Glires	ANCESTRAL SPECIES	1	ENSGT00410000028070	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163628	ENSGT00940000163542	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT01050000245471	ENSGT00390000005623	ENSGT00940000155891
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00940000163628	ENSGT00940000163542	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00390000001698	ENSGT00940000156257	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692
Pika	MODERN SPECIES	6509																BDNF (ENSOPRG00000003161) #22
Rabbit	MODERN SPECIES		ENSOCUG00000033792	ENSOCUG00000031206	ENSOCUG00000029350	RCN1 (ENSOCUG00000016268)	PAX6 (ENSOCUG00000011075)	ELP4 (ENSOCUG00000001925)	IMMP1L (ENSOCUG00000029612)	DNAJC24 (ENSOCUG00000027642)	DCDC1 (ENSOCUG00000016555)	MPPED2 (ENSOCUG00000004904)	ARL14EP (ENSOCUG00000027628)	FSHB (ENSOCUG00000021932)	KCNA4 (ENSOCUG00000014475)	METTL15 (ENSOCUG00000014291)	KIF18A (ENSOCUG00000013950)	BDNF (ENSOCUG00000006731) #22	LIN7C (ENSOCUG00000004075)	LGR4 (ENSOCUG00000004061)	CCDC34 (ENSOCUG00000004054)	ENSOCUG00000037126	BBOX1 (ENSOCUG00000006085)	FIBIN (ENSOCUG00000011624)	ENSOCUG00000033310	SLC5A12 (ENSOCUG00000017618)	MUC15 (ENSOCUG00000021120)	ANO3 (ENSOCUG00000017882)	LUZP2 (ENSOCUG00000026462)	ENSOCUG00000028087	ENSOCUG00000012580	CCDC179 (ENSOCUG00000036512)	ENSOCUG00000036117
Rodentia	ANCESTRAL SPECIES	1	ENSGT01010000222360.D.b	ENSGT00410000028070	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT01050000245471	ENSGT00390000005623	ENSGT00940000155891
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT01050000245471	ENSGT00390000005623	ENSGT00940000155891
Hystricomorpha	ANCESTRAL SPECIES	50	ENSGT00940000160004	ENSGT00390000013482	ENSGT00390000004456	ENSGT00940000156734	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756.i	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT01050000245471	ENSGT00390000005623	ENSGT00940000155891
Hystricomorpha_a	ANCESTRAL SPECIES	57	ENSGT00940000160004	ENSGT00390000013482	ENSGT00390000004456	ENSGT00940000156734	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756.i	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT01050000245471	ENSGT00390000005623	ENSGT00940000155891
Hystricomorpha_b	ANCESTRAL SPECIES	69	ENSGT00940000160004	ENSGT00390000013482	ENSGT00390000004456	ENSGT00940000156734	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756.i	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00390000001698	ENSGT00940000156257	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT01050000245471	ENSGT00390000005623	ENSGT00940000155891
Long-tailed chinchilla	MODERN SPECIES	183	DUSP8 (ENSCLAG00000001311)	CCDC73 (ENSCLAG00000001450)	EIF3M (ENSCLAG00000001396)	WT1 (ENSCLAG00000001374)	RCN1 (ENSCLAG00000001362)	PAX6 (ENSCLAG00000001303)	ELP4 (ENSCLAG00000001270)	IMMP1L (ENSCLAG00000001244)	DNAJC24 (ENSCLAG00000001222)	MPPED2 (ENSCLAG00000001209)	ARL14EP (ENSCLAG00000001182)	FSHB (ENSCLAG00000001148)	KCNA4 (ENSCLAG00000017433)	METTL15 (ENSCLAG00000001125)	KIF18A (ENSCLAG00000001083)	BDNF (ENSCLAG00000001053) #22	LIN7C (ENSCLAG00000001942)	LGR4 (ENSCLAG00000003211)	CCDC34 (ENSCLAG00000003164)	BBOX1 (ENSCLAG00000003118)	FIBIN (ENSCLAG00000003084)	SLC5A12 (ENSCLAG00000003002)	MUC15 (ENSCLAG00000002945)	ANO3 (ENSCLAG00000002919)	LUZP2 (ENSCLAG00000002837)	CCDC179 (ENSCLAG00000002769)	ENSCLAG00000002736	GAS2 (ENSCLAG00000002702)	FANCF (ENSCLAG00000002545)	SLC17A6 (ENSCLAG00000002517)	ANO5 (ENSCLAG00000002451)
Degu	MODERN SPECIES	234										MPPED2 (ENSODEG00000001654)	ENSODEG00000001669	Fshb (ENSODEG00000001696)	KCNA4 (ENSODEG00000018747)	METTL15 (ENSODEG00000001716)	KIF18A (ENSODEG00000001736)	BDNF (ENSODEG00000001764) #22	LIN7C (ENSODEG00000001778)	LGR4 (ENSODEG00000001812)	CCDC34 (ENSODEG00000001867)	BBOX1 (ENSODEG00000001899)	FIBIN (ENSODEG00000001946)	SLC5A12 (ENSODEG00000002001)	ANO3 (ENSODEG00000002166)	MUC15 (ENSODEG00000002264)
Guinea pig	MODERN SPECIES	74														METTL15 (ENSCPOG00000039400)	KIF18A (ENSCPOG00000027174)	BDNF (ENSCPOG00000009920) #22	LIN7C (ENSCPOG00000015497)	ENSCPOG00000040182	CCDC34 (ENSCPOG00000033866)	BBOX1 (ENSCPOG00000004534)	FIBIN (ENSCPOG00000009331)	SLC5A12 (ENSCPOG00000009481)	ANO3 (ENSCPOG00000005576)	MUC15 (ENSCPOG00000005582)	ENSCPOG00000031214	CCDC179 (ENSCPOG00000038407)	SVIP (ENSCPOG00000036943)	GAS2 (ENSCPOG00000015191)	FANCF (ENSCPOG00000004340)	ENSCPOG00000021891	SLC17A6 (ENSCPOG00000013403)
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000048619	WT1 (ENSHGLG00000004253)	RCN1 (ENSHGLG00000004070)	PAX6 (ENSHGLG00000010889)	ELP4 (ENSHGLG00000009198)	ENSHGLG00000040580	IMMP1L (ENSHGLG00000008856)	DNAJC24 (ENSHGLG00000008508)	MPPED2 (ENSHGLG00000008458)	ARL14EP (ENSHGLG00000008363)	FSHB (ENSHGLG00000043984)	KCNA4 (ENSHGLG00000011830)	METTL15 (ENSHGLG00000038346)	KIF18A (ENSHGLG00000010300)	ENSHGLG00000037469	BDNF (ENSHGLG00000008332) #22	ENSHGLG00000032654	LIN7C (ENSHGLG00000013510)	LGR4 (ENSHGLG00000010222)	CCDC34 (ENSHGLG00000009130)	BBOX1 (ENSHGLG00000007781)	ENSHGLG00000050412	FIBIN (ENSHGLG00000048355)	SLC5A12 (ENSHGLG00000006386)	ANO3 (ENSHGLG00000004752)	MUC15 (ENSHGLG00000004980)	LUZP2 (ENSHGLG00000007694)	CCDC179 (ENSHGLG00000049825)	SVIP (ENSHGLG00000045445)	GAS2 (ENSHGLG00000005611)	FANCF (ENSHGLG00000005261)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692
Marmotini	ANCESTRAL SPECIES	22	ENSGT00730000111983	ENSGT01010000222360.D.b.j.b	ENSGT01010000222360.D.b.j.a	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a.f	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00730000111983	ENSGT01010000222360.D.b.j.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000166413	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a.f	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692
Arctic ground squirrel	MODERN SPECIES	531														ENSUPAG00010012646	KIF18A (ENSUPAG00010012653)	BDNF (ENSUPAG00010012685) #22	LIN7C (ENSUPAG00010012703)	LGR4 (ENSUPAG00010012713)	CCDC34 (ENSUPAG00010012768)	BBOX1 (ENSUPAG00010012779)
Squirrel	MODERN SPECIES	140	RNF7 (ENSSTOG00000014964)	Grk7 (ENSSTOG00000021157)	ENSSTOG00000013235	TFDP2 (ENSSTOG00000013241)	GK5 (ENSSTOG00000013540)	XRN1 (ENSSTOG00000013552)	ATR (ENSSTOG00000021792)	ENSSTOG00000034418	PLS1 (ENSSTOG00000009305)	TRPC1 (ENSSTOG00000024889)	PCOLCE2 (ENSSTOG00000015983)	PAQR9 (ENSSTOG00000028103)	U2SURP (ENSSTOG00000015997)	CHST2 (ENSSTOG00000022233)	SLC9A9 (ENSSTOG00000016009)	BDNF (ENSSTOG00000009446) #22	LIN7C (ENSSTOG00000008941)	LGR4 (ENSSTOG00000021020)	CCDC34 (ENSSTOG00000033444)	BBOX1 (ENSSTOG00000015028)	ENSSTOG00000011160	SLC5A12 (ENSSTOG00000012602)	ANO3 (ENSSTOG00000012581)	ENSSTOG00000012593	LUZP2 (ENSSTOG00000013906)
Alpin marmot	MODERN SPECIES	3	WT1 (ENSMMMG00000007507)	ENSMMMG00000007498	ENSMMMG00000007458	PAX6 (ENSMMMG00000007169)	ELP4 (ENSMMMG00000007140)	IMMP1L (ENSMMMG00000007121)	ENSMMMG00000007114	ENSMMMG00000007096	ENSMMMG00000007066	MPPED2 (ENSMMMG00000007054)	ARL14EP (ENSMMMG00000007044)	FSHB (ENSMMMG00000007033)	KCNA4 (ENSMMMG00000006997)	METTL15 (ENSMMMG00000006976)	KIF18A (ENSMMMG00000006947)	BDNF (ENSMMMG00000006928) #22	ENSMMMG00000006917	LGR4 (ENSMMMG00000006845)	CCDC34 (ENSMMMG00000006837)	BBOX1 (ENSMMMG00000006822)	FIBIN (ENSMMMG00000006818)	SLC5A12 (ENSMMMG00000006771)	MUC15 (ENSMMMG00000006760)	ANO3 (ENSMMMG00000006718)	ENSMMMG00000006692	LUZP2 (ENSMMMG00000006650)	CCDC179 (ENSMMMG00000006624)	SVIP (ENSMMMG00000006618)	GAS2 (ENSMMMG00000006596)	FANCF (ENSMMMG00000006591)	SLC17A6 (ENSMMMG00000006549)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005006612	ENSSVLG00005006643	PAX6 (ENSSVLG00005006723)	ELP4 (ENSSVLG00005007005)	IMMP1L (ENSSVLG00005007051)	DNAJC24 (ENSSVLG00005007079)	DCDC1 (ENSSVLG00005007148)	ENSSVLG00005007367	MPPED2 (ENSSVLG00005007385)	ARL14EP (ENSSVLG00005007404)	FSHB (ENSSVLG00005007418)	KCNA4 (ENSSVLG00005007441)	METTL15 (ENSSVLG00005007460)	ENSSVLG00005007473	KIF18A (ENSSVLG00005007495)	BDNF (ENSSVLG00005007577) #22	ENSSVLG00005007614	LGR4 (ENSSVLG00005007742)	CCDC34 (ENSSVLG00005007991)	BBOX1 (ENSSVLG00005008054)	FIBIN (ENSSVLG00005008102)	SLC5A12 (ENSSVLG00005008125)	ANO3 (ENSSVLG00005008291)	MUC15 (ENSSVLG00005008866)	LUZP2 (ENSSVLG00005008944)	ENSSVLG00005009036	CCDC179 (ENSSVLG00005009068)	SVIP (ENSSVLG00005009105)	GAS2 (ENSSVLG00005009154)	FANCF (ENSSVLG00005009225)	SLC17A6 (ENSSVLG00005009243)
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT01010000222360.D.b	ENSGT00410000028070	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00390000013180	ENSGT00660000097475	ENSGT00390000007067	ENSGT00940000155755	ENSGT00390000005623	ENSGT00940000155891	ENSGT00940000155692
Kangaroo rat	MODERN SPECIES	365	Wt1 (ENSDORG00000013725)	Them7 (ENSDORG00000029154)	Rcn1 (ENSDORG00000006013)	ENSDORG00000025302	Pax6 (ENSDORG00000000254)	Elp4 (ENSDORG00000000252)	Immp1l (ENSDORG00000000250)	ENSDORG00000000248	Mpped2 (ENSDORG00000030055)	Arl14ep (ENSDORG00000010212)	ENSDORG00000029216	Fshb (ENSDORG00000014836)	Kcna4 (ENSDORG00000027145)	ENSDORG00000001580	Kif18a (ENSDORG00000010978)	Bdnf (ENSDORG00000026120) #22	Lin7c (ENSDORG00000024849)	Lgr4 (ENSDORG00000003213)	ENSDORG00000006760	Bbox1 (ENSDORG00000009197)	Fibin (ENSDORG00000010514)	ENSDORG00000023397	ENSDORG00000002796	Muc15 (ENSDORG00000023623)	Ano3 (ENSDORG00000002793)	Luzp2 (ENSDORG00000016225)	ENSDORG00000026793	Svip (ENSDORG00000028303)	Gas2 (ENSDORG00000007788)	Fancf (ENSDORG00000026794)	Slc17a6 (ENSDORG00000004770)
Myomorpha	ANCESTRAL SPECIES	4	ENSGT01010000222360.D.b	ENSGT00410000028070	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698
Muroidea	ANCESTRAL SPECIES	2	ENSGT01010000222360.D.b	ENSGT00410000028070	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00940000160602	ENSGT00940000163550	ENSGT00940000162713.a	ENSGT00940000162052	ENSGT00940000163920	ENSGT00940000162706	ENSGT00940000162683
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00940000163542	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00940000164460	ENSGT01030000234574.A.b.b	ENSGT00410000025793.a	ENSGT00390000012563.n	ENSGT00940000160238	ENSGT00390000006970	ENSGT01060000248825
Murinae	ANCESTRAL SPECIES	1	ENSGT00390000004456	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00940000163542	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00940000161777.a.a	ENSGT00940000160602.t	ENSGT00940000160602.s.c	ENSGT00940000163550	ENSGT00940000160602.s.d	ENSGT00940000162713.a.s	ENSGT00940000162052.z
Mus	ANCESTRAL SPECIES	1	ENSGT00390000013482	ENSGT00390000004456	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT01100000266944	ENSGT00940000161777.a.a	ENSGT00940000160602.t	ENSGT00940000160602.s.c	ENSGT00940000163550	ENSGT00940000160602.s.d	ENSGT00940000162713.a.s
Mus_A	ANCESTRAL SPECIES		ENSGT00390000013482	ENSGT00390000004456	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00860000135621	ENSGT01100000266944	ENSGT00940000161777.a.a	ENSGT00940000160602.t	ENSGT00940000160602.s.c	ENSGT00940000163550	ENSGT00940000160602.s.d
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000013482	ENSGT00390000004456	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00860000135621	ENSGT01100000266944	ENSGT00940000161777.a.a	ENSGT00940000160602.t	ENSGT00940000160602.s.c	ENSGT00940000163550	ENSGT00940000160602.s.d
Mouse	MODERN SPECIES	11	Ccdc73 (ENSMUSG00000045106)	Eif3m (ENSMUSG00000027170)	Wt1 (ENSMUSG00000016458)	Them7 (ENSMUSG00000055312)	Rcn1 (ENSMUSG00000005973)	Pax6 (ENSMUSG00000027168)	Elp4 (ENSMUSG00000027167)	Immp1l (ENSMUSG00000042670)	Dnajc24 (ENSMUSG00000027166)	Mpped2 (ENSMUSG00000016386)	Arl14ep (ENSMUSG00000027122)	Fshb (ENSMUSG00000027120)	Kcna4 (ENSMUSG00000042604)	Mettl15 (ENSMUSG00000057234)	Kif18a (ENSMUSG00000027115)	Bdnf (ENSMUSG00000048482) #22	Lin7c (ENSMUSG00000027162)	Lgr4 (ENSMUSG00000050199)	Ccdc34 (ENSMUSG00000027160)	Bbox1 (ENSMUSG00000041660)	Fibin (ENSMUSG00000074971)	Slc5a12 (ENSMUSG00000041644)	Ano3 (ENSMUSG00000074968)	Muc15 (ENSMUSG00000050808)	Potefam1 (ENSMUSG00000027157)	Or4f52 (ENSMUSG00000074966)	Or4f53 (ENSMUSG00000063844)	Or4k35 (ENSMUSG00000074965)	Or4f54 (ENSMUSG00000068647)	Or4g16 (ENSMUSG00000109813)	Or4k36 (ENSMUSG00000109449)
Mus_C	ANCESTRAL SPECIES		ENSGT00390000013482	ENSGT00390000004456	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00860000135621	ENSGT01100000266944	ENSGT00940000161777.a.a	ENSGT00940000160602.t	ENSGT00940000160602.s.c	ENSGT00940000163550	ENSGT00940000160602.s.d
Steppe mouse	MODERN SPECIES	23													Mettl15 (ENSMSIG00000028975)	Kif18a (ENSMSIG00000028985)	ENSMSIG00000029001	Bdnf (ENSMSIG00000029005) #22	Lin7c (ENSMSIG00000029014)	Lgr4 (ENSMSIG00000029024)	Ccdc34 (ENSMSIG00000029073)	ENSMSIG00000029082
spretus	MODERN SPECIES	11	Eif3m (MGP_SPRETEiJ_G0024946)	Wt1 (MGP_SPRETEiJ_G0024947)	Them7 (MGP_SPRETEiJ_G0024948)	Rcn1 (MGP_SPRETEiJ_G0024949)	Pax6 (MGP_SPRETEiJ_G0024950)	Elp4 (MGP_SPRETEiJ_G0024951)	Immp1l (MGP_SPRETEiJ_G0024952)	Dnajc24 (MGP_SPRETEiJ_G0024953)	Mpped2 (MGP_SPRETEiJ_G0024954)	Arl14ep (MGP_SPRETEiJ_G0024955)	Fshb (MGP_SPRETEiJ_G0024956)	Kcna4 (MGP_SPRETEiJ_G0024957)	Trav4-2 (MGP_SPRETEiJ_G0002396)	Mettl15 (MGP_SPRETEiJ_G0024958)	Kif18a (MGP_SPRETEiJ_G0024959)	Bdnf (MGP_SPRETEiJ_G0024960) #22	Lin7c (MGP_SPRETEiJ_G0024961)	Lgr4 (MGP_SPRETEiJ_G0024962)	Ccdc34 (MGP_SPRETEiJ_G0024963)	MGP_SPRETEiJ_G0024964	Fibin (MGP_SPRETEiJ_G0024965)	Slc5a12 (MGP_SPRETEiJ_G0024966)	Ano3 (MGP_SPRETEiJ_G0024967)	Muc15 (MGP_SPRETEiJ_G0024968)	MGP_SPRETEiJ_G0024969	MGP_SPRETEiJ_G0024970	MGP_SPRETEiJ_G0024971	Or4f52 (MGP_SPRETEiJ_G0024972)	Or4f53 (MGP_SPRETEiJ_G0024973)	Or4k35 (MGP_SPRETEiJ_G0024974)	Or4f54 (MGP_SPRETEiJ_G0024975)
Ryukyu mouse	MODERN SPECIES	11	Ccdc73 (MGP_CAROLIEiJ_G0024032)	Eif3m (MGP_CAROLIEiJ_G0024033)	Wt1 (MGP_CAROLIEiJ_G0024034)	Them7 (MGP_CAROLIEiJ_G0024035)	Rcn1 (MGP_CAROLIEiJ_G0024036)	Pax6 (MGP_CAROLIEiJ_G0024037)	Elp4 (MGP_CAROLIEiJ_G0024038)	Immp1l (MGP_CAROLIEiJ_G0024039)	Dnajc24 (MGP_CAROLIEiJ_G0024040)	Mpped2 (MGP_CAROLIEiJ_G0024041)	Arl14ep (MGP_CAROLIEiJ_G0024042)	Fshb (MGP_CAROLIEiJ_G0024043)	Kcna4 (MGP_CAROLIEiJ_G0024044)	Mettl15 (MGP_CAROLIEiJ_G0024045)	Kif18a (MGP_CAROLIEiJ_G0024046)	Bdnf (MGP_CAROLIEiJ_G0024047) #22	Lin7c (MGP_CAROLIEiJ_G0024048)	Lgr4 (MGP_CAROLIEiJ_G0024049)	Ccdc34 (MGP_CAROLIEiJ_G0024050)	Bbox1 (MGP_CAROLIEiJ_G0024051)	Fibin (MGP_CAROLIEiJ_G0024052)	Slc5a12 (MGP_CAROLIEiJ_G0024053)	Ano3 (MGP_CAROLIEiJ_G0024054)	Muc15 (MGP_CAROLIEiJ_G0024055)	MGP_CAROLIEiJ_G0024056	MGP_CAROLIEiJ_G0024057	MGP_CAROLIEiJ_G0024058	Or4f52 (MGP_CAROLIEiJ_G0024059)	MGP_CAROLIEiJ_G0024060	MGP_CAROLIEiJ_G0024061	Or4k35 (MGP_CAROLIEiJ_G0024062)
Shrew mouse	MODERN SPECIES	16	Ccdc73 (MGP_PahariEiJ_G0025470)	Eif3m (MGP_PahariEiJ_G0025471)	Wt1 (MGP_PahariEiJ_G0025472)	Them7 (MGP_PahariEiJ_G0025473)	Rcn1 (MGP_PahariEiJ_G0025474)	Pax6 (MGP_PahariEiJ_G0025475)	Elp4 (MGP_PahariEiJ_G0025476)	Immp1l (MGP_PahariEiJ_G0025477)	Dnajc24 (MGP_PahariEiJ_G0025478)	Mpped2 (MGP_PahariEiJ_G0025479)	Arl14ep (MGP_PahariEiJ_G0025480)	Fshb (MGP_PahariEiJ_G0025481)	Kcna4 (MGP_PahariEiJ_G0025482)	Mettl15 (MGP_PahariEiJ_G0025483)	Kif18a (MGP_PahariEiJ_G0025484)	Bdnf (MGP_PahariEiJ_G0025485) #22	Lin7c (MGP_PahariEiJ_G0025486)	Lgr4 (MGP_PahariEiJ_G0025487)	Ccdc34 (MGP_PahariEiJ_G0025488)	Bbox1 (MGP_PahariEiJ_G0025489)	Fibin (MGP_PahariEiJ_G0025490)	Slc5a12 (MGP_PahariEiJ_G0025491)	Ano3 (MGP_PahariEiJ_G0025492)	Muc15 (MGP_PahariEiJ_G0025493)	MGP_PahariEiJ_G0025494	MGP_PahariEiJ_G0025495	MGP_PahariEiJ_G0025496	Or4f52 (MGP_PahariEiJ_G0025497)	MGP_PahariEiJ_G0025498	MGP_PahariEiJ_G0025499	Or4k35 (MGP_PahariEiJ_G0025500)
Rat	MODERN SPECIES	13	Wt1 (ENSRNOG00000013074)	LOC691083 (ENSRNOG00000013437)	Rcn1 (ENSRNOG00000013452)	Pax6 (ENSRNOG00000004410)	AABR07053185.1 (ENSRNOG00000004787)	LOC108350427 (ENSRNOG00000031694)	Immp1l (ENSRNOG00000004829)	Dnajc24 (ENSRNOG00000004842)	Dcdc1-ps1 (ENSRNOG00000022178)	Mpped2 (ENSRNOG00000004863)	Arl14ep (ENSRNOG00000004891)	Fshb (ENSRNOG00000004898)	Kcna4 (ENSRNOG00000004918)	Mettl15 (ENSRNOG00000066683)	Kif18a (ENSRNOG00000005037)	Bdnf (ENSRNOG00000047466) #22	Lin7c (ENSRNOG00000062543)	AC135294.1 (ENSRNOG00000053696)	Lgr4 (ENSRNOG00000005715)	Ccdc34 (ENSRNOG00000005902)	Slc25a5-ps9 (ENSRNOG00000068427)	Bbox1 (ENSRNOG00000059519)	Fibin (ENSRNOG00000004699)	Slc5a12 (ENSRNOG00000028008)	Ano3 (ENSRNOG00000004731)	Muc15 (ENSRNOG00000004703)	Potefam1 (ENSRNOG00000064354)	Or4f52 (ENSRNOG00000069454)	Or4f53 (ENSRNOG00000069793)	Or4f53b (ENSRNOG00000062576)	Or4k35 (ENSRNOG00000004920)
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698	ENSGT00940000155253.bb.a.a.b	ENSGT00940000155253.bb.a.a.a	ENSGT00940000162675	ENSGT00940000163079	ENSGT00940000163199	ENSGT00940000163067	ENSGT01030000234574.A.b.b
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00390000013482	ENSGT00390000004456	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00390000001698	ENSGT00940000156257	ENSGT00940000153661.a.b.a.b.a.b.b.b	ENSGT00940000160602.t	ENSGT00940000160602.s.a	ENSGT00940000163550	ENSGT00940000160602.s.b	ENSGT00940000162713.a.s	ENSGT00940000162052.u.b
Golden Hamster	MODERN SPECIES	618	Qser1 (ENSMAUG00000003616)	Prrg4 (ENSMAUG00000002732)	ENSMAUG00000009063	Eif3m (ENSMAUG00000007848)	Wt1 (ENSMAUG00000008036)	Them7 (ENSMAUG00000004067)	Rcn1 (ENSMAUG00000003393)	Pax6 (ENSMAUG00000009509)	Elp4 (ENSMAUG00000004673)	Dnajc24 (ENSMAUG00000002785)	Mpped2 (ENSMAUG00000001559)	Fshb (ENSMAUG00000002330)	Kcna4 (ENSMAUG00000001742)	Mettl15 (ENSMAUG00000001233)	Kif18a (ENSMAUG00000001496)	Bdnf (ENSMAUG00000021360) #22	Lin7c (ENSMAUG00000021220)	Lgr4 (ENSMAUG00000008786)	Ccdc34 (ENSMAUG00000007534)	Bbox1 (ENSMAUG00000005985)	Fibin (ENSMAUG00000010806)	Slc5a12 (ENSMAUG00000004871)	Muc15 (ENSMAUG00000003135)	Ano3 (ENSMAUG00000003845)	ENSMAUG00000021370	ENSMAUG00000021284	ENSMAUG00000021180	ENSMAUG00000001930	ENSMAUG00000001244	Or4g17 (ENSMAUG00000021110)	ENSMAUG00000021350
Chinese hamster chok1gshd	MODERN SPECIES	188	Pax6 (ENSCGRG00001020702)	Elp4 (ENSCGRG00001019577)	Immp1l (ENSCGRG00001019289)	Dnajc24 (ENSCGRG00001018592)	ENSCGRG00001017684	ENSCGRG00001002326	Mpped2 (ENSCGRG00001024832)	Arl14ep (ENSCGRG00001024357)	Fshb (ENSCGRG00001023985)	ENSCGRG00001023822	Kcna4 (ENSCGRG00001001091)	ENSCGRG00001023034	ENSCGRG00001024320	Mettl15 (ENSCGRG00001023906)	Kif18a (ENSCGRG00001023500)	Bdnf (ENSCGRG00001022995) #22	Lin7c (ENSCGRG00001014267)	Lgr4 (ENSCGRG00001012309)	Ccdc34 (ENSCGRG00001011466)	Bbox1 (ENSCGRG00001009712)	Fibin (ENSCGRG00001004439)	Slc5a12 (ENSCGRG00001004812)	Muc15 (ENSCGRG00001002313)	Ano3 (ENSCGRG00001001072)	ENSCGRG00001024859	ENSCGRG00001012130	ENSCGRG00001001447	ENSCGRG00001011769	ENSCGRG00001011934	Or4k35 (ENSCGRG00001011057)	ENSCGRG00001010779
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00940000156734	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443	ENSGT00550000075025	ENSGT00390000005430	ENSGT00390000016867	ENSGT00940000166699	ENSGT00390000007681.a	ENSGT00940000156586	ENSGT00940000160051	ENSGT00940000162248	ENSGT00390000014756	ENSGT00940000159058	ENSGT00390000007725.B.d #22	ENSGT00940000153222.a.b.b.a	ENSGT00940000157925	ENSGT00730000111271	ENSGT00530000063582.b	ENSGT00390000007623	ENSGT00940000159545	ENSGT00940000156257	ENSGT00390000001698
Prairie vole	MODERN SPECIES	81	Wt1 (ENSMOCG00000006225)	Them7 (ENSMOCG00000010419)	Rcn1 (ENSMOCG00000011897)	Pax6 (ENSMOCG00000017625)	Elp4 (ENSMOCG00000009942)	Immp1l (ENSMOCG00000000239)	Dnajc24 (ENSMOCG00000003631)	ENSMOCG00000009178	Mpped2 (ENSMOCG00000002797)	Arl14ep (ENSMOCG00000016817)	Fshb (ENSMOCG00000019709)	Kcna4 (ENSMOCG00000010908)	Mettl15 (ENSMOCG00000014905)	Kif18a (ENSMOCG00000019106)	ENSMOCG00000012556	BDNF (ENSMOCG00000000420) #22	Lin7c (ENSMOCG00000017113)	Lgr4 (ENSMOCG00000016806)	Ccdc34 (ENSMOCG00000007200)	Bbox1 (ENSMOCG00000001592)	Fibin (ENSMOCG00000009161)	Slc5a12 (ENSMOCG00000015104)	Ano3 (ENSMOCG00000021978)	Muc15 (ENSMOCG00000015142)	Qser1 (ENSMOCG00000001478)	Depdc7 (ENSMOCG00000016709)	Tcp11l1 (ENSMOCG00000017298)	Cstf3 (ENSMOCG00000017583)	Hipk3 (ENSMOCG00000002204)	D430041D05Rik (ENSMOCG00000003074)	A930018P22Rik (ENSMOCG00000013797)
Northern American deer mouse	MODERN SPECIES	17	Wt1 (ENSPEMG00000001292)	Them7 (ENSPEMG00000010578)	Rcn1 (ENSPEMG00000005747)	Pax6 (ENSPEMG00000017076)	Elp4 (ENSPEMG00000014413)	Immp1l (ENSPEMG00000012294)	Dnajc24 (ENSPEMG00000009627)	ENSPEMG00000028596	ENSPEMG00000027454	Mpped2 (ENSPEMG00000031263)	Arl14ep (ENSPEMG00000002547)	Fshb (ENSPEMG00000016453)	Kcna4 (ENSPEMG00000000419)	Mettl15 (ENSPEMG00000019783)	Kif18a (ENSPEMG00000019708)	Bdnf (ENSPEMG00000019659) #22	Lin7c (ENSPEMG00000019637)	Lgr4 (ENSPEMG00000019524)	Ccdc34 (ENSPEMG00000019443)	Bbox1 (ENSPEMG00000019397)	Fibin (ENSPEMG00000012551)	Slc5a12 (ENSPEMG00000019298)	ENSPEMG00000019287	Muc15 (ENSPEMG00000019285)	ENSPEMG00000030718	Or4f61 (ENSPEMG00000028347)	ENSPEMG00000025291	ENSPEMG00000028285	Or4f58 (ENSPEMG00000027219)	Or4f15 (ENSPEMG00000029767)	Lpcat4 (ENSPEMG00000020020)
Upper Galilee mountains blind mole rat	MODERN SPECIES	492	Eif3m (ENSNGAG00000006519)	Wt1 (ENSNGAG00000022234)	Them7 (ENSNGAG00000017585)	Rcn1 (ENSNGAG00000015767)	ENSNGAG00000014814	Pax6 (ENSNGAG00000017748)	Elp4 (ENSNGAG00000006201)	Immp1l (ENSNGAG00000023016)	ENSNGAG00000021710	Mpped2 (ENSNGAG00000024208)	Arl14ep (ENSNGAG00000023974)	Fshb (ENSNGAG00000004419)	Kcna4 (ENSNGAG00000023446)	Mettl15 (ENSNGAG00000020743)	Kif18a (ENSNGAG00000024258)	Bdnf (ENSNGAG00000004750) #22	Lin7c (ENSNGAG00000003441)	ENSNGAG00000021530	ENSNGAG00000021219