Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT01020000230616	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000162777	ENSGT00940000156551
Primates	ANCESTRAL SPECIES	6	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000162777	ENSGT00940000156551
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Simiiformes	ANCESTRAL SPECIES	27	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Catarrhini	ANCESTRAL SPECIES	22	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Cercopithecidae	ANCESTRAL SPECIES	24	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00910000146845.b.b
Rhinopithecus	ANCESTRAL SPECIES	185	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00910000146845.b.b
Black snub-nosed monkey	MODERN SPECIES	895	ENSRBIG00000032441 #7	PANX2 (ENSRBIG00000027031) #8	TRABD (ENSRBIG00000044913) #9	SELENOO (ENSRBIG00000033660) #10	TUBGCP6 (ENSRBIG00000021319) #11	HDAC10 (ENSRBIG00000035382) #12	MAPK12 (ENSRBIG00000028039) #13	MAPK11 (ENSRBIG00000040923) #14	PLXNB2 (ENSRBIG00000029520) #15	DENND6B (ENSRBIG00000031097) #16	PPP6R2 (ENSRBIG00000030059) #17	SBF1 (ENSRBIG00000044863) #18	ADM2 (ENSRBIG00000032807) #19	MIOX (ENSRBIG00000039287) #20	LMF2 (ENSRBIG00000032866) #21	NCAPH2 (ENSRBIG00000042809) #22	TYMP (ENSRBIG00000037217) #23	SYCE3 (ENSRBIG00000039291) #24	CPT1B (ENSRBIG00000028289) #25	TNS3 (ENSRBIG00000027926) #26	ENSRBIG00000037751 #27
Golden snub-nosed monkey	MODERN SPECIES	788											PPP6R2 (ENSRROG00000022707) #17	SBF1 (ENSRROG00000029875) #18	ADM2 (ENSRROG00000042554) #19	MIOX (ENSRROG00000035524) #20	LMF2 (ENSRROG00000026855) #21	NCAPH2 (ENSRROG00000022225) #22	TYMP (ENSRROG00000035785) #23	ODF3B (ENSRROG00000032855)	SYCE3 (ENSRROG00000044463) #24	CPT1B (ENSRROG00000030043) #25	CHKB (ENSRROG00000043157)	ENSRROG00000033770	ARSA (ENSRROG00000024121)	SHANK3 (ENSRROG00000033281)	ACR (ENSRROG00000030231)	ENSRROG00000031130	ENSRROG00000030015	ENSRROG00000037502
Cercopithecinae	ANCESTRAL SPECIES	21	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00910000146845.b.b
Cercopithecinae_a	ANCESTRAL SPECIES	20	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551.j.b	ENSGT00910000146845.b.b
Macaca	ANCESTRAL SPECIES	20	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551.j.a
Macaca_a	ANCESTRAL SPECIES	20	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551.j.a
Rhesus	MODERN SPECIES	1	MLC1 (ENSMMUG00000009119)	MOV10L1 (ENSMMUG00000009120) #7	PANX2 (ENSMMUG00000011023) #8	TRABD (ENSMMUG00000014087) #9	SELENOO (ENSMMUG00000014098) #10	TUBGCP6 (ENSMMUG00000014100) #11	HDAC10 (ENSMMUG00000014101) #12	MAPK12 (ENSMMUG00000014106) #13	MAPK11 (ENSMMUG00000014107) #14	PLXNB2 (ENSMMUG00000008331) #15	DENND6B (ENSMMUG00000008327) #16	PPP6R2 (ENSMMUG00000009075) #17	SBF1 (ENSMMUG00000009082) #18	ADM2 (ENSMMUG00000062822) #19	MIOX (ENSMMUG00000009088) #20	NCAPH2 (ENSMMUG00000001763) #22	ENSMMUG00000001764 #23	ODF3B (ENSMMUG00000039452)	SYCE3 (ENSMMUG00000058930) #24	CPT1B (ENSMMUG00000003121) #25	CHKB (ENSMMUG00000057498)	MAPK8IP2 (ENSMMUG00000064486)	ARSA (ENSMMUG00000016274)	ENSMMUG00000055403	SHANK3 (ENSMMUG00000005588)	ACR (ENSMMUG00000005592)	RABL2B (ENSMMUG00000022914)
Crab-eating macaque	MODERN SPECIES	1	ENSMFAG00000064283	MLC1 (ENSMFAG00000024753)	MOV10L1 (ENSMFAG00000035651) #7	ENSMFAG00000065187 #8	TRABD (ENSMFAG00000038729) #9	SELENOO (ENSMFAG00000000242) #10	HDAC10 (ENSMFAG00000033885) #12	MAPK12 (ENSMFAG00000034798) #13	MAPK11 (ENSMFAG00000002644) #14	PLXNB2 (ENSMFAG00000035984) #15	DENND6B (ENSMFAG00000033956) #16	PPP6R2 (ENSMFAG00000002797) #17	ADM2 (ENSMFAG00000055878) #19	MIOX (ENSMFAG00000033234) #20	LMF2 (ENSMFAG00000031482) #21	NCAPH2 (ENSMFAG00000033329) #22	ENSMFAG00000063947	SCO2 (ENSMFAG00000055882)	TYMP (ENSMFAG00000045728) #23	ENSMFAG00000002276	SYCE3 (ENSMFAG00000036358) #24	CPT1B (ENSMFAG00000023471) #25	CHKB (ENSMFAG00000043916)	ENSMFAG00000049162	ENSMFAG00000001692	ARSA (ENSMFAG00000041434)	ACR (ENSMFAG00000034551)	ENSMFAG00000044775	ENSMFAG00000064904
Pig-tailed macaque	MODERN SPECIES	159	PANX2 (ENSMNEG00000020460) #8	TRABD (ENSMNEG00000037847) #9	SELENOO (ENSMNEG00000035644) #10	TUBGCP6 (ENSMNEG00000031575) #11	HDAC10 (ENSMNEG00000033636) #12	MAPK12 (ENSMNEG00000042652) #13	MAPK11 (ENSMNEG00000030261) #14	PLXNB2 (ENSMNEG00000042020) #15	ENSMNEG00000043368	DENND6B (ENSMNEG00000042766) #16	PPP6R2 (ENSMNEG00000031696) #17	SBF1 (ENSMNEG00000043017) #18	ADM2 (ENSMNEG00000030356) #19	MIOX (ENSMNEG00000044698) #20	LMF2 (ENSMNEG00000042502) #21	NCAPH2 (ENSMNEG00000032019) #22	TYMP (ENSMNEG00000045043) #23	ODF3B (ENSMNEG00000035009)	SYCE3 (ENSMNEG00000040516) #24	CPT1B (ENSMNEG00000038572) #25	CHKB (ENSMNEG00000022712)	MAPK8IP2 (ENSMNEG00000040573)	ARSA (ENSMNEG00000027947)	SHANK3 (ENSMNEG00000002141)	ACR (ENSMNEG00000030295)	ENSMNEG00000028460
Cercopithecinae_b	ANCESTRAL SPECIES	22	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551.j.b	ENSGT00910000146845.b.b.b
Olive baboon	MODERN SPECIES	7	MLC1 (ENSPANG00000031954)	MOV10L1 (ENSPANG00000006819) #7	PANX2 (ENSPANG00000017413) #8	TRABD (ENSPANG00000016596) #9	SELENOO (ENSPANG00000023976) #10	HDAC10 (ENSPANG00000000914) #12	MAPK12 (ENSPANG00000016972) #13	MAPK11 (ENSPANG00000049404) #14	PLXNB2 (ENSPANG00000015749) #15	DENND6B (ENSPANG00000017018) #16	PPP6R2 (ENSPANG00000006416) #17	SBF1 (ENSPANG00000006415) #18	ADM2 (ENSPANG00000022244) #19	MIOX (ENSPANG00000019957) #20	LMF2 (ENSPANG00000017594) #21	NCAPH2 (ENSPANG00000017014) #22	ENSPANG00000006414 #23	ENSPANG00000044548	KLHDC7B (ENSPANG00000044794)	SYCE3 (ENSPANG00000039087) #24	CPT1B (ENSPANG00000015105) #25	CHKB (ENSPANG00000008683)	MAPK8IP2 (ENSPANG00000007364)	ARSA (ENSPANG00000000862)	ENSPANG00000036121	ENSPANG00000023575
Cercopithecinae_d	ANCESTRAL SPECIES	87	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551.j.b	ENSGT00910000146845.b.b.b
Sooty mangabey	MODERN SPECIES	662	PANX2 (ENSCATG00000042207) #8	TRABD (ENSCATG00000032558) #9	SELENOO (ENSCATG00000041757) #10	TUBGCP6 (ENSCATG00000035873) #11	HDAC10 (ENSCATG00000027781) #12	MAPK12 (ENSCATG00000034080) #13	MAPK11 (ENSCATG00000029109) #14	PLXNB2 (ENSCATG00000030111) #15	ENSCATG00000012909	DENND6B (ENSCATG00000037768) #16	PPP6R2 (ENSCATG00000030207) #17	SBF1 (ENSCATG00000039045) #18	ADM2 (ENSCATG00000021825) #19	MIOX (ENSCATG00000029162) #20	LMF2 (ENSCATG00000032122) #21	NCAPH2 (ENSCATG00000035036) #22	TYMP (ENSCATG00000013170) #23	ODF3B (ENSCATG00000036014)	SYCE3 (ENSCATG00000038279) #24	CPT1B (ENSCATG00000035816) #25	CHKB (ENSCATG00000043840)	MAPK8IP2 (ENSCATG00000043349)	ARSA (ENSCATG00000036686)	SHANK3 (ENSCATG00000021249)	ACR (ENSCATG00000043879)	ENSCATG00000034307
Drill	MODERN SPECIES	927	MOV10L1 (ENSMLEG00000009215) #7	TRABD (ENSMLEG00000041596) #9	SELENOO (ENSMLEG00000041146) #10	ENSMLEG00000037837	TUBGCP6 (ENSMLEG00000030659) #11	MAPK12 (ENSMLEG00000037798) #13	MAPK11 (ENSMLEG00000035794) #14	PLXNB2 (ENSMLEG00000034672) #15	ENSMLEG00000025789	DENND6B (ENSMLEG00000031026) #16	PPP6R2 (ENSMLEG00000041697) #17	SBF1 (ENSMLEG00000041820) #18	ADM2 (ENSMLEG00000035411) #19	MIOX (ENSMLEG00000038020) #20	LMF2 (ENSMLEG00000039388) #21	NCAPH2 (ENSMLEG00000032326) #22	ODF3B (ENSMLEG00000035563)	SYCE3 (ENSMLEG00000035228) #24	CPT1B (ENSMLEG00000037510) #25	CHKB (ENSMLEG00000041075)	MAPK8IP2 (ENSMLEG00000009596)	ARSA (ENSMLEG00000004967)	ENSMLEG00000033361	ACR (ENSMLEG00000041861)	ENSMLEG00000032621	ENSMLEG00000042131
Vervet Monkey	MODERN SPECIES	10	PANX2 (ENSCSAG00000005036) #8	TRABD (ENSCSAG00000005032) #9	SELENOO (ENSCSAG00000005028) #10	TUBGCP6 (ENSCSAG00000005024) #11	HDAC10 (ENSCSAG00000005004) #12	MAPK12 (ENSCSAG00000004951) #13	MAPK11 (ENSCSAG00000004931) #14	PLXNB2 (ENSCSAG00000004926) #15	ENSCSAG00000019289	DENND6B (ENSCSAG00000004892) #16	PPP6R2 (ENSCSAG00000004875) #17	SBF1 (ENSCSAG00000004869) #18	ADM2 (ENSCSAG00000004864) #19	MIOX (ENSCSAG00000004861) #20	LMF2 (ENSCSAG00000004848) #21	NCAPH2 (ENSCSAG00000004824) #22	SCO2 (ENSCSAG00000019290)	TYMP (ENSCSAG00000004810) #23	ODF3B (ENSCSAG00000004805)	ENSCSAG00000019291	SYCE3 (ENSCSAG00000004798) #24	CPT1B (ENSCSAG00000004797) #25	CHKB (ENSCSAG00000004793)	MAPK8IP2 (ENSCSAG00000004785)	ARSA (ENSCSAG00000004780)	SHANK3 (ENSCSAG00000004769)	ENSCSAG00000004708	ENSCSAG00000004704	ENSCSAG00000004698
Hominoidea	ANCESTRAL SPECIES	22	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00910000148076	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Hominidae	ANCESTRAL SPECIES	21	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00910000148076	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b.y	ENSGT00940000162430	ENSGT00940000156551
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	21	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00910000148076	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b.y	ENSGT00940000162430	ENSGT00940000156551.h
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00910000148076	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b.y	ENSGT00940000162430	ENSGT00940000156551.h
Pan	ANCESTRAL SPECIES	23	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00910000147363	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263.u #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00910000148076	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b.y	ENSGT00940000162430
Chimpanzee	MODERN SPECIES	13	PANX2 (ENSPTRG00000014529) #8	TRABD (ENSPTRG00000014530) #9	SELENOO (ENSPTRG00000029395) #10	TUBGCP6 (ENSPTRG00000014532) #11	HDAC10 (ENSPTRG00000014534) #12	MAPK12 (ENSPTRG00000014535) #13	MAPK11 (ENSPTRG00000050982) #14	PLXNB2 (ENSPTRG00000047925) #15	ENSPTRG00000050594	DENND6B (ENSPTRG00000043092) #16	PPP6R2 (ENSPTRG00000014540) #17	SBF1 (ENSPTRG00000014541) #18	ADM2 (ENSPTRG00000049409) #19	MIOX (ENSPTRG00000014543) #20	LMF2 (ENSPTRG00000045690) #21	NCAPH2 (ENSPTRG00000014545) #22	SCO2 (ENSPTRG00000014546)	ENSPTRG00000052343	TYMP (ENSPTRG00000014547) #23	ODF3B (ENSPTRG00000034356)	KLHDC7B (ENSPTRG00000029392)	SYCE3 (ENSPTRG00000033708) #24	CPT1B (ENSPTRG00000014548) #25	CHKB (ENSPTRG00000029391)	MAPK8IP2 (ENSPTRG00000014549)	ARSA (ENSPTRG00000014550)	SHANK3 (ENSPTRG00000014553)	ACR (ENSPTRG00000014554)	ENSPTRG00000029388	ENSPTRG00000048437
Bonobo	MODERN SPECIES	13	MOV10L1 (ENSPPAG00000029459) #7	PANX2 (ENSPPAG00000035037) #8	TRABD (ENSPPAG00000036776) #9	ENSPPAG00000027121 #10	TUBGCP6 (ENSPPAG00000028572) #11	HDAC10 (ENSPPAG00000041270) #12	MAPK12 (ENSPPAG00000029760) #13	MAPK11 (ENSPPAG00000036061) #14	PLXNB2 (ENSPPAG00000042446) #15	DENND6B (ENSPPAG00000032597) #16	PPP6R2 (ENSPPAG00000029750) #17	SBF1 (ENSPPAG00000040949) #18	ADM2 (ENSPPAG00000037772) #19	MIOX (ENSPPAG00000039164) #20	LMF2 (ENSPPAG00000033872) #21	NCAPH2 (ENSPPAG00000042287) #22	SCO2 (ENSPPAG00000007022)	ENSPPAG00000037131 #23	ODF3B (ENSPPAG00000038370)	ENSPPAG00000002186	SYCE3 (ENSPPAG00000038165) #24	CPT1B (ENSPPAG00000023865) #25	CHKB (ENSPPAG00000027692)	MAPK8IP2 (ENSPPAG00000029752)	ARSA (ENSPPAG00000017796)	ENSPPAG00000027489	ACR (ENSPPAG00000027679)	ENSPPAG00000028590
Human	MODERN SPECIES	14	MOV10L1 (ENSG00000073146) #7	PANX2 (ENSG00000073150) #8	TRABD (ENSG00000170638) #9	SELENOO (ENSG00000073169) #10	TUBGCP6 (ENSG00000128159) #11	HDAC10 (ENSG00000100429) #12	MAPK12 (ENSG00000188130) #13	MAPK11 (ENSG00000185386) #14	PLXNB2 (ENSG00000196576) #15	DENND6B (ENSG00000205593) #16	PPP6R2 (ENSG00000100239) #17	SBF1 (ENSG00000100241) #18	ADM2 (ENSG00000128165) #19	MIOX (ENSG00000100253) #20	LMF2 (ENSG00000100258) #21	NCAPH2 (ENSG00000025770) #22	SCO2 (ENSG00000284194)	TYMP (ENSG00000025708) #23	ODF3B (ENSG00000177989)	KLHDC7B (ENSG00000130487)	SYCE3 (ENSG00000217442) #24	CPT1B (ENSG00000205560) #25	CHKB (ENSG00000100288)	MAPK8IP2 (ENSG00000008735)	ARSA (ENSG00000100299)	SHANK3 (ENSG00000251322)	ACR (ENSG00000100312)	RABL2B (ENSG00000079974)
Gorilla	MODERN SPECIES	13	MOV10L1 (ENSGGOG00000010110) #7	PANX (ENSGGOG00000014386) #8	TRABD (ENSGGOG00000014397) #9	SELENOO (ENSGGOG00000014406) #10	TUBGCP6 (ENSGGOG00000034816) #11	HDAC10 (ENSGGOG00000014445) #12	MAPK12 (ENSGGOG00000014464) #13	MAPK11 (ENSGGOG00000027293) #14	PLXNB2 (ENSGGOG00000006625) #15	DENND6B (ENSGGOG00000013615) #16	PPP6R2 (ENSGGOG00000012995) #17	SBF1 (ENSGGOG00000013005) #18	ENSGGOG00000013032	MIOX (ENSGGOG00000013037) #20	LMF2 (ENSGGOG00000002426) #21	NCAPH2 (ENSGGOG00000010975) #22	SCO2 (ENSGGOG00000010986)	TYMP (ENSGGOG00000010990) #23	ODF3B (ENSGGOG00000010999)	ENSGGOG00000002851	SYCE3 (ENSGGOG00000002854) #24	CPT1B (ENSGGOG00000005632) #25	CHKB (ENSGGOG00000005629)	MAPK8IP2 (ENSGGOG00000007277)	ARSA (ENSGGOG00000007285)	SHANK3 (ENSGGOG00000011582)	ACR (ENSGGOG00000025349)
Orangutan	MODERN SPECIES	13	TTLL8 (ENSPPYG00000011971)	MLC1 (ENSPPYG00000011973)	MOV10L1 (ENSPPYG00000011974) #7	PANX2 (ENSPPYG00000011975) #8	TRABD (ENSPPYG00000011976) #9	SELENOO (ENSPPYG00000011977) #10	HDAC10 (ENSPPYG00000011979) #12	MAPK12 (ENSPPYG00000011980) #13	MAPK11 (ENSPPYG00000011981) #14	PLXNB2 (ENSPPYG00000011982) #15	DENND6B (ENSPPYG00000011984) #16	PPP6R2 (ENSPPYG00000011985) #17	ADM2 (ENSPPYG00000040451) #19	MIOX (ENSPPYG00000011988) #20	LMF2 (ENSPPYG00000011989) #21	NCAPH2 (ENSPPYG00000011990) #22	SCO2 (ENSPPYG00000011991)	TYMP (ENSPPYG00000011992) #23	ENSPPYG00000033211	ENSPPYG00000011993	SYCE3 (ENSPPYG00000039038) #24	CPT1B (ENSPPYG00000011994) #25	CHKB (ENSPPYG00000031935)	MAPK8IP2 (ENSPPYG00000011996)	ARSA (ENSPPYG00000011997)	SHANK3 (ENSPPYG00000011998)	ENSPPYG00000011999	RABL2B (ENSPPYG00000012000)	ENSPPYG00000038598	ENSPPYG00000010610
Gibbon	MODERN SPECIES	22	PANX2 (ENSNLEG00000000458) #8	ENSNLEG00000000464 #9	ENSNLEG00000000489	ENSNLEG00000035366 #10	ENSNLEG00000001475 #11	HDAC10 (ENSNLEG00000000494) #12	MAPK12 (ENSNLEG00000000606) #13	MAPK11 (ENSNLEG00000000628) #14	PLXNB2 (ENSNLEG00000000633) #15	DENND6B (ENSNLEG00000000634) #16	PPP6R2 (ENSNLEG00000000637) #17	SBF1 (ENSNLEG00000026690) #18	ADM2 (ENSNLEG00000000721) #19	MIOX (ENSNLEG00000000729) #20	ENSNLEG00000000757 #21	NCAPH2 (ENSNLEG00000000768) #22	SCO2 (ENSNLEG00000000933)	ENSNLEG00000033749	ENSNLEG00000000940 #23	ODF3B (ENSNLEG00000000946)	ENSNLEG00000029667 #24	CPT1B (ENSNLEG00000000958) #25	CHKB (ENSNLEG00000001003)	ENSNLEG00000034619	ARSA (ENSNLEG00000001104)	SHANK3 (ENSNLEG00000001182)	ACR (ENSNLEG00000001212)	ENSNLEG00000030435	ENSNLEG00000009151
Platyrrhini	ANCESTRAL SPECIES	30	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211.i #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Cebidae	ANCESTRAL SPECIES	31	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211.i #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Cebidae_a	ANCESTRAL SPECIES	70	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211.i #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00910000148076	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Capuchin	MODERN SPECIES	329	MLC1 (ENSCCAG00000035580)	MOV10L1 (ENSCCAG00000020759) #7	PANX2 (ENSCCAG00000028351) #8	TRABD (ENSCCAG00000012057) #9	SELENOO (ENSCCAG00000036681) #10	TUBGCP6 (ENSCCAG00000023364) #11	MAPK12 (ENSCCAG00000031607) #13	MAPK11 (ENSCCAG00000038007) #14	PLXNB2 (ENSCCAG00000026967) #15	DENND6B (ENSCCAG00000036945) #16	PPP6R2 (ENSCCAG00000032805) #17	SBF1 (ENSCCAG00000036227) #18	ADM2 (ENSCCAG00000026737) #19	MIOX (ENSCCAG00000035210) #20	LMF2 (ENSCCAG00000021039) #21	NCAPH2 (ENSCCAG00000013221) #22	TYMP (ENSCCAG00000033017) #23	ENSCCAG00000030307	SYCE3 (ENSCCAG00000035232) #24	CPT1B (ENSCCAG00000030844) #25	CHKB (ENSCCAG00000032870)	MAPK8IP2 (ENSCCAG00000022883)	ARSA (ENSCCAG00000031741)	SHANK3 (ENSCCAG00000033121)	ACR (ENSCCAG00000021049)	ENSCCAG00000025944
Bolivian squirrel monkey	MODERN SPECIES	94	PANX2 (ENSSBOG00000020306) #8	TRABD (ENSSBOG00000027202) #9	SELENOO (ENSSBOG00000024106) #10	TUBGCP6 (ENSSBOG00000032357) #11	HDAC10 (ENSSBOG00000024552) #12	MAPK12 (ENSSBOG00000021144) #13	MAPK11 (ENSSBOG00000034937) #14	PLXNB2 (ENSSBOG00000024902) #15	DENND6B (ENSSBOG00000029018) #16	PPP6R2 (ENSSBOG00000033652) #17	ENSSBOG00000026471	SBF1 (ENSSBOG00000035233) #18	ADM2 (ENSSBOG00000035706) #19	MIOX (ENSSBOG00000025777) #20	LMF2 (ENSSBOG00000031093) #21	NCAPH2 (ENSSBOG00000026340) #22	ENSSBOG00000021451	TYMP (ENSSBOG00000035212) #23	ENSSBOG00000018910	SYCE3 (ENSSBOG00000020713) #24	CPT1B (ENSSBOG00000031413) #25	CHKB (ENSSBOG00000015516)	MAPK8IP2 (ENSSBOG00000028182)	ARSA (ENSSBOG00000025351)	SHANK3 (ENSSBOG00000012932)	ACR (ENSSBOG00000027884)	ENSSBOG00000033266	ENSSBOG00000021779	RRP7A (ENSSBOG00000009234)	SERHL2 (ENSSBOG00000026990)	NFAM1 (ENSSBOG00000032935)
Marmoset	MODERN SPECIES		PANX2 (ENSCJAG00000003392) #8	TRABD (ENSCJAG00000003384) #9	SELENOO (ENSCJAG00000003360) #10	TUBGCP6 (ENSCJAG00000003351) #11	HDAC10 (ENSCJAG00000003337) #12	MAPK12 (ENSCJAG00000003322) #13	MAPK11 (ENSCJAG00000078559) #14	PLXNB2 (ENSCJAG00000003197) #15	DENND6B (ENSCJAG00000077008) #16	PPP6R2 (ENSCJAG00000019031) #17	NDUFA4 (ENSCJAG00000086289)	SBF1 (ENSCJAG00000019051) #18	ENSCJAG00000041530 #19	MIOX (ENSCJAG00000019118) #20	LMF2 (ENSCJAG00000019135) #21	NCAPH2 (ENSCJAG00000019155) #22	SCO2 (ENSCJAG00000019173)	TYMP (ENSCJAG00000037938) #23	ODF3B (ENSCJAG00000019177)	KLHDC7B (ENSCJAG00000073214)	SYCE3 (ENSCJAG00000041610) #24	CPT1B (ENSCJAG00000018317) #25	CHKB (ENSCJAG00000018358)	MAPK8IP2 (ENSCJAG00000018368)	ARSA (ENSCJAG00000003186)	SHANK3 (ENSCJAG00000018406)	ACR (ENSCJAG00000018409)	ENSCJAG00000018414	ENSCJAG00000071555
Mas night monkey	MODERN SPECIES	1297	ENSANAG00000018876	PANX2 (ENSANAG00000032907) #8	TRABD (ENSANAG00000028851) #9	SELENOO (ENSANAG00000027197) #10	TUBGCP6 (ENSANAG00000027964) #11	HDAC10 (ENSANAG00000035124) #12	MAPK12 (ENSANAG00000034296) #13	MAPK11 (ENSANAG00000035217) #14	PLXNB2 (ENSANAG00000025480) #15	DENND6B (ENSANAG00000009719) #16	ENSANAG00000031328 #17	SBF1 (ENSANAG00000032281) #18	ADM2 (ENSANAG00000036267) #19	ENSANAG00000036962 #20	LMF2 (ENSANAG00000022172) #21	NCAPH2 (ENSANAG00000037415) #22	TYMP (ENSANAG00000030523) #23	ENSANAG00000016215	SYCE3 (ENSANAG00000035469) #24
Tarsier	MODERN SPECIES	1686														MIOX (ENSTSYG00000028971) #20	LMF2 (ENSTSYG00000013787) #21	NCAPH2 (ENSTSYG00000035542) #22
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Mouse lemur	MODERN SPECIES	29	MOV10L1 (ENSMICG00000007267) #7	PANX2 (ENSMICG00000037105) #8	TRABD (ENSMICG00000030662) #9	SELENOO (ENSMICG00000017789) #10	TUBGCP6 (ENSMICG00000017790) #11	HDAC10 (ENSMICG00000017791) #12	MAPK12 (ENSMICG00000027958) #13	MAPK11 (ENSMICG00000028966) #14	PLXNB2 (ENSMICG00000005737) #15	DENND6B (ENSMICG00000033648) #16	PPP6R2 (ENSMICG00000012829) #17	SBF1 (ENSMICG00000012876) #18	ADM2 (ENSMICG00000043329) #19	MIOX (ENSMICG00000046648) #20	LMF2 (ENSMICG00000001673) #21	NCAPH2 (ENSMICG00000012958) #22	TYMP (ENSMICG00000013000) #23	ODF3B (ENSMICG00000027739)	ENSMICG00000031623	SYCE3 (ENSMICG00000034240) #24	CPT1B (ENSMICG00000000856) #25	MAPK8IP2 (ENSMICG00000000871)	CHKB (ENSMICG00000044169)	ARSA (ENSMICG00000036714)	SHANK3 (ENSMICG00000029739)	ENSMICG00000000907	ENSMICG00000031301	ENSMICG00000002190	ENSMICG00000010165	HMOX1 (ENSMICG00000041807)	TOM1 (ENSMICG00000010149)
Lemuriformes_a	ANCESTRAL SPECIES	129	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Coquerels sifaka	MODERN SPECIES	418	PANX2 (ENSPCOG00000024289) #8	ENSPCOG00000020044 #9	SELENOO (ENSPCOG00000011964) #10	TUBGCP6 (ENSPCOG00000019138) #11	HDAC10 (ENSPCOG00000018273) #12	MAPK12 (ENSPCOG00000018807) #13	MAPK11 (ENSPCOG00000019102) #14	PLXNB2 (ENSPCOG00000023873) #15	DENND6B (ENSPCOG00000016120) #16	ENSPCOG00000023366	PPP6R2 (ENSPCOG00000027708) #17	SBF1 (ENSPCOG00000028310) #18	ADM2 (ENSPCOG00000017808) #19	MIOX (ENSPCOG00000014546) #20	LMF2 (ENSPCOG00000026645) #21	NCAPH2 (ENSPCOG00000006726) #22	TYMP (ENSPCOG00000022381) #23	ODF3B (ENSPCOG00000025677)	ENSPCOG00000001058	SYCE3 (ENSPCOG00000019404) #24	CPT1B (ENSPCOG00000017234) #25	CHKB (ENSPCOG00000023771)	MAPK8IP2 (ENSPCOG00000015005)	ARSA (ENSPCOG00000016407)	SHANK3 (ENSPCOG00000014832)	ACR (ENSPCOG00000024596)	ENSPCOG00000024865	VOPP1 (ENSPCOG00000026685)	LANCL2 (ENSPCOG00000010923)	EGFR (ENSPCOG00000021048)	SEC61G (ENSPCOG00000014561)
Greater bamboo lemur	MODERN SPECIES	454												PPP6R2 (ENSPSMG00000006551) #17	ENSPSMG00000006449 #18	ADM2 (ENSPSMG00000006443) #19	MIOX (ENSPSMG00000006437) #20	NCAPH2 (ENSPSMG00000006191) #22	SCO2 (ENSPSMG00000006120)	TYMP (ENSPSMG00000006092) #23	ODF3B (ENSPSMG00000006048)	SYCE3 (ENSPSMG00000006034) #24	CPT1B (ENSPSMG00000005896) #25	CHKB (ENSPSMG00000005845)	MAPK8IP2 (ENSPSMG00000005826)	ARSA (ENSPSMG00000005789)
Bushbaby	MODERN SPECIES	122	MLC1 (ENSOGAG00000013281)	MOV10L1 (ENSOGAG00000013283) #7	PANX2 (ENSOGAG00000033894) #8	TRABD (ENSOGAG00000006316) #9	SELENOO (ENSOGAG00000014148) #10	TUBGCP6 (ENSOGAG00000014151) #11	HDAC10 (ENSOGAG00000014163) #12	MAPK12 (ENSOGAG00000014169) #13	MAPK11 (ENSOGAG00000014172) #14	PLXNB2 (ENSOGAG00000014176) #15	DENND6B (ENSOGAG00000026256) #16	PPP6R2 (ENSOGAG00000013449) #17	SBF1 (ENSOGAG00000016393) #18	MIOX (ENSOGAG00000003520) #20	LMF2 (ENSOGAG00000016425) #21	NCAPH2 (ENSOGAG00000016430) #22	SCO2 (ENSOGAG00000033205)	TYMP (ENSOGAG00000027276) #23	ODF3B (ENSOGAG00000034838)	ENSOGAG00000029834	SYCE3 (ENSOGAG00000034222) #24	CPT1B (ENSOGAG00000001411) #25	CHKB (ENSOGAG00000000161)	MAPK8IP2 (ENSOGAG00000031163)	ARSA (ENSOGAG00000000163)	SHANK3 (ENSOGAG00000029576)	ENSOGAG00000034408	ENSOGAG00000009123
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT01020000230616	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430
Tree shrew	MODERN SPECIES	601																ENSTBEG00000016380 #22	SCO2 (ENSTBEG00000016548)	ENSTBEG00000016606 #23
Glires	ANCESTRAL SPECIES	4	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT01020000230616	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906	ENSGT00940000159679
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906	ENSGT00940000159679
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906	ENSGT00940000159679
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	1	Mov10l1 (ENSCGRG00001007137) #7	Panx2 (ENSCGRG00001022483) #8	Trabd (ENSCGRG00001022719) #9	Selenoo (ENSCGRG00001022961) #10	Tubgcp6 (ENSCGRG00001022046) #11	Hdac10 (ENSCGRG00001022290) #12	Mapk12 (ENSCGRG00001004856) #13	Mapk11 (ENSCGRG00001010404) #14	ENSCGRG00001021059 #15	Dennd6b (ENSCGRG00001021451) #16	Ppp6r2 (ENSCGRG00001023623) #17	Sbf1 (ENSCGRG00001001203) #18	Adm2 (ENSCGRG00001023607) #19	Miox (ENSCGRG00001003260) #20	Lmf2 (ENSCGRG00001020956) #21	ENSCGRG00001021303 #22	Sco2 (ENSCGRG00001009354)	Tymp (ENSCGRG00001002698) #23	Odf3b (ENSCGRG00001003216)	ENSCGRG00001010512	Syce3 (ENSCGRG00001023759) #24	Cpt1b (ENSCGRG00001001930) #25	Chkb (ENSCGRG00001003456)	Mapk8ip2 (ENSCGRG00001023653)	Arsa (ENSCGRG00001021147)	Shank3 (ENSCGRG00001021597)	Acr (ENSCGRG00001010552)	Rabl2 (ENSCGRG00001021894)	Syt10 (ENSCGRG00001022503)	Alg10b (ENSCGRG00001023011)	Cpne8 (ENSCGRG00001023120)
Chinese hamster chok1gshd	MODERN SPECIES	2	Zbtb25 (ENSCGRG00001021536)	Zbtb1 (ENSCGRG00001019973)	Hspa2 (ENSCGRG00001011464)	Ppp1r36 (ENSCGRG00001016430)	Plekhg3 (ENSCGRG00001018822)	Sptb (ENSCGRG00001019015)	Gpx2 (ENSCGRG00001008829)	Rab15 (ENSCGRG00001006853)	Fntb (ENSCGRG00001009078)	Max (ENSCGRG00001015324)	Fut8 (ENSCGRG00001018667)	ENSCGRG00001016851	ENSCGRG00001016418	Gphn (ENSCGRG00001016321)	Garin2 (ENSCGRG00001004808)	ENSCGRG00001007015 #22	Pals1 (ENSCGRG00001018649)	ENSCGRG00001016651	Eif2s1 (ENSCGRG00001015826)	Plek2 (ENSCGRG00001015296)	Tmem229b (ENSCGRG00001011506)	Plekhh1 (ENSCGRG00001010948)	Pigh (ENSCGRG00001016093)	Arg2 (ENSCGRG00001022374)	Vti1b (ENSCGRG00001021512)	Rdh11 (ENSCGRG00001020500)	Rdh12 (ENSCGRG00001018943)	Zfyve26 (ENSCGRG00001007545)	Rad51b (ENSCGRG00001014395)	Zfp36l1 (ENSCGRG00001010926)	Actn1 (ENSCGRG00001015821)
Golden Hamster	MODERN SPECIES	626	Mov10l1 (ENSMAUG00000003667) #7	Panx2 (ENSMAUG00000022221) #8	Trabd (ENSMAUG00000009029) #9	Selenoo (ENSMAUG00000004131) #10	Tubgcp6 (ENSMAUG00000004607) #11	Hdac10 (ENSMAUG00000002367) #12	Mapk12 (ENSMAUG00000022070) #13	Mapk11 (ENSMAUG00000022264) #14	ENSMAUG00000012310 #15	Dennd6b (ENSMAUG00000005942) #16	Ppp6r2 (ENSMAUG00000008887) #17	Sbf1 (ENSMAUG00000004005) #18	Adm2 (ENSMAUG00000012594) #19	Miox (ENSMAUG00000013732) #20	Lmf2 (ENSMAUG00000001488) #21	Ncaph2 (ENSMAUG00000013053) #22	Sco2 (ENSMAUG00000010587)	Tymp (ENSMAUG00000004074) #23	Odf3b (ENSMAUG00000008739)	Syce3 (ENSMAUG00000005251) #24	ENSMAUG00000007948 #25	ENSMAUG00000011968 #25	Chkb (ENSMAUG00000008994)	Mapk8ip2 (ENSMAUG00000010821)	Arsa (ENSMAUG00000004167)	Shank3 (ENSMAUG00000018491)	Acr (ENSMAUG00000006612)	Rabl2 (ENSMAUG00000010955)	Syt10 (ENSMAUG00000009924)	Alg10b (ENSMAUG00000010415)	Cpne8 (ENSMAUG00000016239)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906	ENSGT00940000159679
Northern American deer mouse	MODERN SPECIES	12	Ttll8 (ENSPEMG00000012821)	Mlc1 (ENSPEMG00000002209)	Mov10l1 (ENSPEMG00000022147) #7	Panx2 (ENSPEMG00000022510) #8	Trabd (ENSPEMG00000021540) #9	Selenoo (ENSPEMG00000013321) #10	Hdac10 (ENSPEMG00000021370) #12	Mapk12 (ENSPEMG00000022721) #13	Mapk11 (ENSPEMG00000022207) #14	Plxnb2 (ENSPEMG00000022994) #15	Dennd6b (ENSPEMG00000015105) #16	Ppp6r2 (ENSPEMG00000031380) #17	ENSPEMG00000024990 #18	Adm2 (ENSPEMG00000013586) #19	Miox (ENSPEMG00000004492) #20	Ncaph2 (ENSPEMG00000022288) #22	Sco2 (ENSPEMG00000026350)	Tymp (ENSPEMG00000021367) #23	Odf3b (ENSPEMG00000013237)	Klhdc7b (ENSPEMG00000025743)	Syce3 (ENSPEMG00000022067) #24	Cpt1b (ENSPEMG00000021514) #25	Chkb (ENSPEMG00000022436)	Mapk8ip2 (ENSPEMG00000023117)	Arsa (ENSPEMG00000022901)	Shank3 (ENSPEMG00000023862)	Acr (ENSPEMG00000021431)	Rabl2 (ENSPEMG00000024045)	ENSPEMG00000025615	Syt10 (ENSPEMG00000017020)	Alg10b (ENSPEMG00000025886)
Prairie vole	MODERN SPECIES	2	Mov10l1 (ENSMOCG00000020419) #7	Panx2 (ENSMOCG00000008412) #8	Trabd (ENSMOCG00000013339) #9	Selenoo (ENSMOCG00000010528) #10	Tubgcp6 (ENSMOCG00000013285) #11	Hdac10 (ENSMOCG00000020024) #12	Mapk12 (ENSMOCG00000003785) #13	Mapk11 (ENSMOCG00000015781) #14	ENSMOCG00000015550 #15	Dennd6b (ENSMOCG00000019229) #16	ENSMOCG00000021080 #17	Sbf1 (ENSMOCG00000012143) #18	Adm2 (ENSMOCG00000010281) #19	Miox (ENSMOCG00000016130) #20	Lmf2 (ENSMOCG00000001200) #21	Ncaph2 (ENSMOCG00000001202) #22	Tymp (ENSMOCG00000014827) #23	Odf3b (ENSMOCG00000017597)	Syce3 (ENSMOCG00000012683) #24	ENSMOCG00000001265 #25	ENSMOCG00000011037 #25	Chkb (ENSMOCG00000000306)	Mapk8ip2 (ENSMOCG00000017599)	Arsa (ENSMOCG00000015278)	ENSMOCG00000001794	Shank3 (ENSMOCG00000009362)	Acr (ENSMOCG00000004907)	Rabl2 (ENSMOCG00000002775)	Syt10 (ENSMOCG00000010483)	Alg10b (ENSMOCG00000022833)	Cpne8 (ENSMOCG00000019821)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00860000136149	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906
Mus	ANCESTRAL SPECIES	11	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00860000136149	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906
Shrew mouse	MODERN SPECIES	8	Mov10l1 (MGP_PahariEiJ_G0020153) #7	Panx2 (MGP_PahariEiJ_G0020154) #8	Trabd (MGP_PahariEiJ_G0020155) #9	Selenoo (MGP_PahariEiJ_G0020156) #10	Tubgcp6 (MGP_PahariEiJ_G0020157) #11	Hdac10 (MGP_PahariEiJ_G0020158) #12	Mapk12 (MGP_PahariEiJ_G0020159) #13	Mapk11 (MGP_PahariEiJ_G0020160) #14	Plxnb2 (MGP_PahariEiJ_G0020161) #15	Dennd6b (MGP_PahariEiJ_G0020162) #16	Ppp6r2 (MGP_PahariEiJ_G0020163) #17	Sbf1 (MGP_PahariEiJ_G0020164) #18	Adm2 (MGP_PahariEiJ_G0020165) #19	Miox (MGP_PahariEiJ_G0020166) #20	Lmf2 (MGP_PahariEiJ_G0020167) #21	Ncaph2 (MGP_PahariEiJ_G0020168) #22	Sco2 (MGP_PahariEiJ_G0020169)	Tymp (MGP_PahariEiJ_G0020170) #23	Odf3b (MGP_PahariEiJ_G0020171)	MGP_PahariEiJ_G0020172	Syce3 (MGP_PahariEiJ_G0020173) #24	Cpt1b (MGP_PahariEiJ_G0020175) #25	Chkb (MGP_PahariEiJ_G0020174)	MGP_PahariEiJ_G0020176	Mapk8ip2 (MGP_PahariEiJ_G0020177)	Arsa (MGP_PahariEiJ_G0020178)	Shank3 (MGP_PahariEiJ_G0020179)	Acr (MGP_PahariEiJ_G0020180)	Rabl2 (MGP_PahariEiJ_G0020181)	Syt10 (MGP_PahariEiJ_G0020182)	Alg10b (MGP_PahariEiJ_G0020183)
Mus_A	DUPLICATION
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443.k #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00860000136149	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443.k #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00860000136149	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443.k #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00860000136149	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551	ENSGT00940000158899	ENSGT00390000012906
Steppe mouse	MODERN SPECIES	3375	Mlc1 (ENSMSIG00000021277)	Mov10l1 (ENSMSIG00000021302) #7	Panx2 (ENSMSIG00000021430) #8	Selenoo (ENSMSIG00000021500) #10	Tubgcp6 (ENSMSIG00000021518) #11	Hdac10 (ENSMSIG00000021649) #12	Mapk12 (ENSMSIG00000021754) #13	Mapk11 (ENSMSIG00000021771) #14	Plxnb2 (ENSMSIG00000021786) #15	Dennd6b (ENSMSIG00000021830) #16	Ppp6r2 (ENSMSIG00000022106) #17	Sbf1 (ENSMSIG00000022239) #18	Adm2 (ENSMSIG00000022357) #19	Miox (ENSMSIG00000022365) #20	Lmf2 (ENSMSIG00000022386) #21	Ncaph2 (ENSMSIG00000022410) #22	Sco2 (ENSMSIG00000022541)	Tymp (ENSMSIG00000022545) #23	Odf3b (ENSMSIG00000022554)	ENSMSIG00000022560	Syce3 (ENSMSIG00000022563) #24	Cpt1b (ENSMSIG00000022570) #25	Chkb (ENSMSIG00000022596)	ENSMSIG00000022637	Mapk8ip2 (ENSMSIG00000022642)	Arsa (ENSMSIG00000022691)	Shank3 (ENSMSIG00000022725)	Acr (ENSMSIG00000022877)	Rabl2 (ENSMSIG00000022891)	ENSMSIG00000022915	Syt10 (ENSMSIG00000022932)
spretus	MODERN SPECIES	6	Mov10l1 (MGP_SPRETEiJ_G0021045) #7	Panx2 (MGP_SPRETEiJ_G0021046) #8	Trabd (MGP_SPRETEiJ_G0021047) #9	MGP_SPRETEiJ_G0021048 #10	Tubgcp6 (MGP_SPRETEiJ_G0021049) #11	Hdac10 (MGP_SPRETEiJ_G0021050) #12	Mapk12 (MGP_SPRETEiJ_G0021051) #13	Mapk11 (MGP_SPRETEiJ_G0021052) #14	Plxnb2 (MGP_SPRETEiJ_G0021053) #15	Dennd6b (MGP_SPRETEiJ_G0021054) #16	Ppp6r2 (MGP_SPRETEiJ_G0021055) #17	Sbf1 (MGP_SPRETEiJ_G0021056) #18	Adm2 (MGP_SPRETEiJ_G0021057) #19	Miox (MGP_SPRETEiJ_G0021058) #20	Lmf2 (MGP_SPRETEiJ_G0021059) #21	Ncaph2 (MGP_SPRETEiJ_G0021060) #22	Sco2 (MGP_SPRETEiJ_G0021061)	Tymp (MGP_SPRETEiJ_G0021062) #23	Odf3b (MGP_SPRETEiJ_G0021063)	MGP_SPRETEiJ_G0021064	Syce3 (MGP_SPRETEiJ_G0021065) #24	Cpt1b (MGP_SPRETEiJ_G0021067) #25	Chkb (MGP_SPRETEiJ_G0021066)	MGP_SPRETEiJ_G0021068	Mapk8ip2 (MGP_SPRETEiJ_G0021069)	MGP_SPRETEiJ_G0021070	Shank3 (MGP_SPRETEiJ_G0021071)	Acr (MGP_SPRETEiJ_G0021072)	Rabl2 (MGP_SPRETEiJ_G0021073)	Syt10 (MGP_SPRETEiJ_G0021074)	Alg10b (MGP_SPRETEiJ_G0021075)
Mouse	MODERN SPECIES	6	Mov10l1 (ENSMUSG00000015365) #7	Panx2 (ENSMUSG00000058441) #8	Trabd (ENSMUSG00000015363) #9	Selenoo (ENSMUSG00000035757) #10	Tubgcp6 (ENSMUSG00000051786) #11	Hdac10 (ENSMUSG00000062906) #12	Mapk12 (ENSMUSG00000022610) #13	Mapk11 (ENSMUSG00000053137) #14	Plxnb2 (ENSMUSG00000036606) #15	Dennd6b (ENSMUSG00000015377) #16	Ppp6r2 (ENSMUSG00000036561) #17	Sbf1 (ENSMUSG00000036529) #18	Adm2 (ENSMUSG00000054136) #19	Miox (ENSMUSG00000022613) #20	Lmf2 (ENSMUSG00000022614) #21	Ncaph2 (ENSMUSG00000008690) #22	Sco2 (ENSMUSG00000091780)	Tymp (ENSMUSG00000022615) #23	Odf3b (ENSMUSG00000047394)	Klhdc7b (ENSMUSG00000091680)	Syce3 (ENSMUSG00000078938) #24	Cpt1b (ENSMUSG00000078937) #25	Chkb (ENSMUSG00000022617)	Mapk8ip2 (ENSMUSG00000022619)	Arsa (ENSMUSG00000022620)	Shank3 (ENSMUSG00000022623)	Acr (ENSMUSG00000022622)	Rabl2 (ENSMUSG00000022621)	Syt10 (ENSMUSG00000063260)	Alg10b (ENSMUSG00000075470)	Cpne8 (ENSMUSG00000052560)
Ryukyu mouse	MODERN SPECIES	6	Mov10l1 (MGP_CAROLIEiJ_G0020148) #7	Panx2 (MGP_CAROLIEiJ_G0020149) #8	Trabd (MGP_CAROLIEiJ_G0020150) #9	MGP_CAROLIEiJ_G0020151 #10	Tubgcp6 (MGP_CAROLIEiJ_G0020152) #11	Hdac10 (MGP_CAROLIEiJ_G0020153) #12	Mapk12 (MGP_CAROLIEiJ_G0020154) #13	Mapk11 (MGP_CAROLIEiJ_G0020155) #14	Plxnb2 (MGP_CAROLIEiJ_G0020156) #15	Dennd6b (MGP_CAROLIEiJ_G0020157) #16	Ppp6r2 (MGP_CAROLIEiJ_G0020158) #17	Sbf1 (MGP_CAROLIEiJ_G0020159) #18	Adm2 (MGP_CAROLIEiJ_G0020160) #19	Miox (MGP_CAROLIEiJ_G0020161) #20	Lmf2 (MGP_CAROLIEiJ_G0020162) #21	Ncaph2 (MGP_CAROLIEiJ_G0020163) #22	Sco2 (MGP_CAROLIEiJ_G0020164)	Tymp (MGP_CAROLIEiJ_G0020165) #23	Odf3b (MGP_CAROLIEiJ_G0020166)	MGP_CAROLIEiJ_G0020167	Syce3 (MGP_CAROLIEiJ_G0020168) #24	Cpt1b (MGP_CAROLIEiJ_G0020170) #25	Chkb (MGP_CAROLIEiJ_G0020169)	MGP_CAROLIEiJ_G0020171	Mapk8ip2 (MGP_CAROLIEiJ_G0020172)	MGP_CAROLIEiJ_G0020173	Shank3 (MGP_CAROLIEiJ_G0020174)	Acr (MGP_CAROLIEiJ_G0020175)	Rabl2 (MGP_CAROLIEiJ_G0020176)	Syt10 (MGP_CAROLIEiJ_G0020177)	Alg10b (MGP_CAROLIEiJ_G0020178)
Mus_A	ANCESTRAL SPECIES																	ENSGT00390000014443.l #22
Mus_B	ANCESTRAL SPECIES																	ENSGT00390000014443.l #22
Mus_C	ANCESTRAL SPECIES																	ENSGT00390000014443.l #22
Steppe mouse	MODERN SPECIES	3211						Ezr (ENSMSIG00000014644)	Sytl3 (ENSMSIG00000014687)	ENSMSIG00000014712	Tmem181a (ENSMSIG00000014774)	Tulp4 (ENSMSIG00000014861)	Gtf2h5 (ENSMSIG00000014886)	Serac1 (ENSMSIG00000014904)	Synj2 (ENSMSIG00000015028)	Snx9 (ENSMSIG00000015240)	Zdhhc14 (ENSMSIG00000015288)	ENSMSIG00000015308 #22	Tmem242 (ENSMSIG00000015329)	Arid1b (ENSMSIG00000015417)	ENSMSIG00000015661	ENSMSIG00000015702
Rat	MODERN SPECIES	17	Mlc1 (ENSRNOG00000032871)	Mov10l1 (ENSRNOG00000031093) #7	Panx2 (ENSRNOG00000055530) #8	Trabd (ENSRNOG00000029095) #9	Selenoo (ENSRNOG00000060120) #10	Tubgcp6 (ENSRNOG00000006028) #11	Hdac10 (ENSRNOG00000031915) #12	Mapk12 (ENSRNOG00000031233) #13	Mapk11 (ENSRNOG00000006984) #14	Plxnb2 (ENSRNOG00000007133) #15	Dennd6b (ENSRNOG00000029866) #16	Ppp6r2 (ENSRNOG00000026425) #17	Sbf1 (ENSRNOG00000008392) #18	Adm2 (ENSRNOG00000029830) #19	Miox (ENSRNOG00000008694) #20	Ncaph2 (ENSRNOG00000009598) #22	Tymp (ENSRNOG00000066458)	Tymp (ENSRNOG00000032394) #23	Odf3b (ENSRNOG00000037060)	Klhdc7b (ENSRNOG00000032419)	Syce3 (ENSRNOG00000042056) #24	Cpt1b (ENSRNOG00000010438) #25	Chkb (ENSRNOG00000011404)	ENSRNOG00000063153	Mapk8ip2 (ENSRNOG00000032828)	Arsa (ENSRNOG00000012953)	Shank3 (ENSRNOG00000052296)	Acr (ENSRNOG00000029762)	Rabl2 (ENSRNOG00000013947)	Syt10 (ENSRNOG00000014296)	Alg10 (ENSRNOG00000014511)
Upper Galilee mountains blind mole rat	MODERN SPECIES	895	Trabd (ENSNGAG00000007919) #9	Selenoo (ENSNGAG00000011370) #10	Tubgcp6 (ENSNGAG00000001119) #11	Hdac10 (ENSNGAG00000021671) #12	Mapk12 (ENSNGAG00000017682) #13	Mapk11 (ENSNGAG00000001344) #14	ENSNGAG00000010358 #15	ENSNGAG00000011156 #15	Dennd6b (ENSNGAG00000017789) #16	Ppp6r2 (ENSNGAG00000018791) #17	Sbf1 (ENSNGAG00000005935) #18	Adm2 (ENSNGAG00000020892) #19	Miox (ENSNGAG00000019418) #20	ENSNGAG00000023096	Lmf2 (ENSNGAG00000013536) #21	Ncaph2 (ENSNGAG00000020931) #22	Sco2 (ENSNGAG00000016352)	Tymp (ENSNGAG00000019416) #23	Odf3b (ENSNGAG00000013244)	Syce3 (ENSNGAG00000002569) #24	Cpt1b (ENSNGAG00000021066) #25	Chkb (ENSNGAG00000013327)	Mapk8ip2 (ENSNGAG00000014860)	Arsa (ENSNGAG00000013935)	Shank3 (ENSNGAG00000016865)	ENSNGAG00000016824	Rabl2 (ENSNGAG00000012843)
Lesser Egyptian jerboa	MODERN SPECIES	42	Panx2 (ENSJJAG00000022586) #8	Trabd (ENSJJAG00000002026) #9	Selenoo (ENSJJAG00000011247) #10	Tubgcp6 (ENSJJAG00000001268) #11	ENSJJAG00000010762 #12	Mapk12 (ENSJJAG00000023055) #13	Mapk11 (ENSJJAG00000022908) #14	ENSJJAG00000009551 #15	ENSJJAG00000000645 #15	Dennd6b (ENSJJAG00000002679) #16	Ppp6r2 (ENSJJAG00000012079) #17	Sbf1 (ENSJJAG00000004040) #18	Adm2 (ENSJJAG00000000484) #19	Miox (ENSJJAG00000008090) #20	Lmf2 (ENSJJAG00000015359) #21	Ncaph2 (ENSJJAG00000019803) #22	Sco2 (ENSJJAG00000005906)	Tymp (ENSJJAG00000013852) #23	Odf3b (ENSJJAG00000002954)	Syce3 (ENSJJAG00000010728) #24	ENSJJAG00000009853 #25	ENSJJAG00000002397 #25	Chkb (ENSJJAG00000013076)	Mapk8ip2 (ENSJJAG00000010188)	Arsa (ENSJJAG00000008805)	Shank3 (ENSJJAG00000016849)	ENSJJAG00000009091	Rabl2 (ENSJJAG00000010792)
Kangaroo rat	MODERN SPECIES	406	Mov10l1 (ENSDORG00000013249) #7	Panx2 (ENSDORG00000006971) #8	Trabd (ENSDORG00000013086) #9	Selenoo (ENSDORG00000013088) #10	Tubgcp6 (ENSDORG00000013091) #11	ENSDORG00000026919 #12	Mapk12 (ENSDORG00000001843) #13	ENSDORG00000013308 #15	ENSDORG00000027708 #15	Dennd6b (ENSDORG00000013310) #16	Ppp6r2 (ENSDORG00000014499) #17	Sbf1 (ENSDORG00000014505) #18	Adm2 (ENSDORG00000028675) #19	Miox (ENSDORG00000014511) #20	Lmf2 (ENSDORG00000014512) #21	ENSDORG00000027265 #22	ENSDORG00000027258 #23	Syce3 (ENSDORG00000009365) #24	Cpt1b (ENSDORG00000003175) #25	Chkb (ENSDORG00000003176)	Mapk8ip2 (ENSDORG00000015461)	Arsa (ENSDORG00000015460)	Shank3 (ENSDORG00000025224)	ENSDORG00000000006	Rabl2 (ENSDORG00000000003)	Pnpla3 (ENSDORG00000008107)	Pnpla5 (ENSDORG00000010083)	Sult4a1 (ENSDORG00000006724)	Efcab6 (ENSDORG00000008442)	Mpped1 (ENSDORG00000015196)	Scube1 (ENSDORG00000012643)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000160150 #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	132	TNPO1 (ENSCLAG00000016191)	FCHO2 (ENSCLAG00000009654)	TMEM171 (ENSCLAG00000009754)	TMEM174 (ENSCLAG00000009686)	BTF3 (ENSCLAG00000014499) ##27	ANKRA2 (ENSCLAG00000013134)	UTP15 (ENSCLAG00000016531)	ARHGEF28 (ENSCLAG00000011926)	ENC1 (ENSCLAG00000010345)	HEXB (ENSCLAG00000016006)	GFM2 (ENSCLAG00000013440)	NSA2 (ENSCLAG00000010179)	FAM169A (ENSCLAG00000009619)	ENSCLAG00000011385	GCNT4 (ENSCLAG00000010436)	ENSCLAG00000009641 #22	ANKRD31 (ENSCLAG00000011065)	HMGCR (ENSCLAG00000010132)	CERT1 (ENSCLAG00000011527)	POLK (ENSCLAG00000011236)	ANKDD1B (ENSCLAG00000010494)	POC5 (ENSCLAG00000009830)	SV2C (ENSCLAG00000013949)	F2RL2 (ENSCLAG00000012739)	IQGAP2 (ENSCLAG00000011435)	F2RL1 (ENSCLAG00000010304)	S100Z (ENSCLAG00000010354)	CRHBP (ENSCLAG00000009942)	AGGF1 (ENSCLAG00000012928)	PDE8B (ENSCLAG00000011619)	WDR41 (ENSCLAG00000010095)
Long-tailed chinchilla	MODERN SPECIES	120	MOV10L1 (ENSCLAG00000017288) #7	PANX2 (ENSCLAG00000017242) #8	TRABD (ENSCLAG00000017256) #9	SELENOO (ENSCLAG00000016415) #10	TUBGCP6 (ENSCLAG00000016687) #11	HDAC10 (ENSCLAG00000017266) #12	MAPK12 (ENSCLAG00000017046) #13	MAPK11 (ENSCLAG00000017044) #14	PLXNB2 (ENSCLAG00000016979) #15	DENND6B (ENSCLAG00000017052) #16	PPP6R2 (ENSCLAG00000017017) #17	SBF1 (ENSCLAG00000015857) #18	ADM2 (ENSCLAG00000017049) #19	MIOX (ENSCLAG00000017078) #20	LMF2 (ENSCLAG00000016656) #21	ENSCLAG00000017104 #22	SCO2 (ENSCLAG00000017200)	TYMP (ENSCLAG00000017041) #23	ODF3B (ENSCLAG00000017114)	SYCE3 (ENSCLAG00000017255) #24	CPT1B (ENSCLAG00000017252) #25	CHKB (ENSCLAG00000016876)	MAPK8IP2 (ENSCLAG00000017165)	ARSA (ENSCLAG00000017290)	SHANK3 (ENSCLAG00000017204)	ENSCLAG00000017149	ENSCLAG00000017218
Degu	MODERN SPECIES	194	PANX2 (ENSODEG00000015716) #8	TRABD (ENSODEG00000015551) #9	SELENOO (ENSODEG00000016393) #10	TUBGCP6 (ENSODEG00000015845) #11	ENSODEG00000015348 #12	MAPK12 (ENSODEG00000015663) #13	MAPK11 (ENSODEG00000015754) #14	ENSODEG00000016049 #15	ENSODEG00000015385 #15	DENND6B (ENSODEG00000016328) #16	PPP6R2 (ENSODEG00000015857) #17	SBF1 (ENSODEG00000015397) #18	ADM2 (ENSODEG00000015552) #19	MIOX (ENSODEG00000016023) #20	LMF2 (ENSODEG00000015351) #21	NCAPH2 (ENSODEG00000015562) #22	SCO2 (ENSODEG00000015748)	TYMP (ENSODEG00000016624) #23	ODF3B (ENSODEG00000015644)	ENSODEG00000015964	SYCE3 (ENSODEG00000015584) #24	ENSODEG00000016001 #25	ENSODEG00000016151 #25	CHKB (ENSODEG00000016746)	MAPK8IP2 (ENSODEG00000015596)	ARSA (ENSODEG00000015742)	SHANK3 (ENSODEG00000015758)	ENSODEG00000016242	ENSODEG00000015650	ENSODEG00000020388
Guinea pig	MODERN SPECIES	183	MOV10L1 (ENSCPOG00000002014) #7	PANX2 (ENSCPOG00000005860) #8	TRABD (ENSCPOG00000040468) #9	SELENOO (ENSCPOG00000014849) #10	TUBGCP6 (ENSCPOG00000014850) #11	ENSCPOG00000014856 #12	MAPK12 (ENSCPOG00000014859) #13	MAPK11 (ENSCPOG00000030297) #14	PLXNB2 (ENSCPOG00000014870) #15	DENND6B (ENSCPOG00000014874) #16	ENSCPOG00000034640	PPP6R2 (ENSCPOG00000013753) #17	SBF1 (ENSCPOG00000014104) #18	MIOX (ENSCPOG00000014279) #20	LMF2 (ENSCPOG00000005839) #21	NCAPH2 (ENSCPOG00000021481) #22	SCO2 (ENSCPOG00000026338)	TYMP (ENSCPOG00000021420) #23	ODF3B (ENSCPOG00000024753)	ENSCPOG00000029990	SYCE3 (ENSCPOG00000035980) #24	CPT1B (ENSCPOG00000007614) #25	CHKB (ENSCPOG00000007631)	MAPK8IP2 (ENSCPOG00000040518)	ARSA (ENSCPOG00000007416)	SHANK3 (ENSCPOG00000006983)	ACR (ENSCPOG00000008995)	ENSCPOG00000026899
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000160150.b #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000160150.b #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Alpin marmot	MODERN SPECIES	135	CRELD2 (ENSMMMG00000007552)	TTLL8 (ENSMMMG00000007470)	MLC1 (ENSMMMG00000007449)	MOV10L1 (ENSMMMG00000007395) #7	ENSMMMG00000007392 #8	TRABD (ENSMMMG00000007360) #9	SELENOO (ENSMMMG00000007224) #10	HDAC10 (ENSMMMG00000006995) #12	ENSMMMG00000006990 #13	ENSMMMG00000006982 #13	ENSMMMG00000006969 #14	PLXNB2 (ENSMMMG00000006871) #15	ENSMMMG00000006865 #16	PPP6R2 (ENSMMMG00000006816) #17	MIOX (ENSMMMG00000005543) #20	NCAPH2 (ENSMMMG00000005406) #22	TYMP (ENSMMMG00000005203) #23	ENSMMMG00000005199	SYCE3 (ENSMMMG00000005185) #24	CPT1B (ENSMMMG00000005156) #25	CHKB (ENSMMMG00000005141)	ENSMMMG00000005134	ARSA (ENSMMMG00000005119)	ENSMMMG00000005099	ENSMMMG00000005087	ENSMMMG00000005054
Marmotini_b	ANCESTRAL SPECIES	60	ENSGT00940000160150.b #7	ENSGT00940000153972.C #8	ENSGT00390000009067 #9	ENSGT00390000005508.a #10	ENSGT00940000157810 #11	ENSGT00940000160061 #12	ENSGT00940000156189 #13	ENSGT00940000160790 #14	ENSGT01020000230394.e.a.a.a #15	ENSGT00390000005529.b #16	ENSGT00390000009899.b #17	ENSGT00940000155263 #18	ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00530000063702.a #21	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT00940000160461	ENSGT00940000157610	ENSGT00940000153561.b.b	ENSGT00940000162430	ENSGT00940000156551
Arctic ground squirrel	MODERN SPECIES	581	TTLL8 (ENSUPAG00010005382)	MLC1 (ENSUPAG00010005397)	MOV10L1 (ENSUPAG00010005423) #7	PANX2 (ENSUPAG00010005495) #8	TRABD (ENSUPAG00010005513) #9	SELENOO (ENSUPAG00010005528) #10	TUBGCP6 (ENSUPAG00010005693) #11	MAPK12 (ENSUPAG00010005892) #13	MAPK11 (ENSUPAG00010005908) #14	PLXNB2 (ENSUPAG00010005922) #15	DENND6B (ENSUPAG00010005962) #16	PPP6R2 (ENSUPAG00010006007) #17	ADM2 (ENSUPAG00010006199) #19	MIOX (ENSUPAG00010006204) #20	LMF2 (ENSUPAG00010006213) #21	NCAPH2 (ENSUPAG00010006221) #22	SCO2 (ENSUPAG00010006259)	TYMP (ENSUPAG00010006263) #23	ODF3B (ENSUPAG00010006319)	ENSUPAG00010006327	SYCE3 (ENSUPAG00010006330) #24	CPT1B (ENSUPAG00010006338) #25	CHKB (ENSUPAG00010006349)	MAPK8IP2 (ENSUPAG00010006363)
Squirrel	MODERN SPECIES	229	MOV10L1 (ENSSTOG00000003747) #7	PANX2 (ENSSTOG00000022957) #8	TRABD (ENSSTOG00000015169) #9	SELENOO (ENSSTOG00000021258) #10	TUBGCP6 (ENSSTOG00000025992) #11	HDAC10 (ENSSTOG00000015253) #12	MAPK12 (ENSSTOG00000015261) #13	MAPK11 (ENSSTOG00000015274) #14	PLXNB2 (ENSSTOG00000024431) #15	DENND6B (ENSSTOG00000015282) #16	PPP6R2 (ENSSTOG00000014815) #17	SBF1 (ENSSTOG00000014827) #18	ADM2 (ENSSTOG00000029571) #19	MIOX (ENSSTOG00000020836) #20	LMF2 (ENSSTOG00000028688) #21	NCAPH2 (ENSSTOG00000022417) #22	SCO2 (ENSSTOG00000026780)	TYMP (ENSSTOG00000000281) #23	ODF3B (ENSSTOG00000028471)	SYCE3 (ENSSTOG00000024024) #24	CPT1B (ENSSTOG00000014192) #25	CHKB (ENSSTOG00000028511)	MAPK8IP2 (ENSSTOG00000025549)	ARSA (ENSSTOG00000024727)	SHANK3 (ENSSTOG00000029090)	ENSSTOG00000022660	ENSSTOG00000002723
Eurasian red squirrel	MODERN SPECIES	14	PANX2 (ENSSVLG00005008282) #8	TRABD (ENSSVLG00005008334) #9	SELENOO (ENSSVLG00005008372) #10	TUBGCP6 (ENSSVLG00005008386) #11	HDAC10 (ENSSVLG00005008461) #12	MAPK12 (ENSSVLG00005009443) #13	MAPK11 (ENSSVLG00005009538) #14	ENSSVLG00005009917	ENSSVLG00005009955 #15	ENSSVLG00005010067 #16	ENSSVLG00005010106 #16	PPP6R2 (ENSSVLG00005010231) #17	ADM2 (ENSSVLG00005011019) #19	ENSSVLG00005011054	MIOX (ENSSVLG00005011076) #20	NCAPH2 (ENSSVLG00005011493) #22	SCO2 (ENSSVLG00005011562)	TYMP (ENSSVLG00005003437) #23	ODF3B (ENSSVLG00005003492)	SYCE3 (ENSSVLG00005003600) #24	CPT1B (ENSSVLG00005003625) #25	CHKB (ENSSVLG00005003656)	MAPK8IP2 (ENSSVLG00005003679)	ARSA (ENSSVLG00005003692)	ENSSVLG00005003705	ENSSVLG00005003723	ENSSVLG00005003731	ENSSVLG00005003771
Lagomorpha	ANCESTRAL SPECIES	189											ENSGT00940000154380.a #19	ENSGT00390000016211 #20	ENSGT00940000155263 #18	ENSGT00530000063702.a #21	ENSGT01020000230616	ENSGT00390000014443 #22	ENSGT00390000004323.a	ENSGT00390000009250 #23	ENSGT00940000161995	ENSGT00940000163480	ENSGT00390000009978 #24	ENSGT01060000248595.b.a.a #25	ENSGT00950000182939.a.b.a	ENSGT01020000230860	ENSGT00940000160461	ENSGT00940000157610
Pika	MODERN SPECIES	5231														ENSOPRG00000002776 #18	LMF2 (ENSOPRG00000002862) #21	NCAPH2 (ENSOPRG00000002906) #22	TYMP (ENSOPRG00000002977) #23	ODF3B (ENSOPRG00000018227)	ENSOPRG00000002991	CPT1B (ENSOPRG00000002999) #25	CHKB (ENSOPRG00000003038)	MAPK8IP2 (ENSOPRG00000003066)
Rabbit	MODERN SPECIES	861											ENSOCUG00000032997 #19	MIOX (ENSOCUG00000028220) #20	LMF2 (ENSOCUG00000001397) #21	ENSOCUG00000031969	SCO2 (ENSOCUG00000034684)	NCAPH2 (ENSOCUG00000001401) #22	TYMP (ENSOCUG00000001408) #23	ENSOCUG00000027602	ENSOCUG00000039605	ENSOCUG00000015840	ENSOCUG00000010420