Murinae	ANCESTRAL SPECIES	25	ENSGT00510000049549 #7	ENSGT00500000045074 #8	ENSGT00940000160356 #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #27	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913 #36	ENSGT00940000159946 #37
Mus	ANCESTRAL SPECIES	15	ENSGT00510000049549 #7	ENSGT00500000045074 #8	ENSGT00940000160356 #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #27	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913 #36	ENSGT00940000159946 #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00510000049549 #7	ENSGT00500000045074 #8	ENSGT00940000160356.k #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #27	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913 #36	ENSGT00940000159946 #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00510000049549 #7	ENSGT00500000045074 #8	ENSGT00940000160356.k #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #27	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913 #36	ENSGT00940000159946 #37
Mouse	MODERN SPECIES	1	Madcam1 (ENSMUSG00000020310) #7	Tpgs1 (ENSMUSG00000020308) #8	Cdc34 (ENSMUSG00000020307) #9	Gzmm (ENSMUSG00000054206) #10	Bsg (ENSMUSG00000023175) #11	Hcn2 (ENSMUSG00000020331) #12	Polrmt (ENSMUSG00000020329) #13	Fgf22 (ENSMUSG00000020327) #14	Rnf126 (ENSMUSG00000035890) #15	Fstl3 (ENSMUSG00000020325) #16	Prss57 (ENSMUSG00000020323) #17	Palm (ENSMUSG00000035863) #18	Misp (ENSMUSG00000035852) #19	Ptbp1 (ENSMUSG00000006498) #20	Plppr3 (ENSMUSG00000035835) #21	Prtn3 (ENSMUSG00000057729) #22	Elane (ENSMUSG00000020125) #23	Cfd (ENSMUSG00000061780) #24	Med16 (ENSMUSG00000013833) #25	R3hdm4 (ENSMUSG00000035781) #26	Kiss1r (ENSMUSG00000035773) #27	Arid3a (ENSMUSG00000019564) #28	Wdr18 (ENSMUSG00000035754) #29	Grin3b (ENSMUSG00000035745) #30	Tmem259 (ENSMUSG00000013858) #31	Cnn2 (ENSMUSG00000004665) #32	Abca7 (ENSMUSG00000035722) #33	Arhgap45 (ENSMUSG00000035697) #34	Polr2e (ENSMUSG00000004667) #35	Gpx4 (ENSMUSG00000075706) #36	Sbno2 (ENSMUSG00000035673) #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT00510000049549 #7	ENSGT00500000045074 #8	ENSGT00940000160356.k #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.e.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00860000136011	ENSGT00940000157017.b #27	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913 #36
Steppe mouse	MODERN SPECIES	3068	Odf3l2 (ENSMSIG00000001068)	Madcam1 (ENSMSIG00000001087) #7	Tpgs1 (ENSMSIG00000001133) #8	Cdc34 (ENSMSIG00000001145) #9	Gzmm (ENSMSIG00000001207) #10	Bsg (ENSMSIG00000001246) #11	Hcn2 (ENSMSIG00000001317) #12	Polrmt (ENSMSIG00000001360) #13	ENSMSIG00000001501 #14	Rnf126 (ENSMSIG00000001542) #15	Fstl3 (ENSMSIG00000001587) #16	Palm (ENSMSIG00000001627) #18	Misp (ENSMSIG00000001812) #19	Ptbp1 (ENSMSIG00000001876) #20	Plppr3 (ENSMSIG00000002017) #21	Prtn3 (ENSMSIG00000002097) #22	Elane (ENSMSIG00000002142) #23	Cfd (ENSMSIG00000002191) #24	Med16 (ENSMSIG00000002237) #25	R3hdm4 (ENSMSIG00000002357) #26	ENSMSIG00000002389	Kiss1r (ENSMSIG00000002402) #27	Arid3a (ENSMSIG00000002468) #28	Wdr18 (ENSMSIG00000002527) #29	Grin3b (ENSMSIG00000002569) #30
spretus	MODERN SPECIES	1	Madcam1 (MGP_SPRETEiJ_G0016350) #7	Tpgs1 (MGP_SPRETEiJ_G0016351) #8	Cdc34 (MGP_SPRETEiJ_G0016352) #9	Gzmm (MGP_SPRETEiJ_G0016353) #10	Bsg (MGP_SPRETEiJ_G0016354) #11	Hcn2 (MGP_SPRETEiJ_G0016355) #12	Polrmt (MGP_SPRETEiJ_G0016356) #13	MGP_SPRETEiJ_G0016357 #14	Rnf126 (MGP_SPRETEiJ_G0016358) #15	Fstl3 (MGP_SPRETEiJ_G0016359) #16	Prss57 (MGP_SPRETEiJ_G0016360) #17	Palm (MGP_SPRETEiJ_G0016361) #18	Misp (MGP_SPRETEiJ_G0016362) #19	MGP_SPRETEiJ_G0016363	Plppr3 (MGP_SPRETEiJ_G0016364) #21	Prtn3 (MGP_SPRETEiJ_G0016365) #22	Elane (MGP_SPRETEiJ_G0016366) #23	Cfd (MGP_SPRETEiJ_G0016367) #24	Med16 (MGP_SPRETEiJ_G0016368) #25	R3hdm4 (MGP_SPRETEiJ_G0016369) #26	MGP_SPRETEiJ_G0016370	Kiss1r (MGP_SPRETEiJ_G0016371) #27	Arid3a (MGP_SPRETEiJ_G0016372) #28	Wdr18 (MGP_SPRETEiJ_G0016373) #29	Grin3b (MGP_SPRETEiJ_G0016374) #30	Tmem259 (MGP_SPRETEiJ_G0016375) #31	Cnn2 (MGP_SPRETEiJ_G0016376) #32	Abca7 (MGP_SPRETEiJ_G0016377) #33	Arhgap45 (MGP_SPRETEiJ_G0016378) #34	Polr2e (MGP_SPRETEiJ_G0016379) #35	MGP_SPRETEiJ_G0016380
Ryukyu mouse	MODERN SPECIES	1	Madcam1 (MGP_CAROLIEiJ_G0015532) #7	Tpgs1 (MGP_CAROLIEiJ_G0015533) #8	Cdc34 (MGP_CAROLIEiJ_G0015534) #9	MGP_CAROLIEiJ_G0015535 #10	Bsg (MGP_CAROLIEiJ_G0015536) #11	Hcn2 (MGP_CAROLIEiJ_G0015537) #12	Polrmt (MGP_CAROLIEiJ_G0015538) #13	MGP_CAROLIEiJ_G0015539 #14	Rnf126 (MGP_CAROLIEiJ_G0015540) #15	Fstl3 (MGP_CAROLIEiJ_G0015541) #16	Prss57 (MGP_CAROLIEiJ_G0015542) #17	Palm (MGP_CAROLIEiJ_G0015543) #18	Misp (MGP_CAROLIEiJ_G0015544) #19	Ptbp1 (MGP_CAROLIEiJ_G0015545) #20	Plppr3 (MGP_CAROLIEiJ_G0015546) #21	Prtn3 (MGP_CAROLIEiJ_G0015547) #22	Elane (MGP_CAROLIEiJ_G0015548) #23	Cfd (MGP_CAROLIEiJ_G0015549) #24	Med16 (MGP_CAROLIEiJ_G0015550) #25	R3hdm4 (MGP_CAROLIEiJ_G0015551) #26	MGP_CAROLIEiJ_G0015552	Kiss1r (MGP_CAROLIEiJ_G0015553) #27	Arid3a (MGP_CAROLIEiJ_G0015554) #28	Wdr18 (MGP_CAROLIEiJ_G0015555) #29	Grin3b (MGP_CAROLIEiJ_G0015556) #30	Tmem259 (MGP_CAROLIEiJ_G0015557) #31	Cnn2 (MGP_CAROLIEiJ_G0015558) #32	Abca7 (MGP_CAROLIEiJ_G0015559) #33	Arhgap45 (MGP_CAROLIEiJ_G0015560) #34	Polr2e (MGP_CAROLIEiJ_G0015561) #35	Gpx4 (MGP_CAROLIEiJ_G0015562) #36
Shrew mouse	MODERN SPECIES	22	Madcam1 (MGP_PahariEiJ_G0030945) #7	Tpgs1 (MGP_PahariEiJ_G0030946) #8	MGP_PahariEiJ_G0030947 #9	Gzmm (MGP_PahariEiJ_G0030948) #10	Bsg (MGP_PahariEiJ_G0030949) #11	Hcn2 (MGP_PahariEiJ_G0030950) #12	Polrmt (MGP_PahariEiJ_G0030951) #13	MGP_PahariEiJ_G0030952 #14	Rnf126 (MGP_PahariEiJ_G0030953) #15	Fstl3 (MGP_PahariEiJ_G0030954) #16	Prss57 (MGP_PahariEiJ_G0030955) #17	Palm (MGP_PahariEiJ_G0030956) #18	Misp (MGP_PahariEiJ_G0030957) #19	Ptbp1 (MGP_PahariEiJ_G0030958) #20	Plppr3 (MGP_PahariEiJ_G0030959) #21	Prtn3 (MGP_PahariEiJ_G0030960) #22	Elane (MGP_PahariEiJ_G0030961) #23	Cfd (MGP_PahariEiJ_G0030962) #24	Med16 (MGP_PahariEiJ_G0030963) #25	R3hdm4 (MGP_PahariEiJ_G0030964) #26	MGP_PahariEiJ_G0030965	Kiss1r (MGP_PahariEiJ_G0030966) #27	Arid3a (MGP_PahariEiJ_G0030967) #28	Wdr18 (MGP_PahariEiJ_G0030968) #29	Grin3b (MGP_PahariEiJ_G0030969) #30	Tmem259 (MGP_PahariEiJ_G0030970) #31	Cnn2 (MGP_PahariEiJ_G0030971) #32	Abca7 (MGP_PahariEiJ_G0030972) #33	Arhgap45 (MGP_PahariEiJ_G0030973) #34	Polr2e (MGP_PahariEiJ_G0030974) #35	Gpx4 (MGP_PahariEiJ_G0030975) #36
Rat	MODERN SPECIES	17	Tpgs1 (ENSRNOG00000008296) #8	Cdc34 (ENSRNOG00000060530) #9	Gzmm (ENSRNOG00000030530) #10	Bsg (ENSRNOG00000008414) #11	Hcn2 (ENSRNOG00000008831) #12	Polrmt (ENSRNOG00000024879) #13	Fgf22 (ENSRNOG00000008960) #14	Rnf126 (ENSRNOG00000009028) #15	Fstl3 (ENSRNOG00000009311) #16	Prss57 (ENSRNOG00000025293) #17	Palm (ENSRNOG00000009760) #18	Misp (ENSRNOG00000010423) #19	Ptbp1 (ENSRNOG00000010448) ##20	ENSRNOG00000069136	Plppr3 (ENSRNOG00000027940) #21	Prtn3 (ENSRNOG00000029814) #22	Elane (ENSRNOG00000033685) #23	Cfd (ENSRNOG00000033564) #24	Med16 (ENSRNOG00000011315) #25	R3hdm4 (ENSRNOG00000011489) #26	Kiss1r (ENSRNOG00000011954) #27	Arid3a (ENSRNOG00000026435) #28	Wdr18 (ENSRNOG00000012379) #29	Grin3b (ENSRNOG00000012562) #30	Tmem259 (ENSRNOG00000012808) #31	Cnn2 (ENSRNOG00000043044) #32	Abca7 (ENSRNOG00000012939) #33	Arhgap45 (ENSRNOG00000013220) #34	Polr2e (ENSRNOG00000013545) #35	Gpx4 (ENSRNOG00000013604) #36	Sbno2 (ENSRNOG00000013987) #37