Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00500000045074 #8	ENSGT00940000160356 #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234551.k.d.a.c	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #27	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913	ENSGT00940000159946 #36
Chiroptera	ANCESTRAL SPECIES	73	ENSGT00500000045074 #8	ENSGT00940000160356 #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234551.k.d.a.c	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #27	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913	ENSGT00940000159946 #36
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00500000045074 #8	ENSGT00940000160356 #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b #20	ENSGT00940000160280 #21	ENSGT01030000234551.k.d.a.c	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000157017.b #27	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913	ENSGT00940000159946 #36
Microbat	MODERN SPECIES	1320	ENSMLUG00000012734 #7	TPGS1 (ENSMLUG00000012740) #8	CDC34 (ENSMLUG00000002253) #9	GZMM (ENSMLUG00000009146) #10	ENSMLUG00000009184 #11	HCN2 (ENSMLUG00000009201) #12	POLRMT (ENSMLUG00000009223) #13	FGF22 (ENSMLUG00000017499) #14	RNF126 (ENSMLUG00000017501) #15	FSTL3 (ENSMLUG00000012356) #16	PRSS57 (ENSMLUG00000017503) #17	PALM (ENSMLUG00000017505) #18	MISP (ENSMLUG00000017506) #19	ENSMLUG00000003320 #20	PLPPR3 (ENSMLUG00000003312) #21	PRTN3 (ENSMLUG00000005527) #22	ELANE (ENSMLUG00000010616) #23	CFD (ENSMLUG00000003311) #24	MED16 (ENSMLUG00000011647) #25	R3HDM4 (ENSMLUG00000023914) #26	KISS1R (ENSMLUG00000011666) #27	ARID3A (ENSMLUG00000011678) #28	WDR18 (ENSMLUG00000011688) #29	GRIN3B (ENSMLUG00000011706) #30	TMEM259 (ENSMLUG00000011743) #31	CNN2 (ENSMLUG00000013160) #32	ABCA7 (ENSMLUG00000013163) #33	ARHGAP45 (ENSMLUG00000023668) #34	POLR2E (ENSMLUG00000013193) #35	SBNO2 (ENSMLUG00000003269) #36	ENSMLUG00000026572 #37
Greater horseshoe bat	MODERN SPECIES	9	MADCAM1 (ENSRFEG00010005493) #7	TPGS1 (ENSRFEG00010005471) #8	CDC34 (ENSRFEG00010005455) #9	GZMM (ENSRFEG00010005437) #10	ENSRFEG00010005400 #11	HCN2 (ENSRFEG00010005372) #12	POLRMT (ENSRFEG00010017846) #13	FGF22 (ENSRFEG00010017743) #14	RNF126 (ENSRFEG00010017714) #15	FSTL3 (ENSRFEG00010017668) #16	PALM (ENSRFEG00010017597) #18	MISP (ENSRFEG00010017503) #19	ENSRFEG00010016950 #20	PLPPR3 (ENSRFEG00010016906) #21	ENSRFEG00010016825	PRTN3 (ENSRFEG00010016699) #22	ELANE (ENSRFEG00010016636) #23	CFD (ENSRFEG00010016546) #24	MED16 (ENSRFEG00010016516) #25	R3HDM4 (ENSRFEG00010016464) #26	ENSRFEG00010016296	ARID3A (ENSRFEG00010016232) #28	WDR18 (ENSRFEG00010016142) #29	GRIN3B (ENSRFEG00010015827) #30	TMEM259 (ENSRFEG00010015639) #31	CNN2 (ENSRFEG00010015518) #32	ARHGAP45 (ENSRFEG00010014102) #34	POLR2E (ENSRFEG00010013978) #35	GPX4 (ENSRFEG00010013719)	SBNO2 (ENSRFEG00010013566) #36	GAMT (ENSRFEG00010013390)
Megabat	MODERN SPECIES	3018																PRTN3 (ENSPVAG00000005846) #22	ELANE (ENSPVAG00000005848) #23	CFD (ENSPVAG00000005849) #24
Equus	ANCESTRAL SPECIES	34	ENSGT00500000045074 #8	ENSGT00940000160356 #9	ENSGT00940000162161.A #10	ENSGT00940000159142 #11	ENSGT00940000156523.b #12	ENSGT00390000008060 #13	ENSGT00940000161721 #14	ENSGT00940000157113 #15	ENSGT00940000161332 #16	ENSGT00940000162457 #17	ENSGT00940000160580 #18	ENSGT00940000154739.B #19	ENSGT01050000244924.a.a.b.db #20	ENSGT00940000160280 #21	ENSGT01030000234551.k.d.a.c	ENSGT01030000234528.C.c.b #22	ENSGT01030000234528.C.c.a #23	ENSGT00940000162255 #24	ENSGT00390000003821 #25	ENSGT00390000015467 #26	ENSGT00940000160899 #28	ENSGT00390000000289 #29	ENSGT00940000161021 #30	ENSGT00390000013329 #31	ENSGT00940000154355 #32	ENSGT00940000161439 #33	ENSGT00950000183110.b.a #34	ENSGT00390000013841 #35	ENSGT00940000161913	ENSGT00940000159946 #36	ENSGT00940000158050
Horse	MODERN SPECIES	28	TPGS1 (ENSECAG00000003591) #8	CDC34 (ENSECAG00000032804) #9	BSG (ENSECAG00000012389) #11	HCN2 (ENSECAG00000039849) #12	POLRMT (ENSECAG00000032711) #13	FGF22 (ENSECAG00000039463) #14	RNF126 (ENSECAG00000026845) #15	FSTL3 (ENSECAG00000003580) #16	PRSS57 (ENSECAG00000034904) #17	ENSECAG00000033590 #17	PALM (ENSECAG00000035522) #18	MISP (ENSECAG00000029475) #19	PLPPR3 (ENSECAG00000006905) #21	PTBP1 (ENSECAG00000018845) #20	AZU1 (ENSECAG00000040617)	PRTN3 (ENSECAG00000040021) #22	CFD (ENSECAG00000036123) #24	MED16 (ENSECAG00000021059) #25	R3HDM4 (ENSECAG00000000003) #26	ENSECAG00000031157	ARID3A (ENSECAG00000011779) #28	WDR18 (ENSECAG00000038916) #29	GRIN3B (ENSECAG00000028369) #30	TMEM259 (ENSECAG00000032898) #31	CNN2 (ENSECAG00000032097) #32	ABCA7 (ENSECAG00000035691) #33	ARHGAP45 (ENSECAG00000010977) #34	POLR2E (ENSECAG00000011124) #35	GPX4 (ENSECAG00000035469)	SBNO2 (ENSECAG00000011827) #36	ENSECAG00000053926
Donkey	MODERN SPECIES	12	TPGS1 (ENSEASG00005025663) #8	GZMM (ENSEASG00005021481) #10	ENSEASG00005021483 #11	HCN2 (ENSEASG00005021486) #12	POLRMT (ENSEASG00005021493) #13	FGF22 (ENSEASG00005031414) #14	RNF126 (ENSEASG00005021501) #15	ENSEASG00005021506 #16	PRSS57 (ENSEASG00005021509) #17	ENSEASG00005033591 #17	PALM (ENSEASG00005027243) #18	MISP (ENSEASG00005021522) #19	ENSEASG00005021525 #20	PLPPR3 (ENSEASG00005038749) #21	AZU1 (ENSEASG00005021539)	PRTN3 (ENSEASG00005021545) #22	ELANE (ENSEASG00005021547) #23	ENSEASG00005028099 #24	MED16 (ENSEASG00005021554) #25	R3HDM4 (ENSEASG00005021556) #26	ENSEASG00005025957	ARID3A (ENSEASG00005021561) #28	WDR18 (ENSEASG00005021566) #29	GRIN3B (ENSEASG00005021569) #30	TMEM259 (ENSEASG00005021573) #31	CNN2 (ENSEASG00005021575) #32	ARHGAP45 (ENSEASG00005021605) #34	ENSEASG00005033331 #35	GPX4 (ENSEASG00005029791)	SBNO2 (ENSEASG00005021621) #36	STK11 (ENSEASG00005021634)