Actinopterygii ANCESTRAL SPECIES 206 ENSGT00940000161928 ENSGT00950000186109 ENSGT00390000006843 ENSGT00910000144273 ENSGT01010000223148 ENSGT00940000166999.A ENSGT00950000182888.b ENSGT00940000154842.a.a ENSGT00940000154394.b.a.a.a.a.b ENSGT00940000154394.b.a.b ENSGT00620000089226 ENSGT00950000183177.a.a.a.b ENSGT00940000164907 #18 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT00930000151050 #23 Neopterygii ANCESTRAL SPECIES 197 ENSGT00940000161928 ENSGT00950000186109 ENSGT00390000006843 ENSGT00910000144273 ENSGT01010000223148 ENSGT00940000166999.A ENSGT00950000182888.b ENSGT00940000154842.a.a ENSGT00940000154394.b.a.a.a.a.b ENSGT00940000154394.b.a.b ENSGT00620000089226 ENSGT00940000164907 #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT00930000151050 #23 Osteoglossocephalai ANCESTRAL SPECIES 49 ENSGT00940000166116 ENSGT00390000016384 ENSGT00940000158501 ENSGT00940000153772.B ENSGT00390000009566 ENSGT00940000165669 ENSGT00940000157419 #9 ENSGT00940000159990 #10 ENSGT00940000158540 #11 ENSGT00940000156261 #12 ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000160451 #27 ENSGT00940000154645.B #28 ENSGT00940000155945.i.a #33 ENSGT00940000163762.b #34 ENSGT00390000000642 #35 ENSGT00940000156611 #36 ENSGT00390000016543.c ##37 ENSGT00390000016543.d #37 ENSGT00390000016002 Osteoglossiformes ANCESTRAL SPECIES 164 ENSGT00940000158501.b ENSGT00940000172233 ENSGT00940000157194.e ENSGT00940000153391.c.b.a.g #8 ENSGT00940000157419 #9 ENSGT00940000159990.g #10 ENSGT00940000158540 #11 ENSGT00940000156261 #12 ENSGT00950000183101.a.b.b.a.a.k #13 ENSGT00940000155373 #14 ENSGT00390000016526.g #15 ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.a #19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286.b ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.c.b #25 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000160451 #27 ENSGT00940000154645.B.a #28 ENSGT00530000064359.d #29 ENSGT00940000155946.b #30 ENSGT00940000160616.w #31 ENSGT00940000157955.d.a.j #32 ENSGT00940000155945.i.a #33 ENSGT00940000154374.a ENSGT00940000163762.b #34 ENSGT00390000000642 #35 Asian bonytongue MODERN SPECIES 21 ENSSFOG00015028783 #7 NR5A1 (ENSSFOG00015029487) #8 psmb7 (ENSSFOG00015014825) #9 NEK6 (ENSSFOG00015014790) #10 lhx2b (ENSSFOG00015014773) #11 DENND1A (ENSSFOG00015014700) #12 CRB2 (ENSSFOG00015014561) #13 cdk9 (ENSSFOG00015014527) #14 fpgs (ENSSFOG00015014398) #15 ENSSFOG00015014320 #16 ENSSFOG00015015629 #17 ENSSFOG00015014116 #18 ENSSFOG00015014104 #19 pole3 (ENSSFOG00015014086) #20 RPL12 (ENSSFOG00015029067) #21 lrsam1 (ENSSFOG00015013925) #22 ndor1 (ENSSFOG00015013852) #23 ntmt1 (ENSSFOG00015013835) #24 IER5L (ENSSFOG00015027039) #25 crata (ENSSFOG00015013784) #26 gpr107 (ENSSFOG00015013755) #27 NCS1 (ENSSFOG00015032851) #28 ENSSFOG00015013708 #29 ENSSFOG00015013693 #30 zbtb43 (ENSSFOG00015031491) #31 lmx1ba (ENSSFOG00015013658) #32 mvb12ba (ENSSFOG00015013632) #33 ENSSFOG00015028925 #34 MAPKAP1 (ENSSFOG00015013491) #35 ENSSFOG00015013445 #36 AJM1 (ENSSFOG00015013436) #37 P. kingsleyae MODERN SPECIES 557 ENSPKIG00000018761 ENSPKIG00000018741 #16 ENSPKIG00000018725 ENSPKIG00000018706 lmo4a (ENSPKIG00000018685) #18 ccn1l2 (ENSPKIG00000018660) #19 pole3 (ENSPKIG00000018647) #20 rpl12 (ENSPKIG00000018595) #21 lrsam1 (ENSPKIG00000018514) #22 ENSPKIG00000018450 ndor1 (ENSPKIG00000018380) #23 ntmt1 (ENSPKIG00000018336) #24 Clupeocephala ANCESTRAL SPECIES 195 ENSGT00390000016384.l.a ENSGT00940000158501.d.a ENSGT00390000009566 ENSGT00940000165669 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157419 #9 ENSGT00940000159990 #10 ENSGT00940000158540 #11 ENSGT00940000156261 #12 ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000154394.b.a.a.b.b ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00930000151016 ENSGT00940000155946.c.b #30 ENSGT00940000160616 #31 ENSGT00940000157955.d.a #32 ENSGT00940000155945.i.a #33 ENSGT00940000164541 ENSGT00390000000642 #35 ENSGT00390000016543.d #37 ENSGT00390000016002.o.b Otomorpha ANCESTRAL SPECIES 193 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157419 #9 ENSGT00940000159990 #10 ENSGT00940000158540 #11 ENSGT00940000156261 #12 ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000155373 #14 ENSGT00390000016526 #15 ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000160451 #27 ENSGT00940000154645.B #28 ENSGT00930000151016 ENSGT00940000155946.c.b #30 ENSGT00940000154079.b.b ENSGT00940000160616 #31 ENSGT00940000157955.d.a #32 ENSGT00940000155945.i.a #33 ENSGT00940000164541 ENSGT00390000000642 #35 Clupeiformes ANCESTRAL SPECIES 105 ENSGT00940000157936 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157419 #9 ENSGT00940000159990 #10 ENSGT00940000158540 #11 ENSGT00940000156261 #12 ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000155373 #14 ENSGT00390000016526 #15 ENSGT00390000020276.mb.b #16 ENSGT00940000154394.b.a.a.a.a.a.b ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d.a ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000160451 #27 ENSGT00940000154645.B.e #28 ENSGT00930000151016 ENSGT00940000155946.c.b #30 ENSGT00940000154079.b.b ENSGT00940000153601.a.a.e.b.a ENSGT00940000160918 ENSGT00390000013112 ENSGT00390000008565.a ENSGT00940000157958 Denticle herring MODERN SPECIES 13 nr5a1b (ENSDCDG00000013415) #8 psmb7 (ENSDCDG00000013357) #9 NEK6 (ENSDCDG00000013125) #10 LHX2 (ENSDCDG00000013115) #11 DENND1A (ENSDCDG00000029744) #12 CRB2 (ENSDCDG00000029740) ##13 cdk9 (ENSDCDG00000029739) #14 fpgs (ENSDCDG00000028799) #15 ENSDCDG00000028697 #16 ENSDCDG00000028678 lmo4a (ENSDCDG00000028675) #18 ccn1l1 (ENSDCDG00000028541) ##19 ENSDCDG00000028537 pole3 (ENSDCDG00000028534) #20 rpl12 (ENSDCDG00000028508) #21 lrsam1 (ENSDCDG00000028407) #22 ndor1 (ENSDCDG00000028380) #23 ntmt1 (ENSDCDG00000028367) #24 ier5l (ENSDCDG00000028362) ##25 ptpa (ENSDCDG00000027993) crata (ENSDCDG00000027328) #26 gpr107 (ENSDCDG00000027253) #27 ncs1a (ENSDCDG00000027251) #28 fbxw2 (ENSDCDG00000027250) angptl2a (ENSDCDG00000027249) #30 RALGPS1 (ENSDCDG00000027193) zbtb43 (ENSDCDG00000027184) #31 lmx1ba (ENSDCDG00000027182) #32 mvb12ba (ENSDCDG00000027181) #33 ENSDCDG00000027173 #34 MAPKAP1 (ENSDCDG00000027163) #35 Atlantic herring MODERN SPECIES 3 NR6A1 (ENSCHAG00000009757) nr5a1b (ENSCHAG00000009743) #8 psmb7 (ENSCHAG00000009649) #9 NEK6 (ENSCHAG00000009167) #10 LHX2 (ENSCHAG00000009120) #11 DENND1A (ENSCHAG00000007433) #12 CRB2 (ENSCHAG00000007287) ##13 cdk9 (ENSCHAG00000007237) #14 fpgs (ENSCHAG00000006452) #15 ENSCHAG00000005894 #16 ENSCHAG00000005749 lmo4a (ENSCHAG00000005730) #18 ccn1l1 (ENSCHAG00000005656) ##19 pole3 (ENSCHAG00000005619) #20 rpl12 (ENSCHAG00000005485) #21 lrsam1 (ENSCHAG00000005132) #22 ndor1 (ENSCHAG00000004879) #23 ntmt1 (ENSCHAG00000004859) #24 ier5l (ENSCHAG00000004832) ##25 ptpa (ENSCHAG00000004320) crata (ENSCHAG00000003848) #26 gpr107 (ENSCHAG00000003724) #27 ncs1a (ENSCHAG00000003645) #28 fbxw2 (ENSCHAG00000003600) angptl2a (ENSCHAG00000003585) #30 RALGPS1 (ENSCHAG00000002473) zbtb43 (ENSCHAG00000002356) #31 ENSCHAG00000026083 ENSCHAG00000026067 dolpp1 (ENSCHAG00000026063) miga2 (ENSCHAG00000026011) Otophysi ANCESTRAL SPECIES 100 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a ENSGT00390000020276.mb.b #16 ENSGT00940000154394.b.a.a.b.b ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT00940000155151.a.a.a #19 ENSGT00940000164907.b.a ##18 ENSGT00620000089226 ENSGT00940000154394.b.a.a.a.a.a.b ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00390000011500 ENSGT00900000141021.b.a.d ##25 ENSGT00390000008371.b #24 ENSGT00930000151050 #23 ENSGT00940000160451 #27 ENSGT00940000154645.B #28 ENSGT00930000151016 ENSGT00390000001195.a.b ENSGT00940000159777 Characiphysae ANCESTRAL SPECIES 142 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a ENSGT00390000020276.mb.b #16 ENSGT00390000020276.mb.a #16 ENSGT00940000154394.b.a.a.a.b.a.b ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00390000011500 ENSGT00900000141021.b.a.d ##25 ENSGT00390000008371.b #24 ENSGT00930000151050 #23 ENSGT00940000160451 #27 ENSGT00940000154645.B #28 ENSGT00930000151016 ENSGT00390000001195.a.b ENSGT00940000159777 ENSGT00940000155567 ENSGT00390000012762.v ENSGT00940000155882.a.b.b ENSGT00940000164626.b.b.c.a Channel catfish MODERN SPECIES 20 surf6 (ENSIPUG00000008066) kyat1 (ENSIPUG00000008008) kyat1 (ENSIPUG00000007984) kyat1 (ENSIPUG00000007957) prkaa1 (ENSIPUG00000007912) ENSIPUG00000007883 ENSIPUG00000007855 NPFFR2 (ENSIPUG00000007782) ENSIPUG00000007759 ENSIPUG00000007750 ENSIPUG00000007738 lmo4a (ENSIPUG00000007705) #18 ccn1l1 (ENSIPUG00000007680) ##19 pole3 (ENSIPUG00000007668) #20 rpl12 (ENSIPUG00000007575) #21 Lrsam1 (ENSIPUG00000007487) #22 ENSIPUG00000007367 crat (ENSIPUG00000007250) #26 ptpa (ENSIPUG00000007164) ier5l (ENSIPUG00000007148) ##25 ntmt1 (ENSIPUG00000007083) #24 ENSIPUG00000007066 ndor1 (ENSIPUG00000006992) #23 gpr107 (ENSIPUG00000006957) #27 ncs1 (ENSIPUG00000006898) #28 ENSIPUG00000006858 fbxw2 (ENSIPUG00000006792) GAS1 (ENSIPUG00000006779) c9 (ENSIPUG00000006737) dab2 (ENSIPUG00000006718) hspb15 (ENSIPUG00000006686) Characiphysae_b ANCESTRAL SPECIES 43 ENSGT00390000004339 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00390000020276.mb.a #16 ENSGT00940000154394.b.a.a.a.b.a.b ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00390000011500 ENSGT00900000141021.b.a.d ##25 ENSGT00390000008371.b #24 ENSGT00930000151050 #23 ENSGT00940000160451 #27 ENSGT00940000154645.B #28 ENSGT00930000151016 ENSGT00390000001195.a.b ENSGT00940000159777 ENSGT00940000155567 ENSGT00940000155882.a.b.b ENSGT00940000164626.b.b.c.a ENSGT00940000155735.r Electric eel MODERN SPECIES 29 med22 (ENSEEEG00000014972) RPL7A (ENSEEEG00000014979) surf1 (ENSEEEG00000014996) surf6 (ENSEEEG00000014997) kyat1 (ENSEEEG00000014998) prkaa1 (ENSEEEG00000015011) ENSEEEG00000015021 ENSEEEG00000015040 NPFFR2 (ENSEEEG00000015048) ENSEEEG00000015134 #16 ENSEEEG00000015143 lmo4a (ENSEEEG00000015152) #18 ccn1l1 (ENSEEEG00000015155) ##19 pole3 (ENSEEEG00000015165) #20 rpl12 (ENSEEEG00000015168) #21 lrsam1 (ENSEEEG00000015206) #22 crata (ENSEEEG00000015351) #26 ptpa (ENSEEEG00000015855) ier5l (ENSEEEG00000016141) ##25 ntmt1 (ENSEEEG00000016143) #24 ndor1 (ENSEEEG00000016145) #23 gpr107 (ENSEEEG00000016155) #27 ncs1a (ENSEEEG00000016162) #28 capga (ENSEEEG00000016178) ENSEEEG00000016190 tp53 (ENSEEEG00000016191) gps2 (ENSEEEG00000016194) gabarapa (ENSEEEG00000016196) ctdnep1a (ENSEEEG00000016202) phf23a (ENSEEEG00000016207) plscr3a (ENSEEEG00000016210) Characoidei ANCESTRAL SPECIES 69 ENSGT00940000158829 ENSGT00390000009787 ENSGT00390000004339 ENSGT00940000155193 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00390000011500 ENSGT00900000141021.b.a.d ##25 ENSGT00390000008371.b #24 ENSGT00930000151050 #23 ENSGT00940000160451 #27 ENSGT00940000154645.B #28 ENSGT00930000151016 ENSGT00390000001195.a.b ENSGT00940000159777 ENSGT00940000155567 ENSGT00940000155882.a.b.b Mexicana tetra MODERN SPECIES 119 pole3 (ENSAMXG00000033855) #20 rpl12 (ENSAMXG00000012766) #21 lrsam1 (ENSAMXG00000012781) #22 ENSAMXG00000012799 crata (ENSAMXG00000012819) #26 ptpa (ENSAMXG00000033525) ier5l (ENSAMXG00000025651) ##25 ntmt1 (ENSAMXG00000012851) #24 ndor1 (ENSAMXG00000012864) #23 gpr107 (ENSAMXG00000012900) #27 Red-bellied piranha MODERN SPECIES 2 NPFFR2 (ENSPNAG00000024089) ENSPNAG00000024069 #16 ENSPNAG00000024010 zgc:55461 (ENSPNAG00000023984) lmo4a (ENSPNAG00000023937) #18 ccn1l1 (ENSPNAG00000023906) ##19 pole3 (ENSPNAG00000023860) #20 rpl12 (ENSPNAG00000023834) #21 lrsam1 (ENSPNAG00000023778) #22 ENSPNAG00000023633 crata (ENSPNAG00000023586) #26 ptpa (ENSPNAG00000023503) ier5l (ENSPNAG00000023424) ##25 ntmt1 (ENSPNAG00000023338) #24 ndor1 (ENSPNAG00000023402) #23 gpr107 (ENSPNAG00000023306) #27 ncs1a (ENSPNAG00000023289) #28 fbxw2 (ENSPNAG00000023239) gas1b (ENSPNAG00000023216) c9 (ENSPNAG00000023200) ENSPNAG00000023180 ENSPNAG00000023158 hspb15 (ENSPNAG00000023148) oxt (ENSPNAG00000023140) Cyprinoidei ANCESTRAL SPECIES 19 ENSGT00940000158797 ENSGT00950000182857.a.b ENSGT00940000158865 ENSGT00940000154886.a.b ENSGT00940000154821.a.a ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a ENSGT00390000020276.mb.b #16 ENSGT00390000020276.mb.a #16 ENSGT00940000154394.b.a.a.a.b.a.b ENSGT00940000154394.b.a.a.b.b.c.b ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286 ENSGT00940000155151.a.a.a #19 ENSGT00940000164907.b.a ##18 ENSGT00620000089226 ENSGT00940000154394.b.a.a.a.a.a.b ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00390000011500 ENSGT00900000141021.b.a.d ##25 ENSGT00390000008371.b #24 ENSGT00930000151050 #23 ENSGT00940000160451 #27 ENSGT00940000154645.B #28 ENSGT00940000164697.b ENSGT00530000064359.c.b.h ##29 ENSGT00930000151016 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00390000004339.s ENSGT00940000153294.h ENSGT00530000064194.g ENSGT00390000006980.c ENSGT00940000158797.v ENSGT00950000182857.a.b ENSGT00940000158865.o ENSGT00940000154886.a.b.k ENSGT00940000154821.a.a.a ENSGT00940000165492.a.a.c.a ENSGT00940000154394.b.a.a.b.b.c.b ENSGT00940000164907.b.b.b.b #18 ENSGT00940000155151.a.a.b.a ##19 ENSGT00940000164386.f #20 ENSGT00390000006922.d #21 ENSGT00930000151044.a #22 ENSGT01060000248556.A.a.a.a.b.a.c #26 ENSGT00390000011500.f ENSGT00900000141021.b.a.d.c ##25 ENSGT00390000008371.b.c #24 ENSGT00930000151050.b #23 ENSGT00940000160451.b #27 ENSGT00940000154645.B.i.b #28 ENSGT00930000151016.y ENSGT00390000001195.a.b.a ENSGT00940000155567.w.a ENSGT00940000155882.a.b.b.e ENSGT00940000164626.b.b.c.a.f ENSGT00940000155735.r.fb ENSGT00420000029890.b ENSGT00940000155845.t.a Goldfish MODERN SPECIES 44 ptges (ENSCARG00000000808) usp20 (ENSCARG00000000727) zgc:103692 (ENSCARG00000000655) med22 (ENSCARG00000000632) RPL7A (ENSCARG00000000600) surf1 (ENSCARG00000000586) ENSCARG00000000581 prkaa1 (ENSCARG00000000442) ENSCARG00000000336 ENSCARG00000000301 ENSCARG00000000244 lmo4a (ENSCARG00000000232) #18 ccn1l1 (ENSCARG00000000221) ##19 pole3 (ENSCARG00000000215) #20 rpl12 (ENSCARG00000000170) #21 lrsam1 (ENSCARG00000015688) #22 crata (ENSCARG00000014355) #26 ptpa (ENSCARG00000014256) ier5l (ENSCARG00000014243) ##25 ENSCARG00000014240 ntmt1 (ENSCARG00000014228) #24 gpr107 (ENSCARG00000014211) #27 ncs1a (ENSCARG00000014199) #28 fbxw2 (ENSCARG00000014196) gas1b (ENSCARG00000014190) dab2 (ENSCARG00000014173) hspb15 (ENSCARG00000014158) ENSCARG00000013314 ENSCARG00000013006 ENSCARG00000012967 m17 (ENSCARG00000012960) Cyprininae_a ANCESTRAL SPECIES ENSGT00390000009787.cb ENSGT00390000004339.s ENSGT00530000064194.g ENSGT00390000006980.c ENSGT00940000158797.v ENSGT00950000182857.a.b ENSGT00940000158865.o ENSGT00940000154886.a.b.k ENSGT00940000154821.a.a.a ENSGT00940000165492.a.a.c.a ENSGT00940000154394.b.a.a.b.b.c.a ENSGT00940000164907.b.b.b.b #18 ENSGT00940000155151.a.a.b.a ##19 ENSGT00940000164386.f #20 ENSGT00390000006922.d #21 ENSGT00930000151044.a #22 ENSGT01060000248556.A.a.a.a.b.a.c #26 ENSGT00390000011500.f ENSGT00900000141021.b.a.d.c ##25 ENSGT00390000008371.b.c #24 ENSGT00930000151050.b #23 ENSGT00940000160451.b #27 ENSGT00940000163010.u.b ENSGT00930000151016.y ENSGT00390000001195.a.b.a ENSGT00940000155567.w.a ENSGT00940000155882.a.b.b.e ENSGT00940000164626.b.b.c.a.f ENSGT00940000155735.r.fb ENSGT00420000029890.b ENSGT00940000155845.t.a Common carp reference MODERN SPECIES 7 zgc:103692 (ENSCCRG00000034113) med22 (ENSCCRG00000074301) surf1 (ENSCCRG00000081884) RPL7A (ENSCCRG00000034022) kyat1 (ENSCCRG00000062125) prkaa1 (ENSCCRG00000078593) ENSCCRG00000031194 ENSCCRG00000055438 ENSCCRG00000052661 ENSCCRG00000031181 ENSCCRG00000054308 lmo4a (ENSCCRG00000075174) #18 ccn1l1 (ENSCCRG00000035740) ##19 pole3 (ENSCCRG00000080860) #20 rpl12 (ENSCCRG00000071587) #21 lrsam1 (ENSCCRG00000034301) #22 crata (ENSCCRG00000031927) #26 ptpa (ENSCCRG00000031445) ntmt1 (ENSCCRG00000043894) #24 gpr107 (ENSCCRG00000043862) #27 ENSCCRG00000071330 fbxw2 (ENSCCRG00000053560) dab2 (ENSCCRG00000026586) ENSCCRG00000056047 ENSCCRG00000072823 ENSCCRG00000013876 m17 (ENSCCRG00000013882) tescb (ENSCCRG00000071303) ENSCCRG00000013913 zmat5 (ENSCCRG00000074583) arpc5lb (ENSCCRG00000063903) Golden-line barbel MODERN SPECIES 91 med22 (ENSSGRG00000016907) ENSSGRG00000016903 surf1 (ENSSGRG00000016901) surf6 (ENSSGRG00000016898) kyat1 (ENSSGRG00000016230) ifitm1 (ENSSGRG00000016208) prkaa1 (ENSSGRG00000016198) ENSSGRG00000016196 ENSSGRG00000016195 ENSSGRG00000016154 zgc:55461 (ENSSGRG00000016148) lmo4a (ENSSGRG00000016145) #18 ccn1l1 (ENSSGRG00000016144) ##19 pole3 (ENSSGRG00000016141) #20 rpl12 (ENSSGRG00000016092) #21 lrsam1 (ENSSGRG00000016091) #22 crata (ENSSGRG00000015586) #26 ptpa (ENSSGRG00000015567) ier5l (ENSSGRG00000015565) ##25 ntmt1 (ENSSGRG00000015561) #24 ndor1 (ENSSGRG00000015544) #23 gpr107 (ENSSGRG00000015537) #27 fbxw2 (ENSSGRG00000015532) gas1b (ENSSGRG00000015530) ENSSGRG00000015528 dab2 (ENSSGRG00000015508) hspb15 (ENSSGRG00000015504) ENSSGRG00000015499 ENSSGRG00000015492 m17 (ENSSGRG00000015489) tescb (ENSSGRG00000015488) Cyprininae ANCESTRAL SPECIES 48 ENSGT00530000064194.h ENSGT00390000006980.d ENSGT00940000158797.u ENSGT00940000158865.p ENSGT00940000154886.a.b.l ENSGT00940000154821.a.a.b ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a.c.b ENSGT00940000165492.a.a.d ENSGT00390000020276.mb.a #16 ENSGT00940000154394.b.a.a.a.b.a.b ENSGT00940000164907.b.b.b.a #18 ENSGT00940000155151.a.a.b.b ##19 ENSGT00940000164386.e #20 ENSGT00390000006922.c #21 ENSGT00930000151044.b #22 ENSGT00530000064286.n ENSGT01060000248556.A.a.a.a.b.a.d #26 ENSGT00390000011500.e ENSGT00900000141021.b.a.d.d ##25 ENSGT00390000008371.b.d #24 ENSGT00930000151050.a #23 ENSGT00940000160451.a #27 ENSGT00940000154645.B.i.a #28 ENSGT00930000151016.z ENSGT00390000001195.a.b.b ENSGT00940000159777 ENSGT00940000155567.w.b ENSGT00940000164626.b.b.c.a.e ENSGT00940000155882.a.b.b.f ENSGT00940000155735.r.gb Cyprininae_a ANCESTRAL SPECIES 22 ENSGT00390000004339.t ENSGT00940000153294.g ENSGT00530000064194.h ENSGT00390000006980.d ENSGT00940000158797.u ENSGT00940000158865.p ENSGT00940000154886.a.b.l ENSGT00940000154821.a.a.b ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a.c.b ENSGT00940000154394.b.a.a.b.b.c.b ENSGT00940000164907.b.b.b.a #18 ENSGT00940000155151.a.a.b.b ##19 ENSGT00940000164386.e #20 ENSGT00390000006922.c #21 ENSGT00930000151044.b #22 ENSGT00530000064286.n ENSGT01060000248556.A.a.a.a.b.a.d #26 ENSGT00390000011500.e ENSGT00900000141021.b.a.d.d ##25 ENSGT00390000008371.b.d #24 ENSGT00930000151050.a #23 ENSGT00940000160451.a #27 ENSGT00940000154645.B.i.a #28 ENSGT00930000151016.z ENSGT00390000001195.a.b.b ENSGT00940000159777 ENSGT00940000155567.w.b ENSGT00940000164626.b.b.c.a.e ENSGT00940000155882.a.b.b.f ENSGT00420000029890.a Golden-line barbel MODERN SPECIES 11 surf6 (ENSSGRG00000046151) kyat1 (ENSSGRG00000046159) prkaa1 (ENSSGRG00000046663) ENSSGRG00000046776 ENSSGRG00000046777 ENSSGRG00000046778 NPFFR2 (ENSSGRG00000046781) ENSSGRG00000046830 ENSSGRG00000046831 ENSSGRG00000046834 #16 ENSSGRG00000046838 lmo4a (ENSSGRG00000046844) #18 ccn1l1 (ENSSGRG00000046845) ##19 pole3 (ENSSGRG00000046846) #20 rpl12 (ENSSGRG00000046847) #21 lrsam1 (ENSSGRG00000046852) #22 crata (ENSSGRG00000001397) #26 ptpa (ENSSGRG00000003585) ier5l (ENSSGRG00000005440) ##25 ntmt1 (ENSSGRG00000005442) #24 ndor1 (ENSSGRG00000005492) #23 gpr107 (ENSSGRG00000006218) #27 ncs1a (ENSSGRG00000006493) #28 fbxw2 (ENSSGRG00000006505) gas1b (ENSSGRG00000006506) c9 (ENSSGRG00000006507) dab2 (ENSSGRG00000006535) hspb15 (ENSSGRG00000006546) ENSSGRG00000006569 ENSSGRG00000007534 m17 (ENSSGRG00000007538) Common carp reference MODERN SPECIES 15 zgc:103692 (ENSCCRG00000057134) med22 (ENSCCRG00000034299) ENSCCRG00000057824 surf1 (ENSCCRG00000034272) kyat1 (ENSCCRG00000081468) prkaa1 (ENSCCRG00000034210) ENSCCRG00000056731 ENSCCRG00000001587 ENSCCRG00000050873 ENSCCRG00000030567 zgc:55461 (ENSCCRG00000028081) lmo4a (ENSCCRG00000035744) #18 ccn1l1 (ENSCCRG00000024280) ##19 pole3 (ENSCCRG00000054380) #20 rpl12 (ENSCCRG00000035688) #21 lrsam1 (ENSCCRG00000024030) #22 ENSCCRG00000024040 crata (ENSCCRG00000024065) #26 ptpa (ENSCCRG00000025867) ier5l (ENSCCRG00000057758) ##25 ntmt1 (ENSCCRG00000058345) #24 ndor1 (ENSCCRG00000032106) #23 gpr107 (ENSCCRG00000032112) #27 ncs1a (ENSCCRG00000032121) #28 fbxw2 (ENSCCRG00000074424) c9 (ENSCCRG00000032128) dab2 (ENSCCRG00000032132) ENSCCRG00000060779 ENSCCRG00000059079 ENSCCRG00000078969 ENSCCRG00000078355 Goldfish MODERN SPECIES 23 med22 (ENSCARG00000005742) RPL7A (ENSCARG00000059940) surf1 (ENSCARG00000059885) surf6 (ENSCARG00000059875) kyat1 (ENSCARG00000059358) prkaa1 (ENSCARG00000059027) ENSCARG00000059013 NPFFR2 (ENSCARG00000059007) ENSCARG00000058950 ENSCARG00000058849 #16 ENSCARG00000058801 lmo4a (ENSCARG00000058713) #18 ccn1l1 (ENSCARG00000058690) ##19 pole3 (ENSCARG00000058656) #20 rpl12 (ENSCARG00000058517) #21 lrsam1 (ENSCARG00000057109) #22 ENSCARG00000057036 crata (ENSCARG00000055185) #26 ptpa (ENSCARG00000054252) ier5l (ENSCARG00000054199) ##25 ntmt1 (ENSCARG00000054134) #24 ndor1 (ENSCARG00000054025) #23 gpr107 (ENSCARG00000053925) #27 ncs1a (ENSCARG00000053890) #28 fbxw2 (ENSCARG00000053886) gas1b (ENSCARG00000053873) c9 (ENSCARG00000053807) dab2 (ENSCARG00000053753) hspb15 (ENSCARG00000053678) ENSCARG00000053479 ENSCARG00000053229 Zebrafish MODERN SPECIES 20 rpl7a (ENSDARG00000019230) surf1 (ENSDARG00000003592) surf6 (ENSDARG00000035427) kyat1 (ENSDARG00000023645) ifitm1 (ENSDARG00000093303) prkaa1 (ENSDARG00000060596) ENSDARG00000060584 ENSDARG00000060578 NPFFR2 (ENSDARG00000060702) ENSDARG00000041724 zgc:55461 (ENSDARG00000041723) lmo4a (ENSDARG00000013853) #18 ccn1l1 (ENSDARG00000035422) ##19 pole3 (ENSDARG00000008551) #20 rpl12 (ENSDARG00000006691) #21 lrsam1 (ENSDARG00000060683) #22 ENSDARG00000095142 crata (ENSDARG00000040248) #26 ptpa (ENSDARG00000031985) ier5l (ENSDARG00000054906) ##25 ntmt1 (ENSDARG00000022399) #24 ndor1 (ENSDARG00000007429) #23 gpr107 (ENSDARG00000103200) #27 ncs1a (ENSDARG00000055229) #28 fbxw2 (ENSDARG00000009745) gas1b (ENSDARG00000067984) c9 (ENSDARG00000016319) dab2 (ENSDARG00000031761) hspb15 (ENSDARG00000078411) myhz1.1 (ENSDARG00000067990) myhz1.2 (ENSDARG00000067995) Euteleosteomorpha ANCESTRAL SPECIES 293 ENSGT00940000165492.a.a ENSGT00940000154394.b.a.a.b.b ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00940000170916 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a #26 Acanthomorphata ANCESTRAL SPECIES 277 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00390000016543.d #37 ENSGT00390000000642 #35 ENSGT00940000164541 ENSGT00940000155945.i.a #33 Euacanthomorphacea ANCESTRAL SPECIES 54 ENSGT00390000001098 ENSGT00940000158633.a ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00390000016543.d #37 ENSGT00390000000642 #35 ENSGT00940000155945.i.a #33 Percomorphaceae ANCESTRAL SPECIES 42 ENSGT00390000001098 ENSGT00940000158633.a ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a Tiger tail seahorse MODERN SPECIES 414 PIP5KL1 (ENSHCOG00000002692) sh3glb2b (ENSHCOG00000002670) zer1 (ENSHCOG00000002632) TBC1D13 (ENSHCOG00000002617) thnsl2 (ENSHCOG00000002586) DQX1 (ENSHCOG00000002562) ENSHCOG00000002550 ENSHCOG00000002545 SPR (ENSHCOG00000002537) slc1a3b (ENSHCOG00000002533) nadk2 (ENSHCOG00000002523) skp2 (ENSHCOG00000002516) fpgs (ENSHCOG00000002500) #15 cdk9 (ENSHCOG00000002494) #14 ENSHCOG00000002484 #18 lrsam1 (ENSHCOG00000002467) #22 ndor1 (ENSHCOG00000002397) #23 ntmt1 (ENSHCOG00000002379) #24 ier5l (ENSHCOG00000000743) ##25 ptpa (ENSHCOG00000002362) crata (ENSHCOG00000002332) #26 ENSHCOG00000002314 ENSHCOG00000002296 Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00940000158633.a ENSGT00940000177239 ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Ovalentaria ANCESTRAL SPECIES 16 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Atherinomorphae ANCESTRAL SPECIES 28 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 ENSGT00940000166301 Cyprinodontiformes ANCESTRAL SPECIES 27 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832.j ENSGT00940000158867 ENSGT00940000166301 Aplocheiloidei ANCESTRAL SPECIES 74 ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500.h ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.b ENSGT00950000183005.a.b ENSGT00940000153832.j.a ENSGT00940000158867 Mangrove rivulus MODERN SPECIES 719 naif1 (ENSKMAG00000005632) fpgs (ENSKMAG00000005643) #15 cdk9 (ENSKMAG00000005661) #14 lmo4a (ENSKMAG00000005683) #18 lrsam1 (ENSKMAG00000005706) #22 ndor1 (ENSKMAG00000005771) #23 ntmt1 (ENSKMAG00000005816) #24 Turquoise killifish MODERN SPECIES 1611 sptan1 (ENSNFUG00015002171) DYNC2I1 (ENSNFUG00015002609) nadk2 (ENSNFUG00015002618) SLC1A3B (ENSNFUG00015002661) SPR (ENSNFUG00015002844) smyd1a (ENSNFUG00015002862) ENSNFUG00015002904 thnsl2 (ENSNFUG00015002919) TBC1D13 (ENSNFUG00015002932) ZER1 (ENSNFUG00015002969) ENSNFUG00015003041 ENSNFUG00015003046 rgs7bpb (ENSNFUG00015003052) c6 (ENSNFUG00015003065) ENSNFUG00015003092 #18 lrsam1 (ENSNFUG00015003125) #22 NTMT1 (ENSNFUG00015003262) #24 ier5l (ENSNFUG00015003268) ##25 ptpa (ENSNFUG00015003271) CRATA (ENSNFUG00015003294) #26 Nfu_g_1_018246 (ENSNFUG00015003321) THAP1 (ENSNFUG00015003323) wdr91 (ENSNFUG00015003332) ENSNFUG00015003346 MBD2 (ENSNFUG00015003349) LYZ (ENSNFUG00015003351) dcc (ENSNFUG00015003442) ENSNFUG00015003780 tdgf1 (ENSNFUG00015003782) DNAJC25 (ENSNFUG00015003783) SPIN1 (ENSNFUG00015003784) Cyprinodontoidei ANCESTRAL SPECIES 33 ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000012710.a.a ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832.j ENSGT00940000153832.k NAME_4 ANCESTRAL SPECIES 246 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 Mummichog MODERN SPECIES 548 zer1 (ENSFHEG00000004098) SH3GLB2 (ENSFHEG00000004132) ENSFHEG00000004138 PIP5KL1 (ENSFHEG00000004140) dpm2 (ENSFHEG00000004146) eeig1b (ENSFHEG00000004150) naif1 (ENSFHEG00000004160) fpgs (ENSFHEG00000004167) #15 cdk9 (ENSFHEG00000004199) #14 lmo4a (ENSFHEG00000000105) #18 lrsam1 (ENSFHEG00000004237) #22 ndor1 (ENSFHEG00000004294) #23 ntmt1 (ENSFHEG00000004248) #24 ENSFHEG00000004312 ##25 ptpa (ENSFHEG00000004350) tdgf1 (ENSFHEG00000004363) ENSFHEG00000004374 Sheepshead minnow MODERN SPECIES 926 lmo4a (ENSCVAG00000013215) #18 ENSCVAG00000013226 lrsam1 (ENSCVAG00000013278) #22 ENSCVAG00000013283 ENSCVAG00000013290 ENSCVAG00000013311 #23 ntmt1 (ENSCVAG00000013334) #24 ier5l (ENSCVAG00000013340) ##25 ptpa (ENSCVAG00000013362) crata (ENSCVAG00000013442) #26 Poeciliinae ANCESTRAL SPECIES 12 ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.b ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000012710.a.a ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832.j ENSGT00940000153832.k Poecilia ANCESTRAL SPECIES 53 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.b ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000012710.a.a ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832.j ENSGT00940000153832.k.a NAME_6 ANCESTRAL SPECIES 102 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00500000044904.a.b.e.a.l.d.b.a.b.a.a.b ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000012710.a.a ENSGT00940000153832.k.a.a ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832.j Amazon molly MODERN SPECIES 618 slc1a3b (ENSPFOG00000006996) spra (ENSPFOG00000006964) smyd1a (ENSPFOG00000006798) DQX1 (ENSPFOG00000006654) thnsl2 (ENSPFOG00000006604) TBC1D13 (ENSPFOG00000006486) zer1 (ENSPFOG00000006341) sh3glb2b (ENSPFOG00000006128) PIP5KL1 (ENSPFOG00000006087) dpm2 (ENSPFOG00000006056) eeig1b (ENSPFOG00000005838) naif1 (ENSPFOG00000005824) fpgs (ENSPFOG00000005484) #15 cdk9 (ENSPFOG00000005383) #14 ENSPFOG00000005332 #18 lrsam1 (ENSPFOG00000005042) #22 ntmt1 (ENSPFOG00000004796) #24 ndor1 (ENSPFOG00000004857) #23 ier5l (ENSPFOG00000004784) ##25 ptpa (ENSPFOG00000004582) crata (ENSPFOG00000004304) #26 ENSPFOG00000004298 june (ENSPFOG00000004290) ENSPFOG00000004261 ENSPFOG00000004257 ENSPFOG00000020727 ENSPFOG00000004171 wdr91 (ENSPFOG00000004035) ENSPFOG00000004014 ENSPFOG00000023507 ENSPFOG00000022838 Sailfin molly MODERN SPECIES 833 spra (ENSPLAG00000019573) smyd1a (ENSPLAG00000019828) DQX1 (ENSPLAG00000019886) thnsl2 (ENSPLAG00000019905) ENSPLAG00000019926 TBC1D13 (ENSPLAG00000019931) zer1 (ENSPLAG00000020003) sh3glb2b (ENSPLAG00000020064) PIP5KL1 (ENSPLAG00000020138) dpm2 (ENSPLAG00000020150) eeig1b (ENSPLAG00000020194) naif1 (ENSPLAG00000020208) fpgs (ENSPLAG00000020216) #15 cdk9 (ENSPLAG00000020266) #14 ENSPLAG00000020279 #18 lrsam1 (ENSPLAG00000020295) #22 ndor1 (ENSPLAG00000020306) #23 ntmt1 (ENSPLAG00000020317) #24 ier5l (ENSPLAG00000020321) ##25 ptpa (ENSPLAG00000020359) crata (ENSPLAG00000020394) #26 ENSPLAG00000020415 june (ENSPLAG00000020426) ENSPLAG00000020440 ENSPLAG00000020448 ENSPLAG00000020827 wdr91 (ENSPLAG00000020867) ENSPLAG00000020874 ENSPLAG00000020884 ENSPLAG00000020892 mbd2 (ENSPLAG00000020914) Platyfish MODERN SPECIES 22 DQX1 (ENSXMAG00000010692) thnsl2 (ENSXMAG00000010684) ENSXMAG00000019894 ENSXMAG00000028669 TBC1D13 (ENSXMAG00000003778) zer1 (ENSXMAG00000003783) sh3glb2b (ENSXMAG00000003791) ENSXMAG00000023087 PIP5KL1 (ENSXMAG00000029474) dpm2 (ENSXMAG00000003825) eeig1b (ENSXMAG00000028388) naif1 (ENSXMAG00000029708) fpgs (ENSXMAG00000021390) #15 cdk9 (ENSXMAG00000003838) #14 ENSXMAG00000024489 #18 lrsam1 (ENSXMAG00000017038) #22 ndor1 (ENSXMAG00000003862) #23 ntmt1 (ENSXMAG00000026764) #24 ptpa (ENSXMAG00000003872) crata (ENSXMAG00000003884) #26 ENSXMAG00000003899 june (ENSXMAG00000003906) ENSXMAG00000021919 ENSXMAG00000019552 wdr91 (ENSXMAG00000003909) ENSXMAG00000029906 ENSXMAG00000023636 mbd2 (ENSXMAG00000003932) LYZ (ENSXMAG00000011983) LYZ (ENSXMAG00000024335) dcc (ENSXMAG00000003959) Oryzias ANCESTRAL SPECIES 46 ENSGT00390000018878.s ENSGT00940000155826 ENSGT00390000003837 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT01100000263514.B ENSGT00940000161047 ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 ENSGT00940000166301 ENSGT00390000013355 Oryzias_b ANCESTRAL SPECIES 59 ENSGT00390000018878.s ENSGT00940000155826 ENSGT00390000003837 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT01100000263514.B ENSGT00940000161047 ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 ENSGT00940000166301 ENSGT00390000013355 Indian medaka MODERN SPECIES 6 slc12a2 (ENSOMEG00000004964) ENSOMEG00000004868 psmb10 (ENSOMEG00000004851) dpm2 (ENSOMEG00000004817) eeig1b (ENSOMEG00000004807) naif1 (ENSOMEG00000004782) fpgs (ENSOMEG00000004766) #15 cdk9 (ENSOMEG00000004738) #14 lmo4a (ENSOMEG00000000106) #18 lrsam1 (ENSOMEG00000004652) #22 ndor1 (ENSOMEG00000004558) #23 ntmt1 (ENSOMEG00000004532) #24 ier5l (ENSOMEG00000004513) ##25 ptpa (ENSOMEG00000004504) crata (ENSOMEG00000004481) #26 ENSOMEG00000004452 june (ENSOMEG00000004398) ENSOMEG00000004394 wdr91 (ENSOMEG00000004374) ENSOMEG00000004344 mbd2 (ENSOMEG00000004312) ENSOMEG00000004281 dcc (ENSOMEG00000004224) ENSOMEG00000004143 ENSOMEG00000004137 Javanese ricefish MODERN SPECIES 3 MAN1B1 (ENSOJAG00000020944) WHRN (ENSOJAG00000020922) stxbp1a (ENSOJAG00000019755) ENSOJAG00000019579 prrc1 (ENSOJAG00000019570) slc27a6 (ENSOJAG00000019294) slc12a2 (ENSOJAG00000016174) CENPA (ENSOJAG00000015975) nit2 (ENSOJAG00000015837) psmb10 (ENSOJAG00000015797) dpm2 (ENSOJAG00000015793) naif1 (ENSOJAG00000015783) fpgs (ENSOJAG00000015630) #15 cdk9 (ENSOJAG00000015604) #14 lmo4a (ENSOJAG00000015584) #18 lrsam1 (ENSOJAG00000015473) #22 ntmt1 (ENSOJAG00000015254) #24 ENSOJAG00000015204 ier5l (ENSOJAG00000015196) ##25 ptpa (ENSOJAG00000014551) crata (ENSOJAG00000014126) #26 ENSOJAG00000014094 june (ENSOJAG00000014082) THAP1 (ENSOJAG00000014076) wdr91 (ENSOJAG00000013925) ENSOJAG00000013870 mbd2 (ENSOJAG00000013854) LYZ (ENSOJAG00000013841) dcc (ENSOJAG00000011803) tdgf1 (ENSOJAG00000011676) dnajc25 (ENSOJAG00000011662) Oryzias_a ANCESTRAL SPECIES 61 ENSGT00390000018878.s ENSGT00940000159700 ENSGT01060000248530.C.d.x.b.a.b.a ENSGT00980000198573.a.b.ab.b.a.b.a.a.b ENSGT00940000155742.a.a ENSGT01100000263514.B ENSGT00940000161047 ENSGT00390000001098 ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 ENSGT00940000166301 ENSGT00390000013355 Japanese Medaka HdrR MODERN SPECIES 3 ENSORLG00000030052 slc27a6 (ENSORLG00000019012) ENSORLG00000026735 ENSORLG00000023947 ENSORLG00000029533 slc12a2 (ENSORLG00000019274) ENSORLG00000018301 psmb10 (ENSORLG00000018295) dpm2 (ENSORLG00000018289) ENSORLG00000025973 ENSORLG00000030325 naif1 (ENSORLG00000018283) fpgs (ENSORLG00000018278) #15 cdk9 (ENSORLG00000018273) #14 lmo4a (ENSORLG00000022702) #18 lrsam1 (ENSORLG00000025606) #22 ndor1 (ENSORLG00000020185) #23 ntmt1 (ENSORLG00000027700) #24 ier5l (ENSORLG00000026184) ##25 ptpa (ENSORLG00000018790) crata (ENSORLG00000026967) #26 ENSORLG00000023149 june (ENSORLG00000018793) ENSORLG00000028912 THAP1 (ENSORLG00000018779) wdr91 (ENSORLG00000018761) ENSORLG00000022687 ENSORLG00000027233 ENSORLG00000030536 mbd2 (ENSORLG00000024771) lyz (ENSORLG00000015344) Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Pomacentridae ANCESTRAL SPECIES 69 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00940000155122.b ENSGT00390000002172.B ENSGT00550000074853 ENSGT00550000074969 ENSGT00940000155143 ENSGT00940000153876.B ENSGT00940000157468.b ENSGT00940000165179.a ENSGT00940000156428 ENSGT00940000155101.e ENSGT00950000183174.A ENSGT00500000044909 ENSGT00950000182888.b ENSGT00950000182869.e.b.g.b ENSGT00550000074856.c.a Pomacentridae_A ANCESTRAL SPECIES 46 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00940000155122.b ENSGT00390000002172.B ENSGT00550000074853 ENSGT00550000074969 ENSGT00940000155143.g ENSGT00940000153876.B ENSGT00940000157468.b ENSGT00940000165179.a ENSGT00940000156428 ENSGT00940000155101.e ENSGT00950000183174.A ENSGT00500000044909 ENSGT00950000182888.b ENSGT00950000182869.e.b.g.b ENSGT00550000074856.c.a Amphiprion ANCESTRAL SPECIES 41 ENSGT00440000033609.w ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00940000155122.b ENSGT00390000002172.B ENSGT00550000074853 ENSGT00550000074969 ENSGT00940000155143.g ENSGT00940000153876.B ENSGT00940000157468.b ENSGT00940000165179.a ENSGT00940000156428 ENSGT00940000155101.e ENSGT00950000183174.A ENSGT00500000044909 ENSGT00950000182888.b ENSGT00950000182869.e.b.g.b ENSGT00550000074856.c.a Clown anemonefish MODERN SPECIES 1333 zfp36l2 (ENSAOCG00000011193) ENSAOCG00000011211 ENSAOCG00000011320 zer1 (ENSAOCG00000011389) sh3glb2b (ENSAOCG00000011472) ENSAOCG00000011497 PIP5KL1 (ENSAOCG00000011534) dpm2 (ENSAOCG00000002482) eeig1b (ENSAOCG00000011585) naif1 (ENSAOCG00000011604) fpgs (ENSAOCG00000011676) #15 cdk9 (ENSAOCG00000011721) #14 lmo4a (ENSAOCG00000011737) #18 lrsam1 (ENSAOCG00000011866) #22 ENSAOCG00000011912 ENSAOCG00000011927 bcl7a (ENSAOCG00000011937) eif2b1 (ENSAOCG00000011972) ddx55 (ENSAOCG00000012037) tmed2 (ENSAOCG00000002227) ptpn11a (ENSAOCG00000012109) ENSAOCG00000012135 ENSAOCG00000012158 ENSAOCG00000012246 pitpnb (ENSAOCG00000012296) NAA25 (ENSAOCG00000012402) Orange clownfish MODERN SPECIES 7 spra (ENSAPEG00000011895) smyd1a (ENSAPEG00000011859) DQX1 (ENSAPEG00000011785) thnsl2 (ENSAPEG00000011758) TBC1D13 (ENSAPEG00000011699) zer1 (ENSAPEG00000011631) sh3glb2b (ENSAPEG00000011579) ENSAPEG00000011556 PIP5KL1 (ENSAPEG00000011523) dpm2 (ENSAPEG00000011481) eeig1b (ENSAPEG00000011401) naif1 (ENSAPEG00000011390) fpgs (ENSAPEG00000011339) #15 cdk9 (ENSAPEG00000011302) #14 lmo4a (ENSAPEG00000011277) #18 lrsam1 (ENSAPEG00000011190) #22 ENSAPEG00000011148 ENSAPEG00000011133 bcl7a (ENSAPEG00000011116) eif2b1 (ENSAPEG00000011091) ddx55 (ENSAPEG00000011003) tmed2 (ENSAPEG00000010970) ptpn11a (ENSAPEG00000010912) ENSAPEG00000010874 ENSAPEG00000010853 ENSAPEG00000010598 pitpnb (ENSAPEG00000010536) NAA25 (ENSAPEG00000010428) brap (ENSAPEG00000010372) tor4aa (ENSAPEG00000010343) VDAC3 (ENSAPEG00000009693) Spiny chromis MODERN SPECIES 728 cdk9 (ENSAPOG00000012727) #14 lmo4a (ENSAPOG00000012750) #18 lrsam1 (ENSAPOG00000012933) #22 ENSAPOG00000012973 ENSAPOG00000012993 bcl7a (ENSAPOG00000012998) eif2b1 (ENSAPOG00000013060) ddx55 (ENSAPOG00000013126) ENSAPOG00000013139 tmed2 (ENSAPOG00000013173) ptpn11a (ENSAPOG00000013192) Bicolor damselfish MODERN SPECIES 732 eeig1b (ENSSPAG00000011518) naif1 (ENSSPAG00000011566) fpgs (ENSSPAG00000011573) #15 cdk9 (ENSSPAG00000011611) #14 lmo4a (ENSSPAG00000011641) #18 lrsam1 (ENSSPAG00000011656) #22 ENSSPAG00000011716 ENSSPAG00000011738 bcl7a (ENSSPAG00000011749) eif2b1 (ENSSPAG00000011769) ddx55 (ENSSPAG00000011806) tmed2 (ENSSPAG00000011863) ptpn11a (ENSSPAG00000011890) ENSSPAG00000011917 ENSSPAG00000011930 ENSSPAG00000011981 ENSSPAG00000011986 ENSSPAG00000012009 pla2g3 (ENSSPAG00000012327) ENSSPAG00000012421 Cichlidae ANCESTRAL SPECIES 10 ENSGT00390000015874 ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832.l.b ENSGT00940000153832.l.a Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526.v #15 ENSGT00390000016526.u #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832.l.b ENSGT00940000153832.l.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526.v #15 ENSGT00390000016526.u #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832.l.b ENSGT00940000153832.l.a.a ENSGT01070000255259 Haplochromini ANCESTRAL SPECIES ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526.v #15 ENSGT00390000016526.u #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832.l.b ENSGT00940000153832.l.a.a ENSGT01070000255259 Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526.v #15 ENSGT00390000016526.u #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832.l.b ENSGT00940000153832.l.a.a ENSGT01070000255259 Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00940000156114.c ENSGT00940000159579 ENSGT00940000158503 ENSGT00940000158674 ENSGT00530000063187.A ENSGT00940000155841.c.b ENSGT00940000177239 ENSGT00940000158633.a ENSGT00390000001098 ENSGT00940000156811.b ENSGT00450000040324.b.n ENSGT00390000016526.v #15 ENSGT00390000016526.u #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832.l.b ENSGT00940000153832.l.a.a ENSGT00940000158867 Eastern happy MODERN SPECIES 19 TBC1D13 (ENSACLG00000006800) zer1 (ENSACLG00000006753) ENSACLG00000006745 sh3glb2b (ENSACLG00000006671) ENSACLG00000006179 ENSACLG00000006163 ENSACLG00000006152 PIP5KL1 (ENSACLG00000006121) dpm2 (ENSACLG00000006105) eeig1b (ENSACLG00000006047) naif1 (ENSACLG00000006036) fpgs (ENSACLG00000006033) #15 fpgs (ENSACLG00000005332) #15 cdk9 (ENSACLG00000005309) #14 lmo4a (ENSACLG00000005292) #18 lrsam1 (ENSACLG00000005258) #22 ndor1 (ENSACLG00000005245) #23 ntmt1 (ENSACLG00000005237) #24 ier5l (ENSACLG00000005228) ##25 ptpa (ENSACLG00000005191) crata (ENSACLG00000005135) #26 ENSACLG00000005116 june (ENSACLG00000004863) THAP1 (ENSACLG00000004851) wdr91 (ENSACLG00000004633) ENSACLG00000004603 ENSACLG00000004553 mbd2 (ENSACLG00000004512) ENSACLG00000004493 ENSACLG00000004471 ENSACLG00000004447 Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005000411 ENSMZEG00005000452 MFSD14B (ENSMZEG00005000540) ENSMZEG00005000590 SH3GLB2 (ENSMZEG00005000613) ENSMZEG00005000666 ENSMZEG00005000684 PIP5KL1 (ENSMZEG00005000701) dpm2 (ENSMZEG00005000734) eeig1b (ENSMZEG00005000759) naif1 (ENSMZEG00005000811) fpgs (ENSMZEG00005000819) #15 fpgs (ENSMZEG00005000864) #15 cdk9 (ENSMZEG00005000879) #14 lmo4a (ENSMZEG00005000933) #18 lrsam1 (ENSMZEG00005000954) #22 ndor1 (ENSMZEG00005000971) #23 ntmt1 (ENSMZEG00005001015) #24 ier5l (ENSMZEG00005001033) ##25 ptpa (ENSMZEG00005001052) crata (ENSMZEG00005001100) #26 ENSMZEG00005001143 june (ENSMZEG00005001171) THAP1 (ENSMZEG00005001180) wdr91 (ENSMZEG00005001192) ENSMZEG00005001285 ENSMZEG00005001314 mbd2 (ENSMZEG00005001327) ENSMZEG00005001330 ENSMZEG00005001335 ENSMZEG00005001376 P. nyererei MODERN SPECIES 510 slc25a46 (ENSPNYG00000002943) smyd1a (ENSPNYG00000002989) DQX1 (ENSPNYG00000003028) thnsl2 (ENSPNYG00000003073) TBC1D13 (ENSPNYG00000003093) zer1 (ENSPNYG00000003143) sh3glb2b (ENSPNYG00000003195) PIP5KL1 (ENSPNYG00000003225) dpm2 (ENSPNYG00000003261) eeig1b (ENSPNYG00000003268) naif1 (ENSPNYG00000003306) fpgs (ENSPNYG00000003313) #15 fpgs (ENSPNYG00000003360) #15 cdk9 (ENSPNYG00000003380) #14 lmo4a (ENSPNYG00000003413) #18 lrsam1 (ENSPNYG00000003428) #22 ndor1 (ENSPNYG00000003460) #23 ntmt1 (ENSPNYG00000003502) #24 ier5l (ENSPNYG00000003521) ##25 ptpa (ENSPNYG00000003541) crata (ENSPNYG00000003559) #26 june (ENSPNYG00000003606) wdr91 (ENSPNYG00000003630) ENSPNYG00000003768 ENSPNYG00000003797 mbd2 (ENSPNYG00000003862) ENSPNYG00000003876 LYZ (ENSPNYG00000003993) Burton s mouthbrooder MODERN SPECIES 754 PIP5KL1 (ENSHBUG00000013098) dpm2 (ENSHBUG00000013111) eeig1b (ENSHBUG00000000381) naif1 (ENSHBUG00000013136) fpgs (ENSHBUG00000013150) #15 fpgs (ENSHBUG00000013217) #15 cdk9 (ENSHBUG00000013248) #14 lmo4a (ENSHBUG00000013261) #18 lrsam1 (ENSHBUG00000013284) #22 ndor1 (ENSHBUG00000013403) #23 ntmt1 (ENSHBUG00000000896) #24 ier5l (ENSHBUG00000013436) ##25 ptpa (ENSHBUG00000013456) crata (ENSHBUG00000013537) #26 Lyretail cichlid MODERN SPECIES 293 smyd1a (ENSNBRG00000004984) DQX1 (ENSNBRG00000004923) thnsl2 (ENSNBRG00000004851) TBC1D13 (ENSNBRG00000004799) zer1 (ENSNBRG00000004749) sh3glb2b (ENSNBRG00000004469) ENSNBRG00000004435 PIP5KL1 (ENSNBRG00000004412) dpm2 (ENSNBRG00000004395) eeig1b (ENSNBRG00000004359) naif1 (ENSNBRG00000004348) fpgs (ENSNBRG00000004308) #15 ENSNBRG00000004289 cdk9 (ENSNBRG00000004264) #14 lmo4a (ENSNBRG00000004243) #18 lrsam1 (ENSNBRG00000004227) #22 ndor1 (ENSNBRG00000004126) #23 ntmt1 (ENSNBRG00000004094) #24 ier5l (ENSNBRG00000004082) ##25 ptpa (ENSNBRG00000004046) crata (ENSNBRG00000004003) #26 june (ENSNBRG00000003993) THAP1 (ENSNBRG00000003980) wdr91 (ENSNBRG00000003866) ENSNBRG00000003844 ENSNBRG00000003802 mbd2 (ENSNBRG00000003778) ENSNBRG00000003763 ENSNBRG00000003738 ENSNBRG00000003728 ENSNBRG00000003714 Nile tilapia MODERN SPECIES 19 DQX1 (ENSONIG00000012572) thnsl2 (ENSONIG00000012575) TBC1D13 (ENSONIG00000012577) zer1 (ENSONIG00000012579) sh3glb2b (ENSONIG00000012581) ENSONIG00000027572 ENSONIG00000038791 pip5kl1 (ENSONIG00000012586) dpm2 (ENSONIG00000035554) eeig1b (ENSONIG00000012588) naif1 (ENSONIG00000012590) fpgs (ENSONIG00000029434) #15 fpgs (ENSONIG00000012592) #15 cdk9 (ENSONIG00000012601) #14 lmo4a (ENSONIG00000040483) #18 lrsam1 (ENSONIG00000012605) #22 ndor1 (ENSONIG00000012608) #23 ntmt1 (ENSONIG00000039468) #24 ier5l (ENSONIG00000032937) ##25 ptpa (ENSONIG00000012613) crata (ENSONIG00000012615) #26 ENSONIG00000012618 june (ENSONIG00000021050) ENSONIG00000034332 THAP1 (ENSONIG00000012619) ENSONIG00000031508 wdr91 (ENSONIG00000012620) ENSONIG00000031827 ENSONIG00000012632 mbd2 (ENSONIG00000012635) ENSONIG00000012636 Midas cichlid MODERN SPECIES 375 mbd2 (ENSACIG00000012586) ENSACIG00000012566 ENSACIG00000012549 wdr91 (ENSACIG00000012507) THAP1 (ENSACIG00000012499) june (ENSACIG00000012491) crata (ENSACIG00000012461) #26 ptpa (ENSACIG00000012436) ier5l (ENSACIG00000012426) ##25 ntmt1 (ENSACIG00000012412) #24 ndor1 (ENSACIG00000012373) #23 fpgs (ENSACIG00000012228) #15 cdk9 (ENSACIG00000012171) #14 ENSACIG00000012158 lmo4a (ENSACIG00000012145) #18 lrsam1 (ENSACIG00000011986) #22 naif1 (ENSACIG00000011963) eeig1b (ENSACIG00000011939) dpm2 (ENSACIG00000011902) PIP5KL1 (ENSACIG00000011884) Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00940000158633.a ENSGT00940000177239 ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Eupercaria ANCESTRAL SPECIES 13 ENSGT00940000158633.a ENSGT00940000177239 ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Tetraodontidae ANCESTRAL SPECIES 177 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000159383 ENSGT00390000001566 Fugu MODERN SPECIES 18 ddx21 (ENSTRUG00000017570) lrsam1 (ENSTRUG00000000726) #22 ndor1 (ENSTRUG00000007332) #23 ENSTRUG00000031347 ntmt1 (ENSTRUG00000007291) #24 ier5l (ENSTRUG00000007279) ##25 ptpa (ENSTRUG00000007171) crata (ENSTRUG00000030328) #26 THAP1 (ENSTRUG00000023030) wdr91 (ENSTRUG00000006084) ENSTRUG00000006045 htr1a-B (ENSTRUG00000005939) ENSTRUG00000029564 spp1 (ENSTRUG00000005889) ENSTRUG00000005580 vldlr (ENSTRUG00000004731) pum3 (ENSTRUG00000004074) Tetraodon MODERN SPECIES 26 ADGRD2 (ENSTNIG00000010589) nr5a1a (ENSTNIG00000010588) #8 nr6a1a (ENSTNIG00000010587) TCF4 (ENSTNIG00000010330) ENSTNIG00000010329 RAB27B (ENSTNIG00000010328) BRCC3 (ENSTNIG00000010327) ENSTNIG00000010326 pum3 (ENSTNIG00000010325) KCNV2 (ENSTNIG00000010324) cables1 (ENSTNIG00000010323) vldlr (ENSTNIG00000010322) ENSTNIG00000007214 spp1 (ENSTNIG00000000575) ENSTNIG00000007213 lrsam1 (ENSTNIG00000007212) #22 ndor1 (ENSTNIG00000007211) #23 ntmt1 (ENSTNIG00000007210) #24 ier5l (ENSTNIG00000007209) ##25 ptpa (ENSTNIG00000007208) crata (ENSTNIG00000007207) #26 abcc9 (ENSTNIG00000006479) kcnj8 (ENSTNIG00000006480) ECHDC3 (ENSTNIG00000001958) ENSTNIG00000006482 ENSTNIG00000001329 ENSTNIG00000006484 ENSTNIG00000006485 cand1 (ENSTNIG00000006486) rab21 (ENSTNIG00000002501) ENSTNIG00000002500 Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00940000158633.a ENSGT00940000177239 ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00940000158633.a ENSGT00940000177239 ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00410000029051 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00390000001098 ENSGT00940000158633.a ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 ENSGT00940000166301 Gilthead seabream MODERN SPECIES 3 PIP5KL1 (ENSSAUG00010024431) ENSSAUG00010024432 sh3glb2b (ENSSAUG00010024434) zer1 (ENSSAUG00010024446) TBC1D13 (ENSSAUG00010024460) thnsl2 (ENSSAUG00010024480) DQX1 (ENSSAUG00010024484) smyd1a (ENSSAUG00010024497) spra (ENSSAUG00010024499) slc1a3b (ENSSAUG00010024506) nadk2 (ENSSAUG00010008240) skp2 (ENSSAUG00010008241) fpgs (ENSSAUG00010008251) #15 cdk9 (ENSSAUG00010008375) #14 lmo4a (ENSSAUG00010008377) #18 lrsam1 (ENSSAUG00010008390) #22 ENSSAUG00010008592 ndor1 (ENSSAUG00010008605) #23 ccni (ENSSAUG00010008613) ccng2 (ENSSAUG00010008615) ENSSAUG00010008620 WDR7 (ENSSAUG00010008641) st8sia3 (ENSSAUG00010008655) ONECUT2 (ENSSAUG00010008656) fech (ENSSAUG00010008663) NARS1 (ENSSAUG00010008963) ENSSAUG00010009276 txnl1 (ENSSAUG00010009280) ATP8B1 (ENSSAUG00010009328) ENSSAUG00010011918 ENSSAUG00010011919 Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00390000001098 ENSGT00940000158633.a ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 ENSGT00940000166301 European seabass MODERN SPECIES 9 PIP5KL1 (ENSDLAG00005028420) ENSDLAG00005014170 ENSDLAG00005014115 ENSDLAG00005014089 ENSDLAG00005014084 ENSDLAG00005014014 ENSDLAG00005013885 ENSDLAG00005013882 ENSDLAG00005028733 SLC1A3 (ENSDLAG00005013579) ENSDLAG00005029405 SKP2 (ENSDLAG00005013313) ENSDLAG00005012340 #15 ENSDLAG00005012294 #14 ENSDLAG00005034406 #18 ENSDLAG00005012016 #22 ndor1 (ENSDLAG00005011955) #23 ntmt1 (ENSDLAG00005035033) #24 ier5l (ENSDLAG00005011922) ##25 ptpa (ENSDLAG00005011041) crata (ENSDLAG00005010222) #26 ENSDLAG00005010160 ENSDLAG00005031835 ENSDLAG00005031673 ENSDLAG00005009496 ENSDLAG00005009483 ENSDLAG00005009449 ENSDLAG00005009443 ENSDLAG00005009436 ENSDLAG00005009427 ENSDLAG00005006417 Large yellow croaker MODERN SPECIES 3 sh3glb2b (ENSLCRG00005006820) zer1 (ENSLCRG00005006471) ENSLCRG00005006468 TBC1D13 (ENSLCRG00005006449) thnsl2 (ENSLCRG00005006447) DQX1 (ENSLCRG00005006442) smyd1a (ENSLCRG00005006401) spra (ENSLCRG00005006399) slc1a3b (ENSLCRG00005005653) nadk2 (ENSLCRG00005005568) skp2 (ENSLCRG00005005561) ENSLCRG00005005559 fpgs (ENSLCRG00005004481) #15 cdk9 (ENSLCRG00005004464) #14 lmo4a (ENSLCRG00005004463) #18 lrsam1 (ENSLCRG00005004452) #22 ndor1 (ENSLCRG00005004441) #23 ntmt1 (ENSLCRG00005004436) #24 ier5l (ENSLCRG00005004434) ##25 ptpa (ENSLCRG00005004313) crata (ENSLCRG00005003501) #26 ENSLCRG00005003490 ENSLCRG00005003488 june (ENSLCRG00005003487) THAP1 (ENSLCRG00005003486) wdr91 (ENSLCRG00005003447) ENSLCRG00005003443 ENSLCRG00005003441 ENSLCRG00005003440 ENSLCRG00005003439 ENSLCRG00005003438 Perciformes ANCESTRAL SPECIES 32 ENSGT00940000158633.a ENSGT00940000177239 ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526.n #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 Cottioidei ANCESTRAL SPECIES 31 ENSGT00390000001098 ENSGT00940000158633.a ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526.n #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00390000018878 ENSGT00940000155826 ENSGT00390000006096.a.b ENSGT00940000157006 ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000155603.A.a.a.a ENSGT00950000183162.b ENSGT00390000005646 Lumpfish MODERN SPECIES 3 ENSCLMG00005018415 ENSCLMG00005018417 TCF4 (ENSCLMG00005018420) ENSCLMG00005018422 ATP8B1 (ENSCLMG00005018432) txnl1 (ENSCLMG00005018678) NARS1 (ENSCLMG00005018686) fech (ENSCLMG00005018869) ONECUT2 (ENSCLMG00005018908) st8sia3 (ENSCLMG00005018909) WDR7 (ENSCLMG00005018918) ENSCLMG00005020669 ccng2 (ENSCLMG00005020672) ccni (ENSCLMG00005020674) lmo4a (ENSCLMG00005020679) #18 lrsam1 (ENSCLMG00005020684) #22 ndor1 (ENSCLMG00005020688) #23 ENSCLMG00005020695 ntmt1 (ENSCLMG00005020697) #24 ier5l (ENSCLMG00005020699) ##25 ptpa (ENSCLMG00005020704) crata (ENSCLMG00005020796) #26 psmb10 (ENSCLMG00005021200) selenoh (ENSCLMG00005021219) dcp2 (ENSCLMG00005021220) YTHDC2 (ENSCLMG00005021223) hmgcs1 (ENSCLMG00005021505) tln1 (ENSCLMG00005021513) tpm2 (ENSCLMG00005021661) ENSCLMG00005021686 PURG (ENSCLMG00005021708) Stickleback MODERN SPECIES 13 dpm2 (ENSGACG00000018462) PIP5KL1 (ENSGACG00000018468) sh3glb2b (ENSGACG00000018470) zer1 (ENSGACG00000018482) TBC1D13 (ENSGACG00000018486) thnsl2 (ENSGACG00000018492) DQX1 (ENSGACG00000018495) ENSGACG00000018499 spra (ENSGACG00000018502) slc1a3b (ENSGACG00000018505) nadk2 (ENSGACG00000018510) skp2 (ENSGACG00000018512) fpgs (ENSGACG00000018515) #15 cdk9 (ENSGACG00000018517) #14 lmo4a (ENSGACG00000018520) #18 lrsam1 (ENSGACG00000018522) #22 ndor1 (ENSGACG00000018526) #23 ntmt1 (ENSGACG00000018531) #24 ier5l (ENSGACG00000018536) ##25 ENSGACG00000018537 ptpa (ENSGACG00000018538) crata (ENSGACG00000018549) #26 psmb10 (ENSGACG00000018551) selenoh (ENSGACG00000018561) dcp2 (ENSGACG00000018562) YTHDC2 (ENSGACG00000018569) ENSGACG00000018573 hmgcs1 (ENSGACG00000018575) tln1 (ENSGACG00000018584) ENSGACG00000018599 ENSGACG00000018619 Perciformes_a ANCESTRAL SPECIES 12 ENSGT00940000158633.a ENSGT00940000177239 ENSGT00940000155841.c.b ENSGT00530000063187.A ENSGT00940000158674 ENSGT00940000158503 ENSGT00940000159579 ENSGT00940000156114.c ENSGT00440000033609.w ENSGT00940000155464.a.a ENSGT00390000006320 ENSGT00390000007918 ENSGT00390000016526.n #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000161047 ENSGT01100000263514.B ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Channel bull blenny MODERN SPECIES 3 naif1 (ENSCGOG00000012773) eeig1b (ENSCGOG00000012777) dpm2 (ENSCGOG00000012801) PIP5KL1 (ENSCGOG00000012803) ENSCGOG00000012805 sh3glb2b (ENSCGOG00000012822) zer1 (ENSCGOG00000013452) TBC1D13 (ENSCGOG00000013802) thnsl2 (ENSCGOG00000013935) DQX1 (ENSCGOG00000013940) smyd1a (ENSCGOG00000014145) spra (ENSCGOG00000014209) ENSCGOG00000014211 #15 cdk9 (ENSCGOG00000014213) #14 lmo4a (ENSCGOG00000014283) #18 lrsam1 (ENSCGOG00000014289) #22 ndor1 (ENSCGOG00000014319) #23 ntmt1 (ENSCGOG00000014621) #24 ENSCGOG00000014624 crata (ENSCGOG00000014637) #26 psmb10 (ENSCGOG00000014791) selenoh (ENSCGOG00000014888) hmgcs1 (ENSCGOG00000014891) YTHDC2 (ENSCGOG00000015029) dcp2 (ENSCGOG00000015554) ENSCGOG00000015559 tln1 (ENSCGOG00000015596) tpm2 (ENSCGOG00000016377) ENSCGOG00000017031 PURG (ENSCGOG00000017041) slc38a9 (ENSCGOG00000017060) Pike perch MODERN SPECIES 72 PIP5KL1 (ENSSLUG00000020888) ENSSLUG00000020886 SH3GLB2 (ENSSLUG00000020861) zer1 (ENSSLUG00000020829) TBC1D13 (ENSSLUG00000020760) thnsl2 (ENSSLUG00000020748) DQX1 (ENSSLUG00000020733) smyd1a (ENSSLUG00000020688) spra (ENSSLUG00000020673) slc1a3b (ENSSLUG00000020645) nadk2 (ENSSLUG00000020541) skp2 (ENSSLUG00000020494) fpgs (ENSSLUG00000020407) #15 cdk9 (ENSSLUG00000020382) #14 lmo4a (ENSSLUG00000020373) #18 lrsam1 (ENSSLUG00000020347) #22 ephx2 (ENSSLUG00000020321) ndor1 (ENSSLUG00000020299) #23 ntmt1 (ENSSLUG00000020286) #24 ptpa (ENSSLUG00000020164) crata (ENSSLUG00000018451) #26 THAP1 (ENSSLUG00000018388) wdr91 (ENSSLUG00000018356) cmlc1 (ENSSLUG00000018335) ENSSLUG00000018327 ENSSLUG00000018322 mbd2 (ENSSLUG00000018319) ENSSLUG00000018311 dcc (ENSSLUG00000018221) tdgf1 (ENSSLUG00000018203) dcp2 (ENSSLUG00000018195) Ballan wrasse MODERN SPECIES 140 sh3glb2b (ENSLBEG00000020325) zer1 (ENSLBEG00000020358) TBC1D13 (ENSLBEG00000020403) thnsl2 (ENSLBEG00000020440) DQX1 (ENSLBEG00000020503) smyd1a (ENSLBEG00000020550) spra (ENSLBEG00000020590) SPR (ENSLBEG00000020615) slc1a3b (ENSLBEG00000020724) nadk2 (ENSLBEG00000020935) skp2 (ENSLBEG00000020985) fpgs (ENSLBEG00000021069) #15 fpgs (ENSLBEG00000021120) #15 cdk9 (ENSLBEG00000021233) #14 lmo4a (ENSLBEG00000021265) #18 lrsam1 (ENSLBEG00000021288) #22 ndor1 (ENSLBEG00000021358) #23 ENSLBEG00000021410 ntmt1 (ENSLBEG00000021434) #24 ier5l (ENSLBEG00000021453) ##25 ptpa (ENSLBEG00000021472) crata (ENSLBEG00000021525) #26 ENSLBEG00000021603 ENSLBEG00000021654 june (ENSLBEG00000021660) THAP1 (ENSLBEG00000021675) wdr91 (ENSLBEG00000021696) ENSLBEG00000021803 ENSLBEG00000021847 mbd2 (ENSLBEG00000021918) LYZ (ENSLBEG00000022005) Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000157006 ENSGT00390000006096.a.b ENSGT00940000155826 ENSGT00390000018878 ENSGT01100000263514.B ENSGT00940000161047 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 ENSGT00940000166301 Anabantaria ANCESTRAL SPECIES 12 ENSGT00940000156510.h ENSGT00940000157326 ENSGT00390000005646 ENSGT00950000183162.b ENSGT00940000155603.A.a.a.a ENSGT01030000234542.b.b.a.a.a.a ENSGT00940000157006 ENSGT00390000006096.a.b ENSGT00940000155826 ENSGT00390000018878 ENSGT01100000263514.B ENSGT00940000161047 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00940000170723 ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832 ENSGT00940000158867 Anabantoidei ANCESTRAL SPECIES 16 ENSGT00390000016543.d #37 ENSGT00390000000642 #35 ENSGT00940000155945.i.a #33 ENSGT00940000157955.d.a #32 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157419 #9 ENSGT00940000159990 #10 ENSGT00940000156261 #12 ENSGT00940000155152.e ENSGT00930000151016 ENSGT00940000155946.c.b #30 ENSGT00940000154079.b ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00940000165259.a ENSGT00940000165922 ENSGT00940000159383 ENSGT00390000001566 ENSGT00940000155053.c.b ENSGT00390000008823 ENSGT00950000183005.a.b ENSGT00940000153832.q.b ENSGT00940000158867 ENSGT00940000166301 Climbing perch MODERN SPECIES 13 MAPKAP1 (ENSATEG00000008149) #35 ENSATEG00000008106 ENSATEG00000008045 #33 lmx1ba (ENSATEG00000007999) #32 nr5a1b (ENSATEG00000007969) #8 psmb7 (ENSATEG00000007952) #9 NEK6 (ENSATEG00000007927) #10 DENND1A (ENSATEG00000007883) #12 ENSATEG00000007815 ENSATEG00000007783 ENSATEG00000007750 #30 ENSATEG00000007664 ENSATEG00000007646 #15 ENSATEG00000007615 #14 ENSATEG00000007603 #18 ENSATEG00000007592 #22 ENSATEG00000007582 ndor1 (ENSATEG00000007563) #23 ntmt1 (ENSATEG00000027633) #24 ier5l (ENSATEG00000007529) ##25 ptpa (ENSATEG00000007512) crata (ENSATEG00000007460) #26 ENSATEG00000007448 ENSATEG00000027749 ENSATEG00000007422 ENSATEG00000007412 ENSATEG00000007407 ENSATEG00000007390 ENSATEG00000007384 ENSATEG00000007353 ENSATEG00000007333 Siamese fighting fish MODERN SPECIES 3 nr5a1b (ENSBSLG00000005504) #8 ENSBSLG00000005245 psmb7 (ENSBSLG00000005008) #9 ENSBSLG00000004979 psmb7 (ENSBSLG00000004898) #9 NEK6 (ENSBSLG00000004787) #10 DENND1A (ENSBSLG00000003940) #12 ENSBSLG00000003653 ENSBSLG00000003591 fbxw2 (ENSBSLG00000003103) ENSBSLG00000003100 #30 ralgps1 (ENSBSLG00000002736) fpgs (ENSBSLG00000002339) #15 cdk9 (ENSBSLG00000016348) #14 ENSBSLG00000016346 #18 lrsam1 (ENSBSLG00000016179) #22 ntmt1 (ENSBSLG00000016150) #24 ndor1 (ENSBSLG00000016095) #23 ier5l (ENSBSLG00000016084) ##25 ptpa (ENSBSLG00000016037) crata (ENSBSLG00000015528) #26 ENSBSLG00000015475 june (ENSBSLG00000015470) THAP1 (ENSBSLG00000015443) wdr91 (ENSBSLG00000015360) ENSBSLG00000015334 ENSBSLG00000015225 mbd2 (ENSBSLG00000015165) ENSBSLG00000015009 ENSBSLG00000015000 dcc (ENSBSLG00000013484) Zig-zag eel MODERN SPECIES 3 ENSMAMG00000022597 ENSMAMG00000022595 ENSMAMG00000026803 ENSMAMG00000022593 tpm2 (ENSMAMG00000020182) ENSMAMG00000019858 hmgcs1 (ENSMAMG00000019246) ENSMAMG00000019193 ENSMAMG00000019169 ENSMAMG00000019154 ENSMAMG00000019146 ENSMAMG00000019127 ENSMAMG00000019094 #15 ENSMAMG00000019076 #14 ENSMAMG00000027368 #18 ENSMAMG00000019051 #22 ndor1 (ENSMAMG00000019018) #23 ntmt1 (ENSMAMG00000025652) #24 ptpa (ENSMAMG00000018951) crata (ENSMAMG00000018889) #26 ENSMAMG00000018881 ENSMAMG00000018872 ENSMAMG00000018864 ENSMAMG00000018833 ENSMAMG00000018820 ENSMAMG00000018813 ENSMAMG00000018791 ENSMAMG00000018776 ENSMAMG00000026448 ENSMAMG00000018694 ENSMAMG00000028237 Carangaria ANCESTRAL SPECIES 51 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 Carangaria_A ANCESTRAL SPECIES 172 ENSGT00930000151044 #22 ENSGT00390000016526 #15 Barramundi perch MODERN SPECIES 228 ENSLCAG00010011306 AJM1 (ENSLCAG00010011310) #37 MAPKAP1 (ENSLCAG00010011315) #35 lrsam1 (ENSLCAG00010011325) #22 fpgs (ENSLCAG00010011346) #15 skp2 (ENSLCAG00010011351) nadk2 (ENSLCAG00010011358) slc1a3b (ENSLCAG00010011379) spra (ENSLCAG00010011388) smyd1a (ENSLCAG00010011416) zer1 (ENSLCAG00010011470) TBC1D13 (ENSLCAG00010011679) thnsl2 (ENSLCAG00010011728) DQX1 (ENSLCAG00010011740) macir (ENSLCAG00010011742) cdk9 (ENSLCAG00010011745) #14 sptlc1 (ENSLCAG00010011757) ROR2 (ENSLCAG00010011848) ENSLCAG00010011858 Seriola ANCESTRAL SPECIES 33 ENSGT00940000165259.a ENSGT01060000248556.A.a.a.a.b.a.a #26 ENSGT00390000011500 ENSGT00900000141021.b.a.d ##25 ENSGT00390000008371.b #24 ENSGT00930000151050 #23 ENSGT00940000157703 ENSGT00550000074872 ENSGT00940000153947.A ENSGT00940000160540 ENSGT00940000157484 ENSGT00940000156579 ENSGT00940000159053 ENSGT00940000157873 ENSGT00940000155373 #14 ENSGT00930000151044 #22 ENSGT00390000016526 #15 ENSGT00940000161073 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000157199 ENSGT00940000159700 ENSGT00940000155742.a.a ENSGT00530000063851.b ENSGT00390000016543.d #37 ENSGT00390000000642 #35 ENSGT00940000155945.i.a #33 ENSGT00940000157955.d.a #32 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157419 #9 ENSGT00940000159990 #10 Greater amberjack MODERN SPECIES 34 crata (ENSSDUG00000017943) #26 ptpa (ENSSDUG00000017976) ier5l (ENSSDUG00000018004) ##25 ntmt1 (ENSSDUG00000018008) #24 ndor1 (ENSSDUG00000018034) #23 megf10 (ENSSDUG00000018089) sptlc1 (ENSSDUG00000018182) SPTLC1 (ENSSDUG00000018250) ROR2 (ENSSDUG00000018268) nfil3 (ENSSDUG00000018281) auh (ENSSDUG00000018285) chd1 (ENSSDUG00000018314) syk (ENSSDUG00000018454) reep5 (ENSSDUG00000018646) cdk9 (ENSSDUG00000018668) #14 lrsam1 (ENSSDUG00000018693) #22 fpgs (ENSSDUG00000018783) #15 ENSSDUG00000018810 prrc1 (ENSSDUG00000018839) CTXN3 (ENSSDUG00000018881) lmnb1 (ENSSDUG00000018889) slc27a6 (ENSSDUG00000018919) slc12a2 (ENSSDUG00000018956) ENSSDUG00000019093 AJM1 (ENSSDUG00000019112) #37 MAPKAP1 (ENSSDUG00000019126) #35 mvb12ba (ENSSDUG00000019178) #33 lmx1ba (ENSSDUG00000019211) #32 nr5a1b (ENSSDUG00000019262) #8 psmb7 (ENSSDUG00000019641) #9 NEK6 (ENSSDUG00000019649) #10 Yellowtail amberjack MODERN SPECIES 3288 crata (ENSSLDG00000016827) #26 ptpa (ENSSLDG00000016869) ier5l (ENSSLDG00000016892) ##25 ntmt1 (ENSSLDG00000016905) #24 ENSSLDG00000016925 ndor1 (ENSSLDG00000016940) #23 megf10 (ENSSLDG00000017014) sptlc1 (ENSSLDG00000017078) ROR2 (ENSSLDG00000017159) nfil3 (ENSSLDG00000017192) auh (ENSSLDG00000017201) chd1 (ENSSLDG00000017244) syk (ENSSLDG00000017375) reep5 (ENSSLDG00000017457) cdk9 (ENSSLDG00000017475) #14 lrsam1 (ENSSLDG00000017500) #22 fpgs (ENSSLDG00000017557) #15 ENSSLDG00000017582 ENSSLDG00000017594 prrc1 (ENSSLDG00000017603) CTXN3 (ENSSLDG00000017620) lmnb1 (ENSSLDG00000017637) slc27a6 (ENSSLDG00000017700) slc12a2 (ENSSLDG00000018176) ENSSLDG00000021597 AJM1 (ENSSLDG00000021604) #37 MAPKAP1 (ENSSLDG00000021610) #35 ENSSLDG00000021650 mvb12ba (ENSSLDG00000021657) #33 lmx1ba (ENSSLDG00000021678) #32 nr5a1b (ENSSLDG00000021687) #8 Pleuronectoidei ANCESTRAL SPECIES 132 ENSGT00390000016526 #15 ENSGT00940000155373 #14 ENSGT00940000164907.b.b #18 ENSGT00930000151044 #22 ENSGT00940000155782 Tongue sole MODERN SPECIES 5 ENSCSEG00000010452 retreg2 (ENSCSEG00000010438) mdh1b (ENSCSEG00000010427) ENSCSEG00000010396 cd28 (ENSCSEG00000010375) raph1b (ENSCSEG00000010358) raph1b (ENSCSEG00000010351) alg11 (ENSCSEG00000010341) cpb2 (ENSCSEG00000010303) zc3h13 (ENSCSEG00000010275) rpl31 (ENSCSEG00000010181) chst10 (ENSCSEG00000010162) MAP4K4 (ENSCSEG00000010125) ENSCSEG00000010073 abcc4 (ENSCSEG00000010028) lrsam1 (ENSCSEG00000009942) #22 actr1b (ENSCSEG00000009917) cdk9 (ENSCSEG00000009903) #14 fpgs (ENSCSEG00000009878) #15 reep5 (ENSCSEG00000009866) sptlc1 (ENSCSEG00000009841) auh (ENSCSEG00000009830) nfil3 (ENSCSEG00000009825) ROR2 (ENSCSEG00000009796) syk (ENSCSEG00000009733) chd1 (ENSCSEG00000009553) megf10 (ENSCSEG00000009495) pmpcb (ENSCSEG00000009485) ENSCSEG00000009468 #12 prrc1 (ENSCSEG00000009455) fbxw2 (ENSCSEG00000009422) Turbot MODERN SPECIES 16 ENSSMAG00000007548 #37 ENSSMAG00000007499 #35 ENSSMAG00000007390 sptlc1 (ENSSMAG00000007339) ROR2 (ENSSMAG00000007314) nfil3 (ENSSMAG00000007302) auh (ENSSMAG00000007280) syk (ENSSMAG00000007199) ENSSMAG00000014929 ENSSMAG00000006988 ENSSMAG00000006975 ENSSMAG00000006929 #15 ENSSMAG00000006862 #14 ENSSMAG00000006823 ENSSMAG00000006800 #18 ENSSMAG00000006742 #22 ENSSMAG00000006702 ENSSMAG00000006696 ckma (ENSSMAG00000006685) ENSSMAG00000006616 ENSSMAG00000006566 ppp1r14aa (ENSSMAG00000006554) dlb (ENSSMAG00000006534) zgc:153990 (ENSSMAG00000006509) capns1a (ENSSMAG00000006492) nova1 (ENSSMAG00000006485) ENSSMAG00000006441 Otx5 (ENSSMAG00000006403) ENSSMAG00000006379 ENSSMAG00000006246 VPS26B (ENSSMAG00000006221) Pinecone sodierfish MODERN SPECIES 3 dpm2 (ENSMMDG00005001197) PIP5KL1 (ENSMMDG00005001215) sh3glb2b (ENSMMDG00005001246) zer1 (ENSMMDG00005001304) TBC1D13 (ENSMMDG00005001336) thnsl2 (ENSMMDG00005001365) DQX1 (ENSMMDG00005001377) smyd1a (ENSMMDG00005001394) spra (ENSMMDG00005001403) slc1a3b (ENSMMDG00005001407) nadk2 (ENSMMDG00005001427) skp2 (ENSMMDG00005001483) fpgs (ENSMMDG00005001587) #15 cdk9 (ENSMMDG00005003506) #14 lmo4a (ENSMMDG00005003518) #18 lrsam1 (ENSMMDG00005003533) #22 ndor1 (ENSMMDG00005003596) #23 ntmt1 (ENSMMDG00005003721) #24 ier5l (ENSMMDG00005003728) ##25 ptpa (ENSMMDG00005003748) crata (ENSMMDG00005003884) #26 AJM1 (ENSMMDG00005006679) #37 ENSMMDG00005006683 MAPKAP1 (ENSMMDG00005006687) #35 mvb12ba (ENSMMDG00005006693) #33 lmx1ba (ENSMMDG00005006698) #32 zbtb43 (ENSMMDG00005006700) #31 ralgps1 (ENSMMDG00005006729) angptl2a (ENSMMDG00005008993) #30 fbxw2 (ENSMMDG00005009051) ENSMMDG00005009053 ##13 Cod MODERN SPECIES 17 ENSGMOG00000025503 ENSGMOG00000008971 SLC1A3 (ENSGMOG00000008977) ENSGMOG00000008985 SKP2 (ENSGMOG00000009001) ENSGMOG00000009024 #15 ENSGMOG00000029740 ENSGMOG00000027524 ENSGMOG00000035806 ENSGMOG00000025987 ENSGMOG00000026131 ENSGMOG00000025508 ENSGMOG00000034408 #14 ENSGMOG00000009048 #15 ENSGMOG00000022601 #18 ENSGMOG00000006861 #22 ndor1 (ENSGMOG00000006885) #23 ntmt1 (ENSGMOG00000006905) #24 ier5l (ENSGMOG00000026752) ##25 ptpa (ENSGMOG00000003931) crata (ENSGMOG00000003957) #26 ENSGMOG00000028462 #37 MAPKAP1 (ENSGMOG00000011512) #35 ENSGMOG00000011501 #33 lmx1ba (ENSGMOG00000008005) #32 ENSGMOG00000033207 ENSGMOG00000037116 ENSGMOG00000007991 ENSGMOG00000023628 srsf9 (ENSGMOG00000007980) ENSGMOG00000033435 Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00940000154645.B #28 ENSGT00940000160451 #27 ENSGT00390000016526 #15 ENSGT00390000008042.B.p ENSGT01100000263515.a.b.a.b.b.k.a.a.b ENSGT00390000008042.B.o ENSGT00390000020276 #16 ENSGT00940000154394.b.a.a.a.a.a.b ENSGT00620000089226 ENSGT00940000165492.a.a ENSGT00940000154394.b.a.a.b.b ENSGT00940000164907.b.b #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00940000165492.b ENSGT00940000154394.a.e.b ENSGT01090000260003.a.b.b.a.a.a.a ENSGT00940000164907.b.a ##18 ENSGT00940000155151.a.a.a #19 ENSGT00530000064286 ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d ##25 ENSGT00390000011500 ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000155373 #14 ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000156261 #12 ENSGT00940000158540 #11 Salmoninae ANCESTRAL SPECIES 134 ENSGT00390000016526 #15 ENSGT00390000020276.lb #16 ENSGT00940000154394.b.a.a.a.a.a.b ENSGT00620000089226 ENSGT00940000164907.b.a.c ##18 ENSGT00940000155151.a.a.a.d #19 ENSGT00940000154394.b.a.b.q ENSGT00980000199397.a ENSGT00390000004692.d.a.n ENSGT00940000165492.a.a ENSGT00940000154394.b.a.a.b.b ENSGT00940000164907.b.b.d.a #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286.d ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d.e ##25 ENSGT00390000011500.k ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000155373 #14 ENSGT00940000160615.a.b ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000156261.db.a #12 ENSGT00940000158540.y.a #11 ENSGT00940000159990 #10 ENSGT00940000157419.x #9 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157936.l Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00390000016384.l.a ENSGT00940000167171 ENSGT00940000160451 #27 ENSGT00390000016526 #15 ENSGT00390000020276.lb #16 ENSGT00940000154394.b.a.a.a.a.a.b ENSGT00620000089226 ENSGT00940000164907.b.a.c ##18 ENSGT00940000155151.a.a.a.d #19 ENSGT00940000154394.b.a.b.q ENSGT00940000154394.b.a.a.b.b ENSGT00940000164907.b.b.d.a #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286.d ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d.e ##25 ENSGT00390000011500.k ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000155373 #14 ENSGT00940000160615.a.b ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000156261.db.a #12 ENSGT00940000158540.y.a #11 ENSGT00940000159990 #10 ENSGT00940000157419.x #9 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157936.l Salmo ANCESTRAL SPECIES ENSGT00940000158674.h ENSGT00530000063187.A.h ENSGT00390000000224.j ENSGT00550000074961.b.d ENSGT00390000009566.g ENSGT00940000158501.d.a.c ENSGT00390000016384.l.a ENSGT00940000160451 #27 ENSGT00390000016526 #15 ENSGT00390000020276.lb #16 ENSGT00940000154394.b.a.a.b.b ENSGT00940000164907.b.b.d.a #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286.d ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d.e ##25 ENSGT00390000011500.k ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000167707 ENSGT00940000155373 #14 ENSGT00940000160615.a.b ENSGT00940000156261.db.a #12 ENSGT00940000158540.y.a #11 ENSGT00940000159990 #10 ENSGT00940000157419.x #9 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157936.l Atlantic salmon MODERN SPECIES ENSSSAG00000065449 ENSSSAG00000065463 ppp6c (ENSSSAG00000119839) SCAI (ENSSSAG00000117569) arpc5l (ENSSSAG00000066267) RPL35 (ENSSSAG00000066273) ENSSSAG00000094965 ncs1a (ENSSSAG00000066286) ENSSSAG00000066294 #27 ENSSSAG00000066321 #15 ENSSSAG00000066731 #16 zgc:55461 (ENSSSAG00000101622) lmo4a (ENSSSAG00000066759) #18 ccn1l1 (ENSSSAG00000116908) ##19 pole3 (ENSSSAG00000066768) #20 lrsam1 (ENSSSAG00000066808) #22 rpl12 (ENSSSAG00000066776) #21 ENSSSAG00000066833 ndor1 (ENSSSAG00000066849) #23 ntmt1 (ENSSSAG00000066881) #24 IER5 (ENSSSAG00000066882) ##25 ptpa (ENSSSAG00000066908) crata (ENSSSAG00000067447) #26 ENSSSAG00000070732 cdk9 (ENSSSAG00000070738) #14 DENND1A (ENSSSAG00000070774) #12 crb2a (ENSSSAG00000070752) LHX2 (ENSSSAG00000069676) #11 NEK6 (ENSSSAG00000111428) #10 ENSSSAG00000117314 psmb7 (ENSSSAG00000070917) #9 River trout MODERN SPECIES 15 rpl35 (ENSSTUG00000010753) ENSSTUG00000010763 ENSSTUG00000010777 gpr107 (ENSSTUG00000010800) #27 fpgs (ENSSTUG00000010958) #15 ENSSTUG00000012902 ENSSTUG00000012952 ENSSTUG00000012981 ENSSTUG00000012998 lmo4a (ENSSTUG00000013015) #18 ENSSTUG00000013026 ccn1l1 (ENSSTUG00000013028) ##19 pole3 (ENSSTUG00000013038) #20 rpl12 (ENSSTUG00000013074) #21 ENSSTUG00000013137 lrsam1 (ENSSTUG00000013165) #22 ENSSTUG00000013659 ndor1 (ENSSTUG00000013700) #23 ntmt1 (ENSSTUG00000013744) #24 ier5l (ENSSTUG00000013752) ##25 ptpa (ENSSTUG00000013797) crata (ENSSTUG00000014589) #26 ENSSTUG00000016927 cdk9 (ENSSTUG00000016931) #14 ENSSTUG00000016961 DENND1A (ENSSTUG00000017039) #12 LHX2 (ENSSTUG00000017212) #11 NEK6 (ENSSTUG00000017275) #10 psmb7 (ENSSTUG00000017461) #9 nr5a1b (ENSSTUG00000017519) #8 NR6A1 (ENSSTUG00000017537) Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00940000158674.h ENSGT00530000063187.A.h ENSGT00390000000224.j ENSGT00550000074961.b.d ENSGT00390000009566.g ENSGT00940000158501.d.a.c ENSGT00390000016384.l.a ENSGT00940000167171 ENSGT00940000160451 #27 ENSGT00390000016526 #15 ENSGT00940000165492.a.a ENSGT00940000164907.b.b.d.a #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286.d ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d.e ##25 ENSGT00390000011500.k ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000155373 #14 ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000156261.db.a #12 ENSGT00940000158540.y.a #11 ENSGT00940000159990.d #10 ENSGT00940000157419.x #9 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157936.l ENSGT01100000263520.a.a.a.a.b.a.c.b.a.a Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00940000158674.h ENSGT00530000063187.A.h ENSGT00390000000224.j ENSGT00550000074961.b.d ENSGT00390000009566.g ENSGT00940000158501.d.a.c ENSGT00390000016384.l.a ENSGT00940000167171 ENSGT00940000160451 #27 ENSGT00390000016526 #15 ENSGT00940000165492.a.a ENSGT00940000164907.b.b.d.a #18 ENSGT00940000155151.a.a.b ##19 ENSGT00940000164386 #20 ENSGT00390000006922 #21 ENSGT00930000151044 #22 ENSGT00530000064286.d ENSGT00930000151050 #23 ENSGT00390000008371.b #24 ENSGT00900000141021.b.a.d.e ##25 ENSGT00390000011500.k ENSGT01060000248556.A.a.a.a.b.a #26 ENSGT00940000155373 #14 ENSGT00950000183101.a.b.b.a.b ##13 ENSGT00940000156261.db.a #12 ENSGT00940000158540.y.a #11 ENSGT00940000159990.d #10 ENSGT00940000157419.x #9 ENSGT00940000153391.c.b.a.j.b #8 ENSGT00940000157936.l ENSGT01100000263520.a.a.a.a.b.a.c.b.a.a Chinook salmon MODERN SPECIES 12 SCAI (ENSOTSG00005047741) arpc5lb (ENSOTSG00005047733) rpl35 (ENSOTSG00005047731) ENSOTSG00005047730 ENSOTSG00005047726 gpr107 (ENSOTSG00005047719) #27 fpgs (ENSOTSG00005047697) #15 ENSOTSG00005047687 TUBB4B (ENSOTSG00005047686) ENSOTSG00005047684 lmo4a (ENSOTSG00005047683) #18 ccn1l1 (ENSOTSG00005047682) ##19 ENSOTSG00005047681 pole3 (ENSOTSG00005047680) #20 rpl12 (ENSOTSG00005047672) #21 lrsam1 (ENSOTSG00005047670) #22 ENSOTSG00005047669 ndor1 (ENSOTSG00005047666) #23 ntmt1 (ENSOTSG00005047665) #24 ier5l (ENSOTSG00005047663) ##25 ptpa (ENSOTSG00005047657) crata (ENSOTSG00005047465) #26 CRB2 (ENSOTSG00005047456) ##13 DENND1A (ENSOTSG00005047332) #12 LHX2 (ENSOTSG00005047331) #11 NEK6 (ENSOTSG00005047329) #10 psmb7 (ENSOTSG00005047328) #9 nr5a1b (ENSOTSG00005047326) #8 NR6A1 (ENSOTSG00005047324) ENSOTSG00005047323 ccng2 (ENSOTSG00005047322) Coho salmon MODERN SPECIES 15 ENSOKIG00005034668 ppp6c (ENSOKIG00005034752) SCAI (ENSOKIG00005034777) arpc5lb (ENSOKIG00005034885) RPL35 (ENSOKIG00005034926) ENSOKIG00005034941 ENSOKIG00005034963 gpr107 (ENSOKIG00005035007) #27 fpgs (ENSOKIG00005035313) #15 ENSOKIG00005036469 ENSOKIG00005036524 lmo4a (ENSOKIG00005036570) #18 ccn1l1 (ENSOKIG00005036602) ##19 pole3 (ENSOKIG00005036619) #20 rpl12 (ENSOKIG00005036665) #21 lrsam1 (ENSOKIG00005036797) #22 ENSOKIG00005036987 ndor1 (ENSOKIG00005037020) #23 ntmt1 (ENSOKIG00005037263) #24 ier5l (ENSOKIG00005037286) ##25 ptpa (ENSOKIG00005037321) crata (ENSOKIG00005036280) #26 cdk9 (ENSOKIG00005038769) #14 crb2a (ENSOKIG00005038790) ENSOKIG00005038911 DENND1A (ENSOKIG00005038947) #12 LHX2 (ENSOKIG00005039581) #11 NEK6 (ENSOKIG00005039628) #10 psmb7 (ENSOKIG00005039801) #9 nr5a1b (ENSOKIG00005039853) #8 NR6A1 (ENSOKIG00005039873) Rainbow trout MODERN SPECIES 26 SCAI (ENSOMYG00000043028) arpc5l (ENSOMYG00000043006) RPL35 (ENSOMYG00000042997) ENSOMYG00000068299 ENSOMYG00000042991 ENSOMYG00000077280 ENSOMYG00000042982 ENSOMYG00000042954 #27 ENSOMYG00000042662 #15 ENSOMYG00000042589 ENSOMYG00000042585 lmo4a (ENSOMYG00000042581) #18 ccn1l1 (ENSOMYG00000042576) ##19 pole3 (ENSOMYG00000042572) #20 rpl12 (ENSOMYG00000042549) #21 lrsam1 (ENSOMYG00000042530) #22 ENSOMYG00000042517 ndor1 (ENSOMYG00000042500) #23 ntmt1 (ENSOMYG00000042491) #24 ENSOMYG00000060356 ier5l (ENSOMYG00000042486) ##25 ENSOMYG00000060240 ptpa (ENSOMYG00000042435) crata (ENSOMYG00000042148) #26 ENSOMYG00000042044 #14 crb2a (ENSOMYG00000042025) ENSOMYG00000072052 DENND1A (ENSOMYG00000041827) #12 LHX2 (ENSOMYG00000041798) #11 ENSOMYG00000075449 NEK6 (ENSOMYG00000041782) #10 Huchen MODERN SPECIES 1573 ENSHHUG00000050321 ENSHHUG00000050325 gpr107 (ENSHHUG00000050371) #27 fpgs (ENSHHUG00000050379) #15 ENSHHUG00000050390 zgc:55461 (ENSHHUG00000050408) lmo4a (ENSHHUG00000050413) #18 ccn1l1 (ENSHHUG00000050415) ##19 ENSHHUG00000050420 pole3 (ENSHHUG00000050421) #20 rpl12 (ENSHHUG00000050429) #21 lrsam1 (ENSHHUG00000050460) #22 ENSHHUG00000050466 ENSHHUG00000050471 ndor1 (ENSHHUG00000050475) #23 ntmt1 (ENSHHUG00000050489) #24 ENSHHUG00000050502 Northern pike MODERN SPECIES 13 ENSELUG00000020415 ENSELUG00000020408 ENSELUG00000033861 ncs1a (ENSELUG00000032344) #28 gpr107 (ENSELUG00000020299) #27 fpgs (ENSELUG00000020278) #15 ENSELUG00000027081 #16 ENSELUG00000020184 #16 ENSELUG00000024741 #16 ENSELUG00000030475 TUBB4B (ENSELUG00000020007) lmo4a (ENSELUG00000019991) #18 ccn1l1 (ENSELUG00000019976) ##19 pole3 (ENSELUG00000001285) #20 rpl12 (ENSELUG00000019938) #21 lrsam1 (ENSELUG00000019893) #22 ntmt1 (ENSELUG00000019833) #24 ENSELUG00000034166 ier5l (ENSELUG00000019814) ##25 ptpa (ENSELUG00000000869) crata (ENSELUG00000019745) #26 cdk9 (ENSELUG00000019692) #14 CRB2 (ENSELUG00000019522) ##13 DENND1A (ENSELUG00000000844) #12 LHX2 (ENSELUG00000019408) #11 NEK6 (ENSELUG00000019344) #10 psmb7 (ENSELUG00000019284) #9 nr5a1b (ENSELUG00000019192) #8 NR6A1 (ENSELUG00000019147) ENSELUG00000029906 ENSELUG00000019008 Spotted gar MODERN SPECIES 660 ambp (ENSLOCG00000002312) nrarpa (ENSLOCG00000017338) EXD3 (ENSLOCG00000002330) wdr31 (ENSLOCG00000002358) ENSLOCG00000002366 tor4aa (ENSLOCG00000017339) ENSLOCG00000002383 ENSLOCG00000002409 #16 ENSLOCG00000002421 ENSLOCG00000002441 ENSLOCG00000002458 ENSLOCG00000002479 lmo4a (ENSLOCG00000002487) #18 ccn1l1 (ENSLOCG00000002502) ##19 pole3 (ENSLOCG00000002521) #20 lrsam1 (ENSLOCG00000002536) #22 ENSLOCG00000002555 ENSLOCG00000002569 ENSLOCG00000002585 ENSLOCG00000002597 slc27a4 (ENSLOCG00000002609) ENSLOCG00000002619 mymk (ENSLOCG00000002633) ADAMTSL2 (ENSLOCG00000002647) FAM163B (ENSLOCG00000002663) dbh (ENSLOCG00000002677) sardh (ENSLOCG00000002697) cfap157 (ENSLOCG00000002725) CERCAM (ENSLOCG00000002746) urm1 (ENSLOCG00000002768) tor2a (ENSLOCG00000002778) Reedfish MODERN SPECIES 17 ENSECRG00000017675 ENSECRG00000017710 ENSECRG00000017724 ENSECRG00000017756 ENSECRG00000017828 ENSECRG00000017881 #16 TUBB4B (ENSECRG00000017930) ENSECRG00000018141 ENSECRG00000018175 ENSECRG00000018190 ENSECRG00000018206 SLC34A3 (ENSECRG00000018228) lmo4a (ENSECRG00000018271) #18 pole3 (ENSECRG00000018295) #20 rpl12 (ENSECRG00000018310) #21 lrsam1 (ENSECRG00000018356) #22 FKBP15 (ENSECRG00000018419) ndor1 (ENSECRG00000018516) #23 TRAF2 (ENSECRG00000018570) ENSECRG00000018619 ENSECRG00000018701 zgc:113162 (ENSECRG00000018727) dpp7 (ENSECRG00000018756) ENSECRG00000018849 man1b1b (ENSECRG00000019895) cacna1ba (ENSECRG00000020089) ehmt1b (ENSECRG00000021659) ARRDC1 (ENSECRG00000021699) glulc (ENSECRG00000021714) mrps2 (ENSECRG00000021729) ndc80 (ENSECRG00000021744)