00940000166816.f	ENSGT00950000183122.C.k.a	ENSGT01030000234578.A.b.b.i	ENSGT00940000157367.a.a.b #15	ENSGT00940000178227.a	ENSGT00940000159653.g.a.b	ENSGT00940000153560.b.b.b.g.d #37	ENSGT00940000154405.a.a.r.b #20	ENSGT01060000248591.a.a.a.b.a.a	ENSGT00940000161265.e.a.a.a.a #22	ENSGT00940000155124	ENSGT00940000166738.d	ENSGT01060000249904.c.a	ENSGT01060000249904.c.b	ENSGT00940000169047.b.b.a.b	ENSGT00940000169047.b.a.a	ENSGT00940000163472.i.a.a.e	ENSGT00920000149129.k	ENSGT01100000263483.F.b.a.b.b.a	ENSGT00950000182979.a.a.a.a.i	ENSGT00940000163663.A.a.d	ENSGT00730000111100.a.a.b	ENSGT00940000158365.f.b.g #16	ENSGT00940000155497.a.a.b	ENSGT00940000153657.A.j
Golden-line barbel	MODERN SPECIES	65	hoxb2a (ENSSGRG00000046989)	hoxb1a (ENSSGRG00000046988)	cbx1a (ENSSGRG00000046987)	copz2 (ENSSGRG00000046971)	prr15la (ENSSGRG00000046968)	atf4b (ENSSGRG00000046967) #9	ENSSGRG00000046966	adsl (ENSSGRG00000046932)	tmem150b (ENSSGRG00000046929)	ENSSGRG00000046927 #15	csf2rb (ENSSGRG00000046925)	pvalb6 (ENSSGRG00000046924)	ENSSGRG00000046922 #37	CBX6 (ENSSGRG00000046921) #20	ENSSGRG00000046920	dnal4a (ENSSGRG00000046919) #22	ENSSGRG00000046918	ENSSGRG00000046917	ENSSGRG00000046916	ENSSGRG00000046914	zgc:171506 (ENSSGRG00000046913)
Goldfish	MODERN SPECIES	22	ENSCARG00000001551	zgc:123295 (ENSCARG00000001546)	ENSCARG00000001527	cdipt (ENSCARG00000001517)	ENSCARG00000001514	nlk1 (ENSCARG00000001510)	adsl (ENSCARG00000001305)	tmem150b (ENSCARG00000001244)	ENSCARG00000001238	ENSCARG00000001233 #15	csf2rb (ENSCARG00000001229)	pvalb6 (ENSCARG00000001222)	CBX6 (ENSCARG00000001216) #20	ENSCARG00000001209 #37	ENSCARG00000001205	dnal4a (ENSCARG00000001203) #22	ENSCARG00000001196	sp100.4 (ENSCARG00000001193)	ENSCARG00000001190	ENSCARG00000001187	ENSCARG00000001175	MCHR1 (ENSCARG00000001171)	grb2b (ENSCARG00000001169)	BPTF (ENSCARG00000001062)	kpna2 (ENSCARG00000000964)	smurf2 (ENSCARG00000000493)	ddx5 (ENSCARG00000000338)	mgat3a (ENSCARG00000000313) #11	ENSCARG00000000304	il2rb (ENSCARG00000000295)	ENSCARG00000000284
Cyprininae	ANCESTRAL SPECIES	24					ENSGT00530000063801.a.b.b #9	ENSGT00940000166816.f	ENSGT00950000183122.C.k.a	ENSGT01030000234578.A.b.b.i	ENSGT00940000157367.a.a.b #15	ENSGT00940000178227.a	ENSGT00510000049239.b.a.b	ENSGT00940000159653.g.a.b	ENSGT00940000153560.b.b.b.g.d #37	ENSGT00940000154405.a.a.r.b #20	ENSGT01060000248591.a.a.a.b.a.a	ENSGT00940000161265.e.a.a.a.b #22	ENSGT00940000155124	ENSGT00940000166738.d	ENSGT01060000249904.c.a	ENSGT01060000249904.c.b	ENSGT00940000169047.b.b.a.b	ENSGT00940000169047.b.a.a	ENSGT00940000163472.i.a.a.e	ENSGT00920000149129.k	ENSGT01100000263483.F.b.a.b.b.a	ENSGT00950000182979.a.a.a.a.i	ENSGT00940000163663.A.a.d	ENSGT00730000111100.a.a.b	ENSGT00940000158365.f.b.g #16	ENSGT00940000155497.a.a.b	ENSGT00940000153657.A.j
Goldfish	MODERN SPECIES	20	hoxb1a (ENSCARG00000028172)	cbx1a (ENSCARG00000019197)	nfe2l1a (ENSCARG00000019208)	copz2 (ENSCARG00000019212)	prr15la (ENSCARG00000019228)	atf4b (ENSCARG00000019233) #9	ENSCARG00000019239	adsl (ENSCARG00000019303)	tmem150b (ENSCARG00000020774)	ENSCARG00000020800 #15	csf2rb (ENSCARG00000020815)	pvalb6 (ENSCARG00000020823)	ENSCARG00000020833 #37	CBX6 (ENSCARG00000020839) #20	ENSCARG00000020843	dnal4a (ENSCARG00000020846) #22	ENSCARG00000020861	ENSCARG00000020914	ENSCARG00000020919	ENSCARG00000020921	ENSCARG00000020934	ENSCARG00000020937	nuggc.3 (ENSCARG00000020949)	ENSCARG00000020961	ENSCARG00000020966	ENSCARG00000020969	ENSCARG00000020974	fasn2 (ENSCARG00000020978)	PTCHD3 (ENSCARG00000020985)	si:ch211-165i18.2 (ENSCARG00000020987)	ENSCARG00000021007
Cyprininae_a	ANCESTRAL SPECIES	93										ENSGT00510000049239.b.a.a.a	ENSGT00940000159653.g.a.a	ENSGT00940000153560.b.b.b.g.c #37	ENSGT00940000154405.a.a.r.a #20	ENSGT01040000240385.A.b.b.b.a.a.b.a.b.a.b.a.b	ENSGT01060000248591.a.a.a.b.a.b	ENSGT00940000161265.e.a.a.a.b #22	ENSGT00940000169047.b.b.a.a	ENSGT00940000163472.i.a.a.f	ENSGT01100000263483.F.b.a.b.b.b	ENSGT01100000263483.F.b.a.b.a	ENSGT00920000149129.l	ENSGT00950000182979.a.a.a.a.j	ENSGT00940000163663.A.a.c	ENSGT00730000111100.a.a.a	ENSGT00940000158365.f.b.h #16	ENSGT00940000155497.a.a.a	ENSGT00940000153657.A.i	ENSGT00390000001347.d	ENSGT00940000155618	ENSGT00940000165277.b	ENSGT00940000155733.a.b.b.a.a
Golden-line barbel	MODERN SPECIES	323											pvalb6 (ENSSGRG00000053635)	ENSSGRG00000053636 #37	ENSSGRG00000053637 #20	ENSSGRG00000053638	ENSSGRG00000053639	dnal4a (ENSSGRG00000053640) #22	ENSSGRG00000053641	sp100.4 (ENSSGRG00000053644)	sp100.4 (ENSSGRG00000053647)	ENSSGRG00000053648	ENSSGRG00000053649	ENSSGRG00000053650	slc25a17 (ENSSGRG00000053651)	ENSSGRG00000053652	ENSSGRG00000053655	desi1a (ENSSGRG00000053656)	cbx7a (ENSSGRG00000053657) #16	EP300 (ENSSGRG00000053660)	xpnpep3 (ENSSGRG00000053662)	st13 (ENSSGRG00000053663)	rbx1 (ENSSGRG00000053733)
Cyprininae	ANCESTRAL SPECIES	799											ENSGT00510000049239.b.a.a.a	ENSGT00940000159653.g.a.a	ENSGT00940000153560.b.b.b.g.c #37	ENSGT00940000154405.a.a.r.a #20	ENSGT01060000248591.a.a.a.b.a.b	ENSGT00940000161265.e.a.a.b #22	ENSGT00940000166738.c	ENSGT00940000169047.b.b.a.a	ENSGT00940000163472.i.a.a.f
Cyprininae_a	ANCESTRAL SPECIES	1298																ENSGT00940000161265.e.a.a.b #22	ENSGT00940000166738.c
Common carp reference	MODERN SPECIES	3	copz2 (ENSCCRG00000023103)	prr15la (ENSCCRG00000072432)	atf4b (ENSCCRG00000038852) #9	ENSCCRG00000038834	tmem150b (ENSCCRG00000028470)	ENSCCRG00000064343	ENSCCRG00000055397 #15	csf2rb (ENSCCRG00000038862)	ENSCCRG00000078838	csf2rb (ENSCCRG00000024018)	pvalb6 (ENSCCRG00000012986)	ENSCCRG00000063554 #37	ENSCCRG00000037000 #20	ENSCCRG00000000363	ENSCCRG00000000373	dnal4a (ENSCCRG00000052443) #22	ENSCCRG00000014127	ENSCCRG00000055939	ENSCCRG00000054498	sp100.4 (ENSCCRG00000048414)	sp100.4 (ENSCCRG00000014770)	ENSCCRG00000014780	ENSCCRG00000069149	slc25a17 (ENSCCRG00000014784)	ENSCCRG00000080080	ENSCCRG00000080490	desi1a (ENSCCRG00000058164)	cbx7a (ENSCCRG00000013587) #16	ENSCCRG00000013652	xpnpep3 (ENSCCRG00000010308)	st13 (ENSCCRG00000026570)
Zebrafish	MODERN SPECIES	18	cbx1a (ENSDARG00000004189)	nfe2l1a (ENSDARG00000030616)	copz2 (ENSDARG00000006786)	ENSDARG00000097637	prr15la (ENSDARG00000025615)	atf4b (ENSDARG00000038141) #9	ENSDARG00000074773	adsl (ENSDARG00000017049)	tmem150b (ENSDARG00000056144)	ENSDARG00000038139 #15	pvalb6 (ENSDARG00000009311)	csf2rb (ENSDARG00000076586)	ENSDARG00000016483 #37	CBX6 (ENSDARG00000097543) #20	ENSDARG00000040430	dnal4a (ENSDARG00000031116) #22	ENSDARG00000055359	ENSDARG00000102588	ENSDARG00000090449	ENSDARG00000099247	ENSDARG00000104350	zgc:171506 (ENSDARG00000078206)	ENSDARG00000104144	sp100.4 (ENSDARG00000038133)	ENSDARG00000087575	ENSDARG00000099678	slc25a17 (ENSDARG00000061684)	ENSDARG00000075867	ENSDARG00000105972	desi1a (ENSDARG00000033140)	cbx7a (ENSDARG00000038025) #16
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000161265.e.a.b #22
Cyprinoidei	ANCESTRAL SPECIES	17	ENSGT00950000182993.B.b	ENSGT00530000063615.b.n	ENSGT00530000063615.b.m	ENSGT00940000154063.C.a.b.k	ENSGT00940000176087	ENSGT00940000154063.C.a.b.l	ENSGT00940000159039.b	ENSGT00940000155280.e	ENSGT00940000159318.n.b	ENSGT00940000158246	ENSGT00940000158015.k.b	ENSGT00390000001146	ENSGT00390000000549	ENSGT00390000009679	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.e.a.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00990000204053	ENSGT00530000064273.a.b.p	ENSGT00530000064273.a.b.o.g	ENSGT00390000007688.a.a	ENSGT00940000163785.b	ENSGT01050000244941.B.d	ENSGT00950000183036.a.b	ENSGT00940000165672	ENSGT00940000155561.n.a	ENSGT00940000159593	ENSGT00940000155387.d	ENSGT00390000011058.b	ENSGT00990000204968	ENSGT00940000166731.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	289	ENSGT00940000154063.C.a.b.k.b	ENSGT00940000159039.b.c.b	ENSGT00940000176087	ENSGT00940000154063.C.a.b.l	ENSGT00940000159039.b.c.a.b	ENSGT00940000155280.e.c	ENSGT00940000159318.n.b.b	ENSGT00940000164876.b.e.b	ENSGT00940000164876.b.f.b.b	ENSGT00940000158246.c.a	ENSGT00940000158015.k.b.d	ENSGT00390000001146.b	ENSGT00390000000549	ENSGT00390000009679	ENSGT01060000248591.a.a.a.b.b.b	ENSGT00940000161265.e.a.b.a #22
Cyprininae_a	ANCESTRAL SPECIES	40	ENSGT00940000159016.k	ENSGT00950000182993.B.b.m	ENSGT00530000063615.b.n.a	ENSGT00940000154063.C.a.b.k.a	ENSGT00940000159039.b.d	ENSGT00940000155280.e.d	ENSGT00940000159318.n.b.a	ENSGT00940000164876.b.f.b.a	ENSGT00940000164876.b.f.a.a	ENSGT00940000158246.c.b	ENSGT00940000158015.k.b.c	ENSGT00390000001146.a	ENSGT00390000000549	ENSGT00390000009679.s	ENSGT01060000248591.a.a.a.b.b.b	ENSGT00940000161265.e.a.b.a #22	ENSGT01010000222294.c.b.b.b.d.b.a.f	ENSGT00530000064273.a.b.p.a	ENSGT00530000064273.a.b.o.g.a	ENSGT00390000007688.a.a.i	ENSGT00940000163785.b.b	ENSGT01050000244941.B.d.i	ENSGT00950000183036.a.b.f	ENSGT00940000165672.t	ENSGT00940000165672.s	ENSGT00940000155561.n.a.b	ENSGT00940000159593.b	ENSGT00940000155387.d.a	ENSGT00390000011058.b.g	ENSGT00990000204968.b	ENSGT00940000166731.a.b
Common carp reference	MODERN SPECIES	43	ENSCCRG00000080947	yju2b (ENSCCRG00000031711)	ENSCCRG00000034487	ENSCCRG00000034508	ENSCCRG00000072353	vasna (ENSCCRG00000075566)	ENSCCRG00000038941	ENSCCRG00000009229	ENSCCRG00000077300	ENSCCRG00000009238	rrbp1b (ENSCCRG00000009312)	kat14 (ENSCCRG00000080002)	dzank1 (ENSCCRG00000009448)	polr3f (ENSCCRG00000009452)	nptxrb (ENSCCRG00000009461)	dnal4b (ENSCCRG00000067771) #22	ENSCCRG00000026817	ENSCCRG00000002880	ENSCCRG00000055431	ENSCCRG00000011422	ENSCCRG00000008500	ENSCCRG00000008473	ENSCCRG00000008468	mcoln2 (ENSCCRG00000033961)	ENSCCRG00000045916	ENSCCRG00000006491	ENSCCRG00000006474	wdr47b (ENSCCRG00000006482)	ENSCCRG00000072397	ENSCCRG00000028943	ENSCCRG00000035416
Golden-line barbel	MODERN SPECIES	876	ENSSGRG00000024411	ENSSGRG00000024410	ENSSGRG00000024405	ENSSGRG00000024399	ENSSGRG00000024397	ENSSGRG00000024393	ENSSGRG00000024390	ENSSGRG00000024387	ENSSGRG00000024385	ENSSGRG00000024383	ENSSGRG00000024381	kat14 (ENSSGRG00000024273)	dzank1 (ENSSGRG00000024272)	polr3f (ENSSGRG00000024182)	nptxrb (ENSSGRG00000024175)	dnal4b (ENSSGRG00000024174) #22	ENSSGRG00000024171	ENSSGRG00000024168	ENSSGRG00000024164	ENSSGRG00000022519	ENSSGRG00000022469	ENSSGRG00000020546	SSX2IP (ENSSGRG00000020458)	ENSSGRG00000020451	lpar3 (ENSSGRG00000020449)	mcoln2 (ENSSGRG00000020447)
Goldfish	MODERN SPECIES	41	sde2 (ENSCARG00000029526)	wdr83 (ENSCARG00000029502)	ENSCARG00000029496	yju2b (ENSCARG00000029465)	ENSCARG00000029323	PDGFA (ENSCARG00000029294)	ENSCARG00000029253	ENSCARG00000029241	vasna (ENSCARG00000029237)	ENSCARG00000029234	ENSCARG00000029224	rrbp1b (ENSCARG00000028692)	kat14 (ENSCARG00000028646)	polr3f (ENSCARG00000028635)	nptxrb (ENSCARG00000028622)	dnal4b (ENSCARG00000028612) #22	ENSCARG00000028606	ENSCARG00000028566	dag1 (ENSCARG00000028529)	pcbp4 (ENSCARG00000028522)	rbm15b (ENSCARG00000028510)	manf (ENSCARG00000028501)	DOCK3 (ENSCARG00000027406)	ENSCARG00000027194	ENSCARG00000027185	ENSCARG00000027173	ENSCARG00000027160	ENSCARG00000027144	wu:fu71h07 (ENSCARG00000027131)	ENSCARG00000058948	LSM3 (ENSCARG00000058919)
Cyprininae	ANCESTRAL SPECIES	113															ENSGT01060000248591.a.a.a.b.b.a	ENSGT00940000161265.e.a.b.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00990000204053	ENSGT00940000175306	ENSGT00530000064273.a.b.o.h	ENSGT00530000064273.a.b.o.g.b	ENSGT00390000007688.a.a.j	ENSGT00940000163785.b.a	ENSGT01050000244941.B.d.j	ENSGT00950000183036.a.b	ENSGT00940000165672.t	ENSGT00940000165672.s	ENSGT00940000155561.n.a.b	ENSGT00940000159593.b	ENSGT00940000155387.d.a	ENSGT00390000011058.b.g
Goldfish	MODERN SPECIES	14	sde2 (ENSCARG00000015627)	PSPN (ENSCARG00000015623)	ENSCARG00000015609	ENSCARG00000015597	PDGFA (ENSCARG00000015589)	dnaja3b (ENSCARG00000015037)	vasna (ENSCARG00000015016)	ENSCARG00000015005	ENSCARG00000015001	ENSCARG00000014996	AARS2 (ENSCARG00000014934)	rrbp1b (ENSCARG00000014805)	kat14 (ENSCARG00000014667)	dzank1 (ENSCARG00000014647)	nptxrb (ENSCARG00000014637)	dnal4b (ENSCARG00000014630) #22	ENSCARG00000014593	ENSCARG00000014590	ENSCARG00000014567	ENSCARG00000011909	ENSCARG00000009713	ENSCARG00000008395	ENSCARG00000005663	SSX2IP (ENSCARG00000003935)	ENSCARG00000003854	lpar3 (ENSCARG00000003807)	mcoln2 (ENSCARG00000032174)	wdr47b (ENSCARG00000032135)	P3H2 (ENSCARG00000031954)	ENSCARG00000031939	ENSCARG00000031927
Cyprininae_a	ANCESTRAL SPECIES	164	ENSGT00530000063615.b.m	ENSGT00940000154063.C.a.b.k.b	ENSGT00940000159039.b.c.b	ENSGT00940000176087	ENSGT00940000154063.C.a.b.l	ENSGT00940000159039.b.c.a.a	ENSGT00940000155280.e.c	ENSGT00940000159318.n.b.b	ENSGT00940000164876.b.e.a.a.a	ENSGT00940000164876.b.f.b.b	ENSGT00940000158246.c.a	ENSGT00940000158015.k.b.d	ENSGT00390000001146.b	ENSGT00390000009679.t	ENSGT01060000248591.a.a.a.b.b.a	ENSGT00940000161265.e.a.b.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00990000204053
Golden-line barbel	MODERN SPECIES	1444									ENSSGRG00000034862	rrbp1b (ENSSGRG00000034763)	kat14 (ENSSGRG00000034487)	ENSSGRG00000034476	ENSSGRG00000034474	dzank1 (ENSSGRG00000034473)	nptxrb (ENSSGRG00000034472)	dnal4b (ENSSGRG00000034470) #22	ENSSGRG00000034469	ENSSGRG00000033897	ENSSGRG00000033887	ENSSGRG00000033151	ENSSGRG00000033139
Common carp reference	MODERN SPECIES	5	sde2 (ENSCCRG00000031727)	ENSCCRG00000069003	ENSCCRG00000034478	ENSCCRG00000055304	ENSCCRG00000074802	ENSCCRG00000053174	dnaja3b (ENSCCRG00000009119)	vasna (ENSCCRG00000038943)	ENSCCRG00000009218	ENSCCRG00000069754	ENSCCRG00000062596	rrbp1b (ENSCCRG00000030656)	kat14 (ENSCCRG00000009365)	polr3f (ENSCCRG00000009484)	nptxrb (ENSCCRG00000061315)	dnal4b (ENSCCRG00000078277) #22	ENSCCRG00000009489	ENSCCRG00000068246	ENSCCRG00000061688	ENSCCRG00000009933	ENSCCRG00000056642	ENSCCRG00000010199	ENSCCRG00000025114	ENSCCRG00000029536	ENSCCRG00000017423	mcoln2 (ENSCCRG00000045590)	ENSCCRG00000012435	wdr47b (ENSCCRG00000012451)	ENSCCRG00000006035	ENSCCRG00000037312	ENSCCRG00000037315
Zebrafish	MODERN SPECIES	14	zgc:171717 (ENSDARG00000087583)	ENSDARG00000086408	ENSDARG00000110966	si:ch211-226h8.11 (ENSDARG00000093249)	ENSDARG00000094199	zgc:172218 (ENSDARG00000089869)	ENSDARG00000077097	si:ch211-226h8.4 (ENSDARG00000086221)	ENSDARG00000092702	rrbp1b (ENSDARG00000041703)	kat14 (ENSDARG00000041708)	dzank1 (ENSDARG00000055787)	polr3f (ENSDARG00000012572)	nptxrb (ENSDARG00000053375)	si:dkey-179j5.5 (ENSDARG00000074538)	dnal4b (ENSDARG00000088841) #22	ENSDARG00000060325	ENSDARG00000112021	ENSDARG00000115038	ENSDARG00000092028	vtg2 (ENSDARG00000055809)	vtg7 (ENSDARG00000092419)	vtg6 (ENSDARG00000016825)	vtg4 (ENSDARG00000078429)	ENSDARG00000092779	vtg5 (ENSDARG00000092126)	vtg1 (ENSDARG00000092233)	ENSDARG00000111503	SSX2IP (ENSDARG00000061602)	ENSDARG00000093164	lpar3 (ENSDARG00000101814)
Clupeiformes	ANCESTRAL SPECIES	29	ENSGT00550000075088.a.b.b	ENSGT00510000046773.a.b.c.a	ENSGT00950000183045.A.b	ENSGT00390000013127.a #10	ENSGT00940000155733.a.b	ENSGT00530000063801.a.b #9	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b	ENSGT00940000157367.a.a #15	ENSGT00510000048963	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g #37	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a #22
Atlantic herring	MODERN SPECIES	15	ENSCHAG00000007157	ENSCHAG00000007175	MED1 (ENSCHAG00000007223)	MED1 (ENSCHAG00000008072)	neurod2 (ENSCHAG00000008120)	SAMD14 (ENSCHAG00000008131)	ENSCHAG00000008139	psmd3 (ENSCHAG00000008169)	ENSCHAG00000008854	ENSCHAG00000008888 #15	ENSCHAG00000008906	pvalb6 (ENSCHAG00000008932)	ENSCHAG00000008959 #37	CBX6 (ENSCHAG00000008979) #20	ENSCHAG00000009002	dnal4b (ENSCHAG00000009097) #22	ENSCHAG00000009108	ENSCHAG00000009118	ENSCHAG00000009162	ENSCHAG00000009241	ENSCHAG00000009276	ENSCHAG00000009290	ENSCHAG00000009310	ENSCHAG00000009330	ENSCHAG00000009366	ENSCHAG00000009382	erbb2 (ENSCHAG00000009403)	dcaf7 (ENSCHAG00000009842)	ENSCHAG00000009885	ENSCHAG00000009893	pth3r (ENSCHAG00000009902)
Euteleosteomorpha	ANCESTRAL SPECIES		ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a #10	ENSGT00940000155733.a.b	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b #9	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b	ENSGT00940000157367.a.a #15	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g #37	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a #22	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000158365.f.b #16	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618	ENSGT00940000165277.b	ENSGT00440000039203.j	ENSGT00390000018542.a.b
Protacanthopterygii	ANCESTRAL SPECIES	5	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b #9	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b.h	ENSGT01030000234578.A.b.b.g	ENSGT00940000157367.a.a #15	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g #37	ENSGT00940000166105	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727	ENSGT00940000155124	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a #22	ENSGT00940000166738	ENSGT00920000149129	ENSGT00940000164868.B	ENSGT01100000263491.a.b.a.a.a.a.a.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b	ENSGT00550000075110	ENSGT01030000234558.D.b.g.b	ENSGT00950000183110.a	ENSGT00940000157774	ENSGT00390000007919	ENSGT00550000075064	ENSGT00390000011347	ENSGT00940000165175.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000156233
Salmoninae	ANCESTRAL SPECIES	428	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT01030000234887	ENSGT00390000013127.a.y #10	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c #9	ENSGT00940000167870	ENSGT01040000241311	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b	ENSGT00940000157367.a.a.e #15	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a #37	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00940000161265.e.a #22	ENSGT00950000182951.A.a.b.b
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	122	ENSGT00510000049239.a.c.d	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT01030000234887	ENSGT00390000013127.a.y #10	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c #9	ENSGT00940000166816.a	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b	ENSGT00940000157367.a.a.e #15	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a #37	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00940000161265.e.a.c #22	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727.g	ENSGT00940000166738.j.a.b	ENSGT00920000149129.n	ENSGT00940000164868.B.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.a	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.a	ENSGT00550000075110.n	ENSGT01030000234558.D.b.g.b.a	ENSGT00950000183110.a.m	ENSGT00940000157774.j	ENSGT00390000007919.d	ENSGT00550000075064.h	ENSGT00940000165175.b.d	ENSGT00940000162790.a.u.b.b
Oncorhynchus	ANCESTRAL SPECIES	64	ENSGT00510000049239.a.c.d	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT01030000234887	ENSGT00390000013127.a.y #10	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c #9	ENSGT00940000166816.a	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b	ENSGT00940000157367.a.a.e #15	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a #37	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00940000161265.e.a.c #22	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727.g	ENSGT00940000166738.j.a.b	ENSGT00920000149129.n	ENSGT00940000164868.B.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.a	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.a	ENSGT00550000075110.n	ENSGT01030000234558.D.b.g.b.a	ENSGT00950000183110.a.m	ENSGT00940000157774.j	ENSGT00390000007919.d	ENSGT00550000075064.h	ENSGT00390000011347.e	ENSGT00940000165175.b.d
Rainbow trout	MODERN SPECIES	4	il2rb2 (ENSOMYG00000037653)	ENSOMYG00000037609	ENSOMYG00000037574	ENSOMYG00000037568 #10	ENSOMYG00000037556	atf4b (ENSOMYG00000037537) #9	adsl (ENSOMYG00000036187)	tmem150b (ENSOMYG00000036021)	ENSOMYG00000036011 #15	ENSOMYG00000056746	ENSOMYG00000036001	pvalb6 (ENSOMYG00000035985)	ENSOMYG00000063241	ENSOMYG00000067202	ENSOMYG00000035950	ENSOMYG00000035942 #22	ENSOMYG00000035111	ENSOMYG00000035022	ENSOMYG00000035016	ENSOMYG00000035005	ENSOMYG00000034991	ENSOMYG00000034982	ENSOMYG00000034976	pgls (ENSOMYG00000034971)	ENSOMYG00000034968	ENSOMYG00000034964	ENSOMYG00000034942	ENSOMYG00000034928	atp13a1 (ENSOMYG00000034838)	pbx4 (ENSOMYG00000034786)	ENSOMYG00000034758
Oncorhynchus_a	ANCESTRAL SPECIES	71	ENSGT00510000049239.a.c.d	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT01030000234887	ENSGT00390000013127.a.y #10	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c #9	ENSGT00940000166816.a	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b	ENSGT00940000157367.a.a.e #15	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a #37	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00940000161265.e.a.c #22	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727.g	ENSGT00940000166738.j.a.b	ENSGT00920000149129.n	ENSGT00940000164868.B.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.a	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.a	ENSGT00550000075110.n	ENSGT01030000234558.D.b.g.b.a	ENSGT00950000183110.a.m	ENSGT00940000157774.j	ENSGT00390000007919.d	ENSGT00550000075064.h	ENSGT00390000011347.e	ENSGT00940000165175.b.d
Chinook salmon	MODERN SPECIES	33	ENSOTSG00005001070	mief1 (ENSOTSG00005001064) #10	ENSOTSG00005001054	ENSOTSG00005000805	atf4b (ENSOTSG00005000730) #9	ENSOTSG00005044974	adsl (ENSOTSG00005044092)	tmem150b (ENSOTSG00005044086)	tmem150b (ENSOTSG00005044085)	ENSOTSG00005044081 #15	ENSOTSG00005044080	ENSOTSG00005044078	pvalb6 (ENSOTSG00005044076)	ENSOTSG00005044075 #37	ENSOTSG00005044074	dnal4a (ENSOTSG00005044073) #22	ENSOTSG00005044072	ENSOTSG00005044071	ENSOTSG00005044070	ENSOTSG00005044069	sp100.4 (ENSOTSG00005044068)	slc25a17 (ENSOTSG00005044065)	ENSOTSG00005044064	ENSOTSG00005044063	ENSOTSG00005044062	pgls (ENSOTSG00005044061)	COLGALT1 (ENSOTSG00005044057)	ENSOTSG00005044054	ENSOTSG00005044052	ENSOTSG00005044051	atp13a1 (ENSOTSG00005043484)
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	26	ENSOKIG00005010898	ENSOKIG00005010879	mief1 (ENSOKIG00005010863) #10	ENSOKIG00005010811	ENSOKIG00005010797	ENSOKIG00005010780	atf4b (ENSOKIG00005010768) #9	adsl (ENSOKIG00005009708)	ENSOKIG00005009624	tmem150b (ENSOKIG00005009597)	ENSOKIG00005009585 #15	ENSOKIG00005009576	pvalb6 (ENSOKIG00005009569)	ENSOKIG00005009561 #37	ENSOKIG00005009558	DNAL4 (ENSOKIG00005009547) #22	ENSOKIG00005009536	ENSOKIG00005009518	ENSOKIG00005009463	ENSOKIG00005009440	ENSOKIG00005009372	SLC25A17 (ENSOKIG00005009317)	ENSOKIG00005009309	ENSOKIG00005009302	ENSOKIG00005009294	pgls (ENSOKIG00005009273)	COLGALT1 (ENSOKIG00005009217)	ENSOKIG00005009176	ENSOKIG00005009169	ENSOKIG00005009146	ENSOKIG00005009123
Coho salmon	MODERN SPECIES	1	ENSOKIG00005037852	ENSOKIG00005037845	ENSOKIG00005037835	MIEF1 (ENSOKIG00005037819) #10	ENSOKIG00005037766	atf4b (ENSOKIG00005037753) #9	ENSOKIG00005037747	adsl (ENSOKIG00005037362)	tmem150b (ENSOKIG00005037309)	ENSOKIG00005037301	ENSOKIG00005037287 #15	ENSOKIG00005037267	pvalb6 (ENSOKIG00005037232)	ENSOKIG00005037224 #37	ENSOKIG00005037214	DNAL4 (ENSOKIG00005037195) #22	ENSOKIG00005036494	ENSOKIG00005036443	ENSOKIG00005036432	slc25a17 (ENSOKIG00005036395)	ENSOKIG00005036385	ENSOKIG00005036365	ENSOKIG00005036353	COLGALT1 (ENSOKIG00005035949)	ENSOKIG00005035844	ENSOKIG00005035795	atp13a1 (ENSOKIG00005035082)	pbx4 (ENSOKIG00005034919)	ENSOKIG00005034731	ENSOKIG00005034693	STXBP2 (ENSOKIG00005034430)
Salmo	ANCESTRAL SPECIES	28	ENSGT00990000211443	ENSGT00390000013127.a.x #10	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d #9	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a	ENSGT01030000234578.A.b.b.g.a	ENSGT01030000234578.A.b.b.g.b	ENSGT00940000157367.a.a.f #15	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b #37	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.c #22	ENSGT00940000163727.h.b.a	ENSGT00940000163727.h.a	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000161184.c.b	ENSGT00940000164868.B.b	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.b	ENSGT00550000075110.m	ENSGT01030000234558.D.b.g.b.b	ENSGT00950000183110.a.n	ENSGT00940000157774.i	ENSGT00390000007919.c
Atlantic salmon	MODERN SPECIES	22	ENSSSAG00000050252	ENSSSAG00000118109	ENSSSAG00000050223	ENSSSAG00000050210 #9	ENSSSAG00000097685	tmem150b (ENSSSAG00000122174)	tmem150b (ENSSSAG00000048454)	tmem150b (ENSSSAG00000003179)	adsl (ENSSSAG00000048519)	ENSSSAG00000048437 #15	ENSSSAG00000103865	prva (ENSSSAG00000048395)	ENSSSAG00000098739	ENSSSAG00000048379 #37	ENSSSAG00000109729	dnal4 (ENSSSAG00000101346) #22	ENSSSAG00000048283	ENSSSAG00000048237	ENSSSAG00000109359	ENSSSAG00000048179	ENSSSAG00000047612	ENSSSAG00000112991	ENSSSAG00000047537	pgls (ENSSSAG00000047518)	ENSSSAG00000046913	ENSSSAG00000105831	ENSSSAG00000093202	ENSSSAG00000089065	ENSSSAG00000046880	atp13a1 (ENSSSAG00000043533)	ENSSSAG00000110530
River trout	MODERN SPECIES	25	mpst (ENSSTUG00000015594)	ENSSTUG00000015588	ENSSTUG00000015572	mief1 (ENSSTUG00000015555) #10	ENSSTUG00000015502	ENSSTUG00000015488	atf4b (ENSSTUG00000015476) #9	ENSSTUG00000015469	adsl (ENSSTUG00000015232)	tmem150b (ENSSTUG00000015162)	ENSSTUG00000015140 #15	ENSSTUG00000015129	pvalb6 (ENSSTUG00000015113)	ENSSTUG00000015096 #37	ENSSTUG00000015091	dnal4a (ENSSTUG00000015079) #22	ENSSTUG00000015060	ENSSTUG00000015049	ENSSTUG00000015039	ENSSTUG00000015018	ENSSTUG00000015005	ENSSTUG00000014924	slc25a17 (ENSSTUG00000014894)	ENSSTUG00000014886	ENSSTUG00000014872	ENSSTUG00000014862	pgls (ENSSTUG00000014837)	COLGALT1 (ENSSTUG00000014718)	ENSSTUG00000014668	ENSSTUG00000014644	ENSSTUG00000014617
Salmoninae_a	ANCESTRAL SPECIES	60	ENSGT00990000211443	ENSGT00740000115744.g	ENSGT00390000013127.a.x #10	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d #9	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a	ENSGT01030000234578.A.b.b.g	ENSGT00940000157367.a.a.f #15	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b #37	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.d #22	ENSGT00940000163727.h.b	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00940000166738.j.a.a.a.a	ENSGT00920000149129.m	ENSGT00940000161184.c.b	ENSGT00940000164868.B.b	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.b	ENSGT00550000075110.m	ENSGT01030000234558.D.b.g.b.b	ENSGT00950000183110.a.n
Oncorhynchus	ANCESTRAL SPECIES	33	ENSGT00950000183045.A.b	ENSGT00740000115744.g	ENSGT00390000013127.a.x #10	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d #9	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a	ENSGT01030000234578.A.b.b.g	ENSGT00940000157367.a.a.f #15	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b #37	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.d #22	ENSGT00940000163727.h.b	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000154308.A.a.b.a.b.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.b	ENSGT00550000075110.m	ENSGT01030000234558.D.b.g.b.b	ENSGT00950000183110.a.n	ENSGT00940000157774.i.a	ENSGT00390000007919.c	ENSGT00550000075064.g	ENSGT00390000011347.f
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000040435	mief1 (ENSOMYG00000040428) #10	ENSOMYG00000040413	ENSOMYG00000040402	atf4b (ENSOMYG00000064242) #9	ENSOMYG00000055578	adsl (ENSOMYG00000040290)	ENSOMYG00000065328	tmem150b (ENSOMYG00000040236)	tmem150b (ENSOMYG00000040225)	ENSOMYG00000040210 #15	ENSOMYG00000040203	pvalb6 (ENSOMYG00000066669)	ENSOMYG00000040182 #37	ENSOMYG00000040170	ENSOMYG00000005630 #22	ENSOMYG00000040143	ENSOMYG00000040104	ENSOMYG00000040015	ENSOMYG00000040005	ENSOMYG00000040001	ENSOMYG00000039996	ENSOMYG00000039987	pgls (ENSOMYG00000039981)	ENSOMYG00000039960	ENSOMYG00000039922	ENSOMYG00000039915	atp13a1 (ENSOMYG00000039233)	ENSOMYG00000038957	pbx4 (ENSOMYG00000038928)	lpar2a (ENSOMYG00000038892)
Salmo	ANCESTRAL SPECIES																	ENSGT00940000161265.e.a.d #22
Atlantic salmon	MODERN SPECIES	25	ENSSSAG00000002157	UBC9 (ENSSSAG00000002161)	ENSSSAG00000002181	MIEF1 (ENSSSAG00000002213) #10	CATD (ENSSSAG00000002280)	atf4b (ENSSSAG00000002422) #9	ENSSSAG00000096081	adsl (ENSSSAG00000002543)	ENSSSAG00000003188 #15	ENSSSAG00000003203	ENSSSAG00000003253 #37	pvalb6 (ENSSSAG00000105717)	ENSSSAG00000121865	ENSSSAG00000003269	ENSSSAG00000096095	ENSSSAG00000109776 #22	ENSSSAG00000003343	ENSSSAG00000096162	ENSSSAG00000121173	ENSSSAG00000003650	ENSSSAG00000101338	ENSSSAG00000120018	ENSSSAG00000003681	pgls (ENSSSAG00000094499)	ENSSSAG00000003752	ENSSSAG00000084332	ENSSSAG00000003771	atp13a1 (ENSSSAG00000003858)	ENSSSAG00000005170	pbx4 (ENSSSAG00000095017)	ENSSSAG00000005229
Huchen	MODERN SPECIES	365	mpst (ENSHHUG00000023383)	ENSHHUG00000023376	mief1 (ENSHHUG00000023372) #10	ENSHHUG00000023366	ENSHHUG00000023350	atf4b (ENSHHUG00000023344) #9	ENSHHUG00000023338	adsl (ENSHHUG00000023219)	tmem150b (ENSHHUG00000023216)	tmem150b (ENSHHUG00000023215)	ENSHHUG00000023212 #15	ENSHHUG00000023208	pvalb6 (ENSHHUG00000023206)	ENSHHUG00000023200 #37	ENSHHUG00000023197	dnal4a (ENSHHUG00000023186) #22	ENSHHUG00000023148	ENSHHUG00000023146	ENSHHUG00000023137	ENSHHUG00000023134	ENSHHUG00000023129	ENSHHUG00000023036	slc25a17 (ENSHHUG00000023028)	ENSHHUG00000023026	ENSHHUG00000023018	ENSHHUG00000023012	pgls (ENSHHUG00000022996)	COLGALT1 (ENSHHUG00000022968)	ENSHHUG00000022951	ENSHHUG00000022930	ENSHHUG00000022922
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Protacanthopterygii	ANCESTRAL SPECIES	218									ENSGT00940000157367.a.b #15	ENSGT00510000048561	ENSGT00940000159653.g.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a
Salmoninae	ANCESTRAL SPECIES	881										ENSGT00940000157367.a.b #15	ENSGT00510000048561.g.a	ENSGT00940000159653.g.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756.i.b #36	ENSGT01060000248591.a.a.a.b.b.d	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a
Huchen	DUPLICATION
Huchen	DUPLICATION
Huchen	MODERN SPECIES	2354												ENSHHUG00000051743 #36	ENSHHUG00000051744 #36	cbx6a (ENSHHUG00000051753) #20	nptxrb (ENSHHUG00000051790)	DNAL4 (ENSHHUG00000051795) #22	ENSHHUG00000051798	ENSHHUG00000051803	ENSHHUG00000051804	ENSHHUG00000051806	ENSHHUG00000051814
Huchen	MODERN SPECIES	6865													pla2g6 (ENSHHUG00000007266) #36	cbx6a (ENSHHUG00000007276) #20	nptxrb (ENSHHUG00000007287)	DNAL4 (ENSHHUG00000007294) #22
Huchen	MODERN SPECIES	11121																DNAL4 (ENSHHUG00000013271) #22
Salmoninae_a	ANCESTRAL SPECIES	159	ENSGT01060000249116.b	ENSGT01010000222294.c.b.b.b.c.a.b.b.a.a.a.b.a	ENSGT01010000222294.c.b.b.b.c.a.b.b.a.a.a.b.b.a	ENSGT00940000157367.a.b.c #15	ENSGT00510000048561.g.a	ENSGT00940000159653.g.b.g.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756.i.b #36	ENSGT01060000248591.a.a.a.b.b.c.b	ENSGT00940000157367.a.b.d #15	ENSGT00510000048561.h	ENSGT00940000159653.g.b.g.a	ENSGT00940000158756.i.a #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b.d	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a.e	ENSGT01030000234576.D.a.b.a.b.a.a.a.b.b.b.a.b.a.b.b.b.b.b.a.b.a
Salmo	ANCESTRAL SPECIES	159							ENSGT00940000157367.a.b.d #15	ENSGT00510000048561.g.a	ENSGT00940000159653.g.b.g.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756.i.a #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b.c.a	ENSGT00940000158756.i.b #36	ENSGT01060000248591.a.a.a.b.b.c.b	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a.f	ENSGT01030000234576.D.a.b.a.b.a.a.a.b.b.b.a.b.a.b.b.a.b	ENSGT01030000234576.D.a.b.a.b.a.a.a.b.b.b.a.b.a.b.b.a.a	ENSGT00940000153582.a.m.a.a.b.b.b.b.b.a.b.b.a.a.b.b.a.b.b.a	ENSGT00940000153582.a.m.a.a.b.b.b.a.b.a.a.b.a.b.a.b.a	ENSGT01100000263520.a.b.a.b.c.a.b.a.b.b.b.b	ENSGT01030000234576.D.a.b.a.b.a.a.a.b.b.b.a.b.a.b.b.b.b.a.b	ENSGT01030000234576.D.a.b.a.b.a.a.a.b.b.b.a.a.a.b	ENSGT00530000063801.a.a.g #9	ENSGT01030000234599.a.b.d.b.b.a.b
River trout	DUPLICATION
River trout	MODERN SPECIES	5	ENSSTUG00000037092	ENSSTUG00000037077	ENSSTUG00000037067	ENSSTUG00000037034	ENSSTUG00000036950	ENSSTUG00000036967	KCNIP2 (ENSSTUG00000036939)	ENSSTUG00000036938	ENSSTUG00000036924	ENSSTUG00000036912 #15	ncf4 (ENSSTUG00000036894)	pvalb7 (ENSSTUG00000036886)	baiap2l2b (ENSSTUG00000036878) #37	pla2g6 (ENSSTUG00000036473) #36	nptxrb (ENSSTUG00000036452)	DNAL4 (ENSSTUG00000036443) #22	ENSSTUG00000036238	ENSSTUG00000036222	ENSSTUG00000036220	ENSSTUG00000036217	ENSSTUG00000036208	ENSSTUG00000036203	ENSSTUG00000036135	ENSSTUG00000036126	ENSSTUG00000036122	ENSSTUG00000036120	ENSSTUG00000036116	ENSSTUG00000036108	ENSSTUG00000036101	ENSSTUG00000036087	ENSSTUG00000036078
River trout	MODERN SPECIES	31	ENSSTUG00000026473	ENSSTUG00000026500	ENSSTUG00000026518	ENSSTUG00000026592	ENSSTUG00000026596	ENSSTUG00000026604	ENSSTUG00000026619	ENSSTUG00000026634	ENSSTUG00000026651	ENSSTUG00000026653	ENSSTUG00000026657 #15	pvalb7 (ENSSTUG00000026662)	baiap2l2b (ENSSTUG00000026687) #37	pla2g6 (ENSSTUG00000026720) #36	nptxrb (ENSSTUG00000026932)	DNAL4 (ENSSTUG00000026950) #22	ENSSTUG00000026966	ENSSTUG00000027031	ENSSTUG00000027062	ENSSTUG00000027080	ENSSTUG00000027095	ENSSTUG00000027121	ENSSTUG00000027113	ENSSTUG00000027128	ENSSTUG00000027133	ENSSTUG00000027147	ENSSTUG00000027164	ENSSTUG00000027171	ENSSTUG00000027181	atf4a (ENSSTUG00000027184) #9	ENSSTUG00000027191
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000001850	ENSSSAG00000008837	ENSSSAG00000008855	ENSSSAG00000001428	ENSSSAG00000091144	ENSSSAG00000121712	ENSSSAG00000098351	ENSSSAG00000086889	ENSSSAG00000106934	ENSSSAG00000001943 #15	ENSSSAG00000092591	ncf4 (ENSSSAG00000001947)	pla2g6 (ENSSSAG00000002042) #36	cbx6a (ENSSSAG00000090006) #20	ENSSSAG00000099636	ENSSSAG00000008404 #22	ENSSSAG00000003348	ENSSSAG00000085641	ENSSSAG00000111892	ENSSSAG00000004219	ENSSSAG00000090239	ENSSSAG00000058772	ENSSSAG00000004171	ENSSSAG00000009649	ENSSSAG00000113438	ENSSSAG00000111712	ENSSSAG00000009634	ENSSSAG00000086380	ENSSSAG00000092204	ENSSSAG00000105120	ENSSSAG00000083774
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b.e #22
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000065313	ENSOMYG00000056337	ENSOMYG00000064677	ENSOMYG00000055470	ENSOMYG00000052865	ENSOMYG00000069090	ENSOMYG00000050440	ENSOMYG00000005276	ENSOMYG00000071710 #15	ENSOMYG00000050939	ncf4 (ENSOMYG00000069276)	ENSOMYG00000066839	pla2g6 (ENSOMYG00000071749) #36	cbx6a (ENSOMYG00000005598) #20	ENSOMYG00000058166	ENSOMYG00000059253 #22	ENSOMYG00000058465	ENSOMYG00000008727	ENSOMYG00000066064	ENSOMYG00000007808	ENSOMYG00000047896	ENSOMYG00000063963	ENSOMYG00000063726	ENSOMYG00000008616 #9	ENSOMYG00000008584	ENSOMYG00000048283	ENSOMYG00000008523 #8	ENSOMYG00000008468	ENSOMYG00000008404	ENSOMYG00000077211	ENSOMYG00000076461
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b.e #22
Coho salmon	MODERN SPECIES	494													ENSOKIG00005047359 #37	PLA2G6 (ENSOKIG00005047390) #36	nptxrb (ENSOKIG00005047495)	DNAL4 (ENSOKIG00005041084) #22
Oncorhynchus	ANCESTRAL SPECIES	187											ENSGT00940000159653.g.b.g.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756.i.a #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b.d	ENSGT00940000161265.e.b.f #22	ENSGT00950000182951.A.a.b.a.e	ENSGT01030000234576.D.a.b.a.b.a.a.a.b.b.b.a.b.a.b.b.b.b.b.a.b.a
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000069678	ENSOMYG00000050715	ENSOMYG00000069513	ENSOMYG00000005207	ENSOMYG00000072675	ENSOMYG00000061457	ENSOMYG00000076182	ENSOMYG00000074609 #15	ENSOMYG00000068641	ncf4 (ENSOMYG00000066062)	ENSOMYG00000071226	pvalb7 (ENSOMYG00000057223)	baiap2l2b (ENSOMYG00000048265) #37	pla2g6 (ENSOMYG00000049417) #36	ENSOMYG00000005740	ENSOMYG00000066989 #22	ENSOMYG00000005647	ENSOMYG00000005758	ENSOMYG00000070969	ENSOMYG00000057418	ENSOMYG00000066710	ENSOMYG00000065150	ENSOMYG00000060047	ENSOMYG00000065829 #9	ENSOMYG00000072894	ENSOMYG00000055222 #8	ENSOMYG00000064768	ENSOMYG00000050911	ENSOMYG00000058578	ENSOMYG00000054588	ENSOMYG00000077742
Oncorhynchus_a	ANCESTRAL SPECIES	285													ENSGT00940000158756.i.a #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b.d	ENSGT00940000161265.e.b.f #22	ENSGT00950000182951.A.a.b.a.e	ENSGT01010000222294.c.b.b.b.c.a.a.b.a.b	ENSGT01010000223589.B.b
Chinook salmon	MODERN SPECIES	1679																DNAL4 (ENSOTSG00005018938) #22
Coho salmon	MODERN SPECIES	30	slit1b (ENSOKIG00005038800)	ARHGAP19 (ENSOKIG00005038309)	ENSOKIG00005038256	ENSOKIG00005038221	ENSOKIG00005038212	ENSOKIG00005038140	ENSOKIG00005038091	ENSOKIG00005038025	KCNIP2 (ENSOKIG00005038004)	ENSOKIG00005037993 #15	ncf4 (ENSOKIG00005037882)	pvalb7 (ENSOKIG00005037850)	baiap2l2b (ENSOKIG00005037832) #37	pla2g6 (ENSOKIG00005037417) #36	ENSOKIG00005037275	DNAL4 (ENSOKIG00005037243) #22	ENSOKIG00005037092	ENSOKIG00005037069	ENSOKIG00005037053	ENSOKIG00005037026	ENSOKIG00005036979	ENSOKIG00005036941	ENSOKIG00005036915	ENSOKIG00005036897	fam83fb (ENSOKIG00005036890)	ENSOKIG00005036886	ENSOKIG00005036880	ENSOKIG00005036872	cyth4b (ENSOKIG00005036650)	ENSOKIG00005036535	ENSOKIG00005036517
Northern pike	MODERN SPECIES	8	TRMT1 (ENSELUG00000021659)	man2b1 (ENSELUG00000021635)	NKX2-3 (ENSELUG00000021612)	slc25a28 (ENSELUG00000021605)	ENTPD7 (ENSELUG00000021567)	ENSELUG00000000939	atpv0e2 (ENSELUG00000021480)	ENSELUG00000021447	ENSELUG00000021419 #15	ncf4 (ENSELUG00000021383)	pvalb7 (ENSELUG00000021356)	baiap2l2b (ENSELUG00000021331) #37	pla2g6 (ENSELUG00000021286) #36	cbx6a (ENSELUG00000028388) #20	nptxrb (ENSELUG00000020955)	dnal4 (ENSELUG00000020890) #22	ENSELUG00000000913	ENSELUG00000024825	ENSELUG00000028071	atf4a (ENSELUG00000020799) #9	ENSELUG00000033522	ENSELUG00000020762	ENSELUG00000020698	ENSELUG00000033485 #8	TST (ENSELUG00000020664)	ENSELUG00000020645	TMPRSS6 (ENSELUG00000020607)	MGAT3 (ENSELUG00000020521) #11	TAB1 (ENSELUG00000020502) #12	CACNG2 (ENSELUG00000020488)	IFT27 (ENSELUG00000020469)
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Perciformes	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Cottioidei	ANCESTRAL SPECIES	54	ENSGT00950000183209.b.a.b	ENSGT00940000155129.B	ENSGT00940000160446	ENSGT00940000163377.a.b.a	ENSGT00950000182975.a.b.a.b	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT00940000161265.e.b #22	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37
Stickleback	MODERN SPECIES	4	dpy30 (ENSGACG00000019898)	psen2 (ENSGACG00000019890)	ENSGACG00000019887	slc8a1a (ENSGACG00000019885)	GPR108 (ENSGACG00000019882)	ENSGACG00000019880	ENSGACG00000019878	CAMSAP3 (ENSGACG00000019875)	LPAR2 (ENSGACG00000019874)	akap8l (ENSGACG00000019873)	ENSGACG00000019872	vasna (ENSGACG00000019871)	dnaja3b (ENSGACG00000019868)	pla2g6 (ENSGACG00000019856) #36	cbx6a (ENSGACG00000019854) #20	DNAL4 (ENSGACG00000019852) #22	ENSGACG00000019850	baiap2l2b (ENSGACG00000019848) #37	ENSGACG00000019846 #8	atf4a (ENSGACG00000019842) #9	ENSGACG00000019841	ENSGACG00000019826	yju2b (ENSGACG00000019822)	ENSGACG00000019821	wdr83 (ENSGACG00000019818)	wdr83os (ENSGACG00000019815)	ENSGACG00000019813	sp2 (ENSGACG00000019811)	ENSGACG00000019810	ENSGACG00000019809	mrpl4 (ENSGACG00000019808)
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11
Gilthead seabream	MODERN SPECIES		ENSSAUG00010000123	ENSSAUG00010000107	LPAR2 (ENSSAUG00010000101)	ENSSAUG00010000097	akap8l (ENSSAUG00010000096)	ENSSAUG00010000094	GLIS2 (ENSSAUG00010000093)	b3galt10.2 (ENSSAUG00010000092)	ENSSAUG00010000091	vasna (ENSSAUG00010000089)	dnaja3b (ENSSAUG00010000066)	pdgfaa (ENSSAUG00010000035)	pla2g6 (ENSSAUG00010014688) #36	cbx6a (ENSSAUG00010014674) #20	nptxrb (ENSSAUG00010014673)	DNAL4 (ENSSAUG00010014670) #22	ENSSAUG00010014667	pvalb7 (ENSSAUG00010014665)	ncf4 (ENSSAUG00010014551)	ENSSAUG00010014548 #15	ENSSAUG00010014545 #23	atf4a (ENSSAUG00010014543) #9	ENSSAUG00010014537	ENSSAUG00010014535 #8	ENSSAUG00010014533	ENSSAUG00010014531	TMPRSS6 (ENSSAUG00010014529)	ENSSAUG00010014526	MGAT3 (ENSSAUG00010014525) #11	TAB1 (ENSSAUG00010013343) #12	SYNGR1 (ENSSAUG00010013331) #13
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
Carangaria	ANCESTRAL SPECIES		ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12
Pleuronectoidei	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Turbot	MODERN SPECIES	20	ENSSMAG00000021229	ENSSMAG00000021225	akap8l (ENSSMAG00000021221)	ENSSMAG00000021220	ENSSMAG00000021219	ENSSMAG00000021218	ENSSMAG00000021217	vasna (ENSSMAG00000021216)	ENSSMAG00000024520	ENSSMAG00000021214	ENSSMAG00000031297	ENSSMAG00000021211	ENSSMAG00000021209 #36	ENSSMAG00000021207 #20	ENSSMAG00000021206	ENSSMAG00000037136 #22	ENSSMAG00000021198	baiap2l2b (ENSSMAG00000021196) #37	pvalb7 (ENSSMAG00000021195)	ncf4 (ENSSMAG00000021193)	ENSSMAG00000021177 #15	ENSSMAG00000030466 #23	atf4a (ENSSMAG00000021176) #9	ENSSMAG00000021175 #8	TST (ENSSMAG00000032326)	ENSSMAG00000021172	ENSSMAG00000021171	ENSSMAG00000030504	ENSSMAG00000024087	MGAT3 (ENSSMAG00000021169) #11	ENSSMAG00000021168 #12
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00940000161265.e.b #22
Denticle herring	MODERN SPECIES	17	ENSDCDG00000008692	mief1 (ENSDCDG00000008699) #10	ENSDCDG00000008741	napsa (ENSDCDG00000009245)	ENSDCDG00000009263	atf4b (ENSDCDG00000009268) #9	adsl (ENSDCDG00000009345)	tmem150b (ENSDCDG00000009862)	ENSDCDG00000009885 #23	ENSDCDG00000009896 #15	ENSDCDG00000009905	pvalb6 (ENSDCDG00000009913)	ENSDCDG00000009919 #37	CBX6 (ENSDCDG00000009927) #20	ENSDCDG00000009931	DNAL4 (ENSDCDG00000009933) #22	ENSDCDG00000009936	ENSDCDG00000009938	ENSDCDG00000009945	nptx1l (ENSDCDG00000010974)	pecam1a (ENSDCDG00000010988)	PPP1R27 (ENSDCDG00000011012)	mcrip1 (ENSDCDG00000011019)	alyref (ENSDCDG00000011032)	ARHGDIA (ENSDCDG00000011044)	cdr2l (ENSDCDG00000011051)	RECQL5 (ENSDCDG00000011074)	ENSDCDG00000011099	xylt2 (ENSDCDG00000011116)	ENSDCDG00000011141	NHERF1 (ENSDCDG00000011616)
Clupeocephala	ANCESTRAL SPECIES	5	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b #9	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b	ENSGT00940000160024 #23	ENSGT00940000157367.a.b #15	ENSGT00940000178227.b	ENSGT00940000157367.a.a #15	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g #37	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a #22	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000158365.f.b #16	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618
Euteleosteomorpha	ANCESTRAL SPECIES	326								ENSGT00940000160024 #23	ENSGT00940000157367.a.b #15	ENSGT00510000048561	ENSGT00940000159653.g.b	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a
Acanthomorphata	ANCESTRAL SPECIES	288													ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23
Euacanthomorphacea	ANCESTRAL SPECIES	47													ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11
Percomorphaceae	ANCESTRAL SPECIES	17	ENSGT00950000182975.a.b.a.b	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	518	ENSHCOG00000003112	GPR108 (ENSHCOG00000003152)	ENSHCOG00000003155	ENSHCOG00000003164	ENSHCOG00000003169	LPAR2 (ENSHCOG00000003187)	ENSHCOG00000003381	akap8l (ENSHCOG00000003420)	ENSHCOG00000003430	b3galt10.2 (ENSHCOG00000003435)	vasna (ENSHCOG00000003440)	dnaja3b (ENSHCOG00000003463)	ENSHCOG00000003487	pla2g6 (ENSHCOG00000003502) #36	ENSHCOG00000003527 #20	DNAL4 (ENSHCOG00000003538) #22	ENSHCOG00000003557	baiap2l2b (ENSHCOG00000003572) #37	pvalb7 (ENSHCOG00000003583)	ncf4 (ENSHCOG00000003589)	ENSHCOG00000003623 #15	ENSHCOG00000003638 #23	ndufb6 (ENSHCOG00000003650)	toporsa (ENSHCOG00000003662)	ENSHCOG00000003671	mtap (ENSHCOG00000003721)	ENSHCOG00000003726	CXXC4 (ENSHCOG00000003734)	TET2 (ENSHCOG00000003746)	ppa2 (ENSHCOG00000003790)	ARHGEF38 (ENSHCOG00000004074)
Tiger tail seahorse	MODERN SPECIES	345	AIPL1 (ENSHCOG00000016016)	ENSHCOG00000015993	ENSHCOG00000015992	slco1c1 (ENSHCOG00000015982)	bcap29 (ENSHCOG00000015925)	dus4l (ENSHCOG00000015919)	rflnb (ENSHCOG00000015900)	vps53 (ENSHCOG00000015892)	zgc:172282 (ENSHCOG00000000756)	zgc:162730 (ENSHCOG00000015801)	zgc:114130 (ENSHCOG00000015800)	trappc6bl (ENSHCOG00000015795)	bloc1s3 (ENSHCOG00000015788)	ENSHCOG00000015780	ENSHCOG00000015707	DNAL4 (ENSHCOG00000015693) #22	yif1b (ENSHCOG00000015674)	ENSHCOG00000015647	FCHSD2 (ENSHCOG00000015616)	relt (ENSHCOG00000000433)	ARHGEF17 (ENSHCOG00000015568)	P2RY6 (ENSHCOG00000015482)	fam168a (ENSHCOG00000015473)	KBTBD3 (ENSHCOG00000015465)	ALKBH8 (ENSHCOG00000015443)	ENSHCOG00000015387	cwf19l2 (ENSHCOG00000015378)	GUCY1A2 (ENSHCOG00000015363)	aasdhppt (ENSHCOG00000015250)	ENSHCOG00000015234	gria4a (ENSHCOG00000015215)
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT01050000244941.B.c.b.a	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT01050000244941.B.c.b.a	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104
Tetraodontidae	ANCESTRAL SPECIES	16	ENSGT00940000163377.a.b.a	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024.e #23	ENSGT00530000063801.a.a #9	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c.e #13
Fugu	MODERN SPECIES	8	akap8l (ENSTRUG00000016038)	GLIS2 (ENSTRUG00000033395)	ENSTRUG00000031368	b3galt10.2 (ENSTRUG00000001218)	ENSTRUG00000017339	vasna (ENSTRUG00000022296)	dnaja3b (ENSTRUG00000017341)	PDGFA (ENSTRUG00000017346)	ENSTRUG00000033033	ENSTRUG00000031472	ENSTRUG00000027172	ENSTRUG00000030131	pla2g6 (ENSTRUG00000004138) #36	cbx6a (ENSTRUG00000027286) #20	nptxrb (ENSTRUG00000003680)	dnal4 (ENSTRUG00000030549) #22	fam20c4 (ENSTRUG00000003447)	baiap2l2b (ENSTRUG00000026195) #37	pvalb (ENSTRUG00000028627)	ncf4 (ENSTRUG00000002602)	ENSTRUG00000022420 #15	ENSTRUG00000021717 #23	atf4a (ENSTRUG00000028905) #9	ENSTRUG00000022435 #8	TST (ENSTRUG00000028149)	ENSTRUG00000022729	TMPRSS6 (ENSTRUG00000000036)	ENSTRUG00000033441	ENSTRUG00000030911	MGAT3 (ENSTRUG00000000029) #11	SYNGR1 (ENSTRUG00000033433) #13
Tetraodon	MODERN SPECIES	10	ENSTNIG00000000033	CAMSAP3 (ENSTNIG00000003513)	ENSTNIG00000000461	LPAR2 (ENSTNIG00000003514)	ENSTNIG00000003515	akap8l (ENSTNIG00000001231)	GLIS2 (ENSTNIG00000003516)	b3galt10.2 (ENSTNIG00000002918)	ENSTNIG00000001050	vasna (ENSTNIG00000007573)	dnaja3b (ENSTNIG00000002917)	PDGFA (ENSTNIG00000018844)	pla2g6 (ENSTNIG00000018843) #36	cbx6a (ENSTNIG00000018842) #20	nptxrb (ENSTNIG00000018841)	dnal4b (ENSTNIG00000018840) #22	ENSTNIG00000018839	baiap2l2b (ENSTNIG00000018838) #37	pvalb7 (ENSTNIG00000018837)	ncf4 (ENSTNIG00000018836)	ENSTNIG00000018835 #15	ENSTNIG00000018834 #23	ENSTNIG00000018833	atf4a (ENSTNIG00000000373) #9	ENSTNIG00000018832 #8	TST (ENSTNIG00000018831)	TMPRSS6 (ENSTNIG00000018830)	ENSTNIG00000018829	MGAT3 (ENSTNIG00000018828) #11	TAB1 (ENSTNIG00000018827) #12	ENSTNIG00000018826
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104
Ballan wrasse	MODERN SPECIES	7	GPR108 (ENSLBEG00000010542)	ENSLBEG00000010604	ENSLBEG00000010677	LPAR2 (ENSLBEG00000010701)	ENSLBEG00000010726	akap8l (ENSLBEG00000010793)	ENSLBEG00000010856	b3galt10.2 (ENSLBEG00000010879)	ENSLBEG00000010898	ENSLBEG00000010920	vasna (ENSLBEG00000010934)	dnaja3b (ENSLBEG00000010949)	pdgfaa (ENSLBEG00000010986)	pla2g6 (ENSLBEG00000011023) #36	cbx6a (ENSLBEG00000011103) #20	dnal4b (ENSLBEG00000011184) #22	ENSLBEG00000011217	baiap2l2b (ENSLBEG00000011258) #37	ENSLBEG00000011297	ncf4 (ENSLBEG00000011339)	ENSLBEG00000011393 #15	ENSLBEG00000011471 #23	atf4a (ENSLBEG00000011534) #9	ENSLBEG00000011548 #8	ENSLBEG00000011561	ENSLBEG00000011573	TMPRSS6 (ENSLBEG00000011606)	ENSLBEG00000011657	MGAT3 (ENSLBEG00000011687) #11	TAB1 (ENSLBEG00000011732) #12	SYNGR1 (ENSLBEG00000011782) #13
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00940000163377.a.b.a	ENSGT00950000182975.a.b.a.b	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
European seabass	MODERN SPECIES	20	ENSDLAG00005031048	ENSDLAG00005032356	ENSDLAG00005033845	ENSDLAG00005031529	ENSDLAG00005001493	vasna (ENSDLAG00005033979)	ENSDLAG00005001508	ENSDLAG00005001541	ENSDLAG00005033695	ENSDLAG00005001555	ENSDLAG00005032218	ENSDLAG00005027538	ENSDLAG00005001593 #36	ENSDLAG00005001758 #20	nptxrb (ENSDLAG00005001768)	ENSDLAG00005029072 #22	ENSDLAG00005001789	ENSDLAG00005027026	ENSDLAG00005033883	pvalb7 (ENSDLAG00005001865)	ENSDLAG00005026422	ENSDLAG00005019279 #15	ENSDLAG00005001887 #23	atf4a (ENSDLAG00005001907) #9	ENSDLAG00005001920	ENSDLAG00005029567	ENSDLAG00005034565	ENSDLAG00005001948	ENSDLAG00005002006	MGAT3 (ENSDLAG00005002010) #11	ENSDLAG00005002041 #12
Large yellow croaker	MODERN SPECIES	481	ltv1 (ENSLCRG00005005488)	ENSLCRG00005005492	capn9 (ENSLCRG00005005500)	taf5l (ENSLCRG00005005571)	nup133 (ENSLCRG00005005595)	ACTA1 (ENSLCRG00005007073)	CCSAP (ENSLCRG00005007075)	cdc6 (ENSLCRG00005007076)	ENSLCRG00005007079	dnaja3b (ENSLCRG00005007081)	PDGFA (ENSLCRG00005007085)	ENSLCRG00005007088	pla2g6 (ENSLCRG00005007106) #36	cbx6a (ENSLCRG00005007124) #20	nptxrb (ENSLCRG00005007125)	dnal4b (ENSLCRG00005007126) #22	ENSLCRG00005007130	baiap2l2b (ENSLCRG00005007488) #37	pvalb7 (ENSLCRG00005007489)	ncf4 (ENSLCRG00005007490)	ENSLCRG00005007564 #15	ENSLCRG00005007565 #23	ENSLCRG00005007566	ENSLCRG00005007568	ENSLCRG00005007569	atf4a (ENSLCRG00005007572) #9	ENSLCRG00005007574	ENSLCRG00005007577 #8	ENSLCRG00005007578	ENSLCRG00005007585	TMPRSS6 (ENSLCRG00005007595)
Perciformes	ANCESTRAL SPECIES	2	ENSGT00950000182975.a.b.a.b	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c.e #13
Cottioidei	ANCESTRAL SPECIES	54	ENSGT00940000160446	ENSGT00940000163377.a.b.a	ENSGT00950000182975.a.b.a.b	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT00940000161265.e.b #22	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37
Lumpfish	MODERN SPECIES		TAB1 (ENSCLMG00005011231) #12	MGAT3 (ENSCLMG00005011306) #11	ENSCLMG00005011309	ENSCLMG00005011311	ENSCLMG00005011316	ENSCLMG00005011320	ENSCLMG00005011325	ENSCLMG00005011328 #8	atf4a (ENSCLMG00005011331) #9	ENSCLMG00005011340	ENSCLMG00005011344 #23	ENSCLMG00005011345	ncf4 (ENSCLMG00005011347)	PVALB (ENSCLMG00005011363)	nptxrb (ENSCLMG00005011365)	dnal4b (ENSCLMG00005011367) #22	ENSCLMG00005011369	ENSCLMG00005011371	cbx6a (ENSCLMG00005011372) #20	pla2g6 (ENSCLMG00005011374) #36	dnaja3b (ENSCLMG00005002942)	vasna (ENSCLMG00005004063)	ENSCLMG00005004064	b3galt10.2 (ENSCLMG00005004066)	akap8l (ENSCLMG00005004070)	ENSCLMG00005004074	ENSCLMG00005004078	ENSCLMG00005004080	LPAR2 (ENSCLMG00005004081)	ENSCLMG00005004083	ENSCLMG00005004084
Perciformes_a	ANCESTRAL SPECIES		ENSGT00940000163377.a.b.a	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c.e #13	ENSGT00870000136549
Pike perch	MODERN SPECIES	8	ENSSLUG00000000291	akap8l (ENSSLUG00000000268)	ENSSLUG00000000261	GLIS2 (ENSSLUG00000000255)	b3galt10.2 (ENSSLUG00000000248)	ENSSLUG00000000244	ENSSLUG00000000242	vasna (ENSSLUG00000000239)	DNAJA3 (ENSSLUG00000000231)	pdgfaa (ENSSLUG00000000222)	ENSSLUG00000000219	ENSSLUG00000000215	pla2g6 (ENSSLUG00000000188) #36	cbx6a (ENSSLUG00000000175) #20	nptxrb (ENSSLUG00000000171)	dnal4b (ENSSLUG00000000167) #22	ENSSLUG00000000149	pvalb7 (ENSSLUG00000000126)	ncf4 (ENSSLUG00000000113)	ENSSLUG00000000100	ENSSLUG00000000095 #15	ENSSLUG00000015651 #23	atf4a (ENSSLUG00000015644) #9	ENSSLUG00000015636 #8	ENSSLUG00000015631	TMPRSS6 (ENSSLUG00000015609)	ENSSLUG00000015600	MGAT3 (ENSSLUG00000015589) #11	TAB1 (ENSSLUG00000015436) #12	SYNGR1 (ENSSLUG00000015378) #13	IFT27 (ENSSLUG00000015366)
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614
Anabantoidei	ANCESTRAL SPECIES		ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B.a	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614
Siamese fighting fish	MODERN SPECIES		ENSBSLG00000000189	akap8l (ENSBSLG00000000174)	ENSBSLG00000000165	GLIS2 (ENSBSLG00000000161)	b3galt10.1 (ENSBSLG00000000155)	ENSBSLG00000000151	ENSBSLG00000000147	vasna (ENSBSLG00000000144)	dnaja3b (ENSBSLG00000000131)	ENSBSLG00000000122	ENSBSLG00000000103	ENSBSLG00000004473	pla2g6 (ENSBSLG00000004456) #36	cbx6a (ENSBSLG00000004440) #20	nptxrb (ENSBSLG00000004435)	dnal4b (ENSBSLG00000004431) #22	ENSBSLG00000004427	ENSBSLG00000004422	ENSBSLG00000004385	baiap2l2b (ENSBSLG00000004371) #37	pvalb7 (ENSBSLG00000004368)	ncf4 (ENSBSLG00000004355)	ENSBSLG00000004351 #15	VAV1 (ENSBSLG00000004011)	ENSBSLG00000003853	TRIP10 (ENSBSLG00000003802)	ENSBSLG00000003747	MFAP4 (ENSBSLG00000003700)	OLFM2 (ENSBSLG00000003588)	rdh8b (ENSBSLG00000002617)	ENSBSLG00000002585
Climbing perch	MODERN SPECIES		akap8l (ENSATEG00000003803)	ENSATEG00000003785	ENSATEG00000003778	ENSATEG00000027076	ENSATEG00000003759	vasna (ENSATEG00000026986)	ENSATEG00000003668	ENSATEG00000003640	ENSATEG00000003632	ENSATEG00000003569	ENSATEG00000003605	ENSATEG00000003562 #36	ENSATEG00000003501 #20	ENSATEG00000026398	ENSATEG00000003482	dnal4b (ENSATEG00000003464) #22	ENSATEG00000029072	ENSATEG00000003365	baiap2l2b (ENSATEG00000003300) #37	pvalb7 (ENSATEG00000003271)	ncf4 (ENSATEG00000003256)	ENSATEG00000003191 #15	ENSATEG00000003183 #23	ENSATEG00000029951	atf4a (ENSATEG00000003085) #9	ENSATEG00000003075	ENSATEG00000003066 #8	ENSATEG00000025290	ENSATEG00000003037	ENSATEG00000027942	ENSATEG00000002975
Zig-zag eel	MODERN SPECIES		ENSMAMG00000027352	ENSMAMG00000006041	ENSMAMG00000006015	akap8l (ENSMAMG00000005949)	ENSMAMG00000005935	ENSMAMG00000005901	ENSMAMG00000005881	ENSMAMG00000005875	vasna (ENSMAMG00000005863)	ENSMAMG00000005820	ENSMAMG00000005801	ENSMAMG00000005776	ENSMAMG00000005741 #36	ENSMAMG00000005708 #20	nptxrb (ENSMAMG00000026534)	ENSMAMG00000005657 #22	ENSMAMG00000028352	ENSMAMG00000005621	baiap2l2b (ENSMAMG00000024856) #37	pvalb7 (ENSMAMG00000005564)	ncf4 (ENSMAMG00000005180)	ENSMAMG00000026384 #15	ENSMAMG00000005133 #23	atf4a (ENSMAMG00000005127) #9	ENSMAMG00000028144 #8	ENSMAMG00000005103	ENSMAMG00000005088	ENSMAMG00000005017	ENSMAMG00000005008	MGAT3 (ENSMAMG00000004980) #11	ENSMAMG00000004945 #12
Carangaria	ANCESTRAL SPECIES		ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00940000161265.e.b #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
Pleuronectoidei	ANCESTRAL SPECIES	26	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c.e #13
Tongue sole	MODERN SPECIES	19	ENSCSEG00000020854	LPAR2 (ENSCSEG00000020853)	ENSCSEG00000020852	ENSCSEG00000020850	akap8l (ENSCSEG00000020848)	ENSCSEG00000020847	b3galt10.2 (ENSCSEG00000020846)	ENSCSEG00000020845	ENSCSEG00000020844	vasna (ENSCSEG00000020843)	DNAJA3 (ENSCSEG00000020842)	pdgfaa (ENSCSEG00000020841)	cbx6a (ENSCSEG00000020840) #20	pla2g6 (ENSCSEG00000020839) #36	nptxrb (ENSCSEG00000020838)	dnal4b (ENSCSEG00000020837) #22	ENSCSEG00000020836	baiap2l2b (ENSCSEG00000020835) #37	pvalb7 (ENSCSEG00000020834)	ncf4 (ENSCSEG00000020833)	ENSCSEG00000020832 #15	ENSCSEG00000020831	ENSCSEG00000020830	MORN4 (ENSCSEG00000020829)	hoga1 (ENSCSEG00000020828)	CNNM1 (ENSCSEG00000020827)	ENSCSEG00000020826	GOT1 (ENSCSEG00000020824)	ENSCSEG00000020823	NKX2-3 (ENSCSEG00000020822)	slc25a28 (ENSCSEG00000020821)
Carangaria_A	ANCESTRAL SPECIES	14	ENSGT00940000163377.a.b.a	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
Seriola	ANCESTRAL SPECIES	18	ENSGT00940000163377.a.b.a	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c.e #13
Yellowtail amberjack	MODERN SPECIES	3206			LPAR2 (ENSSLDG00000012293)	ENSSLDG00000012280	ENSSLDG00000012267	akap8l (ENSSLDG00000012237)	ENSSLDG00000012222	b3galt10.2 (ENSSLDG00000012211)	ENSSLDG00000012196	vasna (ENSSLDG00000012190)	dnaja3b (ENSSLDG00000012155)	pdgfaa (ENSSLDG00000012109)	pla2g6 (ENSSLDG00000012073) #36	cbx6a (ENSSLDG00000012052) #20	nptxrb (ENSSLDG00000012034)	dnal4b (ENSSLDG00000012015) #22	ENSSLDG00000011981	baiap2l2b (ENSSLDG00000011943) #37	pvalb7 (ENSSLDG00000011923)	ncf4 (ENSSLDG00000011892)	ENSSLDG00000011873 #15	ENSSLDG00000011848 #23
Greater amberjack	MODERN SPECIES	13	ENSSDUG00000013744	LPAR2 (ENSSDUG00000013735)	ENSSDUG00000013694	akap8l (ENSSDUG00000013650)	ENSSDUG00000013641	GLIS2 (ENSSDUG00000013628)	b3galt10.2 (ENSSDUG00000013623)	ENSSDUG00000013619	vasna (ENSSDUG00000013613)	dnaja3b (ENSSDUG00000013564)	pdgfaa (ENSSDUG00000013548)	ENSSDUG00000013536	pla2g6 (ENSSDUG00000013485) #36	cbx6a (ENSSDUG00000013470) #20	nptxrb (ENSSDUG00000013453)	dnal4b (ENSSDUG00000013437) #22	ENSSDUG00000013417	baiap2l2b (ENSSDUG00000013387) #37	pvalb7 (ENSSDUG00000013374)	ncf4 (ENSSDUG00000013330)	ENSSDUG00000013294 #15	ENSSDUG00000013262 #23	atf4a (ENSSDUG00000013253) #9	ENSSDUG00000013242 #8	TST (ENSSDUG00000013233)	ENSSDUG00000013216	ENSSDUG00000013199	ENSSDUG00000013186	ENSSDUG00000013181
Barramundi perch	MODERN SPECIES	220	ENSLCAG00010027994	akap8l (ENSLCAG00010027993)	ENSLCAG00010027992	ENSLCAG00010027991	GLIS2 (ENSLCAG00010027990)	ENSLCAG00010027989	ENSLCAG00010027988	ENSLCAG00010027987	vasna (ENSLCAG00010027986)	dnaja3b (ENSLCAG00010027985)	PDGFA (ENSLCAG00010027984)	ENSLCAG00010027979	pla2g6 (ENSLCAG00010027978) #36	cbx6a (ENSLCAG00010027977) #20	nptxrb (ENSLCAG00010027976)	dnal4b (ENSLCAG00010027975) #22	ENSLCAG00010027974	ENSLCAG00010027972	baiap2l2b (ENSLCAG00010027971) #37	pvalb7 (ENSLCAG00010027970)	ncf4 (ENSLCAG00010027969)	ENSLCAG00010027968 #15	ENSLCAG00010027967 #23
Ovalentaria	ANCESTRAL SPECIES		ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104
Atherinomorphae	ANCESTRAL SPECIES	20	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00390000011272	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104
Oryzias	ANCESTRAL SPECIES	15	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000159318.n.b	ENSGT00390000011272	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104
Oryzias_a	ANCESTRAL SPECIES	26	ENSGT00940000160446	ENSGT00940000163377.a.b.a	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00390000011272	ENSGT00940000159039.b	ENSGT00940000169291.B.k	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12
Chinese medaka	MODERN SPECIES	271													ENSOSIG00000000576 #36	cbx6a (ENSOSIG00000000575) #20	nptxrb (ENSOSIG00000000570)	dnal4b (ENSOSIG00000000568) #22	ENSOSIG00000000516	baiap2l2b (ENSOSIG00000000505) #37	pvalb7 (ENSOSIG00000000502)	ncf4 (ENSOSIG00000000500)	ENSOSIG00000000499 #15	ENSOSIG00000000495 #23	atf4a (ENSOSIG00000000490) #9	ENSOSIG00000000487 #8	TST (ENSOSIG00000000485)	TMPRSS6 (ENSOSIG00000000458)	ENSOSIG00000000450	MGAT3 (ENSOSIG00000000448) #11	TAB1 (ENSOSIG00000000427) #12	SYNGR1 (ENSOSIG00000000418) #13	IFT27 (ENSOSIG00000000412)
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000010279	ENSORLG00000010296	ENSORLG00000010329	akap8l (ENSORLG00000010358)	ENSORLG00000022619	ENSORLG00000010364	VASN (ENSORLG00000010369)	dnaja3b (ENSORLG00000010385)	TMEM187 (ENSORLG00000029023)	pdgfaa (ENSORLG00000010411)	ENSORLG00000022251	pla2g6 (ENSORLG00000010438) #36	cbx6a (ENSORLG00000025101) #20	nptxrb (ENSORLG00000010495)	ENSORLG00000024436	dnal4b (ENSORLG00000026105) #22	ENSORLG00000010522	ENSORLG00000028590	baiap2l2b (ENSORLG00000010543) #37	pvalb7 (ENSORLG00000024281)	ncf4 (ENSORLG00000010611)	ENSORLG00000030121 #15	ENSORLG00000026252 #23	atf4a (ENSORLG00000024192) #9	ENSORLG00000023617	ENSORLG00000022355 #8	ENSORLG00000010676	ENSORLG00000026134	TMPRSS6 (ENSORLG00000010701)	ENSORLG00000021948	MGAT3 (ENSORLG00000010713) #11
Oryzias_b	ANCESTRAL SPECIES	21	ENSGT01050000244941.B.c.b.a	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000159318.n.b	ENSGT00390000011272	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000177132.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614
Indian medaka	MODERN SPECIES	35	ENSOMEG00000017402	ENSOMEG00000017374	ENSOMEG00000017347	ENSOMEG00000017326	ENSOMEG00000017304	ENSOMEG00000017269	ENSOMEG00000017246	ENSOMEG00000017229	ENSOMEG00000017203	ENSOMEG00000017179	ENSOMEG00000017160	ENSOMEG00000017111	pla2g6 (ENSOMEG00000017054) #36	cbx6a (ENSOMEG00000016946) #20	nptxrb (ENSOMEG00000016916)	dnal4b (ENSOMEG00000016877) #22	ENSOMEG00000016835	ENSOMEG00000016768	baiap2l2b (ENSOMEG00000016745) #37	pvalb7 (ENSOMEG00000016686)	ncf4 (ENSOMEG00000016655)	ENSOMEG00000016614 #15	ENSOMEG00000016564 #23	ENSOMEG00000016450	atf4a (ENSOMEG00000016436) #9	ENSOMEG00000016420	ENSOMEG00000016374 #8	ENSOMEG00000016362	ENSOMEG00000016345	TMPRSS6 (ENSOMEG00000016309)	ENSOMEG00000016265
Javanese ricefish	MODERN SPECIES		akap8l (ENSOJAG00000009550)	ENSOJAG00000009538	b3galt10.2 (ENSOJAG00000009517)	vasna (ENSOJAG00000009512)	TMEM187 (ENSOJAG00000009496)	dnaja3b (ENSOJAG00000009436)	PDGFA (ENSOJAG00000009421)	ENSOJAG00000009400	ENSOJAG00000009389	ENSOJAG00000009371	ENSOJAG00000009349	ENSOJAG00000009335	pla2g6 (ENSOJAG00000009031) #36	cbx6a (ENSOJAG00000008973) #20	nptxrb (ENSOJAG00000008837)	dnal4b (ENSOJAG00000008814) #22	ENSOJAG00000008198	baiap2l2b (ENSOJAG00000008120) #37	pvalb7 (ENSOJAG00000008101)	ncf4 (ENSOJAG00000007997)	ENSOJAG00000007962	ENSOJAG00000007956	ENSOJAG00000007946 #15	ENSOJAG00000007927 #23	ENSOJAG00000007900	atf4a (ENSOJAG00000007876) #9	ENSOJAG00000007859	ENSOJAG00000007850 #8	ENSOJAG00000007844	ENSOJAG00000007834	TMPRSS6 (ENSOJAG00000007763)
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00390000011272	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
Aplocheiloidei	ANCESTRAL SPECIES	17	ENSGT00950000182975.a.b.a.b	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00390000011272	ENSGT00940000159039.b	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00940000167693	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11
Mangrove rivulus	MODERN SPECIES		ENSKMAG00000010291	ENSKMAG00000010320	akap8l (ENSKMAG00000010390)	ENSKMAG00000010416	ENSKMAG00000010442	ENSKMAG00000010457	ENSKMAG00000010479	ENSKMAG00000010489	VASN (ENSKMAG00000010506)	dnaja3b (ENSKMAG00000010514)	TMEM187 (ENSKMAG00000010543)	pdgfaa (ENSKMAG00000010561)	pla2g6 (ENSKMAG00000010606) #36	cbx6a (ENSKMAG00000010710) #20	nptxrb (ENSKMAG00000010727)	dnal4b (ENSKMAG00000010764) #22	ENSKMAG00000010776	ENSKMAG00000010822	baiap2l2b (ENSKMAG00000010835) #37	pvalb7 (ENSKMAG00000010860)	ncf4 (ENSKMAG00000010883)	ENSKMAG00000010940 #15	ENSKMAG00000010964 #23	atf4a (ENSKMAG00000010988) #9	ENSKMAG00000010999 #8	TST (ENSKMAG00000011020)	ENSKMAG00000011026	TMPRSS6 (ENSKMAG00000011072)	ENSKMAG00000011193	MGAT3 (ENSKMAG00000011204) #11	TAB1 (ENSKMAG00000011241) #12
Turquoise killifish	MODERN SPECIES	1611	GPR83 (ENSNFUG00015000709)	ANKRD49 (ENSNFUG00015000702)	Nfu_g_1_018191 (ENSNFUG00015000697)	ZFP91 (ENSNFUG00015000683)	RBM47 (ENSNFUG00015000673)	APBB2 (ENSNFUG00015000632)	ENSNFUG00015000597	FAM184B (ENSNFUG00015000562)	ncapg (ENSNFUG00015000473)	ENSNFUG00015000436	ENSNFUG00015000431	ENSNFUG00015000423	ENSNFUG00015000414	pla2g6 (ENSNFUG00015000287) #36	Nfu_g_1_018275 (ENSNFUG00015005644)	DNAL4 (ENSNFUG00015005636) #22	ENSNFUG00015005598	ENSNFUG00015005433	baiap2l2b (ENSNFUG00015005401) #37	pvalb7 (ENSNFUG00015005386)	ncf4 (ENSNFUG00015005348)	ENSNFUG00015005338	ENSNFUG00015005328 #15	SUN5 (ENSNFUG00015005315) #23	atf4a (ENSNFUG00015005300) #9	ENSNFUG00015005294	CABZ01084579.1 (ENSNFUG00015005292) #8	ENSNFUG00015005285	TMPRSS6 (ENSNFUG00015005248)	CABZ01084570.1 (ENSNFUG00015005234)	MGAT3 (ENSNFUG00015005225) #11
Cyprinodontoidei	ANCESTRAL SPECIES	24	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b.t	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00390000011272	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11
NAME_4	ANCESTRAL SPECIES	69	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b.s	ENSGT00940000171070	ENSGT00940000164876.b.t	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00390000011272	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12	ENSGT00950000182935.B.b.c.e #13	ENSGT00870000136549
Sheepshead minnow	MODERN SPECIES	390	ENSCVAG00000006138	ENSCVAG00000006125	akap8l (ENSCVAG00000006088)	ENSCVAG00000006031	ENSCVAG00000005986	ENSCVAG00000005981	ENSCVAG00000005975	vasna (ENSCVAG00000005965)	TMEM187 (ENSCVAG00000005960)	dnaja3b (ENSCVAG00000005958)	PDGFA (ENSCVAG00000005915)	ENSCVAG00000005905	pla2g6 (ENSCVAG00000005899) #36	cbx6a (ENSCVAG00000005880) #20	nptxrb (ENSCVAG00000005867)	dnal4b (ENSCVAG00000005847) #22	ENSCVAG00000005832	baiap2l2b (ENSCVAG00000005805) #37	pvalb7 (ENSCVAG00000005767)	ncf4 (ENSCVAG00000005755)	ENSCVAG00000005752 #15	ENSCVAG00000005744 #23	atf4a (ENSCVAG00000005726) #9
Mummichog	MODERN SPECIES	353													pla2g6 (ENSFHEG00000010204) #36	cbx6a (ENSFHEG00000010219) #20	nptxrb (ENSFHEG00000000232)	dnal4b (ENSFHEG00000010233) #22	ENSFHEG00000010278	baiap2l2b (ENSFHEG00000010342) #37	pvalb7 (ENSFHEG00000010360)	ncf4 (ENSFHEG00000010370)	ENSFHEG00000010379 #15	ENSFHEG00000010393	atf4a (ENSFHEG00000010400) #9	ENSFHEG00000010413	ENSFHEG00000000238 #8	ENSFHEG00000010428
Poeciliinae	ANCESTRAL SPECIES	27	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b.t.a	ENSGT00940000164876.b.t.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00390000011272	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a.e	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364.b	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11
Poecilia	ANCESTRAL SPECIES	31	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00990000204268	ENSGT00940000158383.a	ENSGT00940000164876.b.t.a	ENSGT00940000164876.b.t.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00390000011272	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a.e	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364.b	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11
NAME_6	ANCESTRAL SPECIES	35											ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a.e	ENSGT01030000234599.a.b.d.b.b.a.f	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364.a	ENSGT00940000160104	ENSGT00940000167614
Amazon molly	MODERN SPECIES	653							ENSPFOG00000004607	dnaja3b (ENSPFOG00000004628)	TMEM187 (ENSPFOG00000020016)	ENSPFOG00000004827	pdgfaa (ENSPFOG00000004839)	ENSPFOG00000004890	pla2g6 (ENSPFOG00000004904) #36	cbx6a (ENSPFOG00000022826) #20	nptxrb (ENSPFOG00000005114)	dnal4b (ENSPFOG00000005206) #22	ENSPFOG00000005231	ENSPFOG00000005407	baiap2l2b (ENSPFOG00000005749) #37	pvalb7 (ENSPFOG00000005802)	ncf4 (ENSPFOG00000005848)	ENSPFOG00000006047 #15	ENSPFOG00000021866 #23	ENSPFOG00000024126	ENSPFOG00000006083	atf4a (ENSPFOG00000006088) #9	ENSPFOG00000006097	ENSPFOG00000006110	ENSPFOG00000006136 #8	ENSPFOG00000006150	ENSPFOG00000006163
Sailfin molly	MODERN SPECIES	77												ENSPLAG00000003568	pla2g6 (ENSPLAG00000000727) #36	cbx6a (ENSPLAG00000003548) #20	nptxrb (ENSPLAG00000003517)	dnal4b (ENSPLAG00000003500) #22	ENSPLAG00000003493	baiap2l2b (ENSPLAG00000003480) #37	pvalb7 (ENSPLAG00000000615)	ncf4 (ENSPLAG00000003460)	ENSPLAG00000003450 #15	ENSPLAG00000003446 #23	atf4a (ENSPLAG00000003439) #9	ENSPLAG00000003431 #8	ENSPLAG00000003426	TMPRSS6 (ENSPLAG00000003422)	ENSPLAG00000003405
Guppy	MODERN SPECIES	439	CAMSAP3 (ENSPREG00000000209)	ENSPREG00000000208	ENSPREG00000000207	akap8l (ENSPREG00000000206)	ENSPREG00000000205	ENSPREG00000000204	b3galt10.2 (ENSPREG00000000203)	ENSPREG00000000202	vasna (ENSPREG00000000201)	TMEM187 (ENSPREG00000000200)	dnaja3b (ENSPREG00000000199)	pdgfaa (ENSPREG00000000198)	pla2g6 (ENSPREG00000000197) #36	cbx6a (ENSPREG00000000196) #20	nptxrb (ENSPREG00000000195)	dnal4b (ENSPREG00000000194) #22	ENSPREG00000000193	ENSPREG00000000192	baiap2l2b (ENSPREG00000000191) #37	pvalb7 (ENSPREG00000000190)	ncf4 (ENSPREG00000000189)	ENSPREG00000000188 #15	ENSPREG00000000187 #23	atf4a (ENSPREG00000000186) #9	ENSPREG00000000185	ENSPREG00000000184 #8	ENSPREG00000000183	ENSPREG00000000182	TMPRSS6 (ENSPREG00000000181)	ENSPREG00000000180	TAB1 (ENSPREG00000000179) #12
Platyfish	MODERN SPECIES	19	ENSXMAG00000025096	ENSXMAG00000013838	akap8l (ENSXMAG00000013844)	ENSXMAG00000025607	ENSXMAG00000026778	ENSXMAG00000023976	ENSXMAG00000029827	vasna (ENSXMAG00000019734)	TMEM187 (ENSXMAG00000026278)	dnaja3b (ENSXMAG00000007950)	pdgfaa (ENSXMAG00000022003)	ENSXMAG00000027062	pla2g6 (ENSXMAG00000007966) #36	cbx6a (ENSXMAG00000007985) #20	nptxrb (ENSXMAG00000028262)	dnal4b (ENSXMAG00000026714) #22	ENSXMAG00000029522	ENSXMAG00000021383	baiap2l2b (ENSXMAG00000022078) #37	pvalb7 (ENSXMAG00000028043)	ncf4 (ENSXMAG00000008011)	ENSXMAG00000008034 #15	ENSXMAG00000029079 #23	atf4a (ENSXMAG00000008039) #9	ENSXMAG00000008040	ENSXMAG00000025297 #8	ENSXMAG00000008042	ENSXMAG00000008044	ENSXMAG00000028729	TMPRSS6 (ENSXMAG00000008048)	ENSXMAG00000029411
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00510000049239.a.d	ENSGT00940000160104
Pomacentridae	ANCESTRAL SPECIES	54	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00990000204268	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00940000178559	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614
Pomacentridae_A	ANCESTRAL SPECIES	49	ENSGT00980000198723	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00990000204268	ENSGT00940000169291.B	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12
Amphiprion	ANCESTRAL SPECIES	67	ENSGT01050000244941.B.c.b.a	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000158383.a	ENSGT00940000164876.b.j	ENSGT00940000164876.b.i	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00390000016774 #8	ENSGT00510000046773.a.b.c.b	ENSGT00900000142364	ENSGT00940000160104.m	ENSGT00940000167614	ENSGT00390000008221.a #11	ENSGT00510000048276 #12
Clown anemonefish	MODERN SPECIES	3328										dnaja3b (ENSAOCG00000009573)	PDGFA (ENSAOCG00000009606)	ENSAOCG00000009636	pla2g6 (ENSAOCG00000009679) #36	cbx6a (ENSAOCG00000009696) #20	nptxrb (ENSAOCG00000009708)	dnal4b (ENSAOCG00000009743) #22	ENSAOCG00000009771	baiap2l2b (ENSAOCG00000009841) #37	pvalb7 (ENSAOCG00000009875)	ncf4 (ENSAOCG00000009890)	ENSAOCG00000009918	bend5 (ENSAOCG00000009968)	ENSAOCG00000009985	spata6 (ENSAOCG00000010028)
Orange clownfish	MODERN SPECIES	17	LPAR2 (ENSAPEG00000009638)	ENSAPEG00000009593	akap8l (ENSAPEG00000009544)	GLIS2 (ENSAPEG00000009532)	ENSAPEG00000009524	ENSAPEG00000009518	ENSAPEG00000009512	vasna (ENSAPEG00000009487)	ENSAPEG00000009451	dnaja3b (ENSAPEG00000009391)	pdgfaa (ENSAPEG00000009348)	ENSAPEG00000009315	pla2g6 (ENSAPEG00000009281) #36	cbx6a (ENSAPEG00000009256) #20	nptxrb (ENSAPEG00000009247)	dnal4b (ENSAPEG00000009226) #22	ENSAPEG00000009055	baiap2l2b (ENSAPEG00000008993) #37	pvalb7 (ENSAPEG00000008967)	ncf4 (ENSAPEG00000008950)	ENSAPEG00000008937	ENSAPEG00000008912 #15	ENSAPEG00000008876 #23	atf4a (ENSAPEG00000008855) #9	ENSAPEG00000008847	ENSAPEG00000008838 #8	ENSAPEG00000008830	ENSAPEG00000008817	TMPRSS6 (ENSAPEG00000008788)	ENSAPEG00000008730	MGAT3 (ENSAPEG00000008688) #11
Spiny chromis	MODERN SPECIES	1345													pla2g6 (ENSAPOG00000013378) #36	cbx6a (ENSAPOG00000013333) #20	nptxrb (ENSAPOG00000013319)	dnal4b (ENSAPOG00000013310) #22	ENSAPOG00000013298	baiap2l2b (ENSAPOG00000013254) #37	pvalb7 (ENSAPOG00000013239)	ncf4 (ENSAPOG00000013226)
Bicolor damselfish	MODERN SPECIES	1341													pla2g6 (ENSSPAG00000016357) #36	cbx6a (ENSSPAG00000016409) #20	nptxrb (ENSSPAG00000016425)	dnal4b (ENSSPAG00000016453) #22	ENSSPAG00000016468	ENSSPAG00000016497	baiap2l2b (ENSSPAG00000016507) #37	pvalb7 (ENSSPAG00000016534)	ncf4 (ENSSPAG00000016547)
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00900000142364	ENSGT00510000046773.a.b.c.b	ENSGT00940000174815	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00940000177865	ENSGT00940000162790.a.u.a	ENSGT00530000063777.a.a.a	ENSGT00940000169291.A	ENSGT00940000158383.a	ENSGT00940000164876.b	ENSGT00940000163421.a.c	ENSGT00940000159318.n.b	ENSGT00940000155280.e	ENSGT00940000159039.b	ENSGT00940000169291.B	ENSGT00990000204268	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00900000142364	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774 #8	ENSGT00510000049239.a.d	ENSGT00940000160104	ENSGT00940000167614
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	33											ENSGT01060000248591.a.a.a.b.b	ENSGT00940000166105	ENSGT00990000204268.e	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00900000142364	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774 #8	ENSGT00940000160104	ENSGT00940000167614	ENSGT00390000008221.a #11
Lyretail cichlid	MODERN SPECIES	399														ENSNBRG00000012645 #36	cbx6a (ENSNBRG00000012623) #20	dnal4b (ENSNBRG00000012616) #22	ENSNBRG00000012596	baiap2l2b (ENSNBRG00000012551) #37	pvalb7 (ENSNBRG00000012532)	ncf4 (ENSNBRG00000012508)	ENSNBRG00000012478 #15	atf4a (ENSNBRG00000012463) #9	ENSNBRG00000012445	TMPRSS6 (ENSNBRG00000012406)	ENSNBRG00000012398	MGAT3 (ENSNBRG00000012357) #11	TAB1 (ENSNBRG00000012338) #12	SYNGR1 (ENSNBRG00000012319) #13	IFT27 (ENSNBRG00000012302)	CACNG2 (ENSNBRG00000012282)	ENSNBRG00000012266
Haplochromini	ANCESTRAL SPECIES	45											ENSGT00990000204268.e.a	ENSGT00940000158756 #36	ENSGT00940000154405.a.a #20	ENSGT00940000166105	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00940000167693	ENSGT00940000153560.b.b.b.h #37	ENSGT00940000159653.g.b	ENSGT00510000048561	ENSGT00940000157367.a.b #15	ENSGT00940000160024 #23	ENSGT00530000063801.a.a #9	ENSGT01030000234599.a.b.d.b.b.a	ENSGT00900000142364.d	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774 #8	ENSGT00900000142364.c.a	ENSGT00940000160104	ENSGT00940000167614
Burton s mouthbrooder	MODERN SPECIES	536													ENSHBUG00000005926 #36	ENSHBUG00000005945	nptxrb (ENSHBUG00000005981)	dnal4b (ENSHBUG00000005991) #22	ENSHBUG00000006016	baiap2l2b (ENSHBUG00000006058) #37	pvalb7 (ENSHBUG00000006080)	ncf4 (ENSHBUG00000006117)	ENSHBUG00000006148 #15	ENSHBUG00000006164 #23	atf4a (ENSHBUG00000006190) #9	ENSHBUG00000000156	ENSHBUG00000006201	ENSHBUG00000006220	ENSHBUG00000006231	ENSHBUG00000006236 #8	TMPRSS6 (ENSHBUG00000006271)	ENSHBUG00000006288	MGAT3 (ENSHBUG00000006316) #11
Nile tilapia	MODERN SPECIES	18	ENSONIG00000003813	ENSONIG00000003812	ENSONIG00000029598	ENSONIG00000003811	vasna (ENSONIG00000021320)	dnaja3b (ENSONIG00000003809)	pdgfaa (ENSONIG00000003807)	ENSONIG00000034300	ENSONIG00000036952	ENSONIG00000041074	ENSONIG00000033309	ENSONIG00000029017	pla2g6 (ENSONIG00000013107) #36	cbx6a (ENSONIG00000040455) #20	nptxrb (ENSONIG00000013104)	dnal4b (ENSONIG00000035286) #22	ENSONIG00000013098	baiap2l2b (ENSONIG00000038795) #37	pvalb7 (ENSONIG00000013097)	ncf4 (ENSONIG00000013093)	ENSONIG00000038264 #15	ENSONIG00000039729 #23	ENSONIG00000036362	ENSONIG00000013091	ENSONIG00000013090	TST (ENSONIG00000013088)	rps19bp1 (ENSONIG00000041237) #8	ENSONIG00000035891	ENSONIG00000037456	ENSONIG00000034754	TMPRSS6 (ENSONIG00000013831)
Midas cichlid	MODERN SPECIES	1653													pla2g6 (ENSACIG00000003684) #36	cbx6a (ENSACIG00000003935) #20	nptxrb (ENSACIG00000004003)	dnal4b (ENSACIG00000004030) #22	ENSACIG00000004044	ENSACIG00000004091	baiap2l2b (ENSACIG00000004105) #37	pvalb7 (ENSACIG00000004136)	ncf4 (ENSACIG00000004155)	ENSACIG00000004354 #15	atf4a (ENSACIG00000004363) #9	ENSACIG00000004381	ENSACIG00000004391	ENSACIG00000004410	ENSACIG00000004514	MGAT3 (ENSACIG00000004527) #11	TAB1 (ENSACIG00000004538) #12	SYNGR1 (ENSACIG00000004563) #13	ENSACIG00000004578
Pinecone sodierfish	MODERN SPECIES		vps37a (ENSMMDG00005005061)	mtmr7b (ENSMMDG00005003599)	ENSMMDG00005003567	ENSMMDG00005003564	patl1 (ENSMMDG00005003553)	ENSMMDG00005003547	ENSMMDG00005003545	ENSMMDG00005003542	ENSMMDG00005003541	cetp (ENSMMDG00005003537)	ENSMMDG00005003156	ENSMMDG00005003115	pla2g6 (ENSMMDG00005002512) #36	cbx6a (ENSMMDG00005002478) #20	nptxrb (ENSMMDG00005002470)	dnal4b (ENSMMDG00005002463) #22	ENSMMDG00005002440	pvalb7 (ENSMMDG00005002429)	ncf4 (ENSMMDG00005002391)	ENSMMDG00005002386 #15	ENSMMDG00005002383 #23	ENSMMDG00005002379	atf4a (ENSMMDG00005002376) #9	ENSMMDG00005002375	ENSMMDG00005002373 #8	TST (ENSMMDG00005002370)	TMPRSS6 (ENSMMDG00005002365)	ENSMMDG00005002364	ENSMMDG00005002363	MGAT3 (ENSMMDG00005002357) #11	TAB1 (ENSMMDG00005002355) #12
Cod	MODERN SPECIES	16	ENSGMOG00000002101	ENSGMOG00000022364	doc2d (ENSGMOG00000003329)	serping1 (ENSGMOG00000013214)	ENSGMOG00000013221	ENSGMOG00000013226	ENSGMOG00000013238	ENSGMOG00000018303	ENSGMOG00000031164	ENSGMOG00000035309	ENSGMOG00000014815	ENSGMOG00000014802	ENSGMOG00000009802 #36	ENSGMOG00000028484 #20	nptxrb (ENSGMOG00000032042)	ENSGMOG00000025548 #22	ENSGMOG00000009717	ENSGMOG00000009712	ENSGMOG00000009669	ENSGMOG00000009754 #15	ENSGMOG00000022935 #23	ENSGMOG00000035376	ENSGMOG00000036296	ENSGMOG00000025336	ENSGMOG00000009476	ENSGMOG00000009456	ENSGMOG00000009442	ENSGMOG00000026676	ENSGMOG00000025550	ENSGMOG00000025173	keap1b (ENSGMOG00000017172)
Otomorpha	ANCESTRAL SPECIES	690															ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a
Otophysi	ANCESTRAL SPECIES	71	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00530000063402.b	ENSGT00390000001057	ENSGT00940000158672.d	ENSGT00940000154784.D.a.a.b.a.a	ENSGT00940000154784.D.b.c.a	ENSGT00940000154784.D.a.a.a	ENSGT00940000158246	ENSGT00940000158015.k.b	ENSGT00520000059926	ENSGT00390000001146	ENSGT00390000000549	ENSGT00390000009679	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00990000204053
Characiphysae	ANCESTRAL SPECIES	78	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00530000063402.b	ENSGT00390000001057	ENSGT00940000158672.d	ENSGT00940000154784.D.a.a.b.a.a	ENSGT00940000154784.D.b.c.a	ENSGT00940000154784.D.a.a.a	ENSGT00940000158246	ENSGT00940000158015.k.b	ENSGT00520000059926	ENSGT00390000001146	ENSGT00390000000549	ENSGT00390000009679	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00990000204053.a
Channel catfish	MODERN SPECIES	19	capn1b (ENSIPUG00000012379)	mrps28 (ENSIPUG00000012566)	capn2b (ENSIPUG00000012590)	ENSIPUG00000012721	capn8 (ENSIPUG00000012755)	ENSIPUG00000012936	ENSIPUG00000012990	ENSIPUG00000013018	ENSIPUG00000013100	aars2 (ENSIPUG00000013115)	ENSIPUG00000013148	CSRP2BP (ENSIPUG00000013190)	dzank1 (ENSIPUG00000013320)	polr3f (ENSIPUG00000013347)	nptxrb (ENSIPUG00000013419)	dnal4 (ENSIPUG00000013432) #22	ENSIPUG00000013450	ENSIPUG00000013476	ENSIPUG00000013492	ENSIPUG00000013543	rnd3a (ENSIPUG00000013558)	ENSIPUG00000013629	ZRANB3 (ENSIPUG00000013812)	ccnt2 (ENSIPUG00000013854)	TMEM163 (ENSIPUG00000013885)	mgat5 (ENSIPUG00000013903)	PTH2R (ENSIPUG00000013939)	mrasb (ENSIPUG00000013954)	ptpn4b (ENSIPUG00000014002)	ppef1 (ENSIPUG00000014163)	xlrs1 (ENSIPUG00000014227)
Characiphysae_b	ANCESTRAL SPECIES	178	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00530000063402.b	ENSGT00390000001057	ENSGT00940000158672.d	ENSGT00940000154784.D.a.a.b.a.a	ENSGT00940000154784.D.b.c.a	ENSGT00940000154784.D.a.a.a	ENSGT00940000158246	ENSGT00940000158015.k.b	ENSGT00520000059926	ENSGT00390000001146	ENSGT00390000000549	ENSGT00390000009679	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00990000204053.a
Electric eel	MODERN SPECIES	264	ENSEEEG00000024477	yju2b (ENSEEEG00000024475)	PSPN (ENSEEEG00000024473)	wdr83 (ENSEEEG00000024472)	sde2 (ENSEEEG00000024471)	mrps28 (ENSEEEG00000024469)	capn1b (ENSEEEG00000024427)	capn2b (ENSEEEG00000024416)	capn8 (ENSEEEG00000024378)	AARS2 (ENSEEEG00000024362)	rrbp1b (ENSEEEG00000024361)	kat14 (ENSEEEG00000024360)	dzank1 (ENSEEEG00000024359)	polr3f (ENSEEEG00000024357)	nptxrb (ENSEEEG00000024356)	DNAL4 (ENSEEEG00000024355) #22	ENSEEEG00000024354	ENSEEEG00000024353	ENSEEEG00000024352
Characoidei	ANCESTRAL SPECIES	213	ENSGT00940000159016	ENSGT00530000063402.b	ENSGT00390000001057	ENSGT00940000158672.d	ENSGT00940000154784.D.a.a.b.a.a	ENSGT00940000154784.D.b.d	ENSGT00940000154784.D.b.c.a	ENSGT00940000154784.D.a.a.a	ENSGT00940000158246	ENSGT00940000158015.k.b	ENSGT00520000059926	ENSGT00390000001146	ENSGT00390000000549	ENSGT00390000009679	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f #22	ENSGT00950000182951.A.a.b.a	ENSGT00990000204053.a
Red-bellied piranha	MODERN SPECIES	211	ENSPNAG00000027078	ENSPNAG00000027099	ENSPNAG00000004174	ENSPNAG00000005725	ENSPNAG00000027167	ENSPNAG00000027189	capn8 (ENSPNAG00000027212)	capn2l (ENSPNAG00000027227)	AARS2 (ENSPNAG00000027249)	rrbp1b (ENSPNAG00000005309)	ENSPNAG00000004208	kat14 (ENSPNAG00000027352)	dzank1 (ENSPNAG00000006271)	polr3f (ENSPNAG00000005164)	nptxrb (ENSPNAG00000027408)	DNAL4 (ENSPNAG00000004232) #22	ENSPNAG00000006915	ENSPNAG00000027478	ENSPNAG00000005522	ENSPNAG00000006778	ENSPNAG00000005310	ENSPNAG00000027534
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	3	ENSECRG00000014429	ENSECRG00000014404	ENSECRG00000014372	ENSECRG00000014351	ENSECRG00000010164	ENSECRG00000010161	ENSECRG00000010155	ENSECRG00000010146	CBX7 (ENSECRG00000010137) #16	ENSECRG00000010129	ENSECRG00000010122	cbx6a (ENSECRG00000010111) #20	ENSECRG00000010099	nptxrb (ENSECRG00000010085)	ENSECRG00000010076	DNAL4 (ENSECRG00000010066) #22	ENSECRG00000010048	ENSECRG00000010039	ENSECRG00000010029	ENSECRG00000010019	ENSECRG00000010014	ENSECRG00000010009	ENSECRG00000010001	ENSECRG00000009995	ENSECRG00000009989	ENSECRG00000009956	pla2g6 (ENSECRG00000009927) #36	ENSECRG00000009915	PVALB (ENSECRG00000009903)	ncf4 (ENSECRG00000009892)	ENSECRG00000009873
Reedfish	MODERN SPECIES	494						ENSECRG00000017119	ENSECRG00000017075	ENSECRG00000017057	ift57 (ENSECRG00000016964)	KCNQ3 (ENSECRG00000016789)	dnaaf11 (ENSECRG00000016184)	TMEM71 (ENSECRG00000016126)	ift57 (ENSECRG00000016104)	ENSECRG00000016056	ENSECRG00000016021	ENSECRG00000016001 #22	ift57 (ENSECRG00000015924)	ENSECRG00000014414	slc39a6 (ENSECRG00000014251)	egfra (ENSECRG00000014172)	rnf182 (ENSECRG00000014139)	zgc:165532 (ENSECRG00000014109)	ranbp9 (ENSECRG00000013907)	NOL7 (ENSECRG00000013834)	sirt5 (ENSECRG00000013809)	ENSECRG00000013790