Gnathostomata ANCESTRAL SPECIES 1395 ENSGT00390000009155 #22 ENSGT00940000155884 #23 Euteleostomi ANCESTRAL SPECIES 10 ENSGT00940000157134 ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406 #8 ENSGT00940000155080 #9 ENSGT00940000165329 ENSGT00940000160615.b.b.a ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000165345 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00950000183029.B ENSGT00940000160370 Sarcopterygii ANCESTRAL SPECIES 773 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000156954 Tetrapoda ANCESTRAL SPECIES 4 ENSGT00390000009790 ENSGT00940000157134 ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000165329 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00400000024746 ENSGT00950000183029.B ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C Amniota ANCESTRAL SPECIES 1 ENSGT00940000157134 ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000165329 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000171801 ENSGT00950000183029.B.c.a ENSGT00400000024746 Mammalia ANCESTRAL SPECIES 2 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000171801 ENSGT00950000183029.B.c.a ENSGT00400000024746 ENSGT00950000183029.B.c.b ENSGT00940000160370 Theria ANCESTRAL SPECIES 4 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000171801 ENSGT00950000183029.B.c.a ENSGT00400000024746 ENSGT00950000183029.B.c.b Eutheria ANCESTRAL SPECIES 9 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163729 #10 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a Primates ANCESTRAL SPECIES 5 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163729 #10 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 Haplorrhini ANCESTRAL SPECIES 2 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 Simiiformes ANCESTRAL SPECIES 5 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00390000011354.d ENSGT00390000017590 ENSGT00940000155064.d ENSGT00390000009790.u ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.p ##34 ENSGT00940000154353.A.o #32 ENSGT00940000154353.B.k.a #34 ENSGT00940000162601.m ##35 ENSGT00940000162097.y.a ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a.r ENSGT00940000160370 Cebidae ANCESTRAL SPECIES 5 ENSGT00390000011354.c ENSGT00390000017590 ENSGT00940000155064.d ENSGT00390000009790.u ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.p ##34 ENSGT00940000154353.A.o #32 ENSGT00940000154353.B.k.a #34 ENSGT00940000162601.m ##35 ENSGT00940000162097.y.a ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a.r ENSGT00940000160370 Marmoset MODERN SPECIES 16 LGSN (ENSCJAG00000001759) #7 PTP4A1 (ENSCJAG00000001743) #8 PHF3 (ENSCJAG00000001708) #9 EYS (ENSCJAG00000031425) #10 ENSCJAG00000083894 #11 ENSCJAG00000085446 #12 ADGRB3 (ENSCJAG00000004137) #13 ENSCJAG00000081259 #14 ENSCJAG00000080901 #15 ENSCJAG00000080063 #16 ENSCJAG00000083091 #17 LMBRD1 (ENSCJAG00000004013) #18 COL19A1 (ENSCJAG00000003875) #19 COL9A1 (ENSCJAG00000003767) #20 FAM135A (ENSCJAG00000003701) #21 SDHAF4 (ENSCJAG00000003698) #22 SMAP1 (ENSCJAG00000003659) #23 B3GAT2 (ENSCJAG00000064513) #24 ENSCJAG00000077933 #25 ENSCJAG00000059733 #26 ENSCJAG00000066859 #27 OGFRL1 (ENSCJAG00000003635) #28 RIMS1 (ENSCJAG00000009737) #29 ENSCJAG00000086119 #30 KCNQ5 (ENSCJAG00000009916) #31 ENSCJAG00000055378 #32 ENSCJAG00000062698 #33 ENSCJAG00000009945 #34 KHDC3L (ENSCJAG00000009947) #35 DDX43 (ENSCJAG00000009966) #36 CGAS (ENSCJAG00000009988) #37 Cebidae_a ANCESTRAL SPECIES 98 ENSGT00940000154770.q.a.b.a ENSGT00390000017590 ENSGT00940000155064.d ENSGT00390000009790.u ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.p ##34 ENSGT00940000154353.A.o #32 ENSGT00940000154353.B.k.a #34 ENSGT00940000162601.m ##35 ENSGT00940000162097.y.a ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a.r ENSGT00940000160370 Capuchin MODERN SPECIES 218 ENSCCAG00000037200 ENSCCAG00000025190 ENSCCAG00000022216 OR4C3 (ENSCCAG00000029781) OR4X1 (ENSCCAG00000032042) OR4X2 (ENSCCAG00000010467) PTPRJ (ENSCCAG00000029471) ENSCCAG00000027401 NUP160 (ENSCCAG00000027053) ENSCCAG00000037992 FNBP4 (ENSCCAG00000035854) LMBRD1 (ENSCCAG00000036453) #18 COL19A1 (ENSCCAG00000027210) #19 COL9A1 (ENSCCAG00000022900) #20 FAM135A (ENSCCAG00000026678) #21 SDHAF4 (ENSCCAG00000035084) #22 SMAP1 (ENSCCAG00000025653) #23 B3GAT2 (ENSCCAG00000034805) #24 OGFRL1 (ENSCCAG00000024314) #28 ENSCCAG00000031383 #29 Bolivian squirrel monkey MODERN SPECIES 59 KHDRBS2 (ENSSBOG00000019779) ENSSBOG00000021435 LGSN (ENSSBOG00000031920) #7 ENSSBOG00000020230 #8 ENSSBOG00000028663 PHF3 (ENSSBOG00000032463) #9 ENSSBOG00000031359 #10 ENSSBOG00000028568 ENSSBOG00000004169 ADGRB3 (ENSSBOG00000024707) #13 ENSSBOG00000019508 LMBRD1 (ENSSBOG00000030173) #18 COL19A1 (ENSSBOG00000022687) #19 COL9A1 (ENSSBOG00000029347) #20 FAM135A (ENSSBOG00000035417) #21 SDHAF4 (ENSSBOG00000033365) #22 SMAP1 (ENSSBOG00000035623) #23 B3GAT2 (ENSSBOG00000035945) #24 ENSSBOG00000019180 OGFRL1 (ENSSBOG00000035704) #28 RIMS1 (ENSSBOG00000031761) #29 KCNQ5 (ENSSBOG00000021037) #31 ENSSBOG00000032311 #32 DPPA5 (ENSSBOG00000028113) #34 KHDC3L (ENSSBOG00000026496) ##35 OOEP (ENSSBOG00000020645) DDX43 (ENSSBOG00000024961) #36 CGAS (ENSSBOG00000035793) #37 MTO1 (ENSSBOG00000009456) ENSSBOG00000033014 SLC17A5 (ENSSBOG00000036204) Catarrhini ANCESTRAL SPECIES 5 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00970000198019 Hominoidea ANCESTRAL SPECIES 4 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00970000198019 Hominidae ANCESTRAL SPECIES 5 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00940000153311.a.b.a.fb.a.a ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00940000153311.a.b.a.fb.a.a ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000153052.c.b.b.a.a ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00870000136506.ob.b ENSGT00940000167584 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00390000018130.a.a.a.h ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00390000002661.b.kb.a ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 Gorilla MODERN SPECIES 19 LGSN (ENSGGOG00000003942) #7 PTP4A1 (ENSGGOG00000043919) #8 ENSGGOG00000024946 PHF3 (ENSGGOG00000007906) #9 EYS (ENSGGOG00000034946) #10 ENSGGOG00000027663 ENSGGOG00000042367 ENSGGOG00000026362 ENSGGOG00000038010 ADGRB3 (ENSGGOG00000015587) #13 LMBRD1 (ENSGGOG00000014341) #18 ENSGGOG00000021992 ENSGGOG00000005906 #19 COL9A1 (ENSGGOG00000010221) #20 FAM135A (ENSGGOG00000004791) #21 SDHAF4 (ENSGGOG00000037113) #22 ENSGGOG00000040766 SMAP1 (ENSGGOG00000011243) #23 B3GAT2 (ENSGGOG00000021933) #24 OGFRL1 (ENSGGOG00000010724) #28 RIMS1 (ENSGGOG00000003628) #29 ENSGGOG00000040624 KCNQ5 (ENSGGOG00000011406) #31 ENSGGOG00000038380 ENSGGOG00000038734 ENSGGOG00000043309 #32 KHDC1L (ENSGGOG00000025471) #32 ENSGGOG00000006894 #32 ENSGGOG00000038983 ENSGGOG00000041551 DPPA5 (ENSGGOG00000012001) #34 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00940000153311.a.b.a.fb.a.a ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000153052.c.b.b.a.a ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00870000136506.ob.b ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00390000018130.a.a.a.h ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00390000002661.b.kb.a ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 Pan ANCESTRAL SPECIES 5 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155196.q.a.b ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000153052.c.b.b.a.a ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00870000136506.ob.b ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00940000154185.l.a.b.b ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00390000018130.a.a.a.h ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00390000002661.b.kb.a ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 Chimpanzee MODERN SPECIES 19 ENSPTRG00000050769 KHDRBS2 (ENSPTRG00000018311) LGSN (ENSPTRG00000018312) #7 PTP4A1 (ENSPTRG00000043932) #8 ENSPTRG00000046993 PHF3 (ENSPTRG00000018315) #9 EYS (ENSPTRG00000051263) #10 ENSPTRG00000018324 ENSPTRG00000051292 ADGRB3 (ENSPTRG00000018325) #13 LMBRD1 (ENSPTRG00000018326) #18 ENSPTRG00000044889 COL19A1 (ENSPTRG00000018327) #19 COL9A1 (ENSPTRG00000018329) #20 FAM135A (ENSPTRG00000018330) #21 SDHAF4 (ENSPTRG00000018331) #22 ENSPTRG00000050587 SMAP1 (ENSPTRG00000018333) #23 B3GAT2 (ENSPTRG00000018334) #24 ENSPTRG00000039066 OGFRL1 (ENSPTRG00000018335) #28 RIMS1 (ENSPTRG00000051415) #29 ENSPTRG00000046439 KCNQ5 (ENSPTRG00000018339) #31 ENSPTRG00000048515 ENSPTRG00000018341 #32 KHDC1L (ENSPTRG00000052071) #32 ENSPTRG00000051619 #32 ENSPTRG00000049430 DPPA5 (ENSPTRG00000029547) #34 KHDC3L (ENSPTRG00000029546) #35 Bonobo MODERN SPECIES 19 ZNF451 (ENSPPAG00000042859) BAG2 (ENSPPAG00000039605) RAB23 (ENSPPAG00000010023) ENSPPAG00000000267 KHDRBS2 (ENSPPAG00000032651) ENSPPAG00000042416 LGSN (ENSPPAG00000032360) #7 PTP4A1 (ENSPPAG00000043163) #8 PHF3 (ENSPPAG00000027689) #9 ADGRB3 (ENSPPAG00000037212) #13 LMBRD1 (ENSPPAG00000032391) #18 ENSPPAG00000028836 COL19A1 (ENSPPAG00000040447) #19 COL9A1 (ENSPPAG00000036128) #20 FAM135A (ENSPPAG00000034229) #21 SDHAF4 (ENSPPAG00000032082) #22 ENSPPAG00000032234 SMAP1 (ENSPPAG00000036070) #23 ENSPPAG00000032375 ENSPPAG00000041570 OGFRL1 (ENSPPAG00000043342) #28 RIMS1 (ENSPPAG00000040646) #29 ENSPPAG00000034250 KCNQ5 (ENSPPAG00000040956) #31 ENSPPAG00000038149 ENSPPAG00000041906 #32 KHDC1L (ENSPPAG00000025424) #32 ENSPPAG00000043529 #32 ENSPPAG00000039320 DPPA5 (ENSPPAG00000035257) #34 KHDC3L (ENSPPAG00000043830) #35 Human MODERN SPECIES 18 PRIM2 (ENSG00000146143) KHDRBS2 (ENSG00000112232) FKBP1C (ENSG00000198225) LGSN (ENSG00000146166) #7 PTP4A1 (ENSG00000112245) #8 ENSG00000285976 PHF3 (ENSG00000118482) #9 EYS (ENSG00000188107) #10 ZC3H11C (ENSG00000214558) ADGRB3 (ENSG00000135298) #13 ENSG00000288712 LMBRD1 (ENSG00000168216) #18 COL19A1 (ENSG00000082293) #19 COL9A1 (ENSG00000112280) #20 FAM135A (ENSG00000082269) #21 SDHAF4 (ENSG00000154079) #22 SMAP1 (ENSG00000112305) #23 B3GAT2 (ENSG00000112309) #24 OGFRL1 (ENSG00000119900) #28 RIMS1 (ENSG00000079841) #29 KCNQ5 (ENSG00000185760) #31 KHDC1L (ENSG00000256980) #32 KHDC1 (ENSG00000135314) #32 DPPA5 (ENSG00000203909) #34 KHDC3L (ENSG00000203908) #35 OOEP (ENSG00000203907) DDX43 (ENSG00000080007) #36 CGAS (ENSG00000164430) #37 MTO1 (ENSG00000135297) EEF1A1 (ENSG00000156508) SLC17A5 (ENSG00000119899) Orangutan MODERN SPECIES 19 BAG2 (ENSPPYG00000030596) RAB23 (ENSPPYG00000016739) PRIM2 (ENSPPYG00000016740) ENSPPYG00000031590 KHDRBS2 (ENSPPYG00000029598) FKBP1C (ENSPPYG00000016741) LGSN (ENSPPYG00000016742) #7 PTP4A1 (ENSPPYG00000016743) #8 PHF3 (ENSPPYG00000016744) #9 EYS (ENSPPYG00000016753) #10 ADGRB3 (ENSPPYG00000016755) #13 LMBRD1 (ENSPPYG00000016757) #18 COL19A1 (ENSPPYG00000016758) #19 COL9A1 (ENSPPYG00000016759) #20 FAM135A (ENSPPYG00000016760) #21 SDHAF4 (ENSPPYG00000039186) #22 SMAP1 (ENSPPYG00000016763) #23 B3GAT2 (ENSPPYG00000016764) #24 OGFRL1 (ENSPPYG00000016765) #28 RIMS1 (ENSPPYG00000016768) #29 KCNQ5 (ENSPPYG00000016769) #31 KHDC1L (ENSPPYG00000016770) #32 KHDC1 (ENSPPYG00000033174) #32 DPPA5 (ENSPPYG00000016771) #34 KHDC3L (ENSPPYG00000016772) #35 OOEP (ENSPPYG00000016773) DDX43 (ENSPPYG00000016774) #36 CGAS (ENSPPYG00000016775) #37 MTO1 (ENSPPYG00000016776) EEF1A1 (ENSPPYG00000016777) SLC17A5 (ENSPPYG00000016778) Gibbon MODERN SPECIES 18 LGSN (ENSNLEG00000027917) #7 ENSNLEG00000028056 PTP4A1 (ENSNLEG00000029820) #8 PHF3 (ENSNLEG00000026859) #9 EYS (ENSNLEG00000028360) #10 ENSNLEG00000031911 ENSNLEG00000035428 ENSNLEG00000034833 ENSNLEG00000034181 ADGRB3 (ENSNLEG00000000505) #13 LMBRD1 (ENSNLEG00000000524) #18 ENSNLEG00000034891 COL19A1 (ENSNLEG00000000613) #19 COL9A1 (ENSNLEG00000000726) #20 FAM135A (ENSNLEG00000000844) #21 SDHAF4 (ENSNLEG00000036240) #22 SMAP1 (ENSNLEG00000000922) #23 B3GAT2 (ENSNLEG00000000971) #24 OGFRL1 (ENSNLEG00000029017) #28 ENSNLEG00000031051 RIMS1 (ENSNLEG00000001000) #29 ENSNLEG00000033063 ENSNLEG00000028596 ENSNLEG00000031152 KCNQ5 (ENSNLEG00000001127) #31 ENSNLEG00000001177 #32 KHDC1L (ENSNLEG00000001179) #32 ENSNLEG00000029407 ENSNLEG00000001183 #32 DPPA5 (ENSNLEG00000001195) #34 KHDC3L (ENSNLEG00000001200) #35 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000162903.f ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00500000044955.j.a.b ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000162903.f ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00500000044955.j.a.b ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 Vervet Monkey MODERN SPECIES 8 ZNF451 (ENSCSAG00000013418) BAG2 (ENSCSAG00000013425) RAB23 (ENSCSAG00000013438) PRIM2 (ENSCSAG00000013452) KHDRBS2 (ENSCSAG00000013462) LGSN (ENSCSAG00000013469) #7 ENSCSAG00000013484 PTP4A1 (ENSCSAG00000013493) #8 PHF3 (ENSCSAG00000013501) #9 ADGRB3 (ENSCSAG00000013526) #13 ENSCSAG00000013541 LMBRD1 (ENSCSAG00000013548) #18 ENSCSAG00000013634 #19 COL9A1 (ENSCSAG00000013786) #20 FAM135A (ENSCSAG00000013861) #21 SDHAF4 (ENSCSAG00000013870) #22 SMAP1 (ENSCSAG00000013875) #23 B3GAT2 (ENSCSAG00000013881) #24 OGFRL1 (ENSCSAG00000013882) #28 RIMS1 (ENSCSAG00000013893) #29 KCNQ5 (ENSCSAG00000013904) #31 ENSCSAG00000013909 #32 KHDC1 (ENSCSAG00000013912) #32 DPPA5 (ENSCSAG00000013914) #34 KHDC3L (ENSCSAG00000013920) #35 OOEP (ENSCSAG00000013926) DDX43 (ENSCSAG00000013999) #36 CGAS (ENSCSAG00000014020) #37 MTO1 (ENSCSAG00000014033) ENSCSAG00000014041 ENSCSAG00000019292 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT01030000234543.A.b.eb ENSGT00920000149123.n ENSGT00390000013639 #7 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a.a ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00500000044955.j.a.b ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 Macaca ANCESTRAL SPECIES 9 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT01030000234543.A.b.eb ENSGT00920000149123.n ENSGT00390000013639 #7 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 Pig-tailed macaque MODERN SPECIES 558 ENSMNEG00000029524 KHDRBS2 (ENSMNEG00000042875) ENSMNEG00000028616 LGSN (ENSMNEG00000041750) #7 ENSMNEG00000030116 PTP4A1 (ENSMNEG00000031726) #8 PHF3 (ENSMNEG00000039213) #9 EYS (ENSMNEG00000030719) #10 ENSMNEG00000006166 ENSMNEG00000015246 ADGRB3 (ENSMNEG00000033979) #13 LMBRD1 (ENSMNEG00000044526) #18 COL19A1 (ENSMNEG00000043640) #19 COL9A1 (ENSMNEG00000030689) #20 FAM135A (ENSMNEG00000034243) #21 SDHAF4 (ENSMNEG00000030604) #22 SMAP1 (ENSMNEG00000033567) #23 B3GAT2 (ENSMNEG00000045320) #24 OGFRL1 (ENSMNEG00000029789) #28 ENSMNEG00000035315 RIMS1 (ENSMNEG00000031889) #29 ENSMNEG00000042932 ENSMNEG00000031799 KCNQ5 (ENSMNEG00000040005) #31 ENSMNEG00000042746 #32 ENSMNEG00000035766 KHDC1 (ENSMNEG00000035131) #32 DPPA5 (ENSMNEG00000034230) #34 KHDC3L (ENSMNEG00000038910) #35 OOEP (ENSMNEG00000032704) DDX43 (ENSMNEG00000038522) #36 Macaca_a ANCESTRAL SPECIES 9 ENSGT00940000162318 ENSGT00940000155008.C ENSGT00390000016954 ENSGT00390000011354 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b.v Crab-eating macaque MODERN SPECIES 14 EFHC1 (ENSMFAG00000036082) TRAM2 (ENSMFAG00000042433) ENSMFAG00000059971 PTP4A1 (ENSMFAG00000046284) #8 PHF3 (ENSMFAG00000046395) #9 ENSMFAG00000064522 ENSMFAG00000064767 EYS (ENSMFAG00000032080) #10 ENSMFAG00000052667 ADGRB3 (ENSMFAG00000003819) #13 ENSMFAG00000050203 LMBRD1 (ENSMFAG00000028262) #18 COL19A1 (ENSMFAG00000031633) #19 COL9A1 (ENSMFAG00000031890) #20 FAM135A (ENSMFAG00000002013) #21 SDHAF4 (ENSMFAG00000044658) #22 SMAP1 (ENSMFAG00000032465) #23 B3GAT2 (ENSMFAG00000064443) #24 OGFRL1 (ENSMFAG00000031290) #28 ENSMFAG00000047850 ##12 RIMS1 (ENSMFAG00000038905) #29 ENSMFAG00000059993 ENSMFAG00000061169 KCNQ5 (ENSMFAG00000036978) #31 ENSMFAG00000047354 #32 ENSMFAG00000062492 ENSMFAG00000037484 #32 DPPA5 (ENSMFAG00000045714) #34 KHDC3L (ENSMFAG00000041622) #35 OOEP (ENSMFAG00000044288) DDX43 (ENSMFAG00000043087) #36 Cercopithecinae_b ANCESTRAL SPECIES 18 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000153311.a.b.a.fb.a.a ENSGT00940000157134 ENSGT00920000149123.n ENSGT00390000013639 #7 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000156554.d ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a.a ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00500000044955.j.a.b ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601.k #35 ENSGT00940000162097 ENSGT00940000164259 #36 Olive baboon MODERN SPECIES 16 PHF3 (ENSPANG00000024773) #9 EYS (ENSPANG00000007116) #10 ENSPANG00000047846 ##17 ENSPANG00000007115 ENSPANG00000045654 ENSPANG00000046793 ENSPANG00000035700 ADGRB3 (ENSPANG00000032616) #13 ENSPANG00000041988 ENSPANG00000048677 LMBRD1 (ENSPANG00000023065) #18 COL19A1 (ENSPANG00000015947) #19 COL9A1 (ENSPANG00000021650) #20 ENSPANG00000029634 FAM135A (ENSPANG00000000816) #21 SDHAF4 (ENSPANG00000024246) #22 ENSPANG00000047991 ENSPANG00000040282 SMAP1 (ENSPANG00000009986) #23 B3GAT2 (ENSPANG00000021732) #24 ENSPANG00000047564 ##12 OGFRL1 (ENSPANG00000019582) #28 ENSPANG00000047414 ENSPANG00000010457 RIMS1 (ENSPANG00000024245) #29 KCNQ5 (ENSPANG00000019581) #31 ENSPANG00000015806 #32 KHDC1L (ENSPANG00000024450) #32 ENSPANG00000039650 ENSPANG00000048234 ENSPANG00000020317 #35 Cercopithecinae_d ANCESTRAL SPECIES 157 ENSGT00940000156554.d ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a.a ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00500000044955.j.a.b ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00940000154353.B #34 ENSGT00940000162601.k #35 ENSGT00940000162097 ENSGT00940000164259 #36 Sooty mangabey MODERN SPECIES 143 ENSCATG00000040628 ENSCATG00000041919 ENSCATG00000043415 #13 ENSCATG00000033482 LMBRD1 (ENSCATG00000036208) #18 COL19A1 (ENSCATG00000042450) #19 COL9A1 (ENSCATG00000028556) #20 FAM135A (ENSCATG00000032192) #21 SDHAF4 (ENSCATG00000032791) #22 SMAP1 (ENSCATG00000002544) #23 B3GAT2 (ENSCATG00000041104) #24 OGFRL1 (ENSCATG00000044369) #28 ENSCATG00000044513 RIMS1 (ENSCATG00000015586) #29 ENSCATG00000023513 KCNQ5 (ENSCATG00000024600) #31 ENSCATG00000003513 ENSCATG00000009252 ENSCATG00000008489 #32 KHDC1L (ENSCATG00000030639) #32 KHDC1 (ENSCATG00000033213) #32 ENSCATG00000029105 DPPA5 (ENSCATG00000032143) #34 KHDC3L (ENSCATG00000033310) #35 Rhinopithecus ANCESTRAL SPECIES 158 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155258.s.a ENSGT00940000155134 #29 ENSGT00500000044955.j.a.b ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.m #32 ENSGT00940000154353.A.n.b #32 ENSGT00940000154353.A.n.a #32 ENSGT00530000063880.b ENSGT00390000011922 ENSGT00390000002661.b ENSGT00940000154353.B.o #34 ENSGT00940000162601 #35 Golden snub-nosed monkey MODERN SPECIES 663 ADGRB3 (ENSRROG00000039346) #13 ENSRROG00000037012 ENSRROG00000026608 LMBRD1 (ENSRROG00000037176) #18 COL19A1 (ENSRROG00000040504) #19 COL9A1 (ENSRROG00000039731) #20 FAM135A (ENSRROG00000042516) #21 SDHAF4 (ENSRROG00000040092) #22 SMAP1 (ENSRROG00000044879) #23 B3GAT2 (ENSRROG00000019330) #24 OGFRL1 (ENSRROG00000032575) #28 ENSRROG00000040698 RIMS1 (ENSRROG00000043864) #29 Black snub-nosed monkey MODERN SPECIES 727 FAM135A (ENSRBIG00000034336) #21 SDHAF4 (ENSRBIG00000028720) #22 ZNF679 (ENSRBIG00000027806) Tarsier MODERN SPECIES 5084 COL19A1 (ENSTSYG00000001066) #19 COL9A1 (ENSTSYG00000001067) #20 FAM135A (ENSTSYG00000003628) #21 SDHAF4 (ENSTSYG00000001769) #22 SMAP1 (ENSTSYG00000012327) #23 ENSTSYG00000025693 B3GAT2 (ENSTSYG00000012329) #24 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a.r ENSGT00940000160370 ENSGT00940000155926 Lemuriformes ANCESTRAL SPECIES 3 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00960000187030 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a.r ENSGT00940000160370 ENSGT00940000155926 Mouse lemur MODERN SPECIES 28 ENSMICG00000046937 #32 CYP39A1 (ENSMICG00000017753) SLC25A27 (ENSMICG00000044777) OR2I1P (ENSMICG00000032426) UBD (ENSMICG00000035072) ENSMICG00000043719 #32 ENSMICG00000046611 #32 KCNQ5 (ENSMICG00000006444) #31 ENSMICG00000027311 ENSMICG00000028258 RIMS1 (ENSMICG00000008520) #29 LMBRD1 (ENSMICG00000038204) #18 COL19A1 (ENSMICG00000003072) #19 COL9A1 (ENSMICG00000003102) #20 FAM135A (ENSMICG00000027973) #21 SDHAF4 (ENSMICG00000001287) #22 SMAP1 (ENSMICG00000008161) #23 B3GAT2 (ENSMICG00000035385) #24 OGFRL1 (ENSMICG00000017326) #28 ADGRB3 (ENSMICG00000009819) #13 ENSMICG00000026811 ENSMICG00000046359 ENSMICG00000034194 PHF3 (ENSMICG00000029510) #9 ENSMICG00000047651 #8 ENSMICG00000041524 ENSMICG00000043683 LGSN (ENSMICG00000035402) #7 KHDRBS2 (ENSMICG00000010315) PRIM2 (ENSMICG00000045096) RAB23 (ENSMICG00000014037) Lemuriformes_a ANCESTRAL SPECIES 4 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064.a ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00940000162741.j ENSGT00940000160370 ENSGT00940000155926 Coquerels sifaka MODERN SPECIES 352 RBM11 (ENSPCOG00000024136) HSPA13 (ENSPCOG00000023238) LMBRD1 (ENSPCOG00000014047) #18 COL19A1 (ENSPCOG00000025383) #19 COL9A1 (ENSPCOG00000020452) #20 FAM135A (ENSPCOG00000009225) #21 SDHAF4 (ENSPCOG00000014933) #22 Greater bamboo lemur MODERN SPECIES 472 COL19A1 (ENSPSMG00000001351) #19 COL9A1 (ENSPSMG00000001412) #20 FAM135A (ENSPSMG00000001714) #21 SDHAF4 (ENSPSMG00000002368) #22 SMAP1 (ENSPSMG00000002512) #23 ENSPSMG00000002792 B3GAT2 (ENSPSMG00000002804) #24 OGFRL1 (ENSPSMG00000002822) #28 ENSPSMG00000002840 ENSPSMG00000002841 RIMS1 (ENSPSMG00000003296) #29 ENSPSMG00000004077 KCNQ5 (ENSPSMG00000004160) #31 ENSPSMG00000004214 ENSPSMG00000004217 #32 ENSPSMG00000004251 ENSPSMG00000004262 #32 ENSPSMG00000004267 DPPA5 (ENSPSMG00000004280) #34 Bushbaby MODERN SPECIES 150 ENSOGAG00000026698 KHDRBS2 (ENSOGAG00000015071) LGSN (ENSOGAG00000026375) #7 PHF3 (ENSOGAG00000006167) #9 ENSOGAG00000006174 ENSOGAG00000030859 ENSOGAG00000024129 ENSOGAG00000030000 ENSOGAG00000014129 #10 ENSOGAG00000001348 ADGRB3 (ENSOGAG00000002652) #13 LMBRD1 (ENSOGAG00000002658) #18 COL19A1 (ENSOGAG00000002662) #19 COL9A1 (ENSOGAG00000002670) #20 FAM135A (ENSOGAG00000013384) #21 SDHAF4 (ENSOGAG00000027850) #22 ENSOGAG00000030708 SMAP1 (ENSOGAG00000013402) #23 B3GAT2 (ENSOGAG00000013406) #24 OGFRL1 (ENSOGAG00000034907) #28 RIMS1 (ENSOGAG00000002914) #29 ENSOGAG00000032765 ENSOGAG00000028161 #31 ENSOGAG00000013952 ENSOGAG00000006102 KHDC3L (ENSOGAG00000016691) #35 OOEP (ENSOGAG00000013658) DDX43 (ENSOGAG00000013660) #36 CGAS (ENSOGAG00000013665) #37 MTO1 (ENSOGAG00000006692) ENSOGAG00000009152 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a Glires ANCESTRAL SPECIES 5 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a Rodentia ANCESTRAL SPECIES 6 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b Rodentia_B ANCESTRAL SPECIES 8 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 Myomorpha ANCESTRAL SPECIES 25 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 Muroidea ANCESTRAL SPECIES 69 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154526.h.i.b ENSGT00940000163367.g.a ENSGT00940000163367.g.b ENSGT00940000158206 ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B Cricetidae ANCESTRAL SPECIES 9 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064.e ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000163367.g.a ENSGT00940000154526.h.i.b ENSGT00940000163367.g.b ENSGT00940000158206 ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B ENSGT00940000156618 Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064.e ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01060000252711 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154526.h.i.b ENSGT00940000163367.g.a ENSGT00940000158206 ENSGT00940000166012 ENSGT00940000163367.h ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B ENSGT00940000156618 Northern American deer mouse MODERN SPECIES 13 Bag2 (ENSPEMG00000022944) Rab23 (ENSPEMG00000023271) Prim2 (ENSPEMG00000026079) Khdrbs2 (ENSPEMG00000011247) Lgsn (ENSPEMG00000008615) #7 ENSPEMG00000001468 ENSPEMG00000027646 Ptp4a1 (ENSPEMG00000028379) #8 Phf3 (ENSPEMG00000029836) #9 ENSPEMG00000027987 ENSPEMG00000025443 ENSPEMG00000018680 #13 Lmbrd1 (ENSPEMG00000007299) #18 Col9a1 (ENSPEMG00000019296) #20 Fam135a (ENSPEMG00000020097) #21 Sdhaf4 (ENSPEMG00000026560) #22 ENSPEMG00000015532 #23 B3gat2 (ENSPEMG00000018363) #24 Ogfrl1 (ENSPEMG00000025100) #28 ENSPEMG00000027863 #29 ENSPEMG00000031021 #29 Kcnq5 (ENSPEMG00000017858) #31 ENSPEMG00000029990 ENSPEMG00000021612 ENSPEMG00000021831 ENSPEMG00000030274 Crisp2 (ENSPEMG00000022961) Rhag (ENSPEMG00000003150) ENSPEMG00000027470 9130008F23Rik (ENSPEMG00000002757) Glyatl3 (ENSPEMG00000000995) Prairie vole MODERN SPECIES 352 Zfp451 (ENSMOCG00000019078) Bag2 (ENSMOCG00000019657) Rab23 (ENSMOCG00000000444) Prim2 (ENSMOCG00000006451) Khdrbs2 (ENSMOCG00000012101) Lgsn (ENSMOCG00000011973) #7 ENSMOCG00000019663 ENSMOCG00000000745 ENSMOCG00000022916 #9 ENSMOCG00000015621 #9 Adgrb3 (ENSMOCG00000012455) #13 Lmbrd1 (ENSMOCG00000021832) #18 Col19a1 (ENSMOCG00000022439) #19 Col9a1 (ENSMOCG00000002297) #20 Fam135a (ENSMOCG00000018950) #21 Sdhaf4 (ENSMOCG00000019322) #22 Smap1 (ENSMOCG00000012663) #23 B3gat2 (ENSMOCG00000008496) #24 ENSMOCG00000008718 #28 Rims1 (ENSMOCG00000016536) #29 Kcnq5 (ENSMOCG00000020453) #31 ENSMOCG00000020341 ENSMOCG00000005557 ENSMOCG00000004441 Rsph9 (ENSMOCG00000002026) ENSMOCG00000021207 Vegfa (ENSMOCG00000003577) 1600014C23Rik (ENSMOCG00000015577) Mrpl14 (ENSMOCG00000013481) Tmem63b (ENSMOCG00000014333) Capn11 (ENSMOCG00000012508) Cricetinae ANCESTRAL SPECIES 28 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064.e ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000154526.h.i.b ENSGT00940000163367.g.a ENSGT00940000163367.g.b ENSGT00940000158206 ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B ENSGT00940000156618 Chinese hamster chok1gshd MODERN SPECIES 165 Khdrbs2 (ENSCGRG00001022657) ENSCGRG00001007328 Lgsn (ENSCGRG00001019594) #7 ENSCGRG00001022558 ENSCGRG00001024456 #8 Phf3 (ENSCGRG00001023155) #9 ENSCGRG00001005668 ENSCGRG00001006125 ENSCGRG00001022265 ENSCGRG00001006543 Adgrb3 (ENSCGRG00001015538) #13 Lmbrd1 (ENSCGRG00001023565) #18 Col19a1 (ENSCGRG00001014158) #19 ENSCGRG00001022145 #19 Fam135a (ENSCGRG00001014193) #21 Sdhaf4 (ENSCGRG00001020774) #22 Smap1 (ENSCGRG00001022239) #23 B3gat2 (ENSCGRG00001020528) #24 Ogfrl1 (ENSCGRG00001008053) #28 Rims1 (ENSCGRG00001019526) #29 ENSCGRG00001017322 ##31 Kcnq5 (ENSCGRG00001009953) #31 ENSCGRG00001021036 ENSCGRG00001017591 Gsta3 (ENSCGRG00001023755) Tmem14a (ENSCGRG00001009902) Tram2 (ENSCGRG00001015106) Efhc1 (ENSCGRG00001022397) Paqr8 (ENSCGRG00001004665) Mcm3 (ENSCGRG00001009748) Il17f (ENSCGRG00001020910) Golden Hamster MODERN SPECIES 843 Adgrb3 (ENSMAUG00000004170) #13 Lmbrd1 (ENSMAUG00000018000) #18 Col19a1 (ENSMAUG00000000164) #19 Col9a1 (ENSMAUG00000017024) #20 Sdhaf4 (ENSMAUG00000000576) #22 Smap1 (ENSMAUG00000009559) #23 Murinae ANCESTRAL SPECIES 9 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00950000183043.a.b.b.a.a.b.p.a.b.a ENSGT00950000183043.a.b.b.a.a.b.p.a.b.b ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.b #32 ENSGT00940000154526.h.j ENSGT00940000163367.g.b ENSGT00940000158206 ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B ENSGT00940000156618 ENSGT00940000161882 Mus ANCESTRAL SPECIES 5 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000015219.c ENSGT00900000143521 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00950000183043.a.b.b.a.a.b.p.a.b.a ENSGT00950000183043.a.b.b.a.a.b.p.a.b.b ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.a #32 ENSGT00940000163367.g.b ENSGT00940000158206 ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B ENSGT00940000156618 ENSGT00940000161882 ENSGT00940000160697 Mus_A ANCESTRAL SPECIES 5 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000015219.c ENSGT00900000143521 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00950000183043.a.b.b.a.a.b.p.a.b.a ENSGT00950000183043.a.b.b.a.a.b.p.a.b.b ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.a #32 ENSGT00940000163367.g.b ENSGT00940000158206 ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B ENSGT00940000156618 ENSGT00940000161882 ENSGT00940000160697 Mus_B ANCESTRAL SPECIES 21 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000015219.c ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00950000183043.a.b.b.a.a.b.p.a.b.a ENSGT00950000183043.a.b.b.a.a.b.p.a.b.b ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000182985.b.b ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.a.b #32 ENSGT00940000163367.g.b ENSGT00940000158206 ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B ENSGT00940000156618 ENSGT00940000161882 Mus_C ANCESTRAL SPECIES 1 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000015219.c ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00950000183043.a.b.b.a.a.b.p.a.b.a ENSGT00950000183043.a.b.b.a.a.b.p.a.b.b ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000182985.b.b ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A.a.b #32 ENSGT00510000046470.a.b ENSGT00530000063528.A.a ENSGT00940000159860 ENSGT01050000244824.B ENSGT00940000156618 ENSGT00940000161882 ENSGT00940000160697 ENSGT00950000182848.c.b.b.b spretus MODERN SPECIES MGP_SPRETEiJ_G0014818 Semp2l1 (MGP_SPRETEiJ_G0014816) MGP_SPRETEiJ_G0014815 Khdrbs2 (MGP_SPRETEiJ_G0014814) Dnaaf6 (MGP_SPRETEiJ_G0014813) Lgsn (MGP_SPRETEiJ_G0014812) #7 MGP_SPRETEiJ_G0014811 Phf3 (MGP_SPRETEiJ_G0014809) #9 Gm597 (MGP_SPRETEiJ_G0014808) 4931408C20Rik (MGP_SPRETEiJ_G0014807) Adgrb3 (MGP_SPRETEiJ_G0014806) #13 Lmbrd1 (MGP_SPRETEiJ_G0014805) #18 Col19a1 (MGP_SPRETEiJ_G0014804) #19 Col9a1 (MGP_SPRETEiJ_G0014803) #20 Fam135a (MGP_SPRETEiJ_G0014802) #21 Sdhaf4 (MGP_SPRETEiJ_G0014801) #22 Smap1 (MGP_SPRETEiJ_G0014800) #23 B3gat2 (MGP_SPRETEiJ_G0014799) #24 Ogfrl1 (MGP_SPRETEiJ_G0014798) #28 Ppp1r14bl (MGP_SPRETEiJ_G0014797) MGP_SPRETEiJ_G0014796 #29 Kcnq5 (MGP_SPRETEiJ_G0014795) #31 Gsta3 (MGP_SPRETEiJ_G0014794) MGP_SPRETEiJ_G0014793 Tram2 (MGP_SPRETEiJ_G0014792) Efhc1 (MGP_SPRETEiJ_G0014791) Paqr8 (MGP_SPRETEiJ_G0014790) Mcm3 (MGP_SPRETEiJ_G0014789) Il17f (MGP_SPRETEiJ_G0014788) Il17a (MGP_SPRETEiJ_G0014787) MGP_SPRETEiJ_G0014786 Steppe mouse MODERN SPECIES 3352 ENSMSIG00000029066 4931408C20Rik (ENSMSIG00000029053) ENSMSIG00000029038 Adgrb3 (ENSMSIG00000028999) #13 Lmbrd1 (ENSMSIG00000028963) #18 Col19a1 (ENSMSIG00000028901) #19 Col9a1 (ENSMSIG00000028828) #20 Fam135a (ENSMSIG00000028791) #21 Sdhaf4 (ENSMSIG00000028785) #22 Smap1 (ENSMSIG00000028767) #23 B3gat2 (ENSMSIG00000028755) #24 Ogfrl1 (ENSMSIG00000028686) #28 Ppp1r14bl (ENSMSIG00000028668) Mouse MODERN SPECIES Gm6489 (ENSMUSG00000094215) Dnaaf6 (ENSMUSG00000026063) Lgsn (ENSMUSG00000050217) #7 4931428L18Rik (ENSMUSG00000086727) Gm5698 (ENSMUSG00000117091) Ptp4a1 (ENSMUSG00000117310) #8 Ptp4a1 (ENSMUSG00000026064) #8 Phf3 (ENSMUSG00000048874) #9 Gm597 (ENSMUSG00000048411) 4931408C20Rik (ENSMUSG00000073722) Adgrb3 (ENSMUSG00000033569) #13 Lmbrd1 (ENSMUSG00000073725) #18 Col19a1 (ENSMUSG00000026141) #19 Col9a1 (ENSMUSG00000026147) #20 Fam135a (ENSMUSG00000026153) #21 Sdhaf4 (ENSMUSG00000026154) #22 Smap1 (ENSMUSG00000026155) #23 B3gat2 (ENSMUSG00000026156) #24 Ogfrl1 (ENSMUSG00000026158) #28 Ppp1r14bl (ENSMUSG00000073730) Rims1 (ENSMUSG00000041670) #29 Kcnq5 (ENSMUSG00000028033) #31 Khdc1b (ENSMUSG00000085079) #32 Khdc1c (ENSMUSG00000041722) #32 Khdc1a (ENSMUSG00000067750) #32 Gsta3 (ENSMUSG00000025934) Tmem14a (ENSMUSG00000025933) Tram2 (ENSMUSG00000041779) Efhc1 (ENSMUSG00000041809) Paqr8 (ENSMUSG00000025931) Mcm3 (ENSMUSG00000041859) Ryukyu mouse MODERN SPECIES MGP_CAROLIEiJ_G0014011 MGP_CAROLIEiJ_G0014012 Khdrbs2 (MGP_CAROLIEiJ_G0014010) Dnaaf6 (MGP_CAROLIEiJ_G0014009) Lgsn (MGP_CAROLIEiJ_G0014008) #7 MGP_CAROLIEiJ_G0014007 MGP_CAROLIEiJ_G0014006 #8 Phf3 (MGP_CAROLIEiJ_G0014005) #9 Gm597 (MGP_CAROLIEiJ_G0014004) 4931408C20Rik (MGP_CAROLIEiJ_G0014003) Adgrb3 (MGP_CAROLIEiJ_G0014002) #13 Lmbrd1 (MGP_CAROLIEiJ_G0014001) #18 Col19a1 (MGP_CAROLIEiJ_G0014000) #19 Col9a1 (MGP_CAROLIEiJ_G0013999) #20 Fam135a (MGP_CAROLIEiJ_G0013998) #21 Sdhaf4 (MGP_CAROLIEiJ_G0013997) #22 Smap1 (MGP_CAROLIEiJ_G0013996) #23 B3gat2 (MGP_CAROLIEiJ_G0013995) #24 Ogfrl1 (MGP_CAROLIEiJ_G0013994) #28 Ppp1r14bl (MGP_CAROLIEiJ_G0013993) MGP_CAROLIEiJ_G0013992 #29 MGP_CAROLIEiJ_G0013991 #31 MGP_CAROLIEiJ_G0013990 #32 MGP_CAROLIEiJ_G0013989 #32 Tmem14a (MGP_CAROLIEiJ_G0013988) Tram2 (MGP_CAROLIEiJ_G0013987) Efhc1 (MGP_CAROLIEiJ_G0013986) Paqr8 (MGP_CAROLIEiJ_G0013985) Mcm3 (MGP_CAROLIEiJ_G0013984) Il17f (MGP_CAROLIEiJ_G0013983) Il17a (MGP_CAROLIEiJ_G0013982) Shrew mouse MODERN SPECIES 18 Rab23 (MGP_PahariEiJ_G0027261) Prim2 (MGP_PahariEiJ_G0027260) Khdrbs2 (MGP_PahariEiJ_G0027259) Dnaaf6 (MGP_PahariEiJ_G0027258) Lgsn (MGP_PahariEiJ_G0027257) #7 MGP_PahariEiJ_G0027256 MGP_PahariEiJ_G0027255 MGP_PahariEiJ_G0027254 MGP_PahariEiJ_G0027253 #8 Phf3 (MGP_PahariEiJ_G0027252) #9 Adgrb3 (MGP_PahariEiJ_G0027251) #13 Lmbrd1 (MGP_PahariEiJ_G0027250) #18 Col19a1 (MGP_PahariEiJ_G0027249) #19 Col9a1 (MGP_PahariEiJ_G0027248) #20 Fam135a (MGP_PahariEiJ_G0027247) #21 Sdhaf4 (MGP_PahariEiJ_G0027246) #22 Smap1 (MGP_PahariEiJ_G0027245) #23 B3gat2 (MGP_PahariEiJ_G0027244) #24 MGP_PahariEiJ_G0027243 #28 Ppp1r14bl (MGP_PahariEiJ_G0027242) MGP_PahariEiJ_G0027241 #29 Kcnq5 (MGP_PahariEiJ_G0027240) #31 Gsta3 (MGP_PahariEiJ_G0027239) Tmem14a (MGP_PahariEiJ_G0027238) Tram2 (MGP_PahariEiJ_G0027237) Efhc1 (MGP_PahariEiJ_G0027236) Paqr8 (MGP_PahariEiJ_G0027235) Mcm3 (MGP_PahariEiJ_G0027234) Il17f (MGP_PahariEiJ_G0027233) Il17a (MGP_PahariEiJ_G0027232) Pkhd1 (MGP_PahariEiJ_G0027231) Upper Galilee mountains blind mole rat MODERN SPECIES 1761 ENSNGAG00000012906 ENSNGAG00000016013 #13 Lmbrd1 (ENSNGAG00000014708) #18 Col19a1 (ENSNGAG00000014941) #19 Col9a1 (ENSNGAG00000001148) #20 Fam135a (ENSNGAG00000014492) #21 Sdhaf4 (ENSNGAG00000014116) #22 Smap1 (ENSNGAG00000011119) #23 B3gat2 (ENSNGAG00000020033) #24 ENSNGAG00000000286 #28 Rims1 (ENSNGAG00000006463) #29 Kcnq5 (ENSNGAG00000018452) #31 ENSNGAG00000001075 Lesser Egyptian jerboa MODERN SPECIES 50 Ptprd (ENSJJAG00000015529) ENSJJAG00000016769 Lgsn (ENSJJAG00000003290) #7 ENSJJAG00000000481 ENSJJAG00000014645 ENSJJAG00000006509 #9 ENSJJAG00000012750 #9 ENSJJAG00000006343 ENSJJAG00000022539 Adgrb3 (ENSJJAG00000010427) #13 ENSJJAG00000010158 Lmbrd1 (ENSJJAG00000021706) #18 Col19a1 (ENSJJAG00000009642) #19 Col9a1 (ENSJJAG00000023571) #20 Fam135a (ENSJJAG00000015770) #21 Sdhaf4 (ENSJJAG00000023910) #22 Smap1 (ENSJJAG00000020642) #23 B3gat2 (ENSJJAG00000020615) #24 ENSJJAG00000017502 #28 ENSJJAG00000000437 #29 Kcnq5 (ENSJJAG00000018050) #31 ENSJJAG00000012635 ENSJJAG00000012361 Supt3 (ENSJJAG00000000659) Runx2 (ENSJJAG00000020578) ENSJJAG00000018178 Enpp5 (ENSJJAG00000014824) Rcan2 (ENSJJAG00000017195) Cyp39a1 (ENSJJAG00000012273) Tdrd6 (ENSJJAG00000022534) Mep1a (ENSJJAG00000021229) Rodentia_A ANCESTRAL SPECIES 8 ENSGT00390000016954 ENSGT00940000162903.f ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT01100000264607 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00950000183029.B.c.a.r ENSGT01100000266454 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b Hystricomorpha ANCESTRAL SPECIES 39 ENSGT00940000156535 ENSGT00940000157334 ENSGT00940000160831 ENSGT00530000063353.a.b.a ENSGT01050000244879.b.a.b.b ENSGT00940000158416 ENSGT00640000091497.b ENSGT01050000244950.a.a.b ENSGT00390000008232 ENSGT00500000044869.a.a ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154550.a.f ENSGT00390000004660.C.a.a.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ENSGT00390000012588 ENSGT00390000013856 Hystricomorpha_a ANCESTRAL SPECIES 78 ENSGT00950000183066.a.a.a.n ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154550.a.f ENSGT00390000004660.C.a.a.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ENSGT00390000012588 ENSGT00390000013856 Guinea pig MODERN SPECIES 4 ENSCPOG00000023997 ADGRB3 (ENSCPOG00000000141) #13 LMBRD1 (ENSCPOG00000015075) #18 COL19A1 (ENSCPOG00000032293) #19 COL9A1 (ENSCPOG00000005651) #20 FAM135A (ENSCPOG00000007057) #21 SDHAF4 (ENSCPOG00000007065) #22 SMAP1 (ENSCPOG00000014957) #23 ENSCPOG00000040107 #24 ENSCPOG00000030138 #28 ENSCPOG00000031167 #29 KCNQ5 (ENSCPOG00000000120) #31 ENSCPOG00000035296 ENSCPOG00000036238 ELOVL4 (ENSCPOG00000006067) SH3BGRL2 (ENSCPOG00000036088) LCA5 (ENSCPOG00000005542) HMGN3 (ENSCPOG00000012407) PHIP (ENSCPOG00000006709) ENSCPOG00000026381 MEI4 (ENSCPOG00000022878) HTR1B (ENSCPOG00000000103) Hystricomorpha_b ANCESTRAL SPECIES 103 ENSGT00950000183066.a.a.a.n ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000164915 ENSGT00950000182802.C ENSGT00950000183107.a.a ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b Long-tailed chinchilla MODERN SPECIES 195 ENSCLAG00000000687 ADGRB3 (ENSCLAG00000000900) #13 LMBRD1 (ENSCLAG00000000350) #18 COL19A1 (ENSCLAG00000000460) #19 COL9A1 (ENSCLAG00000001060) #20 FAM135A (ENSCLAG00000000497) #21 SDHAF4 (ENSCLAG00000000854) #22 SMAP1 (ENSCLAG00000000914) #23 ENSCLAG00000000134 #24 ENSCLAG00000000186 #28 ENSCLAG00000000190 RIMS1 (ENSCLAG00000000513) #29 KCNQ5 (ENSCLAG00000001474) #31 ENSCLAG00000000607 COL12A1 (ENSCLAG00000000353) CD109 (ENSCLAG00000000522) Degu MODERN SPECIES 102 ENSODEG00000004325 #13 LMBRD1 (ENSODEG00000004262) #18 ENSODEG00000004181 COL19A1 (ENSODEG00000005899) #19 ENSODEG00000005617 #19 FAM135A (ENSODEG00000004939) #21 SDHAF4 (ENSODEG00000004921) #22 SMAP1 (ENSODEG00000004883) #23 B3GAT2 (ENSODEG00000004838) #24 ENSODEG00000004821 #28 ENSODEG00000019070 ENSODEG00000004801 ENSODEG00000004685 #29 KCNQ5 (ENSODEG00000004476) #31 ENSODEG00000004648 ENSODEG00000019046 ENSODEG00000004627 ELOVL4 (ENSODEG00000004597) ENSODEG00000004582 ENSODEG00000004441 ENSODEG00000019022 LCA5 (ENSODEG00000004406) Naked mole-rat female MODERN SPECIES 14 ENSHGLG00000001615 #19 COL9A1 (ENSHGLG00000002726) #20 FAM135A (ENSHGLG00000001394) #21 SDHAF4 (ENSHGLG00000034617) #22 SMAP1 (ENSHGLG00000003525) #23 B3GAT2 (ENSHGLG00000003085) #24 OGFRL1 (ENSHGLG00000033923) #28 ENSHGLG00000037204 #29 ENSHGLG00000002519 ENSHGLG00000001668 #31 TMEM30A (ENSHGLG00000001707) ENSHGLG00000045117 ENSHGLG00000048446 ELOVL4 (ENSHGLG00000001230) SH3BGRL2 (ENSHGLG00000002351) LCA5 (ENSHGLG00000043561) ENSHGLG00000001693 ENSHGLG00000001086 ENSHGLG00000002796 Sciuridae ANCESTRAL SPECIES 1 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a.r ENSGT00940000160370 ENSGT00940000155926 Marmotini ANCESTRAL SPECIES 18 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a.r ENSGT00940000160370 ENSGT00940000155926 Alpin marmot MODERN SPECIES 2 TPBG (ENSMMMG00000008079) IBTK (ENSMMMG00000008038) TENT5A (ENSMMMG00000008000) ENSMMMG00000007992 BCKDHB (ENSMMMG00000007961) TTK (ENSMMMG00000007904) ELOVL4 (ENSMMMG00000007894) SH3BGRL2 (ENSMMMG00000007878) ENSMMMG00000007865 ENSMMMG00000007848 ENSMMMG00000007837 COL12A1 (ENSMMMG00000007634) ENSMMMG00000007621 TMEM30A (ENSMMMG00000007574) FILIP1 (ENSMMMG00000007556) ENSMMMG00000007547 #22 SENP6 (ENSMMMG00000007505) MYO6 (ENSMMMG00000006155) IMPG1 (ENSMMMG00000006044) ENSMMMG00000006020 ENSMMMG00000006015 HTR1B (ENSMMMG00000005994) Marmotini_b ANCESTRAL SPECIES 197 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00940000160370 ENSGT00940000155926 Arctic ground squirrel MODERN SPECIES 88 ADGRB3 (ENSUPAG00010012154) #13 LMBRD1 (ENSUPAG00010012245) #18 COL19A1 (ENSUPAG00010012279) #19 COL9A1 (ENSUPAG00010012340) #20 FAM135A (ENSUPAG00010012439) #21 SDHAF4 (ENSUPAG00010012579) #22 ENSUPAG00010012584 SMAP1 (ENSUPAG00010012588) #23 B3GAT2 (ENSUPAG00010012603) #24 OGFRL1 (ENSUPAG00010012613) #28 ENSUPAG00010012628 ENSUPAG00010012630 #29 ENSUPAG00010012639 #29 KCNQ5 (ENSUPAG00010012650) #31 ENSUPAG00010012879 DPPA5 (ENSUPAG00010012891) #34 ENSUPAG00010012908 #35 ENSUPAG00010012926 ENSUPAG00010012946 CGAS (ENSUPAG00010012982) #37 MTO1 (ENSUPAG00010013013) Squirrel MODERN SPECIES 218 ADGRB3 (ENSSTOG00000005432) #13 LMBRD1 (ENSSTOG00000006409) #18 COL19A1 (ENSSTOG00000008137) #19 COL9A1 (ENSSTOG00000005082) #20 FAM135A (ENSSTOG00000021729) #21 SDHAF4 (ENSSTOG00000010244) #22 ENSSTOG00000031155 SMAP1 (ENSSTOG00000012249) #23 B3GAT2 (ENSSTOG00000023997) #24 ENSSTOG00000010939 #28 RIMS1 (ENSSTOG00000009823) #29 KCNQ5 (ENSSTOG00000015295) #31 Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005004743 KHDRBS2 (ENSSVLG00005004724) ENSSVLG00005004707 LGSN (ENSSVLG00005004693) #7 ENSSVLG00005004681 ENSSVLG00005004658 #8 PHF3 (ENSSVLG00005004613) #9 ENSSVLG00005004574 ENSSVLG00005004533 ENSSVLG00005004517 ENSSVLG00005015519 #13 LMBRD1 (ENSSVLG00005015441) #18 COL19A1 (ENSSVLG00005014940) #19 COL9A1 (ENSSVLG00005014082) #20 FAM135A (ENSSVLG00005013507) #21 SDHAF4 (ENSSVLG00005013015) #22 SMAP1 (ENSSVLG00005012850) #23 B3GAT2 (ENSSVLG00005012729) #24 OGFRL1 (ENSSVLG00005012614) #28 RIMS1 (ENSSVLG00005009840) #29 ENSSVLG00005009453 ENSSVLG00005009444 KCNQ5 (ENSSVLG00005009032) #31 ENSSVLG00005008906 #32 DPPA5 (ENSSVLG00005008877) #34 ENSSVLG00005008843 #35 ENSSVLG00005008820 DDX43 (ENSSVLG00005008735) #36 CGAS (ENSSVLG00005008686) #37 ENSSVLG00005008560 ENSSVLG00005008471 Lagomorpha ANCESTRAL SPECIES ENSGT00390000009155 #22 Pika MODERN SPECIES 2337 ENSOPRG00000011296 #22 Tree shrew MODERN SPECIES 6071 FAM135A (ENSTBEG00000003109) #21 SDHAF4 (ENSTBEG00000004344) #22 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00950000183029.B.c.a Eulipotyphla ANCESTRAL SPECIES ENSGT00390000009155 #22 Hedgehog MODERN SPECIES 4893 ENSEEUG00000011260 #22 Common shrew MODERN SPECIES 7105 COL19A1 (ENSSARG00000001152) #19 COL9A1 (ENSSARG00000001242) #20 FAM135A (ENSSARG00000001343) #21 ENSSARG00000001361 SDHAF4 (ENSSARG00000001365) #22 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000165345 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 Artiodactyla ANCESTRAL SPECIES 19 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 Suina ANCESTRAL SPECIES 18 ENSGT00940000158416 ENSGT00640000091497.b ENSGT01050000244950.a.a.b ENSGT00390000008232 ENSGT00500000044869.a.a ENSGT00940000156772 ENSGT00390000009168 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000155566 ENSGT00530000063775 ENSGT00950000182856.a.b ENSGT00940000153511.b Pig MODERN SPECIES FAM162B (ENSSSCG00000038522) ENSSSCG00000004261 KPNA5 (ENSSSCG00000004262) ZUP1 (ENSSSCG00000004263) RSPH4A (ENSSSCG00000023834) ENSSSCG00000032533 PTP4A1 (ENSSSCG00000025941) #8 PHF3 (ENSSSCG00000035259) #9 ENSSSCG00000004269 ADGRB3 (ENSSSCG00000004270) #13 LMBRD1 (ENSSSCG00000004272) #18 ENSSSCG00000061940 ##30 COL19A1 (ENSSSCG00000044472) #19 COL9A1 (ENSSSCG00000004274) #20 FAM135A (ENSSSCG00000004275) #21 SDHAF4 (ENSSSCG00000051834) #22 SMAP1 (ENSSSCG00000004276) #23 B3GAT2 (ENSSSCG00000026246) #24 ENSSSCG00000058784 OGFRL1 (ENSSSCG00000004279) #28 RIMS1 (ENSSSCG00000004280) #29 KCNQ5 (ENSSSCG00000004281) #31 ENSSSCG00000046325 ENSSSCG00000053554 DPPA5 (ENSSSCG00000004283) #34 ENSSSCG00000058051 #35 OOEP (ENSSSCG00000004285) ENSSSCG00000004287 CYB5R4 (ENSSSCG00000022994) MRAP2 (ENSSSCG00000026943) CEP162 (ENSSSCG00000004289) Chacoan peccary MODERN SPECIES 59 ENSCWAG00000008197 ADGRB3 (ENSCWAG00000008282) #13 LMBRD1 (ENSCWAG00000008700) #18 COL19A1 (ENSCWAG00000000048) #19 COL9A1 (ENSCWAG00000000201) #20 FAM135A (ENSCWAG00000000436) #21 SDHAF4 (ENSCWAG00000000537) #22 SMAP1 (ENSCWAG00000000558) #23 B3GAT2 (ENSCWAG00000000640) #24 ENSCWAG00000000657 OGFRL1 (ENSCWAG00000000668) #28 RIMS1 (ENSCWAG00000001044) #29 ENSCWAG00000005944 KCNQ5 (ENSCWAG00000006051) #31 ENSCWAG00000008542 DPPA5 (ENSCWAG00000008587) #34 ENSCWAG00000008652 DDX43 (ENSCWAG00000008720) #36 CYB5R4 (ENSCWAG00000008870) MRAP2 (ENSCWAG00000009069) CEP162 (ENSCWAG00000009113) TBX18 (ENSCWAG00000009292) Artiodactyla_a ANCESTRAL SPECIES 35 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 Artiodactyla_b ANCESTRAL SPECIES 18 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a Cetacea ANCESTRAL SPECIES 18 ENSGT00390000009083.f.b ENSGT00960000187030 ENSGT00390000013639 #7 ENSGT00940000154406.b.h.bc #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b.a ENSGT00940000160370 ENSGT00940000155926 Odontoceti ANCESTRAL SPECIES 18 ENSGT00390000009083.f.b ENSGT00960000187030 ENSGT00390000013639 #7 ENSGT00940000154406.b.h.bc #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00390000018085.a.b.a ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b.a ENSGT00940000160370 ENSGT00940000155926 Odontoceti_a ANCESTRAL SPECIES 16 ENSGT00390000013639 #7 ENSGT00940000154406.b.h.bc #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000163741 ENSGT00390000018085.a.b.a ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097.h.b.a ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b.a ENSGT00940000160370 ENSGT00940000155926 Dolphin MODERN SPECIES 2856 FAM135A (ENSTTRG00000015297) #21 SDHAF4 (ENSTTRG00000015317) #22 Odontoceti_b ANCESTRAL SPECIES 18 ENSGT00390000013639 #7 ENSGT00940000154406.b.h.bc #8 ENSGT00940000155080 #9 ENSGT00390000007535.b.b ENSGT00940000163741 ENSGT00390000018085.a.b.a ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935.f #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097.h.b.a ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b.a ENSGT00940000160370 ENSGT00940000155926 Vaquita MODERN SPECIES 3 LGSN (ENSPSNG00000021853) #7 ENSPSNG00000021838 PTP4A1 (ENSPSNG00000021823) #8 PHF3 (ENSPSNG00000021764) #9 ENSPSNG00000021727 ENSPSNG00000021684 ENSPSNG00000021653 ADGRB3 (ENSPSNG00000021581) #13 LMBRD1 (ENSPSNG00000021540) #18 COL19A1 (ENSPSNG00000021388) #19 COL9A1 (ENSPSNG00000021000) #20 SDHAF4 (ENSPSNG00000020825) #22 SMAP1 (ENSPSNG00000020734) #23 B3GAT2 (ENSPSNG00000020653) #24 OGFRL1 (ENSPSNG00000020599) #28 RIMS1 (ENSPSNG00000019041) #29 KCNQ5 (ENSPSNG00000017810) #31 ENSPSNG00000017669 DPPA5 (ENSPSNG00000017626) #34 ENSPSNG00000017518 #35 ENSPSNG00000017460 ENSPSNG00000017421 CGAS (ENSPSNG00000017365) #37 MTO1 (ENSPSNG00000017236) ENSPSNG00000017147 SLC17A5 (ENSPSNG00000017062) CD109 (ENSPSNG00000012621) Monodontidae ANCESTRAL SPECIES 18 ENSGT00390000013639 #7 ENSGT00940000154406.b.h.bc #8 ENSGT00940000155080 #9 ENSGT00390000007535.b.b ENSGT00940000163741 ENSGT00390000018085.a.b.a ENSGT00390000010352.r ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935.f #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097.h.b.a ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b.a ENSGT00940000160370 ENSGT00940000155926 Beluga whale MODERN SPECIES 1 ENSDLEG00000007630 ENSDLEG00000007625 ENSDLEG00000007578 #13 LMBRD1 (ENSDLEG00000007539) #18 ENSDLEG00000007531 #20 ENSDLEG00000007515 #20 FAM135A (ENSDLEG00000007500) #21 SDHAF4 (ENSDLEG00000007493) #22 SMAP1 (ENSDLEG00000007452) #23 B3GAT2 (ENSDLEG00000007430) #24 OGFRL1 (ENSDLEG00000007388) #28 RIMS1 (ENSDLEG00000004683) #29 KCNQ5 (ENSDLEG00000004241) #31 KHDC3L (ENSDLEG00000004220) #35 ENSDLEG00000004215 ENSDLEG00000004208 MB21D1 (ENSDLEG00000004204) #37 MTO1 (ENSDLEG00000004196) EEF1A1 (ENSDLEG00000004186) SLC17A5 (ENSDLEG00000004174) CD109 (ENSDLEG00000003996) ENSDLEG00000003964 COL12A1 (ENSDLEG00000003318) Narwhal MODERN SPECIES 301 LGSN (ENSMMNG00015019926) #7 ENSMMNG00015019954 ENSMMNG00015019973 ENSMMNG00015019989 PTP4A1 (ENSMMNG00015020013) #8 PHF3 (ENSMMNG00015020048) #9 ENSMMNG00015020082 ENSMMNG00015020119 ENSMMNG00015020177 ENSMMNG00015020202 ADGRB3 (ENSMMNG00015015610) #13 LMBRD1 (ENSMMNG00015015700) #18 COL19A1 (ENSMMNG00015015770) #19 COL9A1 (ENSMMNG00015015953) #20 FAM135A (ENSMMNG00015016471) #21 SDHAF4 (ENSMMNG00015016696) #22 SMAP1 (ENSMMNG00015016741) #23 B3GAT2 (ENSMMNG00015016819) #24 ENSMMNG00015016922 #28 RIMS1 (ENSMMNG00015017217) #29 KCNQ5 (ENSMMNG00015018265) #31 ENSMMNG00015018724 DPPA5 (ENSMMNG00015018758) #34 KHDC3L (ENSMMNG00015018781) #35 ENSMMNG00015018801 ENSMMNG00015018822 CGAS (ENSMMNG00015018886) #37 MTO1 (ENSMMNG00015018939) ENSMMNG00015018976 SLC17A5 (ENSMMNG00015019025) CD109 (ENSMMNG00015019089) Sperm whale MODERN SPECIES 1 LGSN (ENSPCTG00005017048) #7 ENSPCTG00005017155 ENSPCTG00005017167 ENSPCTG00005017247 PTP4A1 (ENSPCTG00005017280) #8 PHF3 (ENSPCTG00005017360) #9 ENSPCTG00005017478 ENSPCTG00005017677 ENSPCTG00005017715 ADGRB3 (ENSPCTG00005017752) #13 LMBRD1 (ENSPCTG00005018186) #18 COL19A1 (ENSPCTG00005018611) #19 COL9A1 (ENSPCTG00005019091) #20 ENSPCTG00005019770 FAM135A (ENSPCTG00005019869) #21 SDHAF4 (ENSPCTG00005020701) #22 SMAP1 (ENSPCTG00005020718) #23 B3GAT2 (ENSPCTG00005020761) #24 ENSPCTG00005020798 OGFRL1 (ENSPCTG00005020816) #28 RIMS1 (ENSPCTG00005021073) #29 ENSPCTG00005022226 #31 ENSPCTG00005022238 ENSPCTG00005022241 ENSPCTG00005022244 #34 ENSPCTG00005022250 #35 OOEP (ENSPCTG00005022255) DDX43 (ENSPCTG00005022263) #36 CGAS (ENSPCTG00005022275) #37 MTO1 (ENSPCTG00005022283) EEF1A1 (ENSPCTG00005022294) Blue whale MODERN SPECIES 3 LGSN (ENSBMSG00010022234) #7 ENSBMSG00010022230 ENSBMSG00010022227 PTP4A1 (ENSBMSG00010022225) #8 PHF3 (ENSBMSG00010022223) #9 ENSBMSG00010022220 ENSBMSG00010022219 ENSBMSG00010022218 ADGRB3 (ENSBMSG00010022215) #13 LMBRD1 (ENSBMSG00010022210) #18 COL19A1 (ENSBMSG00010022206) #19 COL9A1 (ENSBMSG00010022195) #20 FAM135A (ENSBMSG00010022183) #21 SDHAF4 (ENSBMSG00010022179) #22 SMAP1 (ENSBMSG00010022174) #23 B3GAT2 (ENSBMSG00010022170) #24 OGFRL1 (ENSBMSG00010022166) #28 RIMS1 (ENSBMSG00010018680) #29 ENSBMSG00010018164 KCNQ5 (ENSBMSG00010017092) #31 ENSBMSG00010017000 #34 ENSBMSG00010016975 #35 ENSBMSG00010016952 DDX43 (ENSBMSG00010016877) #36 ENSBMSG00010016861 CGAS (ENSBMSG00010016770) #37 MTO1 (ENSBMSG00010016724) ENSBMSG00010016674 SLC17A5 (ENSBMSG00010016640) Pecora ANCESTRAL SPECIES 19 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00950000185424 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00950000183029.B.c.a ENSGT00400000024746 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 20 PHF3 (ENSCHYG00000014550) #9 ENSCHYG00000015040 ENSCHYG00000015089 ENSCHYG00000015197 ENSCHYG00000015235 ENSCHYG00000015264 ENSCHYG00000015309 ENSCHYG00000015342 ENSCHYG00000015367 ADGRB3 (ENSCHYG00000015451) #13 ENSCHYG00000015821 LMBRD1 (ENSCHYG00000015877) #18 COL19A1 (ENSCHYG00000016043) #19 COL9A1 (ENSCHYG00000016409) #20 FAM135A (ENSCHYG00000017966) #21 ENSCHYG00000018786 #22 ENSCHYG00000018878 #23 B3GAT2 (ENSCHYG00000019057) #24 ENSCHYG00000019157 ENSCHYG00000019200 #28 RIMS1 (ENSCHYG00000019435) #29 ENSCHYG00000020960 OOEP (ENSCHYG00000021050) KHDC3L (ENSCHYG00000021116) #35 ENSCHYG00000021170 KCNQ5 (ENSCHYG00000021333) #31 CGAS (ENSCHYG00000023472) #37 MTO1 (ENSCHYG00000023513) ENSCHYG00000023575 SLC17A5 (ENSCHYG00000023670) CD109 (ENSCHYG00000023895) Yarkand deer MODERN SPECIES 19 GAREM1 (ENSCHYG00000014077) MEP1B (ENSCHYG00000026672) ENSCHYG00000026650 RNF125 (ENSCHYG00000026634) TRAPPC8 (ENSCHYG00000026442) B4GALT6 (ENSCHYG00000026327) TTR (ENSCHYG00000026307) DSG3 (ENSCHYG00000026242) DSG4 (ENSCHYG00000026207) DSG1 (ENSCHYG00000026189) ENSCHYG00000026180 DSC2 (ENSCHYG00000026115) DSC3 (ENSCHYG00000026008) ENSCHYG00000025965 ENSCHYG00000025978 ENSCHYG00000025944 #22 CDH2 (ENSCHYG00000025907) CHST9 (ENSCHYG00000025890) AQP4 (ENSCHYG00000025868) KCTD1 (ENSCHYG00000025850) TAF4B (ENSCHYG00000025823) PSMA8 (ENSCHYG00000025804) SS18 (ENSCHYG00000025725) ZNF521 (ENSCHYG00000025646) ENSCHYG00000025622 HRH4 (ENSCHYG00000025602) IMPACT (ENSCHYG00000025487) OSBPL1A (ENSCHYG00000025361) ENSCHYG00000025325 TTC39C (ENSCHYG00000025288) LAMA3 (ENSCHYG00000022890) Percora_a ANCESTRAL SPECIES 21 ENSGT00960000187030 ENSGT00940000154406.b.h.`c #8 ENSGT00940000155080 #9 ENSGT00950000185424 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a ENSGT00950000183029.B.c.a ENSGT00400000024746 Siberian musk deer MODERN SPECIES 1149 LMBRD1 (ENSMMSG00000015727) #18 COL9A1 (ENSMMSG00000015793) #20 FAM135A (ENSMMSG00000016041) #21 SDHAF4 (ENSMMSG00000016407) #22 Bovidae ANCESTRAL SPECIES 21 ENSGT00960000187030 ENSGT00940000154406.b.h.`c #8 ENSGT00940000155080 #9 ENSGT00950000185424 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 ENSGT00940000155926 Caprinae ANCESTRAL SPECIES 18 ENSGT00390000003161 ENSGT00390000013770 ENSGT00940000161563 ENSGT00940000153244.B.z ENSGT00940000154712 ENSGT00390000000306 ENSGT00940000163050 ENSGT00940000162306 ENSGT00940000154406.b.h.`c #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 Rambouillet Sheep MODERN SPECIES 23 EML5 (ENSOARG00020014231) ENSOARG00020013562 PTPN21 (ENSOARG00020013389) SPATA7 (ENSOARG00020013127) KCNK10 (ENSOARG00020012796) GPR65 (ENSOARG00020012711) GALC (ENSOARG00020012425) ENSOARG00020012395 FLRT2 (ENSOARG00020012333) ENSOARG00020012284 ENSOARG00020012235 ENSOARG00020012199 ENSOARG00020012179 ENSOARG00020012109 SEL1L (ENSOARG00020011561) ENSOARG00020011523 #22 GTF2A1 (ENSOARG00020011276) ENSOARG00020011233 TSHR (ENSOARG00020010887) CEP128 (ENSOARG00020009437) ENSOARG00020009356 ENSOARG00020008928 NRXN3 (ENSOARG00020005395) ENSOARG00020005284 ENSOARG00020005271 ENSOARG00020005261 ADCK1 (ENSOARG00020005164) SNW1 (ENSOARG00020005120) SLIRP (ENSOARG00020005039) ALKBH1 (ENSOARG00020004970) SPTLC2 (ENSOARG00020004916) Goat MODERN SPECIES 5 ZNF16 (ENSCHIG00000020215) ZNF250 (ENSCHIG00000022921) ENSCHIG00000008396 ENSCHIG00000017744 #8 PHF3 (ENSCHIG00000014650) #9 ENSCHIG00000016048 ENSCHIG00000014408 ENSCHIG00000024399 ENSCHIG00000021052 ENSCHIG00000010208 ADGRB3 (ENSCHIG00000014726) #13 LMBRD1 (ENSCHIG00000008693) #18 ENSCHIG00000016312 #20 FAM135A (ENSCHIG00000013509) #21 ENSCHIG00000008368 SDHAF4 (ENSCHIG00000006266) #22 SMAP1 (ENSCHIG00000015060) #23 B3GAT2 (ENSCHIG00000018487) #24 OGFRL1 (ENSCHIG00000021433) #28 RIMS1 (ENSCHIG00000011011) #29 ENSCHIG00000010809 KCNQ5 (ENSCHIG00000018348) #31 ENSCHIG00000021014 #35 OOEP (ENSCHIG00000024113) ENSCHIG00000017351 Bovinae ANCESTRAL SPECIES 31 ENSGT00960000187030 ENSGT00940000154406.b.h.`c #8 ENSGT00940000155080 #9 ENSGT00950000185424 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT01100000263506.a.f.a.a.a.b ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000158351.v.b.b ENSGT00910000148442 Bos ANCESTRAL SPECIES 19 ENSGT00960000187030 ENSGT00940000154406.b.h.`c #8 ENSGT00940000155080 #9 ENSGT00940000157325 ENSGT00960000190826 ENSGT00910000148601 ENSGT00950000185424 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT01100000263506.a.f.a.a.a.b ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000158351.v.b.b ENSGT00910000148442 Bos_b ANCESTRAL SPECIES 24 ENSGT01100000263496.D.b.b.a.a.b.a.a.c.a.a ENSGT00940000154406.b.h.yb.a #8 ENSGT00940000155080 #9 ENSGT00940000157325 ENSGT00960000190826 ENSGT00910000148601 ENSGT00940000155081.D #13 ENSGT00940000153607.c.a.c.a ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT01100000263506.a.f.a.a.a.b ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000158351.v.b.b ENSGT00910000148442 Hybrid Bos Indicus MODERN SPECIES 28 ENSBIXG00005023225 PTP4A1 (ENSBIXG00005023192) #8 PHF3 (ENSBIXG00005023107) #9 ENSBIXG00005022959 ENSBIXG00005022893 ENSBIXG00005022842 ENSBIXG00005006669 ENSBIXG00005005998 ADGRB3 (ENSBIXG00005022725) #13 ENSBIXG00005022527 LMBRD1 (ENSBIXG00005003831) #18 COL19A1 (ENSBIXG00005005996) #19 ENSBIXG00005022305 COL9A1 (ENSBIXG00005007847) #20 FAM135A (ENSBIXG00005022060) #21 SDHAF4 (ENSBIXG00005007360) #22 ENSBIXG00005021756 SMAP1 (ENSBIXG00005003657) #23 ENSBIXG00005021619 B3GAT2 (ENSBIXG00005021604) #24 OGFRL1 (ENSBIXG00005021578) #28 ENSBIXG00005021520 RIMS1 (ENSBIXG00005021046) #29 KCNQ5 (ENSBIXG00005016452) #31 ENSBIXG00005015694 #35 OOEP (ENSBIXG00005015674) ENSBIXG00005015655 ENSBIXG00005015639 CGAS (ENSBIXG00005015608) #37 MTO1 (ENSBIXG00005015597) EEF1A1 (ENSBIXG00005015547) Cow MODERN SPECIES 28 OR4P45 (ENSBTAG00000054093) OR5D65 (ENSBTAG00000036273) PTP4A1 (ENSBTAG00000002275) #8 PHF3 (ENSBTAG00000019139) #9 ENSBTAG00000050873 ENSBTAG00000055087 ENSBTAG00000054972 ENSBTAG00000052141 ENSBTAG00000051256 ADGRB3 (ENSBTAG00000015335) #13 ENSBTAG00000054672 LMBRD1 (ENSBTAG00000016164) #18 COL9A1 (ENSBTAG00000035054) #20 ENSBTAG00000045999 FAM135A (ENSBTAG00000002171) #21 SDHAF4 (ENSBTAG00000027049) #22 SMAP1 (ENSBTAG00000038190) #23 B3GAT2 (ENSBTAG00000020817) #24 ENSBTAG00000053784 #17 OGFRL1 (ENSBTAG00000016374) #28 ENSBTAG00000048046 RIMS1 (ENSBTAG00000020238) #29 KCNQ5 (ENSBTAG00000007791) #31 KHDC3L (ENSBTAG00000034925) #35 OOEP (ENSBTAG00000019600) ENSBTAG00000021814 CGAS (ENSBTAG00000000892) #37 MTO1 (ENSBTAG00000016839) EEF1A1 (ENSBTAG00000014534) SLC17A5 (ENSBTAG00000044053) CD109 (ENSBTAG00000013222) Bos_a ANCESTRAL SPECIES 18 ENSGT00960000187030 ENSGT00940000154406.b.h.`c #8 ENSGT00940000155080 #9 ENSGT00940000157325 ENSGT00960000190826 ENSGT00910000148601 ENSGT00950000185424 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT01100000263506.a.f.a.a.a.b ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT01100000263480.a.b.b.a.b.b.b.b.a.b.a.a.b ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00550000074975 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 ENSGT00940000155926 Domestic yak MODERN SPECIES 1 PTP4A1 (ENSBGRG00000023103) #8 PHF3 (ENSBGRG00000022995) #9 ENSBGRG00000022955 ENSBGRG00000022880 ENSBGRG00000022858 ENSBGRG00000022829 ENSBGRG00000022824 ENSBGRG00000022805 ADGRB3 (ENSBGRG00000022596) #13 ENSBGRG00000022581 LMBRD1 (ENSBGRG00000022550) #18 COL19A1 (ENSBGRG00000022477) #19 COL9A1 (ENSBGRG00000022165) #20 ENSBGRG00000022126 FAM135A (ENSBGRG00000021710) #21 SDHAF4 (ENSBGRG00000021672) #22 ENSBGRG00000021647 SMAP1 (ENSBGRG00000021416) #23 B3GAT2 (ENSBGRG00000021318) #24 OGFRL1 (ENSBGRG00000021196) #28 ENSBGRG00000021168 RIMS1 (ENSBGRG00000013217) #29 ENSBGRG00000012920 KCNQ5 (ENSBGRG00000009774) #31 ENSBGRG00000009633 #35 ENSBGRG00000009579 ENSBGRG00000009400 CGAS (ENSBGRG00000009337) #37 MTO1 (ENSBGRG00000009205) EEF1A1 (ENSBGRG00000009070) SLC17A5 (ENSBGRG00000008882) Wild yak MODERN SPECIES 629 COL19A1 (ENSBMUG00000016208) #19 COL9A1 (ENSBMUG00000016347) #20 FAM135A (ENSBMUG00000016507) #21 SDHAF4 (ENSBMUG00000016532) #22 American bison MODERN SPECIES 3184 ENSBBBG00000004275 ENSBBBG00000017270 ENSBBBG00000017291 ADGRB3 (ENSBBBG00000017379) #13 LMBRD1 (ENSBBBG00000017604) #18 COL19A1 (ENSBBBG00000017675) #19 COL9A1 (ENSBBBG00000017784) #20 ENSBBBG00000004384 FAM135A (ENSBBBG00000008563) #21 SDHAF4 (ENSBBBG00000018050) #22 SMAP1 (ENSBBBG00000018079) #23 B3GAT2 (ENSBBBG00000018087) #24 Camelidae ANCESTRAL SPECIES 108 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00960000187030 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00900000143526 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 Alpaca MODERN SPECIES 3591 COL9A1 (ENSVPAG00000004800) #20 FAM135A (ENSVPAG00000004803) #21 SDHAF4 (ENSVPAG00000004805) #22 Arabian camel MODERN SPECIES 34 ENSCDRG00005020762 ENSCDRG00005020763 ENSCDRG00005020766 LGSN (ENSCDRG00005020776) #7 PTP4A1 (ENSCDRG00005020789) #8 ENSCDRG00005020799 ENSCDRG00005020804 ENSCDRG00005020808 PHF3 (ENSCDRG00005020819) #9 ENSCDRG00005020861 ADGRB3 (ENSCDRG00005020890) #13 LMBRD1 (ENSCDRG00005020929) #18 COL19A1 (ENSCDRG00005020944) #19 COL9A1 (ENSCDRG00005020985) #20 FAM135A (ENSCDRG00005000145) #21 SDHAF4 (ENSCDRG00005000353) #22 SMAP1 (ENSCDRG00005000422) #23 B3GAT2 (ENSCDRG00005000488) #24 ENSCDRG00005000508 #28 RIMS1 (ENSCDRG00005000672) #29 ENSCDRG00005001483 ENSCDRG00005001494 KCNQ5 (ENSCDRG00005001529) #31 ENSCDRG00005001640 #32 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000165345 ENSGT00940000168678 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 Carnivora ANCESTRAL SPECIES 4 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000165345 ENSGT00940000168678 ENSGT00940000154353.B.`b #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a Caniformia ANCESTRAL SPECIES 3 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000165345 ENSGT00940000168678 ENSGT00940000154353.B.`b #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b Caniformia_b ANCESTRAL SPECIES 6 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00950000185796 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000165345 ENSGT00940000168678 ENSGT00940000154353.B.`b #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.a.x Ursidae ANCESTRAL SPECIES 35 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00960000187030 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00950000185796 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT01050000245142.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000165345 ENSGT00940000168678 ENSGT00940000154353.B.`b #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.a.x Ursus ANCESTRAL SPECIES 95 ENSGT00900000143168 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00950000185796 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00390000018730.B #28 ENSGT01050000245142.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000165345 ENSGT00940000168678 ENSGT00940000154353.B.`b #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT00950000183029.B.c.b.b.a.x ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C Polar bear MODERN SPECIES 117 ENSUMAG00000010659 LGSN (ENSUMAG00000010664) #7 PTP4A1 (ENSUMAG00000010680) #8 PHF3 (ENSUMAG00000010700) #9 ENSUMAG00000010884 ENSUMAG00000010892 ENSUMAG00000010900 ENSUMAG00000010904 #13 LMBRD1 (ENSUMAG00000010942) #18 ENSUMAG00000011261 #20 FAM135A (ENSUMAG00000011293) #21 SDHAF4 (ENSUMAG00000011880) #22 SMAP1 (ENSUMAG00000011886) #23 OGFRL1 (ENSUMAG00000011900) #28 ENSUMAG00000011919 ENSUMAG00000011923 RIMS1 (ENSUMAG00000011970) #29 ENSUMAG00000012262 #31 ENSUMAG00000012265 ENSUMAG00000012267 DPPA5 (ENSUMAG00000012276) #34 KHDC3L (ENSUMAG00000012278) #35 OOEP (ENSUMAG00000012283) ENSUMAG00000012291 ENSUMAG00000012301 MTO1 (ENSUMAG00000012307) ENSUMAG00000012312 American black bear MODERN SPECIES 3249 ENSUAMG00000002884 #21 SDHAF4 (ENSUAMG00000002876) #22 Giant Panda MODERN SPECIES 10 ENSAMEG00000006825 PRIM2 (ENSAMEG00000005322) ENSAMEG00000007111 LGSN (ENSAMEG00000002452) #7 PTP4A1 (ENSAMEG00000002438) #8 ENSAMEG00000030950 PHF3 (ENSAMEG00000002413) #9 ENSAMEG00000024940 ENSAMEG00000029288 ENSAMEG00000028374 ADGRB3 (ENSAMEG00000015365) #13 LMBRD1 (ENSAMEG00000015357) #18 COL19A1 (ENSAMEG00000015338) #19 COL9A1 (ENSAMEG00000012170) #20 FAM135A (ENSAMEG00000012250) #21 SDHAF4 (ENSAMEG00000012283) #22 SMAP1 (ENSAMEG00000012284) #23 B3GAT2 (ENSAMEG00000012291) #24 ENSAMEG00000025596 ##30 ENSAMEG00000004858 #28 ENSAMEG00000008048 RIMS1 (ENSAMEG00000007931) #29 KCNQ5 (ENSAMEG00000025830) #31 DPPA5 (ENSAMEG00000007892) #34 ENSAMEG00000028704 #35 OOEP (ENSAMEG00000007880) ENSAMEG00000007851 CGAS (ENSAMEG00000023979) #37 MTO1 (ENSAMEG00000007806) ENSAMEG00000026819 SLC17A5 (ENSAMEG00000007742) Mustelinae ANCESTRAL SPECIES 65 ENSGT00950000185796 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B.`b #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.a.x ENSGT00940000160370 ENSGT00940000155926 American mink MODERN SPECIES 163 ENSNVIG00000002791 ENSNVIG00000002805 ADGRB3 (ENSNVIG00000002818) #13 ENSNVIG00000002934 LMBRD1 (ENSNVIG00000002950) #18 COL19A1 (ENSNVIG00000002991) #19 COL9A1 (ENSNVIG00000003118) #20 FAM135A (ENSNVIG00000003325) #21 CF057 (ENSNVIG00000003750) #22 Ferret MODERN SPECIES 309 ENSMPUG00000005643 ADGRB3 (ENSMPUG00000005674) #13 LMBRD1 (ENSMPUG00000005691) #18 COL19A1 (ENSMPUG00000005703) #19 COL9A1 (ENSMPUG00000005963) #20 FAM135A (ENSMPUG00000006167) #21 SDHAF4 (ENSMPUG00000006181) #22 SMAP1 (ENSMPUG00000006196) #23 B3GAT2 (ENSMPUG00000006208) #24 OGFRL1 (ENSMPUG00000006251) #28 ENSMPUG00000006262 ENSMPUG00000006272 RIMS1 (ENSMPUG00000006275) #29 Canidae ANCESTRAL SPECIES 6 ENSGT00390000017590.i.a ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00950000182802.B.a.a.a.a.i.d.c.b ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B.`b #34 ENSGT00940000162601.s #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 ENSGT00940000155926 Canis_lupus ANCESTRAL SPECIES 11 ENSGT00940000157134 ENSGT00390000008281.p ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000161804.c.a.b ENSGT00940000163741 ENSGT00390000010355.l ENSGT00940000166528.b ENSGT00950000182802.B.a.a.a.a.i.d.c.b ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B.`b #34 ENSGT00940000162601.s #35 ENSGT00940000162097 ENSGT00940000163229.b ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.b.b.j ENSGT00940000160370 ENSGT00940000155926 Dog MODERN SPECIES 3 ENSCAFG00845007043 LGSN (ENSCAFG00845007217) #7 PTP4A1 (ENSCAFG00845007421) #8 PHF3 (ENSCAFG00845007530) #9 ENSCAFG00845007728 ENSCAFG00845007847 ENSCAFG00845007925 ENSCAFG00845007970 ENSCAFG00845007982 ENSCAFG00845008005 ##30 ADGRB3 (ENSCAFG00845008060) #13 LMBRD1 (ENSCAFG00845008243) #18 COL19A1 (ENSCAFG00845008400) #19 COL9A1 (ENSCAFG00845008634) #20 FAM135A (ENSCAFG00845009022) #21 SDHAF4 (ENSCAFG00845009642) #22 SMAP1 (ENSCAFG00845009742) #23 B3GAT2 (ENSCAFG00845010055) #24 ENSCAFG00845010137 OGFRL1 (ENSCAFG00845010164) #28 RIMS1 (ENSCAFG00845010428) #29 KCNQ5 (ENSCAFG00845011313) #31 ENSCAFG00845011834 #32 DPPA5 (ENSCAFG00845011867) #34 ENSCAFG00845011900 #35 OOEP (ENSCAFG00845011927) DDX43 (ENSCAFG00845011968) #36 CGAS (ENSCAFG00845012039) #37 MTO1 (ENSCAFG00845012090) EEF1A1 (ENSCAFG00845012150) SLC17A5 (ENSCAFG00845012197) Dingo MODERN SPECIES 370 ENSCAFG00020008110 ENSCAFG00020008127 ENSCAFG00020008140 ##30 ENSCAFG00020008167 #13 ENSCAFG00020008198 LMBRD1 (ENSCAFG00020008206) #18 ENSCAFG00020008319 #20 FAM135A (ENSCAFG00020008381) #21 SDHAF4 (ENSCAFG00020009223) #22 ENSCAFG00020009226 SMAP1 (ENSCAFG00020009239) #23 ENSCAFG00020009243 ENSCAFG00020009249 #24 OGFRL1 (ENSCAFG00020009281) #28 RIMS1 (ENSCAFG00020009359) #29 KCNQ5 (ENSCAFG00020009938) #31 ENSCAFG00020010018 #34 ENSCAFG00020010020 #35 OOEP (ENSCAFG00020010023) ENSCAFG00020010029 CGAS (ENSCAFG00020010035) #37 MTO1 (ENSCAFG00020010043) SLC17A5 (ENSCAFG00020010051) CD109 (ENSCAFG00020010059) Red fox MODERN SPECIES 7 ENSVVUG00000008860 ENSVVUG00000008891 ENSVVUG00000008894 ENSVVUG00000008901 ENSVVUG00000008911 ENSVVUG00000008913 ENSVVUG00000008929 ENSVVUG00000008930 ENSVVUG00000008948 ADGRB3 (ENSVVUG00000008980) #13 ENSVVUG00000009318 LMBRD1 (ENSVVUG00000009340) #18 COL19A1 (ENSVVUG00000009362) #19 ENSVVUG00000009380 #20 FAM135A (ENSVVUG00000009408) #21 SDHAF4 (ENSVVUG00000009454) #22 SMAP1 (ENSVVUG00000009458) #23 ENSVVUG00000009464 B3GAT2 (ENSVVUG00000009508) #24 OGFRL1 (ENSVVUG00000009555) #28 ENSVVUG00000009573 ENSVVUG00000009586 RIMS1 (ENSVVUG00000009659) #29 Felidae ANCESTRAL SPECIES 5 ENSGT00390000009790 ENSGT00940000165410.b.a ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000154451.l.c.a ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.B.ab #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00910000148442 Panthera ANCESTRAL SPECIES 7 ENSGT00390000009790 ENSGT00940000165410.b.a ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00390000015813.s ENSGT00940000163741 ENSGT00940000154451.l.c.a ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.B.ab #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00910000148442 Tiger MODERN SPECIES 319 ADGRB3 (ENSPTIG00000017381) #13 ENSPTIG00000004092 LMBRD1 (ENSPTIG00000005792) #18 ENSPTIG00000006434 COL19A1 (ENSPTIG00000009608) #19 COL9A1 (ENSPTIG00000012131) #20 FAM135A (ENSPTIG00000019739) #21 SDHAF4 (ENSPTIG00000013609) #22 SMAP1 (ENSPTIG00000014278) #23 ENSPTIG00000017257 #24 OGFRL1 (ENSPTIG00000018139) #28 ENSPTIG00000018823 #29 ENSPTIG00000019209 #29 KCNQ5 (ENSPTIG00000011417) #31 DPPA5 (ENSPTIG00000016742) #34 KHDC3L (ENSPTIG00000017035) #35 OOEP (ENSPTIG00000017366) ENSPTIG00000017842 CGAS (ENSPTIG00000020140) #37 MTO1 (ENSPTIG00000001836) ENSPTIG00000007871 SLC17A5 (ENSPTIG00000012062) CD109 (ENSPTIG00000012445) Panthera_a ANCESTRAL SPECIES 4 ENSGT00940000165410.b.a ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00390000015813.s ENSGT00940000163741 ENSGT00940000154451.l.c.a ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000168566 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.B.ab #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000164259 #36 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00910000148442 lion MODERN SPECIES 5 KHDRBS2 (ENSPLOG00000007607) ENSPLOG00000007641 LGSN (ENSPLOG00000007674) #7 ENSPLOG00000007739 PTP4A1 (ENSPLOG00000007765) #8 PHF3 (ENSPLOG00000007803) #9 ENSPLOG00000007839 ENSPLOG00000007863 ADGRB3 (ENSPLOG00000007947) #13 ENSPLOG00000008174 LMBRD1 (ENSPLOG00000008224) #18 COL19A1 (ENSPLOG00000008321) #19 ENSPLOG00000008632 COL9A1 (ENSPLOG00000008829) #20 FAM135A (ENSPLOG00000009519) #21 SDHAF4 (ENSPLOG00000009984) #22 SMAP1 (ENSPLOG00000010021) #23 B3GAT2 (ENSPLOG00000010057) #24 OGFRL1 (ENSPLOG00000010118) #28 RIMS1 (ENSPLOG00000011108) #29 KCNQ5 (ENSPLOG00000014429) #31 ENSPLOG00000015538 ENSPLOG00000015585 DPPA5 (ENSPLOG00000015621) #34 KHDC3L (ENSPLOG00000015667) #35 OOEP (ENSPLOG00000015739) DDX43 (ENSPLOG00000015808) #36 CGAS (ENSPLOG00000015938) #37 MTO1 (ENSPLOG00000016071) EEF1A1 (ENSPLOG00000016117) SLC17A5 (ENSPLOG00000016238) leopard MODERN SPECIES 70 ENSPPRG00000008262 KHDRBS2 (ENSPPRG00000008147) LGSN (ENSPPRG00000008013) #7 PTP4A1 (ENSPPRG00000007849) #8 PHF3 (ENSPPRG00000007453) #9 ENSPPRG00000007035 ENSPPRG00000007017 ENSPPRG00000006818 ENSPPRG00000006703 ADGRB3 (ENSPPRG00000006507) #13 ENSPPRG00000005370 LMBRD1 (ENSPPRG00000004842) #18 ENSPPRG00000004177 COL9A1 (ENSPPRG00000003665) #20 FAM135A (ENSPPRG00000001943) #21 SDHAF4 (ENSPPRG00000001002) #22 SMAP1 (ENSPPRG00000000953) #23 ENSPPRG00000020301 B3GAT2 (ENSPPRG00000019185) #24 ENSPPRG00000017717 OGFRL1 (ENSPPRG00000016406) #28 RIMS1 (ENSPPRG00000013353) #29 KCNQ5 (ENSPPRG00000002204) #31 DPPA5 (ENSPPRG00000018919) #34 KHDC3L (ENSPPRG00000018331) #35 OOEP (ENSPPRG00000014686) DDX43 (ENSPPRG00000014528) #36 CGAS (ENSPPRG00000014097) #37 MTO1 (ENSPPRG00000013725) EEF1A1 (ENSPPRG00000011684) SLC17A5 (ENSPPRG00000009855) Cat MODERN SPECIES 236 ENSFCAG00000045670 LGSN (ENSFCAG00000027872) #7 PTP4A1 (ENSFCAG00000001199) #8 ENSFCAG00000051059 PHF3 (ENSFCAG00000030443) #9 ENSFCAG00000049357 ENSFCAG00000024482 ADGRB3 (ENSFCAG00000002654) #13 ENSFCAG00000025373 LMBRD1 (ENSFCAG00000025453) #18 COL19A1 (ENSFCAG00000046703) #19 ENSFCAG00000049616 ENSFCAG00000036453 COL9A1 (ENSFCAG00000010489) #20 FAM135A (ENSFCAG00000023949) #21 SDHAF4 (ENSFCAG00000026799) #22 SMAP1 (ENSFCAG00000007247) #23 B3GAT2 (ENSFCAG00000024951) #24 OGFRL1 (ENSFCAG00000037623) #28 RIMS1 (ENSFCAG00000032381) #29 KCNQ5 (ENSFCAG00000024484) #31 DPPA5 (ENSFCAG00000006769) #34 ENSFCAG00000006770 #35 OOEP (ENSFCAG00000006772) DDX43 (ENSFCAG00000031631) CGAS (ENSFCAG00000021963) #37 MTO1 (ENSFCAG00000029600) EEF1A1 (ENSFCAG00000030977) SLC17A5 (ENSFCAG00000012651) CD109 (ENSFCAG00000012653) COL12A1 (ENSFCAG00000027408) Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT01100000263980 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00950000183029.B.c.b.b.b ENSGT00940000160370 Chiroptera ANCESTRAL SPECIES 3 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164215 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C Microchiroptera ANCESTRAL SPECIES 4 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C Greater horseshoe bat MODERN SPECIES 21 PRIM2 (ENSRFEG00010006678) ENSRFEG00010006718 ENSRFEG00010006743 KHDRBS2 (ENSRFEG00010006772) LGSN (ENSRFEG00010006854) #7 ENSRFEG00010006996 PTP4A1 (ENSRFEG00010007023) #8 PHF3 (ENSRFEG00010007114) #9 ENSRFEG00010008144 ADGRB3 (ENSRFEG00010008203) #13 LMBRD1 (ENSRFEG00010008627) #18 ENSRFEG00010008697 COL19A1 (ENSRFEG00010008757) #19 COL9A1 (ENSRFEG00010009212) #20 FAM135A (ENSRFEG00010009732) #21 SDHAF4 (ENSRFEG00010010023) #22 SMAP1 (ENSRFEG00010010074) #23 B3GAT2 (ENSRFEG00010010262) #24 OGFRL1 (ENSRFEG00010010417) #28 RIMS1 (ENSRFEG00010010803) #29 KCNQ5 (ENSRFEG00010012334) #31 ENSRFEG00010014111 DPPA5 (ENSRFEG00010014186) #34 ENSRFEG00010014247 #35 OOEP (ENSRFEG00010014295) DDX43 (ENSRFEG00010014367) #36 CGAS (ENSRFEG00010014633) #37 MTO1 (ENSRFEG00010014806) ENSRFEG00010014869 SLC17A5 (ENSRFEG00010014929) CD109 (ENSRFEG00010015120) Megabat MODERN SPECIES 3476 COL19A1 (ENSPVAG00000016684) #19 COL9A1 (ENSPVAG00000016694) #20 FAM135A (ENSPVAG00000016700) #21 SDHAF4 (ENSPVAG00000016708) #22 SMAP1 (ENSPVAG00000016711) #23 B3GAT2 (ENSPVAG00000016712) #24 Equus ANCESTRAL SPECIES 10 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000163729 #10 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 Donkey MODERN SPECIES 28 RAB23 (ENSEASG00005003529) PRIM2 (ENSEASG00005003539) KHDRBS2 (ENSEASG00005003578) LGSN (ENSEASG00005003583) #7 ENSEASG00005003589 PTP4A1 (ENSEASG00005010910) #8 ENSEASG00005032631 #9 ENSEASG00005003591 #9 EYS (ENSEASG00005003602) #10 ENSEASG00005033340 ADGRB3 (ENSEASG00005003678) #13 LMBRD1 (ENSEASG00005003858) #18 COL19A1 (ENSEASG00005036370) #19 COL9A1 (ENSEASG00005037727) #20 FAM135A (ENSEASG00005003955) #21 SDHAF4 (ENSEASG00005004351) #22 SMAP1 (ENSEASG00005004362) #23 B3GAT2 (ENSEASG00005004368) #24 OGFRL1 (ENSEASG00005004388) #28 RIMS1 (ENSEASG00005004492) #29 ENSEASG00005004555 #31 ENSEASG00005038200 ENSEASG00005028415 ENSEASG00005029660 ENSEASG00005034404 ENSEASG00005012961 ENSEASG00005012229 ENSEASG00005030498 ENSEASG00005029269 ENSEASG00005009250 E2F3 (ENSEASG00005009240) Atlantogenata ANCESTRAL SPECIES 3 ENSGT00940000162903.f ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000164215 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000165345 ENSGT00940000155933.b.a #31 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.b.a ENSGT00940000160370 Xenarthra ANCESTRAL SPECIES 831 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 Armadillo MODERN SPECIES 4504 LMBRD1 (ENSDNOG00000007818) #18 ENSDNOG00000038899 COL19A1 (ENSDNOG00000015985) #19 COL9A1 (ENSDNOG00000015999) #20 FAM135A (ENSDNOG00000008711) #21 SDHAF4 (ENSDNOG00000011171) #22 SMAP1 (ENSDNOG00000004919) #23 ENSDNOG00000033399 B3GAT2 (ENSDNOG00000047443) #24 ENSDNOG00000040264 OGFRL1 (ENSDNOG00000011912) #28 Sloth MODERN SPECIES 8022 FAM135A (ENSCHOG00000011346) #21 SDHAF4 (ENSCHOG00000011410) #22 Afrotheria ANCESTRAL SPECIES 13 ENSGT00940000155008.C ENSGT00390000016954 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000165345 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601 #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C Afrotheria_a ANCESTRAL SPECIES 13 ENSGT00940000155008.C ENSGT00390000016954 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b.h #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000165345 ENSGT00940000154353.A #32 ENSGT00940000154353.B #34 ENSGT00940000162601.w #35 ENSGT00940000162097 ENSGT00940000163229 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C Elephant MODERN SPECIES 1 DST (ENSLAFG00000009708) BEND6 (ENSLAFG00000020660) ZNF451 (ENSLAFG00000007200) BAG2 (ENSLAFG00000007207) RAB23 (ENSLAFG00000007209) PRIM2 (ENSLAFG00000006311) KHDRBS2 (ENSLAFG00000006655) LGSN (ENSLAFG00000002710) #7 PTP4A1 (ENSLAFG00000006572) #8 PHF3 (ENSLAFG00000013686) #9 ADGRB3 (ENSLAFG00000011829) #13 LMBRD1 (ENSLAFG00000001495) #18 COL19A1 (ENSLAFG00000001988) #19 COL9A1 (ENSLAFG00000015016) #20 FAM135A (ENSLAFG00000015601) #21 SDHAF4 (ENSLAFG00000002689) #22 SMAP1 (ENSLAFG00000007948) #23 B3GAT2 (ENSLAFG00000026291) #24 OGFRL1 (ENSLAFG00000005248) #28 ENSLAFG00000007470 #29 ENSLAFG00000010814 ENSLAFG00000022891 #32 DPPA5 (ENSLAFG00000018513) #34 ENSLAFG00000012747 #35 OOEP (ENSLAFG00000012754) ENSLAFG00000012755 CGAS (ENSLAFG00000010167) #37 MTO1 (ENSLAFG00000007793) SLC17A5 (ENSLAFG00000008545) CD109 (ENSLAFG00000006753) COL12A1 (ENSLAFG00000010089) Hyrax MODERN SPECIES 3991 SDHAF4 (ENSPCAG00000007155) #22 Tenrec MODERN SPECIES 4711 SDHAF4 (ENSETEG00000011154) #22 Marsupialia ANCESTRAL SPECIES 2 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653.a ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00940000171801 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653.a ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00940000171801 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Diprotodontia ANCESTRAL SPECIES 37 ENSGT00390000016954 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653.a ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a Diprotodontia_a ANCESTRAL SPECIES 36 ENSGT00390000016954 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00960000187030 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653.a ENSGT01050000244827.E #37 ENSGT00970000198019 ENSGT00390000011297 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a Common wonbat DUPLICATION Common wonbat MODERN SPECIES 613 ENSVURG00010011320 KHDRBS2 (ENSVURG00010011335) LGSN (ENSVURG00010011349) #7 ENSVURG00010011367 ENSVURG00010011376 #8 PHF3 (ENSVURG00010011395) #9 ENSVURG00010011412 ENSVURG00010011420 ENSVURG00010011437 ENSVURG00010011447 ENSVURG00010011456 ENSVURG00010011471 #13 LMBRD1 (ENSVURG00010011489) #18 COL9A1 (ENSVURG00010011537) #20 FAM135A (ENSVURG00010011637) #21 ENSVURG00010011697 #22 SMAP1 (ENSVURG00010011708) #23 ENSVURG00010011717 B3GAT2 (ENSVURG00010011724) #24 OGFRL1 (ENSVURG00010011736) #28 ENSVURG00010011753 #29 ENSVURG00010011765 #29 ENSVURG00010011776 KCNQ5 (ENSVURG00010011836) #31 ENSVURG00010012984 #37 ENSVURG00010012990 MTO1 (ENSVURG00010012994) ENSVURG00010012999 SLC17A5 (ENSVURG00010013010) CD109 (ENSVURG00010013045) ENSVURG00010013078 Common wonbat MODERN SPECIES 1028 ENSVURG00010021225 DNAH5 (ENSVURG00010021185) TRIO (ENSVURG00010021149) OTULINL (ENSVURG00010021137) OTULIN (ENSVURG00010021135) ANKH (ENSVURG00010021123) ENSVURG00010021114 FBXL7 (ENSVURG00010021107) MARCHF11 (ENSVURG00010021104) ZNF622 (ENSVURG00010021097) RETREG1 (ENSVURG00010021092) MYO10 (ENSVURG00010021079) ENSVURG00010021069 ENSVURG00010021066 ENSVURG00010021063 ENSVURG00010021059 #22 CDH18 (ENSVURG00010021029) ENSVURG00010021025 ENSVURG00010021023 ENSVURG00010021019 ENSVURG00010021011 CDH12 (ENSVURG00010021006) ENSVURG00010020988 CDH10 (ENSVURG00010020949) ENSVURG00010020939 CDH9 (ENSVURG00010020927) ENSVURG00010020923 ENSVURG00010020918 ENSVURG00010020913 ENSVURG00010020907 CDH6 (ENSVURG00010020902) koala MODERN SPECIES 81 ENSPCIG00000023985 #13 LMBRD1 (ENSPCIG00000023984) #18 ENSPCIG00000030710 #19 COL9A1 (ENSPCIG00000034658) #20 FAM135A (ENSPCIG00000020680) #21 ENSPCIG00000030986 #22 ENSPCIG00000020679 #23 B3GAT2 (ENSPCIG00000006427) #24 OGFRL1 (ENSPCIG00000006430) #28 RIMS1 (ENSPCIG00000008784) #29 KCNQ5 (ENSPCIG00000017321) #31 ENSPCIG00000017981 ENSPCIG00000017982 #37 ENSPCIG00000017986 SLC17A5 (ENSPCIG00000017999) CD109 (ENSPCIG00000018000) ENSPCIG00000032522 ENSPCIG00000024782 COL12A1 (ENSPCIG00000019655) ENSPCIG00000007869 TMEM30A (ENSPCIG00000019650) Tasmanian devil MODERN SPECIES 3 ZNF451 (ENSSHAG00000003028) BAG2 (ENSSHAG00000024835) RAB23 (ENSSHAG00000006379) PRIM2 (ENSSHAG00000001863) ENSSHAG00000023090 KHDRBS2 (ENSSHAG00000013169) LGSN (ENSSHAG00000008367) #7 PTP4A1 (ENSSHAG00000024492) #8 PHF3 (ENSSHAG00000011449) #9 ENSSHAG00000029728 ADGRB3 (ENSSHAG00000011284) #13 LMBRD1 (ENSSHAG00000025420) #18 COL19A1 (ENSSHAG00000011749) #19 COL9A1 (ENSSHAG00000012247) #20 FAM135A (ENSSHAG00000013798) #21 SDHAF4 (ENSSHAG00000032284) #22 SMAP1 (ENSSHAG00000014724) #23 B3GAT2 (ENSSHAG00000021663) #24 OGFRL1 (ENSSHAG00000016382) #28 RIMS1 (ENSSHAG00000008965) #29 KCNQ5 (ENSSHAG00000014723) #31 ENSSHAG00000001847 ENSSHAG00000002951 #37 MTO1 (ENSSHAG00000003944) ENSSHAG00000023883 ENSSHAG00000004864 SLC17A5 (ENSSHAG00000029856) CD109 (ENSSHAG00000008788) COL12A1 (ENSSHAG00000005741) COX7A2 (ENSSHAG00000024282) TMEM30A (ENSSHAG00000024471) Opossum MODERN SPECIES 1 ENSMODG00000048236 ENSMODG00000018701 #8 PHF3 (ENSMODG00000018699) #9 ENSMODG00000018689 ENSMODG00000046810 ENSMODG00000051568 ENSMODG00000046221 ENSMODG00000036499 ENSMODG00000018608 #13 LMBRD1 (ENSMODG00000018586) #18 COL19A1 (ENSMODG00000018584) #19 COL9A1 (ENSMODG00000018579) #20 ENSMODG00000045475 ENSMODG00000018567 #21 ENSMODG00000042039 #21 SDHAF4 (ENSMODG00000018571) #22 SMAP1 (ENSMODG00000018563) #23 ENSMODG00000039035 B3GAT2 (ENSMODG00000018561) #24 OGFRL1 (ENSMODG00000018560) #28 RIMS1 (ENSMODG00000018557) #29 ENSMODG00000040024 KCNQ5 (ENSMODG00000018548) #31 ENSMODG00000018546 CGAS (ENSMODG00000018545) #37 ENSMODG00000048836 MTO1 (ENSMODG00000018543) ENSMODG00000018533 SLC17A5 (ENSMODG00000018522) CD109 (ENSMODG00000018520) ENSMODG00000045941 Platypus MODERN SPECIES ENSOANG00000044351 ZNF451 (ENSOANG00000013803) BAG2 (ENSOANG00000045205) RAB23 (ENSOANG00000036074) ENSOANG00000037097 KHDRBS2 (ENSOANG00000032105) LGSN (ENSOANG00000002192) #7 PTP4A1 (ENSOANG00000002193) #8 ENSOANG00000049401 PHF3 (ENSOANG00000009452) #9 ENSOANG00000036307 ENSOANG00000001622 #13 LMBRD1 (ENSOANG00000014934) #18 COL9A1 (ENSOANG00000014937) #20 FAM135A (ENSOANG00000014938) #21 SDHAF4 (ENSOANG00000014939) #22 SMAP1 (ENSOANG00000046085) #23 B3GAT2 (ENSOANG00000039356) #24 ENSOANG00000004715 #28 RIMS1 (ENSOANG00000001502) #29 KCNQ5 (ENSOANG00000003444) #31 ENSOANG00000006467 ENSOANG00000013441 #37 MTO1 (ENSOANG00000003443) ENSOANG00000043962 SLC17A5 (ENSOANG00000012352) RRM2 (ENSOANG00000005507) HPCAL1 (ENSOANG00000050538) ODC1 (ENSOANG00000002322) NOL10 (ENSOANG00000014497) ATP6V1C2 (ENSOANG00000014499) Sauria ANCESTRAL SPECIES 1 ENSGT00940000157134 ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000165329 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00940000171801 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 Archelosauria ANCESTRAL SPECIES 1 ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000164215 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000165329 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00940000171801 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C Cryptodira ANCESTRAL SPECIES 1 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134.a ENSGT00940000157134.b ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00940000171801 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C Testudinoidea ANCESTRAL SPECIES 12 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134.a ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C.c ENSGT00940000154923.C.d Emydidae ANCESTRAL SPECIES 8 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134.a ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.s #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C.c ENSGT00940000154923.C.d ENSGT00940000154550.a Three-toed box turtle MODERN SPECIES 15 ZNF451 (ENSTMTG00000022031) BAG2 (ENSTMTG00000022021) RAB23 (ENSTMTG00000022015) PRIM2 (ENSTMTG00000022005) KHDRBS2 (ENSTMTG00000021993) ENSTMTG00000021978 LGSN (ENSTMTG00000021972) #7 PTP4A1 (ENSTMTG00000021967) #8 PHF3 (ENSTMTG00000021961) #9 ENSTMTG00000021945 ENSTMTG00000021938 ADGRB3 (ENSTMTG00000021930) #13 LMBRD1 (ENSTMTG00000021925) #18 ENSTMTG00000021921 #20 FAM135A (ENSTMTG00000021916) #21 SDHAF4 (ENSTMTG00000021914) #22 SMAP1 (ENSTMTG00000021908) #23 B3GAT2 (ENSTMTG00000021901) #24 OGFRL1 (ENSTMTG00000021898) #28 ASRGL1 (ENSTMTG00000021888) RIMS1 (ENSTMTG00000018948) #29 KCNQ5 (ENSTMTG00000018423) #31 ENSTMTG00000018296 CGAS (ENSTMTG00000018012) #37 MTO1 (ENSTMTG00000017967) ENSTMTG00000017955 SLC17A5 (ENSTMTG00000017932) CD109 (ENSTMTG00000016013) ENSTMTG00000015858 ENSTMTG00000015398 COX7A2 (ENSTMTG00000015362) painted turtle MODERN SPECIES 12 ENSCPBG00000025220 ENSCPBG00000025217 ENSCPBG00000025214 ENSCPBG00000025204 ENSCPBG00000025189 ENSCPBG00000025182 ENSCPBG00000025181 ENSCPBG00000025179 ENSCPBG00000025175 ENSCPBG00000025163 ENSCPBG00000025153 ADGRB3 (ENSCPBG00000024170) #13 LMBRD1 (ENSCPBG00000024028) #18 ENSCPBG00000024016 #20 FAM135A (ENSCPBG00000023994) #21 SDHAF4 (ENSCPBG00000023987) #22 SMAP1 (ENSCPBG00000023984) #23 ENSCPBG00000023977 #24 B3GAT2 (ENSCPBG00000023976) #24 SLC17A5 (ENSCPBG00000023971) CD109 (ENSCPBG00000023961) COL12A1 (ENSCPBG00000023951) COX7A2 (ENSCPBG00000023949) TMEM30A (ENSCPBG00000023947) FILIP1 (ENSCPBG00000023945) SENP6 (ENSCPBG00000023929) MYO6 (ENSCPBG00000023190) IMPG1 (ENSCPBG00000023153) HTR1B (ENSCPBG00000023152) ENSCPBG00000023151 MEI4 (ENSCPBG00000023150) Testudinidae ANCESTRAL SPECIES 10 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134.a ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C.c ENSGT00940000154923.C.d Goode s thornscrub tortoise MODERN SPECIES 17 BAG2 (ENSGEVG00005002046) RAB23 (ENSGEVG00005002058) PRIM2 (ENSGEVG00005002076) KHDRBS2 (ENSGEVG00005002097) ENSGEVG00005002126 LGSN (ENSGEVG00005002150) #7 PTP4A1 (ENSGEVG00005002162) #8 PHF3 (ENSGEVG00005002173) #9 ENSGEVG00005002205 ENSGEVG00005002250 ENSGEVG00005002259 ADGRB3 (ENSGEVG00005002267) #13 LMBRD1 (ENSGEVG00005002295) #18 ENSGEVG00005002331 #20 FAM135A (ENSGEVG00005002357) #21 SDHAF4 (ENSGEVG00005002442) #22 SMAP1 (ENSGEVG00005002459) #23 B3GAT2 (ENSGEVG00005002476) #24 OGFRL1 (ENSGEVG00005002484) #28 ASRGL1 (ENSGEVG00005002495) RIMS1 (ENSGEVG00005003278) #29 ENSGEVG00005005237 ENSGEVG00005005252 KCNQ5 (ENSGEVG00005005299) #31 ENSGEVG00005005394 CGAS (ENSGEVG00005005412) #37 MTO1 (ENSGEVG00005005432) ENSGEVG00005005454 SLC17A5 (ENSGEVG00005005504) CD109 (ENSGEVG00005005778) ENSGEVG00005006602 Abingdon island giant tortoise MODERN SPECIES 168 FAM135A (ENSCABG00000015983) #21 SDHAF4 (ENSCABG00000015964) #22 SMAP1 (ENSCABG00000015951) #23 B3GAT2 (ENSCABG00000015946) #24 Chinese turtle MODERN SPECIES 1359 ENSPSIG00000002055 ENSPSIG00000002053 ENSPSIG00000002051 ADGRB3 (ENSPSIG00000002540) #13 LMBRD1 (ENSPSIG00000002474) #18 ENSPSIG00000002453 #19 ENSPSIG00000002342 #19 COL9A1 (ENSPSIG00000002267) #20 FAM135A (ENSPSIG00000002259) #21 SDHAF4 (ENSPSIG00000002258) #22 SMAP1 (ENSPSIG00000002256) #23 B3GAT2 (ENSPSIG00000002251) #24 OGFRL1 (ENSPSIG00000002244) #28 ASRGL1 (ENSPSIG00000002240) RIMS1 (ENSPSIG00000002227) #29 ENSPSIG00000002049 ENSPSIG00000002048 KCNQ5 (ENSPSIG00000002206) #31 ENSPSIG00000002202 Archosauria ANCESTRAL SPECIES 3 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Aves ANCESTRAL SPECIES 10 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Neognathae ANCESTRAL SPECIES 2 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Galloanserae ANCESTRAL SPECIES 2 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000165329 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Anatidae ANCESTRAL SPECIES ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000165329 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Duck MODERN SPECIES 21 RAB23 (ENSAPLG00000003715) PRIM2 (ENSAPLG00000003752) ENSAPLG00000024759 KHDRBS2 (ENSAPLG00000013452) LGSN (ENSAPLG00000006068) #7 PTP4A1 (ENSAPLG00000006095) #8 PHF3 (ENSAPLG00000006219) #9 ENSAPLG00000001044 ENSAPLG00000003000 ADGRB3 (ENSAPLG00000016368) #13 ENSAPLG00000017793 LMBRD1 (ENSAPLG00000016044) #18 ENSAPLG00000021718 #20 ENSAPLG00000020898 FAM135A (ENSAPLG00000012238) #21 SDHAF4 (ENSAPLG00000012169) #22 SMAP1 (ENSAPLG00000012058) #23 B3GAT2 (ENSAPLG00000017791) #24 OGFRL1 (ENSAPLG00000011967) #28 ASRGL1 (ENSAPLG00000011850) RIMS1 (ENSAPLG00000010534) #29 KCNQ5 (ENSAPLG00000010359) #31 ENSAPLG00000010182 CGAS (ENSAPLG00000010154) #37 MTO1 (ENSAPLG00000009903) EEF1A1 (ENSAPLG00000009349) SLC17A5 (ENSAPLG00000008535) CD109 (ENSAPLG00000007918) COL12A1 (ENSAPLG00000012959) COX7A2 (ENSAPLG00000013886) TMEM30A (ENSAPLG00000013903) Pink-footed goose MODERN SPECIES 70 ADGRB3 (ENSABRG00000003525) #13 LMBRD1 (ENSABRG00000003467) #18 COL19A1 (ENSABRG00000003083) #19 COL9A1 (ENSABRG00000002887) #20 FAM135A (ENSABRG00000002827) #21 SDHAF4 (ENSABRG00000002809) #22 SMAP1 (ENSABRG00000002790) #23 B3GAT2 (ENSABRG00000002763) #24 OGFRL1 (ENSABRG00000002745) #28 ASRGL1 (ENSABRG00000002689) RIMS1 (ENSABRG00000002469) #29 ENSABRG00000002399 KCNQ5 (ENSABRG00000000616) #31 ENSABRG00000000525 CGAS (ENSABRG00000000515) #37 MTO1 (ENSABRG00000000499) EEF1A1 (ENSABRG00000000491) SLC17A5 (ENSABRG00000000478) CD109 (ENSABRG00000000431) COL12A1 (ENSABRG00000016410) COX7A2 (ENSABRG00000016401) Phasianidae ANCESTRAL SPECIES 3 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000165329 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C.a ENSGT00910000148442 ENSGT00940000154923.C.b Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C.a ENSGT00940000154550.a ENSGT00390000004660.C.a.a ENSGT00950000182852.A.a.a Chicken MODERN SPECIES 22 ZNF451 (ENSGALG00010002347) BAG2 (ENSGALG00010002342) RAB23 (ENSGALG00010002340) PRIM2 (ENSGALG00010002336) KHDRBS2 (ENSGALG00010002330) LGSN (ENSGALG00010001502) #7 PTP4A1 (ENSGALG00010001496) #8 PHF3 (ENSGALG00010001491) #9 ENSGALG00010001483 ENSGALG00010001828 ADGRB3 (ENSGALG00010001818) #13 LMBRD1 (ENSGALG00010001776) #18 COL19A1 (ENSGALG00010001758) #19 COL9A1 (ENSGALG00010001727) #20 FAM135A (ENSGALG00010001696) #21 SDHAF4 (ENSGALG00010001677) #22 SMAP1 (ENSGALG00010001657) #23 B3GAT2 (ENSGALG00010001633) #24 OGFRL1 (ENSGALG00010002471) #28 ASRGL1 (ENSGALG00010002463) RIMS1 (ENSGALG00010002446) #29 KCNQ5 (ENSGALG00010002405) #31 ENSGALG00010001550 CGAS (ENSGALG00010001546) #37 MTO1 (ENSGALG00010001542) ENSGALG00010001532 EEF1A1 (ENSGALG00010001525) SLC17A5 (ENSGALG00010001518) CD109 (ENSGALG00010001508) COL12A1 (ENSGALG00010004096) COX7A2 (ENSGALG00010004076) Japanese quail MODERN SPECIES 21 ZNF451 (ENSCJPG00005007567) BAG2 (ENSCJPG00005007566) RAB23 (ENSCJPG00005007563) PRIM2 (ENSCJPG00005007456) KHDRBS2 (ENSCJPG00005007414) LGSN (ENSCJPG00005007371) #7 PTP4A1 (ENSCJPG00005007366) #8 PHF3 (ENSCJPG00005007351) #9 ENSCJPG00005007343 ENSCJPG00005007286 ADGRB3 (ENSCJPG00005007163) #13 LMBRD1 (ENSCJPG00005007147) #18 COL19A1 (ENSCJPG00005007116) #19 COL9A1 (ENSCJPG00005007115) #20 FAM135A (ENSCJPG00005007103) #21 SDHAF4 (ENSCJPG00005007101) #22 SMAP1 (ENSCJPG00005007097) #23 B3GAT2 (ENSCJPG00005007096) #24 OGFRL1 (ENSCJPG00005007070) #28 ASRGL1 (ENSCJPG00005007069) RIMS1 (ENSCJPG00005007064) #29 KCNQ5 (ENSCJPG00005007022) #31 ENSCJPG00005007018 CGAS (ENSCJPG00005007017) #37 MTO1 (ENSCJPG00005007016) EEF1A1 (ENSCJPG00005007015) SLC17A5 (ENSCJPG00005007013) CD109 (ENSCJPG00005007009) COL12A1 (ENSCJPG00005006996) COX7A2 (ENSCJPG00005006995) TMEM30A (ENSCJPG00005006994) Neognathae_b ANCESTRAL SPECIES 1 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Passeriformes ANCESTRAL SPECIES 2 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a Passeroidea ANCESTRAL SPECIES ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a Common canary MODERN SPECIES 1 BAG2 (ENSSCAG00000008803) RAB23 (ENSSCAG00000008800) PRIM2 (ENSSCAG00000008763) KHDRBS2 (ENSSCAG00000008710) LGSN (ENSSCAG00000008663) #7 PTP4A1 (ENSSCAG00000008658) #8 PHF3 (ENSSCAG00000008648) #9 ENSSCAG00000008642 ENSSCAG00000008615 ENSSCAG00000008599 ADGRB3 (ENSSCAG00000008350) #13 LMBRD1 (ENSSCAG00000008154) #18 ENSSCAG00000008102 ENSSCAG00000008087 #20 FAM135A (ENSSCAG00000008058) #21 SDHAF4 (ENSSCAG00000008052) #22 SMAP1 (ENSSCAG00000008048) #23 B3GAT2 (ENSSCAG00000008013) #24 OGFRL1 (ENSSCAG00000007993) #28 ASRGL1 (ENSSCAG00000007977) ENSSCAG00000007926 #29 ENSSCAG00000007769 #29 CD109 (ENSSCAG00000007729) SLC17A5 (ENSSCAG00000007700) ENSSCAG00000007696 EEF1A1 (ENSSCAG00000007693) MTO1 (ENSSCAG00000007689) CGAS (ENSSCAG00000007683) #37 ENSSCAG00000007663 KCNQ5 (ENSSCAG00000007615) #31 COL12A1 (ENSSCAG00000007543) Medium ground finch MODERN SPECIES 35 RRAGD (ENSGFOG00000005200) UBE2J1 (ENSGFOG00000005192) GABRR2 (ENSGFOG00000005179) PRIM2 (ENSGFOG00000005170) KHDRBS2 (ENSGFOG00000005164) ENSGFOG00000005150 LGSN (ENSGFOG00000005141) #7 PTP4A1 (ENSGFOG00000005130) #8 PHF3 (ENSGFOG00000005105) #9 ENSGFOG00000005093 ENSGFOG00000005080 ADGRB3 (ENSGFOG00000005049) #13 LMBRD1 (ENSGFOG00000004617) #18 ENSGFOG00000004576 FAM135A (ENSGFOG00000004480) #21 SDHAF4 (ENSGFOG00000004468) #22 SMAP1 (ENSGFOG00000004445) #23 B3GAT2 (ENSGFOG00000004432) #24 Great tit MODERN SPECIES 22 BAG2 (ENSPMJG00000008872) RAB23 (ENSPMJG00000008871) PRIM2 (ENSPMJG00000008867) KHDRBS2 (ENSPMJG00000008850) LGSN (ENSPMJG00000008817) #7 PTP4A1 (ENSPMJG00000008814) #8 ENSPMJG00000008812 PHF3 (ENSPMJG00000008805) #9 ENSPMJG00000008801 ENSPMJG00000008765 ENSPMJG00000008697 ADGRB3 (ENSPMJG00000008636) #13 LMBRD1 (ENSPMJG00000008596) #18 COL9A1 (ENSPMJG00000008590) #20 FAM135A (ENSPMJG00000008581) #21 SDHAF4 (ENSPMJG00000008580) #22 SMAP1 (ENSPMJG00000008578) #23 B3GAT2 (ENSPMJG00000008577) #24 OGFRL1 (ENSPMJG00000008571) #28 ASRGL1 (ENSPMJG00000008570) RIMS1 (ENSPMJG00000008547) #29 KCNQ5 (ENSPMJG00000008536) #31 ENSPMJG00000008495 CGAS (ENSPMJG00000008494) #37 MTO1 (ENSPMJG00000008492) EEF1A1 (ENSPMJG00000008454) SLC17A5 (ENSPMJG00000008453) CD109 (ENSPMJG00000008447) COL12A1 (ENSPMJG00000008162) TMEM30A (ENSPMJG00000008155) FILIP1 (ENSPMJG00000008145) Neognathae_c ANCESTRAL SPECIES 10 ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.d ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Kakapo MODERN SPECIES 23 ZNF451 (ENSSHBG00005002551) BAG2 (ENSSHBG00005002532) RAB23 (ENSSHBG00005002515) PRIM2 (ENSSHBG00005002499) KHDRBS2 (ENSSHBG00005002479) LGSN (ENSSHBG00005002461) #7 PTP4A1 (ENSSHBG00005002448) #8 PHF3 (ENSSHBG00005002395) #9 ENSSHBG00005002364 ENSSHBG00005002343 ENSSHBG00005002326 ADGRB3 (ENSSHBG00005002302) #13 LMBRD1 (ENSSHBG00005002082) #18 ENSSHBG00005001967 #20 FAM135A (ENSSHBG00005001902) #21 SDHAF4 (ENSSHBG00005001815) #22 SMAP1 (ENSSHBG00005001790) #23 B3GAT2 (ENSSHBG00005001768) #24 OGFRL1 (ENSSHBG00005001742) #28 ASRGL1 (ENSSHBG00005000361) RIMS1 (ENSSHBG00005000355) #29 KCNQ5 (ENSSHBG00005008797) #31 ENSSHBG00005008757 CGAS (ENSSHBG00005008750) #37 MTO1 (ENSSHBG00005008741) EEF1A1 (ENSSHBG00005008734) SLC17A5 (ENSSHBG00005008721) CD109 (ENSSHBG00005007760) COL12A1 (ENSSHBG00005004710) COX7A2 (ENSSHBG00005004450) TMEM30A (ENSSHBG00005004441) Golden eagle MODERN SPECIES 11 BAG2 (ENSACCG00020005286) RAB23 (ENSACCG00020005279) PRIM2 (ENSACCG00020007380) KHDRBS2 (ENSACCG00020007322) LGSN (ENSACCG00020007305) #7 PTP4A1 (ENSACCG00020007291) #8 ENSACCG00020007277 PHF3 (ENSACCG00020007254) #9 ENSACCG00020007243 ENSACCG00020007232 ADGRB3 (ENSACCG00020007156) #13 LMBRD1 (ENSACCG00020007097) #18 COL19A1 (ENSACCG00020007061) #19 ENSACCG00020007036 #20 FAM135A (ENSACCG00020007002) #21 SDHAF4 (ENSACCG00020006982) #22 SMAP1 (ENSACCG00020006957) #23 B3GAT2 (ENSACCG00020006936) #24 OGFRL1 (ENSACCG00020006923) #28 ASRGL1 (ENSACCG00020006889) ENSACCG00020006860 RIMS1 (ENSACCG00020006798) #29 ENSACCG00020006756 KCNQ5 (ENSACCG00020006696) #31 ENSACCG00020006599 CGAS (ENSACCG00020006584) #37 MTO1 (ENSACCG00020006568) EEF1A1 (ENSACCG00020006558) SLC17A5 (ENSACCG00020006535) CD109 (ENSACCG00020006357) COL12A1 (ENSACCG00020005240) African ostrich MODERN SPECIES 1078 ADGRB3 (ENSSCUG00000016112) #13 LMBRD1 (ENSSCUG00000016102) #18 COL19A1 (ENSSCUG00000016055) #19 COL9A1 (ENSSCUG00000016031) #20 FAM135A (ENSSCUG00000016012) #21 SDHAF4 (ENSSCUG00000016001) #22 SMAP1 (ENSSCUG00000015996) #23 OGFRL1 (ENSSCUG00000015985) #28 ASRGL1 (ENSSCUG00000015981) RIMS1 (ENSSCUG00000015953) #29 KCNQ5 (ENSSCUG00000015927) #31 ENSSCUG00000015925 CGAS (ENSSCUG00000015924) #37 MTO1 (ENSSCUG00000015917) EEF1A1 (ENSSCUG00000015913) SLC17A5 (ENSSCUG00000015903) CD109 (ENSSCUG00000015886) COL12A1 (ENSSCUG00000015725) COX7A2 (ENSSCUG00000015626) TMEM30A (ENSSCUG00000015623) FILIP1 (ENSSCUG00000015616) Lepidosauria ANCESTRAL SPECIES ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00910000148442 tuatara MODERN SPECIES 142 ENSSPUG00000015604 ADGRB3 (ENSSPUG00000015616) #13 LMBRD1 (ENSSPUG00000015646) #18 COL9A1 (ENSSPUG00000015669) #20 FAM135A (ENSSPUG00000015700) #21 SDHAF4 (ENSSPUG00000015724) #22 SMAP1 (ENSSPUG00000015732) #23 B3GAT2 (ENSSPUG00000015749) #24 ENSSPUG00000015773 ENSSPUG00000015794 RIMS1 (ENSSPUG00000016340) #29 ENSSPUG00000018045 ##31 KCNQ5 (ENSSPUG00000018069) #31 ENSSPUG00000018097 CGAS (ENSSPUG00000018128) #37 MTO1 (ENSSPUG00000018137) ENSSPUG00000018156 SLC17A5 (ENSSPUG00000018171) ENSSPUG00000018193 ENSSPUG00000018206 ENSSPUG00000018213 Episquamata ANCESTRAL SPECIES ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00910000148442 ENSGT00940000154923.C Toxicofera ANCESTRAL SPECIES ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00390000011297 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00910000148442 ENSGT00940000154923.C Elapidae ANCESTRAL SPECIES ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000164728 ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000170566 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00910000148442 ENSGT00940000154923.C ENSGT00940000154550.a Elapidae_a ANCESTRAL SPECIES 6 ENSGT00940000155008.C.bb.a.a ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00980000198621.d ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000170566 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a ENSGT00950000182852.A.a.a Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00940000155008.C.bb.a.a ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00980000198621.d ENSGT00940000163741 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00940000170566 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.c.a ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a ENSGT00390000004660.C.a.a ENSGT00950000182852.A.a.a Mainland tiger snake MODERN SPECIES 11 ENSNSUG00000006768 ZNF451 (ENSNSUG00000006750) BAG2 (ENSNSUG00000006742) RAB23 (ENSNSUG00000006739) PRIM2 (ENSNSUG00000006724) ENSNSUG00000006721 KHDRBS2 (ENSNSUG00000006713) LGSN (ENSNSUG00000006658) #7 PTP4A1 (ENSNSUG00000006657) #8 PHF3 (ENSNSUG00000006401) #9 ENSNSUG00000006397 ADGRB3 (ENSNSUG00000006396) #13 LMBRD1 (ENSNSUG00000006286) #18 ENSNSUG00000006284 #20 FAM135A (ENSNSUG00000006270) #21 SDHAF4 (ENSNSUG00000006269) #22 SMAP1 (ENSNSUG00000006170) #23 B3GAT2 (ENSNSUG00000006168) #24 OGFRL1 (ENSNSUG00000006144) #28 ENSNSUG00000006141 ASRGL1 (ENSNSUG00000006138) RIMS1 (ENSNSUG00000005454) #29 KCNQ5 (ENSNSUG00000005447) #31 ENSNSUG00000005425 ENSNSUG00000005422 SLC17A5 (ENSNSUG00000005418) CD109 (ENSNSUG00000005383) COL12A1 (ENSNSUG00000005375) COX7A2 (ENSNSUG00000005370) TMEM30A (ENSNSUG00000005365) FILIP1 (ENSNSUG00000005362) Eastern brown snake MODERN SPECIES 4 BAG2 (ENSPTXG00000008841) RAB23 (ENSPTXG00000008840) PRIM2 (ENSPTXG00000008838) ENSPTXG00000008837 KHDRBS2 (ENSPTXG00000008836) ENSPTXG00000008835 LGSN (ENSPTXG00000008834) #7 PTP4A1 (ENSPTXG00000008833) #8 PHF3 (ENSPTXG00000008824) #9 ENSPTXG00000008822 ENSPTXG00000008821 ADGRB3 (ENSPTXG00000008820) #13 LMBRD1 (ENSPTXG00000008818) #18 ENSPTXG00000008817 #20 FAM135A (ENSPTXG00000008816) #21 SDHAF4 (ENSPTXG00000008814) #22 SMAP1 (ENSPTXG00000008798) #23 B3GAT2 (ENSPTXG00000008796) #24 OGFRL1 (ENSPTXG00000008795) #28 ENSPTXG00000008793 ASRGL1 (ENSPTXG00000008790) ENSPTXG00000008787 #29 ENSPTXG00000008784 #29 KCNQ5 (ENSPTXG00000008779) #31 ENSPTXG00000008775 ENSPTXG00000008773 SLC17A5 (ENSPTXG00000008769) ENSPTXG00000008765 CD109 (ENSPTXG00000008492) COL12A1 (ENSPTXG00000005498) COX7A2 (ENSPTXG00000005469) Blue-lipped sea krait MODERN SPECIES 6760 SDHAF4 (ENSLLTG00000015341) #22 Indian cobra MODERN SPECIES BAG2 (ENSNNAG00000015881) RAB23 (ENSNNAG00000015866) PRIM2 (ENSNNAG00000015785) KHDRBS2 (ENSNNAG00000015754) LGSN (ENSNNAG00000015734) #7 PTP4A1 (ENSNNAG00000015723) #8 PHF3 (ENSNNAG00000015673) #9 ENSNNAG00000015658 ENSNNAG00000015638 ENSNNAG00000015610 ADGRB3 (ENSNNAG00000015584) #13 LMBRD1 (ENSNNAG00000015553) #18 ENSNNAG00000015539 #20 ENSNNAG00000015531 FAM135A (ENSNNAG00000015469) #21 SDHAF4 (ENSNNAG00000015456) #22 SMAP1 (ENSNNAG00000015423) #23 B3GAT2 (ENSNNAG00000015408) #24 OGFRL1 (ENSNNAG00000015393) #28 ENSNNAG00000015376 ASRGL1 (ENSNNAG00000015345) RIMS1 (ENSNNAG00000015102) #29 ENSNNAG00000015075 KCNQ5 (ENSNNAG00000014971) #31 ENSNNAG00000014788 ENSNNAG00000014749 SLC17A5 (ENSNNAG00000014667) CD109 (ENSNNAG00000014548) ENSNNAG00000014537 COL12A1 (ENSNNAG00000014417) COX7A2 (ENSNNAG00000014396) Lizard DUPLICATION Lizard MODERN SPECIES KHDRBS2 (ENSACAG00000006691) ENSACAG00000037006 ENSACAG00000035554 ENSACAG00000036121 ENSACAG00000040662 ADGRB3 (ENSACAG00000007902) #13 ENSACAG00000040112 ENSACAG00000042244 ENSACAG00000042614 ENSACAG00000035456 LMBRD1 (ENSACAG00000008167) #18 ENSACAG00000039744 COL9A1 (ENSACAG00000008314) #20 ENSACAG00000035972 FAM135A (ENSACAG00000008382) #21 ENSACAG00000038685 #22 ENSACAG00000042633 SMAP1 (ENSACAG00000008477) #23 ENSACAG00000038295 ENSACAG00000038117 #24 B3GAT2 (ENSACAG00000035756) #24 OGFRL1 (ENSACAG00000008532) #28 ENSACAG00000045107 ENSACAG00000008593 ENSACAG00000043519 ENSACAG00000036220 ENSACAG00000040235 ENSACAG00000038242 ENSACAG00000029054 ENSACAG00000043775 ENSACAG00000036269 Lizard MODERN SPECIES 4 FHDC1 (ENSACAG00000015978) ARFIP1 (ENSACAG00000015994) ENSACAG00000040191 FBXW7 (ENSACAG00000002680) ENSACAG00000040734 GATB (ENSACAG00000002772) FHIP1A (ENSACAG00000002879) SH3D19 (ENSACAG00000002951) ENSACAG00000002978 LRBA (ENSACAG00000003023) MAB21L2 (ENSACAG00000045445) ##37 DCLK2 (ENSACAG00000003495) ENSACAG00000035947 ENSACAG00000039095 ENSACAG00000029401 ENSACAG00000026786 #22 ENSACAG00000040684 ENSACAG00000044995 NR3C2 (ENSACAG00000003612) ENSACAG00000043946 ARHGAP10 (ENSACAG00000003717) ENSACAG00000039469 PRMT9 (ENSACAG00000003813) TMEM184C (ENSACAG00000003842) EDNRA (ENSACAG00000003899) TTC29 (ENSACAG00000003933) POU4F2 (ENSACAG00000003952) SLC10A7 (ENSACAG00000003959) REELD1 (ENSACAG00000045237) LSM6 (ENSACAG00000004004) ENSACAG00000044445 Laterata ANCESTRAL SPECIES 10 ENSGT00390000009155 #22 ENSGT00940000163607 ENSGT00940000160216 ENSGT00940000160737 ENSGT00940000159742 ENSGT00940000161603 ENSGT00940000161885 ENSGT00450000040324.a ENSGT00940000162064.c.a.a.b ENSGT00390000000410 ENSGT00950000185398 ENSGT00940000157026 ENSGT00940000158533 ENSGT00940000166800 ENSGT00940000160086 ENSGT00940000165573 Common wall lizard MODERN SPECIES 3 PTPN23 (ENSPMRG00000015818) ENSPMRG00000015920 MYO1G (ENSPMRG00000015935) ENSPMRG00000015987 ENSPMRG00000015989 TBRG4 (ENSPMRG00000015994) TRDMT1 (ENSPMRG00000016003) ZNF653 (ENSPMRG00000016013) ENSPMRG00000016018 ENSPMRG00000016023 CCDC13 (ENSPMRG00000016037) C5orf15 (ENSPMRG00000016073) SRI (ENSPMRG00000016078) ENSPMRG00000016086 ENSPMRG00000016089 ENSPMRG00000016095 #22 ENSPMRG00000016104 ENSPMRG00000016115 ENSPMRG00000016133 BPNT2 (ENSPMRG00000016138) ENSPMRG00000016145 ENSPMRG00000016154 ENSPMRG00000016160 ENSPMRG00000016163 ENSPMRG00000016170 ENSPMRG00000016177 ##30 ENSPMRG00000016188 ENSPMRG00000016193 ENSPMRG00000016199 ENSPMRG00000016204 ENSPMRG00000016208 Argentine black and white tegu MODERN SPECIES 5 PTPN23 (ENSSMRG00000017218) ENSSMRG00000017216 ENSSMRG00000017213 ENSSMRG00000017198 CCM2 (ENSSMRG00000017195) ENSSMRG00000017194 TBRG4 (ENSSMRG00000017193) ENSSMRG00000017190 GHITM (ENSSMRG00000017189) KCNA5 (ENSSMRG00000017181) SNRNP48 (ENSSMRG00000017177) ENSSMRG00000017140 BCDIN3D (ENSSMRG00000017138) ADIPOR1 (ENSSMRG00000017136) NDUFA4 (ENSSMRG00000017133) SDHAF4 (ENSSMRG00000017131) #22 ENSSMRG00000017128 GALNT4 (ENSSMRG00000017122) BPNT2 (ENSSMRG00000017119) CDC25A (ENSSMRG00000017116) ENSSMRG00000017084 ENSSMRG00000017067 ENSSMRG00000017064 ENSSMRG00000017063 ENSSMRG00000017062 ENSSMRG00000017059 ENSSMRG00000017058 ENSSMRG00000017053 ENSSMRG00000017037 ENSSMRG00000017026 ENSSMRG00000017023 Anura ANCESTRAL SPECIES 8 ENSGT00940000162855.a.a ENSGT00390000011354 ENSGT00390000017590 ENSGT00940000155064 ENSGT00390000009790 ENSGT00940000157134 ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406.b #8 ENSGT00940000155080 #9 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.a #31 ENSGT00940000159209.e ENSGT00940000165345 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00950000183029.B ENSGT00940000160370 ENSGT00940000155926 ENSGT00940000154923.C ENSGT00940000154550.a Frog MODERN SPECIES 5 rab23 (ENSXETG00000037818) prim2 (ENSXETG00000004450) ENSXETG00000041472 ENSXETG00000044834 khdrbs2 (ENSXETG00000004451) ENSXETG00000004452 LGSN (ENSXETG00000044196) #7 ptp4a1 (ENSXETG00000040023) #8 cdc6 (ENSXETG00000004455) #9 adgrb3 (ENSXETG00000011749) #13 lmbrd1 (ENSXETG00000011753) #18 col19a1 (ENSXETG00000037705) #19 col9a1 (ENSXETG00000017926) #20 ENSXETG00000045812 fam135a (ENSXETG00000017907) #21 sdhaf4 (ENSXETG00000017922) #22 ENSXETG00000042727 ENSXETG00000044146 smap1 (ENSXETG00000017900) #23 b3gat2 (ENSXETG00000017898) #24 ENSXETG00000046639 ogfrl1 (ENSXETG00000041769) #28 ENSXETG00000043266 ENSXETG00000048917 asrgl1 (ENSXETG00000002310) ENSXETG00000037571 rims1 (ENSXETG00000002308) #29 ENSXETG00000044711 kcnq5 (ENSXETG00000031377) #31 cgas (ENSXETG00000038502) #37 eef1a1 (ENSXETG00000001182) Leishan spiny toad MODERN SPECIES 7 LGSN (ENSLLEG00000016084) #7 ENSLLEG00000016223 ENSLLEG00000016269 ##8 PHF3 (ENSLLEG00000016438) #9 ENSLLEG00000016691 ADGRB3 (ENSLLEG00000016782) #13 LMBRD1 (ENSLLEG00000017211) #18 ENSLLEG00000017647 ENSLLEG00000017703 #20 ENSLLEG00000017785 ENSLLEG00000018180 ENSLLEG00000026695 ENSLLEG00000026842 ENSLLEG00000027226 #21 ENSLLEG00000027519 SDHAF4 (ENSLLEG00000027555) #22 SMAP1 (ENSLLEG00000027586) #23 B3GAT2 (ENSLLEG00000027636) #24 ENSLLEG00000027679 ENSLLEG00000027693 OGFRL1 (ENSLLEG00000027739) #28 ENSLLEG00000028041 ASRGL1 (ENSLLEG00000028063) ENSLLEG00000028120 ENSLLEG00000028129 RIMS1 (ENSLLEG00000028333) #29 ENSLLEG00000029583 ENSLLEG00000029567 ENSLLEG00000029599 ENSLLEG00000029628 #37 ENSLLEG00000029701 #37 Coelacanth MODERN SPECIES 686 ENSLACG00000015379 DISP1 (ENSLACG00000014502) SDHAF4 (ENSLACG00000012975) #22 SMAP1 (ENSLACG00000010218) #23 ENSLACG00000009548 OGFRL1 (ENSLACG00000004969) #28 Actinopterygii ANCESTRAL SPECIES 33 ENSGT00950000183045.A.a.b ENSGT00390000013639 #7 ENSGT00940000154406 #8 ENSGT00940000155080 #9 ENSGT00940000165329 ENSGT00940000160615.b.b.a ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000006243 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000171583 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00950000183029.B ENSGT00940000160370 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b ENSGT00940000153431.b Neopterygii ANCESTRAL SPECIES 3 ENSGT00390000013639 #7 ENSGT00940000154406 #8 ENSGT00940000155080 #9 ENSGT00940000165329 ENSGT00940000160615.b.b.a ENSGT00940000160615.a.b ENSGT00940000163741 ENSGT00940000162809 ENSGT00950000183136.b.a.a ENSGT00940000155081.D #13 ENSGT00390000002581 #18 ENSGT00940000158276 #19 ENSGT00940000157935 #20 ENSGT00940000157565 #21 ENSGT00390000006243 ENSGT00390000009155 #22 ENSGT00940000155884 #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134 #29 ENSGT00940000155933.b.b ##31 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00950000183029.B ENSGT00940000166291 ENSGT00940000154866.B ENSGT01030000234532.A.a.a.b ENSGT00940000153431.b ENSGT00390000006916.c Osteoglossocephalai ANCESTRAL SPECIES 92 ENSGT00390000001742.a ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00950000183109.c.a.a.a.b ENSGT00940000158515 ENSGT00390000014031 ENSGT00940000159518.b ENSGT00390000006243 ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164095.b ENSGT00940000164611 ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00950000183029.B.j ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683 ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a Osteoglossiformes ANCESTRAL SPECIES 115 ENSGT00940000154418.a.a.d ENSGT00940000163289.b.a.b ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000158698.l.a ENSGT00390000009155 #22 ENSGT00940000155884.a.b #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.a ##31 ENSGT00940000163653 ENSGT01050000244827.E.e.b #37 ENSGT00950000183029.B.i.a ENSGT00940000166291.g ENSGT00940000154866.B.a ENSGT00940000166683 ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a Asian bonytongue MODERN SPECIES 19 ENSSFOG00015013008 ENSSFOG00015012935 SLK (ENSSFOG00015012846) SFR1 (ENSSFOG00015028199) CFAP43 (ENSSFOG00015012763) ENSSFOG00015012731 itprip (ENSSFOG00015029908) ##37 CALHM3 (ENSSFOG00015012698) CALHM1 (ENSSFOG00015012690) calhm2.1 (ENSSFOG00015025842) nt5c2a (ENSSFOG00015012548) fbxw4 (ENSSFOG00015012488) fgf8a (ENSSFOG00015012408) slc2a15a (ENSSFOG00015012364) TLX1 (ENSSFOG00015026057) SDHAF4 (ENSSFOG00015030247) #22 b3gat2 (ENSSFOG00015028654) #24 OGFRL1 (ENSSFOG00015024337) #28 asrgl1 (ENSSFOG00015012313) ENSSFOG00015012291 #29 ENSSFOG00015003071 ##31 ddx43 (ENSSFOG00015012193) CGAS (ENSSFOG00015012161) #37 EEF1A1 (ENSSFOG00015012136) slc17a5 (ENSSFOG00015012119) ENSSFOG00015029442 ENSSFOG00015012058 ENSSFOG00015030330 ENSSFOG00015012043 vrk2 (ENSSFOG00015011998) fancl (ENSSFOG00015011964) Clupeocephala ANCESTRAL SPECIES 141 ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00950000183029.B.j ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.b ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b Otomorpha ANCESTRAL SPECIES 10 ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.i.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a ENSGT00940000158042 Clupeiformes ANCESTRAL SPECIES 95 ENSGT00940000162318 ENSGT00940000168119 ENSGT00940000155008.C ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000154615.i.a.b.i.b ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT01050000244827.E #37 ENSGT00950000183029.B.j.g.b ENSGT00950000183029.B.j.h ENSGT00940000166291 Denticle herring MODERN SPECIES 18 ENSDCDG00000009466 ENSDCDG00000009450 pcgf6 (ENSDCDG00000007916) inaa (ENSDCDG00000007517) MFAP4 (ENSDCDG00000007459) nt5c2a (ENSDCDG00000005828) cnnm2a (ENSDCDG00000005649) borcs7 (ENSDCDG00000005644) cyp17a1 (ENSDCDG00000004968) wbp1la (ENSDCDG00000004933) fbxw4 (ENSDCDG00000004918) fgf8a (ENSDCDG00000004914) slc2a15a (ENSDCDG00000004629) lbx1b (ENSDCDG00000004608) tlx1 (ENSDCDG00000004607) ENSDCDG00000004604 #22 ENSDCDG00000004601 ENSDCDG00000004599 RIMS1 (ENSDCDG00000004537) #29 asrgl1 (ENSDCDG00000004521) ENSDCDG00000004467 #28 OGFRL1 (ENSDCDG00000004374) #28 asrgl1 (ENSDCDG00000004365) RIMS1 (ENSDCDG00000003449) #29 KCNQ5 (ENSDCDG00000003148) #31 ddx43 (ENSDCDG00000002965) CGAS (ENSDCDG00000002934) #37 EEF1A1 (ENSDCDG00000033494) slc17a5 (ENSDCDG00000033470) p4ha1b (ENSDCDG00000033225) ENSDCDG00000033211 Atlantic herring MODERN SPECIES 4 ENSCHAG00000017852 DST (ENSCHAG00000018616) pcgf6 (ENSCHAG00000027714) inaa (ENSCHAG00000027715) nt5c2a (ENSCHAG00000027716) MFAP4 (ENSCHAG00000027720) cnnm2a (ENSCHAG00000027722) borcs7 (ENSCHAG00000027723) cyp17a1 (ENSCHAG00000027725) wbp1la (ENSCHAG00000027726) fbxw4 (ENSCHAG00000027727) fgf8a (ENSCHAG00000027731) slc2a15a (ENSCHAG00000027732) ENSCHAG00000027733 tlx1 (ENSCHAG00000027734) SDHAF4 (ENSCHAG00000027735) #22 smap1 (ENSCHAG00000027736) #23 b3gat2 (ENSCHAG00000027738) #24 OGFRL1 (ENSCHAG00000027739) #28 asrgl1 (ENSCHAG00000027741) RIMS1 (ENSCHAG00000027742) #29 KCNQ5 (ENSCHAG00000027745) #31 ddx43 (ENSCHAG00000027750) CGAS (ENSCHAG00000027752) #37 CGAS (ENSCHAG00000027756) #37 EEF1A1 (ENSCHAG00000027762) slc17a5 (ENSCHAG00000027772) FAM98A (ENSCHAG00000027781) rasgrp3 (ENSCHAG00000027785) LTBP1 (ENSCHAG00000027822) ttc27 (ENSCHAG00000027846) Otophysi ANCESTRAL SPECIES 26 ENSGT00940000165188 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b.d.a ENSGT00950000183100.B ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.i.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a ENSGT00940000158042 Characiphysae ANCESTRAL SPECIES 13 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b.d.a ENSGT00950000183100.B ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.i.a.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a ENSGT00940000158042 Characiphysae_b ANCESTRAL SPECIES 10 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b.d.a ENSGT00950000183100.B ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.i.a.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a ENSGT00940000158042 Characoidei ANCESTRAL SPECIES 5 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b.d.a ENSGT00950000183100.B ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.i.a.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000157361.a ENSGT00940000158042 Red-bellied piranha MODERN SPECIES 10 ENSPNAG00000000955 ldb1a (ENSPNAG00000000981) polr1c (ENSPNAG00000008443) pcgf6 (ENSPNAG00000001021) inaa (ENSPNAG00000008457) nt5c2a (ENSPNAG00000001046) cnnm2a (ENSPNAG00000001058) borcs7 (ENSPNAG00000008503) cyp17a1 (ENSPNAG00000007027) wbp1la (ENSPNAG00000001064) fbxw4 (ENSPNAG00000001068) fgf8a (ENSPNAG00000008557) slc2a15a (ENSPNAG00000008571) ENSPNAG00000001103 tlx1 (ENSPNAG00000006029) SDHAF4 (ENSPNAG00000001114) #22 smap1 (ENSPNAG00000008623) #23 b3gat2 (ENSPNAG00000001132) #24 OGFRL1 (ENSPNAG00000008651) #28 asrgl1 (ENSPNAG00000008660) RIMS1 (ENSPNAG00000001214) #29 KCNQ5 (ENSPNAG00000008878) #31 ddx43 (ENSPNAG00000001232) EEF1A1 (ENSPNAG00000008912) CGAS (ENSPNAG00000009093) #37 slc17a5 (ENSPNAG00000009132) RIN2 (ENSPNAG00000009141) ENSPNAG00000009148 SLC24A3 (ENSPNAG00000009179) soul2 (ENSPNAG00000001305) ccdc85a (ENSPNAG00000009206) Mexicana tetra MODERN SPECIES 17 ENSAMXG00000012078 ldb1a (ENSAMXG00000038752) polr1c (ENSAMXG00000012062) pcgf6 (ENSAMXG00000012056) inaa (ENSAMXG00000012052) nt5c2a (ENSAMXG00000039026) cnnm2a (ENSAMXG00000012039) borcs7 (ENSAMXG00000012036) cyp17a1 (ENSAMXG00000012029) wbp1la (ENSAMXG00000033725) fbxw4 (ENSAMXG00000033937) fgf8 (ENSAMXG00000034070) slc2a15a (ENSAMXG00000012007) ENSAMXG00000033957 tlx1 (ENSAMXG00000011990) SDHAF4 (ENSAMXG00000035767) #22 smap1 (ENSAMXG00000043334) #23 b3gat2 (ENSAMXG00000039282) #24 OGFRL1 (ENSAMXG00000031531) #28 asrgl1 (ENSAMXG00000037416) RIMS1 (ENSAMXG00000011907) #29 KCNQ5 (ENSAMXG00000004427) #31 ddx43 (ENSAMXG00000004457) CGAS (ENSAMXG00000036028) #37 EEF1A1 (ENSAMXG00000004487) slc17a5 (ENSAMXG00000004496) RIN2 (ENSAMXG00000004501) SLC24A3 (ENSAMXG00000039529) soul2 (ENSAMXG00000038941) ccdc85a (ENSAMXG00000038903) vrk2 (ENSAMXG00000004559) Channel catfish MODERN SPECIES 22 ENSIPUG00000024469 prom1a (ENSIPUG00000024468) ldb1 (ENSIPUG00000024466) polr1c (ENSIPUG00000024464) pcgf6 (ENSIPUG00000024462) NT5C2 (ENSIPUG00000024453) cnnm2 (ENSIPUG00000024452) borcs7 (ENSIPUG00000024448) cyp17 (ENSIPUG00000024439) wbp1l (ENSIPUG00000024436) fbxw4 (ENSIPUG00000024432) fgf8a (ENSIPUG00000024347) slc2a15a (ENSIPUG00000024343) ENSIPUG00000024340 TLX1 (ENSIPUG00000024339) sdhaf4 (ENSIPUG00000024338) #22 smap1 (ENSIPUG00000024326) #23 B3GAT2 (ENSIPUG00000024274) #24 OGFRL1 (ENSIPUG00000024273) #28 asrgl1 (ENSIPUG00000024269) rims1 (ENSIPUG00000024250) #29 kcnq5 (ENSIPUG00000024247) #31 ddx43 (ENSIPUG00000023423) CGAS (ENSIPUG00000023419) #37 EEF1A1 (ENSIPUG00000023399) SLC17A5 (ENSIPUG00000023388) rin2 (ENSIPUG00000023376) slc24a3 (ENSIPUG00000023365) soul2 (ENSIPUG00000023353) ccdc85a (ENSIPUG00000023342) vrk2 (ENSIPUG00000023328) Cyprinoidei ANCESTRAL SPECIES 11 ENSGT00390000001546 ENSGT00530000063586.a ENSGT00390000005639.a.b.d.a ENSGT00950000183100.B ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00940000155884.a #23 ENSGT00940000159583 #24 ENSGT00390000018730.B #28 ENSGT00950000183045.A.a.a ENSGT00940000155134.y #29 ENSGT00940000155933.b.a #31 ENSGT00940000163653 ENSGT00950000183029.B.i.b ENSGT00940000166291 ENSGT00940000154866.B.a ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000160412.b ENSGT00940000158042 ENSGT00390000005537 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 159 ENSGT00530000063586.a.f ENSGT00390000005639.a.b.d.a.a ENSGT00950000183100.B.a.b ENSGT00940000158034.p ENSGT00940000154418.a.a.a.b ENSGT00940000163289.b.a.b.d ENSGT00940000159034.kb.b ENSGT00390000015849.j ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a.a ENSGT00390000005029.e ENSGT00940000159518.a.a ENSGT00940000164095.a.b ENSGT00940000164611.b.k.b ENSGT00940000158698.i ENSGT00390000009155.a #22 ENSGT00940000155884.a.f #23 ENSGT00940000159583.m #24 ENSGT00390000018730.B.c.a #28 ENSGT00950000183045.A.a.a.o ENSGT00940000155134.y.d #29 ENSGT00940000155933.b.a.d #31 ENSGT00940000163653 ENSGT01050000244827.E.g.a #37 ENSGT00950000183029.B.i.b.b ENSGT00940000166291.b ENSGT00940000154866.B.a.d ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a.a ENSGT00940000160412.b.b ENSGT00940000157361.a.m.a Goldfish MODERN SPECIES 31 ENSCARG00000067104 ENSCARG00000067119 polr1c (ENSCARG00000067130) pcgf6 (ENSCARG00000067189) inaa (ENSCARG00000067223) nt5c2a (ENSCARG00000067337) cnnm2a (ENSCARG00000067978) borcs7 (ENSCARG00000067993) cyp17a1 (ENSCARG00000068007) wbp1la (ENSCARG00000068059) fbxw4 (ENSCARG00000068064) fgf8a (ENSCARG00000068086) slc2a15a (ENSCARG00000068105) ENSCARG00000068184 tlx1 (ENSCARG00000068195) SDHAF4 (ENSCARG00000068213) #22 smap1 (ENSCARG00000068232) #23 b3gat2 (ENSCARG00000068307) #24 OGFRL1 (ENSCARG00000068324) #28 asrgl1 (ENSCARG00000068335) sfrp5 (ENSCARG00000068349) GOLGA7B (ENSCARG00000068356) CRTAC1 (ENSCARG00000068383) ENSCARG00000068689 LOXL4 (ENSCARG00000068696) zgc:123010 (ENSCARG00000068708) pyroxd2 (ENSCARG00000068734) slc25a28 (ENSCARG00000068831) nkx3.3 (ENSCARG00000068839) nkx2.3 (ENSCARG00000068846) got1 (ENSCARG00000068854) Cyprininae_a ANCESTRAL SPECIES 101 ENSGT00530000063586.a.f ENSGT00390000005639.a.b.d.a.a ENSGT00950000183100.B.a.a ENSGT00940000158034.p ENSGT00940000154418.a.a.a.b ENSGT00940000163289.b.a.b.d ENSGT00940000159034.kb.b ENSGT00390000015849.i.b ENSGT00940000155588.b.a ENSGT00950000183109.c.a.a.a.a.a ENSGT00390000005029.e ENSGT00940000159518.a.a ENSGT00940000164095.a.b ENSGT00940000164611.b.k.b ENSGT00940000158698.i ENSGT00390000009155.a #22 ENSGT00940000155884.a.f #23 ENSGT00940000159583.m #24 ENSGT00390000018730.B.c.a #28 ENSGT00950000183045.A.a.a.o ENSGT00940000155134.y.d #29 ENSGT00940000155933.b.a.d #31 ENSGT00940000163653 ENSGT01050000244827.E.g.a #37 ENSGT00950000183029.B.i.b.b ENSGT00940000166291.b ENSGT00940000154866.B.a.d ENSGT00940000166683.a.a ENSGT01030000234532.A.a.a.b.j.a.a ENSGT00940000160412.b.b ENSGT00940000157361.a.m.a Golden-line barbel MODERN SPECIES 105 ENSSGRG00000042842 ldb1a (ENSSGRG00000042844) polr1c (ENSSGRG00000042884) pcgf6 (ENSSGRG00000042910) inaa (ENSSGRG00000042911) nt5c2a (ENSSGRG00000042916) cnnm2a (ENSSGRG00000042979) borcs7 (ENSSGRG00000042980) cyp17a1 (ENSSGRG00000042981) wbp1la (ENSSGRG00000043124) fbxw4 (ENSSGRG00000043135) fgf8a (ENSSGRG00000043139) slc2a15a (ENSSGRG00000043143) ENSSGRG00000043147 tlx1 (ENSSGRG00000043148) SDHAF4 (ENSSGRG00000043149) #22 smap1 (ENSSGRG00000043150) #23 b3gat2 (ENSSGRG00000043153) #24 OGFRL1 (ENSSGRG00000043154) #28 asrgl1 (ENSSGRG00000043220) RIMS1 (ENSSGRG00000043226) #29 KCNQ5 (ENSSGRG00000043237) #31 ddx43 (ENSSGRG00000043244) CGAS (ENSSGRG00000043256) #37 slc17a5 (ENSSGRG00000043383) RIN2 (ENSSGRG00000044958) ENSSGRG00000044960 ENSSGRG00000044961 soul2 (ENSSGRG00000044962) ccdc85a (ENSSGRG00000044963) Common carp reference MODERN SPECIES 48 ENSCCRG00000008310 ldb1a (ENSCCRG00000077621) polr1c (ENSCCRG00000035743) pcgf6 (ENSCCRG00000035757) inaa (ENSCCRG00000010014) nt5c2a (ENSCCRG00000008908) cnnm2a (ENSCCRG00000008778) borcs7 (ENSCCRG00000072536) cyp17a1 (ENSCCRG00000010022) wbp1la (ENSCCRG00000078206) fbxw4 (ENSCCRG00000010031) fgf8a (ENSCCRG00000010033) slc2a15a (ENSCCRG00000015324) ENSCCRG00000069064 tlx1 (ENSCCRG00000073948) SDHAF4 (ENSCCRG00000064793) #22 smap1 (ENSCCRG00000081017) #23 b3gat2 (ENSCCRG00000058439) #24 OGFRL1 (ENSCCRG00000067169) #28 asrgl1 (ENSCCRG00000070456) RIMS1 (ENSCCRG00000002003) #29 KCNQ5 (ENSCCRG00000027387) #31 ddx43 (ENSCCRG00000076256) CGAS (ENSCCRG00000076509) #37 eef1a1a (ENSCCRG00000072785) slc17a5 (ENSCCRG00000073356) ENSCCRG00000081717 ENSCCRG00000080640 soul2 (ENSCCRG00000037093) ENSCCRG00000065246 ENSCCRG00000081103 Cyprininae ANCESTRAL SPECIES 384 ENSGT00390000001546.c ENSGT00530000063586.a.e ENSGT00390000005639.a.b.d.a.b ENSGT00950000183100.B.b ENSGT00940000158034.o ENSGT00940000154418.a.a.a.a ENSGT00940000163289.b.a.b.c ENSGT00940000159034.kb.a ENSGT00390000015849.i.a.b ENSGT00950000183109.c.a.a.a.a.b ENSGT00390000005029.f ENSGT00940000159518.a.b ENSGT00940000164095.a.a ENSGT00940000164611.b.k.a ENSGT00940000158698.j ENSGT00390000009155.b #22 ENSGT00940000155884.a.e #23 ENSGT00940000159583.n #24 ENSGT00390000018730.B.c.b #28 ENSGT00950000183045.A.a.a.p ENSGT00940000155134.y.c #29 ENSGT00940000155933.b.a.c #31 Goldfish DUPLICATION Goldfish MODERN SPECIES 323 tlx1 (ENSCARG00000026794) ENSCARG00000026788 #22 smap1 (ENSCARG00000026712) #23 Goldfish MODERN SPECIES 4 ENSCARG00000008552 ENSCARG00000008560 ldb1a (ENSCARG00000008642) POLR1C (ENSCARG00000009582) pcgf6 (ENSCARG00000009593) inaa (ENSCARG00000009609) nt5c2a (ENSCARG00000009652) cnnm2a (ENSCARG00000010165) borcs7 (ENSCARG00000010191) wbp1la (ENSCARG00000010199) fbxw4 (ENSCARG00000010202) fgf8a (ENSCARG00000010217) slc2a15a (ENSCARG00000010237) ENSCARG00000010255 tlx1 (ENSCARG00000010261) SDHAF4 (ENSCARG00000010273) #22 smap1 (ENSCARG00000010288) #23 b3gat2 (ENSCARG00000010362) #24 OGFRL1 (ENSCARG00000010381) #28 asrgl1 (ENSCARG00000010412) RIMS1 (ENSCARG00000002394) #29 ENSCARG00000004182 #31 scdb (ENSCARG00000004189) #33 wnt8b (ENSCARG00000004209) hif1an (ENSCARG00000004263) dnajb12a (ENSCARG00000004610) ENSCARG00000004637 scdb (ENSCARG00000004646) #33 ENSCARG00000004679 #31 ENSCARG00000005148 bcl11aa (ENSCARG00000005154) Cyprininae_a ANCESTRAL SPECIES 107 ENSGT00390000005639.a.b.d.a.b ENSGT00950000183100.B.b ENSGT00940000158034.o ENSGT00940000154418.a.a.a.a ENSGT00940000163289.b.a.b.c ENSGT00940000159034.kb.a ENSGT00390000015849.i.a.b ENSGT00390000015849.j ENSGT00940000155588.b.b ENSGT00950000183109.c.a.a.a.a.b ENSGT00390000005029.f ENSGT00940000159518.a.b ENSGT00940000164095.a.a ENSGT00940000164611.b.k.a ENSGT00940000158698.j ENSGT00390000009155.b #22 ENSGT00940000155884.a.e #23 ENSGT00940000159583.n #24 ENSGT00390000018730.B.c.b #28 ENSGT00950000183045.A.a.a.p ENSGT00940000155134.y.c #29 ENSGT00940000155933.b.a.c #31 ENSGT01050000244827.E.g.b #37 ENSGT00950000183029.B.j.h ENSGT00940000166291.a ENSGT00940000154866.B.a.c ENSGT01030000234532.A.a.a.b.j.a.b ENSGT00940000160412.b.a ENSGT00940000157361.a.m.b ENSGT00940000160560.a.b.a.c.a.a ENSGT00940000158042.h Common carp reference MODERN SPECIES 18 ENSCCRG00000081966 ldb1a (ENSCCRG00000008367) polr1c (ENSCCRG00000078507) pcgf6 (ENSCCRG00000008611) inaa (ENSCCRG00000008627) nt5c2a (ENSCCRG00000069262) cnnm2a (ENSCCRG00000067197) borcs7 (ENSCCRG00000080250) wbp1la (ENSCCRG00000008830) fbxw4 (ENSCCRG00000081048) fgf8a (ENSCCRG00000058573) slc2a15a (ENSCCRG00000034481) ENSCCRG00000077372 ENSCCRG00000078379 tlx1 (ENSCCRG00000062204) SDHAF4 (ENSCCRG00000062363) #22 smap1 (ENSCCRG00000077009) #23 b3gat2 (ENSCCRG00000037475) #24 OGFRL1 (ENSCCRG00000020959) #28 ENSCCRG00000013245 asrgl1 (ENSCCRG00000076614) RIMS1 (ENSCCRG00000052961) #29 KCNQ5 (ENSCCRG00000012224) #31 ddx43 (ENSCCRG00000007601) ENSCCRG00000050069 CGAS (ENSCCRG00000075489) #37 ENSCCRG00000032642 slc17a5 (ENSCCRG00000071094) ENSCCRG00000054411 ENSCCRG00000072606 ENSCCRG00000080928 Golden-line barbel MODERN SPECIES 68 ENSSGRG00000027253 ldb1a (ENSSGRG00000027260) POLR1C (ENSSGRG00000027316) pcgf6 (ENSSGRG00000027324) inaa (ENSSGRG00000027325) nt5c2a (ENSSGRG00000027341) cnnm2a (ENSSGRG00000028351) borcs7 (ENSSGRG00000028368) cyp17a1 (ENSSGRG00000028369) wbp1la (ENSSGRG00000028372) fbxw4 (ENSSGRG00000028373) fgf8a (ENSSGRG00000028374) slc2a15a (ENSSGRG00000028377) ENSSGRG00000028407 tlx1 (ENSSGRG00000028408) SDHAF4 (ENSSGRG00000028409) #22 smap1 (ENSSGRG00000028411) #23 b3gat2 (ENSSGRG00000028412) #24 OGFRL1 (ENSSGRG00000028414) #28 asrgl1 (ENSSGRG00000028425) RIMS1 (ENSSGRG00000028430) #29 KCNQ5 (ENSSGRG00000028438) #31 CGAS (ENSSGRG00000028453) #37 eef1a1a (ENSSGRG00000028572) slc17a5 (ENSSGRG00000030360) RIN2 (ENSSGRG00000030524) SLC24A3 (ENSSGRG00000030529) soul2 (ENSSGRG00000030668) ccdc85a (ENSSGRG00000030669) ENSSGRG00000030672 vrk2 (ENSSGRG00000030675) Zebrafish MODERN SPECIES 4 ldb1a (ENSDARG00000010137) ENSDARG00000095011 polr1c (ENSDARG00000039400) pcgf6 (ENSDARG00000069681) inaa (ENSDARG00000011862) nt5c2a (ENSDARG00000039399) cnnm2a (ENSDARG00000061195) borcs7 (ENSDARG00000055070) cyp17a1 (ENSDARG00000033566) wbp1la (ENSDARG00000013245) fbxw4 (ENSDARG00000033551) fgf8a (ENSDARG00000003399) slc2a15a (ENSDARG00000029894) lbx1a (ENSDARG00000018321) tlx1 (ENSDARG00000003965) sdhaf4 (ENSDARG00000039390) #22 smap1 (ENSDARG00000031302) #23 b3gat2 (ENSDARG00000030733) #24 ogfrl1 (ENSDARG00000061223) #28 asrgl1 (ENSDARG00000021681) RIMS1 (ENSDARG00000074680) #29 KCNQ5 (ENSDARG00000069954) #31 ddx43 (ENSDARG00000022614) CGAS (ENSDARG00000021572) #37 eef1a1a (ENSDARG00000039502) slc17a5 (ENSDARG00000055190) RIN2 (ENSDARG00000074589) SLC24A3 (ENSDARG00000006760) soul2 (ENSDARG00000039499) ccdc85a (ENSDARG00000039497) vrk2 (ENSDARG00000021547) Euteleosteomorpha ANCESTRAL SPECIES 89 ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A Protacanthopterygii ANCESTRAL SPECIES 88 ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155571.A ENSGT00950000183054.b.d ENSGT00950000183027.a.b.c.a ENSGT01100000263502.B.a.a.d.a.a ENSGT00940000154877.B.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 82 ENSGT00940000154518.b.d ENSGT00940000156925.v.l ENSGT00940000156925.v.k.a ENSGT00940000158120.i ENSGT01000000215701 ENSGT00940000154865 ENSGT00940000167270.e ENSGT01030000234610.b.a.b.b ENSGT00740000115593.d ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c #22 ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000154877.B.a.a ENSGT00940000156225.z ENSGT01030000234633.C.a.b ENSGT00950000183175.A.d.a.b.b ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g ENSGT00660000095541.a.a.l ENSGT01000000220547 Salmoninae_a ANCESTRAL SPECIES 16 ENSGT00950000182805.a.b ENSGT00940000154551.b.l.a ENSGT00940000154518.b.d ENSGT00940000156925.v.k.a ENSGT00940000158120.i ENSGT00940000154865.vb.a ENSGT00940000167270.e ENSGT01030000234610.b.a.b.b.c ENSGT00740000115593.d ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c #22 ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000154877.B.a.a ENSGT00940000156225.z ENSGT01030000234633.C.a.b ENSGT00950000183175.A.d.a.b.b ENSGT00390000000854.c.b.e.b ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g ENSGT00660000095541.a.a.l Salmo ANCESTRAL SPECIES 23 ENSGT00950000182805.a.b ENSGT00940000154551.b.l.a ENSGT00940000154518.b.d ENSGT00940000156925.v.k.a ENSGT00940000158120.i ENSGT00940000154865.vb.a ENSGT00940000167270.e ENSGT01030000234610.b.a.b.b.c ENSGT00740000115593.d ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c #22 ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000154877.B.a.a ENSGT00940000156225.z ENSGT01030000234633.C.a.b ENSGT00950000183175.A.d.a.b.b ENSGT00390000000854.c.b.e.b ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g ENSGT00660000095541.a.a.l Atlantic salmon MODERN SPECIES ENSSSAG00000001970 eno4 (ENSSSAG00000001960) hspa12a (ENSSSAG00000075965) ENSSSAG00000001804 macroh2a2 (ENSSSAG00000069088) ENSSSAG00000000766 ENSSSAG00000069079 ENSSSAG00000069017 ENSSSAG00000068387 ENSSSAG00000068371 ENSSSAG00000108556 fbxw4 (ENSSSAG00000068356) fgf8a (ENSSSAG00000068350) ENSSSAG00000094428 tlx1 (ENSSSAG00000068344) ENSSSAG00000109421 #22 ENSSSAG00000068334 RAB1A (ENSSSAG00000090451) ENSSSAG00000068314 ENSSSAG00000112156 myoz1a (ENSSSAG00000068303) ENSSSAG00000103442 usp54a (ENSSSAG00000067930) opn4a (ENSSSAG00000067894) ldb3a (ENSSSAG00000067860) bmpr1aa (ENSSSAG00000066270) mmrn2a (ENSSSAG00000066228) SNCG (ENSSSAG00000066209) glud1a (ENSSSAG00000066078) nfkb2 (ENSSSAG00000065078) ENSSSAG00000062853 River trout MODERN SPECIES 9 ENSSTUG00000034039 eno4 (ENSSTUG00000034029) hspa12a (ENSSTUG00000033806) pitx3 (ENSSTUG00000033791) GBF1 (ENSSTUG00000033240) macroh2a2 (ENSSTUG00000033196) ENSSTUG00000033111 CALHM3 (ENSSTUG00000033080) hells (ENSSTUG00000032377) ENSSTUG00000032338 pcgf6 (ENSSTUG00000032319) fbxw4 (ENSSTUG00000032200) fgf8a (ENSSTUG00000032164) ENSSTUG00000032153 tlx1 (ENSSTUG00000032131) ENSSTUG00000032122 #22 cep68 (ENSSTUG00000032111) ENSSTUG00000031891 zgc:153169 (ENSSTUG00000031867) SYNPO2L (ENSSTUG00000031861) myoz1a (ENSSTUG00000031839) opn4a (ENSSTUG00000031800) ldb3a (ENSSTUG00000031482) bmpr1aa (ENSSTUG00000030770) mmrn2a (ENSSTUG00000030752) SNCG (ENSSTUG00000030733) glud1a (ENSSTUG00000030436) nfkb2 (ENSSTUG00000030346) ENSSTUG00000028784 elovl6l (ENSSTUG00000028713) ninl (ENSSTUG00000028594) Oncorhynchus ANCESTRAL SPECIES 17 ENSGT00950000182805.a.b ENSGT00940000154551.b.l.a ENSGT00940000154518.b.d ENSGT00940000156925.v.k.a ENSGT00940000158120.i ENSGT00940000154865.vb.a ENSGT00940000167270.e ENSGT01030000234610.b.a.b.b.c ENSGT00740000115593.d ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c #22 ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183045.C.mb.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000154877.B.a.a ENSGT00940000156225.z ENSGT01030000234633.C.a.b ENSGT00950000183175.A.d.a.b.b ENSGT00390000000854.c.b.e.b ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g Oncorhynchus_a ANCESTRAL SPECIES 13 ENSGT00940000155068.a.b.d ENSGT00950000182805.a.b ENSGT00940000154551.b.l.a ENSGT00940000154518.b.d ENSGT00940000156925.v.k.a ENSGT00940000158120.i ENSGT00940000167270.e ENSGT01030000234610.b.a.b.b.c ENSGT00740000115593.d ENSGT00940000166025.b.a ENSGT00940000158034.r ENSGT00390000005029.h ENSGT00940000159518.a.c ENSGT00940000164611.a.b.b ENSGT00940000158698.b.b ENSGT00390000009155.c #22 ENSGT00810000125473.A.d ENSGT00940000155078.a.b.a.b.g.b ENSGT00950000183045.C.mb.b ENSGT00950000183054.b.d.i ENSGT00950000183027.a.b.c.a.a ENSGT00940000155571.A.g.b ENSGT01100000263502.B.a.a.d.a.a.d ENSGT00940000154877.B.a.a ENSGT00940000156225.z ENSGT01030000234633.C.a.b ENSGT00950000183175.A.d.a.b.b ENSGT00390000000854.c.b.e.b ENSGT00940000164992.k ENSGT00940000155061.a.b.k.a.m ENSGT01050000244965.a.b.g Coho salmon MODERN SPECIES 2 pitx3 (ENSOKIG00005047372) GBF1 (ENSOKIG00005047404) macroh2a2 (ENSOKIG00005047591) ENSOKIG00005047612 ENSOKIG00005047628 ENSOKIG00005047665 CALHM3 (ENSOKIG00005047689) hells (ENSOKIG00005047721) ENSOKIG00005047965 ENSOKIG00005047981 fbxw4 (ENSOKIG00005047999) fgf8a (ENSOKIG00005048027) ENSOKIG00005048035 ENSOKIG00005048037 tlx1 (ENSOKIG00005048040) ENSOKIG00005048043 #22 ENSOKIG00005048047 zgc:153169 (ENSOKIG00005048056) SYNPO2L (ENSOKIG00005048087) myoz1a (ENSOKIG00005048094) opn4a (ENSOKIG00005048102) ldb3a (ENSOKIG00005048125) bmpr1aa (ENSOKIG00005048228) mmrn2a (ENSOKIG00005048348) SNCG (ENSOKIG00005048349) glud1a (ENSOKIG00005048374) nfkb2 (ENSOKIG00005048514) ENSOKIG00005048658 ENSOKIG00005049102 elovl6l (ENSOKIG00005049104) ENSOKIG00005049111 Chinook salmon MODERN SPECIES vax1 (ENSOTSG00005013057) atp6v1ba (ENSOTSG00005010104) eno4 (ENSOTSG00005010082) hspa12a (ENSOTSG00005010059) pitx3 (ENSOTSG00005010053) GBF1 (ENSOTSG00005010041) macroh2a2 (ENSOTSG00005010028) ENSOTSG00005009960 hells (ENSOTSG00005008668) ENSOTSG00005008658 pcgf6 (ENSOTSG00005008656) fbxw4 (ENSOTSG00005008650) fgf8a (ENSOTSG00005008649) ENSOTSG00005008648 tlx1 (ENSOTSG00005008647) ENSOTSG00005008646 #22 cep68 (ENSOTSG00005008645) ENSOTSG00005008641 zgc:153169 (ENSOTSG00005008639) SYNPO2L (ENSOTSG00005008637) myoz1a (ENSOTSG00005008636) usp54a (ENSOTSG00005008635) opn4a (ENSOTSG00005008620) ldb3a (ENSOTSG00005008616) bmpr1aa (ENSOTSG00005006028) mmrn2a (ENSOTSG00005006005) sncgb (ENSOTSG00005006003) glud1a (ENSOTSG00005005296) PSD (ENSOTSG00005001611) elovl6l (ENSOTSG00005001594) ninl (ENSOTSG00005001552) Rainbow trout MODERN SPECIES 15 hspa12a (ENSOMYG00000026525) pitx3 (ENSOMYG00000042905) ENSOMYG00000059612 ENSOMYG00000042851 macroh2a2 (ENSOMYG00000042807) ENSOMYG00000077179 ENSOMYG00000042781 ENSOMYG00000042758 ENSOMYG00000042443 ENSOMYG00000042401 ENSOMYG00000042394 fbxw4 (ENSOMYG00000042367) fgf8a (ENSOMYG00000042351) ENSOMYG00000042342 tlx1 (ENSOMYG00000042338) ENSOMYG00000042337 #22 ENSOMYG00000042335 ENSOMYG00000042216 ENSOMYG00000042180 ENSOMYG00000042176 ENSOMYG00000069512 myoz1a (ENSOMYG00000042165) usp54a (ENSOMYG00000042157) opn4a (ENSOMYG00000042134) ENSOMYG00000059037 ldb3a (ENSOMYG00000042037) bmpr1aa (ENSOMYG00000041006) mmrn2a (ENSOMYG00000040901) SNCG (ENSOMYG00000040891) ENSOMYG00000040602 ENSOMYG00000039983 Huchen MODERN SPECIES 122 ENSHHUG00000033244 macroh2a2 (ENSHHUG00000033523) ENSHHUG00000033537 ENSHHUG00000033542 ENSHHUG00000033576 CALHM3 (ENSHHUG00000033600) hells (ENSHHUG00000033611) ENSHHUG00000033727 pcgf6 (ENSHHUG00000033799) ENSHHUG00000033802 ENSHHUG00000033805 fgf8a (ENSHHUG00000033818) ENSHHUG00000033846 tlx1 (ENSHHUG00000033847) ENSHHUG00000033850 #22 cep68 (ENSHHUG00000033851) ENSHHUG00000033859 zgc:153169 (ENSHHUG00000034231) SYNPO2L (ENSHHUG00000034243) myoz1a (ENSHHUG00000034248) ENSHHUG00000034253 ENSHHUG00000034254 ENSHHUG00000034256 opn4a (ENSHHUG00000034263) ldb3a (ENSHHUG00000034284) bmpr1aa (ENSHHUG00000034314) mmrn2a (ENSHHUG00000034393) ENSHHUG00000034399 ENSHHUG00000034404 ENSHHUG00000034429 Salmoninae ANCESTRAL SPECIES 243 ENSGT00940000167270.f ENSGT00740000115593.c ENSGT01030000234610.b.a.a ENSGT00940000166025.b.b ENSGT00940000158034.q ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d #22 ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b Huchen MODERN SPECIES 245 ENSHHUG00000048503 hells (ENSHHUG00000048559) calhm2.1 (ENSHHUG00000048720) ENSHHUG00000048723 pcgf6 (ENSHHUG00000048735) inaa (ENSHHUG00000048740) nt5c2a (ENSHHUG00000048746) borcs7 (ENSHHUG00000048776) cyp17a1 (ENSHHUG00000048782) ENSHHUG00000048835 fbxw4 (ENSHHUG00000048838) fgf8a (ENSHHUG00000048858) slc2a15a (ENSHHUG00000048880) ENSHHUG00000048893 tlx1 (ENSHHUG00000048896) ENSHHUG00000048904 #22 cep68 (ENSHHUG00000048907) ENSHHUG00000048912 SYNPO2L (ENSHHUG00000049075) myoz1a (ENSHHUG00000049085) Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00940000167270.f ENSGT00740000115593.c ENSGT01030000234610.b.a.b.b.d ENSGT01030000234610.b.a.a ENSGT00940000166025.b.b ENSGT00940000158034.q ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d #22 ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b ENSGT00940000155571.A.g.a ENSGT00940000163377.a.b.b.b ENSGT01100000263502.B.a.a.d.a.a.c ENSGT00940000154877.C.kb ENSGT00940000154877.B.a.b ENSGT00940000156225.y ENSGT01030000234633.C.a.a ENSGT00950000183175.A.d.a.b.a ENSGT00390000000854.c.b.e.a ENSGT00390000003133 ENSGT00940000164992.l Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000167270.f ENSGT00740000115593.c ENSGT01030000234610.b.a.b.b.d ENSGT01030000234610.b.a.a ENSGT00940000166025.b.b ENSGT00940000158034.q ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d #22 ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b ENSGT00940000155571.A.g.a ENSGT00940000163377.a.b.b.b ENSGT01100000263502.B.a.a.d.a.a.c ENSGT00940000154877.B.a.b ENSGT00940000156225.y ENSGT01030000234633.C.a.a ENSGT00950000183175.A.d.a.b.a ENSGT00390000000854.c.b.e.a ENSGT00940000164992.l ENSGT00940000155061.a.b.k.a.n ENSGT00390000004582 Rainbow trout MODERN SPECIES ENSOMYG00000006563 hells (ENSOMYG00000005852) ENSOMYG00000005308 ENSOMYG00000005291 ENSOMYG00000005272 pcgf6 (ENSOMYG00000005228) inaa (ENSOMYG00000005199) nt5c2a (ENSOMYG00000004691) borcs7 (ENSOMYG00000004037) cyp17a1 (ENSOMYG00000004006) fbxw4 (ENSOMYG00000003974) fgf8a (ENSOMYG00000060026) slc2a15a (ENSOMYG00000003788) ENSOMYG00000003660 tlx1 (ENSOMYG00000003624) ENSOMYG00000003606 #22 ENSOMYG00000003583 ENSOMYG00000003446 ENSOMYG00000003305 myoz1a (ENSOMYG00000003276) ENSOMYG00000051133 usp54a (ENSOMYG00000003214) opn4a (ENSOMYG00000003022) ldb3a (ENSOMYG00000002905) bmpr1aa (ENSOMYG00000002792) mmrn2a (ENSOMYG00000002687) SNCG (ENSOMYG00000002650) glud1 (ENSOMYG00000002516) nfkb2 (ENSOMYG00000002188) ENSOMYG00000001816 ENSOMYG00000068417 Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000167270.f ENSGT00740000115593.c ENSGT01030000234610.b.a.b.b.d ENSGT01030000234610.b.a.a ENSGT00940000166025.b.b ENSGT00940000158034.q ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d #22 ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b ENSGT00940000155571.A.g.a ENSGT00940000163377.a.b.b.b ENSGT01100000263502.B.a.a.d.a.a.c ENSGT00940000154877.B.a.b ENSGT00940000156225.y ENSGT01030000234633.C.a.a ENSGT00950000183175.A.d.a.b.a ENSGT00390000000854.c.b.e.a ENSGT00940000164992.l ENSGT00940000155061.a.b.k.a.n ENSGT00390000004582 Coho salmon MODERN SPECIES 24 ENSOKIG00005009572 hells (ENSOKIG00005009326) ENSOKIG00005009251 calhm2.1 (ENSOKIG00005009238) ENSOKIG00005009221 pcgf6 (ENSOKIG00005009188) inaa (ENSOKIG00005009179) nt5c2a (ENSOKIG00005008775) borcs7 (ENSOKIG00005008726) cyp17a1 (ENSOKIG00005008708) fbxw4 (ENSOKIG00005008688) fgf8a (ENSOKIG00005008657) slc2a15a (ENSOKIG00005007891) ENSOKIG00005007829 tlx1 (ENSOKIG00005007814) ENSOKIG00005007807 #22 cep68 (ENSOKIG00005007798) ENSOKIG00005007623 SYNPO2L (ENSOKIG00005007597) myoz1a (ENSOKIG00005007586) usp54a (ENSOKIG00005007541) ENSOKIG00005007463 opn4a (ENSOKIG00005007429) ldb3a (ENSOKIG00005007339) bmpr1aa (ENSOKIG00005007168) mmrn2a (ENSOKIG00005007137) SNCG (ENSOKIG00005007088) glud1a (ENSOKIG00005007006) nfkb2 (ENSOKIG00005006743) ENSOKIG00005005951 AIFM2 (ENSOKIG00005005856) Chinook salmon MODERN SPECIES 30 ENSOTSG00005036262 hells (ENSOTSG00005036242) calhm2.1 (ENSOTSG00005036217) ENSOTSG00005036214 ENSOTSG00005036213 pcgf6 (ENSOTSG00005036212) inaa (ENSOTSG00005036210) nt5c2a (ENSOTSG00005035759) borcs7 (ENSOTSG00005035757) cyp17a1 (ENSOTSG00005035756) fbxw4 (ENSOTSG00005035754) fgf8a (ENSOTSG00005035753) slc2a15a (ENSOTSG00005035584) ENSOTSG00005035582 tlx1 (ENSOTSG00005035580) ENSOTSG00005035578 #22 cep68 (ENSOTSG00005035576) ENSOTSG00005035345 SYNPO2L (ENSOTSG00005035343) myoz1a (ENSOTSG00005035341) usp54a (ENSOTSG00005035271) ENSOTSG00005035203 opn4a (ENSOTSG00005035201) ldb3a (ENSOTSG00005035085) bmpr1aa (ENSOTSG00005034641) mmrn2a (ENSOTSG00005034639) SNCG (ENSOTSG00005034638) glud1a (ENSOTSG00005034596) nfkb2 (ENSOTSG00005034235) ENSOTSG00005032517 AIFM2 (ENSOTSG00005032504) Salmo ANCESTRAL SPECIES 29 ENSGT00940000167270.f ENSGT00740000115593.c ENSGT01030000234610.b.a.b.b.d ENSGT01030000234610.b.a.a ENSGT00940000166025.b.b ENSGT00940000158034.q ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00390000005029.g ENSGT00940000159518.a.d ENSGT00940000164095.a ENSGT00940000164611.a.b.a ENSGT00940000158698.b.a ENSGT00390000009155.d #22 ENSGT00810000125473.A.c ENSGT00940000155078.a.b.a.b.g.a.b ENSGT00950000183054.b.d.j ENSGT00950000183027.a.b.c.a.b ENSGT00940000155571.A.g.a ENSGT00940000163377.a.b.b.b ENSGT01100000263502.B.a.a.d.a.a.c ENSGT00940000154877.C.kb ENSGT00940000154877.B.a.b ENSGT00940000156225.y ENSGT01030000234633.C.a.a ENSGT00950000183175.A.d.a.b.a ENSGT00390000000854.c.b.e.a ENSGT00390000003133 ENSGT00940000164992.l River trout MODERN SPECIES 35 ENSSTUG00000005002 hells (ENSSTUG00000005197) CALHM3 (ENSSTUG00000006872) calhm2.1 (ENSSTUG00000006901) ENSSTUG00000006905 pcgf6 (ENSSTUG00000006916) inaa (ENSSTUG00000006947) nt5c2a (ENSSTUG00000006989) borcs7 (ENSSTUG00000007494) cyp17a1 (ENSSTUG00000007509) fbxw4 (ENSSTUG00000007530) fgf8a (ENSSTUG00000007553) slc2a15a (ENSSTUG00000007570) ENSSTUG00000007746 tlx1 (ENSSTUG00000007752) ENSSTUG00000007767 #22 cep68 (ENSSTUG00000007773) ENSSTUG00000007786 ENSSTUG00000007860 SYNPO2L (ENSSTUG00000007875) myoz1a (ENSSTUG00000007881) usp54a (ENSSTUG00000007892) opn4a (ENSSTUG00000007915) ENSSTUG00000008072 ldb3a (ENSSTUG00000008096) bmpr1aa (ENSSTUG00000008113) mmrn2a (ENSSTUG00000008241) SNCG (ENSSTUG00000008244) glud1a (ENSSTUG00000008266) shld2 (ENSSTUG00000008515) ENSSTUG00000008521 Atlantic salmon MODERN SPECIES 9 ENSSSAG00000074170 ENSSSAG00000074124 ENSSSAG00000085939 ENSSSAG00000072792 ENSSSAG00000072757 ENSSSAG00000101552 pcgf6 (ENSSSAG00000072746) inaa (ENSSSAG00000072742) nt5c2a (ENSSSAG00000069977) borcs7 (ENSSSAG00000119087) cyp17a1 (ENSSSAG00000069890) fbxw4 (ENSSSAG00000069868) fgf8a (ENSSSAG00000098674) slc2a15a (ENSSSAG00000069641) ENSSSAG00000069628 ENSSSAG00000069622 #22 ENSSSAG00000069615 ENSSSAG00000069562 ENSSSAG00000069556 ENSSSAG00000069555 myoz1a (ENSSSAG00000069550) usp54a (ENSSSAG00000069536) ENSSSAG00000069529 opn4a (ENSSSAG00000069504) ldb3a (ENSSSAG00000069409) bmpr1aa (ENSSSAG00000069050) mmrn2 (ENSSSAG00000069040) SNCG (ENSSSAG00000111421) glud1 (ENSSSAG00000068962) nfkb2 (ENSSSAG00000068892) ENSSSAG00000067538 Northern pike MODERN SPECIES 5 CALHM3 (ENSELUG00000014947) calhm2.1 (ENSELUG00000014966) ENSELUG00000014991 pcgf6 (ENSELUG00000015010) inaa (ENSELUG00000015029) nt5c2a (ENSELUG00000015147) borcs7 (ENSELUG00000015228) ENSELUG00000001250 ENSELUG00000015261 cyp17a1 (ENSELUG00000014836) fbxw4 (ENSELUG00000015291) fgf8a (ENSELUG00000015308) slc2a15a (ENSELUG00000000563) ENSELUG00000015360 tlx1 (ENSELUG00000015373) ENSELUG00000024705 #22 cep68 (ENSELUG00000015396) ENSELUG00000015413 zgc:153169 (ENSELUG00000015448) SYNPO2L (ENSELUG00000015472) myoz1a (ENSELUG00000015478) usp54a (ENSELUG00000015585) socs5b (ENSELUG00000015618) ENSELUG00000027306 mcfd2 (ENSELUG00000015627) TTC7A (ENSELUG00000015680) si:ch211-93n23.7 (ENSELUG00000015705) calm2a (ENSELUG00000015760) ENSELUG00000000596 ENSELUG00000015812 epcam (ENSELUG00000015828) Acanthomorphata ANCESTRAL SPECIES 96 ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b Cod MODERN SPECIES 6 minpp1a (ENSGMOG00000011756) papss2a (ENSGMOG00000011763) ptena (ENSGMOG00000032805) ENSGMOG00000034043 ENSGMOG00000025368 ##37 nt5c2a (ENSGMOG00000016201) ENSGMOG00000011257 borcs7 (ENSGMOG00000011250) cyp17a1 (ENSGMOG00000011243) ENSGMOG00000004318 fbxw4 (ENSGMOG00000015043) fgf8a (ENSGMOG00000015070) slc2a15a (ENSGMOG00000016589) ENSGMOG00000016612 tlx1 (ENSGMOG00000014671) ENSGMOG00000027921 #22 cep68 (ENSGMOG00000032092) ENSGMOG00000004888 zgc:153169 (ENSGMOG00000036949) ENSGMOG00000036040 EDRF1 (ENSGMOG00000004831) DHX32 (ENSGMOG00000029453) ENSGMOG00000037183 ENSGMOG00000019873 ADAM12 (ENSGMOG00000002539) ENSGMOG00000033058 ENSGMOG00000009032 INSYN2A (ENSGMOG00000032885) ENSGMOG00000016693 GnRH3 (ENSGMOG00000016680) ENSGMOG00000016672 Euacanthomorphacea ANCESTRAL SPECIES 51 ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000166025.b ENSGT00940000158034 ENSGT00940000154418.a.a.a ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b Pinecone sodierfish MODERN SPECIES 6 cdc5l (ENSMMDG00005006968) napba (ENSMMDG00005006966) ENSMMDG00005024636 ENSMMDG00005024635 crls1 (ENSMMDG00005024634) MCM8 (ENSMMDG00005024587) nt5c2a (ENSMMDG00005024586) borcs7 (ENSMMDG00005024585) cyp17a1 (ENSMMDG00005024584) wbp1la (ENSMMDG00005024583) fbxw4 (ENSMMDG00005024581) fgf8a (ENSMMDG00005024579) slc2a15a (ENSMMDG00005024578) ENSMMDG00005024576 tlx1 (ENSMMDG00005024575) ENSMMDG00005024574 #22 cep68 (ENSMMDG00005024573) pcgf5a (ENSMMDG00005024571) ENSMMDG00005024569 ENSMMDG00005024566 ENSMMDG00005024565 inaa (ENSMMDG00005024563) pcgf6 (ENSMMDG00005024561) ENSMMDG00005024559 calhm2.1 (ENSMMDG00005024558) CALHM3 (ENSMMDG00005024557) hells (ENSMMDG00005024554) ENSMMDG00005024553 ENSMMDG00005024552 ENSMMDG00005024551 ENSMMDG00005024550 Percomorphaceae ANCESTRAL SPECIES 57 ENSGT00940000156999 ENSGT00390000007683 ENSGT00390000014293.b ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b Tiger tail seahorse MODERN SPECIES 42 tlx1 (ENSHCOG00000001150) ENSHCOG00000001147 #22 ENSHCOG00000001144 rab1ab (ENSHCOG00000001137) calhm2.1 (ENSHCOG00000001131) CALHM3 (ENSHCOG00000001129) hells (ENSHCOG00000001119) ncapd3 (ENSHCOG00000001088) ENSHCOG00000001043 Percomorphaceae_B ANCESTRAL SPECIES 24 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154511.a ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b ENSGT00940000164978.b.c ENSGT00940000158042 ENSGT00390000005537 Ovalentaria ANCESTRAL SPECIES 18 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154511.a ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000167270 ENSGT00940000154865 ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00390000014293.b ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000167270 ENSGT00940000154865 ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00990000204611 ENSGT00940000164978.b.c ENSGT00940000158042 ENSGT00390000005537 Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00390000014293.b ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000167270 ENSGT00940000154865 ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00990000204611 ENSGT00940000164978.b.c ENSGT00940000158042 ENSGT00390000005537 Aplocheiloidei ANCESTRAL SPECIES 75 ENSGT00950000182909.b.b.b ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000167270 ENSGT00940000154865 ENSGT00940000158120 ENSGT00940000156925.v ENSGT00940000154518.b ENSGT00940000155139 ENSGT00940000154551.b.i ENSGT00950000182805.a.b Mangrove rivulus MODERN SPECIES 60 sertad2b (ENSKMAG00000017866) pcgf6 (ENSKMAG00000017851) ENSKMAG00000017824 ENSKMAG00000017812 ENSKMAG00000017797 RNF166 (ENSKMAG00000017768) cyp17a1 (ENSKMAG00000017730) borcs7 (ENSKMAG00000017712) nt5c2a (ENSKMAG00000017632) wbp1la (ENSKMAG00000017540) fbxw4 (ENSKMAG00000017521) fgf8a (ENSKMAG00000017503) slc2a15a (ENSKMAG00000017465) ENSKMAG00000017448 tlx1 (ENSKMAG00000017438) ENSKMAG00000017422 #22 ENSKMAG00000017386 rab1ab (ENSKMAG00000017357) hells (ENSKMAG00000017279) CALHM3 (ENSKMAG00000017261) calhm2.1 (ENSKMAG00000017248) ncapd3 (ENSKMAG00000017218) ENSKMAG00000017194 ENSKMAG00000017167 ENSKMAG00000017115 ENSKMAG00000016977 macroh2a2 (ENSKMAG00000016927) GBF1 (ENSKMAG00000016781) pitx3 (ENSKMAG00000016734) PNLIPRP2 (ENSKMAG00000016665) hspa12a (ENSKMAG00000016576) Turquoise killifish MODERN SPECIES 1612 kcnk18 (ENSNFUG00015001909) ENSNFUG00015001888 pitx3 (ENSNFUG00015001868) GBF1 (ENSNFUG00015001830) macroh2a2 (ENSNFUG00015001818) ENSNFUG00015001812 ENSNFUG00015001809 ENSNFUG00015001783 ENSNFUG00015001749 WBP1LA (ENSNFUG00015001688) FBXW4 (ENSNFUG00015001665) FGF8A (ENSNFUG00015001647) slc2a15a (ENSNFUG00015001603) ENSNFUG00015001570 tlx1 (ENSNFUG00015001561) ENSNFUG00015001556 #22 ENSNFUG00015001550 rab1ab (ENSNFUG00015001545) HELLS (ENSNFUG00015001451) CALHM3 (ENSNFUG00015001415) NT5C2A (ENSNFUG00015001389) ENSNFUG00015001372 cyp17a1 (ENSNFUG00015001215) RIN2 (ENSNFUG00015001140) zgc:175280 (ENSNFUG00015001044) ENSNFUG00015001026 CDC42EP3 (ENSNFUG00015001023) ENSNFUG00015001015 cyp1b1 (ENSNFUG00015001007) NANP (ENSNFUG00015001004) polr1b (ENSNFUG00015000987) Cyprinodontoidei ANCESTRAL SPECIES 55 ENSGT00940000155068.a.b ENSGT00510000048167.a ENSGT00950000182805.a.b ENSGT00940000154551.b.i ENSGT00940000154518.b ENSGT00940000156925.v ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000157361.b Poeciliinae ANCESTRAL SPECIES 16 ENSGT00940000155068.a.b ENSGT00510000048167.a ENSGT00950000182805.a.b ENSGT00940000154551.b.i ENSGT00940000154518.b ENSGT00940000156925.v ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029.i ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000157361.b ENSGT00390000017697.b ENSGT00940000160228.i.a.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 ENSGT00390000016551 Poecilia ANCESTRAL SPECIES 11 ENSGT00940000155068.a.b ENSGT00510000048167.a ENSGT00950000182805.a.b ENSGT00940000154551.b.i ENSGT00940000154518.b ENSGT00940000156925.v ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029.i ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000157361.b ENSGT00390000017697.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.a.a.a ENSGT00940000160228.i.a.a ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234 NAME_6 ANCESTRAL SPECIES 159 ENSGT00940000155068.a.b ENSGT00510000048167.a ENSGT00950000182805.a.b ENSGT00940000154551.b.i ENSGT00940000154518.b ENSGT00940000156925.v ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029.i ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 Amazon molly MODERN SPECIES 698 shtn1 (ENSPFOG00000024277) eno4 (ENSPFOG00000000231) hspa12a (ENSPFOG00000000277) pitx3 (ENSPFOG00000000330) GBF1 (ENSPFOG00000000359) cyp17a1 (ENSPFOG00000000699) borcs7 (ENSPFOG00000000793) nt5c2a (ENSPFOG00000000907) ENSPFOG00000001054 fbxw4 (ENSPFOG00000001140) fgf8a (ENSPFOG00000001304) slc2a15a (ENSPFOG00000001511) ENSPFOG00000001722 tlx1 (ENSPFOG00000001748) ENSPFOG00000001766 #22 ENSPFOG00000001789 rab1ab (ENSPFOG00000001829) hells (ENSPFOG00000001954) Sailfin molly MODERN SPECIES 1247 slc2a15a (ENSPLAG00000006606) ENSPLAG00000006573 tlx1 (ENSPLAG00000006554) ENSPLAG00000006543 #22 ENSPLAG00000006529 rab1ab (ENSPLAG00000006520) hells (ENSPLAG00000006504) eno4 (ENSPLAG00000006425) shtn1 (ENSPLAG00000006387) Guppy MODERN SPECIES 445 vax1 (ENSPREG00000018520) atp6v1ba (ENSPREG00000018542) shtn1 (ENSPREG00000018561) eno4 (ENSPREG00000018589) hspa12a (ENSPREG00000018686) pitx3 (ENSPREG00000018702) GBF1 (ENSPREG00000018759) cyp17a1 (ENSPREG00000019128) borcs7 (ENSPREG00000020069) nt5c2a (ENSPREG00000020101) ENSPREG00000020136 fgf8a (ENSPREG00000020145) slc2a15a (ENSPREG00000020156) ENSPREG00000020178 tlx1 (ENSPREG00000020203) ENSPREG00000020277 #22 ENSPREG00000020295 rab1ab (ENSPREG00000020321) hells (ENSPREG00000020337) CALHM3 (ENSPREG00000020384) ncapd3 (ENSPREG00000020416) ENSPREG00000020540 RIN2 (ENSPREG00000020566) ENSPREG00000020598 ENSPREG00000020614 ENSPREG00000020631 ciao2b (ENSPREG00000020644) ENSPREG00000020655 ENSPREG00000020793 b3gnt2b (ENSPREG00000021300) EHBP1 (ENSPREG00000021321) Platyfish MODERN SPECIES 14 shtn1 (ENSXMAG00000000782) eno4 (ENSXMAG00000000773) hspa12a (ENSXMAG00000005923) pitx3 (ENSXMAG00000005921) GBF1 (ENSXMAG00000005864) ENSXMAG00000005854 cyp17a1 (ENSXMAG00000005813) borcs7 (ENSXMAG00000025827) nt5c2a (ENSXMAG00000005784) ENSXMAG00000005779 fbxw4 (ENSXMAG00000027566) fgf8a (ENSXMAG00000025032) slc2a15a (ENSXMAG00000003577) ENSXMAG00000020837 tlx1 (ENSXMAG00000005769) ENSXMAG00000021357 #22 ENSXMAG00000021554 rab1ab (ENSXMAG00000005757) hells (ENSXMAG00000005731) CALHM3 (ENSXMAG00000005726) ncapd3 (ENSXMAG00000005697) ENSXMAG00000022977 RIN2 (ENSXMAG00000023405) ENSXMAG00000005661 ENSXMAG00000005660 ENSXMAG00000005658 ciao2b (ENSXMAG00000005652) ENSXMAG00000005623 b3gnt2b (ENSXMAG00000019808) EHBP1 (ENSXMAG00000005611) otx1 (ENSXMAG00000005604) NAME_4 ANCESTRAL SPECIES 258 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a Mummichog MODERN SPECIES 470 cyp17a1 (ENSFHEG00000001611) ENSFHEG00000001603 nt5c2a (ENSFHEG00000001596) wbp1la (ENSFHEG00000001590) fbxw4 (ENSFHEG00000001585) fgf8a (ENSFHEG00000001579) slc2a15a (ENSFHEG00000001577) ENSFHEG00000001566 tlx1 (ENSFHEG00000023201) ENSFHEG00000023010 #22 ENSFHEG00000023000 rab1ab (ENSFHEG00000022985) hells (ENSFHEG00000022950) Sheepshead minnow MODERN SPECIES 1027 ENSCVAG00000016774 zbtb18 (ENSCVAG00000016785) akt3a (ENSCVAG00000016822) sdccag8 (ENSCVAG00000016839) TNFAIP3 (ENSCVAG00000016885) perp (ENSCVAG00000016897) SDHAF4 (ENSCVAG00000016913) #22 TMEM26 (ENSCVAG00000016937) Oryzias ANCESTRAL SPECIES 6 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780.k.a ENSGT00940000155780.l ENSGT00390000000747 ENSGT01100000263502.A.a.b ENSGT00940000157736 ENSGT00950000182992.a.b.a.a ENSGT00950000183037.B.a ENSGT00390000003094 ENSGT00950000183132.B ENSGT00390000005029.k ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00940000153246.a.a.b.h ENSGT00530000068411 ENSGT00940000167270 ENSGT01070000253760.b.a.a.a.b.b ENSGT00940000158120 ENSGT00940000156925.v ENSGT00940000154518.b ENSGT00940000154551.b.i ENSGT00950000182805.a.b ENSGT00510000048167.a Oryzias_b ANCESTRAL SPECIES 49 ENSGT00940000160595.a.a ENSGT00940000156981 ENSGT00940000157500 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780.k.a ENSGT00940000157736 ENSGT00950000182992.a.b.a.a ENSGT00950000183037.B.a ENSGT00390000003094 ENSGT00950000183132.B ENSGT00390000005029.k ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00940000153246.a.a.b.h Indian medaka MODERN SPECIES 24 ENSOMEG00000005142 SLITRK5 (ENSOMEG00000005150) MID1 (ENSOMEG00000005159) ARHGAP6 (ENSOMEG00000005211) MSL3 (ENSOMEG00000005256) ##15 ENSOMEG00000005324 il1rapl1b (ENSOMEG00000005393) GPR34 (ENSOMEG00000005418) caskb (ENSOMEG00000005650) cenpl (ENSOMEG00000005689) FUNDC1 (ENSOMEG00000005715) kdm6al (ENSOMEG00000005822) ENSOMEG00000005849 rpl4 (ENSOMEG00000005867) tlx1 (ENSOMEG00000005939) ENSOMEG00000005974 #22 ENSOMEG00000005999 rab1ab (ENSOMEG00000006036) hells (ENSOMEG00000000135) CALHM3 (ENSOMEG00000006111) ENSOMEG00000006121 ENSOMEG00000006135 ENSOMEG00000006145 ENSOMEG00000006332 ADAMTS5 (ENSOMEG00000006372) ADAMTS1 (ENSOMEG00000006388) cyyr1 (ENSOMEG00000006402) APP (ENSOMEG00000006503) ENSOMEG00000006531 ENSOMEG00000006540 atp5pf (ENSOMEG00000006555) Javanese ricefish MODERN SPECIES 6 ENSOJAG00000005271 CCNJ (ENSOJAG00000005276) cpeb3 (ENSOJAG00000006321) marchf5 (ENSOJAG00000006507) ide (ENSOJAG00000006576) cdc42ep3 (ENSOJAG00000007125) ENSOJAG00000007137 ENSOJAG00000007161 cyp1b1 (ENSOJAG00000007189) nanp (ENSOJAG00000007218) polr1b (ENSOJAG00000007238) fbxw4 (ENSOJAG00000007376) fgf8a (ENSOJAG00000007416) slc2a15a (ENSOJAG00000007503) tlx1 (ENSOJAG00000007771) ENSOJAG00000007843 #22 ENSOJAG00000007852 ENSOJAG00000007883 rab1ab (ENSOJAG00000007982) hells (ENSOJAG00000008349) CALHM3 (ENSOJAG00000008718) ncapd3 (ENSOJAG00000008815) stra6l (ENSOJAG00000009728) ENSOJAG00000009740 opn3 (ENSOJAG00000009755) kmo (ENSOJAG00000009801) ide (ENSOJAG00000009987) ide (ENSOJAG00000011010) ENSOJAG00000011972 ENSOJAG00000012035 ENSOJAG00000012540 Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000158949 ENSGT00390000009948.c ENSGT00940000155780.k.a ENSGT00940000155780.l ENSGT00390000000747 ENSGT01100000263502.A.a.b ENSGT00940000157736 ENSGT00950000182992.a.b.a.a ENSGT00950000183037.B.a ENSGT00390000003094 ENSGT00950000183132.B ENSGT00390000005029.k ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b ENSGT00940000153246.a.a.b.h ENSGT00530000068411 ENSGT00940000167270 ENSGT01070000253760.b.a.a.a.b.b ENSGT00940000158120 ENSGT00940000156925.v ENSGT00940000154518.b ENSGT00940000154551.b.i ENSGT00950000182805.a.b ENSGT00510000048167.a Japanese Medaka HdrR MODERN SPECIES 6 ide (ENSORLG00000000774) kmo (ENSORLG00000000814) opn3 (ENSORLG00000000827) ENSORLG00000026964 ENSORLG00000026323 cdc42ep3 (ENSORLG00000000835) ENSORLG00000030099 ENSORLG00000023798 cyp1b1 (ENSORLG00000000853) nanp (ENSORLG00000000861) polr1b (ENSORLG00000000890) fbxw4 (ENSORLG00000000906) fgf8a (ENSORLG00000024917) slc2a15a (ENSORLG00000000924) tlx1 (ENSORLG00000000935) ENSORLG00000027360 #22 ENSORLG00000024874 rab1ab (ENSORLG00000028104) hells (ENSORLG00000000987) CALHM3 (ENSORLG00000000995) ncapd3 (ENSORLG00000001014) ENSORLG00000025120 ENSORLG00000028371 ENSORLG00000001051 ENSORLG00000001066 ENSORLG00000027498 ENSORLG00000018201 macroh2a2 (ENSORLG00000001088) GBF1 (ENSORLG00000001139) pitx3 (ENSORLG00000027925) hspa12a (ENSORLG00000001174) Chinese medaka MODERN SPECIES 70 ENSOSIG00000015756 BTAF1 (ENSOSIG00000015758) cpeb3 (ENSOSIG00000015765) marchf5 (ENSOSIG00000015823) ide (ENSOSIG00000015872) kmo (ENSOSIG00000018798) opn3 (ENSOSIG00000018802) cdc42ep3 (ENSOSIG00000018803) ENSOSIG00000018804 cyp1b1 (ENSOSIG00000018805) nanp (ENSOSIG00000018806) fbxw4 (ENSOSIG00000018808) fgf8a (ENSOSIG00000018810) slc2a15a (ENSOSIG00000018811) tlx1 (ENSOSIG00000018812) ENSOSIG00000018813 #22 ENSOSIG00000018814 rab1ab (ENSOSIG00000018820) hells (ENSOSIG00000019042) CALHM3 (ENSOSIG00000003484) ENSOSIG00000003491 CALHM3 (ENSOSIG00000003497) ENSOSIG00000003501 Ovalentaria_B ANCESTRAL SPECIES 25 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154511.a ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00530000068411 Pomacentridae ANCESTRAL SPECIES 36 ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00530000068411 ENSGT00940000163289.b.a.b ENSGT00390000015849 ENSGT00940000155588.b ENSGT00940000154681.a.f ENSGT00940000154511.a ENSGT00950000182909.b.b.b ENSGT00390000008797 Pomacentridae_A ANCESTRAL SPECIES 196 ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00530000068411 Amphiprion ANCESTRAL SPECIES 45 ENSGT00940000155493 ENSGT00940000165086.b ENSGT00940000157051 ENSGT00940000162185 ENSGT00720000108792.A ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000161907 ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000164115.A.f.b.a.a.b.a ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000182466 ENSGT01030000234610.b.a.a ENSGT00940000179143 Clown anemonefish MODERN SPECIES 3596 ENSAOCG00000006462 tlx1 (ENSAOCG00000000305) ENSAOCG00000000303 #22 cep68 (ENSAOCG00000006423) rab1ab (ENSAOCG00000006385) hells (ENSAOCG00000006348) CALHM3 (ENSAOCG00000006273) ENSAOCG00000006231 calhm2.1 (ENSAOCG00000006221) ENSAOCG00000006209 ncapd3 (ENSAOCG00000006183) ENSAOCG00000006151 ENSAOCG00000006131 Orange clownfish MODERN SPECIES 12 vwc2 (ENSAPEG00000000741) ikzf1 (ENSAPEG00000000762) fignl1 (ENSAPEG00000000794) ttl (ENSAPEG00000000811) wbp1la (ENSAPEG00000000943) fbxw4 (ENSAPEG00000001006) ENSAPEG00000001047 fgf8a (ENSAPEG00000001059) slc2a15a (ENSAPEG00000001082) ENSAPEG00000001191 ENSAPEG00000001218 ENSAPEG00000001269 ENSAPEG00000001282 ENSAPEG00000001289 tlx1 (ENSAPEG00000001309) ENSAPEG00000001331 #22 cep68 (ENSAPEG00000001346) rab1ab (ENSAPEG00000001358) hells (ENSAPEG00000001422) CALHM3 (ENSAPEG00000001492) ENSAPEG00000001536 ENSAPEG00000001551 ENSAPEG00000001567 calhm2.1 (ENSAPEG00000001579) ENSAPEG00000001586 ENSAPEG00000001663 nt5c2a (ENSAPEG00000001693) borcs7 (ENSAPEG00000001760) cyp17a1 (ENSAPEG00000001772) ENSAPEG00000001814 RNF166 (ENSAPEG00000001824) Spiny chromis MODERN SPECIES 796 wbp1la (ENSAPOG00000007967) fbxw4 (ENSAPOG00000007951) fgf8a (ENSAPOG00000007933) slc2a15a (ENSAPOG00000007916) ENSAPOG00000007830 tlx1 (ENSAPOG00000007816) ENSAPOG00000007793 #22 cep68 (ENSAPOG00000007771) rab1ab (ENSAPOG00000007746) hells (ENSAPOG00000007707) CALHM3 (ENSAPOG00000007624) Bicolor damselfish MODERN SPECIES 1883 ENSSPAG00000015529 tlx1 (ENSSPAG00000015537) ENSSPAG00000015545 #22 cep68 (ENSSPAG00000015550) rab1ab (ENSSPAG00000015564) hells (ENSSPAG00000015579) ENSSPAG00000015646 ENSSPAG00000015658 Cichlidae ANCESTRAL SPECIES 58 ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154511.a ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234642.a.b.b.d.a.e ENSGT00510000047589 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.a ENSGT00940000164286.j.b.b ENSGT00390000010672 ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157563 ENSGT00940000157348 ENSGT00390000012337 Midas cichlid MODERN SPECIES 304 cdk1 (ENSACIG00000019771) ENSACIG00000019762 RNF166 (ENSACIG00000019736) ENSACIG00000019727 cyp17a1 (ENSACIG00000019699) borcs7 (ENSACIG00000019682) nt5c2a (ENSACIG00000019651) wbp1la (ENSACIG00000019632) fbxw4 (ENSACIG00000019546) fgf8a (ENSACIG00000019536) slc2a15a (ENSACIG00000019508) ENSACIG00000019501 tlx1 (ENSACIG00000019485) ENSACIG00000019477 #22 ENSACIG00000019466 rab1ab (ENSACIG00000019049) ENSACIG00000019020 hells (ENSACIG00000018996) ENSACIG00000018911 chchd1 (ENSACIG00000018903) ENSACIG00000018885 galm (ENSACIG00000018827) HNRNPLL (ENSACIG00000018811) Pseudocrenilabrinae ANCESTRAL SPECIES 38 ENSGT00940000165200 ENSGT00510000047676 ENSGT00940000153168.B ENSGT00940000153566.b ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234642.a.b.b.d.a.e ENSGT00510000047589 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.a ENSGT00940000164286.j.b.b ENSGT00390000010672 ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157348 ENSGT00390000012337 ENSGT00390000017259 Nile tilapia MODERN SPECIES 4 ncapd3 (ENSONIG00000009159) cdk1 (ENSONIG00000009163) CTU2 (ENSONIG00000009166) RNF166 (ENSONIG00000029083) cyp17 (ENSONIG00000009168) borcs7 (ENSONIG00000038162) ENSONIG00000041259 nt5c2a (ENSONIG00000009175) ENSONIG00000030814 ENSONIG00000031213 fbxw4 (ENSONIG00000013182) fgf8a (ENSONIG00000013179) slc2a15a (ENSONIG00000013174) ENSONIG00000013173 tlx1 (ENSONIG00000013171) ENSONIG00000027250 #22 cep68 (ENSONIG00000013169) ENSONIG00000040852 rab1ab (ENSONIG00000042001) hells (ENSONIG00000013166) HNRNPLL (ENSONIG00000013164) ENSONIG00000034160 galm (ENSONIG00000013162) ENSONIG00000013158 chchd1 (ENSONIG00000040274) ENSONIG00000013156 ENSONIG00000035825 vps8 (ENSONIG00000041015) ENSONIG00000043215 pcca (ENSONIG00000013151) PIEZO1 (ENSONIG00000013147) Pseudocrenilabrinae_A ANCESTRAL SPECIES 61 ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234642.a.b.b.d.a.e ENSGT00510000047589 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.a ENSGT00530000068411 ENSGT00940000164286.j.b.b ENSGT00390000010672 ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157348 ENSGT00390000012337 Lyretail cichlid MODERN SPECIES 596 ENSNBRG00000024237 tlx1 (ENSNBRG00000024238) ENSNBRG00000024239 #22 ENSNBRG00000024240 rab1ab (ENSNBRG00000024241) hells (ENSNBRG00000024242) ENSNBRG00000024243 HNRNPLL (ENSNBRG00000024244) galm (ENSNBRG00000024247) Haplochromini ANCESTRAL SPECIES 72 ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234642.a.b.b.d.a.e ENSGT00510000047589 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.a ENSGT00530000068411 ENSGT00940000164286.j.b.b ENSGT00390000010672 ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157348 ENSGT00390000012337 Burton s mouthbrooder MODERN SPECIES 729 ENSHBUG00000010429 tlx1 (ENSHBUG00000010395) ENSHBUG00000010382 #22 ENSHBUG00000010360 rab1ab (ENSHBUG00000010304) hells (ENSHBUG00000010270) HNRNPLL (ENSHBUG00000010190) ENSHBUG00000010144 chchd1 (ENSHBUG00000010084) ENSHBUG00000010037 ENSHBUG00000009918 ENSHBUG00000009901 Haplochromini_A ANCESTRAL SPECIES 80 ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234642.a.b.b.d.a.e ENSGT00510000047589 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.a ENSGT00530000068411 ENSGT00940000164286.j.b.b ENSGT00390000010672 ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157348 ENSGT00390000012337 P. nyererei MODERN SPECIES 551 ENSPNYG00000009365 ENSPNYG00000009343 tlx1 (ENSPNYG00000009269) ENSPNYG00000009245 #22 ENSPNYG00000009220 rab1ab (ENSPNYG00000009172) hells (ENSPNYG00000009100) HNRNPLL (ENSPNYG00000009070) galm (ENSPNYG00000009054) ENSPNYG00000009004 chchd1 (ENSPNYG00000008993) ENSPNYG00000008849 ENSPNYG00000008810 ENSPNYG00000008793 vps8 (ENSPNYG00000008392) ENSPNYG00000008274 pcca (ENSPNYG00000008226) PIEZO1 (ENSPNYG00000008125) CDT1 (ENSPNYG00000008087) Haplochromini_B ANCESTRAL SPECIES 87 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000159658.a.a ENSGT00940000157303.e ENSGT00940000165756.B.g.a.b.a ENSGT00950000183075.a.a.a.a ENSGT00910000144630.a ENSGT00390000011034 ENSGT00940000155310.a.b ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234642.a.b.b.d.a.e ENSGT00510000047589 ENSGT00390000014293.b ENSGT00390000007683 ENSGT00940000164412.a.a.a ENSGT00530000068411 ENSGT00940000164286.j.b.b ENSGT00390000010672 ENSGT00940000154200.A.b ENSGT00940000156083 ENSGT00940000157348 ENSGT00390000012337 Eastern happy MODERN SPECIES 4 KCNG3 (ENSACLG00000008176) prph2b (ENSACLG00000008164) ENSACLG00000008163 UBR2 (ENSACLG00000007953) ENSACLG00000007947 ENSACLG00000007941 ENSACLG00000007934 ENSACLG00000007925 prkn (ENSACLG00000007913) ENSACLG00000007904 ENSACLG00000007900 ENSACLG00000007898 ENSACLG00000007720 ENSACLG00000007712 tlx1 (ENSACLG00000007705) ENSACLG00000007691 #22 ENSACLG00000007666 rab1ab (ENSACLG00000007644) hells (ENSACLG00000007613) HNRNPLL (ENSACLG00000007597) galm (ENSACLG00000007294) ENSACLG00000007203 ENSACLG00000007194 chchd1 (ENSACLG00000007183) ENSACLG00000007179 ENSACLG00000007167 ENSACLG00000007100 ENSACLG00000007089 ENSACLG00000007085 ENSACLG00000007082 vps8 (ENSACLG00000007042) Zebra mbuna MODERN SPECIES 1095 ENSMZEG00005018229 ENSMZEG00005018235 ENSMZEG00005018240 ENSMZEG00005018253 ENSMZEG00005018270 tspan14 (ENSMZEG00005018308) KCNG3 (ENSMZEG00005018314) prph2b (ENSMZEG00005018317) ENSMZEG00005018320 UBR2 (ENSMZEG00005018328) ENSMZEG00005018348 prkn (ENSMZEG00005018356) ENSMZEG00005018363 ENSMZEG00005018367 tlx1 (ENSMZEG00005018376) ENSMZEG00005018394 #22 ENSMZEG00005018401 rab1ab (ENSMZEG00005018407) hells (ENSMZEG00005018414) HNRNPLL (ENSMZEG00005018424) galm (ENSMZEG00005018434) ENSMZEG00005018440 chchd1 (ENSMZEG00005018448) ENSMZEG00005018450 ENSMZEG00005018455 vps8 (ENSMZEG00005018464) ENSMZEG00005018477 ENSMZEG00005018481 pcca (ENSMZEG00005018487) PIEZO1 (ENSMZEG00005018494) CDT1 (ENSMZEG00005018509) Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154511.a ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b ENSGT00940000164978.b.c ENSGT00940000158042 ENSGT00390000005537 Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b ENSGT00940000158042 ENSGT00390000005537 ENSGT00910000147025 Anabantaria ANCESTRAL SPECIES 17 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b ENSGT00940000158042 ENSGT00390000005537 ENSGT00910000147025 ENSGT00940000156983.a.b ENSGT00940000155134.y #29 Zig-zag eel MODERN SPECIES 6 ENSMAMG00000009850 ENSMAMG00000009356 ENSMAMG00000009341 ENSMAMG00000009304 ENSMAMG00000009280 ENSMAMG00000009262 ENSMAMG00000009255 cyp17a1 (ENSMAMG00000009230) ENSMAMG00000009222 nt5c2a (ENSMAMG00000009164) fbxw4 (ENSMAMG00000009140) fgf8a (ENSMAMG00000009113) slc2a15a (ENSMAMG00000009076) ENSMAMG00000026497 tlx1 (ENSMAMG00000009039) ENSMAMG00000009027 #22 ENSMAMG00000009009 ENSMAMG00000008995 ENSMAMG00000008958 PIEZO1 (ENSMAMG00000008871) ENSMAMG00000008851 aprt (ENSMAMG00000026356) ENSMAMG00000008803 ENSMAMG00000008789 nvl (ENSMAMG00000008767) ENSMAMG00000008758 fbxo28 (ENSMAMG00000024850) ENSMAMG00000008700 ENSMAMG00000008673 ENSMAMG00000008615 zswim8 (ENSMAMG00000008438) Anabantoidei ANCESTRAL SPECIES 17 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00940000157361.b ENSGT00940000158042 ENSGT00390000005537 ENSGT00910000147025 ENSGT00940000156983.a.b ENSGT00940000155134.y #29 ENSGT00950000183045.A.a.a ENSGT00390000018730.B #28 ENSGT00940000159583 #24 Climbing perch MODERN SPECIES 6 ENSATEG00000006517 ENSATEG00000006538 ENSATEG00000006613 ENSATEG00000006626 ENSATEG00000006645 cyp17a1 (ENSATEG00000006671) ENSATEG00000027968 nt5c2a (ENSATEG00000007708) wbp1la (ENSATEG00000028457) ENSATEG00000007857 fbxw4 (ENSATEG00000007875) fgf8a (ENSATEG00000026743) slc2a15a (ENSATEG00000007930) ENSATEG00000007988 tlx1 (ENSATEG00000008007) ENSATEG00000028010 #22 ENSATEG00000008036 ENSATEG00000008052 ENSATEG00000008107 ENSATEG00000008203 ENSATEG00000008251 ENSATEG00000008267 CCDC85A (ENSATEG00000008323) ENSATEG00000008364 FANCL (ENSATEG00000008380) ENSATEG00000025669 ENSATEG00000027192 ENSATEG00000008394 RIMS1 (ENSATEG00000008497) #29 asrgl1 (ENSATEG00000008570) OGFRL1 (ENSATEG00000008583) #28 Siamese fighting fish MODERN SPECIES 6 HNRNPLL (ENSBSLG00000019836) RNF166 (ENSBSLG00000019612) ctu2 (ENSBSLG00000019434) cdk1 (ENSBSLG00000019295) cyp17a1 (ENSBSLG00000018948) borcs7 (ENSBSLG00000018888) nt5c2a (ENSBSLG00000018270) ENSBSLG00000018157 fgf8a (ENSBSLG00000017970) fbxw4 (ENSBSLG00000017928) slc2a15a (ENSBSLG00000017772) ENSBSLG00000017749 ENSBSLG00000017735 ENSBSLG00000017719 tlx1 (ENSBSLG00000017662) ENSBSLG00000017648 #22 ENSBSLG00000017633 ENSBSLG00000017629 rab1ab (ENSBSLG00000017531) hells (ENSBSLG00000017428) CALHM3 (ENSBSLG00000017409) calhm2.1 (ENSBSLG00000017403) ncapd3 (ENSBSLG00000017235) ENSBSLG00000017204 ENSBSLG00000017159 ENSBSLG00000016734 ENSBSLG00000016317 pcca (ENSBSLG00000015707) FAM98A (ENSBSLG00000015581) ENSBSLG00000015566 ENSBSLG00000015336 Carangaria ANCESTRAL SPECIES 19 ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00940000157361.b ENSGT00940000158042 ENSGT00390000005537 ENSGT00910000147025 ENSGT00940000156983.a.b ENSGT00940000155134.y #29 ENSGT00950000183045.A.a.a ENSGT00390000018730.B #28 Pleuronectoidei ANCESTRAL SPECIES 107 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT00940000153566.b Turbot MODERN SPECIES 6 pdxkb (ENSSMAG00000028455) ENSSMAG00000037229 ENSSMAG00000001127 cryzl1 (ENSSMAG00000001067) setd4 (ENSSMAG00000001111) ENSSMAG00000001052 ENSSMAG00000001041 cyp17a1 (ENSSMAG00000001013) ENSSMAG00000001004 nt5c2a (ENSSMAG00000000954) ENSSMAG00000032721 ENSSMAG00000000880 fgf8a (ENSSMAG00000034015) ENSSMAG00000019969 ENSSMAG00000019960 ENSSMAG00000037166 #22 ENSSMAG00000019950 slc2a15a (ENSSMAG00000019977) ENSSMAG00000019908 ENSSMAG00000019886 fbxo5 (ENSSMAG00000019877) vip (ENSSMAG00000033181) ENSSMAG00000019782 ENSSMAG00000019747 ENSSMAG00000019790 ENSSMAG00000019724 zgc:65997 (ENSSMAG00000019711) nphp1 (ENSSMAG00000019664) ENSSMAG00000019652 malb (ENSSMAG00000022037) mrps5 (ENSSMAG00000019624) Tongue sole MODERN SPECIES 3 wipf1a (ENSCSEG00000016716) ENSCSEG00000016723 ciao2b (ENSCSEG00000016730) cdh1 (ENSCSEG00000016749) RIN2 (ENSCSEG00000016764) ENSCSEG00000016789 ENSCSEG00000016841 borcs7 (ENSCSEG00000016849) cyp17a1 (ENSCSEG00000016867) ctu2 (ENSCSEG00000016884) wbp1la (ENSCSEG00000016898) slc2a15a (ENSCSEG00000016904) fgf8a (ENSCSEG00000016911) fbxw4 (ENSCSEG00000016917) tlx1 (ENSCSEG00000016924) ENSCSEG00000016934 #22 ENSCSEG00000016941 hells (ENSCSEG00000016985) CALHM3 (ENSCSEG00000017051) ncapd3 (ENSCSEG00000017061) MCM8 (ENSCSEG00000017142) CRLS1 (ENSCSEG00000017167) ENSCSEG00000017170 ENSCSEG00000017185 ENSCSEG00000017237 si:ch73-130a3.4 (ENSCSEG00000017296) cdc5l (ENSCSEG00000017309) supt3h (ENSCSEG00000017349) ENSCSEG00000017387 gja5b (ENSCSEG00000017394) ENSCSEG00000017398 Carangaria_A ANCESTRAL SPECIES 31 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154511.a ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00940000158042 ENSGT00390000005537 ENSGT00940000156983.a.b ENSGT00940000155134.y #29 ENSGT00950000183045.A.a.a ENSGT00390000018730.B #28 ENSGT00940000159583 #24 ENSGT00940000155884.a.c #23 Seriola ANCESTRAL SPECIES 14 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154511.a ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000179143 ENSGT00940000153566.b ENSGT00940000164978.b.c ENSGT00940000158042 ENSGT00390000005537 ENSGT00940000156983.a.b ENSGT00940000155134.y #29 ENSGT00950000183045.A.a.a ENSGT00390000018730.B #28 ENSGT00940000159583 #24 Greater amberjack MODERN SPECIES 30 fbxw4 (ENSSDUG00000016703) fgf8a (ENSSDUG00000016733) slc2a15a (ENSSDUG00000016737) ENSSDUG00000016763 tlx1 (ENSSDUG00000016770) ENSSDUG00000016787 #22 ENSSDUG00000016800 rab1ab (ENSSDUG00000016888) hells (ENSSDUG00000016924) CALHM3 (ENSSDUG00000017015) calhm2.1 (ENSSDUG00000017039) ncapd3 (ENSSDUG00000017066) zgc:175280 (ENSSDUG00000017134) ENSSDUG00000017182 vrk2 (ENSSDUG00000017194) fancl (ENSSDUG00000017224) ENSSDUG00000017276 ENSSDUG00000017290 RIMS1 (ENSSDUG00000017330) #29 asrgl1 (ENSSDUG00000017515) OGFRL1 (ENSSDUG00000017527) #28 Yellowtail amberjack MODERN SPECIES 3109 galm (ENSSLDG00000018600) HNRNPLL (ENSSLDG00000018626) cdk1 (ENSSLDG00000018654) ctu2 (ENSSLDG00000018672) RNF166 (ENSSLDG00000018689) ENSSLDG00000018704 cyp17a1 (ENSSLDG00000018716) borcs7 (ENSSLDG00000018734) nt5c2a (ENSSLDG00000018749) wbp1la (ENSSLDG00000018784) fbxw4 (ENSSLDG00000018817) fgf8a (ENSSLDG00000018838) slc2a15a (ENSSLDG00000018856) ENSSLDG00000018888 tlx1 (ENSSLDG00000018898) ENSSLDG00000018910 #22 ENSSLDG00000018925 rab1ab (ENSSLDG00000018942) hells (ENSSLDG00000018960) CALHM3 (ENSSLDG00000019000) calhm2.1 (ENSSLDG00000019017) ENSSLDG00000019024 ncapd3 (ENSSLDG00000019038) zgc:175280 (ENSSLDG00000019070) ENSSLDG00000019095 ENSSLDG00000019106 fancl (ENSSLDG00000019147) ENSSLDG00000019191 RIMS1 (ENSSLDG00000019205) #29 asrgl1 (ENSSLDG00000019318) OGFRL1 (ENSSLDG00000019346) #28 Barramundi perch MODERN SPECIES 338 HNRNPLL (ENSLCAG00010013250) cdk1 (ENSLCAG00010013233) ctu2 (ENSLCAG00010013230) RNF166 (ENSLCAG00010013229) ENSLCAG00010013228 cyp17a1 (ENSLCAG00010013188) borcs7 (ENSLCAG00010013169) nt5c2a (ENSLCAG00010013040) wbp1la (ENSLCAG00010012975) fbxw4 (ENSLCAG00010012970) fgf8a (ENSLCAG00010012964) slc2a15a (ENSLCAG00010012928) ENSLCAG00010012914 tlx1 (ENSLCAG00010012909) ENSLCAG00010012907 #22 cep68 (ENSLCAG00010012901) rab1ab (ENSLCAG00010012896) hells (ENSLCAG00010012788) CALHM3 (ENSLCAG00010012762) calhm2.1 (ENSLCAG00010012756) ncapd3 (ENSLCAG00010012677) Eupercaria ANCESTRAL SPECIES 15 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b ENSGT00940000164978.b.c ENSGT00940000158042 ENSGT00390000005537 ENSGT00910000147025 Tetraodontidae ANCESTRAL SPECIES 83 ENSGT00940000164286.j.b.b ENSGT00390000010672 ENSGT00440000037341.a ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b Fugu MODERN SPECIES 16 vps8 (ENSTRUG00000026854) ENSTRUG00000029940 ctu2 (ENSTRUG00000027026) FAM98A (ENSTRUG00000027624) RNF166 (ENSTRUG00000031483) ENSTRUG00000026748 cyp17a1 (ENSTRUG00000001509) borcs7 (ENSTRUG00000032893) nt5c2a (ENSTRUG00000001182) wbp1la (ENSTRUG00000032138) fbxw4 (ENSTRUG00000001025) fgf8a (ENSTRUG00000000925) slc2a15a (ENSTRUG00000000474) ENSTRUG00000000457 tlx1 (ENSTRUG00000000431) ENSTRUG00000028920 #22 ENSTRUG00000023025 rab1ab (ENSTRUG00000023164) hells (ENSTRUG00000000350) CALHM3 (ENSTRUG00000000336) dnajc12 (ENSTRUG00000024432) SIRT1 (ENSTRUG00000017974) CACUL1 (ENSTRUG00000020565) MYPN (ENSTRUG00000017955) atoh7 (ENSTRUG00000017954) TIAL1 (ENSTRUG00000020927) inpp5f (ENSTRUG00000017919) mcmbp (ENSTRUG00000017916) sec23ip (ENSTRUG00000017907) csgalnact2 (ENSTRUG00000017903) ret (ENSTRUG00000017885) Tetraodon MODERN SPECIES 26 b3gnt5a (ENSTNIG00000019824) ENSTNIG00000019819 ENSTNIG00000001058 ENSTNIG00000019738 ENSTNIG00000019588 ENSTNIG00000019608 ENSTNIG00000019648 ENSTNIG00000019649 edar (ENSTNIG00000019463) FGF13 (ENSTNIG00000019669) ENSTNIG00000019658 ENSTNIG00000019825 ENSTNIG00000001883 ENSTNIG00000019551 ENSTNIG00000019532 ENSTNIG00000019524 #22 ENSTNIG00000001635 pik3r1 (ENSTNIG00000019477) ENSTNIG00000001538 ENSTNIG00000019465 ENSTNIG00000019601 ENSTNIG00000019610 ENSTNIG00000019491 ##31 ENSTNIG00000019529 ENSTNIG00000019808 polr1c (ENSTNIG00000019804) ENSTNIG00000019805 ENSTNIG00000019724 ENSTNIG00000019708 ENSTNIG00000019769 ENSTNIG00000019801 Eupecaria_A ANCESTRAL SPECIES 26 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b ENSGT00940000164978.b.c ENSGT00940000158042 ENSGT00390000005537 ENSGT00910000147025 Ballan wrasse MODERN SPECIES 18 tlx1 (ENSLBEG00000027749) ENSLBEG00000027757 #22 cep68 (ENSLBEG00000027768) rab1ab (ENSLBEG00000027781) hells (ENSLBEG00000027807) PDZD8 (ENSLBEG00000027834) slc18a2 (ENSLBEG00000027865) ENSLBEG00000027902 ENSLBEG00000027906 vax1 (ENSLBEG00000027910) atp6v1ba (ENSLBEG00000027920) shtn1 (ENSLBEG00000027938) hspa12a (ENSLBEG00000027962) PNLIPRP2 (ENSLBEG00000028003) pitx3 (ENSLBEG00000028018) GBF1 (ENSLBEG00000028029) macroh2a2 (ENSLBEG00000028058) Eupecaria_B ANCESTRAL SPECIES 26 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00940000166683.b ENSGT00940000154866.B.a ENSGT01030000234532.A.a.a.b.j.a ENSGT00940000170402 ENSGT00940000157361.b ENSGT00940000164978.b.c ENSGT00940000158042 ENSGT00390000005537 ENSGT00910000147025 Perciformes ANCESTRAL SPECIES 40 ENSGT00390000014293.b ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029.n ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b Cottioidei ANCESTRAL SPECIES 36 ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029.n ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b ENSGT00940000159378 ENSGT00940000159406 ENSGT00390000000403 ENSGT00940000153441.a.b ENSGT00940000161556 ENSGT00940000157274 ENSGT00940000154962.B ENSGT00940000159204 ENSGT00940000155996 Stickleback MODERN SPECIES 6 mlh1 (ENSGACG00000003638) ENSGACG00000003675 HERC4 (ENSGACG00000003677) ENSGACG00000003705 ENSGACG00000003723 ablim1a (ENSGACG00000003725) fhip2a (ENSGACG00000003758) srfb (ENSGACG00000003778) wbp1la (ENSGACG00000003782) fbxw4 (ENSGACG00000003785) fgf8a (ENSGACG00000003803) slc2a15a (ENSGACG00000003828) ENSGACG00000003848 ENSGACG00000003856 tlx1 (ENSGACG00000003860) ENSGACG00000003861 #22 ENSGACG00000003862 rab1ab (ENSGACG00000003864) hells (ENSGACG00000003897) CALHM3 (ENSGACG00000003915) calhm2.1 (ENSGACG00000003917) ncapd3 (ENSGACG00000003922) mxtx1 (ENSGACG00000003944) ENSGACG00000003951 sertad2b (ENSGACG00000003958) slc1a4 (ENSGACG00000003961) smap1 (ENSGACG00000003966) #23 b3gat2 (ENSGACG00000003974) #24 OGFRL1 (ENSGACG00000003979) #28 asrgl1 (ENSGACG00000003982) RIMS1 (ENSGACG00000004016) #29 Perciformes_a ANCESTRAL SPECIES 35 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154511.a ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029.n ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b ENSGT01030000234610.b.a.a ENSGT00940000153566.b Channel bull blenny MODERN SPECIES 6 chchd1 (ENSCGOG00000014426) ENSCGOG00000014412 cdk1 (ENSCGOG00000014119) nt5c2a (ENSCGOG00000013879) borcs7 (ENSCGOG00000013875) cyp17a1 (ENSCGOG00000013001) ENSCGOG00000012952 ctu2 (ENSCGOG00000012712) ENSCGOG00000012706 wbp1la (ENSCGOG00000012704) fbxw4 (ENSCGOG00000012699) fgf8a (ENSCGOG00000012691) slc2a15a (ENSCGOG00000012675) ENSCGOG00000012669 tlx1 (ENSCGOG00000012667) ENSCGOG00000012664 #22 ENSCGOG00000012659 ENSCGOG00000012658 Pike perch MODERN SPECIES 193 ctu2 (ENSSLUG00000023491) RNF166 (ENSSLUG00000023484) ENSSLUG00000023481 ENSSLUG00000023478 cyp17a1 (ENSSLUG00000023412) borcs7 (ENSSLUG00000023402) nt5c2a (ENSSLUG00000023014) ENSSLUG00000022977 wbp1la (ENSSLUG00000022974) fbxw4 (ENSSLUG00000022969) fgf8a (ENSSLUG00000022963) slc2a15a (ENSSLUG00000022955) ENSSLUG00000022951 ENSSLUG00000022945 tlx1 (ENSSLUG00000022940) ENSSLUG00000022937 #22 ENSSLUG00000022929 rab1ab (ENSSLUG00000022817) hells (ENSSLUG00000022754) CALHM3 (ENSSLUG00000022731) calhm2.1 (ENSSLUG00000022728) ncapd3 (ENSSLUG00000022558) Eupecaria_C ANCESTRAL SPECIES 28 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b Gilthead seabream MODERN SPECIES 6 ENSSAUG00010016731 HNRNPLL (ENSSAUG00010016743) cdk1 (ENSSAUG00010017703) ctu2 (ENSSAUG00010017706) RNF166 (ENSSAUG00010017708) ENSSAUG00010017709 cyp17a1 (ENSSAUG00010017711) borcs7 (ENSSAUG00010017727) nt5c2a (ENSSAUG00010017736) ENSSAUG00010017755 fbxw4 (ENSSAUG00010017756) fgf8a (ENSSAUG00010017764) slc2a15a (ENSSAUG00010017768) ENSSAUG00010017772 tlx1 (ENSSAUG00010017774) SDHAF4 (ENSSAUG00010012877) #22 ENSSAUG00010012878 aprt (ENSSAUG00010012880) CDT1 (ENSSAUG00010012881) PIEZO1 (ENSSAUG00010012919) tm9sf2 (ENSSAUG00010016346) ENSSAUG00010018551 sgms1a (ENSSAUG00010018552) prkg1a (ENSSAUG00010018558) dkk1a (ENSSAUG00010018568) pcdh15a (ENSSAUG00010018569) plek (ENSSAUG00010018664) prokr1b (ENSSAUG00010018668) BFSP1 (ENSSAUG00010018670) pcsk2 (ENSSAUG00010018686) OTOR (ENSSAUG00010018723) Eupercaria_incertae_sedis ANCESTRAL SPECIES 32 ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00940000153335.a.b ENSGT00390000008797 ENSGT00950000182909.b.b.b ENSGT00940000154681.a.f ENSGT00940000155588.b ENSGT00390000015849 ENSGT00940000163289.b.a.b ENSGT00950000183109.c.a.a.a.a ENSGT00390000005029 ENSGT00940000159518.a ENSGT00940000164095.a ENSGT00940000164611.a.b ENSGT00940000158698 ENSGT00390000009155 #22 ENSGT00810000125473.A ENSGT00940000155078.a.b.a.b ENSGT00740000115593 ENSGT01030000234610.b.a.b.b Large yellow croaker MODERN SPECIES 2 fgf5 (ENSLCRG00005020520) cfap299 (ENSLCRG00005020522) bmp3 (ENSLCRG00005020524) prkg2 (ENSLCRG00005020530) rasgef1ba (ENSLCRG00005020540) ENSLCRG00005020548 tmem175 (ENSLCRG00005020549) ENSLCRG00005020553 WDFY3 (ENSLCRG00005020725) ENSLCRG00005000079 ENSLCRG00005000086 RUSC2 (ENSLCRG00005000094) ENSLCRG00005000107 ENSLCRG00005000114 tlx1 (ENSLCRG00005000123) ENSLCRG00005000125 #22 cep68 (ENSLCRG00005000130) rab1ab (ENSLCRG00005000142) hells (ENSLCRG00005000195) CALHM3 (ENSLCRG00005000302) ENSLCRG00005000309 ENSLCRG00005000317 ENSLCRG00005000321 ENSLCRG00005000326 pcca (ENSLCRG00005000375) ENSLCRG00005000529 vps8 (ENSLCRG00005000538) ENSLCRG00005005179 calhm2.1 (ENSLCRG00005005181) ncapd3 (ENSLCRG00005005192) ENSLCRG00005005472 Spotted gar MODERN SPECIES 654 khdrbs2 (ENSLOCG00000017016) ENSLOCG00000017017 lgsn (ENSLOCG00000017019) #7 ptp4a1 (ENSLOCG00000017023) #8 PHF3 (ENSLOCG00000017027) #9 ENSLOCG00000017039 ENSLOCG00000017043 ENSLOCG00000017044 zgc:171579 (ENSLOCG00000017369) ADGRB3 (ENSLOCG00000017045) #13 lmbrd1 (ENSLOCG00000017055) #18 COL19A1 (ENSLOCG00000017062) #19 col9a1b (ENSLOCG00000017076) #20 fam135a (ENSLOCG00000017093) #21 cenpk (ENSLOCG00000017098) SDHAF4 (ENSLOCG00000017100) #22 smap1 (ENSLOCG00000017101) #23 b3gat2 (ENSLOCG00000017110) #24 OGFRL1 (ENSLOCG00000017116) #28 Reedfish MODERN SPECIES 6 cdc42ep3 (ENSECRG00000013630) NLRC4 (ENSECRG00000013648) opn3 (ENSECRG00000013668) kmo (ENSECRG00000013707) fh (ENSECRG00000013816) rgs7a (ENSECRG00000013965) grem2b (ENSECRG00000014180) FMN2 (ENSECRG00000014226) CHRM3 (ENSECRG00000014350) ENSECRG00000014380 RYR2 (ENSECRG00000014765) mtr (ENSECRG00000016740) ENSECRG00000016791 #20 fam135a (ENSECRG00000016823) #21 ENSECRG00000016915 SDHAF4 (ENSECRG00000016940) #22 smap1 (ENSECRG00000016957) #23 b3gat2 (ENSECRG00000016981) #24 OGFRL1 (ENSECRG00000016996) #28 asrgl1 (ENSECRG00000017024) RIMS1 (ENSECRG00000017153) #29 ENSECRG00000017435 ENSECRG00000017473 KCNQ5 (ENSECRG00000017518) #31 ddx43 (ENSECRG00000017694) CGAS (ENSECRG00000017882) #37 eef1a1a (ENSECRG00000017895) SLC17A5 (ENSECRG00000017914) RIN2 (ENSECRG00000017944) SLC24A3 (ENSECRG00000017986) dtd1 (ENSECRG00000018026) Elephant shark MODERN SPECIES 1605 chrm2a (ENSCMIG00000013319) ENSCMIG00000013318 ENSCMIG00000013314 ENSCMIG00000013312 mtpn (ENSCMIG00000013301) ENSCMIG00000013299 ADGRB3 (ENSCMIG00000013189) #13 lmbrd1 (ENSCMIG00000013064) #18 ENSCMIG00000013042 ENSCMIG00000013041 ENSCMIG00000013040 ENSCMIG00000013038 #20 fam135a (ENSCMIG00000012927) #21 ENSCMIG00000012891 ENSCMIG00000012889 #22 smap1 (ENSCMIG00000012887) #23 b3gat2 (ENSCMIG00000012883) #24 ENSCMIG00000012882 #28 asrgl1 (ENSCMIG00000012879) RIMS1 (ENSCMIG00000012751) #29 ENSCMIG00000012712 ENSCMIG00000012708