Glires	ANCESTRAL SPECIES	17	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00940000162635	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00940000162635	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00940000162635	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00940000162635	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37
Lesser Egyptian jerboa	MODERN SPECIES	171	Lime1 (ENSJJAG00000018995) #7	ENSJJAG00000018714 #8	Arfrp1 (ENSJJAG00000013827) #9	Rtel1 (ENSJJAG00000005487) #10	ENSJJAG00000023281 #11	Stmn3 (ENSJJAG00000023139) #12	ENSJJAG00000013900 #13	Gmeb2 (ENSJJAG00000022801) #14	Helz2 (ENSJJAG00000021775) #15	Fndc11 (ENSJJAG00000021148) #16	Srms (ENSJJAG00000020649) #17	Ptk6 (ENSJJAG00000020457) #18	Ppdpf (ENSJJAG00000020293) #19	Eef1a2 (ENSJJAG00000020185) #20	Kcnq2 (ENSJJAG00000019808) #21	Chrna4 (ENSJJAG00000018512) #22	ENSJJAG00000016700 #23	Arfgap1 (ENSJJAG00000015383) #24	Nkain4 (ENSJJAG00000014525) #25	Birc7 (ENSJJAG00000014210) #26	Ythdf1 (ENSJJAG00000013589) #27	Bhlhe23 (ENSJJAG00000013438) #28	ENSJJAG00000001169 #29	Slc17a9 (ENSJJAG00000000563) #30	Gid8 (ENSJJAG00000000120) #31	Dido1 (ENSJJAG00000022740) #32	ENSJJAG00000022001 #33	Col9a3 (ENSJJAG00000020792) #34	Ogfr (ENSJJAG00000020054) #35	Mrgbp (ENSJJAG00000019784) #36	Ntsr1 (ENSJJAG00000019264) #37
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00940000162635	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT00390000014718
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407.n #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C
Chinese hamster chok1gshd	MODERN SPECIES	363	ENSCGRG00001023546	Zbtb46 (ENSCGRG00001023433)	Lime1 (ENSCGRG00001016932) #7	Zgpat (ENSCGRG00001011442) #8	ENSCGRG00001001706 #9	Rtel1 (ENSCGRG00001015046) #10	Stmn3 (ENSCGRG00001003004) #12	Gmeb2 (ENSCGRG00001018755) #14	Helz2 (ENSCGRG00001016744) #15	Fndc11 (ENSCGRG00001014780) #16	Srms (ENSCGRG00001017493) #17	Ptk6 (ENSCGRG00001016711) #18	Ppdpf (ENSCGRG00001014557) #19	Eef1a2 (ENSCGRG00001013389) #20	Kcnq2 (ENSCGRG00001001207) #21	Chrna4 (ENSCGRG00001016463) #22	ENSCGRG00001008086 #23	Arfgap1 (ENSCGRG00001000341) #24	Nkain4 (ENSCGRG00001017529) #25	Birc7 (ENSCGRG00001017256) #26	Ythdf1 (ENSCGRG00001016568) #27	Bhlhe23 (ENSCGRG00001006715) #28	Slc17a9 (ENSCGRG00001016886) #30	Gid8 (ENSCGRG00001015095) #31	Dido1 (ENSCGRG00001011636) #32	Tcfl5 (ENSCGRG00001005121) #33	Col9a3 (ENSCGRG00001019417) #34	Ogfr (ENSCGRG00001018620) #35	Mrgbp (ENSCGRG00001017599) #36	Ntsr1 (ENSCGRG00001017131) #37	Slco4a1 (ENSCGRG00001013645)
Golden Hamster	MODERN SPECIES	664	Abhd16b (ENSMAUG00000009336)	Zbtb46 (ENSMAUG00000003658)	Lime1 (ENSMAUG00000018778) #7	Zgpat (ENSMAUG00000017248) #8	ENSMAUG00000006741 #9	Rtel1 (ENSMAUG00000021859) #10	Stmn3 (ENSMAUG00000021053) #12	Gmeb2 (ENSMAUG00000001339) #14	Helz2 (ENSMAUG00000000857) #15	Fndc11 (ENSMAUG00000005228) #16	Srms (ENSMAUG00000017526) #17	Ptk6 (ENSMAUG00000021245) #18	Ppdpf (ENSMAUG00000018881) #19	Eef1a2 (ENSMAUG00000007024) #20	Kcnq2 (ENSMAUG00000016622) #21	Chrna4 (ENSMAUG00000001465) #22	ENSMAUG00000021616 #23	Arfgap1 (ENSMAUG00000015799) #24	Nkain4 (ENSMAUG00000011539) #25	Birc7 (ENSMAUG00000019324) #26	Ythdf1 (ENSMAUG00000017660) #27	Bhlhe23 (ENSMAUG00000009252) #28	Slc17a9 (ENSMAUG00000019462) #30	Dido1 (ENSMAUG00000016487) #32	Tcfl5 (ENSMAUG00000015318) #33	Col9a3 (ENSMAUG00000012721) #34	Ogfr (ENSMAUG00000018534) #35	Mrgbp (ENSMAUG00000017237) #36	Ntsr1 (ENSMAUG00000017871) #37	Slco4a1 (ENSMAUG00000009594)	Gata5 (ENSMAUG00000004902)
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT00390000014718
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	357	Zbtb46 (ENSMOCG00000019212)	Lime1 (ENSMOCG00000020930) #7	Zgpat (ENSMOCG00000001324) #8	ENSMOCG00000003005 #9	Rtel1 (ENSMOCG00000006621) #10	Stmn3 (ENSMOCG00000002791) #12	Gmeb2 (ENSMOCG00000020432) #14	Helz2 (ENSMOCG00000016283) #15	Fndc11 (ENSMOCG00000019957) #16	Srms (ENSMOCG00000005339) #17	Ptk6 (ENSMOCG00000017863) #18	Ppdpf (ENSMOCG00000012754) #19	Eef1a2 (ENSMOCG00000015062) #20	Kcnq2 (ENSMOCG00000011486) #21	ENSMOCG00000019495 #22	ENSMOCG00000004769 #22	ENSMOCG00000022336 #23	Arfgap1 (ENSMOCG00000000921) #24	Nkain4 (ENSMOCG00000021378) #25	Birc7 (ENSMOCG00000007072) #26	Ythdf1 (ENSMOCG00000013573) #27	Bhlhe23 (ENSMOCG00000010535) #28	Slc17a9 (ENSMOCG00000021060) #30	Gid8 (ENSMOCG00000022789) #31	Dido1 (ENSMOCG00000016348) #32	Tcfl5 (ENSMOCG00000013113) #33	Col9a3 (ENSMOCG00000008409) #34	Ogfr (ENSMOCG00000014592) #35	Mrgbp (ENSMOCG00000000356) #36	Ntsr1 (ENSMOCG00000006208) #37	Slco4a1 (ENSMOCG00000018880)
Prairie vole	MODERN SPECIES	357	Abhd16b (ENSMOCG00000009364)	Zbtb46 (ENSMOCG00000019212)	Lime1 (ENSMOCG00000020930) #7	Zgpat (ENSMOCG00000001324) #8	ENSMOCG00000003005 #9	Rtel1 (ENSMOCG00000006621) #10	Stmn3 (ENSMOCG00000002791) #12	Gmeb2 (ENSMOCG00000020432) #14	Helz2 (ENSMOCG00000016283) #15	Fndc11 (ENSMOCG00000019957) #16	Srms (ENSMOCG00000005339) #17	Ptk6 (ENSMOCG00000017863) #18	Ppdpf (ENSMOCG00000012754) #19	Eef1a2 (ENSMOCG00000015062) #20	Kcnq2 (ENSMOCG00000011486) #21	ENSMOCG00000019495 #22	ENSMOCG00000004769 #22	ENSMOCG00000022336 #23	Arfgap1 (ENSMOCG00000000921) #24	Nkain4 (ENSMOCG00000021378) #25	Birc7 (ENSMOCG00000007072) #26	Ythdf1 (ENSMOCG00000013573) #27	Bhlhe23 (ENSMOCG00000010535) #28	Slc17a9 (ENSMOCG00000021060) #30	Gid8 (ENSMOCG00000022789) #31	Dido1 (ENSMOCG00000016348) #32	Tcfl5 (ENSMOCG00000013113) #33	Col9a3 (ENSMOCG00000008409) #34	Ogfr (ENSMOCG00000014592) #35	Mrgbp (ENSMOCG00000000356) #36	Ntsr1 (ENSMOCG00000006208) #37
Northern American deer mouse	MODERN SPECIES	17	Abhd16b (ENSPEMG00000016010)	Zbtb46 (ENSPEMG00000015286)	Lime1 (ENSPEMG00000013925) #7	Zgpat (ENSPEMG00000015676) #8	Arfrp1 (ENSPEMG00000027815) #9	Rtel1 (ENSPEMG00000011774) #10	Stmn3 (ENSPEMG00000009067) #12	Gmeb2 (ENSPEMG00000029904) #14	Helz2 (ENSPEMG00000016538) #15	Fndc11 (ENSPEMG00000019134) #16	Srms (ENSPEMG00000011231) #17	Ptk6 (ENSPEMG00000013137) #18	Ppdpf (ENSPEMG00000030332) #19	Eef1a2 (ENSPEMG00000007292) #20	Kcnq2 (ENSPEMG00000000964) #21	Chrna4 (ENSPEMG00000003527) #22	ENSPEMG00000003874 #23	Arfgap1 (ENSPEMG00000020266) #24	Nkain4 (ENSPEMG00000020232) #25	Birc7 (ENSPEMG00000020215) #26	Ythdf1 (ENSPEMG00000020199) #27	Bhlhe23 (ENSPEMG00000013766) #28	Slc17a9 (ENSPEMG00000020148) #30	Gid8 (ENSPEMG00000020136) #31	Dido1 (ENSPEMG00000020026) #32	Tcfl5 (ENSPEMG00000019973) #33	Col9a3 (ENSPEMG00000019951) #34	Ogfr (ENSPEMG00000019927) #35	Mrgbp (ENSPEMG00000030337) #36	Ntsr1 (ENSPEMG00000019912) #37	ENSPEMG00000031188
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT00390000014718
Mus	ANCESTRAL SPECIES	1	ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C
Mus_A	ANCESTRAL SPECIES		ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000162803	ENSGT00940000158060	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C
Steppe mouse	MODERN SPECIES	2762	Abhd16b (ENSMSIG00000012732)	Zbtb46 (ENSMSIG00000012738)	Lime1 (ENSMSIG00000012757) #7	Zgpat (ENSMSIG00000012783) #8	Arfrp1 (ENSMSIG00000012801) #9	Rtel1 (ENSMSIG00000012832) #10	Stmn3 (ENSMSIG00000013246) #12	Gmeb2 (ENSMSIG00000013265) #14	Helz2 (ENSMSIG00000013287) #15	Fndc11 (ENSMSIG00000013398) #16	Srms (ENSMSIG00000013408) #17	Ptk6 (ENSMSIG00000013435) #18	Ppdpf (ENSMSIG00000013448) #19	Eef1a2 (ENSMSIG00000013475) #20	Kcnq2 (ENSMSIG00000013491) #21	Chrna4 (ENSMSIG00000014109) #22	Col20a1 (ENSMSIG00000014136)	Arfgap1 (ENSMSIG00000014444) #24	Nkain4 (ENSMSIG00000014670) #25	Birc7 (ENSMSIG00000014718) #26	Ythdf1 (ENSMSIG00000014745) #27	ENSMSIG00000014799	Bhlhe23 (ENSMSIG00000014821) #28
spretus	MODERN SPECIES	11	Abhd16b (MGP_SPRETEiJ_G0025736)	Zbtb46 (MGP_SPRETEiJ_G0025735)	Lime1 (MGP_SPRETEiJ_G0025733) #7	Zgpat (MGP_SPRETEiJ_G0025732) #8	Arfrp1 (MGP_SPRETEiJ_G0025731) #9	Rtel1 (MGP_SPRETEiJ_G0025730) #10	Stmn3 (MGP_SPRETEiJ_G0025729) #12	Gmeb2 (MGP_SPRETEiJ_G0025728) #14	Helz2 (MGP_SPRETEiJ_G0025727) #15	Fndc11 (MGP_SPRETEiJ_G0025726) #16	Srms (MGP_SPRETEiJ_G0025725) #17	Ptk6 (MGP_SPRETEiJ_G0025724) #18	Ppdpf (MGP_SPRETEiJ_G0025723) #19	Eef1a2 (MGP_SPRETEiJ_G0025722) #20	Kcnq2 (MGP_SPRETEiJ_G0025721) #21	Chrna4 (MGP_SPRETEiJ_G0025720) #22	Col20a1 (MGP_SPRETEiJ_G0025719)	Arfgap1 (MGP_SPRETEiJ_G0025718) #24	Nkain4 (MGP_SPRETEiJ_G0025717) #25	Birc7 (MGP_SPRETEiJ_G0025716) #26	Ythdf1 (MGP_SPRETEiJ_G0025715) #27	Bhlhe23 (MGP_SPRETEiJ_G0025714) #28	Slc17a9 (MGP_SPRETEiJ_G0025713) #30	Gid8 (MGP_SPRETEiJ_G0025712) #31	Dido1 (MGP_SPRETEiJ_G0025711) #32	Tcfl5 (MGP_SPRETEiJ_G0025710) #33	Col9a3 (MGP_SPRETEiJ_G0025709) #34	Ogfr (MGP_SPRETEiJ_G0025708) #35	Mrgbp (MGP_SPRETEiJ_G0025707) #36	Ntsr1 (MGP_SPRETEiJ_G0025706) #37	Slco4a1 (MGP_SPRETEiJ_G0025705)
Mouse	MODERN SPECIES	11	Abhd16b (ENSMUSG00000055882)	Zbtb46 (ENSMUSG00000027583)	Lime1 (ENSMUSG00000090077) #7	Zgpat (ENSMUSG00000027582) #8	Arfrp1 (ENSMUSG00000038671) #9	Rtel1 (ENSMUSG00000038685) #10	Stmn3 (ENSMUSG00000027581) #12	Gmeb2 (ENSMUSG00000038705) #14	Helz2 (ENSMUSG00000027580) #15	Fndc11 (ENSMUSG00000047841) #16	Srms (ENSMUSG00000027579) #17	Ptk6 (ENSMUSG00000038751) #18	Ppdpf (ENSMUSG00000016344) #19	Eef1a2 (ENSMUSG00000016349) #20	Kcnq2 (ENSMUSG00000016346) #21	Chrna4 (ENSMUSG00000027577) #22	Col20a1 (ENSMUSG00000016356)	Arfgap1 (ENSMUSG00000027575) #24	Nkain4 (ENSMUSG00000027574) #25	Birc7 (ENSMUSG00000038840) #26	Ythdf1 (ENSMUSG00000038848) #27	Bhlhe23 (ENSMUSG00000045493) #28	Slc17a9 (ENSMUSG00000023393) #30	Gid8 (ENSMUSG00000027573) #31	Dido1 (ENSMUSG00000038914) #32	Tcfl5 (ENSMUSG00000038932) #33	Col9a3 (ENSMUSG00000027570) #34	Ogfr (ENSMUSG00000049401) #35	Mrgbp (ENSMUSG00000027569) #36	Ntsr1 (ENSMUSG00000027568) #37	Slco4a1 (ENSMUSG00000038963)
Shrew mouse	MODERN SPECIES	16	Abhd16b (MGP_PahariEiJ_G0026257)	Zbtb46 (MGP_PahariEiJ_G0026256)	Lime1 (MGP_PahariEiJ_G0026255) #7	Zgpat (MGP_PahariEiJ_G0026254) #8	Arfrp1 (MGP_PahariEiJ_G0026253) #9	Rtel1 (MGP_PahariEiJ_G0026252) #10	Stmn3 (MGP_PahariEiJ_G0026251) #12	Gmeb2 (MGP_PahariEiJ_G0026250) #14	Helz2 (MGP_PahariEiJ_G0026249) #15	Fndc11 (MGP_PahariEiJ_G0026248) #16	Srms (MGP_PahariEiJ_G0026247) #17	Ptk6 (MGP_PahariEiJ_G0026246) #18	Ppdpf (MGP_PahariEiJ_G0026245) #19	Eef1a2 (MGP_PahariEiJ_G0026244) #20	Kcnq2 (MGP_PahariEiJ_G0026243) #21	Chrna4 (MGP_PahariEiJ_G0026242) #22	Col20a1 (MGP_PahariEiJ_G0026241)	Arfgap1 (MGP_PahariEiJ_G0026240) #24	Nkain4 (MGP_PahariEiJ_G0026239) #25	Birc7 (MGP_PahariEiJ_G0026238) #26	Ythdf1 (MGP_PahariEiJ_G0026237) #27	Bhlhe23 (MGP_PahariEiJ_G0026236) #28	Slc17a9 (MGP_PahariEiJ_G0026235) #30	Gid8 (MGP_PahariEiJ_G0026234) #31	Dido1 (MGP_PahariEiJ_G0026233) #32	Tcfl5 (MGP_PahariEiJ_G0026232) #33	Col9a3 (MGP_PahariEiJ_G0026231) #34	Ogfr (MGP_PahariEiJ_G0026230) #35	Mrgbp (MGP_PahariEiJ_G0026229) #36	Ntsr1 (MGP_PahariEiJ_G0026228) #37	Slco4a1 (MGP_PahariEiJ_G0026227)
Rat	MODERN SPECIES	13	Dnajc5 (ENSRNOG00000015202)	Tpd52l2 (ENSRNOG00000015067)	Zbtb46 (ENSRNOG00000014592)	Lime1 (ENSRNOG00000049336) #7	Zgpat (ENSRNOG00000014235) #8	Arfrp1 (ENSRNOG00000013992) #9	Rtel1 (ENSRNOG00000027513) #10	Stmn3 (ENSRNOG00000013657) #12	Gmeb2 (ENSRNOG00000013339) #14	Helz2 (ENSRNOG00000013267) #15	Fndc11 (ENSRNOG00000013243) #16	Srms (ENSRNOG00000013003) #17	Ptk6 (ENSRNOG00000012987) #18	Ppdpf (ENSRNOG00000012722) #19	Eef1a2 (ENSRNOG00000011624) #21	Chrna4 (ENSRNOG00000011202) #22	Arfgap1 (ENSRNOG00000043150) #24	Col20a1 (ENSRNOG00000010326) #23	Nkain4 (ENSRNOG00000031834) #25	Birc7 (ENSRNOG00000043311) #26	Ythdf1 (ENSRNOG00000027015) #27	Bhlhe23 (ENSRNOG00000010312) #28	Slc17a9 (ENSRNOG00000010275) #30	Gid8 (ENSRNOG00000065606) #31	Dido1 (ENSRNOG00000009936) #32	Tcfl5 (ENSRNOG00000061199) #33	Col9a3 (ENSRNOG00000009531) #34	Ogfr (ENSRNOG00000009355) #35	Mrgbp (ENSRNOG00000059891) #36	Ntsr1 (ENSRNOG00000028708) #37	ENSRNOG00000064180
Upper Galilee mountains blind mole rat	MODERN SPECIES	1229	Zbtb46 (ENSNGAG00000015931)	Lime1 (ENSNGAG00000015127) #7	ENSNGAG00000014626 #8	Arfrp1 (ENSNGAG00000014373) #9	ENSNGAG00000014149	Rtel1 (ENSNGAG00000003665) #10	Stmn3 (ENSNGAG00000015941) #12	Gmeb2 (ENSNGAG00000015465) #14	Helz2 (ENSNGAG00000013840) #15	Fndc11 (ENSNGAG00000012749) #16	Srms (ENSNGAG00000012152) #17	Ptk6 (ENSNGAG00000010563) #18	Ppdpf (ENSNGAG00000009696) #19	Eef1a2 (ENSNGAG00000009003) #20	Kcnq2 (ENSNGAG00000020074) #21	Chrna4 (ENSNGAG00000016193) #22	Col20a1 (ENSNGAG00000011814)	Arfgap1 (ENSNGAG00000005117) #24	Nkain4 (ENSNGAG00000002013) #25	Birc7 (ENSNGAG00000000904) #26	Ythdf1 (ENSNGAG00000000334) #27	Bhlhe23 (ENSNGAG00000000159) #28	Slc17a9 (ENSNGAG00000020412) #30	Gid8 (ENSNGAG00000020229) #31	Dido1 (ENSNGAG00000018812) #32	Tcfl5 (ENSNGAG00000006700) #33	Col9a3 (ENSNGAG00000001500) #34	Ogfr (ENSNGAG00000000640) #35	Mrgbp (ENSNGAG00000021492) #36	Ntsr1 (ENSNGAG00000021420) #37	Slco4a1 (ENSNGAG00000021326)
Kangaroo rat	MODERN SPECIES	448	Dnajc5 (ENSDORG00000026811)	Tpd52l2 (ENSDORG00000003704)	Abhd16b (ENSDORG00000026158)	Zbtb46 (ENSDORG00000001367)	Lime1 (ENSDORG00000001366) #7	Zgpat (ENSDORG00000001360) #8	Arfrp1 (ENSDORG00000013488) #9	Rtel1 (ENSDORG00000013483) #10	Stmn3 (ENSDORG00000006916) #12	Gmeb2 (ENSDORG00000005599) #14	Helz2 (ENSDORG00000005596) #15	Fndc11 (ENSDORG00000005594) #16	Ptk6 (ENSDORG00000004529) #18	Eef1a2 (ENSDORG00000004854) #20	Kcnq2 (ENSDORG00000011128) #21	Chrna4 (ENSDORG00000023973) #22	ENSDORG00000015431 #23	Arfgap1 (ENSDORG00000010660) #24	Nkain4 (ENSDORG00000001799) #25	Birc7 (ENSDORG00000025467) #26	Ythdf1 (ENSDORG00000002879) #27	Gid8 (ENSDORG00000003411) #31	ENSDORG00000011113 #32	Tcfl5 (ENSDORG00000004511) #33	Col9a3 (ENSDORG00000004509) #34	ENSDORG00000030204 #35	ENSDORG00000027453 #36	Ntsr1 (ENSDORG00000025445) #37	Slco4a1 (ENSDORG00000001161)	ENSDORG00000026178	Rbbp8nl (ENSDORG00000007635)
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00940000158060	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000158060	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C	ENSGT00940000160139
Hystricomorpha_a	ANCESTRAL SPECIES	66	ENSGT00940000158060	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C	ENSGT00940000160139
Hystricomorpha_b	ANCESTRAL SPECIES	83	ENSGT00940000158060	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000153769.G #23	ENSGT00890000139515 #24	ENSGT00940000157989.b #25	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C	ENSGT00940000160139
Long-tailed chinchilla	MODERN SPECIES	235	ZBTB46 (ENSCLAG00000009288)	SLC2A4RG (ENSCLAG00000009004)	LIME1 (ENSCLAG00000003864) #7	ZGPAT (ENSCLAG00000004087) #8	ARFRP1 (ENSCLAG00000004200) #9	RTEL1 (ENSCLAG00000005519) #10	STMN3 (ENSCLAG00000004737) #12	GMEB2 (ENSCLAG00000005998) #14	HELZ2 (ENSCLAG00000006292) #15	FNDC11 (ENSCLAG00000005206) #16	SRMS (ENSCLAG00000005546) #17	PTK6 (ENSCLAG00000005884) #18	PPDPF (ENSCLAG00000005999) #19	EEF1A2 (ENSCLAG00000006710) #20	KCNQ2 (ENSCLAG00000004205) #21	CHRNA4 (ENSCLAG00000002115) #22	ENSCLAG00000002569 #23	ARFGAP1 (ENSCLAG00000003171) #24	NKAIN4 (ENSCLAG00000003530) #25	BIRC7 (ENSCLAG00000003588) #26	YTHDF1 (ENSCLAG00000005989) #27	SLC17A9 (ENSCLAG00000006378) #30	GID8 (ENSCLAG00000006562) #31	DIDO1 (ENSCLAG00000006615) #32	ENSCLAG00000007594 #33	ENSCLAG00000007710 #34	OGFR (ENSCLAG00000008130) #35	ENSCLAG00000002627 #36	NTSR1 (ENSCLAG00000002645) #37	SLCO4A1 (ENSCLAG00000007190)	CABLES2 (ENSCLAG00000007291)
Degu	MODERN SPECIES	235	SLC2A4RG (ENSODEG00000006508)	LIME1 (ENSODEG00000006535) #7	ZGPAT (ENSODEG00000006562) #8	ENSODEG00000006608	ARFRP1 (ENSODEG00000006629) #9	RTEL1 (ENSODEG00000006769) #10	STMN3 (ENSODEG00000007140) #12	ENSODEG00000007154 #14	HELZ2 (ENSODEG00000007200) #15	ENSODEG00000007298 #16	SRMS (ENSODEG00000007310) #17	PTK6 (ENSODEG00000007334) #18	PPDPF (ENSODEG00000003923) #19	EEF1A2 (ENSODEG00000003948) #20	KCNQ2 (ENSODEG00000004014) #21	CHRNA4 (ENSODEG00000004088) #22	ENSODEG00000004143 #23	ARFGAP1 (ENSODEG00000004250) #24	NKAIN4 (ENSODEG00000004313) #25	BIRC7 (ENSODEG00000004350) #26	ENSODEG00000004380 #27	SLC17A9 (ENSODEG00000004413) #30	ENSODEG00000004429 #31	DIDO1 (ENSODEG00000004463) #32	TCFL5 (ENSODEG00000004537) #33	ENSODEG00000004560	ENSODEG00000004588 #34	OGFR (ENSODEG00000004656) #35	MRGBP (ENSODEG00000004674) #36	NTSR1 (ENSODEG00000004689) #37	SLCO4A1 (ENSODEG00000004720)
Guinea pig	MODERN SPECIES	119	ABHD16B (ENSCPOG00000014395)	ZBTB46 (ENSCPOG00000002803)	SLC2A4RG (ENSCPOG00000035815)	ENSCPOG00000019294 #7	ZGPAT (ENSCPOG00000014427) #8	ARFRP1 (ENSCPOG00000038193) #9	RTEL1 (ENSCPOG00000014414) #10	STMN3 (ENSCPOG00000023626) #12	GMEB2 (ENSCPOG00000025567) #14	HELZ2 (ENSCPOG00000006905) #15	FNDC11 (ENSCPOG00000010652) #16	SRMS (ENSCPOG00000006895) #17	PTK6 (ENSCPOG00000006885) #18	EEF1A2 (ENSCPOG00000022072) #20	KCNQ2 (ENSCPOG00000006949) #21	CHRNA4 (ENSCPOG00000010559) #22	ENSCPOG00000021624	ARFGAP1 (ENSCPOG00000025055) #24	NKAIN4 (ENSCPOG00000005586) #25	BIRC7 (ENSCPOG00000020366) #26	YTHDF1 (ENSCPOG00000010202) #27	SLC17A9 (ENSCPOG00000001082) #30	GID8 (ENSCPOG00000007888) #31	DIDO1 (ENSCPOG00000004884) #32	TCFL5 (ENSCPOG00000020307) #33	ENSCPOG00000002720 #34	OGFR (ENSCPOG00000003143) #35	MRGBP (ENSCPOG00000020272) #36	NTSR1 (ENSCPOG00000033878) #37	SLCO4A1 (ENSCPOG00000015749)	GATA5 (ENSCPOG00000030979)
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00940000158060	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C	ENSGT00940000160139
Marmotini	ANCESTRAL SPECIES	5	ENSGT00940000158060	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C	ENSGT00940000160139
Marmotini_b	ANCESTRAL SPECIES	25	ENSGT00940000158060	ENSGT00940000162832	ENSGT00510000050080 #7	ENSGT00390000000732 #8	ENSGT00940000156407 #9	ENSGT00950000182970.A.b #10	ENSGT01030000234597.a.b.b.f #12	ENSGT00410000025596.a.a #14	ENSGT00940000160694 #15	ENSGT00390000006008 #16	ENSGT00940000161518 #17	ENSGT00940000161218 #18	ENSGT00390000009113.a.a #19	ENSGT00950000183029.C #20	ENSGT00940000160093 #21	ENSGT00940000159329 #22	ENSGT00940000163709	ENSGT00890000139515 #24	ENSGT00940000160406 #26	ENSGT00940000156911 #27	ENSGT00940000162992 #28	ENSGT00940000158186 #30	ENSGT00390000015162 #31	ENSGT00940000155532 #32	ENSGT00390000002821 #33	ENSGT00940000161930 #34	ENSGT00390000018730.A #35	ENSGT00390000007823 #36	ENSGT01100000263518.A.a.a.a #37	ENSGT01080000257410.C	ENSGT00940000160139
Squirrel	MODERN SPECIES	114	ZBTB46 (ENSSTOG00000012003)	SLC2A4RG (ENSSTOG00000024188)	ENSSTOG00000023660 #7	ZGPAT (ENSSTOG00000011986) #8	ARFRP1 (ENSSTOG00000011978) #9	RTEL1 (ENSSTOG00000011948) #10	STMN3 (ENSSTOG00000006830) #12	GMEB2 (ENSSTOG00000023031) #14	HELZ2 (ENSSTOG00000023572) #15	FNDC11 (ENSSTOG00000007853) #16	SRMS (ENSSTOG00000007835) #17	PTK6 (ENSSTOG00000007821) #18	PPDPF (ENSSTOG00000007808) #19	EEF1A2 (ENSSTOG00000028862) #20	KCNQ2 (ENSSTOG00000020023) #21	CHRNA4 (ENSSTOG00000028017) #22	COL20A1 (ENSSTOG00000014595)	ARFGAP1 (ENSSTOG00000022151) #24	BIRC7 (ENSSTOG00000034074) #26	YTHDF1 (ENSSTOG00000023001) #27	ENSSTOG00000030778 #28	SLC17A9 (ENSSTOG00000008798) #30	GID8 (ENSSTOG00000025077) #31	DIDO1 (ENSSTOG00000012318) #32	TCFL5 (ENSSTOG00000026350) #33	ENSSTOG00000021578 #34	ENSSTOG00000020474 #35	MRGBP (ENSSTOG00000012953) #36	NTSR1 (ENSSTOG00000026120) #37	SLCO4A1 (ENSSTOG00000019826)	GATA5 (ENSSTOG00000010454)
Arctic ground squirrel	MODERN SPECIES	580	ABHD16B (ENSUPAG00010003740)	ZBTB46 (ENSUPAG00010003742)	SLC2A4RG (ENSUPAG00010003756)	ZGPAT (ENSUPAG00010003773) #8	ENSUPAG00010003811 #9	RTEL1 (ENSUPAG00010003834) #10	STMN3 (ENSUPAG00010004560) #12	GMEB2 (ENSUPAG00010004569) #14	HELZ2 (ENSUPAG00010004576) #15	FNDC11 (ENSUPAG00010004587) #16	SRMS (ENSUPAG00010004602) #17	PTK6 (ENSUPAG00010004618) #18	PPDPF (ENSUPAG00010004632) #19	EEF1A2 (ENSUPAG00010004639) #20	KCNQ2 (ENSUPAG00010004658) #21	CHRNA4 (ENSUPAG00010004850) #22	COL20A1 (ENSUPAG00010004864)	ARFGAP1 (ENSUPAG00010005043) #24	BIRC7 (ENSUPAG00010005297) #26
Alpin marmot	MODERN SPECIES		ENSMMMG00000001114 #7	ZGPAT (ENSMMMG00000001152) #8	ENSMMMG00000001208	ARFRP1 (ENSMMMG00000001220) #9	RTEL1 (ENSMMMG00000001278) #10	STMN3 (ENSMMMG00000001758) #12	GMEB2 (ENSMMMG00000001787) #14	ENSMMMG00000001804	HELZ2 (ENSMMMG00000001816) #15	FNDC11 (ENSMMMG00000001907) #16	SRMS (ENSMMMG00000001913) #17	PTK6 (ENSMMMG00000001940) #18	PPDPF (ENSMMMG00000001957) #19	EEF1A2 (ENSMMMG00000001969) #20	KCNQ2 (ENSMMMG00000002019) #21	CHRNA4 (ENSMMMG00000002798) #22	COL20A1 (ENSMMMG00000002849)	ARFGAP1 (ENSMMMG00000003181) #24	BIRC7 (ENSMMMG00000003407) #26	YTHDF1 (ENSMMMG00000003425) #27	SLC17A9 (ENSMMMG00000003461) #30	GID8 (ENSMMMG00000003488) #31	DIDO1 (ENSMMMG00000003510) #32	TCFL5 (ENSMMMG00000003663) #33	ENSMMMG00000003673 #34	OGFR (ENSMMMG00000003753) #35	MRGBP (ENSMMMG00000003862) #36	NTSR1 (ENSMMMG00000003907) #37	SLCO4A1 (ENSMMMG00000003911)	GATA5 (ENSMMMG00000003966)	RBBP8NL (ENSMMMG00000004035)
Eurasian red squirrel	MODERN SPECIES	11	ENSSVLG00005011709	ZGPAT (ENSSVLG00005011600) #8	ARFRP1 (ENSSVLG00005011495) #9	RTEL1 (ENSSVLG00005011431) #10	STMN3 (ENSSVLG00005011307) #12	GMEB2 (ENSSVLG00005011239) #14	ENSSVLG00005011188	HELZ2 (ENSSVLG00005011029) #15	FNDC11 (ENSSVLG00005010998) #16	SRMS (ENSSVLG00005010852) #17	PTK6 (ENSSVLG00005010733) #18	PPDPF (ENSSVLG00005010700) #19	EEF1A2 (ENSSVLG00005004916) #20	KCNQ2 (ENSSVLG00005004604) #21	ENSSVLG00005004478	CHRNA4 (ENSSVLG00005004453) #22	ENSSVLG00005004184 #23	ARFGAP1 (ENSSVLG00005003989) #24	BIRC7 (ENSSVLG00005003913) #26	YTHDF1 (ENSSVLG00005003892) #27	BHLHE23 (ENSSVLG00005003872) #28	SLC17A9 (ENSSVLG00005003839) #30	GID8 (ENSSVLG00005003819) #31	ENSSVLG00005003753 #32	TCFL5 (ENSSVLG00005003713) #33	COL9A3 (ENSSVLG00005003650)	ENSSVLG00005003605 #35	MRGBP (ENSSVLG00005003577) #36	NTSR1 (ENSSVLG00005003558) #37	SLCO4A1 (ENSSVLG00005003525)	GATA5 (ENSSVLG00005003441)
Lagomorpha	ANCESTRAL SPECIES	473														ENSGT00950000183029.C #20	ENSGT00940000165345	ENSGT00940000159329 #22
Rabbit	MODERN SPECIES	1318																CHRNA4 (ENSOCUG00000002185) #22
Pika	MODERN SPECIES	4073														ENSOPRG00000005964 #20	ENSOPRG00000005943	CHRNA4 (ENSOPRG00000005933) #22