Amniota	ANCESTRAL SPECIES	20	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00940000157530.b	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426
Mammalia	ANCESTRAL SPECIES	9	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Theria	ANCESTRAL SPECIES	8	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Eutheria	ANCESTRAL SPECIES	3	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Primates	ANCESTRAL SPECIES		ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b	ENSGT00410000028070
Simiiformes	ANCESTRAL SPECIES		ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00410000028070	ENSGT01010000222360.D.b
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046.e #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.h #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b	ENSGT00940000155391.a
Mas night monkey	MODERN SPECIES	349	LDLRAD3 (ENSANAG00000037192) #7	ENSANAG00000030501 #8	TRIM44 (ENSANAG00000014196) #9	PAMR1 (ENSANAG00000029143) #10	SLC1A2 (ENSANAG00000020434) #11	ENSANAG00000025347 #12	CD44 (ENSANAG00000029878) #13	ENSANAG00000015605 #14	APIP (ENSANAG00000038438) #15	EHF (ENSANAG00000024254) #16	ELF5 (ENSANAG00000016910) #17	CAT (ENSANAG00000030970) #18	ABTB2 (ENSANAG00000030512) #19	NAT10 (ENSANAG00000026850) #20	CAPRIN1 (ENSANAG00000032811) #21	LMO2 (ENSANAG00000023079) #22	ENSANAG00000037514 #23	FBXO3 (ENSANAG00000026400) #24	CD59 (ENSANAG00000033427) #25	C11orf91 (ENSANAG00000035705) #26	KIAA1549L (ENSANAG00000028969) #27	ENSANAG00000037529 #28	HIPK3 (ENSANAG00000034057) #29	CSTF3 (ENSANAG00000020699) #30	TCP11L1 (ENSANAG00000029283) #31	DEPDC7 (ENSANAG00000025421) #32	QSER1 (ENSANAG00000034582) #33	PRRG4 (ENSANAG00000033287) #34	CCDC73 (ENSANAG00000021031) #35	EIF3M (ENSANAG00000031661) #36	WT1 (ENSANAG00000025090) #37
Cebidae	ANCESTRAL SPECIES		ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046.e #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.h #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b	ENSGT00940000155391.a
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046.e #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.h #21	ENSGT00940000160199 #22	ENSGT00460000041594.e.b ##23	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00940000153402.c.a.a.b.b.b	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Capuchin	MODERN SPECIES	66	PRR5L (ENSCCAG00000026981)	COMMD9 (ENSCCAG00000025370)	LDLRAD3 (ENSCCAG00000025416) #7	TRIM44 (ENSCCAG00000023918) #9	PAMR1 (ENSCCAG00000026688) #10	SLC1A2 (ENSCCAG00000023288) #11	CD44 (ENSCCAG00000027898) #13	ENSCCAG00000026050 #14	APIP (ENSCCAG00000034199) #15	EHF (ENSCCAG00000024416) #16	ELF5 (ENSCCAG00000037404) #17	CAT (ENSCCAG00000033204) #18	ABTB2 (ENSCCAG00000036795) #19	NAT10 (ENSCCAG00000003512) #20	CAPRIN1 (ENSCCAG00000020172) #21	LMO2 (ENSCCAG00000025912) #22	ENSCCAG00000031196 ##23	FBXO3 (ENSCCAG00000019477) #24	CD59 (ENSCCAG00000021398) #25	KIAA1549L (ENSCCAG00000036428) #27	RFWD3 (ENSCCAG00000023598)	MLKL (ENSCCAG00000036286)	FA2H (ENSCCAG00000035959)	WDR59 (ENSCCAG00000027555)	ZNRF1 (ENSCCAG00000021109)	ENSCCAG00000026091	LDHD (ENSCCAG00000026173)	ZFP1 (ENSCCAG00000031497)	ENSCCAG00000032067	ENSCCAG00000028698	ENSCCAG00000032181
Bolivian squirrel monkey	MODERN SPECIES	42	PRR5L (ENSSBOG00000033062)	COMMD9 (ENSSBOG00000023383)	LDLRAD3 (ENSSBOG00000024561) #7	TRIM44 (ENSSBOG00000019501) #9	PAMR1 (ENSSBOG00000034633) #10	SLC1A2 (ENSSBOG00000031126) #11	CD44 (ENSSBOG00000020740) #13	ENSSBOG00000007623 #14	APIP (ENSSBOG00000027533) #15	EHF (ENSSBOG00000007293) #16	ELF5 (ENSSBOG00000025536) #17	CAT (ENSSBOG00000035672) #18	ABTB2 (ENSSBOG00000019878) #19	NAT10 (ENSSBOG00000023643) #20	CAPRIN1 (ENSSBOG00000029900) #21	LMO2 (ENSSBOG00000019669) #22	ENSSBOG00000033446 ##23	FBXO3 (ENSSBOG00000023671) #24	CD59 (ENSSBOG00000022436) #25	C11orf91 (ENSSBOG00000020764) #26	KIAA1549L (ENSSBOG00000033426) #27	HIPK3 (ENSSBOG00000033538) #29	CSTF3 (ENSSBOG00000024764) #30	TCP11L1 (ENSSBOG00000022211) #31	DEPDC7 (ENSSBOG00000000510) #32	ENSSBOG00000022725	QSER1 (ENSSBOG00000030905) #33	PRRG4 (ENSSBOG00000021778) #34	CCDC73 (ENSSBOG00000026906) #35	EIF3M (ENSSBOG00000035716) #36	WT1 (ENSSBOG00000020662) #37
Marmoset	MODERN SPECIES	2	FJX1 (ENSCJAG00000010998)	PAMR1 (ENSCJAG00000010977) #10	SLC1A2 (ENSCJAG00000010952) #11	CD44 (ENSCJAG00000010912) #13	PDHX (ENSCJAG00000010888) #14	APIP (ENSCJAG00000065396) #15	EHF (ENSCJAG00000010810) #16	ELF5 (ENSCJAG00000040519) #17	CAT (ENSCJAG00000010742) #18	ENSCJAG00000079093	ENSCJAG00000070732	ABTB2 (ENSCJAG00000010711) #19	NAT10 (ENSCJAG00000010585) #20	CAPRIN1 (ENSCJAG00000010542) #21	ENSCJAG00000076270	LMO2 (ENSCJAG00000010531) #22	FBXO3 (ENSCJAG00000010459) #24	CD59 (ENSCJAG00000043097) #25	C11orf91 (ENSCJAG00000044908) #26	KIAA1549L (ENSCJAG00000010403) #27	HIPK3 (ENSCJAG00000010402) #29	CSTF3 (ENSCJAG00000005533) #30	TCP11L1 (ENSCJAG00000005638) #31	DEPDC7 (ENSCJAG00000005688) #32	QSER1 (ENSCJAG00000005754) #33	CCDC73 (ENSCJAG00000005803) #35	EIF3M (ENSCJAG00000005845) #36	WT1 (ENSCJAG00000005900) #37	RCN1 (ENSCJAG00000005925)	PAX6 (ENSCJAG00000005942)	ELP4 (ENSCJAG00000005994)
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b.p	ENSGT00410000028070
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000155067.a.a.a	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00390000005496.f	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Hominidae	ANCESTRAL SPECIES	1	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000155067.a.a.a	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00390000005496.f	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	20	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000155067.a.a.a	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00390000005496.f	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000155067.a.a.a	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00390000005496.f	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Pan	ANCESTRAL SPECIES	1	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000155067.a.a.a	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00390000005496.f	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Chimpanzee	MODERN SPECIES	2	TRIM44 (ENSPTRG00000003504) #9	FJX1 (ENSPTRG00000041394)	PAMR1 (ENSPTRG00000003503) #10	SLC1A2 (ENSPTRG00000003502) #11	ENSPTRG00000048633 #12	CD44 (ENSPTRG00000003501) #13	PDHX (ENSPTRG00000003500) #14	APIP (ENSPTRG00000003499) #15	EHF (ENSPTRG00000003498) #16	ELF5 (ENSPTRG00000003497) #17	CAT (ENSPTRG00000003496) #18	ABTB2 (ENSPTRG00000003495) #19	NAT10 (ENSPTRG00000003494) #20	CAPRIN1 (ENSPTRG00000003493) #21	ENSPTRG00000003492	LMO2 (ENSPTRG00000003491) #22	ENSPTRG00000047371	FBXO3 (ENSPTRG00000003490) #24	CD59 (ENSPTRG00000003489) #26	KIAA1549L (ENSPTRG00000003487) #27	HIPK3 (ENSPTRG00000003486) #29	CSTF3 (ENSPTRG00000003485) #30	ENSPTRG00000043490	TCP11L1 (ENSPTRG00000003483) #31	DEPDC7 (ENSPTRG00000003482) #32	QSER1 (ENSPTRG00000003481) #33	PRRG4 (ENSPTRG00000044460) #34	CCDC73 (ENSPTRG00000003479) #35	EIF3M (ENSPTRG00000003478) #36	WT1 (ENSPTRG00000003476) #37	ENSPTRG00000050578
Bonobo	MODERN SPECIES	2	TRIM44 (ENSPPAG00000002641) #9	ENSPPAG00000041553	PAMR1 (ENSPPAG00000025516) #10	SLC1A2 (ENSPPAG00000030524) #11	ENSPPAG00000037465 #12	CD44 (ENSPPAG00000043653) #13	PDHX (ENSPPAG00000030642) #14	ENSPPAG00000034280 #15	EHF (ENSPPAG00000035904) #16	ELF5 (ENSPPAG00000031806) #17	CAT (ENSPPAG00000039204) #18	ABTB2 (ENSPPAG00000039240) #19	NAT10 (ENSPPAG00000036069) #20	CAPRIN1 (ENSPPAG00000016974) #21	ENSPPAG00000038435	ENSPPAG00000036263 #22	ENSPPAG00000016006	FBXO3 (ENSPPAG00000032146) #24	CD59 (ENSPPAG00000036733) #25	ENSPPAG00000033085 #27	HIPK3 (ENSPPAG00000042665) #29	CSTF3 (ENSPPAG00000027358) #30	ENSPPAG00000042143	TCP11L1 (ENSPPAG00000028485) #31	DEPDC7 (ENSPPAG00000039670) #32	QSER1 (ENSPPAG00000039290) #33	PRRG4 (ENSPPAG00000008783) #34	CCDC73 (ENSPPAG00000018334) #35	EIF3M (ENSPPAG00000029515) #36	WT1 (ENSPPAG00000033782) #37	ENSPPAG00000040558
Human	MODERN SPECIES	2	COMMD9 (ENSG00000110442)	LDLRAD3 (ENSG00000179241) #7	TRIM44 (ENSG00000166326) #9	FJX1 (ENSG00000179431)	PAMR1 (ENSG00000149090) #10	SLC1A2 (ENSG00000110436) #11	CD44 (ENSG00000026508) #13	PDHX (ENSG00000110435) #14	APIP (ENSG00000149089) #15	EHF (ENSG00000135373) #16	ELF5 (ENSG00000135374) #17	CAT (ENSG00000121691) #18	ABTB2 (ENSG00000166016) #19	NAT10 (ENSG00000135372) #20	CAPRIN1 (ENSG00000135387) #21	LMO2 (ENSG00000135363) #22	FBXO3 (ENSG00000110429) #24	CD59 (ENSG00000085063) #25	ENSG00000284969	C11orf91 (ENSG00000205177) #26	KIAA1549L (ENSG00000110427) #27	HIPK3 (ENSG00000110422) #29	CSTF3 (ENSG00000176102) #30	TCP11L1 (ENSG00000176148) #31	DEPDC7 (ENSG00000121690) #32	QSER1 (ENSG00000060749) #33	PRRG4 (ENSG00000135378) #34	CCDC73 (ENSG00000186714) #35	EIF3M (ENSG00000149100) #36	WT1 (ENSG00000184937) #37	RCN1 (ENSG00000049449)
Gorilla	MODERN SPECIES	2	ENSGGOG00000037454	TRIM44 (ENSGGOG00000004970) #9	FJX1 (ENSGGOG00000026577)	PAMR1 (ENSGGOG00000014257) #10	SLC1A2 (ENSGGOG00000041651) #11	ENSGGOG00000043068 #12	CD44 (ENSGGOG00000000851) #13	PDHX (ENSGGOG00000001206) #14	APIP (ENSGGOG00000022940) #15	EHF (ENSGGOG00000006149) #16	ELF5 (ENSGGOG00000006882) #17	CAT (ENSGGOG00000010662) #18	ABTB2 (ENSGGOG00000014588) #19	NAT10 (ENSGGOG00000014560) #20	CAPRIN1 (ENSGGOG00000010997) #21	LMO2 (ENSGGOG00000024903) #22	ENSGGOG00000042559	FBXO3 (ENSGGOG00000001949) #24	ENSGGOG00000041311 #25	KIAA1549L (ENSGGOG00000004207) #27	HIPK3 (ENSGGOG00000025468) #29	CSTF3 (ENSGGOG00000026591) #30	ENSGGOG00000040397	TCP11L1 (ENSGGOG00000005771) #31	DEPDC7 (ENSGGOG00000024043) #32	QSER1 (ENSGGOG00000008849) #33	PRRG4 (ENSGGOG00000004991) #34	CCDC73 (ENSGGOG00000002801) #35	EIF3M (ENSGGOG00000002796) #36	WT1 (ENSGGOG00000011586) #37	ENSGGOG00000025051
Orangutan	MODERN SPECIES	2	LDLRAD3 (ENSPPYG00000003354) #7	TRIM44 (ENSPPYG00000003355) #9	FJX1 (ENSPPYG00000038455)	PAMR1 (ENSPPYG00000003356) #10	SLC1A2 (ENSPPYG00000003357) #11	CD44 (ENSPPYG00000032340) #13	PDHX (ENSPPYG00000003360) #14	APIP (ENSPPYG00000003361) #15	ENSPPYG00000034760	EHF (ENSPPYG00000003362) #16	ELF5 (ENSPPYG00000003363) #17	CAT (ENSPPYG00000003364) #18	ABTB2 (ENSPPYG00000003365) #19	NAT10 (ENSPPYG00000003367) #20	CAPRIN1 (ENSPPYG00000029386) #21	LMO2 (ENSPPYG00000003368) #22	FBXO3 (ENSPPYG00000003369) #24	CD59 (ENSPPYG00000003370) #25	C11orf91 (ENSPPYG00000038055) #26	KIAA1549L (ENSPPYG00000003373) #27	HIPK3 (ENSPPYG00000003374) #29	CSTF3 (ENSPPYG00000003375) #30	TCP11L1 (ENSPPYG00000003376) #31	DEPDC7 (ENSPPYG00000003377) #32	QSER1 (ENSPPYG00000003378) #33	PRRG4 (ENSPPYG00000003379) #34	CCDC73 (ENSPPYG00000003380) #35	EIF3M (ENSPPYG00000038184) #36	WT1 (ENSPPYG00000029822) #37	RCN1 (ENSPPYG00000003385)	ENSPPYG00000003384
Gibbon	MODERN SPECIES	5	TRIM44 (ENSNLEG00000017939) #9	FJX1 (ENSNLEG00000018184)	PAMR1 (ENSNLEG00000017937) #10	SLC1A2 (ENSNLEG00000032279) #11	ENSNLEG00000031295 #12	CD44 (ENSNLEG00000017932) #13	PDHX (ENSNLEG00000017930) #14	APIP (ENSNLEG00000028265) #15	EHF (ENSNLEG00000017927) #16	ELF5 (ENSNLEG00000017925) #17	CAT (ENSNLEG00000017922) #18	ENSNLEG00000027640	ENSNLEG00000017921 #19	NAT10 (ENSNLEG00000017916) #20	CAPRIN1 (ENSNLEG00000017913) #21	LMO2 (ENSNLEG00000028429) #22	ENSNLEG00000018183	FBXO3 (ENSNLEG00000017908) #24	ENSNLEG00000027673 #25	KIAA1549L (ENSNLEG00000026545) #27	HIPK3 (ENSNLEG00000017906) #29	CSTF3 (ENSNLEG00000017901) #30	ENSNLEG00000030363	TCP11L1 (ENSNLEG00000017899) #31	ENSNLEG00000017897 #32	QSER1 (ENSNLEG00000017896) #33	PRRG4 (ENSNLEG00000028029) #34	CCDC73 (ENSNLEG00000017894) #35	EIF3M (ENSNLEG00000029977) #36	ENSNLEG00000017890 #37	RCN1 (ENSNLEG00000017889)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00910000148919	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b.p
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00910000148919	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b.p
Vervet Monkey	MODERN SPECIES		ENSCSAG00000019214	LDLRAD3 (ENSCSAG00000005472) #7	TRIM44 (ENSCSAG00000005470) #9	FJX1 (ENSCSAG00000019315)	PAMR1 (ENSCSAG00000005463) #10	SLC1A2 (ENSCSAG00000005437) #11	CD44 (ENSCSAG00000005433) #13	PDHX (ENSCSAG00000005431) #14	APIP (ENSCSAG00000005426) #15	EHF (ENSCSAG00000005424) #16	ELF5 (ENSCSAG00000005423) #17	CAT (ENSCSAG00000005418) #18	ABTB2 (ENSCSAG00000005406) #19	NAT10 (ENSCSAG00000005383) #20	CAPRIN1 (ENSCSAG00000005378) #21	LMO2 (ENSCSAG00000005369) #22	FBXO3 (ENSCSAG00000005366) #24	CD59 (ENSCSAG00000005360) #25	C11orf91 (ENSCSAG00000005348) #26	KIAA1549L (ENSCSAG00000005316) #27	HIPK3 (ENSCSAG00000005298) #29	ENSCSAG00000005283	TCP11L1 (ENSCSAG00000005280) #31	DEPDC7 (ENSCSAG00000005274) #32	QSER1 (ENSCSAG00000005271) #33	PRRG4 (ENSCSAG00000005265) #34	CCDC73 (ENSCSAG00000005263) #35	EIF3M (ENSCSAG00000005261) #36	WT1 (ENSCSAG00000005257) #37	RCN1 (ENSCSAG00000005255)	PAX6 (ENSCSAG00000005253)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00910000148919	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b.p
Macaca	ANCESTRAL SPECIES	2	ENSGT00910000147182	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00910000148919	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b.p
Pig-tailed macaque	MODERN SPECIES	485	TRIM44 (ENSMNEG00000039165) #9	FJX1 (ENSMNEG00000021210)	PAMR1 (ENSMNEG00000038968) #10	SLC1A2 (ENSMNEG00000033227) #11	ENSMNEG00000027059 #12	CD44 (ENSMNEG00000024975) #13	PDHX (ENSMNEG00000041540) #14	APIP (ENSMNEG00000037577) #15	EHF (ENSMNEG00000035998) #16	ELF5 (ENSMNEG00000036605) #17	CAT (ENSMNEG00000043629) #18	ENSMNEG00000043168	ABTB2 (ENSMNEG00000011772) #19	NAT10 (ENSMNEG00000041284) #20	CAPRIN1 (ENSMNEG00000030485) #21	LMO2 (ENSMNEG00000031732) #22	FBXO3 (ENSMNEG00000045464) #24	C11orf91 (ENSMNEG00000033587) #26	KIAA1549L (ENSMNEG00000040724) #27	HIPK3 (ENSMNEG00000030400) #29	CSTF3 (ENSMNEG00000021807) #30	TCP11L1 (ENSMNEG00000034850) #31	DEPDC7 (ENSMNEG00000010538) #32	QSER1 (ENSMNEG00000038918) #33	PRRG4 (ENSMNEG00000035106) #34	CCDC73 (ENSMNEG00000037225) #35	EIF3M (ENSMNEG00000002856) #36	WT1 (ENSMNEG00000010071) #37	ENSMNEG00000036921	RCN1 (ENSMNEG00000032501)	PAX6 (ENSMNEG00000035602)
Macaca_a	ANCESTRAL SPECIES	3	ENSGT01030000240096	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000165497.F.b.b.a.b.a	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00910000148919	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT01100000263539.b.b.b.a.b.b.a.b	ENSGT00940000156734 #37	ENSGT01030000240314
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000065530	TRIM44 (ENSMFAG00000045833) #9	PAMR1 (ENSMFAG00000042856) #10	SLC1A2 (ENSMFAG00000043293) #11	CD44 (ENSMFAG00000043892) #13	PDHX (ENSMFAG00000042807) #14	APIP (ENSMFAG00000031416) #15	EHF (ENSMFAG00000029447) #16	ELF5 (ENSMFAG00000046400) #17	ENSMFAG00000065345	CAT (ENSMFAG00000000437) #18	ENSMFAG00000001208 #19	NAT10 (ENSMFAG00000041013) #20	CAPRIN1 (ENSMFAG00000038273) #21	ENSMFAG00000065168	LMO2 (ENSMFAG00000038993) #22	FBXO3 (ENSMFAG00000044515) #24	C11orf91 (ENSMFAG00000032872) #26	ENSMFAG00000061345	KIAA1549L (ENSMFAG00000037738) #27	HIPK3 (ENSMFAG00000045654) #29	CSTF3 (ENSMFAG00000029516) #30	ENSMFAG00000053275	TCP11L1 (ENSMFAG00000036174) #31	DEPDC7 (ENSMFAG00000030758) #32	ENSMFAG00000054564	QSER1 (ENSMFAG00000042029) #33	ENSMFAG00000050331	PRRG4 (ENSMFAG00000001744) #34	CCDC73 (ENSMFAG00000043757) #35	EIF3M (ENSMFAG00000040767) #36
Rhesus	MODERN SPECIES	5	TRIM44 (ENSMMUG00000004332) #9	FJX1 (ENSMMUG00000004331)	PAMR1 (ENSMMUG00000004330) #10	SLC1A2 (ENSMMUG00000004329) #11	CD44 (ENSMMUG00000004327) #13	PDHX (ENSMMUG00000006448) #14	APIP (ENSMMUG00000006447) #15	ENSMMUG00000057784	EHF (ENSMMUG00000005927) #16	ELF5 (ENSMMUG00000002432) #17	CAT (ENSMMUG00000002429) #18	ABTB2 (ENSMMUG00000058619) #19	NAT10 (ENSMMUG00000021646) #20	CAPRIN1 (ENSMMUG00000021643) #21	ENSMMUG00000041821	LMO2 (ENSMMUG00000007633) #22	FBXO3 (ENSMMUG00000006063) #24	CD59 (ENSMMUG00000055602) #25	KIAA1549L (ENSMMUG00000017218) #27	HIPK3 (ENSMMUG00000019988) #29	CSTF3 (ENSMMUG00000002542) #30	TCP11L1 (ENSMMUG00000002539) #31	DEPDC7 (ENSMMUG00000002535) #32	QSER1 (ENSMMUG00000001536) #33	ENSMMUG00000055352	PRRG4 (ENSMMUG00000049850) #34	CCDC73 (ENSMMUG00000009028) #35	EIF3M (ENSMMUG00000009026) #36	ENSMMUG00000060261	WT1 (ENSMMUG00000009881) #37	ENSMMUG00000041430
Cercopithecinae_b	ANCESTRAL SPECIES	27	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b.p	ENSGT00410000028070
Olive baboon	MODERN SPECIES	3	ENSPANG00000040429	TRIM44 (ENSPANG00000005449) #9	FJX1 (ENSPANG00000006035)	PAMR1 (ENSPANG00000001890) #10	SLC1A2 (ENSPANG00000004847) #11	CD44 (ENSPANG00000023332) #13	ENSPANG00000042989	PDHX (ENSPANG00000008468) #14	APIP (ENSPANG00000020888) #15	EHF (ENSPANG00000024423) #16	ELF5 (ENSPANG00000023357) #17	CAT (ENSPANG00000007496) #18	ABTB2 (ENSPANG00000015046) #19	NAT10 (ENSPANG00000013723) #20	CAPRIN1 (ENSPANG00000006439) #21	LMO2 (ENSPANG00000017076) #22	FBXO3 (ENSPANG00000007978) #24	CD59 (ENSPANG00000003386) #25	C11orf91 (ENSPANG00000038718) #26	KIAA1549L (ENSPANG00000011193) #27	HIPK3 (ENSPANG00000008706) #29	ENSPANG00000040901	CSTF3 (ENSPANG00000013722) #30	TCP11L1 (ENSPANG00000005094) #31	DEPDC7 (ENSPANG00000007554) #32	QSER1 (ENSPANG00000011445) #33	PRRG4 (ENSPANG00000014281) #34	ENSPANG00000023649	EIF3M (ENSPANG00000006540) #36	WT1 (ENSPANG00000019482) #37	ENSPANG00000043688
Cercopithecinae_d	ANCESTRAL SPECIES	61	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00910000147087 #12	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b.p	ENSGT00410000028070
Sooty mangabey	MODERN SPECIES	660	ENSCATG00000029956	TRIM44 (ENSCATG00000041732) #9	FJX1 (ENSCATG00000019714)	PAMR1 (ENSCATG00000037871) #10	SLC1A2 (ENSCATG00000042113) #11	ENSCATG00000032365 #12	CD44 (ENSCATG00000038723) #13	PDHX (ENSCATG00000031099) #14	APIP (ENSCATG00000032616) #15	EHF (ENSCATG00000035479) #16	ELF5 (ENSCATG00000039615) #17	CAT (ENSCATG00000034200) #18	ABTB2 (ENSCATG00000039861) #19	NAT10 (ENSCATG00000037820) #20	CAPRIN1 (ENSCATG00000038427) #21	LMO2 (ENSCATG00000035418) #22	FBXO3 (ENSCATG00000043919) #24	C11orf91 (ENSCATG00000038135) #26	KIAA1549L (ENSCATG00000036464) #27	HIPK3 (ENSCATG00000037808) #29	CSTF3 (ENSCATG00000007080) #30	TCP11L1 (ENSCATG00000038705) #31	DEPDC7 (ENSCATG00000014838) #32	QSER1 (ENSCATG00000002800) #33	PRRG4 (ENSCATG00000033395) #34	CCDC73 (ENSCATG00000033902) #35	EIF3M (ENSCATG00000014736) #36	WT1 (ENSCATG00000034786) #37	ENSCATG00000032474	RCN1 (ENSCATG00000008559)	PAX6 (ENSCATG00000036582)
Drill	MODERN SPECIES	1463	TRIM44 (ENSMLEG00000032388) #9	ENSMLEG00000032999	PAMR1 (ENSMLEG00000011115) #10	SLC1A2 (ENSMLEG00000043724) #11	ENSMLEG00000006190 #12	CD44 (ENSMLEG00000036902) #13	PDHX (ENSMLEG00000032133) #14	APIP (ENSMLEG00000038938) #15	EHF (ENSMLEG00000031177) #16	ELF5 (ENSMLEG00000011534) #17	CAT (ENSMLEG00000036619) #18	ABTB2 (ENSMLEG00000034734) #19	NAT10 (ENSMLEG00000017199) #20	CAPRIN1 (ENSMLEG00000043851) #21	ENSMLEG00000037419	LMO2 (ENSMLEG00000029197) #22	FBXO3 (ENSMLEG00000041134) #24	CD59 (ENSMLEG00000037740) #25	KIAA1549L (ENSMLEG00000027768) #27	HIPK3 (ENSMLEG00000031846) #29	ENSMLEG00000038576	CSTF3 (ENSMLEG00000039594) #30	TCP11L1 (ENSMLEG00000042483) #31	DEPDC7 (ENSMLEG00000042787) #32	QSER1 (ENSMLEG00000027791) #33	PRRG4 (ENSMLEG00000039168) #34	CCDC73 (ENSMLEG00000039999) #35	EIF3M (ENSMLEG00000000401) #36	WT1 (ENSMLEG00000040206) #37	RCN1 (ENSMLEG00000041748)	PAX6 (ENSMLEG00000030045)
Rhinopithecus	ANCESTRAL SPECIES	111	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00910000148919	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00410000028070	ENSGT01010000222360.D.b.o.b
Black snub-nosed monkey	MODERN SPECIES	1475			TRIM44 (ENSRBIG00000030012) #9	PAMR1 (ENSRBIG00000038564) #10	SLC1A2 (ENSRBIG00000031455) #11	CD44 (ENSRBIG00000035084) #13	PDHX (ENSRBIG00000040537) #14	APIP (ENSRBIG00000027526) #15	EHF (ENSRBIG00000026520) #16	ELF5 (ENSRBIG00000031645) #17	CAT (ENSRBIG00000000541) #18	ABTB2 (ENSRBIG00000038271) #19	NAT10 (ENSRBIG00000028922) #20	CAPRIN1 (ENSRBIG00000028278) #21	ENSRBIG00000022126	LMO2 (ENSRBIG00000028113) #22	FBXO3 (ENSRBIG00000024490) #24	CD59 (ENSRBIG00000013725) #25	KIAA1549L (ENSRBIG00000040921) #27	HIPK3 (ENSRBIG00000028852) #29	CSTF3 (ENSRBIG00000044258) #30	TCP11L1 (ENSRBIG00000034795) #31	DEPDC7 (ENSRBIG00000044933) #32	ENSRBIG00000044919	QSER1 (ENSRBIG00000035996) #33	PRRG4 (ENSRBIG00000025851) #34	CCDC73 (ENSRBIG00000043667) #35	EIF3M (ENSRBIG00000035900) #36	WT1 (ENSRBIG00000039095) #37
Golden snub-nosed monkey	MODERN SPECIES	3270	COMMD9 (ENSRROG00000036538)	LDLRAD3 (ENSRROG00000032454) #7	ENSRROG00000035939	TRIM44 (ENSRROG00000039062) #9	PAMR1 (ENSRROG00000028590) #10	SLC1A2 (ENSRROG00000030103) #11	CD44 (ENSRROG00000040965) #13	PDHX (ENSRROG00000045075) #14	APIP (ENSRROG00000044872) #15	EHF (ENSRROG00000038817) #16	ELF5 (ENSRROG00000031978) #17	CAT (ENSRROG00000002648) #18	ABTB2 (ENSRROG00000035702) #19	NAT10 (ENSRROG00000011811) #20	CAPRIN1 (ENSRROG00000039325) #21	LMO2 (ENSRROG00000042167) #22	FBXO3 (ENSRROG00000040121) #24	CD59 (ENSRROG00000024041) #25	KIAA1549L (ENSRROG00000039380) #27	HIPK3 (ENSRROG00000043050) #29	CSTF3 (ENSRROG00000043450) #30	TCP11L1 (ENSRROG00000036609) #31	DEPDC7 (ENSRROG00000037551) #32	ENSRROG00000033898	QSER1 (ENSRROG00000041839) #33	PRRG4 (ENSRROG00000027600) #34	CCDC73 (ENSRROG00000029039) #35	EIF3M (ENSRROG00000041725) #36	WT1 (ENSRROG00000021147) #37	ENSRROG00000031511	ENSRROG00000001783
Tarsier	MODERN SPECIES	1287															CAPRIN1 (ENSTSYG00000033857) #21	LMO2 (ENSTSYG00000004073) #22	FBXO3 (ENSTSYG00000010407) #24	ENSTSYG00000028137 #25
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.c #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Lemuriformes	ANCESTRAL SPECIES	16	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.c #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Lemuriformes_a	ANCESTRAL SPECIES	92	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.c #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Greater bamboo lemur	MODERN SPECIES	280													ABTB2 (ENSPSMG00000016407) #19	NAT10 (ENSPSMG00000016370) #20	CAPRIN1 (ENSPSMG00000016320) #21	LMO2 (ENSPSMG00000016253) #22	FBXO3 (ENSPSMG00000016164) #24	C11orf91 (ENSPSMG00000015950) #26	KIAA1549L (ENSPSMG00000015945) #27	HIPK3 (ENSPSMG00000015860) #29	CSTF3 (ENSPSMG00000015685) #30	TCP11L1 (ENSPSMG00000015633) #31	DEPDC7 (ENSPSMG00000015597) #32	ENSPSMG00000015560 #33	PRRG4 (ENSPSMG00000015554) #34	CCDC73 (ENSPSMG00000015536) #35	EIF3M (ENSPSMG00000015489) #36	WT1 (ENSPSMG00000015310) #37	ENSPSMG00000015171	RCN1 (ENSPSMG00000015166)	PAX6 (ENSPSMG00000014706)
Coquerels sifaka	MODERN SPECIES	425	COMMD9 (ENSPCOG00000027062)	LDLRAD3 (ENSPCOG00000018799) #7	TRIM44 (ENSPCOG00000017249) #9	FJX1 (ENSPCOG00000012141)	PAMR1 (ENSPCOG00000021819) #10	SLC1A2 (ENSPCOG00000024058) #11	CD44 (ENSPCOG00000025918) #13	PDHX (ENSPCOG00000018230) #14	APIP (ENSPCOG00000000871) #15	EHF (ENSPCOG00000015717) #16	ELF5 (ENSPCOG00000021457) #17	CAT (ENSPCOG00000017699) #18	ABTB2 (ENSPCOG00000028529) #19	NAT10 (ENSPCOG00000009633) #20	CAPRIN1 (ENSPCOG00000021422) #21	LMO2 (ENSPCOG00000002410) #22	ENSPCOG00000018436 #24	CD59 (ENSPCOG00000012858) #25	C11orf91 (ENSPCOG00000023742) #26	KIAA1549L (ENSPCOG00000022400) #27	ENSPCOG00000018218	HIPK3 (ENSPCOG00000017859) #29	CSTF3 (ENSPCOG00000014417) #30	TCP11L1 (ENSPCOG00000027055) #31	DEPDC7 (ENSPCOG00000000072) #32	QSER1 (ENSPCOG00000015677) #33	ENSPCOG00000012591	PRRG4 (ENSPCOG00000017212) #34	CCDC73 (ENSPCOG00000019230) #35	EIF3M (ENSPCOG00000005374) #36	WT1 (ENSPCOG00000020436) #37
Mouse lemur	MODERN SPECIES	27	TRIM44 (ENSMICG00000008587) #9	FJX1 (ENSMICG00000033879)	PAMR1 (ENSMICG00000003733) #10	SLC1A2 (ENSMICG00000003719) #11	CD44 (ENSMICG00000003713) #13	ENSMICG00000036406	PDHX (ENSMICG00000003700) #14	APIP (ENSMICG00000003696) #15	EHF (ENSMICG00000003694) #16	ENSMICG00000038699	ELF5 (ENSMICG00000003689) #17	CAT (ENSMICG00000003672) #18	ABTB2 (ENSMICG00000003665) #19	NAT10 (ENSMICG00000003627) #20	CAPRIN1 (ENSMICG00000003617) #21	LMO2 (ENSMICG00000027826) #22	FBXO3 (ENSMICG00000012713) #24	CD59 (ENSMICG00000037109) #25	C11orf91 (ENSMICG00000042497) #26	KIAA1549L (ENSMICG00000012651) #27	HIPK3 (ENSMICG00000038979) #29	CSTF3 (ENSMICG00000004784) #30	TCP11L1 (ENSMICG00000004776) #31	DEPDC7 (ENSMICG00000004770) #32	QSER1 (ENSMICG00000035367) #33	PRRG4 (ENSMICG00000046080) #34	CCDC73 (ENSMICG00000027398) #35	EIF3M (ENSMICG00000035817) #36	WT1 (ENSMICG00000004097) #37	RCN1 (ENSMICG00000027735)	PAX6 (ENSMICG00000004089)
Bushbaby	MODERN SPECIES	116	LDLRAD3 (ENSOGAG00000016253) #7	ENSOGAG00000030890	TRIM44 (ENSOGAG00000016248) #9	FJX1 (ENSOGAG00000027707)	PAMR1 (ENSOGAG00000016246) #10	SLC1A2 (ENSOGAG00000016241) #11	CD44 (ENSOGAG00000016233) #13	PDHX (ENSOGAG00000015641) #14	APIP (ENSOGAG00000015637) #15	EHF (ENSOGAG00000015942) #16	ELF5 (ENSOGAG00000006242) #17	CAT (ENSOGAG00000006240) #18	ABTB2 (ENSOGAG00000000457) #19	NAT10 (ENSOGAG00000016737) #20	CAPRIN1 (ENSOGAG00000016733) #21	LMO2 (ENSOGAG00000014321) #22	FBXO3 (ENSOGAG00000014318) #24	CD59 (ENSOGAG00000003325) #25	C11orf91 (ENSOGAG00000033539) #26	KIAA1549L (ENSOGAG00000003316) #27	HIPK3 (ENSOGAG00000008857) #29	CSTF3 (ENSOGAG00000010229) #30	TCP11L1 (ENSOGAG00000003835) #31	DEPDC7 (ENSOGAG00000009992) #32	QSER1 (ENSOGAG00000034265) #33	CCDC73 (ENSOGAG00000033579) #35	EIF3M (ENSOGAG00000015913) #36	WT1 (ENSOGAG00000007118) #37	RCN1 (ENSOGAG00000007861)	PAX6 (ENSOGAG00000007857)	ELP4 (ENSOGAG00000007855)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Tree shrew	MODERN SPECIES	7553																LMO2 (ENSTBEG00000009818) #22
Glires	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Lagomorpha	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT01030000240070	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Rabbit	MODERN SPECIES		COMMD9 (ENSOCUG00000015674)	LDLRAD3 (ENSOCUG00000026068) #7	TRIM44 (ENSOCUG00000003818) #9	FJX1 (ENSOCUG00000026770)	PAMR1 (ENSOCUG00000000721) #10	SLC1A2 (ENSOCUG00000000718) #11	CD44 (ENSOCUG00000000715) #13	PDHX (ENSOCUG00000008004) #14	APIP (ENSOCUG00000021141) #15	EHF (ENSOCUG00000010261) #16	ELF5 (ENSOCUG00000014207) #17	CAT (ENSOCUG00000014198) #18	ABTB2 (ENSOCUG00000001405) #19	NAT10 (ENSOCUG00000001398) #20	CAPRIN1 (ENSOCUG00000024887) #21	LMO2 (ENSOCUG00000001532) #22	ENSOCUG00000014606 #24	ENSOCUG00000038151 #24	ENSOCUG00000014601 #25	ENSOCUG00000030857	C11orf91 (ENSOCUG00000025307) #26	ENSOCUG00000033520	KIAA1549L (ENSOCUG00000029147) #27	HIPK3 (ENSOCUG00000001215) #29	CSTF3 (ENSOCUG00000015417) #30	ENSOCUG00000023635	TCP11L1 (ENSOCUG00000015409) #31	QSER1 (ENSOCUG00000015381) #33	PRRG4 (ENSOCUG00000012440) #34	ENSOCUG00000035878	CCDC73 (ENSOCUG00000004491) #35
Pika	MODERN SPECIES	203										EHF (ENSOPRG00000009878) #16	ELF5 (ENSOPRG00000009858) #17	CAT (ENSOPRG00000009833) #18	ABTB2 (ENSOPRG00000009802) #19	NAT10 (ENSOPRG00000009758) #20	CAPRIN1 (ENSOPRG00000009733) #21	ENSOPRG00000009726 #22	FBXO3 (ENSOPRG00000009696) #24	ENSOPRG00000009688 #25	C11orf91 (ENSOPRG00000009681) #26	ENSOPRG00000009675	ENSOPRG00000009663	KIAA1549L (ENSOPRG00000009597) #27
Rodentia	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.b #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164077.c.a.b	ENSGT00940000164129.b.b	ENSGT00940000164776	ENSGT00950000182857.a.a.a	ENSGT00940000155733.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.b #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164776	ENSGT00950000182857.a.a.a	ENSGT00940000155733.a.a	ENSGT00940000160892	ENSGT01030000234588.b.b.b.b.a
Guinea pig	MODERN SPECIES	92	COMMD9 (ENSCPOG00000010648)	LDLRAD3 (ENSCPOG00000035009) #7	TRIM44 (ENSCPOG00000011263) #9	FJX1 (ENSCPOG00000022249)	PAMR1 (ENSCPOG00000007812) #10	SLC1A2 (ENSCPOG00000007801) #11	CD44 (ENSCPOG00000007792) #13	PDHX (ENSCPOG00000003099) #14	APIP (ENSCPOG00000003097) #15	EHF (ENSCPOG00000012596) #16	ELF5 (ENSCPOG00000012593) #17	CAT (ENSCPOG00000012582) #18	ABTB2 (ENSCPOG00000020779) #19	NAT10 (ENSCPOG00000015736) #20	CAPRIN1 (ENSCPOG00000015734) #21	LMO2 (ENSCPOG00000026645) #22	FBXO3 (ENSCPOG00000013568) #24	C11orf91 (ENSCPOG00000023939) #26	KIAA1549L (ENSCPOG00000005350) #27	HIPK3 (ENSCPOG00000002078) #29	CSTF3 (ENSCPOG00000005545) #30	TCP11L1 (ENSCPOG00000019920) #31	DEPDC7 (ENSCPOG00000014540) #32	QSER1 (ENSCPOG00000012681) #33	PRRG4 (ENSCPOG00000036780) #34	ENSCPOG00000002237	ENSCPOG00000039157	ENSCPOG00000033210	ENSCPOG00000037447	ENSCPOG00000031373	ENSCPOG00000033019
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a.b #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164776	ENSGT00940000164129.b.b	ENSGT00950000182857.a.a.a	ENSGT00940000155733.a.a	ENSGT00940000160892
Degu	MODERN SPECIES	59	ENSODEG00000016254	PAMR1 (ENSODEG00000016795) #10	SLC1A2 (ENSODEG00000016926) #11	ENSODEG00000016446 #13	PDHX (ENSODEG00000016591) #14	ENSODEG00000016598	ENSODEG00000016570 #15	EHF (ENSODEG00000017375) #16	ELF5 (ENSODEG00000016572) #17	CAT (ENSODEG00000016770) #18	ENSODEG00000016618	ABTB2 (ENSODEG00000016924) #19	NAT10 (ENSODEG00000017069) #20	CAPRIN1 (ENSODEG00000016723) #21	ENSODEG00000020372	LMO2 (ENSODEG00000016866) #22	FBXO3 (ENSODEG00000016802) #24	ENSODEG00000016777	C11orf91 (ENSODEG00000016808) #26	KIAA1549L (ENSODEG00000017186) #27	ENSODEG00000017088	HIPK3 (ENSODEG00000017164) #29	ENSODEG00000016631	ENSODEG00000016737 #30	TCP11L1 (ENSODEG00000017087) #31	DEPDC7 (ENSODEG00000016692) #32	QSER1 (ENSODEG00000016682) #33	ENSODEG00000020396	PRRG4 (ENSODEG00000016931) #34	ENSODEG00000016794	ENSODEG00000017179
Long-tailed chinchilla	MODERN SPECIES	129	COMMD9 (ENSCLAG00000014761)	LDLRAD3 (ENSCLAG00000013692) #7	TRIM44 (ENSCLAG00000014212) #9	FJX1 (ENSCLAG00000014978)	PAMR1 (ENSCLAG00000014744) #10	SLC1A2 (ENSCLAG00000014237) #11	ENSCLAG00000015376 #13	PDHX (ENSCLAG00000014466) #14	APIP (ENSCLAG00000014703) #15	EHF (ENSCLAG00000017235) #16	ELF5 (ENSCLAG00000013934) #17	CAT (ENSCLAG00000013690) #18	ABTB2 (ENSCLAG00000014834) #19	NAT10 (ENSCLAG00000016692) #20	ENSCLAG00000015468 #21	LMO2 (ENSCLAG00000015594) #22	FBXO3 (ENSCLAG00000015193) #24	ENSCLAG00000014692 #25	C11orf91 (ENSCLAG00000015126) #26	KIAA1549L (ENSCLAG00000014544) #27	HIPK3 (ENSCLAG00000015597) #29	CSTF3 (ENSCLAG00000016179) #30	TCP11L1 (ENSCLAG00000014173) #31	DEPDC7 (ENSCLAG00000014529) #32	QSER1 (ENSCLAG00000015487) #33	PRRG4 (ENSCLAG00000015908) #34	ENSCLAG00000014901	ENSCLAG00000015090	ENSCLAG00000015802	ENSCLAG00000014871	ENSCLAG00000016589
Naked mole-rat female	MODERN SPECIES	14	SLC1A2 (ENSHGLG00000010072) #11	CD44 (ENSHGLG00000011767) #13	ENSHGLG00000047526	ENSHGLG00000040571	ENSHGLG00000010978 #14	APIP (ENSHGLG00000011839) #15	EHF (ENSHGLG00000009758) #16	ELF5 (ENSHGLG00000011019) #17	CAT (ENSHGLG00000011741) #18	ENSHGLG00000016446 #19	NAT10 (ENSHGLG00000016891) #20	ENSHGLG00000018658 #21	ENSHGLG00000009842	ENSHGLG00000006506	ENSHGLG00000035097	ENSHGLG00000048933 #22	ENSHGLG00000013910 #27	ENSHGLG00000044243	HIPK3 (ENSHGLG00000018314) #29	ENSHGLG00000040843	CSTF3 (ENSHGLG00000017834) #30	TCP11L1 (ENSHGLG00000018599) #31	ENSHGLG00000018618 #32	ENSHGLG00000044852	ENSHGLG00000046320	QSER1 (ENSHGLG00000015709) #33	ENSHGLG00000043439 #34	ENSHGLG00000041603	ENSHGLG00000014399	ENSHGLG00000036247	ENSHGLG00000035268
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605.f.a #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Marmotini	ANCESTRAL SPECIES	22	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605.f.a #9	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140.g #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605.f.a #9	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140.g #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Arctic ground squirrel	MODERN SPECIES	10	PRR5L (ENSUPAG00010001016)	COMMD9 (ENSUPAG00010001008)	LDLRAD3 (ENSUPAG00010000987) #7	ENSUPAG00010000969 #9	PAMR1 (ENSUPAG00010000955) #10	SLC1A2 (ENSUPAG00010000901) #11	CD44 (ENSUPAG00010000106) #13	PDHX (ENSUPAG00010000084) #14	APIP (ENSUPAG00010000057) #15	EHF (ENSUPAG00010019516) #16	ELF5 (ENSUPAG00010019491) #17	CAT (ENSUPAG00010019472) #18	ABTB2 (ENSUPAG00010019465) #19	NAT10 (ENSUPAG00010019438) #20	CAPRIN1 (ENSUPAG00010019403) #21	LMO2 (ENSUPAG00010019388) #22	FBXO3 (ENSUPAG00010019358) #24	ENSUPAG00010019350 #25	C11orf91 (ENSUPAG00010019347) #26	KIAA1549L (ENSUPAG00010019291) #27	HIPK3 (ENSUPAG00010019217) #29	CSTF3 (ENSUPAG00010019186) #30	DEPDC7 (ENSUPAG00010019164) #32	QSER1 (ENSUPAG00010019111) #33	PRRG4 (ENSUPAG00010019105) #34	ENSUPAG00010019098	CCDC73 (ENSUPAG00010019088) #35	EIF3M (ENSUPAG00010019056) #36	WT1 (ENSUPAG00010018940) #37	ENSUPAG00010018932	RCN1 (ENSUPAG00010018924)
Squirrel	MODERN SPECIES	133	PRR5L (ENSSTOG00000022180)	COMMD9 (ENSSTOG00000007267)	LDLRAD3 (ENSSTOG00000007228) #7	TRIM44 (ENSSTOG00000023760) #9	PAMR1 (ENSSTOG00000000826) #10	SLC1A2 (ENSSTOG00000000822) #11	ENSSTOG00000000813 #13	PDHX (ENSSTOG00000004403) #14	APIP (ENSSTOG00000004390) #15	ENSSTOG00000008622 #16	ELF5 (ENSSTOG00000008610) #17	CAT (ENSSTOG00000008595) #18	ABTB2 (ENSSTOG00000001839) #19	ENSSTOG00000001817 #20	CAPRIN1 (ENSSTOG00000006945) #21	LMO2 (ENSSTOG00000024319) #22	FBXO3 (ENSSTOG00000016405) #24	ENSSTOG00000011395 #25	C11orf91 (ENSSTOG00000026942) #26	KIAA1549L (ENSSTOG00000011381) #27	HIPK3 (ENSSTOG00000009714) #29	CSTF3 (ENSSTOG00000013306) #30	TCP11L1 (ENSSTOG00000013296) #31	DEPDC7 (ENSSTOG00000013289) #32	QSER1 (ENSSTOG00000027161) #33	PRRG4 (ENSSTOG00000002830) #34	ENSSTOG00000024817 #35	EIF3M (ENSSTOG00000010502) #36	WT1 (ENSSTOG00000023716) #37	ENSSTOG00000034266	ENSSTOG00000008930
Alpin marmot	MODERN SPECIES	3	PRR5L (ENSMMMG00000011238)	COMMD9 (ENSMMMG00000011235)	LDLRAD3 (ENSMMMG00000011216) #7	TRIM44 (ENSMMMG00000011195) #9	PAMR1 (ENSMMMG00000011162) #10	SLC1A2 (ENSMMMG00000011014) #11	CD44 (ENSMMMG00000010323) #13	PDHX (ENSMMMG00000010279) #14	APIP (ENSMMMG00000010262) #15	EHF (ENSMMMG00000010179) #16	ELF5 (ENSMMMG00000010124) #17	CAT (ENSMMMG00000010087) #18	ABTB2 (ENSMMMG00000010060) #19	NAT10 (ENSMMMG00000009992) #20	CAPRIN1 (ENSMMMG00000008164) #21	LMO2 (ENSMMMG00000008095) #22	FBXO3 (ENSMMMG00000008035) #24	ENSMMMG00000008026 #25	C11orf91 (ENSMMMG00000008017) #26	KIAA1549L (ENSMMMG00000007942) #27	HIPK3 (ENSMMMG00000007810) #29	ENSMMMG00000007795	CSTF3 (ENSMMMG00000007765) #30	TCP11L1 (ENSMMMG00000007740) #31	QSER1 (ENSMMMG00000007677) #33	PRRG4 (ENSMMMG00000007662) #34	ENSMMMG00000007642	CCDC73 (ENSMMMG00000007616) #35	EIF3M (ENSMMMG00000007588) #36	WT1 (ENSMMMG00000007507) #37	ENSMMMG00000007498
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005019782 #9	ENSSVLG00005019851	FJX1 (ENSSVLG00005019889)	PAMR1 (ENSSVLG00005019988) #10	SLC1A2 (ENSSVLG00005020571) #11	CD44 (ENSSVLG00005021288) #13	PDHX (ENSSVLG00005021554) #14	APIP (ENSSVLG00005021719) #15	ENSSVLG00005021768 #16	ELF5 (ENSSVLG00005021853) #17	CAT (ENSSVLG00005022137) #18	ENSSVLG00005022214	ABTB2 (ENSSVLG00005004819) #19	NAT10 (ENSSVLG00005004900) #20	CAPRIN1 (ENSSVLG00005004951) #21	LMO2 (ENSSVLG00005005066) #22	FBXO3 (ENSSVLG00005005111) #24	ENSSVLG00005005193 #25	C11orf91 (ENSSVLG00005005211) #26	KIAA1549L (ENSSVLG00005005254) #27	HIPK3 (ENSSVLG00005005422) #29	ENSSVLG00005005475	CSTF3 (ENSSVLG00005005518) #30	TCP11L1 (ENSSVLG00005005675) #31	DEPDC7 (ENSSVLG00005005722) #32	QSER1 (ENSSVLG00005005823) #33	PRRG4 (ENSSVLG00005005895) #34	CCDC73 (ENSSVLG00005005944) #35	EIF3M (ENSSVLG00005006089) #36	WT1 (ENSSVLG00005006232) #37	ENSSVLG00005006549
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Muroidea	ANCESTRAL SPECIES	2	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000160574 #7	ENSGT00550000074784.a.b	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Chinese hamster chok1gshd	MODERN SPECIES	188	Ldlrad3 (ENSCGRG00001024912) #7	ENSCGRG00001024835	Trim44 (ENSCGRG00001024631) #9	Fjx1 (ENSCGRG00001010732)	Pamr1 (ENSCGRG00001023148) #10	Slc1a2 (ENSCGRG00001023537) #11	Cd44 (ENSCGRG00001022042) #13	Pdhx (ENSCGRG00001020048) #14	APIP (ENSCGRG00001019435) #15	Ehf (ENSCGRG00001018872) #16	Elf5 (ENSCGRG00001017703) #17	Cat (ENSCGRG00001022758) #18	Abtb2 (ENSCGRG00001022262) #19	NAT10 (ENSCGRG00001010534) #20	Caprin1 (ENSCGRG00001006383) #21	Lmo2 (ENSCGRG00001003942) #22	ENSCGRG00001002101	Fbxo3 (ENSCGRG00001019997) #24	ENSCGRG00001019416 #25	A930018P22Rik (ENSCGRG00001018837) #26	D430041D05Rik (ENSCGRG00001017776) #27	Hipk3 (ENSCGRG00001016245) #29	Cstf3 (ENSCGRG00001014773) #30	Tcp11l1 (ENSCGRG00001000909) #31	Depdc7 (ENSCGRG00001023950) #32	Qser1 (ENSCGRG00001023779) #33	Prrg4 (ENSCGRG00001023311) #34	ENSCGRG00001023007	EIF3M (ENSCGRG00001022289) #36	Wt1 (ENSCGRG00001005125) #37	Them7 (ENSCGRG00001001622)
Golden Hamster	MODERN SPECIES	618	ENSMAUG00000010071	Trim44 (ENSMAUG00000008730) #9	Fjx1 (ENSMAUG00000002426)	Pamr1 (ENSMAUG00000007447) #10	Slc1a2 (ENSMAUG00000008324) #11	Cd44 (ENSMAUG00000004546) #13	Pdhx (ENSMAUG00000002883) #14	Apip (ENSMAUG00000001671) #15	Ehf (ENSMAUG00000004776) #16	Elf5 (ENSMAUG00000003650) #17	Cat (ENSMAUG00000012493) #18	Abtb2 (ENSMAUG00000011208) #19	ENSMAUG00000010653 #20	ENSMAUG00000010029 #20	Caprin1 (ENSMAUG00000008906) #21	Lmo2 (ENSMAUG00000006848) #22	ENSMAUG00000005850 #24	ENSMAUG00000003722	A930018P22Rik (ENSMAUG00000002950) #26	D430041D05Rik (ENSMAUG00000010328) #27	Hipk3 (ENSMAUG00000006713) #29	Cstf3 (ENSMAUG00000002487) #30	Tcp11l1 (ENSMAUG00000021339) #31	Depdc7 (ENSMAUG00000004610) #32	Qser1 (ENSMAUG00000003616) #33	Prrg4 (ENSMAUG00000002732) #34	ENSMAUG00000009063 #35	Eif3m (ENSMAUG00000007848) #36	Wt1 (ENSMAUG00000008036) #37	Them7 (ENSMAUG00000004067)	Rcn1 (ENSMAUG00000003393)
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Prairie vole	MODERN SPECIES	81	Ldlrad3 (ENSMOCG00000000619) #7	Trim44 (ENSMOCG00000006259) #9	Fjx1 (ENSMOCG00000004525)	Pamr1 (ENSMOCG00000003031) #10	Slc1a2 (ENSMOCG00000022434) #11	Cd44 (ENSMOCG00000021544) #13	Pdhx (ENSMOCG00000021084) #14	Apip (ENSMOCG00000015378) #15	Ehf (ENSMOCG00000003108) #16	Elf5 (ENSMOCG00000021785) #17	Cat (ENSMOCG00000019198) #18	Abtb2 (ENSMOCG00000013912) #19	Nat10 (ENSMOCG00000021454) #20	Caprin1 (ENSMOCG00000020128) #21	ENSMOCG00000018784	Lmo2 (ENSMOCG00000003531) #22	Fbxo3 (ENSMOCG00000022595) #24	ENSMOCG00000003094 #25	A930018P22Rik (ENSMOCG00000013797) #26	D430041D05Rik (ENSMOCG00000003074) #27	Hipk3 (ENSMOCG00000002204) #29	Cstf3 (ENSMOCG00000017583) #30	Tcp11l1 (ENSMOCG00000017298) #31	Depdc7 (ENSMOCG00000016709) #32	Qser1 (ENSMOCG00000001478) #33	Muc15 (ENSMOCG00000015142)	Ano3 (ENSMOCG00000021978)	Slc5a12 (ENSMOCG00000015104)	Fibin (ENSMOCG00000009161)	Bbox1 (ENSMOCG00000001592)	Ccdc34 (ENSMOCG00000007200)
Northern American deer mouse	MODERN SPECIES	17	Ldlrad3 (ENSPEMG00000010990) #7	Trim44 (ENSPEMG00000030265) #9	Fjx1 (ENSPEMG00000005586)	Pamr1 (ENSPEMG00000012941) #10	Slc1a2 (ENSPEMG00000010827) #11	Cd44 (ENSPEMG00000020598) #13	Pdhx (ENSPEMG00000015465) #14	Apip (ENSPEMG00000012212) #15	Ehf (ENSPEMG00000016561) #16	ENSPEMG00000015756	Elf5 (ENSPEMG00000004489) #17	Cat (ENSPEMG00000005139) #18	Abtb2 (ENSPEMG00000014140) #19	Nat10 (ENSPEMG00000009451) #20	Caprin1 (ENSPEMG00000009832) #21	Lmo2 (ENSPEMG00000000075) #22	Fbxo3 (ENSPEMG00000018420) #24	ENSPEMG00000026456 #25	A930018P22Rik (ENSPEMG00000000170) #26	D430041D05Rik (ENSPEMG00000020969) #27	Hipk3 (ENSPEMG00000000900) #29	Cstf3 (ENSPEMG00000011481) #30	Tcp11l1 (ENSPEMG00000017123) #31	Depdc7 (ENSPEMG00000015544) #32	Qser1 (ENSPEMG00000008956) #33	Prrg4 (ENSPEMG00000017500) #34	ENSPEMG00000015426 #35	Eif3m (ENSPEMG00000011786) #36	Wt1 (ENSPEMG00000001292) #37	Them7 (ENSPEMG00000010578)	Rcn1 (ENSPEMG00000005747)
Murinae	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Mus	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309.j #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Mus_A	ANCESTRAL SPECIES		ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00860000136352	ENSGT00940000153571.b #24	ENSGT00390000016309.j #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Mus_B	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00860000136352	ENSGT00940000153571.b #24	ENSGT00390000016309.j #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Mus_C	ANCESTRAL SPECIES		ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00860000136352	ENSGT00940000153571.b #24	ENSGT00390000016309.j #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
spretus	MODERN SPECIES	11	Commd9 (MGP_SPRETEiJ_G0024915)	Ldlrad3 (MGP_SPRETEiJ_G0024916) #7	Trim44 (MGP_SPRETEiJ_G0024917) #9	Fjx1 (MGP_SPRETEiJ_G0024918)	Pamr1 (MGP_SPRETEiJ_G0024919) #10	Slc1a2 (MGP_SPRETEiJ_G0024920) #11	Cd44 (MGP_SPRETEiJ_G0024921) #13	Pdhx (MGP_SPRETEiJ_G0024922) #14	Apip (MGP_SPRETEiJ_G0024923) #15	Ehf (MGP_SPRETEiJ_G0024924) #16	Elf5 (MGP_SPRETEiJ_G0024925) #17	Cat (MGP_SPRETEiJ_G0024926) #18	Abtb2 (MGP_SPRETEiJ_G0024927) #19	Nat10 (MGP_SPRETEiJ_G0024928) #20	Caprin1 (MGP_SPRETEiJ_G0024929) #21	Lmo2 (MGP_SPRETEiJ_G0024930) #22	MGP_SPRETEiJ_G0024931	Fbxo3 (MGP_SPRETEiJ_G0024932) #24	Cd59a (MGP_SPRETEiJ_G0024933) #25	A930018P22Rik (MGP_SPRETEiJ_G0024935) #26	D430041D05Rik (MGP_SPRETEiJ_G0024936) #27	Hipk3 (MGP_SPRETEiJ_G0024937) #29	MGP_SPRETEiJ_G0024938	Cstf3 (MGP_SPRETEiJ_G0024939) #30	Tcp11l1 (MGP_SPRETEiJ_G0024940) #31	Pin1rt1 (MGP_SPRETEiJ_G0024941)	Depdc7 (MGP_SPRETEiJ_G0024942) #32	Qser1 (MGP_SPRETEiJ_G0024943) #33	Prrg4 (MGP_SPRETEiJ_G0024944) #34	Ccdc73 (MGP_SPRETEiJ_G0024945) #35	Eif3m (MGP_SPRETEiJ_G0024946) #36
Steppe mouse	MODERN SPECIES	12	ENSMSIG00000004991	Trim44 (ENSMSIG00000005008) #9	Fjx1 (ENSMSIG00000005059)	Pamr1 (ENSMSIG00000005073) #10	Slc1a2 (ENSMSIG00000005100) #11	Cd44 (ENSMSIG00000005261) #13	Pdhx (ENSMSIG00000006094) #14	ENSMSIG00000006147 #15	Ehf (ENSMSIG00000006198) #16	Elf5 (ENSMSIG00000006297) #17	Cat (ENSMSIG00000006347) #18	Abtb2 (ENSMSIG00000006424) #19	ENSMSIG00000006529	Nat10 (ENSMSIG00000006539) #20	Caprin1 (ENSMSIG00000006606) #21	Lmo2 (ENSMSIG00000006713) #22	ENSMSIG00000006746	Fbxo3 (ENSMSIG00000006767) #24
Mouse	MODERN SPECIES	11	Commd9 (ENSMUSG00000027163)	Ldlrad3 (ENSMUSG00000048058) #7	Trim44 (ENSMUSG00000027189) #9	Fjx1 (ENSMUSG00000075012)	Pamr1 (ENSMUSG00000027188) #10	Slc1a2 (ENSMUSG00000005089) #11	Cd44 (ENSMUSG00000005087) #13	Pdhx (ENSMUSG00000010914) #14	Apip (ENSMUSG00000010911) #15	Ehf (ENSMUSG00000012350) #16	Elf5 (ENSMUSG00000027186) #17	Cat (ENSMUSG00000027187) #18	Abtb2 (ENSMUSG00000032724) #19	Nat10 (ENSMUSG00000027185) #20	Caprin1 (ENSMUSG00000027184) #21	Lmo2 (ENSMUSG00000032698) #22	Fbxo3 (ENSMUSG00000027180) #24	Cd59b (ENSMUSG00000068686) #25	Cd59a (ENSMUSG00000032679) #25	A930018P22Rik (ENSMUSG00000032671) #26	D430041D05Rik (ENSMUSG00000068373) #27	Hipk3 (ENSMUSG00000027177) #29	Cstf3 (ENSMUSG00000027176) #30	Tcp11l1 (ENSMUSG00000027175) #31	Pin1rt1 (ENSMUSG00000074997)	Depdc7 (ENSMUSG00000027173) #32	Qser1 (ENSMUSG00000074994) #33	Prrg4 (ENSMUSG00000027171) #34	Ccdc73 (ENSMUSG00000045106) #35	Eif3m (ENSMUSG00000027170) #36	Wt1 (ENSMUSG00000016458) #37
Ryukyu mouse	MODERN SPECIES	11	Commd9 (MGP_CAROLIEiJ_G0024005)	Ldlrad3 (MGP_CAROLIEiJ_G0024006) #7	Trim44 (MGP_CAROLIEiJ_G0024007) #9	Fjx1 (MGP_CAROLIEiJ_G0024008)	Pamr1 (MGP_CAROLIEiJ_G0024009) #10	Slc1a2 (MGP_CAROLIEiJ_G0024010) #11	Cd44 (MGP_CAROLIEiJ_G0024011) #13	Pdhx (MGP_CAROLIEiJ_G0024012) #14	Apip (MGP_CAROLIEiJ_G0024013) #15	Ehf (MGP_CAROLIEiJ_G0024014) #16	Elf5 (MGP_CAROLIEiJ_G0024015) #17	Cat (MGP_CAROLIEiJ_G0024016) #18	Abtb2 (MGP_CAROLIEiJ_G0024017) #19	MGP_CAROLIEiJ_G0024018 #20	Caprin1 (MGP_CAROLIEiJ_G0024019) #21	Lmo2 (MGP_CAROLIEiJ_G0024020) #22	MGP_CAROLIEiJ_G0024021	Fbxo3 (MGP_CAROLIEiJ_G0024022) #24	A930018P22Rik (MGP_CAROLIEiJ_G0024023) #26	MGP_CAROLIEiJ_G0024024 #27	Hipk3 (MGP_CAROLIEiJ_G0024025) #29	Cstf3 (MGP_CAROLIEiJ_G0024026) #30	Tcp11l1 (MGP_CAROLIEiJ_G0024027) #31	Pin1rt1 (MGP_CAROLIEiJ_G0024028)	Depdc7 (MGP_CAROLIEiJ_G0024029) #32	Qser1 (MGP_CAROLIEiJ_G0024030) #33	Prrg4 (MGP_CAROLIEiJ_G0024031) #34	Ccdc73 (MGP_CAROLIEiJ_G0024032) #35	Eif3m (MGP_CAROLIEiJ_G0024033) #36	Wt1 (MGP_CAROLIEiJ_G0024034) #37	Them7 (MGP_CAROLIEiJ_G0024035)
Shrew mouse	MODERN SPECIES	16	Commd9 (MGP_PahariEiJ_G0025441)	Ldlrad3 (MGP_PahariEiJ_G0025442) #7	Trim44 (MGP_PahariEiJ_G0025443) #9	Fjx1 (MGP_PahariEiJ_G0025444)	Pamr1 (MGP_PahariEiJ_G0025445) #10	Slc1a2 (MGP_PahariEiJ_G0025446) #11	Cd44 (MGP_PahariEiJ_G0025447) #13	Pdhx (MGP_PahariEiJ_G0025448) #14	Apip (MGP_PahariEiJ_G0025449) #15	Ehf (MGP_PahariEiJ_G0025450) #16	Elf5 (MGP_PahariEiJ_G0025451) #17	Cat (MGP_PahariEiJ_G0025452) #18	Abtb2 (MGP_PahariEiJ_G0025453) #19	Nat10 (MGP_PahariEiJ_G0025454) #20	Caprin1 (MGP_PahariEiJ_G0025455) #21	Lmo2 (MGP_PahariEiJ_G0025456) #22	MGP_PahariEiJ_G0025457	Fbxo3 (MGP_PahariEiJ_G0025458) #24	MGP_PahariEiJ_G0025459 #25	MGP_PahariEiJ_G0025460 #25	A930018P22Rik (MGP_PahariEiJ_G0025461) #26	D430041D05Rik (MGP_PahariEiJ_G0025462) #27	Hipk3 (MGP_PahariEiJ_G0025463) #29	Cstf3 (MGP_PahariEiJ_G0025464) #30	Tcp11l1 (MGP_PahariEiJ_G0025465) #31	Pin1rt1 (MGP_PahariEiJ_G0025466)	Depdc7 (MGP_PahariEiJ_G0025467) #32	Qser1 (MGP_PahariEiJ_G0025468) #33	Prrg4 (MGP_PahariEiJ_G0025469) #34	Ccdc73 (MGP_PahariEiJ_G0025470) #35	Eif3m (MGP_PahariEiJ_G0025471) #36
Rat	MODERN SPECIES	13	Rpl21 (ENSRNOG00000069969)	Trim44 (ENSRNOG00000005191) #9	Fjx1 (ENSRNOG00000005347)	Pamr1 (ENSRNOG00000005348) #10	Slc1a2 (ENSRNOG00000005479) #11	Cd44 (ENSRNOG00000006094) #13	Pdhx (ENSRNOG00000006947) #14	Apip (ENSRNOG00000007446) #15	Ehf (ENSRNOG00000007484) #16	Elf5 (ENSRNOG00000008282) #17	Cat (ENSRNOG00000008364) #18	Abtb2 (ENSRNOG00000008510) #19	Nat10 (ENSRNOG00000008663) #20	Caprin1 (ENSRNOG00000009152) #21	ENSRNOG00000063191	Lmo2 (ENSRNOG00000009401) #22	Fbxo3 (ENSRNOG00000009549) #24	Cd59 (ENSRNOG00000042821) #25	RGD1563222 (ENSRNOG00000010963) #26	LOC100362814 (ENSRNOG00000011132) #27	Hipk3 (ENSRNOG00000011358) #29	Cstf3 (ENSRNOG00000012089) #30	Tcp11l1 (ENSRNOG00000042576) #31	Depdc7 (ENSRNOG00000012262) #32	Qser1 (ENSRNOG00000037514) #33	Prrg4 (ENSRNOG00000022710) #34	RGD1560017 (ENSRNOG00000029262)	Ccdc73 (ENSRNOG00000022660) #35	Eif3m (ENSRNOG00000012738) #36	ENSRNOG00000067112	Wt1 (ENSRNOG00000013074) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	492																Lmo2 (ENSNGAG00000022369) #22	Fbxo3 (ENSNGAG00000008081) #24	ENSNGAG00000023376 #25	A930018P22Rik (ENSNGAG00000021497) #26	D430041D05Rik (ENSNGAG00000018241) #27	ENSNGAG00000013144 #29	Cstf3 (ENSNGAG00000010677) #30	Tcp11l1 (ENSNGAG00000020531) #31	Depdc7 (ENSNGAG00000021367) #32	Qser1 (ENSNGAG00000023077) #33	Prrg4 (ENSNGAG00000021040) #34	ENSNGAG00000023669	Eif3m (ENSNGAG00000006519) #36	Wt1 (ENSNGAG00000022234) #37	Them7 (ENSNGAG00000017585)	Rcn1 (ENSNGAG00000015767)
Lesser Egyptian jerboa	MODERN SPECIES	79	ENSJJAG00000004045	Traf6 (ENSJJAG00000019637)	ENSJJAG00000024040	ENSJJAG00000009576	Pamr1 (ENSJJAG00000002115) #10	ENSJJAG00000012579 #11	ENSJJAG00000017687 #11	ENSJJAG00000024031 #13	Pdhx (ENSJJAG00000007859) #14	ENSJJAG00000011063 #15	Ehf (ENSJJAG00000023839) #16	Elf5 (ENSJJAG00000003357) #17	Cat (ENSJJAG00000012897) #18	Abtb2 (ENSJJAG00000014143) #19	Nat10 (ENSJJAG00000023042) #20	Lmo2 (ENSJJAG00000020848) #22	Fbxo3 (ENSJJAG00000022887) #24	D430041D05Rik (ENSJJAG00000019415) #27	Hipk3 (ENSJJAG00000000303) #29	Cstf3 (ENSJJAG00000018430) #30	Tcp11l1 (ENSJJAG00000002396) #31	Ccdc73 (ENSJJAG00000021731) #35	Eif3m (ENSJJAG00000011546) #36	ENSJJAG00000016942	Pax6 (ENSJJAG00000011854)	Elp4 (ENSJJAG00000020242)	Immp1l (ENSJJAG00000022649)	ENSJJAG00000023854	ENSJJAG00000024039	Mpped2 (ENSJJAG00000003402)	Fshb (ENSJJAG00000011959)
Kangaroo rat	MODERN SPECIES	365	Ldlrad3 (ENSDORG00000027771) #7	Trim44 (ENSDORG00000003756) #9	Fjx1 (ENSDORG00000028183)	Pamr1 (ENSDORG00000009499) #10	ENSDORG00000023527	Slc1a2 (ENSDORG00000014749) #11	ENSDORG00000014748 #13	Pdhx (ENSDORG00000006342) #14	Apip (ENSDORG00000006346) #15	Ehf (ENSDORG00000007642) #16	Elf5 (ENSDORG00000029279) #17	Cat (ENSDORG00000007636) #18	Abtb2 (ENSDORG00000006572) #19	Nat10 (ENSDORG00000006567) #20	Caprin1 (ENSDORG00000006566) #21	Lmo2 (ENSDORG00000010406) #22	Fbxo3 (ENSDORG00000008866) #24	ENSDORG00000026857	A930018P22Rik (ENSDORG00000008868) #26	ENSDORG00000024985	D430041D05Rik (ENSDORG00000012272) #27	Hipk3 (ENSDORG00000008654) #29	Cstf3 (ENSDORG00000005898) #30	Tcp11l1 (ENSDORG00000005896) #31	Depdc7 (ENSDORG00000006010) #32	Qser1 (ENSDORG00000011190) #33	Prrg4 (ENSDORG00000011188) #34	Ccdc73 (ENSDORG00000004144) #35	ENSDORG00000004141 #36	Wt1 (ENSDORG00000013725) #37	Them7 (ENSDORG00000029154)
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000163780	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Pecora	ANCESTRAL SPECIES	7	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000163780.f	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Percora_a	ANCESTRAL SPECIES	6	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000163780.f	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Bovidae	ANCESTRAL SPECIES	6	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000163780.f	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Caprinae	ANCESTRAL SPECIES	6	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000163780.f	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Goat	MODERN SPECIES	6	COMMD9 (ENSCHIG00000020550)	LDLRAD3 (ENSCHIG00000023229) #7	TRIM44 (ENSCHIG00000013533) #9	FJX1 (ENSCHIG00000001972)	PAMR1 (ENSCHIG00000018319) #10	SLC1A2 (ENSCHIG00000026938) #11	CD44 (ENSCHIG00000021491) #13	PDHX (ENSCHIG00000013247) #14	APIP (ENSCHIG00000025799) #15	EHF (ENSCHIG00000010459) #16	ELF5 (ENSCHIG00000014082) #17	CAT (ENSCHIG00000021227) #18	ABTB2 (ENSCHIG00000009432) #19	NAT10 (ENSCHIG00000026081) #20	CAPRIN1 (ENSCHIG00000017561) #21	LMO2 (ENSCHIG00000015059) #22	FBXO3 (ENSCHIG00000016044) #24	ENSCHIG00000003258 #25	C11orf91 (ENSCHIG00000020265) #26	KIAA1549L (ENSCHIG00000010337) #27	HIPK3 (ENSCHIG00000022013) #29	CSTF3 (ENSCHIG00000016418) #30	TCP11L1 (ENSCHIG00000020989) #31	DEPDC7 (ENSCHIG00000027218) #32	QSER1 (ENSCHIG00000016327) #33	ENSCHIG00000025170	PRRG4 (ENSCHIG00000018240) #34	CCDC73 (ENSCHIG00000020414) #35	ENSCHIG00000012027 #36	WT1 (ENSCHIG00000013048) #37	ENSCHIG00000026487
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020017291	COMMD9 (ENSOARG00020017119)	LDLRAD3 (ENSOARG00020016954) #7	TRIM44 (ENSOARG00020016896) #9	FJX1 (ENSOARG00020016861)	PAMR1 (ENSOARG00020016385) #10	SLC1A2 (ENSOARG00020014083) #11	PDHX (ENSOARG00020013235) #14	APIP (ENSOARG00020013162) #15	EHF (ENSOARG00020012876) #16	ELF5 (ENSOARG00020012261) #17	CAT (ENSOARG00020012114) #18	ABTB2 (ENSOARG00020011977) #19	NAT10 (ENSOARG00020011594) #20	CAPRIN1 (ENSOARG00020011413) #21	LMO2 (ENSOARG00020011313) #22	FBXO3 (ENSOARG00020011054) #24	CD59 (ENSOARG00020011000) #25	C11orf91 (ENSOARG00020010944) #26	KIAA1549L (ENSOARG00020010529) #27	HIPK3 (ENSOARG00020010376) #29	CSTF3 (ENSOARG00020009771) #30	TCP11L1 (ENSOARG00020009692) #31	DEPDC7 (ENSOARG00020009610) #32	QSER1 (ENSOARG00020009269) #33	ENSOARG00020009223	PRRG4 (ENSOARG00020009169) #34	EIF3M (ENSOARG00020009058) #36	WT1 (ENSOARG00020008054) #37	ENSOARG00020007984	RCN1 (ENSOARG00020007939)
Bovinae	ANCESTRAL SPECIES	26	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000005908.s.b	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
American bison	MODERN SPECIES	3375	PRR5L (ENSBBBG00000011560)	COMMD9 (ENSBBBG00000002127)	LDLRAD3 (ENSBBBG00000011618) #7	TRIM44 (ENSBBBG00000011629) #9	PAMR1 (ENSBBBG00000011674) #10	SLC1A2 (ENSBBBG00000011827) #11	CD44 (ENSBBBG00000011908) #13	PDHX (ENSBBBG00000008496) #14	APIP (ENSBBBG00000011938) #15	EHF (ENSBBBG00000011971) #16	ELF5 (ENSBBBG00000011994) #17	CAT (ENSBBBG00000002255) #18	ABTB2 (ENSBBBG00000012027) #19	NAT10 (ENSBBBG00000012102) #20	CAPRIN1 (ENSBBBG00000012178) #21	LMO2 (ENSBBBG00000012191) #22	FBXO3 (ENSBBBG00000007069) #24	ENSBBBG00000012235 #25	C11orf91 (ENSBBBG00000012241) #26	KIAA1549L (ENSBBBG00000002311) #27	HIPK3 (ENSBBBG00000012315) #29	CSTF3 (ENSBBBG00000012345) #30	TCP11L1 (ENSBBBG00000012359) #31	DEPDC7 (ENSBBBG00000012370) #32	QSER1 (ENSBBBG00000012381) #33	PRRG4 (ENSBBBG00000012387) #34	ENSBBBG00000012391	ENSBBBG00000002355	EIF3M (ENSBBBG00000012413) #36	WT1 (ENSBBBG00000012437) #37	ENSBBBG00000012441
Bos	ANCESTRAL SPECIES	25	ENSGT00940000160574 #7	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000005908.s.b	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Bos_b	ANCESTRAL SPECIES	12	ENSGT00940000160574 #7	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000005908.s.b	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Cow	MODERN SPECIES	6	COMMD9 (ENSBTAG00000019045)	LDLRAD3 (ENSBTAG00000044158) #7	TRIM44 (ENSBTAG00000037389) #9	FJX1 (ENSBTAG00000047083)	PAMR1 (ENSBTAG00000012630) #10	SLC1A2 (ENSBTAG00000012628) #11	CD44 (ENSBTAG00000011578) #13	PDHX (ENSBTAG00000018261) #14	APIP (ENSBTAG00000018257) #15	EHF (ENSBTAG00000017150) #16	ELF5 (ENSBTAG00000012460) #17	CAT (ENSBTAG00000020980) #18	ABTB2 (ENSBTAG00000005923) #19	NAT10 (ENSBTAG00000016747) #20	CAPRIN1 (ENSBTAG00000016744) #21	LMO2 (ENSBTAG00000006951) #22	FBXO3 (ENSBTAG00000010071) #24	CD59 (ENSBTAG00000002302) #25	C15H11orf91 (ENSBTAG00000027577) #26	KIAA1549L (ENSBTAG00000012846) #27	HIPK3 (ENSBTAG00000014884) #29	CSTF3 (ENSBTAG00000008617) #30	TCP11L1 (ENSBTAG00000008613) #31	DEPDC7 (ENSBTAG00000021809) #32	QSER1 (ENSBTAG00000014399) #33	PRRG4 (ENSBTAG00000020731) #34	ENSBTAG00000054030	ENSBTAG00000049128	EIF3M (ENSBTAG00000005338) #36	WT1 (ENSBTAG00000047268) #37	ENSBTAG00000052796
Hybrid Bos Indicus	MODERN SPECIES	6	LDLRAD3 (ENSBIXG00005007025) #7	ENSBIXG00005016028	TRIM44 (ENSBIXG00005016001) #9	FJX1 (ENSBIXG00005015936)	PAMR1 (ENSBIXG00005002511) #10	SLC1A2 (ENSBIXG00005015820) #11	CD44 (ENSBIXG00005015299) #13	PDHX (ENSBIXG00005002203) #14	APIP (ENSBIXG00005014975) #15	EHF (ENSBIXG00005002187) #16	ELF5 (ENSBIXG00005007013) #17	CAT (ENSBIXG00005005408) #18	ABTB2 (ENSBIXG00005014726) #19	NAT10 (ENSBIXG00005014676) #20	CAPRIN1 (ENSBIXG00005014616) #21	LMO2 (ENSBIXG00005014567) #22	FBXO3 (ENSBIXG00005014542) #24	ENSBIXG00005014479 #25	C11orf91 (ENSBIXG00005014472) #26	KIAA1549L (ENSBIXG00005014441) #27	HIPK3 (ENSBIXG00005001887) #29	CSTF3 (ENSBIXG00005001866) #30	TCP11L1 (ENSBIXG00005014197) #31	DEPDC7 (ENSBIXG00005014101) #32	QSER1 (ENSBIXG00005014048) #33	PRRG4 (ENSBIXG00005013948) #34	CCDC73 (ENSBIXG00005013923) #35	EIF3M (ENSBIXG00005013861) #36	WT1 (ENSBIXG00005005394) #37	ENSBIXG00005013578	RCN1 (ENSBIXG00005013559)
Bos_a	ANCESTRAL SPECIES	36	ENSGT00940000160574 #7	ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000005908.s.b	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Domestic yak	MODERN SPECIES	4	FJX1 (ENSBGRG00000022999)	PAMR1 (ENSBGRG00000022671) #10	ENSBGRG00000022651	SLC1A2 (ENSBGRG00000021839) #11	CD44 (ENSBGRG00000020517) #13	PDHX (ENSBGRG00000020368) #14	APIP (ENSBGRG00000020331) #15	ENSBGRG00000020318	EHF (ENSBGRG00000020179) #16	ENSBGRG00000020151	ELF5 (ENSBGRG00000019841) #17	CAT (ENSBGRG00000019772) #18	ABTB2 (ENSBGRG00000019531) #19	NAT10 (ENSBGRG00000019234) #20	CAPRIN1 (ENSBGRG00000019088) #21	LMO2 (ENSBGRG00000019008) #22	FBXO3 (ENSBGRG00000018736) #24	ENSBGRG00000018697 #25	C11orf91 (ENSBGRG00000018630) #26	KIAA1549L (ENSBGRG00000018177) #27	HIPK3 (ENSBGRG00000018060) #29	CSTF3 (ENSBGRG00000017836) #30	TCP11L1 (ENSBGRG00000017489) #31	DEPDC7 (ENSBGRG00000017219) #32	ENSBGRG00000017187	QSER1 (ENSBGRG00000016588) #33	PRRG4 (ENSBGRG00000016489) #34	CCDC73 (ENSBGRG00000015692) #35	EIF3M (ENSBGRG00000015042) #36	ENSBGRG00000014974	WT1 (ENSBGRG00000014474) #37
Wild yak	MODERN SPECIES	353	PRR5L (ENSBMUG00000009349)	COMMD9 (ENSBMUG00000009313)	LDLRAD3 (ENSBMUG00000009294) #7	TRIM44 (ENSBMUG00000009270) #9	PAMR1 (ENSBMUG00000009249) #10	SLC1A2 (ENSBMUG00000009209) #11	CD44 (ENSBMUG00000008990) #13	PDHX (ENSBMUG00000008856) #14	APIP (ENSBMUG00000008830) #15	EHF (ENSBMUG00000008785) #16	ELF5 (ENSBMUG00000008695) #17	CAT (ENSBMUG00000008657) #18	ABTB2 (ENSBMUG00000008640) #19	NAT10 (ENSBMUG00000008507) #20	CAPRIN1 (ENSBMUG00000008415) #21	LMO2 (ENSBMUG00000008395) #22	ENSBMUG00000008388	FBXO3 (ENSBMUG00000008379) #24	ENSBMUG00000008356 #25	C11orf91 (ENSBMUG00000008344) #26	KIAA1549L (ENSBMUG00000008324) #27	HIPK3 (ENSBMUG00000008279) #29	CSTF3 (ENSBMUG00000008244) #30	TCP11L1 (ENSBMUG00000008189) #31	DEPDC7 (ENSBMUG00000008168) #32	QSER1 (ENSBMUG00000008156) #33	PRRG4 (ENSBMUG00000008106) #34	ENSBMUG00000008082	ENSBMUG00000008058	EIF3M (ENSBMUG00000008048) #36	WT1 (ENSBMUG00000007876) #37
Siberian musk deer	MODERN SPECIES	120			TRIM44 (ENSMMSG00000012109) #9	FJX1 (ENSMMSG00000012126)	PAMR1 (ENSMMSG00000012138) #10	SLC1A2 (ENSMMSG00000012275) #11	CD44 (ENSMMSG00000012911) #13	PDHX (ENSMMSG00000013182) #14	APIP (ENSMMSG00000013211) #15	EHF (ENSMMSG00000013240) #16	ELF5 (ENSMMSG00000013297) #17	CAT (ENSMMSG00000013424) #18	ABTB2 (ENSMMSG00000013452) #19	NAT10 (ENSMMSG00000013533) #20	CAPRIN1 (ENSMMSG00000013695) #21	LMO2 (ENSMMSG00000013814) #22	FBXO3 (ENSMMSG00000013856) #24	ENSMMSG00000013910 #25	C11orf91 (ENSMMSG00000013918) #26	KIAA1549L (ENSMMSG00000013942) #27	HIPK3 (ENSMMSG00000014072) #29	CSTF3 (ENSMMSG00000014200) #30	TCP11L1 (ENSMMSG00000014300) #31	DEPDC7 (ENSMMSG00000014333) #32	QSER1 (ENSMMSG00000014389) #33	PRRG4 (ENSMMSG00000014458) #34	ENSMMSG00000014472	ENSMMSG00000014500 #36	WT1 (ENSMMSG00000014570) #37	ENSMMSG00000015458	RCN1 (ENSMMSG00000015474)
Yarkand deer	MODERN SPECIES		TRIM44 (ENSCHYG00000016460) #9	ENSCHYG00000016423	FJX1 (ENSCHYG00000016393)	PAMR1 (ENSCHYG00000016185) #10	SLC1A2 (ENSCHYG00000013221) #11	CD44 (ENSCHYG00000012096) #13	PDHX (ENSCHYG00000011875) #14	APIP (ENSCHYG00000011773) #15	EHF (ENSCHYG00000011655) #16	ELF5 (ENSCHYG00000011420) #17	ENSCHYG00000011376	ENSCHYG00000011268 #18	ABTB2 (ENSCHYG00000011077) #19	NAT10 (ENSCHYG00000010483) #20	ENSCHYG00000010227 #21	LMO2 (ENSCHYG00000010101) #22	ENSCHYG00000010048	FBXO3 (ENSCHYG00000009875) #24	ENSCHYG00000009843 #25	C11orf91 (ENSCHYG00000009815) #26	KIAA1549L (ENSCHYG00000009646) #27	HIPK3 (ENSCHYG00000009204) #29	ENSCHYG00000009147	CSTF3 (ENSCHYG00000008970) #30	ENSCHYG00000008683 #31	ENSCHYG00000008592 #33	ENSCHYG00000008567	ENSCHYG00000008538 #34	ENSCHYG00000008528	ENSCHYG00000008509	EIF3M (ENSCHYG00000008430) #36
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309.a #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309.a #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309.a #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Dolphin	MODERN SPECIES	436													ABTB2 (ENSTTRG00000007764) #19	NAT10 (ENSTTRG00000007748) #20	CAPRIN1 (ENSTTRG00000007738) #21	LMO2 (ENSTTRG00000007728) #22
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309.a #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309.a #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Narwhal	MODERN SPECIES	314	COMMD9 (ENSMMNG00015020902)	LDLRAD3 (ENSMMNG00015020881) #7	TRIM44 (ENSMMNG00015020855) #9	FJX1 (ENSMMNG00015020839)	PAMR1 (ENSMMNG00015020804) #10	SLC1A2 (ENSMMNG00015020614) #11	CD44 (ENSMMNG00015020401) #13	PDHX (ENSMMNG00015020321) #14	APIP (ENSMMNG00015020302) #15	EHF (ENSMMNG00015020278) #16	ELF5 (ENSMMNG00015020227) #17	CAT (ENSMMNG00015020166) #18	ABTB2 (ENSMMNG00015020118) #19	NAT10 (ENSMMNG00015020058) #20	CAPRIN1 (ENSMMNG00015019955) #21	LMO2 (ENSMMNG00015019906) #22	FBXO3 (ENSMMNG00015019842) #24	ENSMMNG00015019816 #25	C11orf91 (ENSMMNG00015019799) #26	KIAA1549L (ENSMMNG00015019709) #27	HIPK3 (ENSMMNG00015019654) #29	CSTF3 (ENSMMNG00015019509) #30	TCP11L1 (ENSMMNG00015019409) #31	DEPDC7 (ENSMMNG00015019350) #32	QSER1 (ENSMMNG00015019303) #33	PRRG4 (ENSMMNG00015019267) #34	CCDC73 (ENSMMNG00015019158) #35	EIF3M (ENSMMNG00015019072) #36	WT1 (ENSMMNG00015018931) #37	ENSMMNG00015018883	RCN1 (ENSMMNG00015018866)
Beluga whale	MODERN SPECIES	32	PRR5L (ENSDLEG00000012871)	COMMD9 (ENSDLEG00000012880)	LDLRAD3 (ENSDLEG00000012917) #7	TRIM44 (ENSDLEG00000012932) #9	FJX1 (ENSDLEG00000012954)	PAMR1 (ENSDLEG00000012961) #10	SLC1A2 (ENSDLEG00000013009) #11	CD44 (ENSDLEG00000013125) #13	PDHX (ENSDLEG00000013346) #14	APIP (ENSDLEG00000013390) #15	EHF (ENSDLEG00000013404) #16	ELF5 (ENSDLEG00000013416) #17	CAT (ENSDLEG00000013434) #18	ABTB2 (ENSDLEG00000013511) #19	CAPRIN1 (ENSDLEG00000013754) #21	LMO2 (ENSDLEG00000013776) #22	FBXO3 (ENSDLEG00000013801) #24	CD59 (ENSDLEG00000013827) #25	CUNH11orf91 (ENSDLEG00000013835) #26	KIAA1549L (ENSDLEG00000013855) #27	HIPK3 (ENSDLEG00000013963) #29	CSTF3 (ENSDLEG00000014043) #30	TCP11L1 (ENSDLEG00000012541) #31	ENSDLEG00000012554 #32	QSER1 (ENSDLEG00000012566) #33	PRRG4 (ENSDLEG00000012601) #34	ENSDLEG00000012608	CCDC73 (ENSDLEG00000012619) #35	EIF3M (ENSDLEG00000012638) #36	WT1 (ENSDLEG00000012678) #37	ENSDLEG00000013019
Vaquita	MODERN SPECIES	19	LDLRAD3 (ENSPSNG00000019913) #7	TRIM44 (ENSPSNG00000019844) #9	FJX1 (ENSPSNG00000019820)	PAMR1 (ENSPSNG00000019762) #10	SLC1A2 (ENSPSNG00000019163) #11	CD44 (ENSPSNG00000018554) #13	PDHX (ENSPSNG00000018369) #14	APIP (ENSPSNG00000018319) #15	EHF (ENSPSNG00000018151) #16	ELF5 (ENSPSNG00000017789) #17	CAT (ENSPSNG00000017719) #18	ENSPSNG00000017692	ENSPSNG00000017670 #19	NAT10 (ENSPSNG00000017510) #20	CAPRIN1 (ENSPSNG00000017392) #21	LMO2 (ENSPSNG00000017299) #22	FBXO3 (ENSPSNG00000017093) #24	ENSPSNG00000017059 #25	C11orf91 (ENSPSNG00000017031) #26	KIAA1549L (ENSPSNG00000016649) #27	HIPK3 (ENSPSNG00000016514) #29	CSTF3 (ENSPSNG00000016354) #30	TCP11L1 (ENSPSNG00000016253) #31	DEPDC7 (ENSPSNG00000016098) #32	ENSPSNG00000016011	QSER1 (ENSPSNG00000015773) #33	PRRG4 (ENSPSNG00000015680) #34	CCDC73 (ENSPSNG00000015385) #35	EIF3M (ENSPSNG00000015142) #36	WT1 (ENSPSNG00000014606) #37	ENSPSNG00000014483
Sperm whale	MODERN SPECIES	7	LDLRAD3 (ENSPCTG00005013075) #7	TRIM44 (ENSPCTG00005012988) #9	FJX1 (ENSPCTG00005012957)	ENSPCTG00005012912	PAMR1 (ENSPCTG00005012627) #10	SLC1A2 (ENSPCTG00005011641) #11	CD44 (ENSPCTG00005011079) #13	PDHX (ENSPCTG00005010927) #14	APIP (ENSPCTG00005010863) #15	EHF (ENSPCTG00005010749) #16	ELF5 (ENSPCTG00005010589) #17	ENSPCTG00005010549	CAT (ENSPCTG00005010499) #18	NAT10 (ENSPCTG00005009740) #20	CAPRIN1 (ENSPCTG00005009279) #21	LMO2 (ENSPCTG00005009182) #22	FBXO3 (ENSPCTG00005009011) #24	CD59 (ENSPCTG00005008976) #25	C16H11orf91 (ENSPCTG00005016629) #26	KIAA1549L (ENSPCTG00005016154) #27	HIPK3 (ENSPCTG00005016025) #29	CSTF3 (ENSPCTG00005015434) #30	TCP11L1 (ENSPCTG00005015340) #31	DEPDC7 (ENSPCTG00005015057) #32	QSER1 (ENSPCTG00005014791) #33	ENSPCTG00005014763	PRRG4 (ENSPCTG00005014722) #34	CCDC73 (ENSPCTG00005014445) #35	EIF3M (ENSPCTG00005014201) #36	WT1 (ENSPCTG00005013164) #37	ENSPCTG00005013102
Blue whale	MODERN SPECIES	19	LDLRAD3 (ENSBMSG00010013096) #7	ENSBMSG00010013080 #9	FJX1 (ENSBMSG00010013062)	PAMR1 (ENSBMSG00010013047) #10	SLC1A2 (ENSBMSG00010012885) #11	CD44 (ENSBMSG00010012733) #13	ENSBMSG00010012689	PDHX (ENSBMSG00010013305) #14	APIP (ENSBMSG00010013281) #15	EHF (ENSBMSG00010013242) #16	ELF5 (ENSBMSG00010013193) #17	CAT (ENSBMSG00010013166) #18	ABTB2 (ENSBMSG00010013147) #19	NAT10 (ENSBMSG00010013127) #20	CAPRIN1 (ENSBMSG00010013072) #21	LMO2 (ENSBMSG00010013039) #22	ENSBMSG00010013014 #24	ENSBMSG00010012987 #25	C11orf91 (ENSBMSG00010012976) #26	KIAA1549L (ENSBMSG00010012941) #27	HIPK3 (ENSBMSG00010012855) #29	CSTF3 (ENSBMSG00010012787) #30	TCP11L1 (ENSBMSG00010012759) #31	DEPDC7 (ENSBMSG00010012736) #32	QSER1 (ENSBMSG00010012662) #33	ENSBMSG00010012654	PRRG4 (ENSBMSG00010012641) #34	CCDC73 (ENSBMSG00010012604) #35	EIF3M (ENSBMSG00010012516) #36	WT1 (ENSBMSG00010012349) #37	ENSBMSG00010012175
Camelidae	ANCESTRAL SPECIES	25	ENSGT00390000004029.m	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b	ENSGT00410000028070
Arabian camel	MODERN SPECIES	1	ENSCDRG00005014439	COMMD9 (ENSCDRG00005014454)	LDLRAD3 (ENSCDRG00005014562) #7	TRIM44 (ENSCDRG00005014729) #9	PAMR1 (ENSCDRG00005014873) #10	SLC1A2 (ENSCDRG00005015138) #11	CD44 (ENSCDRG00005016811) #13	PDHX (ENSCDRG00005017404) #14	APIP (ENSCDRG00005017467) #15	EHF (ENSCDRG00005017510) #16	ELF5 (ENSCDRG00005017592) #17	CAT (ENSCDRG00005017656) #18	ABTB2 (ENSCDRG00005017710) #19	NAT10 (ENSCDRG00005017893) #20	CAPRIN1 (ENSCDRG00005017986) #21	LMO2 (ENSCDRG00005018050) #22	FBXO3 (ENSCDRG00005018128) #24	C11orf91 (ENSCDRG00005018309) #26	KIAA1549L (ENSCDRG00005018372) #27	HIPK3 (ENSCDRG00005018642) #29	CSTF3 (ENSCDRG00005018752) #30	TCP11L1 (ENSCDRG00005018903) #31	DEPDC7 (ENSCDRG00005018963) #32	QSER1 (ENSCDRG00005019019) #33	PRRG4 (ENSCDRG00005019080) #34	CCDC73 (ENSCDRG00005019107) #35	EIF3M (ENSCDRG00005019201) #36	WT1 (ENSCDRG00005019279) #37	RCN1 (ENSCDRG00005019463)	ENSCDRG00005019471	PAX6 (ENSCDRG00005019478)
Suina	ANCESTRAL SPECIES	34	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000156866.db.b	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Pig	MODERN SPECIES	10	FJX1 (ENSSSCG00000025588)	ENSSSCG00000040861	PAMR1 (ENSSSCG00000028338) #10	SLC1A2 (ENSSSCG00000013296) #11	CD44 (ENSSSCG00000013297) #13	ENSSSCG00000045027	PDHX (ENSSSCG00000013298) #14	ENSSSCG00000058879	APIP (ENSSSCG00000013299) #15	EHF (ENSSSCG00000013300) #16	ELF5 (ENSSSCG00000013301) #17	CAT (ENSSSCG00000013302) #18	ABTB2 (ENSSSCG00000013303) #19	NAT10 (ENSSSCG00000013304) #20	CAPRIN1 (ENSSSCG00000013305) #21	LMO2 (ENSSSCG00000013307) #22	FBXO3 (ENSSSCG00000013308) #24	ENSSSCG00000024791 #25	C11orf91 (ENSSSCG00000013310) #26	KIAA1549L (ENSSSCG00000013311) #27	HIPK3 (ENSSSCG00000013312) #29	CSTF3 (ENSSSCG00000040954) #30	TCP11L1 (ENSSSCG00000030326) #31	DEPDC7 (ENSSSCG00000042341) #32	QSER1 (ENSSSCG00000013314) #33	ENSSSCG00000042766	PRRG4 (ENSSSCG00000013313) #34	CCDC73 (ENSSSCG00000026433) #35	EIF3M (ENSSSCG00000013315) #36	WT1 (ENSSSCG00000013316) #37	ENSSSCG00000024950
Chacoan peccary	MODERN SPECIES	919	LDLRAD3 (ENSCWAG00000021589) #7	TRIM44 (ENSCWAG00000021596) #9	FJX1 (ENSCWAG00000021598)	ENSCWAG00000021601	PAMR1 (ENSCWAG00000021608) #10	SLC1A2 (ENSCWAG00000021640) #11	CD44 (ENSCWAG00000021745) #13	PDHX (ENSCWAG00000021806) #14	APIP (ENSCWAG00000021813) #15	EHF (ENSCWAG00000021818) #16	ELF5 (ENSCWAG00000021834) #17	CAT (ENSCWAG00000021844) #18	ABTB2 (ENSCWAG00000021850) #19	NAT10 (ENSCWAG00000021856) #20	CAPRIN1 (ENSCWAG00000021872) #21	LMO2 (ENSCWAG00000021879) #22	FBXO3 (ENSCWAG00000021882) #24	ENSCWAG00000021889 #25	C11orf91 (ENSCWAG00000021891) #26	KIAA1549L (ENSCWAG00000021895) #27	HIPK3 (ENSCWAG00000021902) #29	CSTF3 (ENSCWAG00000021904) #30	TCP11L1 (ENSCWAG00000021908) #31	DEPDC7 (ENSCWAG00000021910) #32	QSER1 (ENSCWAG00000021912) #33	PRRG4 (ENSCWAG00000021915) #34	ENSCWAG00000003968	EIF3M (ENSCWAG00000004093) #36	WT1 (ENSCWAG00000004225) #37	ENSCWAG00000004835	RCN1 (ENSCWAG00000004859)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Equus	ANCESTRAL SPECIES	56	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00390000004856.w.a.a.b.b.a.a	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00950000182976.a.b #32	ENSGT00940000157402 #31	ENSGT00390000006758.b #30	ENSGT00940000155960.b #29	ENSGT00530000063472.b.b.a.b #27	ENSGT00390000002169 #26	ENSGT00390000016309 #25	ENSGT00940000153571.b #24
Donkey	MODERN SPECIES	8	LDLRAD3 (ENSEASG00005025501) #7	TRIM44 (ENSEASG00005020267) #9	FJX1 (ENSEASG00005020266)	PAMR1 (ENSEASG00005020262) #10	SLC1A2 (ENSEASG00005020253) #11	CD44 (ENSEASG00005020242) #13	ENSEASG00005020239	PDHX (ENSEASG00005020238) #14	ENSEASG00005027939 #15	EHF (ENSEASG00005020235) #16	ELF5 (ENSEASG00005020232) #17	CAT (ENSEASG00005020225) #18	ABTB2 (ENSEASG00005020219) #19	NAT10 (ENSEASG00005020208) #20	ENSEASG00005020196 #21	ENSEASG00005020188 #22	ENSEASG00005020184 #32	TCP11L1 (ENSEASG00005020168) #31	CSTF3 (ENSEASG00005019884) #30	HIPK3 (ENSEASG00005019865) #29	KIAA1549L (ENSEASG00005019863) #27	C11orf91 (ENSEASG00005024402) #26	CD59 (ENSEASG00005034886) #25	ENSEASG00005019857 #24	ENSEASG00005030161	ENSEASG00005036221	ENSEASG00005035921	ENSEASG00005035416	ENSEASG00005037000	ENSEASG00005028704	ENSEASG00005025752
Horse	MODERN SPECIES	3	LDLRAD3 (ENSECAG00000019236) #7	TRIM44 (ENSECAG00000018868) #9	FJX1 (ENSECAG00000006501)	PAMR1 (ENSECAG00000018049) #10	SLC1A2 (ENSECAG00000015644) #11	CD44 (ENSECAG00000010267) #13	ENSECAG00000006372	PDHX (ENSECAG00000008611) #14	APIP (ENSECAG00000006357) #15	EHF (ENSECAG00000000752) #16	ELF5 (ENSECAG00000023321) #17	CAT (ENSECAG00000019408) #18	ABTB2 (ENSECAG00000016829) #19	NAT10 (ENSECAG00000011621) #20	CAPRIN1 (ENSECAG00000007147) #21	LMO2 (ENSECAG00000007061) #22	DEPDC7 (ENSECAG00000001667) #32	TCP11L1 (ENSECAG00000023796) #31	CSTF3 (ENSECAG00000023338) #30	ENSECAG00000054065	HIPK3 (ENSECAG00000020304) #29	C12H11orf91 (ENSECAG00000038947) #26	KIAA1549L (ENSECAG00000018779) #27	CD59 (ENSECAG00000027924) #25	FBXO3 (ENSECAG00000016042) #24
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Megabat	MODERN SPECIES	7005																LMO2 (ENSPVAG00000008528) #22	FBXO3 (ENSPVAG00000008529) #24	ENSPVAG00000008532 #25	C11orf91 (ENSPVAG00000008534) #26	KIAA1549L (ENSPVAG00000008535) #27
Microchiroptera	ANCESTRAL SPECIES	31	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Greater horseshoe bat	MODERN SPECIES	2	LDLRAD3 (ENSRFEG00010004588) #7	TRIM44 (ENSRFEG00010004609) #9	FJX1 (ENSRFEG00010004625)	PAMR1 (ENSRFEG00010004646) #10	SLC1A2 (ENSRFEG00010004715) #11	CD44 (ENSRFEG00010004816) #13	PDHX (ENSRFEG00010004865) #14	APIP (ENSRFEG00010004888) #15	EHF (ENSRFEG00010004916) #16	ELF5 (ENSRFEG00010004964) #17	CAT (ENSRFEG00010004980) #18	ENSRFEG00010004989	ABTB2 (ENSRFEG00010004996) #19	NAT10 (ENSRFEG00010005015) #20	ENSRFEG00010005050 #21	LMO2 (ENSRFEG00010005073) #22	FBXO3 (ENSRFEG00010005119) #24	ENSRFEG00010005183 #25	C11orf91 (ENSRFEG00010005190) #26	KIAA1549L (ENSRFEG00010005232) #27	HIPK3 (ENSRFEG00010005299) #29	ENSRFEG00010005340	CSTF3 (ENSRFEG00010005374) #30	TCP11L1 (ENSRFEG00010005436) #31	DEPDC7 (ENSRFEG00010005465) #32	QSER1 (ENSRFEG00010005548) #33	PRRG4 (ENSRFEG00010005637) #34	ENSRFEG00010005674	CCDC73 (ENSRFEG00010005732) #35	EIF3M (ENSRFEG00010005855) #36	WT1 (ENSRFEG00010006043) #37
Microbat	MODERN SPECIES	1155							PDHX (ENSMLUG00000011702) #14	APIP (ENSMLUG00000015728) #15	EHF (ENSMLUG00000011687) #16	ENSMLUG00000023173	ELF5 (ENSMLUG00000002696) #17	CAT (ENSMLUG00000002685) #18	ABTB2 (ENSMLUG00000016486) #19	NAT10 (ENSMLUG00000016473) #20	CAPRIN1 (ENSMLUG00000016467) #21	LMO2 (ENSMLUG00000003690) #22	FBXO3 (ENSMLUG00000007306) #24	ENSMLUG00000013131 #25	C11orf91 (ENSMLUG00000013619) #26	KIAA1549L (ENSMLUG00000014997) #27	HIPK3 (ENSMLUG00000014987) #29	ENSMLUG00000003073 #30	TCP11L1 (ENSMLUG00000003062) #31	DEPDC7 (ENSMLUG00000003052) #32	QSER1 (ENSMLUG00000010482) #33	PRRG4 (ENSMLUG00000010470) #34	BRSK2 (ENSMLUG00000016128)	PPFIA1 (ENSMLUG00000001700)	FGF3 (ENSMLUG00000016503)	FGF4 (ENSMLUG00000009916)	FGF19 (ENSMLUG00000002512)
Carnivora	ANCESTRAL SPECIES	7	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Felidae	ANCESTRAL SPECIES		ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00390000008610.a.b.a.a.a.a.b	ENSGT00940000155960.b #29	ENSGT00390000015489.r	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Panthera	ANCESTRAL SPECIES	13	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00390000008610.a.b.a.a.a.a.b	ENSGT00990000213820	ENSGT00940000155960.b #29	ENSGT00390000015489.r	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35
Panthera_a	ANCESTRAL SPECIES	20	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00860000135900	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00390000008610.a.b.a.a.a.a.b	ENSGT00990000213820	ENSGT00940000155960.b #29	ENSGT00390000015489.r	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36
lion	MODERN SPECIES	10	COMMD9 (ENSPLOG00000008326)	LDLRAD3 (ENSPLOG00000008283) #7	TRIM44 (ENSPLOG00000008259) #9	FJX1 (ENSPLOG00000008243)	PAMR1 (ENSPLOG00000008067) #10	SLC1A2 (ENSPLOG00000007683) #11	CD44 (ENSPLOG00000007114) #13	PDHX (ENSPLOG00000006867) #14	APIP (ENSPLOG00000006818) #15	EHF (ENSPLOG00000006746) #16	ELF5 (ENSPLOG00000006649) #17	CAT (ENSPLOG00000006594) #18	ABTB2 (ENSPLOG00000006563) #19	NAT10 (ENSPLOG00000006429) #20	CAPRIN1 (ENSPLOG00000006323) #21	LMO2 (ENSPLOG00000006289) #22	FBXO3 (ENSPLOG00000006226) #24	ENSPLOG00000006208 #25	C11orf91 (ENSPLOG00000006184) #26	KIAA1549L (ENSPLOG00000006130) #27	ENSPLOG00000006097	HIPK3 (ENSPLOG00000006037) #29	ENSPLOG00000005985	CSTF3 (ENSPLOG00000005926) #30	TCP11L1 (ENSPLOG00000005895) #31	DEPDC7 (ENSPLOG00000005856) #32	QSER1 (ENSPLOG00000005797) #33	PRRG4 (ENSPLOG00000005765) #34	CCDC73 (ENSPLOG00000005703) #35	EIF3M (ENSPLOG00000005645) #36	WT1 (ENSPLOG00000005490) #37
leopard	MODERN SPECIES	58	LDLRAD3 (ENSPPRG00000021111) #7	TRIM44 (ENSPPRG00000024621) #9	FJX1 (ENSPPRG00000014592)	PAMR1 (ENSPPRG00000024334) #10	SLC1A2 (ENSPPRG00000023959) #11	CD44 (ENSPPRG00000000038) #13	PDHX (ENSPPRG00000001608) #14	APIP (ENSPPRG00000001755) #15	EHF (ENSPPRG00000003174) #16	ELF5 (ENSPPRG00000004467) #17	CAT (ENSPPRG00000004841) #18	ABTB2 (ENSPPRG00000005727) #19	NAT10 (ENSPPRG00000010254) #20	CAPRIN1 (ENSPPRG00000015436) #21	ENSPPRG00000016118	LMO2 (ENSPPRG00000018220) #22	FBXO3 (ENSPPRG00000001019) #24	C11orf91 (ENSPPRG00000001328) #26
Tiger	MODERN SPECIES	167	COMMD9 (ENSPTIG00000015891)	LDLRAD3 (ENSPTIG00000015733) #7	TRIM44 (ENSPTIG00000015209) #9	PAMR1 (ENSPTIG00000014525) #10	SLC1A2 (ENSPTIG00000014147) #11	ENSPTIG00000013480 #13	PDHX (ENSPTIG00000012744) #14	APIP (ENSPTIG00000012600) #15	EHF (ENSPTIG00000012053) #16	ELF5 (ENSPTIG00000011739) #17	CAT (ENSPTIG00000011430) #18	ABTB2 (ENSPTIG00000011181) #19	NAT10 (ENSPTIG00000010705) #20	CAPRIN1 (ENSPTIG00000009952) #21	ENSPTIG00000009923	LMO2 (ENSPTIG00000009865) #22	FBXO3 (ENSPTIG00000009375) #24	ENSPTIG00000009249	C11orf91 (ENSPTIG00000009247) #26	KIAA1549L (ENSPTIG00000008984) #27	HIPK3 (ENSPTIG00000008849) #29	CSTF3 (ENSPTIG00000008716) #30	TCP11L1 (ENSPTIG00000008558) #31	DEPDC7 (ENSPTIG00000008465) #32	QSER1 (ENSPTIG00000008208) #33	PRRG4 (ENSPTIG00000008151) #34	ENSPTIG00000008134	EIF3M (ENSPTIG00000007758) #36	WT1 (ENSPTIG00000007474) #37	ENSPTIG00000007330	RCN1 (ENSPTIG00000007248)
Cat	MODERN SPECIES	241	LDLRAD3 (ENSFCAG00000040060) #7	TRIM44 (ENSFCAG00000025850) #9	FJX1 (ENSFCAG00000046575)	PAMR1 (ENSFCAG00000005892) #10	SLC1A2 (ENSFCAG00000005890) #11	CD44 (ENSFCAG00000005887) #13	PDHX (ENSFCAG00000023884) #14	APIP (ENSFCAG00000002557) #15	EHF (ENSFCAG00000036037) #16	ELF5 (ENSFCAG00000022294) #17	CAT (ENSFCAG00000002030) #18	ABTB2 (ENSFCAG00000002029) #19	NAT10 (ENSFCAG00000002028) #20	CAPRIN1 (ENSFCAG00000030411) #21	ENSFCAG00000013842	LMO2 (ENSFCAG00000036087) #22	FBXO3 (ENSFCAG00000010140) #24	ENSFCAG00000053575 #25	CD1H11orf91 (ENSFCAG00000029946) #26	KIAA1549L (ENSFCAG00000010134) #27	ENSFCAG00000048892	HIPK3 (ENSFCAG00000023639) #29	ENSFCAG00000045275	CSTF3 (ENSFCAG00000030711) #30	TCP11L1 (ENSFCAG00000026555) #31	DEPDC7 (ENSFCAG00000032004) #32	QSER1 (ENSFCAG00000015204) #33	PRRG4 (ENSFCAG00000015202) #34	CCDC73 (ENSFCAG00000025569) #35	EIF3M (ENSFCAG00000000310) #36	WT1 (ENSFCAG00000000308) #37
Caniformia	ANCESTRAL SPECIES	25	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37
Canidae	ANCESTRAL SPECIES	32	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.b ##13	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Canis_lupus	ANCESTRAL SPECIES	7	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.b ##13	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Dog	MODERN SPECIES	9	LDLRAD3 (ENSCAFG00845020785) #7	TRIM44 (ENSCAFG00845020854) #9	PAMR1 (ENSCAFG00845020986) #10	FJX1 (ENSCAFG00845021321)	SLC1A2 (ENSCAFG00845021493) #11	ENSCAFG00845022224	CD44 (ENSCAFG00845022357) #13	PDHX (ENSCAFG00845023240) #14	ENSCAFG00845023357 #15	EHF (ENSCAFG00845023567) #16	ELF5 (ENSCAFG00845023760) #17	CAT (ENSCAFG00845024098) #18	ABTB2 (ENSCAFG00845024235) #19	NAT10 (ENSCAFG00845024338) #20	CAPRIN1 (ENSCAFG00845024554) #21	ENSCAFG00845024754 #22	FBXO3 (ENSCAFG00845024924) #24	ENSCAFG00845025193 #25	C18H11orf91 (ENSCAFG00845025250) #26	KIAA1549L (ENSCAFG00845025341) #27	ENSCAFG00845025562	HIPK3 (ENSCAFG00845025615) #29	CSTF3 (ENSCAFG00845026044) #30	TCP11L1 (ENSCAFG00845026199) #31	ENSCAFG00845026364	DEPDC7 (ENSCAFG00845026430) #32	QSER1 (ENSCAFG00845026553) #33	PRRG4 (ENSCAFG00845026825) #34	CCDC73 (ENSCAFG00845026876) #35	EIF3M (ENSCAFG00845027029) #36	WT1 (ENSCAFG00845027359) #37
Dingo	MODERN SPECIES	69	LDLRAD3 (ENSCAFG00020006398) #7	TRIM44 (ENSCAFG00020006383) #9	FJX1 (ENSCAFG00020006380)	PAMR1 (ENSCAFG00020006373) #10	SLC1A2 (ENSCAFG00020005675) #11	ENSCAFG00020005623 ##13	ENSCAFG00020005617 #13	PDHX (ENSCAFG00020005609) #14	APIP (ENSCAFG00020005596) #15	EHF (ENSCAFG00020005591) #16	ELF5 (ENSCAFG00020005583) #17	CAT (ENSCAFG00020005081) #18	ABTB2 (ENSCAFG00020004564) #19	NAT10 (ENSCAFG00020004530) #20	CAPRIN1 (ENSCAFG00020004525) #21	LMO2 (ENSCAFG00020004522) #22	ENSCAFG00020004519 #24	FBXO3 (ENSCAFG00020004513) #24	ENSCAFG00020004510 #25	C11orf91 (ENSCAFG00020004506) #26	KIAA1549L (ENSCAFG00020004434) #27	ENSCAFG00020004425	ENSCAFG00020004418	HIPK3 (ENSCAFG00020003548) #29	CSTF3 (ENSCAFG00020002715) #30	TCP11L1 (ENSCAFG00020002659) #31	DEPDC7 (ENSCAFG00020002651) #32	QSER1 (ENSCAFG00020002643) #33	PRRG4 (ENSCAFG00020002639) #34	ENSCAFG00020002628	EIF3M (ENSCAFG00020002623) #36
Red fox	MODERN SPECIES	94	LDLRAD3 (ENSVVUG00000006994) #7	TRIM44 (ENSVVUG00000007028) #9	PAMR1 (ENSVVUG00000007035) #10	SLC1A2 (ENSVVUG00000007051) #11	ENSVVUG00000007088	ENSVVUG00000007105 #13	PDHX (ENSVVUG00000007134) #14	APIP (ENSVVUG00000007155) #15	ENSVVUG00000007187 #16	ENSVVUG00000007189 #16	ELF5 (ENSVVUG00000007199) #17	CAT (ENSVVUG00000007313) #18	ABTB2 (ENSVVUG00000010052) #19	NAT10 (ENSVVUG00000010185) #20	CAPRIN1 (ENSVVUG00000010396) #21	LMO2 (ENSVVUG00000014876) #22	FBXO3 (ENSVVUG00000014883) #24	CD59 (ENSVVUG00000014886) #25	C11orf91 (ENSVVUG00000014887) #26	KIAA1549L (ENSVVUG00000014889) #27	HIPK3 (ENSVVUG00000014907) #29	CSTF3 (ENSVVUG00000014938) #30	TCP11L1 (ENSVVUG00000016160) #31	DEPDC7 (ENSVVUG00000016168) #32	QSER1 (ENSVVUG00000016190) #33	PRRG4 (ENSVVUG00000016211) #34	CCDC73 (ENSVVUG00000016222) #35	EIF3M (ENSVVUG00000016291) #36	WT1 (ENSVVUG00000016328) #37	ENSVVUG00000016450	ENSVVUG00000016451
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983
Ursidae	ANCESTRAL SPECIES	2	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310.f #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456.j #36	ENSGT00940000156734 #37	ENSGT00730000111983
Ursus	ANCESTRAL SPECIES	69	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310.f #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456.j #36	ENSGT00940000156734 #37	ENSGT00730000111983
American black bear	MODERN SPECIES	2304																LMO2 (ENSUAMG00000022180) #22	FBXO3 (ENSUAMG00000022181) #24	ENSUAMG00000022183 #25	C11orf91 (ENSUAMG00000022184) #26	KIAA1549L (ENSUAMG00000022185) #27
Polar bear	MODERN SPECIES	141	PRR5L (ENSUMAG00000017453)	COMMD9 (ENSUMAG00000017457)	LDLRAD3 (ENSUMAG00000017460) #7	TRIM44 (ENSUMAG00000017467) #9	PAMR1 (ENSUMAG00000017480) #10	SLC1A2 (ENSUMAG00000017517) #11	CD44 (ENSUMAG00000017982) #13	PDHX (ENSUMAG00000018023) #14	APIP (ENSUMAG00000018044) #15	EHF (ENSUMAG00000018075) #16	ELF5 (ENSUMAG00000018100) #17	CAT (ENSUMAG00000018116) #18	ENSUMAG00000018139 #19	NAT10 (ENSUMAG00000018144) #20	CAPRIN1 (ENSUMAG00000018261) #21	LMO2 (ENSUMAG00000018838) #22	FBXO3 (ENSUMAG00000018845) #24	ENSUMAG00000018860 #25	KIAA1549L (ENSUMAG00000018865) #27	HIPK3 (ENSUMAG00000018921) #29	CSTF3 (ENSUMAG00000018971) #30	TCP11L1 (ENSUMAG00000019415) #31	DEPDC7 (ENSUMAG00000019420) #32	QSER1 (ENSUMAG00000019428) #33	PRRG4 (ENSUMAG00000019477) #34	ENSUMAG00000019484	ENSUMAG00000019488 #35	EIF3M (ENSUMAG00000019493) #36	WT1 (ENSUMAG00000019514) #37	ENSUMAG00000019525	RCN1 (ENSUMAG00000019528)
Giant Panda	MODERN SPECIES	7	PRR5L (ENSAMEG00000013834)	COMMD9 (ENSAMEG00000013820)	LDLRAD3 (ENSAMEG00000013817) #7	TRIM44 (ENSAMEG00000030107) #9	PAMR1 (ENSAMEG00000007801) #10	SLC1A2 (ENSAMEG00000007834) #11	CD44 (ENSAMEG00000007891) #13	PDHX (ENSAMEG00000007973) #14	APIP (ENSAMEG00000008004) #15	EHF (ENSAMEG00000008016) #16	ELF5 (ENSAMEG00000008027) #17	CAT (ENSAMEG00000008040) #18	ABTB2 (ENSAMEG00000008073) #19	NAT10 (ENSAMEG00000008124) #20	CAPRIN1 (ENSAMEG00000008137) #21	LMO2 (ENSAMEG00000024401) #22	FBXO3 (ENSAMEG00000007335) #24	ENSAMEG00000007332 #25	C11orf91 (ENSAMEG00000007331) #26	KIAA1549L (ENSAMEG00000007317) #27	HIPK3 (ENSAMEG00000007251) #29	CSTF3 (ENSAMEG00000007187) #30	TCP11L1 (ENSAMEG00000007130) #31	DEPDC7 (ENSAMEG00000007096) #32	QSER1 (ENSAMEG00000007081) #33	PRRG4 (ENSAMEG00000025563) #34	ENSAMEG00000025855	ENSAMEG00000025566	ENSAMEG00000007045 #35	EIF3M (ENSAMEG00000007020) #36	WT1 (ENSAMEG00000006957) #37
Mustelinae	ANCESTRAL SPECIES	30	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b
Ferret	MODERN SPECIES	213	TRIM44 (ENSMPUG00000011720) #9	PAMR1 (ENSMPUG00000011711) #10	ENSMPUG00000011703	SLC1A2 (ENSMPUG00000011697) #11	CD44 (ENSMPUG00000011692) #13	ENSMPUG00000011691	PDHX (ENSMPUG00000011686) #14	APIP (ENSMPUG00000011681) #15	ENSMPUG00000019961	EHF (ENSMPUG00000011676) #16	ELF5 (ENSMPUG00000011669) #17	CAT (ENSMPUG00000011661) #18	ABTB2 (ENSMPUG00000011650) #19	NAT10 (ENSMPUG00000011636) #20	CAPRIN1 (ENSMPUG00000011533) #21	LMO2 (ENSMPUG00000011529) #22	FBXO3 (ENSMPUG00000011527) #24	ENSMPUG00000011525 #25	KIAA1549L (ENSMPUG00000011479) #27	HIPK3 (ENSMPUG00000011469) #29	CSTF3 (ENSMPUG00000011457) #30	TCP11L1 (ENSMPUG00000011348) #31	DEPDC7 (ENSMPUG00000011342) #32	QSER1 (ENSMPUG00000011334) #33	PRRG4 (ENSMPUG00000011329) #34	CCDC73 (ENSMPUG00000011318) #35	EIF3M (ENSMPUG00000011311) #36	WT1 (ENSMPUG00000011307) #37	ENSMPUG00000011303	RCN1 (ENSMPUG00000011298)	PAX6 (ENSMPUG00000011295)
American mink	MODERN SPECIES	206	LDLRAD3 (ENSNVIG00000010613) #7	TRIM44 (ENSNVIG00000010658) #9	FJX1 (ENSNVIG00000010696)	PAMR1 (ENSNVIG00000010713) #10	SLC1A2 (ENSNVIG00000010815) #11	CD44 (ENSNVIG00000011008) #13	PDHX (ENSNVIG00000011353) #14	APIP (ENSNVIG00000011384) #15	EHF (ENSNVIG00000011394) #16	ELF5 (ENSNVIG00000011461) #17	CAT (ENSNVIG00000011546) #18	ENSNVIG00000011573	ABTB2 (ENSNVIG00000011580) #19	NAT10 (ENSNVIG00000011618) #20	CAPRIN1 (ENSNVIG00000011682) #21	LMO2 (ENSNVIG00000011819) #22	FBXO3 (ENSNVIG00000011833) #24	ENSNVIG00000011905 #25	C11orf91 (ENSNVIG00000011918) #26
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000160199 #22
Hedgehog	MODERN SPECIES	14850																LMO2 (ENSEEUG00000003627) #22
Common shrew	MODERN SPECIES	11267																LMO2 (ENSSARG00000005794) #22
Atlantogenata	ANCESTRAL SPECIES	13	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a
Afrotheria	ANCESTRAL SPECIES	16	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443
Afrotheria_a	ANCESTRAL SPECIES	17	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443
Elephant	MODERN SPECIES	209	COMMD9 (ENSLAFG00000001396)	LDLRAD3 (ENSLAFG00000017028) #7	TRIM44 (ENSLAFG00000016722) #9	FJX1 (ENSLAFG00000026391)	PAMR1 (ENSLAFG00000017692) #10	SLC1A2 (ENSLAFG00000017684) #11	CD44 (ENSLAFG00000017676) #13	PDHX (ENSLAFG00000013165) #14	APIP (ENSLAFG00000013662) #15	EHF (ENSLAFG00000011235) #16	ELF5 (ENSLAFG00000005823) #17	CAT (ENSLAFG00000005810) #18	ABTB2 (ENSLAFG00000030946) #19	NAT10 (ENSLAFG00000012393) #20	CAPRIN1 (ENSLAFG00000012387) #21	LMO2 (ENSLAFG00000008865) #22	ENSLAFG00000026975	FBXO3 (ENSLAFG00000004396) #24	C11orf91 (ENSLAFG00000006492) #26	KIAA1549L (ENSLAFG00000022670) #27	HIPK3 (ENSLAFG00000013962) #29	CSTF3 (ENSLAFG00000008712) #30	TCP11L1 (ENSLAFG00000008708) #31	DEPDC7 (ENSLAFG00000008704) #32	QSER1 (ENSLAFG00000029805) #33	PRRG4 (ENSLAFG00000005201) #34	CCDC73 (ENSLAFG00000009655) #35	EIF3M (ENSLAFG00000021669) #36	WT1 (ENSLAFG00000006160) #37	RCN1 (ENSLAFG00000010550)	PAX6 (ENSLAFG00000015520)
Xenarthra	ANCESTRAL SPECIES	30	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b #30	ENSGT00940000157402 #31	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT00730000111983	ENSGT01010000222360.D.b	ENSGT00940000155391.a	ENSGT00390000001443
Armadillo	MODERN SPECIES	307	COMMD9 (ENSDNOG00000043431)	LDLRAD3 (ENSDNOG00000017788) #7	TRIM44 (ENSDNOG00000008427) #9	FJX1 (ENSDNOG00000042436)	PAMR1 (ENSDNOG00000000119) #10	SLC1A2 (ENSDNOG00000000116) #11	CD44 (ENSDNOG00000000112) #13	PDHX (ENSDNOG00000008267) #14	APIP (ENSDNOG00000008263) #15	EHF (ENSDNOG00000039646) #16	ELF5 (ENSDNOG00000017462) #17	CAT (ENSDNOG00000017459) #18	ABTB2 (ENSDNOG00000018626) #19	NAT10 (ENSDNOG00000042452) #20	ENSDNOG00000031223 #21	LMO2 (ENSDNOG00000032989) #22	FBXO3 (ENSDNOG00000006486) #24	C11orf91 (ENSDNOG00000048791) #26	KIAA1549L (ENSDNOG00000014287) #27	HIPK3 (ENSDNOG00000018007) #29	CSTF3 (ENSDNOG00000007366) #30	TCP11L1 (ENSDNOG00000012436) #31	QSER1 (ENSDNOG00000046771) #33	PRRG4 (ENSDNOG00000025156) #34	CCDC73 (ENSDNOG00000012922) #35	EIF3M (ENSDNOG00000012904) #36	ENSDNOG00000048344	WT1 (ENSDNOG00000003652) #37	ENSDNOG00000045369	ENSDNOG00000044782	PAX6 (ENSDNOG00000000761)
Marsupialia	ANCESTRAL SPECIES	7	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b.a #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b.a #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b
Diprotodontia	ANCESTRAL SPECIES	46	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b.a #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b
Diprotodontia_a	ANCESTRAL SPECIES	46	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00390000002169 #26	ENSGT00530000063472.b.b.a.b #27	ENSGT00940000155960.b #29	ENSGT00390000006758.b.a #30	ENSGT00940000157402 #31	ENSGT00950000182976.a.b #32	ENSGT00440000037417.A #33	ENSGT00940000158268.a #34	ENSGT00940000164881	ENSGT00390000013482 #35	ENSGT00390000004456 #36	ENSGT00940000156734 #37	ENSGT01010000222360.D.b
Common wonbat	MODERN SPECIES	1058	PRR5L (ENSVURG00010011749)	COMMD9 (ENSVURG00010011757)	LDLRAD3 (ENSVURG00010011775) #7	FJX1 (ENSVURG00010011780)	PAMR1 (ENSVURG00010011784) #10	SLC1A2 (ENSVURG00010011805) #11	ENSVURG00010011839 #13	PDHX (ENSVURG00010011855) #14	APIP (ENSVURG00010011869) #15	EHF (ENSVURG00010011886) #16	ELF5 (ENSVURG00010011912) #17	CAT (ENSVURG00010011928) #18	ABTB2 (ENSVURG00010011975) #19	NAT10 (ENSVURG00010012623) #20	CAPRIN1 (ENSVURG00010012674) #21	LMO2 (ENSVURG00010012705) #22	FBXO3 (ENSVURG00010012709) #24	ENSVURG00010012719 #25	KIAA1549L (ENSVURG00010012738) #27	HIPK3 (ENSVURG00010012975) #29	ENSVURG00010013024 #30	TCP11L1 (ENSVURG00010013070) #31	DEPDC7 (ENSVURG00010013084) #32	QSER1 (ENSVURG00010013101) #33	PRRG4 (ENSVURG00010013112) #34	ENSVURG00010013117	EIF3M (ENSVURG00010013122) #36	WT1 (ENSVURG00010013148) #37	RCN1 (ENSVURG00010013320)	ENSVURG00010013326	PAX6 (ENSVURG00010013364)
koala	MODERN SPECIES	148	LDLRAD3 (ENSPCIG00000025145) #7	ENSPCIG00000030886 #9	FJX1 (ENSPCIG00000013864)	PAMR1 (ENSPCIG00000036918) #10	ENSPCIG00000033347 #11	ENSPCIG00000001222 #11	ENSPCIG00000001108 #13	PDHX (ENSPCIG00000001071) #14	APIP (ENSPCIG00000001058) #15	EHF (ENSPCIG00000000856) #16	ELF5 (ENSPCIG00000019729) #17	CAT (ENSPCIG00000019730) #18	ABTB2 (ENSPCIG00000026315) #19	NAT10 (ENSPCIG00000026378) #20	CAPRIN1 (ENSPCIG00000026381) #21	LMO2 (ENSPCIG00000032881) #22	FBXO3 (ENSPCIG00000026386) #24	ENSPCIG00000031932 #25	C11orf91 (ENSPCIG00000026389) #26	KIAA1549L (ENSPCIG00000026390) #27	HIPK3 (ENSPCIG00000026397) #29	ENSPCIG00000026406 #30	TCP11L1 (ENSPCIG00000033301) #31	DEPDC7 (ENSPCIG00000009976) #32	QSER1 (ENSPCIG00000024688) #33	PRRG4 (ENSPCIG00000024686) #34	ENSPCIG00000004235	ENSPCIG00000004250 #35	ENSPCIG00000004258 #36	WT1 (ENSPCIG00000034617) #37	RCN1 (ENSPCIG00000004288)
Tasmanian devil	MODERN SPECIES	5	COMMD9 (ENSSHAG00000013073)	LDLRAD3 (ENSSHAG00000030828) #7	ENSSHAG00000027936 #9	PAMR1 (ENSSHAG00000006602) #10	SLC1A2 (ENSSHAG00000003454) #11	ENSSHAG00000027755 #13	ENSSHAG00000021071	PDHX (ENSSHAG00000029847) #14	APIP (ENSSHAG00000011523) #15	EHF (ENSSHAG00000010046) #16	ELF5 (ENSSHAG00000025368) #17	CAT (ENSSHAG00000007671) #18	ABTB2 (ENSSHAG00000004178) #19	NAT10 (ENSSHAG00000003443) #20	CAPRIN1 (ENSSHAG00000002731) #21	LMO2 (ENSSHAG00000018647) #22	FBXO3 (ENSSHAG00000018609) #24	ENSSHAG00000031082	KIAA1549L (ENSSHAG00000018497) #27	HIPK3 (ENSSHAG00000018303) #29	CSTF3 (ENSSHAG00000018128) #30	TCP11L1 (ENSSHAG00000018104) #31	DEPDC7 (ENSSHAG00000026677) #32	QSER1 (ENSSHAG00000018007) #33	PRRG4 (ENSSHAG00000028281) #34	CCDC73 (ENSSHAG00000030516) #35	EIF3M (ENSSHAG00000017641) #36	WT1 (ENSSHAG00000027965) #37	RCN1 (ENSSHAG00000017010)	PAX6 (ENSSHAG00000016310)	ELP4 (ENSSHAG00000015701)
Platypus	MODERN SPECIES	14	LDLRAD3 (ENSOANG00000031345) #7	ENSOANG00000007388 #9	ENSOANG00000036464	FJX1 (ENSOANG00000044309)	PAMR1 (ENSOANG00000007389) #10	SLC1A2 (ENSOANG00000007391) #11	ENSOANG00000007392 #13	PDHX (ENSOANG00000007393) #14	APIP (ENSOANG00000007394) #15	EHF (ENSOANG00000007395) #16	ELF5 (ENSOANG00000007396) #17	CAT (ENSOANG00000007397) #18	ABTB2 (ENSOANG00000007399) #19	NAT10 (ENSOANG00000007400) #20	CAPRIN1 (ENSOANG00000007402) #21	LMO2 (ENSOANG00000042666) #22	FBXO3 (ENSOANG00000007403) #24	ENSOANG00000007404	ENSOANG00000007405	SHANK2 (ENSOANG00000007407)	CTTN (ENSOANG00000007408)	PPFIA1 (ENSOANG00000007409)	ENSOANG00000049034	ANO1 (ENSOANG00000007411)	ENSOANG00000007412	FGF4 (ENSOANG00000046993)	FGF19 (ENSOANG00000007414)	LTO1 (ENSOANG00000007415)	CCND1 (ENSOANG00000037670)	TPCN2 (ENSOANG00000011298)	NADSYN1 (ENSOANG00000011297)
Sauria	ANCESTRAL SPECIES	3	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Lepidosauria	ANCESTRAL SPECIES	10	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00940000157530.b	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000166897
tuatara	MODERN SPECIES	181													ABTB2 (ENSSPUG00000010543) #19	ENSSPUG00000010599 #20	CAPRIN1 (ENSSPUG00000010728) #21	LMO2 (ENSSPUG00000010772) #22	FBXO3 (ENSSPUG00000010791) #24	CD59 (ENSSPUG00000010812) #25	ENSSPUG00000010817	ENSSPUG00000010851	ENSSPUG00000010916
Episquamata	ANCESTRAL SPECIES		ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00940000157530.b	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000166897
Laterata	ANCESTRAL SPECIES	2	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES		FJX1 (ENSPMRG00000000356)	PAMR1 (ENSPMRG00000000371) #10	SLC1A2 (ENSPMRG00000000412) #11	ENSPMRG00000000537 #13	ENSPMRG00000000735 #13	PDHX (ENSPMRG00000000757) #14	APIP (ENSPMRG00000000792) #15	EHF (ENSPMRG00000000817) #16	ENSPMRG00000000841	ELF5 (ENSPMRG00000000851) #17	ENSPMRG00000001009 #18	ENSPMRG00000001451 #18	ABTB2 (ENSPMRG00000001695) #19	NAT10 (ENSPMRG00000002034) #20	CAPRIN1 (ENSPMRG00000002292) #21	ENSPMRG00000002635 #22	FBXO3 (ENSPMRG00000002648) #24	ENSPMRG00000002662 #25	ENSPMRG00000002665 #22	ENSPMRG00000002671 #25	ENSPMRG00000002678	ENSPMRG00000002685	SHANK2 (ENSPMRG00000002826)	CTTN (ENSPMRG00000003359)	PPFIA1 (ENSPMRG00000003817)	FADD (ENSPMRG00000006296)	ANO1 (ENSPMRG00000006308)	FGF3 (ENSPMRG00000006361)	FGF4 (ENSPMRG00000006363)	ENSPMRG00000006367	FGF19 (ENSPMRG00000006374)
Common wall lizard	MODERN SPECIES		TPCN2 (ENSPMRG00000006421)	CCND1 (ENSPMRG00000006384)	LTO1 (ENSPMRG00000006379)	FGF19 (ENSPMRG00000006374)	ENSPMRG00000006367	FGF4 (ENSPMRG00000006363)	FGF3 (ENSPMRG00000006361)	ANO1 (ENSPMRG00000006308)	FADD (ENSPMRG00000006296)	PPFIA1 (ENSPMRG00000003817)	CTTN (ENSPMRG00000003359)	SHANK2 (ENSPMRG00000002826)	ENSPMRG00000002685	ENSPMRG00000002678	ENSPMRG00000002671 #25	ENSPMRG00000002665 #22	ENSPMRG00000002662 #25	FBXO3 (ENSPMRG00000002648) #24	ENSPMRG00000002635 #22	CAPRIN1 (ENSPMRG00000002292) #21	NAT10 (ENSPMRG00000002034) #20	ABTB2 (ENSPMRG00000001695) #19	ENSPMRG00000001451 #18	ENSPMRG00000001009 #18	ELF5 (ENSPMRG00000000851) #17	ENSPMRG00000000841	EHF (ENSPMRG00000000817) #16	APIP (ENSPMRG00000000792) #15	PDHX (ENSPMRG00000000757) #14	ENSPMRG00000000735 #13	ENSPMRG00000000537 #13
Argentine black and white tegu	MODERN SPECIES	3	COMMD9 (ENSSMRG00000004711)	LDLRAD3 (ENSSMRG00000004689) #7	TRIM44 (ENSSMRG00000004604) #9	FJX1 (ENSSMRG00000004580)	PAMR1 (ENSSMRG00000004579) #10	SLC1A2 (ENSSMRG00000004495) #11	ENSSMRG00000004484 #13	PDHX (ENSSMRG00000004403) #14	APIP (ENSSMRG00000004332) #15	EHF (ENSSMRG00000004321) #16	ELF5 (ENSSMRG00000004308) #17	CAT (ENSSMRG00000004301) #18	ABTB2 (ENSSMRG00000004293) #19	NAT10 (ENSSMRG00000004273) #20	CAPRIN1 (ENSSMRG00000004255) #21	LMO2 (ENSSMRG00000004237) #22	FBXO3 (ENSSMRG00000004236) #24	CD59 (ENSSMRG00000004233) #25	ENSSMRG00000004220	ENSSMRG00000004212	ENSSMRG00000004210	SHANK2 (ENSSMRG00000004195)	CTTN (ENSSMRG00000004171)	PPFIA1 (ENSSMRG00000004131)	FADD (ENSSMRG00000004117)	ANO1 (ENSSMRG00000004087)	ENSSMRG00000004072	FGF3 (ENSSMRG00000004069)	FGF4 (ENSSMRG00000004065)	FGF19 (ENSSMRG00000004061)	ENSSMRG00000004057
Toxicofera	ANCESTRAL SPECIES	5	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00940000157530.b	ENSGT00730000111007.a.b	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00940000166897	ENSGT00940000157816	ENSGT00940000159763
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	3	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100.n #18	ENSGT00390000018100.m #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199.e #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000153561.b.a.a.b.vc.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00940000166897	ENSGT00940000157816	ENSGT00940000159763	ENSGT00390000010152
Indian cobra	MODERN SPECIES		COMMD9 (ENSNNAG00000008937)	LDLRAD3 (ENSNNAG00000008866) #7	ENSNNAG00000008809	PAMR1 (ENSNNAG00000008663) #10	SLC1A2 (ENSNNAG00000008116) #11	ENSNNAG00000008038 #13	PDHX (ENSNNAG00000007989) #14	APIP (ENSNNAG00000007952) #15	EHF (ENSNNAG00000007936) #16	ELF5 (ENSNNAG00000007913) #17	ENSNNAG00000007866 #18	ENSNNAG00000007572 #18	ABTB2 (ENSNNAG00000007462) #19	NAT10 (ENSNNAG00000007401) #20	CAPRIN1 (ENSNNAG00000007267) #21	LMO2 (ENSNNAG00000007220) #22	FBXO3 (ENSNNAG00000007197) #24	CD59 (ENSNNAG00000007176) #25	ENSNNAG00000007168	SHANK2 (ENSNNAG00000006944)	CTTN (ENSNNAG00000006882)	PPFIA1 (ENSNNAG00000006663)	FADD (ENSNNAG00000006633)	ANO1 (ENSNNAG00000006590)	FGF3 (ENSNNAG00000006555)	FGF4 (ENSNNAG00000006539)	FGF19 (ENSNNAG00000006529)	ENSNNAG00000006511	CCND1 (ENSNNAG00000006496)	TPCN2 (ENSNNAG00000006411)	NADSYN1 (ENSNNAG00000005666)
Elapidae_a	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100.n #18	ENSGT00390000018100.m #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199.e #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000153561.b.a.a.b.vc.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00940000166897	ENSGT00940000157816	ENSGT00940000159763	ENSGT00390000010152
Acanthophiinae	ANCESTRAL SPECIES	6	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100.n #18	ENSGT00390000018100.m #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199.e #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000153561.b.a.a.b.vc.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00940000166897	ENSGT00940000157816	ENSGT00940000159763	ENSGT00390000010152
Mainland tiger snake	MODERN SPECIES	9	COMMD9 (ENSNSUG00000008978)	LDLRAD3 (ENSNSUG00000008979) #7	FJX1 (ENSNSUG00000008980)	PAMR1 (ENSNSUG00000008981) #10	SLC1A2 (ENSNSUG00000008983) #11	CD44 (ENSNSUG00000009221) #13	PDHX (ENSNSUG00000009222) #14	APIP (ENSNSUG00000009235) #15	EHF (ENSNSUG00000009236) #16	ELF5 (ENSNSUG00000009237) #17	ENSNSUG00000009259 #18	ENSNSUG00000009263 #18	ABTB2 (ENSNSUG00000009269) #19	NAT10 (ENSNSUG00000009284) #20	CAPRIN1 (ENSNSUG00000009334) #21	ENSNSUG00000010250 #22	FBXO3 (ENSNSUG00000010252) #24	CD59 (ENSNSUG00000010255) #25	ENSNSUG00000010256	SHANK2 (ENSNSUG00000010257)	CTTN (ENSNSUG00000010306)	PPFIA1 (ENSNSUG00000010311)	FADD (ENSNSUG00000010978)	ANO1 (ENSNSUG00000010983)	FGF3 (ENSNSUG00000010990)	FGF4 (ENSNSUG00000010993)	FGF19 (ENSNSUG00000010998)	ENSNSUG00000011000	CCND1 (ENSNSUG00000011011)	NADSYN1 (ENSNSUG00000011018)	DHCR7 (ENSNSUG00000011199)
Eastern brown snake	MODERN SPECIES	1	COMMD9 (ENSPTXG00000008679)	LDLRAD3 (ENSPTXG00000008678) #7	FJX1 (ENSPTXG00000008677)	PAMR1 (ENSPTXG00000008676) #10	SLC1A2 (ENSPTXG00000008672) #11	CD44 (ENSPTXG00000008671) #13	PDHX (ENSPTXG00000008669) #14	APIP (ENSPTXG00000008668) #15	EHF (ENSPTXG00000008667) #16	ELF5 (ENSPTXG00000008666) #17	ENSPTXG00000007368 #18	ENSPTXG00000007359 #18	ABTB2 (ENSPTXG00000007354) #19	NAT10 (ENSPTXG00000007352) #20	CAPRIN1 (ENSPTXG00000007350) #21	LMO2 (ENSPTXG00000007349) #22	FBXO3 (ENSPTXG00000007348) #24	CD59 (ENSPTXG00000007347) #25	ENSPTXG00000007345	SHANK2 (ENSPTXG00000007344)	CTTN (ENSPTXG00000007342)	PPFIA1 (ENSPTXG00000007340)	FADD (ENSPTXG00000007337)	ENSPTXG00000007334	ANO1 (ENSPTXG00000004727)	FGF3 (ENSPTXG00000004717)	FGF4 (ENSPTXG00000004715)	FGF19 (ENSPTXG00000004714)	ENSPTXG00000004713	CCND1 (ENSPTXG00000004712)	TPCN2 (ENSPTXG00000004711)
Blue-lipped sea krait	MODERN SPECIES	5974																LMO2 (ENSLLTG00000005187) #22
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000160199.f #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000160199.f #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000160199.f #22
Mainland tiger snake	MODERN SPECIES	22	TMEM86A (ENSNSUG00000018086)	PTPN5 (ENSNSUG00000018080)	PTPRJ (ENSNSUG00000018065)	OSBPL5 (ENSNSUG00000018055)	PSMG1 (ENSNSUG00000018054)	CARS1 (ENSNSUG00000017473)	NAP1L4 (ENSNSUG00000017466)	ENSNSUG00000017462	ENSNSUG00000017461	SLC22A18 (ENSNSUG00000017460)	CDKN1C (ENSNSUG00000017459)	ENSNSUG00000017458	KCNQ1 (ENSNSUG00000017457)	TRPM5 (ENSNSUG00000017452)	TSSC4 (ENSNSUG00000017451)	ENSNSUG00000017450 #22	CD81 (ENSNSUG00000017449)	ENSNSUG00000017448	ASCL2 (ENSNSUG00000017447)	TH (ENSNSUG00000017446)	ENSNSUG00000017445	IGF2 (ENSNSUG00000017444)	ENSNSUG00000017443	TNNT3 (ENSNSUG00000017442)	ENSNSUG00000017441	ENSNSUG00000017440	TNNI2 (ENSNSUG00000017439)	SYT8 (ENSNSUG00000017438)	ENSNSUG00000017437	CTSD (ENSNSUG00000017436)	IFITM10 (ENSNSUG00000017435)
Lizard	MODERN SPECIES	897					APIP (ENSACAG00000013004) #15	ENSACAG00000045134	EHF (ENSACAG00000035457) #16	ELF5 (ENSACAG00000013095) #17	ENSACAG00000028247 #18	ENSACAG00000013118 #18	ENSACAG00000039301 #18	ENSACAG00000013184 #18	ABTB2 (ENSACAG00000013318) #19	NAT10 (ENSACAG00000013465) #20	CAPRIN1 (ENSACAG00000013621) #21	LMO2 (ENSACAG00000013783) #22	FBXO3 (ENSACAG00000013809) #24	CD59 (ENSACAG00000043957) #25	ENSACAG00000034585	ENSACAG00000013926	ENSACAG00000036981	ENSACAG00000013951	ENSACAG00000043315	SHANK2 (ENSACAG00000004060)	ENSACAG00000041931	CTTN (ENSACAG00000003923)	PPFIA1 (ENSACAG00000003711)	ENSACAG00000003577
Archelosauria	ANCESTRAL SPECIES	2	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Cryptodira	ANCESTRAL SPECIES	3	ENSGT00940000160574 #7	ENSGT00960000189471	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Testudinoidea	ANCESTRAL SPECIES	3	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361.l	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Testudinidae	ANCESTRAL SPECIES	2	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361.l	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Abingdon island giant tortoise	MODERN SPECIES	2774								PDHX (ENSCABG00000021834) #14	APIP (ENSCABG00000021833) #15	EHF (ENSCABG00000021830) #16	ELF5 (ENSCABG00000021829) #17	CAT (ENSCABG00000021828) #18	ABTB2 (ENSCABG00000021820) #19	NAT10 (ENSCABG00000021703) #20	CAPRIN1 (ENSCABG00000021681) #21	LMO2 (ENSCABG00000021679) #22	FBXO3 (ENSCABG00000021673) #24
Goode s thornscrub tortoise	MODERN SPECIES	18	COMMD9 (ENSGEVG00005015180)	LDLRAD3 (ENSGEVG00005015195) #7	TRIM44 (ENSGEVG00005015266) #9	FJX1 (ENSGEVG00005015321)	PAMR1 (ENSGEVG00005015366) #10	SLC1A2 (ENSGEVG00005015528) #11	CD44 (ENSGEVG00005015868) #13	PDHX (ENSGEVG00005015894) #14	APIP (ENSGEVG00005015935) #15	EHF (ENSGEVG00005015957) #16	ELF5 (ENSGEVG00005016024) #17	CAT (ENSGEVG00005016106) #18	ABTB2 (ENSGEVG00005016255) #19	NAT10 (ENSGEVG00005016611) #20	CAPRIN1 (ENSGEVG00005016756) #21	LMO2 (ENSGEVG00005017244) #22	FBXO3 (ENSGEVG00005017267) #24	CD59 (ENSGEVG00005017352) #25	ENSGEVG00005017369	ENSGEVG00005017411	ENSGEVG00005017454	ENSGEVG00005017488	CTTN (ENSGEVG00005017687)	PPFIA1 (ENSGEVG00005017733)	FADD (ENSGEVG00005017827)	ANO1 (ENSGEVG00005017866)	FGF3 (ENSGEVG00005018030)	FGF4 (ENSGEVG00005018058)	FGF19 (ENSGEVG00005018136)	LTO1 (ENSGEVG00005018185)	CCND1 (ENSGEVG00005018203)
Emydidae	ANCESTRAL SPECIES	2	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361.l	ENSGT00940000153561.b.a.a.b	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Three-toed box turtle	MODERN SPECIES	40	COMMD9 (ENSTMTG00000008903)	LDLRAD3 (ENSTMTG00000008894) #7	TRIM44 (ENSTMTG00000008878) #9	FJX1 (ENSTMTG00000008863)	PAMR1 (ENSTMTG00000008840) #10	SLC1A2 (ENSTMTG00000008810) #11	ENSTMTG00000008780 #13	PDHX (ENSTMTG00000008758) #14	APIP (ENSTMTG00000008745) #15	EHF (ENSTMTG00000008712) #16	ELF5 (ENSTMTG00000008674) #17	CAT (ENSTMTG00000008651) #18	ABTB2 (ENSTMTG00000008508) #19	NAT10 (ENSTMTG00000008472) #20	CAPRIN1 (ENSTMTG00000007967) #21	LMO2 (ENSTMTG00000007913) #22	FBXO3 (ENSTMTG00000007908) #24	ENSTMTG00000007897	CD59 (ENSTMTG00000007869) #25	ENSTMTG00000007815	ENSTMTG00000007801	ENSTMTG00000007782	SHANK2 (ENSTMTG00000007719)	CTTN (ENSTMTG00000007686)	PPFIA1 (ENSTMTG00000005454)	FADD (ENSTMTG00000005325)	ENSTMTG00000005318	ENSTMTG00000005270	FGF3 (ENSTMTG00000005246)	FGF4 (ENSTMTG00000005231)	FGF19 (ENSTMTG00000005212)
painted turtle	MODERN SPECIES	13	LDLRAD3 (ENSCPBG00000012541) #7	TRIM44 (ENSCPBG00000012540) #9	FJX1 (ENSCPBG00000012539)	PAMR1 (ENSCPBG00000012537) #10	SLC1A2 (ENSCPBG00000012534) #11	CD44 (ENSCPBG00000012532) #13	PDHX (ENSCPBG00000012531) #14	APIP (ENSCPBG00000012530) #15	EHF (ENSCPBG00000012529) #16	ELF5 (ENSCPBG00000012528) #17	CAT (ENSCPBG00000012526) #18	ENSCPBG00000012525 #19	ENSCPBG00000012523 #19	NAT10 (ENSCPBG00000012518) #20	CAPRIN1 (ENSCPBG00000012511) #21	LMO2 (ENSCPBG00000012505) #22	FBXO3 (ENSCPBG00000012502) #24	CD59 (ENSCPBG00000012499) #25	ENSCPBG00000012497	ENSCPBG00000012493	ENSCPBG00000012491	SHANK2 (ENSCPBG00000012482)	CTTN (ENSCPBG00000012477)	PPFIA1 (ENSCPBG00000012457)	FADD (ENSCPBG00000012452)	ANO1 (ENSCPBG00000011970)	FGF3 (ENSCPBG00000011841)	FGF4 (ENSCPBG00000011837)	FGF19 (ENSCPBG00000011830)	LTO1 (ENSCPBG00000011826)	CCND1 (ENSCPBG00000011823)
Chinese turtle	MODERN SPECIES	1365															CAPRIN1 (ENSPSIG00000007750) #21	LMO2 (ENSPSIG00000007568) #22	FBXO3 (ENSPSIG00000007269) #24	ENSPSIG00000007164 #25	ENSPSIG00000006888 #25	ENSPSIG00000005902	ENSPSIG00000005586	TENT4A (ENSPSIG00000015964)	SRD5A1 (ENSPSIG00000015950)	NSUN2 (ENSPSIG00000015282)	UBE2QL1 (ENSPSIG00000015214)	MED10 (ENSPSIG00000015211)	ENSPSIG00000000027	ENSPSIG00000014439	ENSPSIG00000008803
Archosauria	ANCESTRAL SPECIES	5	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00440000034605 #9	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Australian saltwater crocodile	MODERN SPECIES	64	COMMD9 (ENSCPRG00005011189)	LDLRAD3 (ENSCPRG00005011188) #7	TRIM44 (ENSCPRG00005011181) #9	PAMR1 (ENSCPRG00005011143) #10	SLC1A2 (ENSCPRG00005011036) #11	ENSCPRG00005011010 #13	ENSCPRG00005011008 #13	PDHX (ENSCPRG00005010991) #14	APIP (ENSCPRG00005010986) #15	EHF (ENSCPRG00005010982) #16	ELF5 (ENSCPRG00005010953) #17	CAT (ENSCPRG00005010950) #18	ABTB2 (ENSCPRG00005010800) #19	NAT10 (ENSCPRG00005010567) #20	CAPRIN1 (ENSCPRG00005009900) #21	LMO2 (ENSCPRG00005009849) #22	FBXO3 (ENSCPRG00005009845) #24	ENSCPRG00005009843 #25	ENSCPRG00005009826	ENSCPRG00005009819	ENSCPRG00005009814	SHANK2 (ENSCPRG00005009774)	CTTN (ENSCPRG00005009752)	PPFIA1 (ENSCPRG00005009708)	FADD (ENSCPRG00005009695)	ANO1 (ENSCPRG00005009663)	FGF3 (ENSCPRG00005009656)	FGF4 (ENSCPRG00005009636)	FGF19 (ENSCPRG00005009629)	ENSCPRG00005009620	CCND1 (ENSCPRG00005009618)
Aves	ANCESTRAL SPECIES	2	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
African ostrich	MODERN SPECIES	1069	PRR5L (ENSSCUG00000018806)	COMMD9 (ENSSCUG00000018804)	LDLRAD3 (ENSSCUG00000018802) #7	ENSSCUG00000018799	PAMR1 (ENSSCUG00000018797) #10	SLC1A2 (ENSSCUG00000018795) #11	CD44 (ENSSCUG00000018790) #13	PDHX (ENSSCUG00000018780) #14	APIP (ENSSCUG00000018778) #15	EHF (ENSSCUG00000018771) #16	ELF5 (ENSSCUG00000018767) #17	CAT (ENSSCUG00000018763) #18	ABTB2 (ENSSCUG00000018762) #19	NAT10 (ENSSCUG00000018760) #20	CAPRIN1 (ENSSCUG00000018759) #21	LMO2 (ENSSCUG00000018758) #22	FBXO3 (ENSSCUG00000018757) #24	CD59 (ENSSCUG00000018756) #25	ENSSCUG00000018752	ENSSCUG00000018751	SHANK2 (ENSSCUG00000018749)	CTTN (ENSSCUG00000018745)	PPFIA1 (ENSSCUG00000018736)	ENSSCUG00000018733	ANO1 (ENSSCUG00000018728)	FGF3 (ENSSCUG00000018722)	FGF4 (ENSSCUG00000018721)	LTO1 (ENSSCUG00000018719)	CCND1 (ENSSCUG00000018718)	TPCN2 (ENSSCUG00000018708)	NADSYN1 (ENSSCUG00000018705)
Neognathae	ANCESTRAL SPECIES	4	ENSGT00530000063981.b	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Galloanserae	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00960000189471	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Phasianidae	ANCESTRAL SPECIES	4	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00960000189471	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Japanese quail	MODERN SPECIES	23	KCNA4 (ENSCJPG00005015399)	COMMD9 (ENSCJPG00005015405)	LDLRAD3 (ENSCJPG00005015406) #7	FJX1 (ENSCJPG00005015411)	PAMR1 (ENSCJPG00005015412) #10	SLC1A2 (ENSCJPG00005015413) #11	CD44 (ENSCJPG00005015414) #13	PDHX (ENSCJPG00005015416) #14	APIP (ENSCJPG00005015417) #15	EHF (ENSCJPG00005015419) #16	ELF5 (ENSCJPG00005015420) #17	CAT (ENSCJPG00005015421) #18	ABTB2 (ENSCJPG00005015422) #19	NAT10 (ENSCJPG00005015492) #20	CAPRIN1 (ENSCJPG00005015577) #21	LMO2 (ENSCJPG00005015578) #22	FBXO3 (ENSCJPG00005015579) #24	CD59 (ENSCJPG00005015580) #25	ENSCJPG00005015582	ENSCJPG00005015583	SHANK2 (ENSCJPG00005015584)	CTTN (ENSCJPG00005016082)	PPFIA1 (ENSCJPG00005016091)	FADD (ENSCJPG00005016845)	ANO1 (ENSCJPG00005016846)	FGF3 (ENSCJPG00005017493)	FGF4 (ENSCJPG00005017494)	FGF19 (ENSCJPG00005017495)	ENSCJPG00005017496	CCND1 (ENSCJPG00005017497)	TPCN2 (ENSCJPG00005017503)
Phasianidae_b	ANCESTRAL SPECIES	3	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00960000189471	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Chicken	MODERN SPECIES	34	COMMD9 (ENSGALG00010025170)	LDLRAD3 (ENSGALG00010025163) #7	ENSGALG00010025143	FJX1 (ENSGALG00010026537)	PAMR1 (ENSGALG00010025127) #10	SLC1A2 (ENSGALG00010025067) #11	CD44 (ENSGALG00010024974) #13	APIP (ENSGALG00010024945) #15	PDHX (ENSGALG00010024941) #14	EHF (ENSGALG00010024936) #16	ELF5 (ENSGALG00010024926) #17	CAT (ENSGALG00010024911) #18	ABTB2 (ENSGALG00010024886) #19	NAT10 (ENSGALG00010024880) #20	CAPRIN1 (ENSGALG00010024855) #21	LMO2 (ENSGALG00010024846) #22	FBXO3 (ENSGALG00010024818) #24	CD59 (ENSGALG00010024802) #25	ENSGALG00010024799	ACTBL2 (ENSGALG00010024796)	SHANK2 (ENSGALG00010024791)	ENSGALG00010024777	CTTN (ENSGALG00010024767)	PPFIA1 (ENSGALG00010024757)	FADD (ENSGALG00010025338)	ANO1 (ENSGALG00010025538)	FGF3 (ENSGALG00010025487)	FGF4 (ENSGALG00010025483)	FGF19 (ENSGALG00010025480)	ORAOV1 (ENSGALG00010025470)	CCND1 (ENSGALG00010025419)
Turkey	MODERN SPECIES	25	TRAF6 (ENSMGAG00000010397)	PRR5L (ENSMGAG00000010386)	COMMD9 (ENSMGAG00000010379)	LDLRAD3 (ENSMGAG00000010377) #7	PAMR1 (ENSMGAG00000010360) #10	SLC1A2 (ENSMGAG00000010336) #11	CD44 (ENSMGAG00000010318) #13	PDHX (ENSMGAG00000010298) #14	APIP (ENSMGAG00000010290) #15	EHF (ENSMGAG00000010275) #16	ELF5 (ENSMGAG00000010265) #17	CAT (ENSMGAG00000010242) #18	ABTB2 (ENSMGAG00000010227) #19	NAT10 (ENSMGAG00000010206) #20	CAPRIN1 (ENSMGAG00000010122) #21	LMO2 (ENSMGAG00000010192) #22	FBXO3 (ENSMGAG00000010146) #24	CD59 (ENSMGAG00000010188) #25	ENSMGAG00000010176	ENSMGAG00000010159	ENSMGAG00000019805	ENSMGAG00000010111	ENSMGAG00000010103	ENSMGAG00000021040	CTTN (ENSMGAG00000010050)	PPFIA1 (ENSMGAG00000009999)	FADD (ENSMGAG00000009995)	ANO1 (ENSMGAG00000009938)	FGF4 (ENSMGAG00000009926)	FGF19 (ENSMGAG00000009924)	LTO1 (ENSMGAG00000009922)
Anatidae	ANCESTRAL SPECIES	50	ENSGT00390000006218	ENSGT00940000160574 #7	ENSGT00960000189471	ENSGT00390000016768	ENSGT00940000154234.a #10	ENSGT00940000155379 #11	ENSGT00530000063822.a.a #13	ENSGT00940000156046 #14	ENSGT00390000001680 #15	ENSGT00940000159310 #16	ENSGT00940000160980 #17	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Duck	MODERN SPECIES	23	COMMD9 (ENSAPLG00000021527)	LDLRAD3 (ENSAPLG00000013350) #7	ENSAPLG00000029093	FJX1 (ENSAPLG00000019807)	PAMR1 (ENSAPLG00000012925) #10	SLC1A2 (ENSAPLG00000012571) #11	CD44 (ENSAPLG00000012207) #13	PDHX (ENSAPLG00000011686) #14	APIP (ENSAPLG00000011642) #15	EHF (ENSAPLG00000011349) #16	ELF5 (ENSAPLG00000011073) #17	CAT (ENSAPLG00000010432) #18	ABTB2 (ENSAPLG00000008248) #19	NAT10 (ENSAPLG00000007638) #20	CAPRIN1 (ENSAPLG00000006975) #21	LMO2 (ENSAPLG00000006962) #22	FBXO3 (ENSAPLG00000006774) #24	CD59 (ENSAPLG00000025499) #25	ENSAPLG00000020680	ENSAPLG00000006513	ENSAPLG00000027417	ENSAPLG00000006385	ENSAPLG00000028380	CTTN (ENSAPLG00000005914)	PPFIA1 (ENSAPLG00000005058)	FADD (ENSAPLG00000005051)	ANO1 (ENSAPLG00000004437)	FGF3 (ENSAPLG00000004435)	FGF4 (ENSAPLG00000022440)	FGF19 (ENSAPLG00000004286)	LTO1 (ENSAPLG00000004024)
Pink-footed goose	MODERN SPECIES	39	COMMD9 (ENSABRG00000017756)	LDLRAD3 (ENSABRG00000017763) #7	ENSABRG00000017769	FJX1 (ENSABRG00000017771)	PAMR1 (ENSABRG00000017780) #10	SLC1A2 (ENSABRG00000017782) #11	CD44 (ENSABRG00000017785) #13	PDHX (ENSABRG00000017796) #14	APIP (ENSABRG00000017800) #15	EHF (ENSABRG00000017802) #16	ELF5 (ENSABRG00000017804) #17	CAT (ENSABRG00000017805) #18	ABTB2 (ENSABRG00000017808) #19	NAT10 (ENSABRG00000017812) #20	CAPRIN1 (ENSABRG00000017817) #21	LMO2 (ENSABRG00000017822) #22	FBXO3 (ENSABRG00000017824) #24	CD59 (ENSABRG00000017825) #25	ENSABRG00000017826	ENSABRG00000017827	SHANK2 (ENSABRG00000017831)	ENSABRG00000017832	CTTN (ENSABRG00000017864)	PPFIA1 (ENSABRG00000018499)	FADD (ENSABRG00000019800)	ANO1 (ENSABRG00000019808)	FGF3 (ENSABRG00000019857)	ENSABRG00000019858	FGF19 (ENSABRG00000019861)	LTO1 (ENSABRG00000019863)	CCND1 (ENSABRG00000019865)
Neognathae_b	ANCESTRAL SPECIES	14	ENSGT01030000234639.A.b.d.b	ENSGT00940000163951.c.b	ENSGT00940000163951.d	ENSGT01100000263572.a.a.a.b	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b	ENSGT00950000182990.a.a.b.a.a	ENSGT00950000182990.a.a.b.a.b.b.a.b.b	ENSGT00950000182990.a.a.b.a.b.b.a.a	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Passeriformes	ANCESTRAL SPECIES	25	ENSGT01030000234639.A.b.d.a	ENSGT01030000234639.A.b.d.b	ENSGT00940000163951.c.b	ENSGT00940000163951.d	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b	ENSGT00950000182990.a.a.b.a.a	ENSGT00950000182990.a.a.b.a.b.b.a.b.b	ENSGT00950000182990.a.a.b.a.b.b.a.a	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Passeriformes_d	ANCESTRAL SPECIES	24	ENSGT01030000234639.A.b.d.a	ENSGT01030000234639.A.b.d.b	ENSGT00940000163951.c.b	ENSGT00940000163951.d	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b	ENSGT00950000182990.a.a.b.a.a	ENSGT00950000182990.a.a.b.a.b.b.a.b.b	ENSGT00950000182990.a.a.b.a.b.b.a.a	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565.b	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Passeriformes_g	ANCESTRAL SPECIES		ENSGT00940000163057	ENSGT01060000248581.C.a.a.x	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b	ENSGT00950000182990.a.a.b.a.a	ENSGT00950000182990.a.a.b.a.b.b.a.b.b	ENSGT00950000182990.a.a.b.a.b.b.a.a	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT01100000263499.a.b	ENSGT01100000263499.a.a.d	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565.b	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Medium ground finch	MODERN SPECIES	105	OR4D5 (ENSGFOG00000010832)	ENSGFOG00000010839	ENSGFOG00000004591	ENSGFOG00000004782	RAB3IL1 (ENSGFOG00000004792)	ENSGFOG00000004808	ENSGFOG00000004847	ENSGFOG00000004956	ENSGFOG00000005008	CAT (ENSGFOG00000005045) #18	ABTB2 (ENSGFOG00000005158) #19	ENSGFOG00000005175	ENSGFOG00000005233	NAT10 (ENSGFOG00000005455) #20	CAPRIN1 (ENSGFOG00000008899) #21	LMO2 (ENSGFOG00000009039) #22	FBXO3 (ENSGFOG00000009052) #24	CD59 (ENSGFOG00000009059) #25	ENSGFOG00000009069	ENSGFOG00000009079	CTTN (ENSGFOG00000009092)	PPFIA1 (ENSGFOG00000009159)	FADD (ENSGFOG00000009959)	ANO1 (ENSGFOG00000009973)	FGF3 (ENSGFOG00000009991)	FGF4 (ENSGFOG00000009997)	FGF19 (ENSGFOG00000010004)	LTO1 (ENSGFOG00000010010)	CCND1 (ENSGFOG00000010018)	TPCN2 (ENSGFOG00000010031)	NADSYN1 (ENSGFOG00000010073)
Passeroidea	ANCESTRAL SPECIES	1	ENSGT00940000163951.d	ENSGT01060000248581.C.a.a.x	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b	ENSGT00950000182990.a.a.b.a.a	ENSGT00950000182990.a.a.b.a.b.b.a.b.b	ENSGT00950000182990.a.a.b.a.b.b.a.a	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT01100000263499.a.b	ENSGT01100000263499.a.a.d	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565.b	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816	ENSGT00940000159763
Zebra finch	MODERN SPECIES	27	ENSTGUG00000019788	ENSTGUG00000023798	ENSTGUG00000019494	ENSTGUG00000005975	ENSTGUG00000005971	ENSTGUG00000005970	BEST1 (ENSTGUG00000005934)	ENSTGUG00000005863	FTH1 (ENSTGUG00000005913)	ENSTGUG00000005777	ENSTGUG00000005781	CAT (ENSTGUG00000005716) #18	ABTB2 (ENSTGUG00000005690) #19	NAT10 (ENSTGUG00000005638) #20	CAPRIN1 (ENSTGUG00000024587) #21	LMO2 (ENSTGUG00000005633) #22	FBXO3 (ENSTGUG00000005600) #24	ENSTGUG00000025115	ENSTGUG00000028508	SHANK2 (ENSTGUG00000005571)	ENSTGUG00000028814	CTTN (ENSTGUG00000005520)	PPFIA1 (ENSTGUG00000005461)	FADD (ENSTGUG00000029237)	ANO1 (ENSTGUG00000005385)	FGF3 (ENSTGUG00000005379)	FGF4 (ENSTGUG00000019156)	FGF19 (ENSTGUG00000019746)	LTO1 (ENSTGUG00000024666)	CCND1 (ENSTGUG00000005350)	TPCN2 (ENSTGUG00000005328)
Common canary	MODERN SPECIES	45	ENSSCAG00000009274	ENSSCAG00000009250	ENSSCAG00000009241	BEST1 (ENSSCAG00000009230)	RAB3IL1 (ENSSCAG00000009218)	ENSSCAG00000009211	ENSSCAG00000009206	ENSSCAG00000009191	ENSSCAG00000009180	CAT (ENSSCAG00000008992) #18	ABTB2 (ENSSCAG00000008945) #19	ENSSCAG00000008926	ENSSCAG00000008910	NAT10 (ENSSCAG00000008894) #20	CAPRIN1 (ENSSCAG00000008500) #21	LMO2 (ENSSCAG00000008456) #22	FBXO3 (ENSSCAG00000008450) #24	CD59 (ENSSCAG00000008444) #25	ENSSCAG00000008438	SHANK2 (ENSSCAG00000008391)	ENSSCAG00000008366	CTTN (ENSSCAG00000008353)	PPFIA1 (ENSSCAG00000008327)	FADD (ENSSCAG00000008309)	ANO1 (ENSSCAG00000008269)	FGF19 (ENSSCAG00000008256)	LTO1 (ENSSCAG00000008248)	ENSSCAG00000008240	TPCN2 (ENSSCAG00000008186)	NADSYN1 (ENSSCAG00000008149)	DHCR7 (ENSSCAG00000008143)
Flycatcher	MODERN SPECIES	24	CSRP3 (ENSFALG00000001621)	E2F8 (ENSFALG00000001625)	NAV2 (ENSFALG00000001640)	DBX1 (ENSFALG00000001676)	PRMT3 (ENSFALG00000001682)	SLC6A5 (ENSFALG00000001694)	NELL1 (ENSFALG00000001705)	ANO5 (ENSFALG00000001707)	ENSFALG00000027442	SLC17A6 (ENSFALG00000004750)	FANCF (ENSFALG00000004784)	GAS2 (ENSFALG00000004792)	LUZP2 (ENSFALG00000001067)	NAT10 (ENSFALG00000001264) #20	CAPRIN1 (ENSFALG00000001291) #21	LMO2 (ENSFALG00000001311) #22	FBXO3 (ENSFALG00000001317) #24	ENSFALG00000024507	ENSFALG00000001347	CTTN (ENSFALG00000001357)	PPFIA1 (ENSFALG00000001366)	FADD (ENSFALG00000026128)	ANO1 (ENSFALG00000001374)	FGF3 (ENSFALG00000001385)	FGF4 (ENSFALG00000023034)	FGF19 (ENSFALG00000028132)	LTO1 (ENSFALG00000027380)	CCND1 (ENSFALG00000001395)	TPCN2 (ENSFALG00000008794)	ENSFALG00000008807	DHCR7 (ENSFALG00000027432)
Great tit	MODERN SPECIES	25	ENSPMJG00000007035	ENSPMJG00000007036	ENSPMJG00000007039	ENSPMJG00000007040	ENSPMJG00000007041	ENSPMJG00000007051	ENSPMJG00000007074	BEST1 (ENSPMJG00000007078)	RAB3IL1 (ENSPMJG00000007085)	ENSPMJG00000007101	ENSPMJG00000007108	ENSPMJG00000007116	ENSPMJG00000007129	CAT (ENSPMJG00000007491) #18	ABTB2 (ENSPMJG00000007492) #19	LMO2 (ENSPMJG00000007493) #22	NAT10 (ENSPMJG00000007494) #20	CAPRIN1 (ENSPMJG00000007495) #21	FBXO3 (ENSPMJG00000007496) #24	CD59 (ENSPMJG00000007514) #25	ENSPMJG00000007515	SHANK2 (ENSPMJG00000007558)	ENSPMJG00000007566	CTTN (ENSPMJG00000007574)	PPFIA1 (ENSPMJG00000007603)	FADD (ENSPMJG00000007639)	ANO1 (ENSPMJG00000007664)	FGF3 (ENSPMJG00000007681)	FGF4 (ENSPMJG00000007684)	FGF19 (ENSPMJG00000007686)	LTO1 (ENSPMJG00000007687)
Neognathae_c	ANCESTRAL SPECIES	17	ENSGT01030000234639.A.b.c.e.b	ENSGT01030000234639.A.b.d.b	ENSGT00940000163951.c.b	ENSGT01100000263572.a.a.a.b	ENSGT00950000182841.b.a.a.b.b	ENSGT00940000158650	ENSGT00940000159102	ENSGT00950000182990.a.a.a.b	ENSGT00950000182990.a.a.b.a.a	ENSGT00950000182990.a.a.b.a.b.b.a.b.b	ENSGT00950000182990.a.a.b.a.b.b.a.a	ENSGT00390000018100 #18	ENSGT00940000157661 #19	ENSGT00390000009140 #20	ENSGT00940000153438.a #21	ENSGT00940000160199 #22	ENSGT00940000153571.b #24	ENSGT00390000016309 #25	ENSGT00730000111007.a.b	ENSGT00940000164361	ENSGT00940000153561.b.a.a.b	ENSGT01030000235608	ENSGT00940000158565	ENSGT01050000244900.a.a.b	ENSGT00390000002105	ENSGT00940000157182	ENSGT00940000161128	ENSGT00940000158825	ENSGT00940000160601	ENSGT00390000009426	ENSGT00940000157816
Golden eagle	MODERN SPECIES	7	OR4Q3 (ENSACCG00020014865)	ENSACCG00020014849	ENSACCG00020014837	OR5AS1 (ENSACCG00020014826)	ENSACCG00020014819	BEST1 (ENSACCG00020014803)	RAB3IL1 (ENSACCG00020014765)	ENSACCG00020014722	ENSACCG00020014699	ENSACCG00020014685	ENSACCG00020014661	CAT (ENSACCG00020014645) #18	ABTB2 (ENSACCG00020014514) #19	NAT10 (ENSACCG00020014378) #20	CAPRIN1 (ENSACCG00020014330) #21	LMO2 (ENSACCG00020014289) #22	FBXO3 (ENSACCG00020014282) #24	CD59 (ENSACCG00020014266) #25	ENSACCG00020014239	ENSACCG00020014203	ENSACCG00020014182	ENSACCG00020014112	ENSACCG00020014090	CTTN (ENSACCG00020014072)	PPFIA1 (ENSACCG00020013987)	FADD (ENSACCG00020013886)	ANO1 (ENSACCG00020013843)	FGF3 (ENSACCG00020013742)	FGF4 (ENSACCG00020013725)	FGF19 (ENSACCG00020013709)	LTO1 (ENSACCG00020013692)
Kakapo	MODERN SPECIES	21	ENSSHBG00005019015	ENSSHBG00005019019	ENSSHBG00005019021	ENSSHBG00005019024	BEST1 (ENSSHBG00005019030)	RAB3IL1 (ENSSHBG00005019035)	ENSSHBG00005019041	ENSSHBG00005000136	ENSSHBG00005001435	ENSSHBG00005001592	ENSSHBG00005001696	CAT (ENSSHBG00005001730) #18	ENSSHBG00005001787 #19	NAT10 (ENSSHBG00005001821) #20	CAPRIN1 (ENSSHBG00005001881) #21	LMO2 (ENSSHBG00005001910) #22	FBXO3 (ENSSHBG00005001938) #24	CD59 (ENSSHBG00005001975) #25	ENSSHBG00005001998	ENSSHBG00005002043	SHANK2 (ENSSHBG00005002111)	ENSSHBG00005002163	CTTN (ENSSHBG00005002184)	PPFIA1 (ENSSHBG00005002212)	FADD (ENSSHBG00005002226)	API5 (ENSSHBG00005002238)	TTC17 (ENSSHBG00005002263)	HSD17B12 (ENSSHBG00005002298)	ALKBH3 (ENSSHBG00005002317)	C11orf96 (ENSSHBG00005002329)	ENSSHBG00005002340