Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164881	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Glires	ANCESTRAL SPECIES	1	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164881	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164881	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Muroidea	ANCESTRAL SPECIES	2	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Murinae	ANCESTRAL SPECIES	1	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Mus	ANCESTRAL SPECIES	1	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309.j	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Mus_A	ANCESTRAL SPECIES		ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00860000136352 #23	ENSGT00940000153571.b #24	ENSGT00390000016309.j	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Ryukyu mouse	MODERN SPECIES	11	Commd9 (MGP_CAROLIEiJ_G0024005) #7	Ldlrad3 (MGP_CAROLIEiJ_G0024006) #8	Trim44 (MGP_CAROLIEiJ_G0024007) #9	Fjx1 (MGP_CAROLIEiJ_G0024008) #10	Pamr1 (MGP_CAROLIEiJ_G0024009) #11	Slc1a2 (MGP_CAROLIEiJ_G0024010) #12	Cd44 (MGP_CAROLIEiJ_G0024011) #13	Pdhx (MGP_CAROLIEiJ_G0024012) #14	Apip (MGP_CAROLIEiJ_G0024013) #15	Ehf (MGP_CAROLIEiJ_G0024014) #16	Elf5 (MGP_CAROLIEiJ_G0024015) #17	Cat (MGP_CAROLIEiJ_G0024016) #18	Abtb2 (MGP_CAROLIEiJ_G0024017) #19	MGP_CAROLIEiJ_G0024018 #20	Caprin1 (MGP_CAROLIEiJ_G0024019) #21	Lmo2 (MGP_CAROLIEiJ_G0024020) #22	MGP_CAROLIEiJ_G0024021 #23	Fbxo3 (MGP_CAROLIEiJ_G0024022) #24	A930018P22Rik (MGP_CAROLIEiJ_G0024023) #25	MGP_CAROLIEiJ_G0024024 #26	Hipk3 (MGP_CAROLIEiJ_G0024025) #27	Cstf3 (MGP_CAROLIEiJ_G0024026) #28	Tcp11l1 (MGP_CAROLIEiJ_G0024027) #29	Pin1rt1 (MGP_CAROLIEiJ_G0024028) #30	Depdc7 (MGP_CAROLIEiJ_G0024029) #31	Qser1 (MGP_CAROLIEiJ_G0024030) #32	Prrg4 (MGP_CAROLIEiJ_G0024031) #33	Ccdc73 (MGP_CAROLIEiJ_G0024032) #34	Eif3m (MGP_CAROLIEiJ_G0024033) #35	Wt1 (MGP_CAROLIEiJ_G0024034) #36	Them7 (MGP_CAROLIEiJ_G0024035) #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00860000136352 #23	ENSGT00940000153571.b #24	ENSGT00390000016309.j	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Mus_C	ANCESTRAL SPECIES		ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00860000136352 #23	ENSGT00940000153571.b #24	ENSGT00390000016309.j	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
spretus	MODERN SPECIES	11	Commd9 (MGP_SPRETEiJ_G0024915) #7	Ldlrad3 (MGP_SPRETEiJ_G0024916) #8	Trim44 (MGP_SPRETEiJ_G0024917) #9	Fjx1 (MGP_SPRETEiJ_G0024918) #10	Pamr1 (MGP_SPRETEiJ_G0024919) #11	Slc1a2 (MGP_SPRETEiJ_G0024920) #12	Cd44 (MGP_SPRETEiJ_G0024921) #13	Pdhx (MGP_SPRETEiJ_G0024922) #14	Apip (MGP_SPRETEiJ_G0024923) #15	Ehf (MGP_SPRETEiJ_G0024924) #16	Elf5 (MGP_SPRETEiJ_G0024925) #17	Cat (MGP_SPRETEiJ_G0024926) #18	Abtb2 (MGP_SPRETEiJ_G0024927) #19	Nat10 (MGP_SPRETEiJ_G0024928) #20	Caprin1 (MGP_SPRETEiJ_G0024929) #21	Lmo2 (MGP_SPRETEiJ_G0024930) #22	MGP_SPRETEiJ_G0024931 #23	Fbxo3 (MGP_SPRETEiJ_G0024932) #24	Cd59a (MGP_SPRETEiJ_G0024933)	A930018P22Rik (MGP_SPRETEiJ_G0024935) #25	D430041D05Rik (MGP_SPRETEiJ_G0024936) #26	Hipk3 (MGP_SPRETEiJ_G0024937) #27	MGP_SPRETEiJ_G0024938	Cstf3 (MGP_SPRETEiJ_G0024939) #28	Tcp11l1 (MGP_SPRETEiJ_G0024940) #29	Pin1rt1 (MGP_SPRETEiJ_G0024941) #30	Depdc7 (MGP_SPRETEiJ_G0024942) #31	Qser1 (MGP_SPRETEiJ_G0024943) #32	Prrg4 (MGP_SPRETEiJ_G0024944) #33	Ccdc73 (MGP_SPRETEiJ_G0024945) #34	Eif3m (MGP_SPRETEiJ_G0024946) #35
Steppe mouse	MODERN SPECIES	12	ENSMSIG00000004991	Trim44 (ENSMSIG00000005008) #9	Fjx1 (ENSMSIG00000005059) #10	Pamr1 (ENSMSIG00000005073) #11	Slc1a2 (ENSMSIG00000005100) #12	Cd44 (ENSMSIG00000005261) #13	Pdhx (ENSMSIG00000006094) #14	ENSMSIG00000006147 #15	Ehf (ENSMSIG00000006198) #16	Elf5 (ENSMSIG00000006297) #17	Cat (ENSMSIG00000006347) #18	Abtb2 (ENSMSIG00000006424) #19	ENSMSIG00000006529	Nat10 (ENSMSIG00000006539) #20	Caprin1 (ENSMSIG00000006606) #21	Lmo2 (ENSMSIG00000006713) #22	ENSMSIG00000006746 #23	Fbxo3 (ENSMSIG00000006767) #24
Mouse	MODERN SPECIES	11	Commd9 (ENSMUSG00000027163) #7	Ldlrad3 (ENSMUSG00000048058) #8	Trim44 (ENSMUSG00000027189) #9	Fjx1 (ENSMUSG00000075012) #10	Pamr1 (ENSMUSG00000027188) #11	Slc1a2 (ENSMUSG00000005089) #12	Cd44 (ENSMUSG00000005087) #13	Pdhx (ENSMUSG00000010914) #14	Apip (ENSMUSG00000010911) #15	Ehf (ENSMUSG00000012350) #16	Elf5 (ENSMUSG00000027186) #17	Cat (ENSMUSG00000027187) #18	Abtb2 (ENSMUSG00000032724) #19	Nat10 (ENSMUSG00000027185) #20	Caprin1 (ENSMUSG00000027184) #21	Lmo2 (ENSMUSG00000032698) #22	Fbxo3 (ENSMUSG00000027180) #24	Cd59b (ENSMUSG00000068686)	Cd59a (ENSMUSG00000032679)	A930018P22Rik (ENSMUSG00000032671) #25	D430041D05Rik (ENSMUSG00000068373) #26	Hipk3 (ENSMUSG00000027177) #27	Cstf3 (ENSMUSG00000027176) #28	Tcp11l1 (ENSMUSG00000027175) #29	Pin1rt1 (ENSMUSG00000074997) #30	Depdc7 (ENSMUSG00000027173) #31	Qser1 (ENSMUSG00000074994) #32	Prrg4 (ENSMUSG00000027171) #33	Ccdc73 (ENSMUSG00000045106) #34	Eif3m (ENSMUSG00000027170) #35	Wt1 (ENSMUSG00000016458) #36
Shrew mouse	MODERN SPECIES	16	Commd9 (MGP_PahariEiJ_G0025441) #7	Ldlrad3 (MGP_PahariEiJ_G0025442) #8	Trim44 (MGP_PahariEiJ_G0025443) #9	Fjx1 (MGP_PahariEiJ_G0025444) #10	Pamr1 (MGP_PahariEiJ_G0025445) #11	Slc1a2 (MGP_PahariEiJ_G0025446) #12	Cd44 (MGP_PahariEiJ_G0025447) #13	Pdhx (MGP_PahariEiJ_G0025448) #14	Apip (MGP_PahariEiJ_G0025449) #15	Ehf (MGP_PahariEiJ_G0025450) #16	Elf5 (MGP_PahariEiJ_G0025451) #17	Cat (MGP_PahariEiJ_G0025452) #18	Abtb2 (MGP_PahariEiJ_G0025453) #19	Nat10 (MGP_PahariEiJ_G0025454) #20	Caprin1 (MGP_PahariEiJ_G0025455) #21	Lmo2 (MGP_PahariEiJ_G0025456) #22	MGP_PahariEiJ_G0025457	Fbxo3 (MGP_PahariEiJ_G0025458) #24	MGP_PahariEiJ_G0025459	MGP_PahariEiJ_G0025460	A930018P22Rik (MGP_PahariEiJ_G0025461) #25	D430041D05Rik (MGP_PahariEiJ_G0025462) #26	Hipk3 (MGP_PahariEiJ_G0025463) #27	Cstf3 (MGP_PahariEiJ_G0025464) #28	Tcp11l1 (MGP_PahariEiJ_G0025465) #29	Pin1rt1 (MGP_PahariEiJ_G0025466) #30	Depdc7 (MGP_PahariEiJ_G0025467) #31	Qser1 (MGP_PahariEiJ_G0025468) #32	Prrg4 (MGP_PahariEiJ_G0025469) #33	Ccdc73 (MGP_PahariEiJ_G0025470) #34	Eif3m (MGP_PahariEiJ_G0025471) #35
Rat	MODERN SPECIES	13	Rpl21 (ENSRNOG00000069969)	Trim44 (ENSRNOG00000005191) #9	Fjx1 (ENSRNOG00000005347) #10	Pamr1 (ENSRNOG00000005348) #11	Slc1a2 (ENSRNOG00000005479) #12	Cd44 (ENSRNOG00000006094) #13	Pdhx (ENSRNOG00000006947) #14	Apip (ENSRNOG00000007446) #15	Ehf (ENSRNOG00000007484) #16	Elf5 (ENSRNOG00000008282) #17	Cat (ENSRNOG00000008364) #18	Abtb2 (ENSRNOG00000008510) #19	Nat10 (ENSRNOG00000008663) #20	Caprin1 (ENSRNOG00000009152) #21	ENSRNOG00000063191	Lmo2 (ENSRNOG00000009401) #22	Fbxo3 (ENSRNOG00000009549) #24	Cd59 (ENSRNOG00000042821)	RGD1563222 (ENSRNOG00000010963) #25	LOC100362814 (ENSRNOG00000011132) #26	Hipk3 (ENSRNOG00000011358) #27	Cstf3 (ENSRNOG00000012089) #28	Tcp11l1 (ENSRNOG00000042576) #29	Depdc7 (ENSRNOG00000012262) #31	Qser1 (ENSRNOG00000037514) #32	Prrg4 (ENSRNOG00000022710) #33	RGD1560017 (ENSRNOG00000029262)	Ccdc73 (ENSRNOG00000022660) #34	Eif3m (ENSRNOG00000012738) #35	ENSRNOG00000067112	Wt1 (ENSRNOG00000013074) #36
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000160574 #8	ENSGT00550000074784.a.b	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Chinese hamster chok1gshd	MODERN SPECIES	188	Ldlrad3 (ENSCGRG00001024912) #8	ENSCGRG00001024835	Trim44 (ENSCGRG00001024631) #9	Fjx1 (ENSCGRG00001010732) #10	Pamr1 (ENSCGRG00001023148) #11	Slc1a2 (ENSCGRG00001023537) #12	Cd44 (ENSCGRG00001022042) #13	Pdhx (ENSCGRG00001020048) #14	APIP (ENSCGRG00001019435) #15	Ehf (ENSCGRG00001018872) #16	Elf5 (ENSCGRG00001017703) #17	Cat (ENSCGRG00001022758) #18	Abtb2 (ENSCGRG00001022262) #19	NAT10 (ENSCGRG00001010534) #20	Caprin1 (ENSCGRG00001006383) #21	Lmo2 (ENSCGRG00001003942) #22	ENSCGRG00001002101	Fbxo3 (ENSCGRG00001019997) #24	ENSCGRG00001019416	A930018P22Rik (ENSCGRG00001018837) #25	D430041D05Rik (ENSCGRG00001017776) #26	Hipk3 (ENSCGRG00001016245) #27	Cstf3 (ENSCGRG00001014773) #28	Tcp11l1 (ENSCGRG00001000909) #29	Depdc7 (ENSCGRG00001023950) #31	Qser1 (ENSCGRG00001023779) #32	Prrg4 (ENSCGRG00001023311) #33	ENSCGRG00001023007	EIF3M (ENSCGRG00001022289) #35	Wt1 (ENSCGRG00001005125) #36	Them7 (ENSCGRG00001001622) #37
Golden Hamster	MODERN SPECIES	618	ENSMAUG00000010071	Trim44 (ENSMAUG00000008730) #9	Fjx1 (ENSMAUG00000002426) #10	Pamr1 (ENSMAUG00000007447) #11	Slc1a2 (ENSMAUG00000008324) #12	Cd44 (ENSMAUG00000004546) #13	Pdhx (ENSMAUG00000002883) #14	Apip (ENSMAUG00000001671) #15	Ehf (ENSMAUG00000004776) #16	Elf5 (ENSMAUG00000003650) #17	Cat (ENSMAUG00000012493) #18	Abtb2 (ENSMAUG00000011208) #19	ENSMAUG00000010653 #20	ENSMAUG00000010029 #20	Caprin1 (ENSMAUG00000008906) #21	Lmo2 (ENSMAUG00000006848) #22	ENSMAUG00000005850 #24	ENSMAUG00000003722	A930018P22Rik (ENSMAUG00000002950) #25	D430041D05Rik (ENSMAUG00000010328) #26	Hipk3 (ENSMAUG00000006713) #27	Cstf3 (ENSMAUG00000002487) #28	Tcp11l1 (ENSMAUG00000021339) #29	Depdc7 (ENSMAUG00000004610) #31	Qser1 (ENSMAUG00000003616) #32	Prrg4 (ENSMAUG00000002732) #33	ENSMAUG00000009063 #34	Eif3m (ENSMAUG00000007848) #35	Wt1 (ENSMAUG00000008036) #36	Them7 (ENSMAUG00000004067) #37	Rcn1 (ENSMAUG00000003393)
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37	ENSGT01010000222360.D.b
Prairie vole	MODERN SPECIES	81	Ldlrad3 (ENSMOCG00000000619) #8	Trim44 (ENSMOCG00000006259) #9	Fjx1 (ENSMOCG00000004525) #10	Pamr1 (ENSMOCG00000003031) #11	Slc1a2 (ENSMOCG00000022434) #12	Cd44 (ENSMOCG00000021544) #13	Pdhx (ENSMOCG00000021084) #14	Apip (ENSMOCG00000015378) #15	Ehf (ENSMOCG00000003108) #16	Elf5 (ENSMOCG00000021785) #17	Cat (ENSMOCG00000019198) #18	Abtb2 (ENSMOCG00000013912) #19	Nat10 (ENSMOCG00000021454) #20	Caprin1 (ENSMOCG00000020128) #21	ENSMOCG00000018784	Lmo2 (ENSMOCG00000003531) #22	Fbxo3 (ENSMOCG00000022595) #24	ENSMOCG00000003094	A930018P22Rik (ENSMOCG00000013797) #25	D430041D05Rik (ENSMOCG00000003074) #26	Hipk3 (ENSMOCG00000002204) #27	Cstf3 (ENSMOCG00000017583) #28	Tcp11l1 (ENSMOCG00000017298) #29	Depdc7 (ENSMOCG00000016709) #31	Qser1 (ENSMOCG00000001478) #32	Muc15 (ENSMOCG00000015142)	Ano3 (ENSMOCG00000021978)	Slc5a12 (ENSMOCG00000015104)	Fibin (ENSMOCG00000009161)	Bbox1 (ENSMOCG00000001592)	Ccdc34 (ENSMOCG00000007200)
Northern American deer mouse	MODERN SPECIES	17	Ldlrad3 (ENSPEMG00000010990) #8	Trim44 (ENSPEMG00000030265) #9	Fjx1 (ENSPEMG00000005586) #10	Pamr1 (ENSPEMG00000012941) #11	Slc1a2 (ENSPEMG00000010827) #12	Cd44 (ENSPEMG00000020598) #13	Pdhx (ENSPEMG00000015465) #14	Apip (ENSPEMG00000012212) #15	Ehf (ENSPEMG00000016561) #16	ENSPEMG00000015756	Elf5 (ENSPEMG00000004489) #17	Cat (ENSPEMG00000005139) #18	Abtb2 (ENSPEMG00000014140) #19	Nat10 (ENSPEMG00000009451) #20	Caprin1 (ENSPEMG00000009832) #21	Lmo2 (ENSPEMG00000000075) #22	Fbxo3 (ENSPEMG00000018420) #24	ENSPEMG00000026456	A930018P22Rik (ENSPEMG00000000170) #25	D430041D05Rik (ENSPEMG00000020969) #26	Hipk3 (ENSPEMG00000000900) #27	Cstf3 (ENSPEMG00000011481) #28	Tcp11l1 (ENSPEMG00000017123) #29	Depdc7 (ENSPEMG00000015544) #31	Qser1 (ENSPEMG00000008956) #32	Prrg4 (ENSPEMG00000017500) #33	ENSPEMG00000015426 #34	Eif3m (ENSPEMG00000011786) #35	Wt1 (ENSPEMG00000001292) #36	Them7 (ENSPEMG00000010578) #37	Rcn1 (ENSPEMG00000005747)
Upper Galilee mountains blind mole rat	MODERN SPECIES	492																Lmo2 (ENSNGAG00000022369) #22	Fbxo3 (ENSNGAG00000008081) #24	ENSNGAG00000023376	A930018P22Rik (ENSNGAG00000021497) #25	D430041D05Rik (ENSNGAG00000018241) #26	ENSNGAG00000013144 #27	Cstf3 (ENSNGAG00000010677) #28	Tcp11l1 (ENSNGAG00000020531) #29	Depdc7 (ENSNGAG00000021367) #31	Qser1 (ENSNGAG00000023077) #32	Prrg4 (ENSNGAG00000021040) #33	ENSNGAG00000023669	Eif3m (ENSNGAG00000006519) #35	Wt1 (ENSNGAG00000022234) #36	Them7 (ENSNGAG00000017585) #37	Rcn1 (ENSNGAG00000015767)
Lesser Egyptian jerboa	MODERN SPECIES	79	ENSJJAG00000004045	Traf6 (ENSJJAG00000019637)	ENSJJAG00000024040	ENSJJAG00000009576 #7	Pamr1 (ENSJJAG00000002115) #11	ENSJJAG00000012579 #12	ENSJJAG00000017687 #12	ENSJJAG00000024031 #13	Pdhx (ENSJJAG00000007859) #14	ENSJJAG00000011063 #15	Ehf (ENSJJAG00000023839) #16	Elf5 (ENSJJAG00000003357) #17	Cat (ENSJJAG00000012897) #18	Abtb2 (ENSJJAG00000014143) #19	Nat10 (ENSJJAG00000023042) #20	Lmo2 (ENSJJAG00000020848) #22	Fbxo3 (ENSJJAG00000022887) #24	D430041D05Rik (ENSJJAG00000019415) #26	Hipk3 (ENSJJAG00000000303) #27	Cstf3 (ENSJJAG00000018430) #28	Tcp11l1 (ENSJJAG00000002396) #29	Ccdc73 (ENSJJAG00000021731) #34	Eif3m (ENSJJAG00000011546) #35	ENSJJAG00000016942	Pax6 (ENSJJAG00000011854)	Elp4 (ENSJJAG00000020242)	Immp1l (ENSJJAG00000022649)	ENSJJAG00000023854	ENSJJAG00000024039	Mpped2 (ENSJJAG00000003402)	Fshb (ENSJJAG00000011959)
Kangaroo rat	MODERN SPECIES	365	Ldlrad3 (ENSDORG00000027771) #8	Trim44 (ENSDORG00000003756) #9	Fjx1 (ENSDORG00000028183) #10	Pamr1 (ENSDORG00000009499) #11	ENSDORG00000023527	Slc1a2 (ENSDORG00000014749) #12	ENSDORG00000014748 #13	Pdhx (ENSDORG00000006342) #14	Apip (ENSDORG00000006346) #15	Ehf (ENSDORG00000007642) #16	Elf5 (ENSDORG00000029279) #17	Cat (ENSDORG00000007636) #18	Abtb2 (ENSDORG00000006572) #19	Nat10 (ENSDORG00000006567) #20	Caprin1 (ENSDORG00000006566) #21	Lmo2 (ENSDORG00000010406) #22	Fbxo3 (ENSDORG00000008866) #24	ENSDORG00000026857	A930018P22Rik (ENSDORG00000008868) #25	ENSDORG00000024985	D430041D05Rik (ENSDORG00000012272) #26	Hipk3 (ENSDORG00000008654) #27	Cstf3 (ENSDORG00000005898) #28	Tcp11l1 (ENSDORG00000005896) #29	Depdc7 (ENSDORG00000006010) #31	Qser1 (ENSDORG00000011190) #32	Prrg4 (ENSDORG00000011188) #33	Ccdc73 (ENSDORG00000004144) #34	ENSDORG00000004141 #35	Wt1 (ENSDORG00000013725) #36	Them7 (ENSDORG00000029154) #37
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164881	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.b #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164077.c.a.b	ENSGT00940000164129.b.b	ENSGT00940000164776	ENSGT00950000182857.a.a.a	ENSGT00940000155733.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.b #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164776	ENSGT00950000182857.a.a.a	ENSGT00940000155733.a.a	ENSGT00940000160892	ENSGT01030000234588.b.b.b.b.a
Guinea pig	MODERN SPECIES	92	COMMD9 (ENSCPOG00000010648) #7	LDLRAD3 (ENSCPOG00000035009) #8	TRIM44 (ENSCPOG00000011263) #9	FJX1 (ENSCPOG00000022249) #10	PAMR1 (ENSCPOG00000007812) #11	SLC1A2 (ENSCPOG00000007801) #12	CD44 (ENSCPOG00000007792) #13	PDHX (ENSCPOG00000003099) #14	APIP (ENSCPOG00000003097) #15	EHF (ENSCPOG00000012596) #16	ELF5 (ENSCPOG00000012593) #17	CAT (ENSCPOG00000012582) #18	ABTB2 (ENSCPOG00000020779) #19	NAT10 (ENSCPOG00000015736) #20	CAPRIN1 (ENSCPOG00000015734) #21	LMO2 (ENSCPOG00000026645) #22	FBXO3 (ENSCPOG00000013568) #24	C11orf91 (ENSCPOG00000023939) #25	KIAA1549L (ENSCPOG00000005350) #26	HIPK3 (ENSCPOG00000002078) #27	CSTF3 (ENSCPOG00000005545) #28	TCP11L1 (ENSCPOG00000019920) #29	DEPDC7 (ENSCPOG00000014540) #31	QSER1 (ENSCPOG00000012681) #32	PRRG4 (ENSCPOG00000036780) #33	ENSCPOG00000002237	ENSCPOG00000039157	ENSCPOG00000033210	ENSCPOG00000037447	ENSCPOG00000031373	ENSCPOG00000033019
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.b #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164776	ENSGT00940000164129.b.b	ENSGT00950000182857.a.a.a	ENSGT00940000155733.a.a	ENSGT00940000160892
Degu	MODERN SPECIES	59	ENSODEG00000016254	PAMR1 (ENSODEG00000016795) #11	SLC1A2 (ENSODEG00000016926) #12	ENSODEG00000016446 #13	PDHX (ENSODEG00000016591) #14	ENSODEG00000016598	ENSODEG00000016570 #15	EHF (ENSODEG00000017375) #16	ELF5 (ENSODEG00000016572) #17	CAT (ENSODEG00000016770) #18	ENSODEG00000016618	ABTB2 (ENSODEG00000016924) #19	NAT10 (ENSODEG00000017069) #20	CAPRIN1 (ENSODEG00000016723) #21	ENSODEG00000020372	LMO2 (ENSODEG00000016866) #22	FBXO3 (ENSODEG00000016802) #24	ENSODEG00000016777	C11orf91 (ENSODEG00000016808) #25	KIAA1549L (ENSODEG00000017186) #26	ENSODEG00000017088	HIPK3 (ENSODEG00000017164) #27	ENSODEG00000016631	ENSODEG00000016737 #28	TCP11L1 (ENSODEG00000017087) #29	DEPDC7 (ENSODEG00000016692) #31	QSER1 (ENSODEG00000016682) #32	ENSODEG00000020396	PRRG4 (ENSODEG00000016931) #33	ENSODEG00000016794	ENSODEG00000017179
Long-tailed chinchilla	MODERN SPECIES	129	COMMD9 (ENSCLAG00000014761) #7	LDLRAD3 (ENSCLAG00000013692) #8	TRIM44 (ENSCLAG00000014212) #9	FJX1 (ENSCLAG00000014978) #10	PAMR1 (ENSCLAG00000014744) #11	SLC1A2 (ENSCLAG00000014237) #12	ENSCLAG00000015376 #13	PDHX (ENSCLAG00000014466) #14	APIP (ENSCLAG00000014703) #15	EHF (ENSCLAG00000017235) #16	ELF5 (ENSCLAG00000013934) #17	CAT (ENSCLAG00000013690) #18	ABTB2 (ENSCLAG00000014834) #19	NAT10 (ENSCLAG00000016692) #20	ENSCLAG00000015468 #21	LMO2 (ENSCLAG00000015594) #22	FBXO3 (ENSCLAG00000015193) #24	ENSCLAG00000014692	C11orf91 (ENSCLAG00000015126) #25	KIAA1549L (ENSCLAG00000014544) #26	HIPK3 (ENSCLAG00000015597) #27	CSTF3 (ENSCLAG00000016179) #28	TCP11L1 (ENSCLAG00000014173) #29	DEPDC7 (ENSCLAG00000014529) #31	QSER1 (ENSCLAG00000015487) #32	PRRG4 (ENSCLAG00000015908) #33	ENSCLAG00000014901	ENSCLAG00000015090	ENSCLAG00000015802	ENSCLAG00000014871	ENSCLAG00000016589
Naked mole-rat female	MODERN SPECIES	14	SLC1A2 (ENSHGLG00000010072) #12	CD44 (ENSHGLG00000011767) #13	ENSHGLG00000047526	ENSHGLG00000040571	ENSHGLG00000010978 #14	APIP (ENSHGLG00000011839) #15	EHF (ENSHGLG00000009758) #16	ELF5 (ENSHGLG00000011019) #17	CAT (ENSHGLG00000011741) #18	ENSHGLG00000016446 #19	NAT10 (ENSHGLG00000016891) #20	ENSHGLG00000018658 #21	ENSHGLG00000009842	ENSHGLG00000006506	ENSHGLG00000035097	ENSHGLG00000048933 #22	ENSHGLG00000013910 #26	ENSHGLG00000044243	HIPK3 (ENSHGLG00000018314) #27	ENSHGLG00000040843	CSTF3 (ENSHGLG00000017834) #28	TCP11L1 (ENSHGLG00000018599) #29	ENSHGLG00000018618 #31	ENSHGLG00000044852	ENSHGLG00000046320	QSER1 (ENSHGLG00000015709) #32	ENSHGLG00000043439 #33	ENSHGLG00000041603	ENSHGLG00000014399	ENSHGLG00000036247	ENSHGLG00000035268
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605.f.a #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164881	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Marmotini	ANCESTRAL SPECIES	22	ENSGT00530000063981.b	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605.f.a #9	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140.g #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164881	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00530000063981.b	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605.f.a #9	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140.g #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00950000182976.a.b #31	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164881	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Arctic ground squirrel	MODERN SPECIES	10	PRR5L (ENSUPAG00010001016)	COMMD9 (ENSUPAG00010001008) #7	LDLRAD3 (ENSUPAG00010000987) #8	ENSUPAG00010000969 #9	PAMR1 (ENSUPAG00010000955) #11	SLC1A2 (ENSUPAG00010000901) #12	CD44 (ENSUPAG00010000106) #13	PDHX (ENSUPAG00010000084) #14	APIP (ENSUPAG00010000057) #15	EHF (ENSUPAG00010019516) #16	ELF5 (ENSUPAG00010019491) #17	CAT (ENSUPAG00010019472) #18	ABTB2 (ENSUPAG00010019465) #19	NAT10 (ENSUPAG00010019438) #20	CAPRIN1 (ENSUPAG00010019403) #21	LMO2 (ENSUPAG00010019388) #22	FBXO3 (ENSUPAG00010019358) #24	ENSUPAG00010019350	C11orf91 (ENSUPAG00010019347) #25	KIAA1549L (ENSUPAG00010019291) #26	HIPK3 (ENSUPAG00010019217) #27	CSTF3 (ENSUPAG00010019186) #28	DEPDC7 (ENSUPAG00010019164) #31	QSER1 (ENSUPAG00010019111) #32	PRRG4 (ENSUPAG00010019105) #33	ENSUPAG00010019098	CCDC73 (ENSUPAG00010019088) #34	EIF3M (ENSUPAG00010019056) #35	WT1 (ENSUPAG00010018940) #36	ENSUPAG00010018932 #37	RCN1 (ENSUPAG00010018924)
Squirrel	MODERN SPECIES	133	PRR5L (ENSSTOG00000022180)	COMMD9 (ENSSTOG00000007267) #7	LDLRAD3 (ENSSTOG00000007228) #8	TRIM44 (ENSSTOG00000023760) #9	PAMR1 (ENSSTOG00000000826) #11	SLC1A2 (ENSSTOG00000000822) #12	ENSSTOG00000000813 #13	PDHX (ENSSTOG00000004403) #14	APIP (ENSSTOG00000004390) #15	ENSSTOG00000008622 #16	ELF5 (ENSSTOG00000008610) #17	CAT (ENSSTOG00000008595) #18	ABTB2 (ENSSTOG00000001839) #19	ENSSTOG00000001817 #20	CAPRIN1 (ENSSTOG00000006945) #21	LMO2 (ENSSTOG00000024319) #22	FBXO3 (ENSSTOG00000016405) #24	ENSSTOG00000011395	C11orf91 (ENSSTOG00000026942) #25	KIAA1549L (ENSSTOG00000011381) #26	HIPK3 (ENSSTOG00000009714) #27	CSTF3 (ENSSTOG00000013306) #28	TCP11L1 (ENSSTOG00000013296) #29	DEPDC7 (ENSSTOG00000013289) #31	QSER1 (ENSSTOG00000027161) #32	PRRG4 (ENSSTOG00000002830) #33	ENSSTOG00000024817 #34	EIF3M (ENSSTOG00000010502) #35	WT1 (ENSSTOG00000023716) #36	ENSSTOG00000034266 #37	ENSSTOG00000008930
Alpin marmot	MODERN SPECIES	3	PRR5L (ENSMMMG00000011238)	COMMD9 (ENSMMMG00000011235) #7	LDLRAD3 (ENSMMMG00000011216) #8	TRIM44 (ENSMMMG00000011195) #9	PAMR1 (ENSMMMG00000011162) #11	SLC1A2 (ENSMMMG00000011014) #12	CD44 (ENSMMMG00000010323) #13	PDHX (ENSMMMG00000010279) #14	APIP (ENSMMMG00000010262) #15	EHF (ENSMMMG00000010179) #16	ELF5 (ENSMMMG00000010124) #17	CAT (ENSMMMG00000010087) #18	ABTB2 (ENSMMMG00000010060) #19	NAT10 (ENSMMMG00000009992) #20	CAPRIN1 (ENSMMMG00000008164) #21	LMO2 (ENSMMMG00000008095) #22	FBXO3 (ENSMMMG00000008035) #24	ENSMMMG00000008026	C11orf91 (ENSMMMG00000008017) #25	KIAA1549L (ENSMMMG00000007942) #26	HIPK3 (ENSMMMG00000007810) #27	ENSMMMG00000007795	CSTF3 (ENSMMMG00000007765) #28	TCP11L1 (ENSMMMG00000007740) #29	QSER1 (ENSMMMG00000007677) #32	PRRG4 (ENSMMMG00000007662) #33	ENSMMMG00000007642	CCDC73 (ENSMMMG00000007616) #34	EIF3M (ENSMMMG00000007588) #35	WT1 (ENSMMMG00000007507) #36	ENSMMMG00000007498 #37
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005019782 #9	ENSSVLG00005019851	FJX1 (ENSSVLG00005019889) #10	PAMR1 (ENSSVLG00005019988) #11	SLC1A2 (ENSSVLG00005020571) #12	CD44 (ENSSVLG00005021288) #13	PDHX (ENSSVLG00005021554) #14	APIP (ENSSVLG00005021719) #15	ENSSVLG00005021768 #16	ELF5 (ENSSVLG00005021853) #17	CAT (ENSSVLG00005022137) #18	ENSSVLG00005022214	ABTB2 (ENSSVLG00005004819) #19	NAT10 (ENSSVLG00005004900) #20	CAPRIN1 (ENSSVLG00005004951) #21	LMO2 (ENSSVLG00005005066) #22	FBXO3 (ENSSVLG00005005111) #24	ENSSVLG00005005193	C11orf91 (ENSSVLG00005005211) #25	KIAA1549L (ENSSVLG00005005254) #26	HIPK3 (ENSSVLG00005005422) #27	ENSSVLG00005005475	CSTF3 (ENSSVLG00005005518) #28	TCP11L1 (ENSSVLG00005005675) #29	DEPDC7 (ENSSVLG00005005722) #31	QSER1 (ENSSVLG00005005823) #32	PRRG4 (ENSSVLG00005005895) #33	CCDC73 (ENSSVLG00005005944) #34	EIF3M (ENSSVLG00005006089) #35	WT1 (ENSSVLG00005006232) #36	ENSSVLG00005006549 #37
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00390000006218 #7	ENSGT00940000160574 #8	ENSGT00440000034605 #9	ENSGT00390000016768 #10	ENSGT00940000154234.a #11	ENSGT00940000155379 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309	ENSGT00390000002169 #25	ENSGT01030000240070	ENSGT00530000063472.b.b.a.b #26	ENSGT00940000155960.b #27	ENSGT00390000006758.b #28	ENSGT00940000157402 #29	ENSGT00440000037417.A #32	ENSGT00940000158268.a #33	ENSGT00940000164881	ENSGT00390000013482 #34	ENSGT00390000004456 #35	ENSGT00940000156734 #36	ENSGT00730000111983 #37
Rabbit	MODERN SPECIES		COMMD9 (ENSOCUG00000015674) #7	LDLRAD3 (ENSOCUG00000026068) #8	TRIM44 (ENSOCUG00000003818) #9	FJX1 (ENSOCUG00000026770) #10	PAMR1 (ENSOCUG00000000721) #11	SLC1A2 (ENSOCUG00000000718) #12	CD44 (ENSOCUG00000000715) #13	PDHX (ENSOCUG00000008004) #14	APIP (ENSOCUG00000021141) #15	EHF (ENSOCUG00000010261) #16	ELF5 (ENSOCUG00000014207) #17	CAT (ENSOCUG00000014198) #18	ABTB2 (ENSOCUG00000001405) #19	NAT10 (ENSOCUG00000001398) #20	CAPRIN1 (ENSOCUG00000024887) #21	LMO2 (ENSOCUG00000001532) #22	ENSOCUG00000014606 #24	ENSOCUG00000038151 #24	ENSOCUG00000014601	ENSOCUG00000030857	C11orf91 (ENSOCUG00000025307) #25	ENSOCUG00000033520	KIAA1549L (ENSOCUG00000029147) #26	HIPK3 (ENSOCUG00000001215) #27	CSTF3 (ENSOCUG00000015417) #28	ENSOCUG00000023635	TCP11L1 (ENSOCUG00000015409) #29	QSER1 (ENSOCUG00000015381) #32	PRRG4 (ENSOCUG00000012440) #33	ENSOCUG00000035878	CCDC73 (ENSOCUG00000004491) #34
Pika	MODERN SPECIES	203										EHF (ENSOPRG00000009878) #16	ELF5 (ENSOPRG00000009858) #17	CAT (ENSOPRG00000009833) #18	ABTB2 (ENSOPRG00000009802) #19	NAT10 (ENSOPRG00000009758) #20	CAPRIN1 (ENSOPRG00000009733) #21	ENSOPRG00000009726 #22	FBXO3 (ENSOPRG00000009696) #24	ENSOPRG00000009688	C11orf91 (ENSOPRG00000009681) #25	ENSOPRG00000009675	ENSOPRG00000009663	KIAA1549L (ENSOPRG00000009597) #26
Tree shrew	MODERN SPECIES	7553																LMO2 (ENSTBEG00000009818) #22