Murinae	ANCESTRAL SPECIES	25	ENSGT00510000049549 #8	ENSGT00500000045074 #9	ENSGT00940000160356 #10	ENSGT00940000162161.A #11	ENSGT00940000159142 #12	ENSGT00940000156523.b #13	ENSGT00390000008060 #14	ENSGT00940000161721 #15	ENSGT00940000157113 #16	ENSGT00940000161332 #17	ENSGT00940000162457	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #28	ENSGT00940000160899 #29	ENSGT00390000000289 #30	ENSGT00940000161021 #31	ENSGT00390000013329	ENSGT00940000154355	ENSGT00940000161439	ENSGT00950000183110.b.a	ENSGT00390000013841	ENSGT00940000161913	ENSGT00940000159946
Mus	ANCESTRAL SPECIES	15	ENSGT00510000049549 #8	ENSGT00500000045074 #9	ENSGT00940000160356 #10	ENSGT00940000162161.A #11	ENSGT00940000159142 #12	ENSGT00940000156523.b #13	ENSGT00390000008060 #14	ENSGT00940000161721 #15	ENSGT00940000157113 #16	ENSGT00940000161332 #17	ENSGT00940000162457	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #28	ENSGT00940000160899 #29	ENSGT00390000000289 #30	ENSGT00940000161021 #31	ENSGT00390000013329	ENSGT00940000154355	ENSGT00940000161439	ENSGT00950000183110.b.a	ENSGT00390000013841	ENSGT00940000161913	ENSGT00940000159946
Mus_A	ANCESTRAL SPECIES	11	ENSGT00510000049549 #8	ENSGT00500000045074 #9	ENSGT00940000160356.k #10	ENSGT00940000162161.A #11	ENSGT00940000159142 #12	ENSGT00940000156523.b #13	ENSGT00390000008060 #14	ENSGT00940000161721 #15	ENSGT00940000157113 #16	ENSGT00940000161332 #17	ENSGT00940000162457	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #28	ENSGT00940000160899 #29	ENSGT00390000000289 #30	ENSGT00940000161021 #31	ENSGT00390000013329	ENSGT00940000154355	ENSGT00940000161439	ENSGT00950000183110.b.a	ENSGT00390000013841	ENSGT00940000161913	ENSGT00940000159946
Mus_B	ANCESTRAL SPECIES	10	ENSGT00510000049549 #8	ENSGT00500000045074 #9	ENSGT00940000160356.k #10	ENSGT00940000162161.A #11	ENSGT00940000159142 #12	ENSGT00940000156523.b #13	ENSGT00390000008060 #14	ENSGT00940000161721 #15	ENSGT00940000157113 #16	ENSGT00940000161332 #17	ENSGT00940000162457	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #28	ENSGT00940000160899 #29	ENSGT00390000000289 #30	ENSGT00940000161021 #31	ENSGT00390000013329	ENSGT00940000154355	ENSGT00940000161439	ENSGT00950000183110.b.a	ENSGT00390000013841	ENSGT00940000161913	ENSGT00940000159946
Mus_C	ANCESTRAL SPECIES	7	ENSGT00510000049549 #8	ENSGT00500000045074 #9	ENSGT00940000160356.k #10	ENSGT00940000162161.A #11	ENSGT00940000159142 #12	ENSGT00940000156523.b #13	ENSGT00390000008060 #14	ENSGT00940000161721 #15	ENSGT00940000157113 #16	ENSGT00940000161332 #17	ENSGT00940000162457	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00860000136011 #27	ENSGT00940000157017.b #28	ENSGT00940000160899 #29	ENSGT00390000000289 #30	ENSGT00940000161021 #31	ENSGT00390000013329	ENSGT00940000154355	ENSGT00940000161439	ENSGT00950000183110.b.a	ENSGT00390000013841	ENSGT00940000161913
Steppe mouse	MODERN SPECIES	3068	Odf3l2 (ENSMSIG00000001068) #7	Madcam1 (ENSMSIG00000001087) #8	Tpgs1 (ENSMSIG00000001133) #9	Cdc34 (ENSMSIG00000001145) #10	Gzmm (ENSMSIG00000001207) #11	Bsg (ENSMSIG00000001246) #12	Hcn2 (ENSMSIG00000001317) #13	Polrmt (ENSMSIG00000001360) #14	ENSMSIG00000001501 #15	Rnf126 (ENSMSIG00000001542) #16	Fstl3 (ENSMSIG00000001587) #17	Palm (ENSMSIG00000001627) #18	Misp (ENSMSIG00000001812) #19	Ptbp1 (ENSMSIG00000001876) #20	Plppr3 (ENSMSIG00000002017) #21	Prtn3 (ENSMSIG00000002097) #22	Elane (ENSMSIG00000002142) #23	Cfd (ENSMSIG00000002191) #24	Med16 (ENSMSIG00000002237) #25	R3hdm4 (ENSMSIG00000002357) #26	ENSMSIG00000002389 #27	Kiss1r (ENSMSIG00000002402) #28	Arid3a (ENSMSIG00000002468) #29	Wdr18 (ENSMSIG00000002527) #30	Grin3b (ENSMSIG00000002569) #31
spretus	MODERN SPECIES	1	Madcam1 (MGP_SPRETEiJ_G0016350) #8	Tpgs1 (MGP_SPRETEiJ_G0016351) #9	Cdc34 (MGP_SPRETEiJ_G0016352) #10	Gzmm (MGP_SPRETEiJ_G0016353) #11	Bsg (MGP_SPRETEiJ_G0016354) #12	Hcn2 (MGP_SPRETEiJ_G0016355) #13	Polrmt (MGP_SPRETEiJ_G0016356) #14	MGP_SPRETEiJ_G0016357 #15	Rnf126 (MGP_SPRETEiJ_G0016358) #16	Fstl3 (MGP_SPRETEiJ_G0016359) #17	Prss57 (MGP_SPRETEiJ_G0016360)	Palm (MGP_SPRETEiJ_G0016361) #18	Misp (MGP_SPRETEiJ_G0016362) #19	MGP_SPRETEiJ_G0016363	Plppr3 (MGP_SPRETEiJ_G0016364) #21	Prtn3 (MGP_SPRETEiJ_G0016365) #22	Elane (MGP_SPRETEiJ_G0016366) #23	Cfd (MGP_SPRETEiJ_G0016367) #24	Med16 (MGP_SPRETEiJ_G0016368) #25	R3hdm4 (MGP_SPRETEiJ_G0016369) #26	MGP_SPRETEiJ_G0016370 #27	Kiss1r (MGP_SPRETEiJ_G0016371) #28	Arid3a (MGP_SPRETEiJ_G0016372) #29	Wdr18 (MGP_SPRETEiJ_G0016373) #30	Grin3b (MGP_SPRETEiJ_G0016374) #31	Tmem259 (MGP_SPRETEiJ_G0016375)	Cnn2 (MGP_SPRETEiJ_G0016376)	Abca7 (MGP_SPRETEiJ_G0016377)	Arhgap45 (MGP_SPRETEiJ_G0016378)	Polr2e (MGP_SPRETEiJ_G0016379)	MGP_SPRETEiJ_G0016380
Mouse	MODERN SPECIES	1	Madcam1 (ENSMUSG00000020310) #8	Tpgs1 (ENSMUSG00000020308) #9	Cdc34 (ENSMUSG00000020307) #10	Gzmm (ENSMUSG00000054206) #11	Bsg (ENSMUSG00000023175) #12	Hcn2 (ENSMUSG00000020331) #13	Polrmt (ENSMUSG00000020329) #14	Fgf22 (ENSMUSG00000020327) #15	Rnf126 (ENSMUSG00000035890) #16	Fstl3 (ENSMUSG00000020325) #17	Prss57 (ENSMUSG00000020323)	Palm (ENSMUSG00000035863) #18	Misp (ENSMUSG00000035852) #19	Ptbp1 (ENSMUSG00000006498) #20	Plppr3 (ENSMUSG00000035835) #21	Prtn3 (ENSMUSG00000057729) #22	Elane (ENSMUSG00000020125) #23	Cfd (ENSMUSG00000061780) #24	Med16 (ENSMUSG00000013833) #25	R3hdm4 (ENSMUSG00000035781) #26	Kiss1r (ENSMUSG00000035773) #28	Arid3a (ENSMUSG00000019564) #29	Wdr18 (ENSMUSG00000035754) #30	Grin3b (ENSMUSG00000035745) #31	Tmem259 (ENSMUSG00000013858)	Cnn2 (ENSMUSG00000004665)	Abca7 (ENSMUSG00000035722)	Arhgap45 (ENSMUSG00000035697)	Polr2e (ENSMUSG00000004667)	Gpx4 (ENSMUSG00000075706)	Sbno2 (ENSMUSG00000035673)
Ryukyu mouse	MODERN SPECIES	1	Madcam1 (MGP_CAROLIEiJ_G0015532) #8	Tpgs1 (MGP_CAROLIEiJ_G0015533) #9	Cdc34 (MGP_CAROLIEiJ_G0015534) #10	MGP_CAROLIEiJ_G0015535 #11	Bsg (MGP_CAROLIEiJ_G0015536) #12	Hcn2 (MGP_CAROLIEiJ_G0015537) #13	Polrmt (MGP_CAROLIEiJ_G0015538) #14	MGP_CAROLIEiJ_G0015539 #15	Rnf126 (MGP_CAROLIEiJ_G0015540) #16	Fstl3 (MGP_CAROLIEiJ_G0015541) #17	Prss57 (MGP_CAROLIEiJ_G0015542)	Palm (MGP_CAROLIEiJ_G0015543) #18	Misp (MGP_CAROLIEiJ_G0015544) #19	Ptbp1 (MGP_CAROLIEiJ_G0015545) #20	Plppr3 (MGP_CAROLIEiJ_G0015546) #21	Prtn3 (MGP_CAROLIEiJ_G0015547) #22	Elane (MGP_CAROLIEiJ_G0015548) #23	Cfd (MGP_CAROLIEiJ_G0015549) #24	Med16 (MGP_CAROLIEiJ_G0015550) #25	R3hdm4 (MGP_CAROLIEiJ_G0015551) #26	MGP_CAROLIEiJ_G0015552 #27	Kiss1r (MGP_CAROLIEiJ_G0015553) #28	Arid3a (MGP_CAROLIEiJ_G0015554) #29	Wdr18 (MGP_CAROLIEiJ_G0015555) #30	Grin3b (MGP_CAROLIEiJ_G0015556) #31	Tmem259 (MGP_CAROLIEiJ_G0015557)	Cnn2 (MGP_CAROLIEiJ_G0015558)	Abca7 (MGP_CAROLIEiJ_G0015559)	Arhgap45 (MGP_CAROLIEiJ_G0015560)	Polr2e (MGP_CAROLIEiJ_G0015561)	Gpx4 (MGP_CAROLIEiJ_G0015562)
Shrew mouse	MODERN SPECIES	22	Madcam1 (MGP_PahariEiJ_G0030945) #8	Tpgs1 (MGP_PahariEiJ_G0030946) #9	MGP_PahariEiJ_G0030947 #10	Gzmm (MGP_PahariEiJ_G0030948) #11	Bsg (MGP_PahariEiJ_G0030949) #12	Hcn2 (MGP_PahariEiJ_G0030950) #13	Polrmt (MGP_PahariEiJ_G0030951) #14	MGP_PahariEiJ_G0030952 #15	Rnf126 (MGP_PahariEiJ_G0030953) #16	Fstl3 (MGP_PahariEiJ_G0030954) #17	Prss57 (MGP_PahariEiJ_G0030955)	Palm (MGP_PahariEiJ_G0030956) #18	Misp (MGP_PahariEiJ_G0030957) #19	Ptbp1 (MGP_PahariEiJ_G0030958) #20	Plppr3 (MGP_PahariEiJ_G0030959) #21	Prtn3 (MGP_PahariEiJ_G0030960) #22	Elane (MGP_PahariEiJ_G0030961) #23	Cfd (MGP_PahariEiJ_G0030962) #24	Med16 (MGP_PahariEiJ_G0030963) #25	R3hdm4 (MGP_PahariEiJ_G0030964) #26	MGP_PahariEiJ_G0030965	Kiss1r (MGP_PahariEiJ_G0030966) #28	Arid3a (MGP_PahariEiJ_G0030967) #29	Wdr18 (MGP_PahariEiJ_G0030968) #30	Grin3b (MGP_PahariEiJ_G0030969) #31	Tmem259 (MGP_PahariEiJ_G0030970)	Cnn2 (MGP_PahariEiJ_G0030971)	Abca7 (MGP_PahariEiJ_G0030972)	Arhgap45 (MGP_PahariEiJ_G0030973)	Polr2e (MGP_PahariEiJ_G0030974)	Gpx4 (MGP_PahariEiJ_G0030975)
Rat	MODERN SPECIES	17	Tpgs1 (ENSRNOG00000008296) #9	Cdc34 (ENSRNOG00000060530) #10	Gzmm (ENSRNOG00000030530) #11	Bsg (ENSRNOG00000008414) #12	Hcn2 (ENSRNOG00000008831) #13	Polrmt (ENSRNOG00000024879) #14	Fgf22 (ENSRNOG00000008960) #15	Rnf126 (ENSRNOG00000009028) #16	Fstl3 (ENSRNOG00000009311) #17	Prss57 (ENSRNOG00000025293)	Palm (ENSRNOG00000009760) #18	Misp (ENSRNOG00000010423) #19	Ptbp1 (ENSRNOG00000010448) ##20	ENSRNOG00000069136	Plppr3 (ENSRNOG00000027940) #21	Prtn3 (ENSRNOG00000029814) #22	Elane (ENSRNOG00000033685) #23	Cfd (ENSRNOG00000033564) #24	Med16 (ENSRNOG00000011315) #25	R3hdm4 (ENSRNOG00000011489) #26	Kiss1r (ENSRNOG00000011954) #28	Arid3a (ENSRNOG00000026435) #29	Wdr18 (ENSRNOG00000012379) #30	Grin3b (ENSRNOG00000012562) #31	Tmem259 (ENSRNOG00000012808)	Cnn2 (ENSRNOG00000043044)	Abca7 (ENSRNOG00000012939)	Arhgap45 (ENSRNOG00000013220)	Polr2e (ENSRNOG00000013545)	Gpx4 (ENSRNOG00000013604)	Sbno2 (ENSRNOG00000013987)