Gnathostomata	ANCESTRAL SPECIES	574												ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT00950000183202.b #23
Euteleostomi	ANCESTRAL SPECIES	432											ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT01100000263536.A.b	ENSGT00950000183202.b #23
Sarcopterygii	ANCESTRAL SPECIES	11	ENSGT00940000162114	ENSGT00390000011439	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT01040000240539	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173288	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Tetrapoda	ANCESTRAL SPECIES		ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT01040000240539	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Amniota	ANCESTRAL SPECIES		ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT01040000240539	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT01030000235083
Mammalia	ANCESTRAL SPECIES		ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173288	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT01030000235083
Theria	ANCESTRAL SPECIES	1	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173288	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT01030000235083
Eutheria	ANCESTRAL SPECIES	17	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT01030000235083	ENSGT00940000165996
Boreoeutheria	ANCESTRAL SPECIES	21	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Euarchontoglires	ANCESTRAL SPECIES	21	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Primates	ANCESTRAL SPECIES	26	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Strepsirrhini	ANCESTRAL SPECIES	27	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Lemuriformes	ANCESTRAL SPECIES	18	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00730000110966 #30	ENSGT00390000010017 #31	ENSGT00940000161558 #32	ENSGT00490000043976 #33	ENSGT00390000013518 #34	ENSGT00990000203589.a.b.a.a #35	ENSGT00390000008657 #36	ENSGT00730000111188 #37
Lemuriformes_a	ANCESTRAL SPECIES	41	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00730000110966 #30	ENSGT00390000010017 #31	ENSGT00940000161558 #32	ENSGT00490000043976 #33	ENSGT00390000013518 #34	ENSGT00990000203589.a.b.a.a #35	ENSGT00390000008657 #36	ENSGT00730000111188 #37
Greater bamboo lemur	MODERN SPECIES	716	KCNRG (ENSPSMG00000016450) #7	TRIM13 (ENSPSMG00000016458) #8	SPRYD7 (ENSPSMG00000016482) #9	KPNA3 (ENSPSMG00000016546) #10	EBPL (ENSPSMG00000016569) #11	ARL11 (ENSPSMG00000016576) #12	RCBTB1 (ENSPSMG00000016600) #13	PHF11 (ENSPSMG00000016617) #14	SETDB2 (ENSPSMG00000016698) #15	CAB39L (ENSPSMG00000016717) #16	ENSPSMG00000016725 #17	CDADC1 (ENSPSMG00000016735) #18	MLNR (ENSPSMG00000016738) #19	FNDC3A (ENSPSMG00000016962) #20	ENSPSMG00000017007 #21	RCBTB2 (ENSPSMG00000017070) #22	RB1 (ENSPSMG00000017129) #23	LPAR6 (ENSPSMG00000017152) #24	ITM2B (ENSPSMG00000017177) #25	MED4 (ENSPSMG00000017195) #26	NUDT15 (ENSPSMG00000017202) #27	SUCLA2 (ENSPSMG00000017268) #28	HTR2A (ENSPSMG00000017318) #29	SLC25A15 (ENSPSMG00000017332) #30	MRPS31 (ENSPSMG00000017347) #31	FOXO1 (ENSPSMG00000017352) #32	ENSPSMG00000017359 #33	COG6 (ENSPSMG00000017419) #34	LHFPL6 (ENSPSMG00000017460) #35	NHLRC3 (ENSPSMG00000017507) #36	PROSER1 (ENSPSMG00000017566) #37
Coquerels sifaka	MODERN SPECIES	87	C13orf42 (ENSPCOG00000021956)	ENSPCOG00000027037	RNASEH2B (ENSPCOG00000026623)	DLEU7 (ENSPCOG00000026956)	KCNRG (ENSPCOG00000018995) #7	SPRYD7 (ENSPCOG00000014473) #9	KPNA3 (ENSPCOG00000018104) #10	EBPL (ENSPCOG00000017361) #11	RCBTB1 (ENSPCOG00000023593) #13	PHF11 (ENSPCOG00000025902) #14	SETDB2 (ENSPCOG00000017644) #15	CAB39L (ENSPCOG00000022177) #16	CDADC1 (ENSPCOG00000010000) #18	MLNR (ENSPCOG00000024564) #19	FNDC3A (ENSPCOG00000016565) #20	RCBTB2 (ENSPCOG00000021825) #22	RB1 (ENSPCOG00000017056) #23	ITM2B (ENSPCOG00000018351) #25	NUDT15 (ENSPCOG00000014340) #27	SUCLA2 (ENSPCOG00000018242) #28
Mouse lemur	MODERN SPECIES	4	ENSMICG00000008092	RNASEH2B (ENSMICG00000000528)	DLEU7 (ENSMICG00000031262)	KCNRG (ENSMICG00000042205) #7	SPRYD7 (ENSMICG00000012835) #9	KPNA3 (ENSMICG00000006647) #10	EBPL (ENSMICG00000006640) #11	ARL11 (ENSMICG00000006637) #12	RCBTB1 (ENSMICG00000006630) #13	PHF11 (ENSMICG00000006622) #14	SETDB2 (ENSMICG00000012641) #15	CAB39L (ENSMICG00000017528) #16	CDADC1 (ENSMICG00000017527) #18	MLNR (ENSMICG00000045079) #19	FNDC3A (ENSMICG00000009814) #20	RCBTB2 (ENSMICG00000001761) #22	RB1 (ENSMICG00000001747) #23	ITM2B (ENSMICG00000001759) #25	MED4 (ENSMICG00000009590) #26	NUDT15 (ENSMICG00000042635) #27	SUCLA2 (ENSMICG00000009577) #28	HTR2A (ENSMICG00000043800) #29	SLC25A15 (ENSMICG00000007218) #30	MRPS31 (ENSMICG00000006449) #31	FOXO1 (ENSMICG00000028457) #32	COG6 (ENSMICG00000001598) #34	LHFPL6 (ENSMICG00000001594) #35	NHLRC3 (ENSMICG00000010249) #36	PROSER1 (ENSMICG00000010238) #37	STOML3 (ENSMICG00000003204)	FREM2 (ENSMICG00000003191)
Bushbaby	MODERN SPECIES	221	ATP12A (ENSOGAG00000003804)	RNF17 (ENSOGAG00000014803)	CENPJ (ENSOGAG00000014821)	PARP4 (ENSOGAG00000016230)	MPHOSPH8 (ENSOGAG00000012635)	PSPC1 (ENSOGAG00000012643)	ENSOGAG00000032663	ENSOGAG00000024065	ENSOGAG00000034482	ZMYM2 (ENSOGAG00000015350)	GJA3 (ENSOGAG00000015365)	GJB2 (ENSOGAG00000011675)	GJB6 (ENSOGAG00000005343)	ENSOGAG00000030885	CRYL1 (ENSOGAG00000016250)	RCBTB2 (ENSOGAG00000007469) #22	LPAR6 (ENSOGAG00000007467) #24	RB1 (ENSOGAG00000007461) #23	ENSOGAG00000033501	ITM2B (ENSOGAG00000007459) #25	MED4 (ENSOGAG00000007456) #26	NUDT15 (ENSOGAG00000024482) #27	SUCLA2 (ENSOGAG00000007452) #28	ENSOGAG00000030653	ENSOGAG00000029408
Haplorrhini	ANCESTRAL SPECIES	28	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Simiiformes	ANCESTRAL SPECIES	22	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00860000135722	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.c #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00860000135722	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.m #27	ENSGT00390000010170.a.b.c.e #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864.m.a	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Cebidae	ANCESTRAL SPECIES	26	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00860000135722	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.m #27	ENSGT00390000010170.a.b.c.e #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864.m.a	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Cebidae_a	ANCESTRAL SPECIES	28	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00860000135722	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.m #27	ENSGT00390000010170.a.b.c.e #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864.m.a	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Capuchin	MODERN SPECIES	94	RNASEH2B (ENSCCAG00000026979)	DLEU7 (ENSCCAG00000033394)	KCNRG (ENSCCAG00000033873) #7	TRIM13 (ENSCCAG00000021391) #8	SPRYD7 (ENSCCAG00000035704) #9	KPNA3 (ENSCCAG00000034651) #10	EBPL (ENSCCAG00000028820) #11	ENSCCAG00000034833	RCBTB1 (ENSCCAG00000024661) #13	PHF11 (ENSCCAG00000020321) #14	SETDB2 (ENSCCAG00000031604) #15	CAB39L (ENSCCAG00000027201) #16	CDADC1 (ENSCCAG00000037595) #18	MLNR (ENSCCAG00000012939) #19	FNDC3A (ENSCCAG00000022083) #20	RCBTB2 (ENSCCAG00000029598) #22	RB1 (ENSCCAG00000019226) #23	LPAR6 (ENSCCAG00000014413) #24	ITM2B (ENSCCAG00000025031) #25	MED4 (ENSCCAG00000037625) #26	NUDT15 (ENSCCAG00000034630) #27	SUCLA2 (ENSCCAG00000036078) #28	ENSCCAG00000027774	HTR2A (ENSCCAG00000020537) #29	ENSCCAG00000025918	LRCH1 (ENSCCAG00000036225)	RUBCNL (ENSCCAG00000023570)	LRRC63 (ENSCCAG00000024800)	LCP1 (ENSCCAG00000023585)	CPB2 (ENSCCAG00000030272)	ZC3H13 (ENSCCAG00000032728)
Bolivian squirrel monkey	MODERN SPECIES	198	KCNRG (ENSSBOG00000023070) #7	TRIM13 (ENSSBOG00000020064) #8	SPRYD7 (ENSSBOG00000031956) #9	ENSSBOG00000030646	KPNA3 (ENSSBOG00000030689) #10	EBPL (ENSSBOG00000028545) #11	RCBTB1 (ENSSBOG00000017490) #13	PHF11 (ENSSBOG00000034363) #14	SETDB2 (ENSSBOG00000023249) #15	CAB39L (ENSSBOG00000027469) #16	CDADC1 (ENSSBOG00000025762) #18	MLNR (ENSSBOG00000035313) #19	FNDC3A (ENSSBOG00000026737) #20	CYSLTR2 (ENSSBOG00000025475)	ENSSBOG00000019051	RCBTB2 (ENSSBOG00000026825) #22	LPAR6 (ENSSBOG00000036320) #24	ENSSBOG00000026221	RB1 (ENSSBOG00000027893) #23	ITM2B (ENSSBOG00000018913) #25	MED4 (ENSSBOG00000024066) #26	NUDT15 (ENSSBOG00000020573) #27	ENSSBOG00000029965 #28	ENSSBOG00000030465	ENSSBOG00000026010	ENSSBOG00000033017	HTR2A (ENSSBOG00000030657) #29	ESD (ENSSBOG00000023081)	ENSSBOG00000023599	LRCH1 (ENSSBOG00000035307)
Marmoset	MODERN SPECIES		ENSCJAG00000076737	ENSCJAG00000073191	SPRYD7 (ENSCJAG00000007818) #9	ENSCJAG00000044787 #10	EBPL (ENSCJAG00000008764) #11	ARL11 (ENSCJAG00000022614) #12	RCBTB1 (ENSCJAG00000008772) #13	SETDB2 (ENSCJAG00000008864) #15	ENSCJAG00000080953	CAB39L (ENSCJAG00000047061) #16	CDADC1 (ENSCJAG00000008925) #18	MLNR (ENSCJAG00000071397) #19	FNDC3A (ENSCJAG00000008978) #20	ENSCJAG00000059197	ENSCJAG00000075551 #21	RCBTB2 (ENSCJAG00000009006) #22	RB1 (ENSCJAG00000009076) #23	LPAR6 (ENSCJAG00000060429) #24	ENSCJAG00000074787	ITM2B (ENSCJAG00000073561) #25	ENSCJAG00000009256 #26	ENSCJAG00000040641	NUDT15 (ENSCJAG00000043795) #27	ENSCJAG00000009278 #28	HTR2A (ENSCJAG00000060527) #29	ENSCJAG00000077810	ENSCJAG00000009380	LRCH1 (ENSCJAG00000009392)	ENSCJAG00000086315	ENSCJAG00000009449	ENSCJAG00000079784
Mas night monkey	MODERN SPECIES	902										CAB39L (ENSANAG00000024473) #16	CDADC1 (ENSANAG00000024556) #18	MLNR (ENSANAG00000037292) #19	FNDC3A (ENSANAG00000029046) #20	CYSLTR2 (ENSANAG00000024658)	ENSANAG00000013536	RCBTB2 (ENSANAG00000023045) #22	ENSANAG00000031593	RB1 (ENSANAG00000022056) #23	LPAR6 (ENSANAG00000016578) #24	ENSANAG00000011241	ITM2B (ENSANAG00000029180) #25	ENSANAG00000026714 #26	ENSANAG00000027167	NUDT15 (ENSANAG00000023666) #27	ENSANAG00000025311 #28	ENSANAG00000028654	ENSANAG00000029501	HTR2A (ENSANAG00000032310) #29	ENSANAG00000033549	LRCH1 (ENSANAG00000032605)	ENSANAG00000021038
Catarrhini	ANCESTRAL SPECIES	21	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.c #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00450000040303.d	ENSGT00710000106860	ENSGT00950000183097.a.a.b
Hominoidea	ANCESTRAL SPECIES	21	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b.f	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.c #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00450000040303.d	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Hominidae	ANCESTRAL SPECIES	23	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b.f	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.c #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	23	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b.e	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b.a.a #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00390000018086.n.a.b.b	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.c.c #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00410000028359	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Homo/Pan group	ANCESTRAL SPECIES	22	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b.a.a #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00390000018086.n.a.b.b	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.c.c #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00410000028359	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Pan	ANCESTRAL SPECIES	22	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.a.d	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b.a.a #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00390000018086.n.a.b.b	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.c.c #28	ENSGT00940000154415.x.b	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00910000146855.i.b	ENSGT00390000004757.`b.b.a.b	ENSGT00940000160585
Bonobo	MODERN SPECIES	4	SPRYD7 (ENSPPAG00000039609) #9	ENSPPAG00000039069	KPNA3 (ENSPPAG00000033827) #10	ENSPPAG00000042659 #11	ARL11 (ENSPPAG00000033238) #12	RCBTB1 (ENSPPAG00000032068) #13	PHF11 (ENSPPAG00000030056) #14	SETDB2 (ENSPPAG00000039854) #15	CAB39L (ENSPPAG00000029104) #16	CDADC1 (ENSPPAG00000028450) #18	MLNR (ENSPPAG00000027956) #19	ENSPPAG00000032803	FNDC3A (ENSPPAG00000032461) #20	CYSLTR2 (ENSPPAG00000003898)	ENSPPAG00000029505	RCBTB2 (ENSPPAG00000038976) #22	LPAR6 (ENSPPAG00000006621) #24	ENSPPAG00000030030	RB1 (ENSPPAG00000002165) #23	ENSPPAG00000040476 #25	MED4 (ENSPPAG00000038697) #26	NUDT15 (ENSPPAG00000037539) #27	SUCLA2 (ENSPPAG00000037438) #28	ENSPPAG00000039901	ENSPPAG00000035492	HTR2A (ENSPPAG00000000160) #29	ESD (ENSPPAG00000029798)	LRCH1 (ENSPPAG00000041174)	ENSPPAG00000036752	ENSPPAG00000027262	VWA8 (ENSPPAG00000004808)
Chimpanzee	MODERN SPECIES	4	SPRYD7 (ENSPTRG00000005879) #9	ENSPTRG00000051804	KPNA3 (ENSPTRG00000005878) #10	EBPL (ENSPTRG00000005877) #11	ARL11 (ENSPTRG00000005876) #12	RCBTB1 (ENSPTRG00000005875) #13	PHF11 (ENSPTRG00000005874) #14	SETDB2 (ENSPTRG00000005873) #15	CAB39L (ENSPTRG00000005872) #16	CDADC1 (ENSPTRG00000005871) #18	MLNR (ENSPTRG00000045556) #19	ENSPTRG00000051644	FNDC3A (ENSPTRG00000023284) #20	CYSLTR2 (ENSPTRG00000045872)	ENSPTRG00000045034	RCBTB2 (ENSPTRG00000005866) #22	LPAR6 (ENSPTRG00000005865) #24	RB1 (ENSPTRG00000005864) #23	ITM2B (ENSPTRG00000005863) #25	MED4 (ENSPTRG00000005861) #26	ENSPTRG00000042329 #27	SUCLA2 (ENSPTRG00000005859) #28	ENSPTRG00000040949	ENSPTRG00000044084	HTR2A (ENSPTRG00000005858) #29	ESD (ENSPTRG00000005857)	LRCH1 (ENSPTRG00000005856)	ENSPTRG00000052632	ENSPTRG00000046675	ENSPTRG00000046351	RUBCNL (ENSPTRG00000005855)
Human	MODERN SPECIES	4	DLEU7 (ENSG00000186047)	KCNRG (ENSG00000198553) #7	TRIM13 (ENSG00000204977) #8	SPRYD7 (ENSG00000123178) #9	KPNA3 (ENSG00000102753) #10	EBPL (ENSG00000123179) #11	ARL11 (ENSG00000152213) #12	RCBTB1 (ENSG00000136144) #13	PHF11 (ENSG00000136147) #14	SETDB2 (ENSG00000136169) #15	CAB39L (ENSG00000102547) #16	CDADC1 (ENSG00000102543) #18	MLNR (ENSG00000102539) #19	FNDC3A (ENSG00000102531) #20	CYSLTR2 (ENSG00000152207)	RCBTB2 (ENSG00000136161) #22	LPAR6 (ENSG00000139679) #24	RB1 (ENSG00000139687) #23	ITM2B (ENSG00000136156) #25	MED4 (ENSG00000136146) #26	NUDT15 (ENSG00000136159) #27	SUCLA2 (ENSG00000136143) #28	HTR2A (ENSG00000102468) #29	ESD (ENSG00000139684)	LRCH1 (ENSG00000136141)	RUBCNL (ENSG00000102445)	LRRC63 (ENSG00000173988)	LCP1 (ENSG00000136167)	CPB2 (ENSG00000080618)	ZC3H13 (ENSG00000123200)	SIAH3 (ENSG00000215475)
Gorilla	MODERN SPECIES	4	SPRYD7 (ENSGGOG00000005611) #9	ENSGGOG00000038396	KPNA3 (ENSGGOG00000037674) #10	EBPL (ENSGGOG00000023967) #11	ARL11 (ENSGGOG00000004442) #12	RCBTB1 (ENSGGOG00000007787) #13	PHF11 (ENSGGOG00000014624) #14	SETDB2 (ENSGGOG00000016016) #15	CAB39L (ENSGGOG00000000576) #16	CDADC1 (ENSGGOG00000005192) #18	MLNR (ENSGGOG00000003817) #19	ENSGGOG00000042037	FNDC3A (ENSGGOG00000005701) #20	CYSLTR2 (ENSGGOG00000040254)	ENSGGOG00000043311	RCBTB2 (ENSGGOG00000004291) #22	LPAR6 (ENSGGOG00000015398) #24	ENSGGOG00000025744	RB1 (ENSGGOG00000016440) #23	ITM2B (ENSGGOG00000006744) #25	MED4 (ENSGGOG00000014132) #26	NUDT15 (ENSGGOG00000008232) #27	SUCLA2 (ENSGGOG00000008224) #28	ENSGGOG00000040252	HTR2A (ENSGGOG00000038568) #29	ESD (ENSGGOG00000041798)	LRCH1 (ENSGGOG00000006833)	ENSGGOG00000040281	RUBCNL (ENSGGOG00000010430)	ENSGGOG00000042457	LRRC63 (ENSGGOG00000004589)
Orangutan	MODERN SPECIES	4	SPRYD7 (ENSPPYG00000032002) #9	ENSPPYG00000031527	ENSPPYG00000039366	KPNA3 (ENSPPYG00000005372) #10	EBPL (ENSPPYG00000032916) #11	ARL11 (ENSPPYG00000031330) #12	RCBTB1 (ENSPPYG00000005370) #13	PHF11 (ENSPPYG00000005369) #14	SETDB2 (ENSPPYG00000005368) #15	CAB39L (ENSPPYG00000005366) #16	CDADC1 (ENSPPYG00000005365) #18	MLNR (ENSPPYG00000005364) #19	ENSPPYG00000037999	FNDC3A (ENSPPYG00000005363) #20	CYSLTR2 (ENSPPYG00000005362)	RCBTB2 (ENSPPYG00000005361) #22	RB1 (ENSPPYG00000005357) #23	ITM2B (ENSPPYG00000005356) #25	NUDT15 (ENSPPYG00000005353) #27	MED4 (ENSPPYG00000005354) #26	SUCLA2 (ENSPPYG00000005352) #28	HTR2A (ENSPPYG00000005351) #29	ESD (ENSPPYG00000029594)	LRCH1 (ENSPPYG00000005349)	ENSPPYG00000035548	RUBCNL (ENSPPYG00000005348)	LRRC63 (ENSPPYG00000005347)	LCP1 (ENSPPYG00000005346)	CPB2 (ENSPPYG00000005345)	ZC3H13 (ENSPPYG00000005344)	SIAH3 (ENSPPYG00000040754)
Gibbon	MODERN SPECIES	20	ENSNLEG00000031661	ENSNLEG00000003786 #7	TRIM13 (ENSNLEG00000033521) #8	SPRYD7 (ENSNLEG00000003774) #9	KPNA3 (ENSNLEG00000003711) #10	EBPL (ENSNLEG00000030148) #11	ARL11 (ENSNLEG00000031734) #12	RCBTB1 (ENSNLEG00000003661) #13	PHF11 (ENSNLEG00000003639) #14	SETDB2 (ENSNLEG00000003613) #15	CAB39L (ENSNLEG00000003584) #16	CDADC1 (ENSNLEG00000003574) #18	MLNR (ENSNLEG00000003571) #19	ENSNLEG00000033908	FNDC3A (ENSNLEG00000003383) #20	RCBTB2 (ENSNLEG00000003314) #22	LPAR6 (ENSNLEG00000032872) #24	ENSNLEG00000029413	RB1 (ENSNLEG00000003150) #23	ITM2B (ENSNLEG00000032591) #25	MED4 (ENSNLEG00000002961) #26	NUDT15 (ENSNLEG00000031040) #27	SUCLA2 (ENSNLEG00000002948) #28	ENSNLEG00000034996	HTR2A (ENSNLEG00000002930) #29	ESD (ENSNLEG00000002862)	LRCH1 (ENSNLEG00000002812)	RUBCNL (ENSNLEG00000002722)	ENSNLEG00000027697	LRRC63 (ENSNLEG00000002719)	LCP1 (ENSNLEG00000002616)
Cercopithecidae	ANCESTRAL SPECIES	23	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.i.b #27	ENSGT00390000010170.a.b.c.a #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864.o.a	ENSGT00940000159528	ENSGT00940000160585	ENSGT00450000040303.d	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Rhinopithecus	ANCESTRAL SPECIES	165	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b.a	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00390000014577.a.k.b	ENSGT00940000153676.b #18	ENSGT00390000008978.q.a.b	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.i.b #27	ENSGT00390000010170.a.b.c.a #28	ENSGT00940000161696.c.b
Black snub-nosed monkey	MODERN SPECIES	464	TRIM13 (ENSRBIG00000035646) #8	SPRYD7 (ENSRBIG00000028326) #9	ENSRBIG00000023911	KPNA3 (ENSRBIG00000043478) #10	EBPL (ENSRBIG00000043563) #11	ARL11 (ENSRBIG00000024949) #12	RCBTB1 (ENSRBIG00000034157) #13	PHF11 (ENSRBIG00000028151) #14	SETDB2 (ENSRBIG00000006562) #15	CAB39L (ENSRBIG00000031272) #16	ENSRBIG00000004387	CDADC1 (ENSRBIG00000004767) #18	ENSRBIG00000033894	MLNR (ENSRBIG00000043617) #19	FNDC3A (ENSRBIG00000034032) #20	RCBTB2 (ENSRBIG00000028201) #22	RB1 (ENSRBIG00000033901) #23	LPAR6 (ENSRBIG00000029799) #24	ENSRBIG00000029549	ITM2B (ENSRBIG00000030686) #25	MED4 (ENSRBIG00000037170) #26	ENSRBIG00000030175 #27	SUCLA2 (ENSRBIG00000033328) #28	ENSRBIG00000036056
Golden snub-nosed monkey	MODERN SPECIES	1111	SPRYD7 (ENSRROG00000045600) #9	ENSRROG00000035429	KPNA3 (ENSRROG00000040985) #10	EBPL (ENSRROG00000045110) #11	ARL11 (ENSRROG00000000591) #12	RCBTB1 (ENSRROG00000037694) #13	PHF11 (ENSRROG00000039790) #14	SETDB2 (ENSRROG00000032499) #15	CAB39L (ENSRROG00000012193) #16	ENSRROG00000037477	CDADC1 (ENSRROG00000032374) #18	ENSRROG00000032981	MLNR (ENSRROG00000044972) #19	FNDC3A (ENSRROG00000035387) #20	CYSLTR2 (ENSRROG00000031421)	RCBTB2 (ENSRROG00000035536) #22	RB1 (ENSRROG00000035485) #23	LPAR6 (ENSRROG00000014042) #24	ENSRROG00000039915	ITM2B (ENSRROG00000044024) #25	MED4 (ENSRROG00000024064) #26	ENSRROG00000003860 #27	ENSRROG00000017591 #28
Cercopithecinae	ANCESTRAL SPECIES	20	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.i.b #27	ENSGT00390000010170.a.b.c.a #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864.o.a	ENSGT00940000159528	ENSGT00940000160585	ENSGT00450000040303.d	ENSGT00710000106860	ENSGT00950000183097.a.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	19	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000014577.a.k.b	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.i.b #27	ENSGT00390000010170.a.b.c.a #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864.o.a	ENSGT00940000159528	ENSGT00940000160585	ENSGT00450000040303.d	ENSGT00710000106860	ENSGT00950000183097.a.a.b
Macaca	ANCESTRAL SPECIES	19	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000014577.a.k.b	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01030000237919	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00390000010218.f.a.b.a.a	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.i.b #27	ENSGT00390000010170.a.b.c.a #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.p	ENSGT00940000159528	ENSGT00940000160585	ENSGT00450000040303.d	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00910000147882
Macaca_a	ANCESTRAL SPECIES	19	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01030000237919	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.i.b #27	ENSGT00390000010170.a.b.c.a #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.p	ENSGT00940000159528	ENSGT00940000160585	ENSGT00450000040303.d	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000153137.a.b.b.a
Rhesus	MODERN SPECIES	8	EBPL (ENSMMUG00000020571) #11	ARL11 (ENSMMUG00000011766) #12	RCBTB1 (ENSMMUG00000021029) #13	PHF11 (ENSMMUG00000013476) #14	SETDB2 (ENSMMUG00000013473) #15	CAB39L (ENSMMUG00000013472) #16	CDADC1 (ENSMMUG00000013470) #18	MLNR (ENSMMUG00000056827) #19	ENSMMUG00000052690	ENSMMUG00000063566	FNDC3A (ENSMMUG00000023756) #20	ENSMMUG00000059939	ENSMMUG00000062735	ENSMMUG00000063973	CYSLTR2 (ENSMMUG00000063377)	RCBTB2 (ENSMMUG00000017688) #22	RB1 (ENSMMUG00000007891) #23	ITM2B (ENSMMUG00000007888) #25	MED4 (ENSMMUG00000017988) #26	NUDT15 (ENSMMUG00000056464) #27	SUCLA2 (ENSMMUG00000007539) #28	ENSMMUG00000059778	ENSMMUG00000065094	HTR2A (ENSMMUG00000004210) #29	ESD (ENSMMUG00000004209)	LRCH1 (ENSMMUG00000016293)	RUBCNL (ENSMMUG00000009862)	ENSMMUG00000060668	LRRC63 (ENSMMUG00000009860)	LCP1 (ENSMMUG00000017033)	ZC3H13 (ENSMMUG00000017025)
Crab-eating macaque	MODERN SPECIES	8	KPNA3 (ENSMFAG00000043025) #10	ENSMFAG00000042629 #11	ARL11 (ENSMFAG00000051612) #12	RCBTB1 (ENSMFAG00000045129) #13	PHF11 (ENSMFAG00000044828) #14	SETDB2 (ENSMFAG00000032631) #15	CAB39L (ENSMFAG00000031142) #16	CDADC1 (ENSMFAG00000032976) #18	ENSMFAG00000028078	ENSMFAG00000033530	ENSMFAG00000064862	ENSMFAG00000049454	FNDC3A (ENSMFAG00000032790) #20	CYSLTR2 (ENSMFAG00000055024)	ENSMFAG00000059363	RCBTB2 (ENSMFAG00000042366) #22	ENSMFAG00000064054	ENSMFAG00000059645	RB1 (ENSMFAG00000004544) #23	ITM2B (ENSMFAG00000036817) #25	MED4 (ENSMFAG00000036744) #26	NUDT15 (ENSMFAG00000042118) #27	SUCLA2 (ENSMFAG00000043471) #28	HTR2A (ENSMFAG00000060544) #29	ESD (ENSMFAG00000035557)	LRCH1 (ENSMFAG00000032767)	RUBCNL (ENSMFAG00000030648)	ENSMFAG00000037947	LRRC63 (ENSMFAG00000033245)	LCP1 (ENSMFAG00000036326)	ENSMFAG00000040145
Pig-tailed macaque	MODERN SPECIES	171	SPRYD7 (ENSMNEG00000029382) #9	ENSMNEG00000040611	KPNA3 (ENSMNEG00000040002) #10	EBPL (ENSMNEG00000030512) #11	RCBTB1 (ENSMNEG00000031917) #13	PHF11 (ENSMNEG00000033252) #14	SETDB2 (ENSMNEG00000037148) #15	ENSMNEG00000041626	CAB39L (ENSMNEG00000045272) #16	CDADC1 (ENSMNEG00000018746) #18	MLNR (ENSMNEG00000043576) #19	ENSMNEG00000029704	FNDC3A (ENSMNEG00000038484) #20	CYSLTR2 (ENSMNEG00000044194)	ENSMNEG00000012494	RCBTB2 (ENSMNEG00000045246) #22	LPAR6 (ENSMNEG00000000292) #24	ENSMNEG00000034410	RB1 (ENSMNEG00000030265) #23	ITM2B (ENSMNEG00000036643) #25	MED4 (ENSMNEG00000040390) #26	ENSMNEG00000041226 #27	ENSMNEG00000006210 #28	HTR2A (ENSMNEG00000020560) #29	ENSMNEG00000034915	LRCH1 (ENSMNEG00000041283)	RUBCNL (ENSMNEG00000043317)	ENSMNEG00000043141	LRRC63 (ENSMNEG00000031014)	LCP1 (ENSMNEG00000042226)	ENSMNEG00000004142
Cercopithecinae_b	ANCESTRAL SPECIES	28	ENSGT00390000011048 #9	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000014577.a.k.b	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.i.b #27	ENSGT00390000010170.a.b.c.a #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864.o.a	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00450000040303.d	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Olive baboon	MODERN SPECIES	6	SPRYD7 (ENSPANG00000010055) #9	ENSPANG00000012862	ENSPANG00000049978	ENSPANG00000042729	KPNA3 (ENSPANG00000012863) #10	EBPL (ENSPANG00000016575) #11	ARL11 (ENSPANG00000006280) #12	RCBTB1 (ENSPANG00000013866) #13	PHF11 (ENSPANG00000009973) #14	SETDB2 (ENSPANG00000017051) #15	CAB39L (ENSPANG00000046091) #16	CDADC1 (ENSPANG00000017052) #18	MLNR (ENSPANG00000005882) #19	FNDC3A (ENSPANG00000006006) #20	CYSLTR2 (ENSPANG00000010610)	RCBTB2 (ENSPANG00000017177) #22	LPAR6 (ENSPANG00000010821) #24	RB1 (ENSPANG00000007572) #23	ITM2B (ENSPANG00000010611) #25	ENSPANG00000050365	MED4 (ENSPANG00000017223) #26	NUDT15 (ENSPANG00000018183) #27	SUCLA2 (ENSPANG00000002938) #28	ENSPANG00000050620	HTR2A (ENSPANG00000022427) #29	ENSPANG00000010192	LRCH1 (ENSPANG00000006286)	RUBCNL (ENSPANG00000012223)	LRRC63 (ENSPANG00000012865)	LCP1 (ENSPANG00000008557)	CPB2 (ENSPANG00000009473)
Cercopithecinae_d	ANCESTRAL SPECIES	54	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000014577.a.k.b	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00390000002349.f	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00910000146906	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.i.b #27	ENSGT00390000010170.a.b.c.a #28	ENSGT00940000161696.c.b	ENSGT01050000244937.a.a #29	ENSGT00390000011864.o.a	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00450000040303.d	ENSGT00950000183097.a.a.b	ENSGT00940000159160
Sooty mangabey	MODERN SPECIES	125	SPRYD7 (ENSCATG00000039787) #9	ENSCATG00000017588	KPNA3 (ENSCATG00000035335) #10	ENSCATG00000033973	ARL11 (ENSCATG00000011750) #12	RCBTB1 (ENSCATG00000042520) #13	PHF11 (ENSCATG00000035264) #14	SETDB2 (ENSCATG00000002055) #15	CAB39L (ENSCATG00000040811) #16	ENSCATG00000029394	CDADC1 (ENSCATG00000033587) #18	MLNR (ENSCATG00000007804) #19	ENSCATG00000007919	FNDC3A (ENSCATG00000044050) #20	CYSLTR2 (ENSCATG00000008094)	RCBTB2 (ENSCATG00000033627) #22	ENSCATG00000006797	RB1 (ENSCATG00000018582) #23	LPAR6 (ENSCATG00000014982) #24	ITM2B (ENSCATG00000030426) #25	MED4 (ENSCATG00000040995) #26	ENSCATG00000009200 #27	ENSCATG00000040280 #28	ENSCATG00000044105	HTR2A (ENSCATG00000037177) #29	ENSCATG00000040583	LRCH1 (ENSCATG00000018159)	RUBCNL (ENSCATG00000033291)	LRRC63 (ENSCATG00000039942)	ENSCATG00000040154	LCP1 (ENSCATG00000040724)
Drill	MODERN SPECIES	1279														ENSMLEG00000030783	FNDC3A (ENSMLEG00000032489) #20	RCBTB2 (ENSMLEG00000034431) #22	ENSMLEG00000025221	RB1 (ENSMLEG00000035121) #23	LPAR6 (ENSMLEG00000026652) #24	ITM2B (ENSMLEG00000028049) #25	ENSMLEG00000028339 #27	ENSMLEG00000029259 #28	ENSMLEG00000034000
Vervet Monkey	DUPLICATION
Vervet Monkey	MODERN SPECIES	22	TRIM13 (ENSCSAG00000018614) #8	SPRYD7 (ENSCSAG00000017704) #9	KPNA3 (ENSCSAG00000017707) #10	EBPL (ENSCSAG00000017708) #11	ARL11 (ENSCSAG00000018612) #12	RCBTB1 (ENSCSAG00000017709) #13	PHF11 (ENSCSAG00000017710) #14	SETDB2 (ENSCSAG00000017713) #15	ENSCSAG00000017715	CAB39L (ENSCSAG00000017717) #16	CDADC1 (ENSCSAG00000017720) #18	ENSCSAG00000017722	MLNR (ENSCSAG00000017724) #19	FNDC3A (ENSCSAG00000017734) #20	CYSLTR2 (ENSCSAG00000018610)	RCBTB2 (ENSCSAG00000017736) #22	LPAR6 (ENSCSAG00000018609) #24	RB1 (ENSCSAG00000017738) #23	ITM2B (ENSCSAG00000017740) #25	MED4 (ENSCSAG00000017743) #26	NUDT15 (ENSCSAG00000017745) #27	SUCLA2 (ENSCSAG00000017747) #28	HTR2A (ENSCSAG00000017748) #29	ESD (ENSCSAG00000017750)	LRCH1 (ENSCSAG00000017752)	RUBCNL (ENSCSAG00000017755)	LRRC63 (ENSCSAG00000017757)	LCP1 (ENSCSAG00000017761)	CPB2 (ENSCSAG00000017762)	ZC3H13 (ENSCSAG00000017764)	SIAH3 (ENSCSAG00000017765)
Vervet Monkey	MODERN SPECIES	28	HTR7 (ENSCSAG00000006705)	KIF20B (ENSCSAG00000006740)	PANK1 (ENSCSAG00000006763)	SLC16A12 (ENSCSAG00000006767)	IFIT5 (ENSCSAG00000006768)	IFIT1 (ENSCSAG00000006770)	IFIT1B (ENSCSAG00000018440)	IFIT3 (ENSCSAG00000006774)	IFIT2 (ENSCSAG00000006776)	LIPA (ENSCSAG00000006783)	CH25H (ENSCSAG00000018439)	ACTA2 (ENSCSAG00000006787)	STAMBPL1 (ENSCSAG00000006795)	ANKRD22 (ENSCSAG00000006799)	LIPM (ENSCSAG00000006821)	ENSCSAG00000006847 #22	LIPN (ENSCSAG00000006856)	LIPK (ENSCSAG00000006868)	LIPF (ENSCSAG00000006905)	LIPJ (ENSCSAG00000006921)	ENSCSAG00000006927	PTEN (ENSCSAG00000006930)	PAPSS2 (ENSCSAG00000006937)	ENSCSAG00000006942	MINPP1 (ENSCSAG00000006960)	ENSCSAG00000018438	SGMS1 (ENSCSAG00000006972)	ENSCSAG00000007014	A1CF (ENSCSAG00000007032)	CSTF2T (ENSCSAG00000018437)	PRKG1 (ENSCSAG00000007038)
Tarsier	MODERN SPECIES	4159																RCBTB2 (ENSTSYG00000007199) #22	RB1 (ENSTSYG00000001562) #23	ENSTSYG00000036565	ITM2B (ENSTSYG00000001560) #25	MED4 (ENSTSYG00000035248) #26	NUDT15 (ENSTSYG00000006960) #27	SUCLA2 (ENSTSYG00000008301) #28
Euarchontoglires_A	ANCESTRAL SPECIES	21	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Glires	ANCESTRAL SPECIES	22	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Rodentia	ANCESTRAL SPECIES	22	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Rodentia_B	ANCESTRAL SPECIES	25	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Myomorpha	ANCESTRAL SPECIES	32	ENSGT01100000263886	ENSGT01030000234513.B.b.j	ENSGT01030000235001	ENSGT01030000234513.B.b.i	ENSGT01050000244864.B.b	ENSGT00940000157028	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000159259.b	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Muroidea	ANCESTRAL SPECIES	25	ENSGT01100000263886	ENSGT01030000234513.B.b.j	ENSGT01030000235001	ENSGT01030000234513.B.b.i	ENSGT01050000244864.B.b	ENSGT00940000157028	ENSGT00940000162379	ENSGT00940000157358	ENSGT00730000111087	ENSGT00940000160555	ENSGT00530000063927.a.b	ENSGT00940000157559	ENSGT00940000159259.b	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Chinese hamster chok1gshd	MODERN SPECIES	3	Sftpc (ENSCGRG00001016044)	Lgi3 (ENSCGRG00001018802)	Reep4 (ENSCGRG00001006811)	Hr (ENSCGRG00001014790)	Nudt18 (ENSCGRG00001004686)	Fhip2b (ENSCGRG00001011801)	Dmtn (ENSCGRG00001022357)	Fgf17 (ENSCGRG00001022053)	Npm2 (ENSCGRG00001002208)	Xpo7 (ENSCGRG00001005783)	Dok2 (ENSCGRG00001020098)	Gfra2 (ENSCGRG00001022337)	Gm9195 (ENSCGRG00001003097)	Fndc3a (ENSCGRG00001020347) #20	ENSCGRG00001010401	Rcbtb2 (ENSCGRG00001016446) #22	Rb1 (ENSCGRG00001022172) #23	Lpar6 (ENSCGRG00001011474) #24	Itm2b (ENSCGRG00001015807) #25	Med4 (ENSCGRG00001018208) #26	Nudt15 (ENSCGRG00001001521) #27	SUCLA2 (ENSCGRG00001009190) #28	HTR2A (ENSCGRG00001000307) #29	ENSCGRG00001015731	Lrch1 (ENSCGRG00001021051)	Rubcnl (ENSCGRG00001015225)	Lrrc63 (ENSCGRG00001021365)	Lcp1 (ENSCGRG00001021099)	Cpb2 (ENSCGRG00001000100)	Zc3h13 (ENSCGRG00001014490)	Siah3 (ENSCGRG00001022985)
Golden Hamster	MODERN SPECIES	642	Sftpc (ENSMAUG00000013512)	Lgi3 (ENSMAUG00000003562)	Reep4 (ENSMAUG00000008766)	Hr (ENSMAUG00000018799)	Nudt18 (ENSMAUG00000010693)	Fhip2b (ENSMAUG00000019012)	Dmtn (ENSMAUG00000007804)	Fgf17 (ENSMAUG00000014970)	Npm2 (ENSMAUG00000004228)	Xpo7 (ENSMAUG00000000727)	Dok2 (ENSMAUG00000020434)	Gfra2 (ENSMAUG00000003686)	Gm9195 (ENSMAUG00000017114)	Fndc3a (ENSMAUG00000011429) #20	ENSMAUG00000008735	Rcbtb2 (ENSMAUG00000013502) #22	Lpar6 (ENSMAUG00000006841) #24	Rb1 (ENSMAUG00000020865) #23	Itm2b (ENSMAUG00000017281) #25	Med4 (ENSMAUG00000021269) #26	Nudt15 (ENSMAUG00000018405) #27	Sucla2 (ENSMAUG00000008374) #28	Htr2a (ENSMAUG00000011880) #29	Esd (ENSMAUG00000021229)	Lrch1 (ENSMAUG00000001816)	Lrrc63 (ENSMAUG00000017212)	ENSMAUG00000017813	Cpb2 (ENSMAUG00000011270)	ENSMAUG00000005243	Siah3 (ENSMAUG00000016684)	Cby2 (ENSMAUG00000021027)
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	22	Sftpc (ENSPEMG00000022130)	Lgi3 (ENSPEMG00000021332)	Reep4 (ENSPEMG00000023573)	Hr (ENSPEMG00000016906)	Nudt18 (ENSPEMG00000014423)	Fhip2b (ENSPEMG00000022531)	Dmtn (ENSPEMG00000010274)	Fgf17 (ENSPEMG00000030845)	Npm2 (ENSPEMG00000013368)	Xpo7 (ENSPEMG00000007759)	Dok2 (ENSPEMG00000023202)	Gfra2 (ENSPEMG00000009994)	Gm9195 (ENSPEMG00000008194)	Fndc3a (ENSPEMG00000021668) #20	ENSPEMG00000031384	ENSPEMG00000006635 #22	Rb1 (ENSPEMG00000020245) #23	Lpar6 (ENSPEMG00000012942) #24	ENSPEMG00000029678	Itm2b (ENSPEMG00000020178) #25	Med4 (ENSPEMG00000000371) #26	Nudt15 (ENSPEMG00000013922) #27	Sucla2 (ENSPEMG00000020269) #28	ENSPEMG00000024389	Htr2a (ENSPEMG00000019339) #29	Esd (ENSPEMG00000019972)	Lrch1 (ENSPEMG00000019644)	Rubcnl (ENSPEMG00000008281)	Lrrc63 (ENSPEMG00000020509)	Lcp1 (ENSPEMG00000009810)	Cpb2 (ENSPEMG00000021086)
Northern American deer mouse	MODERN SPECIES	99															ENSPEMG00000026435	ENSPEMG00000017333 #22
Prairie vole	MODERN SPECIES	4	Sftpc (ENSMOCG00000010064)	Lgi3 (ENSMOCG00000021903)	Reep4 (ENSMOCG00000022325)	Hr (ENSMOCG00000000216)	Nudt18 (ENSMOCG00000007739)	Fhip2b (ENSMOCG00000008531)	Dmtn (ENSMOCG00000021436)	Fgf17 (ENSMOCG00000016452)	Npm2 (ENSMOCG00000017251)	Xpo7 (ENSMOCG00000002336)	Dok2 (ENSMOCG00000019946)	Gfra2 (ENSMOCG00000014649)	Gm9195 (ENSMOCG00000022806)	Fndc3a (ENSMOCG00000018330) #20	ENSMOCG00000007313	Rcbtb2 (ENSMOCG00000018787) #22	Rb1 (ENSMOCG00000010218) #23	Lpar6 (ENSMOCG00000007205) #24	Itm2b (ENSMOCG00000021655) #25	Med4 (ENSMOCG00000002608) #26	Nudt15 (ENSMOCG00000003875) #27	ENSMOCG00000011477 #28	Htr2a (ENSMOCG00000012645) #29	ENSMOCG00000016070	Lrch1 (ENSMOCG00000017560)	Rubcnl (ENSMOCG00000003331)	Lrrc63 (ENSMOCG00000018528)	Lcp1 (ENSMOCG00000010746)	Cpb2 (ENSMOCG00000006393)	ENSMOCG00000001346	Siah3 (ENSMOCG00000009347)
Murinae	ANCESTRAL SPECIES	16	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Mus	ANCESTRAL SPECIES	8	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Mus_A	ANCESTRAL SPECIES	12	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Mus_B	ANCESTRAL SPECIES	11	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.db	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Mouse	MODERN SPECIES	5	Sftpc (ENSMUSG00000022097)	Lgi3 (ENSMUSG00000033595)	Reep4 (ENSMUSG00000033589)	Hr (ENSMUSG00000022096)	Nudt18 (ENSMUSG00000045211)	Fhip2b (ENSMUSG00000022095)	Dmtn (ENSMUSG00000022099)	Fgf17 (ENSMUSG00000022101)	Npm2 (ENSMUSG00000047911)	Xpo7 (ENSMUSG00000022100)	Dok2 (ENSMUSG00000022102)	Gfra2 (ENSMUSG00000022103)	Gm9195 (ENSMUSG00000109446)	Fndc3a (ENSMUSG00000033487) #20	Cysltr2 (ENSMUSG00000033470) #21	Rcbtb2 (ENSMUSG00000022106) #22	Rb1 (ENSMUSG00000022105) #23	Lpar6 (ENSMUSG00000033446) #24	Itm2b (ENSMUSG00000022108) #25	Med4 (ENSMUSG00000022109) #26	Nudt15 (ENSMUSG00000033405) #27	Sucla2 (ENSMUSG00000022110) #28	Htr2a (ENSMUSG00000034997) #29	Esd (ENSMUSG00000021996)	Lrch1 (ENSMUSG00000068015)	Rubcnl (ENSMUSG00000034959)	Lrrc63 (ENSMUSG00000021997)	Lcp1 (ENSMUSG00000021998)	Cpb2 (ENSMUSG00000021999)	Zc3h13 (ENSMUSG00000022000)	Siah3 (ENSMUSG00000091722)
Mus_C	ANCESTRAL SPECIES	20	ENSGT00390000017162	ENSGT00940000160296	ENSGT00940000161674	ENSGT00940000161687	ENSGT00390000002931	ENSGT00950000182936.a.b.b	ENSGT00950000182850.a.b.b	ENSGT00940000161965	ENSGT00940000161418	ENSGT00940000153139.B.a	ENSGT00940000159868	ENSGT00940000156168.B	ENSGT00740000115687	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.db	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
spretus	MODERN SPECIES	5	Lgi3 (MGP_SPRETEiJ_G0020377)	Reep4 (MGP_SPRETEiJ_G0020378)	Hr (MGP_SPRETEiJ_G0020379)	Nudt18 (MGP_SPRETEiJ_G0020380)	Fhip2b (MGP_SPRETEiJ_G0020381)	Dmtn (MGP_SPRETEiJ_G0020382)	Fgf17 (MGP_SPRETEiJ_G0020383)	Npm2 (MGP_SPRETEiJ_G0020384)	Xpo7 (MGP_SPRETEiJ_G0020385)	Dok2 (MGP_SPRETEiJ_G0020386)	Gfra2 (MGP_SPRETEiJ_G0020387)	Fndc3a (MGP_SPRETEiJ_G0020388) #20	MGP_SPRETEiJ_G0020389	MGP_SPRETEiJ_G0020390	Cysltr2 (MGP_SPRETEiJ_G0020391) #21	Rcbtb2 (MGP_SPRETEiJ_G0020392) #22	Rb1 (MGP_SPRETEiJ_G0020393) #23	Lpar6 (MGP_SPRETEiJ_G0020394) #24	Itm2b (MGP_SPRETEiJ_G0020395) #25	Med4 (MGP_SPRETEiJ_G0020396) #26	MGP_SPRETEiJ_G0020397 #27	MGP_SPRETEiJ_G0020398 #27	Sucla2 (MGP_SPRETEiJ_G0020399) #28	Htr2a (MGP_SPRETEiJ_G0020400) #29	Esd (MGP_SPRETEiJ_G0020401)	Lrch1 (MGP_SPRETEiJ_G0020402)	Rubcnl (MGP_SPRETEiJ_G0020403)	Lrrc63 (MGP_SPRETEiJ_G0020404)	Lcp1 (MGP_SPRETEiJ_G0020405)	Cpb2 (MGP_SPRETEiJ_G0020406)	Zc3h13 (MGP_SPRETEiJ_G0020407)
Steppe mouse	MODERN SPECIES	1888																Rcbtb2 (ENSMSIG00000007053) #22	Rb1 (ENSMSIG00000007265) #23	Lpar6 (ENSMSIG00000007337) #24
Ryukyu mouse	MODERN SPECIES	5	Bmp1 (MGP_CAROLIEiJ_G0019483)	Sftpc (MGP_CAROLIEiJ_G0019484)	Lgi3 (MGP_CAROLIEiJ_G0019485)	Reep4 (MGP_CAROLIEiJ_G0019486)	Hr (MGP_CAROLIEiJ_G0019487)	Nudt18 (MGP_CAROLIEiJ_G0019488)	Fhip2b (MGP_CAROLIEiJ_G0019489)	Dmtn (MGP_CAROLIEiJ_G0019490)	Fgf17 (MGP_CAROLIEiJ_G0019491)	Npm2 (MGP_CAROLIEiJ_G0019492)	Xpo7 (MGP_CAROLIEiJ_G0019493)	Dok2 (MGP_CAROLIEiJ_G0019494)	Gfra2 (MGP_CAROLIEiJ_G0019495)	Fndc3a (MGP_CAROLIEiJ_G0019496) #20	Cysltr2 (MGP_CAROLIEiJ_G0019497) #21	Rcbtb2 (MGP_CAROLIEiJ_G0019498) #22	Rb1 (MGP_CAROLIEiJ_G0019499) #23	Lpar6 (MGP_CAROLIEiJ_G0019500) #24	Itm2b (MGP_CAROLIEiJ_G0019501) #25	Med4 (MGP_CAROLIEiJ_G0019502) #26	Nudt15 (MGP_CAROLIEiJ_G0019503) #27	Sucla2 (MGP_CAROLIEiJ_G0019504) #28	Htr2a (MGP_CAROLIEiJ_G0019505) #29	Esd (MGP_CAROLIEiJ_G0019506)	Lrch1 (MGP_CAROLIEiJ_G0019507)	Rubcnl (MGP_CAROLIEiJ_G0019508)	Lrrc63 (MGP_CAROLIEiJ_G0019509)	Lcp1 (MGP_CAROLIEiJ_G0019510)	Cpb2 (MGP_CAROLIEiJ_G0019511)	Zc3h13 (MGP_CAROLIEiJ_G0019512)	Siah3 (MGP_CAROLIEiJ_G0019513)
Shrew mouse	MODERN SPECIES	21	Bmp1 (MGP_PahariEiJ_G0030500)	Sftpc (MGP_PahariEiJ_G0030501)	Lgi3 (MGP_PahariEiJ_G0030502)	Reep4 (MGP_PahariEiJ_G0030503)	Hr (MGP_PahariEiJ_G0030504)	Nudt18 (MGP_PahariEiJ_G0030505)	Fhip2b (MGP_PahariEiJ_G0030506)	Dmtn (MGP_PahariEiJ_G0030507)	Fgf17 (MGP_PahariEiJ_G0030508)	Npm2 (MGP_PahariEiJ_G0030509)	Xpo7 (MGP_PahariEiJ_G0030510)	Dok2 (MGP_PahariEiJ_G0030511)	Gfra2 (MGP_PahariEiJ_G0030512)	Fndc3a (MGP_PahariEiJ_G0030513) #20	Cysltr2 (MGP_PahariEiJ_G0030514) #21	Rcbtb2 (MGP_PahariEiJ_G0030515) #22	Rb1 (MGP_PahariEiJ_G0030516) #23	Lpar6 (MGP_PahariEiJ_G0030517) #24	Itm2b (MGP_PahariEiJ_G0030518) #25	Med4 (MGP_PahariEiJ_G0030519) #26	MGP_PahariEiJ_G0030520 #27	MGP_PahariEiJ_G0030521 #27	Sucla2 (MGP_PahariEiJ_G0030522) #28	Htr2a (MGP_PahariEiJ_G0030523) #29	Esd (MGP_PahariEiJ_G0030524)	Lrch1 (MGP_PahariEiJ_G0030525)	Rubcnl (MGP_PahariEiJ_G0030526)	Lrrc63 (MGP_PahariEiJ_G0030527)	Lcp1 (MGP_PahariEiJ_G0030528)	Cpb2 (MGP_PahariEiJ_G0030529)	Zc3h13 (MGP_PahariEiJ_G0030530)
Rat	MODERN SPECIES	6	Nudt18 (ENSRNOG00000011831)	Fhip2b (ENSRNOG00000012014)	Dmtn (ENSRNOG00000012273)	Fgf17 (ENSRNOG00000012912)	Npm2 (ENSRNOG00000025638)	Xpo7 (ENSRNOG00000013288)	Dok2 (ENSRNOG00000013922)	Gfra2 (ENSRNOG00000014010)	ENSRNOG00000065077	Dpm3 (ENSRNOG00000029077)	Ndufb2 (ENSRNOG00000026616)	Gm9195 (ENSRNOG00000064068)	Fndc3a (ENSRNOG00000014478) #20	Cysltr2 (ENSRNOG00000067464) #21	ENSRNOG00000067330	Rcbtb2 (ENSRNOG00000015054) #22	Rb1 (ENSRNOG00000016029) #23	Lpar6 (ENSRNOG00000015577) #24	Itm2b (ENSRNOG00000016271) #25	Med4 (ENSRNOG00000017170) #26	Nudt15 (ENSRNOG00000025239) #27	Sucla2 (ENSRNOG00000017481) #28	Htr2a (ENSRNOG00000010063) #29	Esd (ENSRNOG00000009512)	Lrch1 (ENSRNOG00000009412)	Rubcnl (ENSRNOG00000022760)	Lrrc63 (ENSRNOG00000038291)	Esco2-ps2 (ENSRNOG00000029520)	Lcp1 (ENSRNOG00000010319)	Cpb2 (ENSRNOG00000010935)	Zc3h13 (ENSRNOG00000011237)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1865	Cryl1 (ENSNGAG00000014751)	Gjb6 (ENSNGAG00000000185)	Gjb2 (ENSNGAG00000001303)	Gja3 (ENSNGAG00000007139)	Zmym2 (ENSNGAG00000015366)	Zmym5 (ENSNGAG00000013371)	Pspc1 (ENSNGAG00000011271)	ENSNGAG00000012934	Parp4 (ENSNGAG00000018396)	Cenpj (ENSNGAG00000005641)	Rnf17 (ENSNGAG00000013553)	ENSNGAG00000016258	Atp12a (ENSNGAG00000019943)	Fndc3a (ENSNGAG00000010472) #20	ENSNGAG00000018220	Rcbtb2 (ENSNGAG00000001130) #22	Rb1 (ENSNGAG00000018650) #23	Lpar6 (ENSNGAG00000020986) #24	Itm2b (ENSNGAG00000001145) #25	ENSNGAG00000019721	Med4 (ENSNGAG00000016010) #26	Nudt15 (ENSNGAG00000017219) #27	Sucla2 (ENSNGAG00000018304) #28	Htr2a (ENSNGAG00000003790) #29	Esd (ENSNGAG00000010945)	Lrch1 (ENSNGAG00000018822)	Lrrc63 (ENSNGAG00000020059)	Lcp1 (ENSNGAG00000000826)	Cpb2 (ENSNGAG00000014141)	Zc3h13 (ENSNGAG00000002157)	Siah3 (ENSNGAG00000012014)
Lesser Egyptian jerboa	MODERN SPECIES	126	ENSJJAG00000011928	ENSJJAG00000000096	Zmym2 (ENSJJAG00000000041)	ENSJJAG00000011896	Zmym5 (ENSJJAG00000019107)	Pspc1 (ENSJJAG00000018334)	ENSJJAG00000012170	ENSJJAG00000017955	ENSJJAG00000017852	Cenpj (ENSJJAG00000017738)	Rnf17 (ENSJJAG00000016584)	Atp12a (ENSJJAG00000015041)	ENSJJAG00000014533	Fndc3a (ENSJJAG00000014349) #20	Cysltr2 (ENSJJAG00000012101) #21	Rcbtb2 (ENSJJAG00000013527) #22	Lpar6 (ENSJJAG00000013010) #24	Rb1 (ENSJJAG00000011981) #23	Itm2b (ENSJJAG00000010530) #25	Med4 (ENSJJAG00000010462) #26	ENSJJAG00000010126 #28	ENSJJAG00000009879	ENSJJAG00000012033	ENSJJAG00000006493	Htr2a (ENSJJAG00000005538) #29	Esd (ENSJJAG00000004979)	Lrch1 (ENSJJAG00000000346)	Rubcnl (ENSJJAG00000021497)	Lcp1 (ENSJJAG00000021331)	Cpb2 (ENSJJAG00000020705)	Zc3h13 (ENSJJAG00000019971)
Kangaroo rat	MODERN SPECIES	320	ENSDORG00000023318	Pspc1 (ENSDORG00000016050)	ENSDORG00000024933	Zmym2 (ENSDORG00000014720)	Gja3 (ENSDORG00000012415)	Gjb2 (ENSDORG00000023482)	Gjb6 (ENSDORG00000015151)	ENSDORG00000030047	Cryl1 (ENSDORG00000011355)	Ift88 (ENSDORG00000001573)	Cdadc1 (ENSDORG00000000386) #18	ENSDORG00000023605 #19	Fndc3a (ENSDORG00000000383) #20	ENSDORG00000029762	ENSDORG00000016215	Rcbtb2 (ENSDORG00000013999) #22	Lpar6 (ENSDORG00000013998) #24	Rb1 (ENSDORG00000013995) #23	Itm2b (ENSDORG00000025543) #25	Med4 (ENSDORG00000024480) #26	Nudt15 (ENSDORG00000003751) #27	Sucla2 (ENSDORG00000010319) #28	Htr2a (ENSDORG00000029019) #29	Esd (ENSDORG00000013997)	Lrch1 (ENSDORG00000013992)	ENSDORG00000024657	Rubcnl (ENSDORG00000014634)	Lcp1 (ENSDORG00000000603)	Cpb2 (ENSDORG00000000602)	Zc3h13 (ENSDORG00000000600)	Siah3 (ENSDORG00000024143)
Rodentia_A	ANCESTRAL SPECIES	22	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Sciuridae	ANCESTRAL SPECIES	34	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Marmotini	ANCESTRAL SPECIES	29	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Marmotini_b	ANCESTRAL SPECIES	110	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585
Squirrel	MODERN SPECIES	165	RNASEH2B (ENSSTOG00000015126)	DLEU7 (ENSSTOG00000022745)	KCNRG (ENSSTOG00000001023) #7	TRIM13 (ENSSTOG00000024506) #8	SPRYD7 (ENSSTOG00000029895) #9	KPNA3 (ENSSTOG00000003006) #10	EBPL (ENSSTOG00000002999) #11	RCBTB1 (ENSSTOG00000028110) #13	PHF11 (ENSSTOG00000023483) #14	SETDB2 (ENSSTOG00000002985) #15	CAB39L (ENSSTOG00000002967) #16	ENSSTOG00000021927	CDADC1 (ENSSTOG00000011972) #18	MLNR (ENSSTOG00000011965) #19	FNDC3A (ENSSTOG00000011923) #20	RCBTB2 (ENSSTOG00000014863) #22	LPAR6 (ENSSTOG00000026961) #24	RB1 (ENSSTOG00000000927) #23	ITM2B (ENSSTOG00000007270) #25	MED4 (ENSSTOG00000001343) #26	NUDT15 (ENSSTOG00000001335) #27	SUCLA2 (ENSSTOG00000003010) #28	HTR2A (ENSSTOG00000002863) #29	ESD (ENSSTOG00000002854)	LRCH1 (ENSSTOG00000002840)
Arctic ground squirrel	MODERN SPECIES	124	DLEU7 (ENSUPAG00010003981)	KCNRG (ENSUPAG00010004022) #7	TRIM13 (ENSUPAG00010004025) #8	SPRYD7 (ENSUPAG00010004032) #9	KPNA3 (ENSUPAG00010004046) #10	EBPL (ENSUPAG00010004067) #11	ARL11 (ENSUPAG00010004075) #12	RCBTB1 (ENSUPAG00010004083) #13	PHF11 (ENSUPAG00010004112) #14	SETDB2 (ENSUPAG00010004135) #15	CAB39L (ENSUPAG00010004156) #16	CDADC1 (ENSUPAG00010004175) #18	MLNR (ENSUPAG00010004242) #19	FNDC3A (ENSUPAG00010004258) #20	CYSLTR2 (ENSUPAG00010004301)	RCBTB2 (ENSUPAG00010004306) #22	RB1 (ENSUPAG00010004366) #23	LPAR6 (ENSUPAG00010004428) #24	ITM2B (ENSUPAG00010004431) #25	MED4 (ENSUPAG00010004439) #26	NUDT15 (ENSUPAG00010004450) #27	SUCLA2 (ENSUPAG00010004459) #28	HTR2A (ENSUPAG00010004485) #29	ESD (ENSUPAG00010004501)	LRCH1 (ENSUPAG00010004570)	ENSUPAG00010004625
Alpin marmot	MODERN SPECIES	13	KCNRG (ENSMMMG00000023037) #7	TRIM13 (ENSMMMG00000023039) #8	SPRYD7 (ENSMMMG00000023040) #9	KPNA3 (ENSMMMG00000023052) #10	EBPL (ENSMMMG00000023057) #11	ARL11 (ENSMMMG00000023058) #12	RCBTB1 (ENSMMMG00000023061) #13	PHF11 (ENSMMMG00000023063) #14	SETDB2 (ENSMMMG00000023069) #15	ENSMMMG00000023071 #16	CDADC1 (ENSMMMG00000023083) #18	ENSMMMG00000023106	ENSMMMG00000023108	FNDC3A (ENSMMMG00000023109) #20	CYSLTR2 (ENSMMMG00000023126)	RCBTB2 (ENSMMMG00000023136) #22	RB1 (ENSMMMG00000023141) #23	LPAR6 (ENSMMMG00000023147) #24	ITM2B (ENSMMMG00000023154) #25	MED4 (ENSMMMG00000023156) #26	NUDT15 (ENSMMMG00000023158) #27	SUCLA2 (ENSMMMG00000023163) #28	HTR2A (ENSMMMG00000023175) #29	ESD (ENSMMMG00000023189)	LRCH1 (ENSMMMG00000023214)	RUBCNL (ENSMMMG00000023314)	LRRC63 (ENSMMMG00000023317)	LCP1 (ENSMMMG00000023327)	CPB2 (ENSMMMG00000023337)	ZC3H13 (ENSMMMG00000023343)	SIAH3 (ENSMMMG00000023403)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005002671	SPRYD7 (ENSSVLG00005002639) #9	KPNA3 (ENSSVLG00005002614) #10	EBPL (ENSSVLG00005002591) #11	ARL11 (ENSSVLG00005002576) #12	RCBTB1 (ENSSVLG00005002559) #13	ENSSVLG00005002542 #14	SETDB2 (ENSSVLG00005002488) #15	CAB39L (ENSSVLG00005002440) #16	ENSSVLG00005002409	CDADC1 (ENSSVLG00005002377) #18	MLNR (ENSSVLG00005002363) #19	ENSSVLG00005002325 #20	ENSSVLG00005002299 #20	ENSSVLG00005002284 #21	RCBTB2 (ENSSVLG00005002211) #22	LPAR6 (ENSSVLG00005002170) #24	RB1 (ENSSVLG00005002082) #23	ENSSVLG00005002047	ITM2B (ENSSVLG00005002020) #25	MED4 (ENSSVLG00005001989) #26	ENSSVLG00005001974 #27	SUCLA2 (ENSSVLG00005001944) #28	ENSSVLG00005001859 #29	ENSSVLG00005001827	LRCH1 (ENSSVLG00005001766)	RUBCNL (ENSSVLG00005001693)	ENSSVLG00005001657 #29	ENSSVLG00005001636	ENSSVLG00005001618	ENSSVLG00005001599
Hystricomorpha	ANCESTRAL SPECIES	25	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.y	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Hystricomorpha_a	ANCESTRAL SPECIES	21	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.y	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Hystricomorpha_b	ANCESTRAL SPECIES	48	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.y	ENSGT00940000159528	ENSGT00940000160585
Long-tailed chinchilla	MODERN SPECIES	138	DLEU7 (ENSCLAG00000005848)	TRIM13 (ENSCLAG00000005696) #8	SPRYD7 (ENSCLAG00000005061) #9	KPNA3 (ENSCLAG00000003858) #10	EBPL (ENSCLAG00000003551) #11	ARL11 (ENSCLAG00000005195) #12	RCBTB1 (ENSCLAG00000004132) #13	PHF11 (ENSCLAG00000003316) #14	ENSCLAG00000009026	SETDB2 (ENSCLAG00000007348) #15	CAB39L (ENSCLAG00000006518) #16	CDADC1 (ENSCLAG00000003253) #18	MLNR (ENSCLAG00000005338) #19	FNDC3A (ENSCLAG00000004945) #20	CYSLTR2 (ENSCLAG00000004826)	RCBTB2 (ENSCLAG00000008746) #22	LPAR6 (ENSCLAG00000017673) #24	RB1 (ENSCLAG00000006971) #23	ITM2B (ENSCLAG00000006439) #25	MED4 (ENSCLAG00000008512) #26	NUDT15 (ENSCLAG00000008172) #27	SUCLA2 (ENSCLAG00000007422) #28	ENSCLAG00000010853	HTR2A (ENSCLAG00000006315) #29	ESD (ENSCLAG00000005889)	LRCH1 (ENSCLAG00000004349)	RUBCNL (ENSCLAG00000003683)
Degu	MODERN SPECIES	92	ENSODEG00000006101 #9	ENSODEG00000005796	ENSODEG00000006427 #10	EBPL (ENSODEG00000006022) #11	RCBTB1 (ENSODEG00000009239) #13	SETDB2 (ENSODEG00000005653) #15	CAB39L (ENSODEG00000005405) #16	CDADC1 (ENSODEG00000005355) #18	MLNR (ENSODEG00000005947) #19	ENSODEG00000019344	FNDC3A (ENSODEG00000005882) #20	ENSODEG00000005498	CYSLTR2 (ENSODEG00000005345)	ENSODEG00000019363	ENSODEG00000006804	RCBTB2 (ENSODEG00000007840) #22	LPAR6 (ENSODEG00000019536) #24	RB1 (ENSODEG00000007075) #23	ENSODEG00000005765 #25	ENSODEG00000006829 #26	NUDT15 (ENSODEG00000006598) #27	ENSODEG00000006404	ENSODEG00000005873 #28	ENSODEG00000019388	ENSODEG00000005886	HTR2A (ENSODEG00000005410) #29	ENSODEG00000005173	LRCH1 (ENSODEG00000005209)	RUBCNL (ENSODEG00000006136)	ENSODEG00000006039	IDO1 (ENSODEG00000006588)
Guinea pig	MODERN SPECIES	6	ENSCPOG00000009047	RNASEH2B (ENSCPOG00000032527)	DLEU7 (ENSCPOG00000030950)	TRIM13 (ENSCPOG00000001929) #8	SPRYD7 (ENSCPOG00000032352) #9	KPNA3 (ENSCPOG00000004628) #10	EBPL (ENSCPOG00000038144) #11	ARL11 (ENSCPOG00000040608) #12	RCBTB1 (ENSCPOG00000002199) #13	PHF11 (ENSCPOG00000002197) #14	SETDB2 (ENSCPOG00000002194) #15	CAB39L (ENSCPOG00000003721) #16	CDADC1 (ENSCPOG00000003715) #18	FNDC3A (ENSCPOG00000003704) #20	CYSLTR2 (ENSCPOG00000001597)	RCBTB2 (ENSCPOG00000008702) #22	LPAR6 (ENSCPOG00000036002) #24	RB1 (ENSCPOG00000008683) #23	ITM2B (ENSCPOG00000039088) #25	MED4 (ENSCPOG00000039834) #26	ENSCPOG00000015058 #27	ENSCPOG00000038770 #27	SUCLA2 (ENSCPOG00000014961) #28	HTR2A (ENSCPOG00000038918) #29	ESD (ENSCPOG00000011089)	LRCH1 (ENSCPOG00000011077)	RUBCNL (ENSCPOG00000008458)	LCP1 (ENSCPOG00000001937)	CPB2 (ENSCPOG00000000649)	ZC3H13 (ENSCPOG00000000646)	SIAH3 (ENSCPOG00000033748)
Naked mole-rat female	MODERN SPECIES	2	SPRYD7 (ENSHGLG00000003741) #9	ENSHGLG00000047604	KPNA3 (ENSHGLG00000004176) #10	EBPL (ENSHGLG00000005678) #11	ARL11 (ENSHGLG00000031866) #12	RCBTB1 (ENSHGLG00000003006) #13	PHF11 (ENSHGLG00000003303) #14	SETDB2 (ENSHGLG00000003820) #15	CAB39L (ENSHGLG00000005677) #16	CDADC1 (ENSHGLG00000007415) #18	MLNR (ENSHGLG00000006363) #19	FNDC3A (ENSHGLG00000007427) #20	ENSHGLG00000011200	ENSHGLG00000034874	ENSHGLG00000043759 #21	RCBTB2 (ENSHGLG00000003102) #22	ENSHGLG00000037766	RB1 (ENSHGLG00000003581) #23	ENSHGLG00000012986	ENSHGLG00000013614 #25	MED4 (ENSHGLG00000013271) #26	NUDT15 (ENSHGLG00000037073) #27	ENSHGLG00000006869 #28	ENSHGLG00000006924	ENSHGLG00000019880	ENSHGLG00000044798	HTR2A (ENSHGLG00000041937) #29	ENSHGLG00000002764	LRCH1 (ENSHGLG00000003678)	ENSHGLG00000005637	RUBCNL (ENSHGLG00000043639)
Lagomorpha	ANCESTRAL SPECIES	100	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528
Rabbit	MODERN SPECIES	438	ENSOCUG00000006778 #11	PHF11 (ENSOCUG00000003761) #14	RCBTB1 (ENSOCUG00000003767) #13	SETDB2 (ENSOCUG00000003755) #15	ENSOCUG00000009013	CAB39L (ENSOCUG00000008239) #16	CDADC1 (ENSOCUG00000014743) #18	MLNR (ENSOCUG00000014737) #19	FNDC3A (ENSOCUG00000014679) #20	ENSOCUG00000027072 #21	ENSOCUG00000023872	ENSOCUG00000039273	ENSOCUG00000036809	ENSOCUG00000024145	ENSOCUG00000033452	RCBTB2 (ENSOCUG00000016428) #22	LPAR6 (ENSOCUG00000002383) #24	RB1 (ENSOCUG00000016404) #23	ITM2B (ENSOCUG00000025116) #25	MED4 (ENSOCUG00000012327) #26	NUDT15 (ENSOCUG00000007439) #27	SUCLA2 (ENSOCUG00000025889) #28	ENSOCUG00000014699	HTR2A (ENSOCUG00000009976) #29	ENSOCUG00000009968	LRCH1 (ENSOCUG00000009947)
Pika	MODERN SPECIES	1392													CAB39L (ENSOPRG00000010375) #16	FNDC3A (ENSOPRG00000010336) #20	CYSLTR2 (ENSOPRG00000010328)	RCBTB2 (ENSOPRG00000010309) #22	LPAR6 (ENSOPRG00000010301) #24	RB1 (ENSOPRG00000010250) #23	ITM2B (ENSOPRG00000010225) #25
Tree shrew	MODERN SPECIES	1669																RCBTB2 (ENSTBEG00000014639) #22	LPAR6 (ENSTBEG00000014606) #24	RB1 (ENSTBEG00000014454) #23	ITM2B (ENSTBEG00000014409) #25	MED4 (ENSTBEG00000014259) #26
Laurasiatheria	ANCESTRAL SPECIES	20	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Laurasiatheria_a	ANCESTRAL SPECIES	21	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Artiodactyla	ANCESTRAL SPECIES	21	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Artiodactyla_a	ANCESTRAL SPECIES	22	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Artiodactyla_b	ANCESTRAL SPECIES	22	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Cetacea	ANCESTRAL SPECIES	20	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000159853.k	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.s.a #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Odontoceti	ANCESTRAL SPECIES	21	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000159853.k	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.s.a #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Odontoceti_a	ANCESTRAL SPECIES	24	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000159853.k	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.s.a #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Odontoceti_b	ANCESTRAL SPECIES	21	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000159853.k	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.s.a #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000159853.k	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338.s.a #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Beluga whale	MODERN SPECIES	29	DLEU7 (ENSDLEG00000017502)	KCNRG (ENSDLEG00000017518) #7	TRIM13 (ENSDLEG00000017528) #8	SPRYD7 (ENSDLEG00000017540) #9	KPNA3 (ENSDLEG00000017566) #10	EBPL (ENSDLEG00000017604) #11	ARL11 (ENSDLEG00000017617) #12	RCBTB1 (ENSDLEG00000017626) #13	PHF11 (ENSDLEG00000017664) #14	SETDB2 (ENSDLEG00000017692) #15	ENSDLEG00000017746	CAB39L (ENSDLEG00000017770) #16	CDADC1 (ENSDLEG00000017796) #18	FNDC3A (ENSDLEG00000017835) #20	CYSLTR2 (ENSDLEG00000017910) #21	RCBTB2 (ENSDLEG00000017915) #22	RB1 (ENSDLEG00000017962) #23	LPAR6 (ENSDLEG00000018142) #24	ITM2B (ENSDLEG00000018145) #25	MED4 (ENSDLEG00000018152) #26	NUDT15 (ENSDLEG00000006593) #27	ENSDLEG00000006598 #28	ENSDLEG00000006628	HTR2A (ENSDLEG00000006633) #29	ESD (ENSDLEG00000006636)	LRCH1 (ENSDLEG00000006642)	RUBCNL (ENSDLEG00000006651)	LRRC63 (ENSDLEG00000006661)	LCP1 (ENSDLEG00000006675)	CPB2 (ENSDLEG00000006697)	ZC3H13 (ENSDLEG00000006744)
Narwhal	MODERN SPECIES	315	TRIM13 (ENSMMNG00015016231) #8	SPRYD7 (ENSMMNG00015016188) #9	KPNA3 (ENSMMNG00015016147) #10	EBPL (ENSMMNG00015016101) #11	ARL11 (ENSMMNG00015016072) #12	RCBTB1 (ENSMMNG00015016038) #13	PHF11 (ENSMMNG00015015972) #14	SETDB2 (ENSMMNG00015015902) #15	ENSMMNG00015015869	CAB39L (ENSMMNG00015015818) #16	CDADC1 (ENSMMNG00015015774) #18	ENSMMNG00015015744 #19	FNDC3A (ENSMMNG00015015574) #20	ENSMMNG00015015538	ENSMMNG00015015535 #21	RCBTB2 (ENSMMNG00015015490) #22	LPAR6 (ENSMMNG00015015469) #24	RB1 (ENSMMNG00015015417) #23	ITM2B (ENSMMNG00015015387) #25	MED4 (ENSMMNG00015015360) #26	ENSMMNG00015015349 #27	SUCLA2 (ENSMMNG00015015328) #28	HTR2A (ENSMMNG00015015311) #29	ESD (ENSMMNG00015015295)	LRCH1 (ENSMMNG00015015247)	RUBCNL (ENSMMNG00015015197)	LRRC63 (ENSMMNG00015015165)	LCP1 (ENSMMNG00015015119)	CPB2 (ENSMMNG00015015086)	ZC3H13 (ENSMMNG00015015021)	SIAH3 (ENSMMNG00015015004)
Vaquita	MODERN SPECIES	9	TRIM13 (ENSPSNG00000022451) #8	SPRYD7 (ENSPSNG00000022460) #9	KPNA3 (ENSPSNG00000022470) #10	EBPL (ENSPSNG00000022487) #11	ARL11 (ENSPSNG00000022492) #12	RCBTB1 (ENSPSNG00000022496) #13	PHF11 (ENSPSNG00000022507) #14	SETDB2 (ENSPSNG00000022516) #15	CAB39L (ENSPSNG00000022525) #16	ENSPSNG00000022529	CDADC1 (ENSPSNG00000010730) #18	MLNR (ENSPSNG00000010798) #19	FNDC3A (ENSPSNG00000010915) #20	ENSPSNG00000011098	ENSPSNG00000011140 #21	RCBTB2 (ENSPSNG00000011199) #22	RB1 (ENSPSNG00000011372) #23	LPAR6 (ENSPSNG00000011434) #24	ITM2B (ENSPSNG00000011455) #25	MED4 (ENSPSNG00000011552) #26	ENSPSNG00000011620 #27	ENSPSNG00000011663	SUCLA2 (ENSPSNG00000011705) #28	HTR2A (ENSPSNG00000011806) #29	ESD (ENSPSNG00000011858)	LRCH1 (ENSPSNG00000011958)	RUBCNL (ENSPSNG00000012216)	LRRC63 (ENSPSNG00000012567)	LCP1 (ENSPSNG00000012692)	CPB2 (ENSPSNG00000012884)	ZC3H13 (ENSPSNG00000013177)
Dolphin	MODERN SPECIES	477																RCBTB2 (ENSTTRG00000004261) #22	LPAR6 (ENSTTRG00000004257) #24	RB1 (ENSTTRG00000004232) #23	ITM2B (ENSTTRG00000004212) #25
Sperm whale	MODERN SPECIES	4	TRIM13 (ENSPCTG00005016076) #8	SPRYD7 (ENSPCTG00005016094) #9	KPNA3 (ENSPCTG00005016192) #10	EBPL (ENSPCTG00005016280) #11	ARL11 (ENSPCTG00005016384) #12	RCBTB1 (ENSPCTG00005016419) #13	PHF11 (ENSPCTG00005016509) #14	SETDB2 (ENSPCTG00005016607) #15	ENSPCTG00005016839	CAB39L (ENSPCTG00005016916) #16	CDADC1 (ENSPCTG00005016983) #18	MLNR (ENSPCTG00005017145) #19	FNDC3A (ENSPCTG00005017222) #20	ENSPCTG00005017346	CYSLTR2 (ENSPCTG00005017388)	RCBTB2 (ENSPCTG00005017419) #22	RB1 (ENSPCTG00005017710) #23	LPAR6 (ENSPCTG00005017780) #24	ITM2B (ENSPCTG00005017804) #25	MED4 (ENSPCTG00005017893) #26	ENSPCTG00005017946 #27	ENSPCTG00005017963 #27	SUCLA2 (ENSPCTG00005018015) #28	HTR2A (ENSPCTG00005018130) #29	ESD (ENSPCTG00005018195)	LRCH1 (ENSPCTG00005018266)	ENSPCTG00005018927	RUBCNL (ENSPCTG00005019002)	LRRC63 (ENSPCTG00005019334)	LCP1 (ENSPCTG00005019437)	CPB2 (ENSPCTG00005019480)
Blue whale	MODERN SPECIES	9	KCNRG (ENSBMSG00010014299) #7	TRIM13 (ENSBMSG00010014316) #8	SPRYD7 (ENSBMSG00010014337) #9	KPNA3 (ENSBMSG00010014406) #10	EBPL (ENSBMSG00010014472) #11	ARL11 (ENSBMSG00010014541) #12	RCBTB1 (ENSBMSG00010014563) #13	PHF11 (ENSBMSG00010014604) #14	SETDB2 (ENSBMSG00010014652) #15	CAB39L (ENSBMSG00010014720) #16	ENSBMSG00010014815	CDADC1 (ENSBMSG00010014838) #18	MLNR (ENSBMSG00010014851) #19	FNDC3A (ENSBMSG00010014911) #20	CYSLTR2 (ENSBMSG00010015059)	RCBTB2 (ENSBMSG00010015126) #22	RB1 (ENSBMSG00010015354) #23	LPAR6 (ENSBMSG00010015391) #24	ITM2B (ENSBMSG00010015413) #25	MED4 (ENSBMSG00010015472) #26	ENSBMSG00010015507	SUCLA2 (ENSBMSG00010015547) #28	HTR2A (ENSBMSG00010015606) #29	ESD (ENSBMSG00010015643)	LRCH1 (ENSBMSG00010015742)	RUBCNL (ENSBMSG00010016070)	LRRC63 (ENSBMSG00010016199)	LCP1 (ENSBMSG00010016266)	CPB2 (ENSBMSG00010016357)	ENSBMSG00010016462	SIAH3 (ENSBMSG00010016505)
Pecora	ANCESTRAL SPECIES	23	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00440000033232.c.a.a	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.f	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Percora_a	ANCESTRAL SPECIES	25	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00440000033232.c.a.a	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.f	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Bovidae	ANCESTRAL SPECIES	25	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00440000033232.c.a.a	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.f	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Caprinae	ANCESTRAL SPECIES	37	ENSGT00390000018730.A	ENSGT00390000007823	ENSGT01100000263518.A.a.a.a	ENSGT01080000257410.C	ENSGT00940000160139	ENSGT00530000063835.a	ENSGT00400000022086.b.b	ENSGT00390000017515.o.b	ENSGT00940000156537	ENSGT00390000013839	ENSGT00940000158762	ENSGT00940000161502	ENSGT00940000157379	ENSGT00940000159853	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063.a #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.f	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Goat	MODERN SPECIES	3	KCNRG (ENSCHIG00000009570) #7	TRIM13 (ENSCHIG00000010839) #8	SPRYD7 (ENSCHIG00000015127) #9	KPNA3 (ENSCHIG00000020446) #10	EBPL (ENSCHIG00000014488) #11	ARL11 (ENSCHIG00000004176) #12	ENSCHIG00000009624	RCBTB1 (ENSCHIG00000013206) #13	ENSCHIG00000021752 #14	SETDB2 (ENSCHIG00000014895) #15	CAB39L (ENSCHIG00000020668) #16	CDADC1 (ENSCHIG00000024233) #18	MLNR (ENSCHIG00000007989) #19	FNDC3A (ENSCHIG00000016024) #20	ENSCHIG00000006431 #21	RCBTB2 (ENSCHIG00000012624) #22	RB1 (ENSCHIG00000004374) #23	LPAR6 (ENSCHIG00000019533) #24	ITM2B (ENSCHIG00000012734) #25	ENSCHIG00000017652 #26	NUDT15 (ENSCHIG00000024171) #27	SUCLA2 (ENSCHIG00000018699) #28	HTR2A (ENSCHIG00000016921) #29	ENSCHIG00000021306	LRCH1 (ENSCHIG00000012630)	RUBCNL (ENSCHIG00000012197)	LRRC63 (ENSCHIG00000019710)	LCP1 (ENSCHIG00000007953)	CPB2 (ENSCHIG00000016819)	ZC3H13 (ENSCHIG00000020072)	SIAH3 (ENSCHIG00000022671)
Rambouillet Sheep	MODERN SPECIES	1	KCNRG (ENSOARG00020013280) #7	TRIM13 (ENSOARG00020013273) #8	SPRYD7 (ENSOARG00020013110) #9	KPNA3 (ENSOARG00020012953) #10	ARL11 (ENSOARG00020012929) #12	RCBTB1 (ENSOARG00020012716) #13	ENSOARG00020012627 #14	SETDB2 (ENSOARG00020012377) #15	CAB39L (ENSOARG00020012226) #16	CDADC1 (ENSOARG00020012096) #18	MLNR (ENSOARG00020012038) #19	FNDC3A (ENSOARG00020011142) #20	ENSOARG00020011095	ENSOARG00020011030	ENSOARG00020010995 #21	RCBTB2 (ENSOARG00020010807) #22	LPAR6 (ENSOARG00020010750) #24	RB1 (ENSOARG00020009781) #23	ITM2B (ENSOARG00020009664) #25	MED4 (ENSOARG00020009593) #26	ENSOARG00020009566 #27	ENSOARG00020009436 #28	HTR2A (ENSOARG00020009408) #29	ENSOARG00020009357	LRCH1 (ENSOARG00020008711)	RUBCNL (ENSOARG00020008494)	LRRC63 (ENSOARG00020008408)	ENSOARG00020008359	CPB2 (ENSOARG00020008064)	ZC3H13 (ENSOARG00020007937)	CBY2 (ENSOARG00020007846)
Bovinae	ANCESTRAL SPECIES	20	ENSGT00390000007823	ENSGT01100000263518.A.a.a.a	ENSGT01080000257410.C	ENSGT00390000014718	ENSGT00940000160139	ENSGT00530000063835.a	ENSGT00400000022086.b.b	ENSGT00390000017515.o.b	ENSGT00940000156537	ENSGT00390000013839	ENSGT00940000158762	ENSGT00940000161502	ENSGT00940000157379	ENSGT00940000159853	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00940000153244.B.z.c.b	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00440000033232.c.a.a	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.f	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT01100000263828.a.b	ENSGT00950000183097.a.a.b
Bos	ANCESTRAL SPECIES	22	ENSGT00390000007823	ENSGT01100000263518.A.a.a.a	ENSGT01080000257410.C	ENSGT00390000014718	ENSGT00940000160139	ENSGT00530000063835.a	ENSGT00400000022086.b.b	ENSGT00390000017515.o.b	ENSGT00940000156537	ENSGT00390000013839	ENSGT00940000158762	ENSGT00940000161502	ENSGT00940000157379	ENSGT00940000159853	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00940000153244.B.z.c.b	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00440000033232.c.a.a	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.f	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT01100000263828.a.b	ENSGT00950000183097.a.a.b
Bos_b	ANCESTRAL SPECIES	4	ENSGT00390000007823	ENSGT01100000263518.A.a.a.a	ENSGT00390000014718	ENSGT01080000257410.C	ENSGT00940000160139	ENSGT00530000063835.a	ENSGT00400000022086.b.b	ENSGT00390000017515.o.b	ENSGT00940000156537	ENSGT00390000013839	ENSGT00940000158762	ENSGT00940000161502	ENSGT00940000157379	ENSGT00940000159853	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00940000153244.B.z.c.b	ENSGT00950000183115.b.a #25	ENSGT00950000183123.g.a.a.a	ENSGT00390000012063 #26	ENSGT00440000033232.c.a.a	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.f	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT01100000263828.a.b
Hybrid Bos Indicus	MODERN SPECIES	3	TRIM13 (ENSBIXG00005003326) #8	SPRYD7 (ENSBIXG00005020199) #9	ENSBIXG00005020218	KPNA3 (ENSBIXG00005020259) #10	EBPL (ENSBIXG00005007836) #11	ARL11 (ENSBIXG00005020314) #12	RCBTB1 (ENSBIXG00005003427) #13	PHF11 (ENSBIXG00005020432) #14	SETDB2 (ENSBIXG00005020628) #15	CAB39L (ENSBIXG00005020883) #16	CDADC1 (ENSBIXG00005020968) #18	MLNR (ENSBIXG00005005745) #19	FNDC3A (ENSBIXG00005021155) #20	ENSBIXG00005021203	ENSBIXG00005003584 #21	RCBTB2 (ENSBIXG00005021378) #22	LPAR6 (ENSBIXG00005021400) #24	ENSBIXG00005021411	RB1 (ENSBIXG00005021439) #23	ITM2B (ENSBIXG00005021532) #25	ENSBIXG00005021562	MED4 (ENSBIXG00005000006) #26	ENSBIXG00005021596	SUCLA2 (ENSBIXG00005021655) #28	HTR2A (ENSBIXG00005021735) #29	ESD (ENSBIXG00005003676)	LRCH1 (ENSBIXG00005021912)	RUBCNL (ENSBIXG00005006830)	LRRC63 (ENSBIXG00005022158)	ENSBIXG00005022169	LCP1 (ENSBIXG00005022212)
Cow	MODERN SPECIES	3	TRIM13 (ENSBTAG00000008173) #8	SPRYD7 (ENSBTAG00000018829) #9	KPNA3 (ENSBTAG00000004850) #10	EBPL (ENSBTAG00000018410) #11	ARL11 (ENSBTAG00000016998) #12	RCBTB1 (ENSBTAG00000034269) #13	PHF11 (ENSBTAG00000013159) #14	SETDB2 (ENSBTAG00000007329) #15	ENSBTAG00000049254	CAB39L (ENSBTAG00000034222) #16	CDADC1 (ENSBTAG00000002271) #18	MLNR (ENSBTAG00000010475) #19	FNDC3A (ENSBTAG00000020681) #20	ENSBTAG00000048524	CYSLTR2 (ENSBTAG00000017508) #21	RCBTB2 (ENSBTAG00000006647) #22	LPAR6 (ENSBTAG00000006645) #24	RB1 (ENSBTAG00000006640) #23	ENSBTAG00000003560	ITM2B (ENSBTAG00000003109) #25	ENSBTAG00000024964	MED4 (ENSBTAG00000019502) #26	ENSBTAG00000050479	NUDT15 (ENSBTAG00000019501) #27	SUCLA2 (ENSBTAG00000006759) #28	HTR2A (ENSBTAG00000013498) #29	ESD (ENSBTAG00000003415)	LRCH1 (ENSBTAG00000002959)	RUBCNL (ENSBTAG00000013371)	LRRC63 (ENSBTAG00000015994)	ENSBTAG00000053178
Bos_a	ANCESTRAL SPECIES	55	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01010000228998	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00940000153244.B.z.c.b	ENSGT00950000183115.b.a #25	ENSGT00950000183123.g.a.a.a	ENSGT00390000012063 #26	ENSGT00440000033232.c.a.a	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.f	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b
Wild yak	MODERN SPECIES	1672	SPRYD7 (ENSBMUG00000001977) #9	KPNA3 (ENSBMUG00000001936) #10	ENSBMUG00000001911	ARL11 (ENSBMUG00000001893) #12	RCBTB1 (ENSBMUG00000001872) #13	ENSBMUG00000001830	PHF11 (ENSBMUG00000001807) #14	SETDB2 (ENSBMUG00000001741) #15	ENSBMUG00000001712	CAB39L (ENSBMUG00000001694) #16	CDADC1 (ENSBMUG00000001665) #18	MLNR (ENSBMUG00000001633) #19	FNDC3A (ENSBMUG00000001611) #20	ENSBMUG00000001545	ENSBMUG00000001537 #21	RCBTB2 (ENSBMUG00000001512) #22	LPAR6 (ENSBMUG00000001452) #24	RB1 (ENSBMUG00000001429) #23	ENSBMUG00000001373	ZNF34 (ENSBMUG00000001352)	C8orf33 (ENSBMUG00000001339)	ZNF16 (ENSBMUG00000001327)	ZNF250 (ENSBMUG00000000565)
Domestic yak	MODERN SPECIES	6	KPNA3 (ENSBGRG00000017654) #10	EBPL (ENSBGRG00000018006) #11	ARL11 (ENSBGRG00000018165) #12	RCBTB1 (ENSBGRG00000018215) #13	ENSBGRG00000018298	ENSBGRG00000018317 #14	ENSBGRG00000018688	SETDB2 (ENSBGRG00000018734) #15	CAB39L (ENSBGRG00000019026) #16	CDADC1 (ENSBGRG00000019174) #18	MLNR (ENSBGRG00000019319) #19	FNDC3A (ENSBGRG00000019368) #20	ENSBGRG00000019677	ENSBGRG00000019739	ENSBGRG00000019770 #21	RCBTB2 (ENSBGRG00000019788) #22	RB1 (ENSBGRG00000020100) #23	LPAR6 (ENSBGRG00000020489) #24	ENSBGRG00000020504	ITM2B (ENSBGRG00000020531) #25	ENSBGRG00000020600	MED4 (ENSBGRG00000020636) #26	ENSBGRG00000020744	NUDT15 (ENSBGRG00000020753) #27	SUCLA2 (ENSBGRG00000020790) #28	HTR2A (ENSBGRG00000020868) #29	ESD (ENSBGRG00000020909)	LRCH1 (ENSBGRG00000020993)	RUBCNL (ENSBGRG00000021526)	LRRC63 (ENSBGRG00000021956)	LCP1 (ENSBGRG00000022064)
American bison	MODERN SPECIES	2955																RCBTB2 (ENSBBBG00000004512) #22	LPAR6 (ENSBBBG00000018432) #24	RB1 (ENSBBBG00000018469) #23	ENSBBBG00000018484	ITM2B (ENSBBBG00000004557) #25	ENSBBBG00000004565	MED4 (ENSBBBG00000018533) #26	NUDT15 (ENSBBBG00000004570) #27	SUCLA2 (ENSBBBG00000004598) #28
Siberian musk deer	MODERN SPECIES	18	KCNRG (ENSMMSG00000014388) #7	TRIM13 (ENSMMSG00000014380) #8	SPRYD7 (ENSMMSG00000014349) #9	KPNA3 (ENSMMSG00000014287) #10	EBPL (ENSMMSG00000014258) #11	ARL11 (ENSMMSG00000014242) #12	RCBTB1 (ENSMMSG00000014208) #13	ENSMMSG00000014134 #14	SETDB2 (ENSMMSG00000014076) #15	CAB39L (ENSMMSG00000014014) #16	CDADC1 (ENSMMSG00000013980) #18	MLNR (ENSMMSG00000013954) #19	FNDC3A (ENSMMSG00000013859) #20	ENSMMSG00000013845 #21	ENSMMSG00000013837	RCBTB2 (ENSMMSG00000013770) #22	LPAR6 (ENSMMSG00000013747) #24	RB1 (ENSMMSG00000013661) #23	ITM2B (ENSMMSG00000013606) #25	MED4 (ENSMMSG00000013569) #26	ENSMMSG00000013552 #27	SUCLA2 (ENSMMSG00000013529) #28	HTR2A (ENSMMSG00000013507) #29	ENSMMSG00000013450	LRCH1 (ENSMMSG00000013375)	RUBCNL (ENSMMSG00000013269)	LRRC63 (ENSMMSG00000013232)	ENSMMSG00000013171	CPB2 (ENSMMSG00000013091)	ZC3H13 (ENSMMSG00000013066)	SIAH3 (ENSMMSG00000013046)
Yarkand deer	MODERN SPECIES	23	TRIM13 (ENSCHYG00000015725) #8	SPRYD7 (ENSCHYG00000015545) #9	KPNA3 (ENSCHYG00000015100) #10	EBPL (ENSCHYG00000014936) #11	ARL11 (ENSCHYG00000014869) #12	RCBTB1 (ENSCHYG00000014739) #13	ENSCHYG00000014219 #14	SETDB2 (ENSCHYG00000013870) #15	CAB39L (ENSCHYG00000013652) #16	CDADC1 (ENSCHYG00000013468) #18	MLNR (ENSCHYG00000013419) #19	FNDC3A (ENSCHYG00000012972) #20	ENSCHYG00000012913	ENSCHYG00000025124 #21	ENSCHYG00000025118	RCBTB2 (ENSCHYG00000024991) #22	LPAR6 (ENSCHYG00000024973) #24	RB1 (ENSCHYG00000024752) #23	ITM2B (ENSCHYG00000024688) #25	ENSCHYG00000024654 #26	ENSCHYG00000024649	NUDT15 (ENSCHYG00000024631) #27	ENSCHYG00000024543 #28	ENSCHYG00000024533	HTR2A (ENSCHYG00000024474) #29	ESD (ENSCHYG00000024416)	LRCH1 (ENSCHYG00000023877)	RUBCNL (ENSCHYG00000023615)	LRRC63 (ENSCHYG00000023437)	LCP1 (ENSCHYG00000023302)	CPB2 (ENSCHYG00000023124)
Camelidae	ANCESTRAL SPECIES	14	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000169427	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Arabian camel	MODERN SPECIES	5	DLEU7 (ENSCDRG00005021724)	KCNRG (ENSCDRG00005021727) #7	TRIM13 (ENSCDRG00005005392) #8	SPRYD7 (ENSCDRG00005005409) #9	KPNA3 (ENSCDRG00005005457) #10	EBPL (ENSCDRG00005005531) #11	ARL11 (ENSCDRG00005005538) #12	RCBTB1 (ENSCDRG00005005547) #13	PHF11 (ENSCDRG00005005613) #14	SETDB2 (ENSCDRG00005005649) #15	CAB39L (ENSCDRG00005005746) #16	CDADC1 (ENSCDRG00005005787) #18	ENSCDRG00005005809	FNDC3A (ENSCDRG00005005830) #20	CYSLTR2 (ENSCDRG00005006039)	RCBTB2 (ENSCDRG00005006061) #22	RB1 (ENSCDRG00005006166) #23	LPAR6 (ENSCDRG00005006495) #24	ITM2B (ENSCDRG00005006517) #25	MED4 (ENSCDRG00005006678) #26	NUDT15 (ENSCDRG00005006741) #27	SUCLA2 (ENSCDRG00005006774) #28	HTR2A (ENSCDRG00005006846) #29	ESD (ENSCDRG00005006888)	LRCH1 (ENSCDRG00005006972)	RUBCNL (ENSCDRG00005007250)	LRRC63 (ENSCDRG00005007325)	LCP1 (ENSCDRG00005007408)	CPB2 (ENSCDRG00005007487)	ZC3H13 (ENSCDRG00005007587)	SIAH3 (ENSCDRG00005007643)
Alpaca	MODERN SPECIES	593																RCBTB2 (ENSVPAG00000006886) #22	LPAR6 (ENSVPAG00000006885) #24	RB1 (ENSVPAG00000006884) #23	ITM2B (ENSVPAG00000006883) #25	NUDT15 (ENSVPAG00000006882) #27
Suina	ANCESTRAL SPECIES	29	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01050000247867	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Chacoan peccary	MODERN SPECIES	216	KCNRG (ENSCWAG00000002315) #7	TRIM13 (ENSCWAG00000002306) #8	SPRYD7 (ENSCWAG00000002290) #9	KPNA3 (ENSCWAG00000002256) #10	EBPL (ENSCWAG00000002227) #11	ARL11 (ENSCWAG00000002209) #12	RCBTB1 (ENSCWAG00000002188) #13	PHF11 (ENSCWAG00000002166) #14	SETDB2 (ENSCWAG00000002141) #15	CAB39L (ENSCWAG00000002108) #16	CDADC1 (ENSCWAG00000002080) #18	MLNR (ENSCWAG00000002068) #19	FNDC3A (ENSCWAG00000002000) #20	ENSCWAG00000001972	ENSCWAG00000001961 #21	RCBTB2 (ENSCWAG00000001915) #22	LPAR6 (ENSCWAG00000001900) #24	RB1 (ENSCWAG00000001887) #23	ITM2B (ENSCWAG00000001848) #25	MED4 (ENSCWAG00000001822) #26	NUDT15 (ENSCWAG00000001809) #27	SUCLA2 (ENSCWAG00000001786) #28	HTR2A (ENSCWAG00000001769) #29	ESD (ENSCWAG00000001743)	LRCH1 (ENSCWAG00000001714)	RUBCNL (ENSCWAG00000001665)	LRRC63 (ENSCWAG00000001640)	LCP1 (ENSCWAG00000001619)	CPB2 (ENSCWAG00000001574)	ZC3H13 (ENSCWAG00000001530)	SIAH3 (ENSCWAG00000001512)
Pig	MODERN SPECIES	2	SPRYD7 (ENSSSCG00000009390) #9	KPNA3 (ENSSSCG00000024125) #10	EBPL (ENSSSCG00000009393) #11	ARL11 (ENSSSCG00000053768) #12	RCBTB1 (ENSSSCG00000021060) #13	PHF11 (ENSSSCG00000009396) #14	SETDB2 (ENSSSCG00000009395) #15	CAB39L (ENSSSCG00000009397) #16	CDADC1 (ENSSSCG00000031598) #18	MLNR (ENSSSCG00000022064) #19	FNDC3A (ENSSSCG00000022159) #20	ENSSSCG00000052494	ENSSSCG00000048866	ENSSSCG00000039832	CYSLTR2 (ENSSSCG00000009399) #21	RCBTB2 (ENSSSCG00000009400) #22	RB1 (ENSSSCG00000009401) #23	LPAR6 (ENSSSCG00000061460) #24	ITM2B (ENSSSCG00000009403) #25	MED4 (ENSSSCG00000035098) #26	NUDT15 (ENSSSCG00000027551) #27	SUCLA2 (ENSSSCG00000009405) #28	HTR2A (ENSSSCG00000037452) #29	ESD (ENSSSCG00000009407)	LRCH1 (ENSSSCG00000009408)	RUBCNL (ENSSSCG00000009410)	LRRC63 (ENSSSCG00000009411)	LCP1 (ENSSSCG00000009412)	ENSSSCG00000034648	CPB2 (ENSSSCG00000009413)	ZC3H13 (ENSSSCG00000009414)
Laurasiatheria_b	ANCESTRAL SPECIES	21	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Laurasiatheria_c	ANCESTRAL SPECIES	22	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Chiroptera	ANCESTRAL SPECIES	65	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Microchiroptera	ANCESTRAL SPECIES	58	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Greater horseshoe bat	MODERN SPECIES	22	TRIM13 (ENSRFEG00010020213) #8	ENSRFEG00010020217	SPRYD7 (ENSRFEG00010020230) #9	KPNA3 (ENSRFEG00010020282) #10	ENSRFEG00010020394 #11	ARL11 (ENSRFEG00010020430) #12	RCBTB1 (ENSRFEG00010020444) #13	PHF11 (ENSRFEG00010020499) #14	SETDB2 (ENSRFEG00010020537) #15	CAB39L (ENSRFEG00010000253) #16	CDADC1 (ENSRFEG00010000313) #18	MLNR (ENSRFEG00010000358) #19	FNDC3A (ENSRFEG00010000465) #20	ENSRFEG00010000603	CYSLTR2 (ENSRFEG00010000615)	RCBTB2 (ENSRFEG00010000664) #22	RB1 (ENSRFEG00010000766) #23	LPAR6 (ENSRFEG00010000857) #24	ITM2B (ENSRFEG00010000875) #25	ENSRFEG00010000895	MED4 (ENSRFEG00010000908) #26	NUDT15 (ENSRFEG00010000941) #27	SUCLA2 (ENSRFEG00010000964) #28	HTR2A (ENSRFEG00010001008) #29	ENSRFEG00010001044	LRCH1 (ENSRFEG00010001090)	RUBCNL (ENSRFEG00010001205)	LRRC63 (ENSRFEG00010001264)	LCP1 (ENSRFEG00010001294)	CPB2 (ENSRFEG00010001341)	ENSRFEG00010001386
Microbat	MODERN SPECIES	944	DLEU7 (ENSMLUG00000028199)	KCNRG (ENSMLUG00000008136) #7	TRIM13 (ENSMLUG00000029988) #8	SPRYD7 (ENSMLUG00000011053) #9	KPNA3 (ENSMLUG00000003364) #10	ARL11 (ENSMLUG00000029560) #12	RCBTB1 (ENSMLUG00000003275) #13	PHF11 (ENSMLUG00000009816) #14	SETDB2 (ENSMLUG00000004378) #15	CAB39L (ENSMLUG00000002144) #16	CDADC1 (ENSMLUG00000003033) #18	ENSMLUG00000007659 #19	FNDC3A (ENSMLUG00000002625) #20	CYSLTR2 (ENSMLUG00000001386)	ENSMLUG00000023372	RCBTB2 (ENSMLUG00000008378) #22	LPAR6 (ENSMLUG00000029722) #24	RB1 (ENSMLUG00000008336) #23	ITM2B (ENSMLUG00000008317) #25	ENSMLUG00000013512	SIAH3 (ENSMLUG00000029013)	CBY2 (ENSMLUG00000010896)	ENSMLUG00000026302	COG3 (ENSMLUG00000016157)	SLC25A30 (ENSMLUG00000000506)	ENSMLUG00000017709	KCTD4 (ENSMLUG00000010523)	ENSMLUG00000010505	ENSMLUG00000008692	NUFIP1 (ENSMLUG00000008916)	ENSMLUG00000003971
Megabat	MODERN SPECIES	725																RCBTB2 (ENSPVAG00000002749) #22	LPAR6 (ENSPVAG00000002746) #24	RB1 (ENSPVAG00000002744) #23	ITM2B (ENSPVAG00000002743) #25
Equus	ANCESTRAL SPECIES	26	ENSGT00390000011737	ENSGT01100000263511.a.c.b.a.b	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.k	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Horse	MODERN SPECIES	8	TRIM13 (ENSECAG00000047808) #8	SPRYD7 (ENSECAG00000011472) #9	KPNA3 (ENSECAG00000015530) #10	EBPL (ENSECAG00000021272) #11	ARL11 (ENSECAG00000004611) #12	RCBTB1 (ENSECAG00000021791) #13	PHF11 (ENSECAG00000014972) #14	SETDB2 (ENSECAG00000020357) #15	CAB39L (ENSECAG00000000879) #16	ENSECAG00000045480	CDADC1 (ENSECAG00000020688) #18	MLNR (ENSECAG00000035160) #19	FNDC3A (ENSECAG00000023697) #20	ENSECAG00000054403	CYSLTR2 (ENSECAG00000004678)	RCBTB2 (ENSECAG00000022606) #22	RB1 (ENSECAG00000014575) #23	LPAR6 (ENSECAG00000004913) #24	ITM2B (ENSECAG00000013050) #25	MED4 (ENSECAG00000024240) #26	NUDT15 (ENSECAG00000010019) #27	SUCLA2 (ENSECAG00000011122) #28	HTR2A (ENSECAG00000024282) #29	ESD (ENSECAG00000024350)	LRCH1 (ENSECAG00000024376)	RUBCNL (ENSECAG00000016721)	LRRC63 (ENSECAG00000021952)	LCP1 (ENSECAG00000023009)	CPB2 (ENSECAG00000017329)	ZC3H13 (ENSECAG00000022843)	SIAH3 (ENSECAG00000025105)
Donkey	MODERN SPECIES	29	ENSEASG00005026329	TRIM13 (ENSEASG00005032508) #8	SPRYD7 (ENSEASG00005034019) #9	KPNA3 (ENSEASG00005017295) #10	EBPL (ENSEASG00005017294) #11	ARL11 (ENSEASG00005034787) #12	RCBTB1 (ENSEASG00005017291) #13	PHF11 (ENSEASG00005017288) #14	SETDB2 (ENSEASG00005017285) #15	ENSEASG00005017284	CAB39L (ENSEASG00005017281) #16	CDADC1 (ENSEASG00005017272) #18	MLNR (ENSEASG00005017269) #19	FNDC3A (ENSEASG00005017264) #20	CYSLTR2 (ENSEASG00005031909)	RCBTB2 (ENSEASG00005017255) #22	LPAR6 (ENSEASG00005027837) #24	RB1 (ENSEASG00005017186) #23	ENSEASG00005017162 #25
Carnivora	ANCESTRAL SPECIES	23	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Caniformia	ANCESTRAL SPECIES	24	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Canidae	ANCESTRAL SPECIES	38	ENSGT00940000162114	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063.h #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Canis_lupus	ANCESTRAL SPECIES	35	ENSGT00940000162114	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063.h #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Dog	MODERN SPECIES	14	ENSCAFG00845021910	RNASEH2B (ENSCAFG00845022142)	TRIM13 (ENSCAFG00845022686) #8	SPRYD7 (ENSCAFG00845022814) #9	KPNA3 (ENSCAFG00845022909) #10	ENSCAFG00845023073 #11	ENSCAFG00845023177	RCBTB1 (ENSCAFG00845023241) #13	SETDB2 (ENSCAFG00845023394) #14	SETDB2 (ENSCAFG00845023636) #15	CAB39L (ENSCAFG00845024041) #16	CDADC1 (ENSCAFG00845024154) #18	MLNR (ENSCAFG00845024409) #19	FNDC3A (ENSCAFG00845024522) #20	CYSLTR2 (ENSCAFG00845025181)	RCBTB2 (ENSCAFG00845025268) #22	RB1 (ENSCAFG00845025645) #23	ENSCAFG00845026699 #24	ENSCAFG00845026714 #24	ITM2B (ENSCAFG00845006529) #25	MED4 (ENSCAFG00845006629) #26	NUDT15 (ENSCAFG00845006770) #27	SUCLA2 (ENSCAFG00845006827) #28	ENSCAFG00845006932	ENSCAFG00845006950	ENSCAFG00845006976	HTR2A (ENSCAFG00845007028) #29	ESD (ENSCAFG00845007071)	LRCH1 (ENSCAFG00845007392)	RUBCNL (ENSCAFG00845007831)	LRRC63 (ENSCAFG00845008059)
Dingo	MODERN SPECIES	7	ENSCAFG00020000263	RNASEH2B (ENSCAFG00020000250)	KCNRG (ENSCAFG00020021574) #7	TRIM13 (ENSCAFG00020021573) #8	SPRYD7 (ENSCAFG00020021570) #9	KPNA3 (ENSCAFG00020020398) #10	EBPL (ENSCAFG00020020382) #11	RCBTB1 (ENSCAFG00020020302) #13	PHF11 (ENSCAFG00020020287) #14	SETDB2 (ENSCAFG00020020283) #15	CAB39L (ENSCAFG00020020273) #16	CDADC1 (ENSCAFG00020020254) #18	MLNR (ENSCAFG00020020252) #19	FNDC3A (ENSCAFG00020020131) #20	CYSLTR2 (ENSCAFG00020020126)	RCBTB2 (ENSCAFG00020020123) #22	LPAR6 (ENSCAFG00020020122) #24	RB1 (ENSCAFG00020020016) #23	ITM2B (ENSCAFG00020020009) #25	ENSCAFG00020020001 #26	NUDT15 (ENSCAFG00020019998) #27	SUCLA2 (ENSCAFG00020019425) #28	ENSCAFG00020019406	ENSCAFG00020019404	ENSCAFG00020019402	ENSCAFG00020019401	ENSCAFG00020019395	ENSCAFG00020019393	HTR2A (ENSCAFG00020019390) #29	ESD (ENSCAFG00020019388)	LRCH1 (ENSCAFG00020019384)
Red fox	MODERN SPECIES	133		TRIM13 (ENSVVUG00000028126) #8	ENSVVUG00000028128 #7	SPRYD7 (ENSVVUG00000028130) #9	KPNA3 (ENSVVUG00000028134) #10	ENSVVUG00000028141	RCBTB1 (ENSVVUG00000028145) #13	PHF11 (ENSVVUG00000028159) #14	SETDB2 (ENSVVUG00000028174) #15	CAB39L (ENSVVUG00000028181) #16	CDADC1 (ENSVVUG00000028192) #18	ENSVVUG00000028200	MLNR (ENSVVUG00000028204) #19	FNDC3A (ENSVVUG00000028213) #20	CYSLTR2 (ENSVVUG00000028233)	RCBTB2 (ENSVVUG00000028249) #22	RB1 (ENSVVUG00000028308) #23	LPAR6 (ENSVVUG00000028313) #24	ITM2B (ENSVVUG00000028315) #25	MED4 (ENSVVUG00000028319) #26	NUDT15 (ENSVVUG00000028320) #27	SUCLA2 (ENSVVUG00000028321) #28	ENSVVUG00000028325	ENSVVUG00000028335	HTR2A (ENSVVUG00000028338) #29	ESD (ENSVVUG00000028341)	LRCH1 (ENSVVUG00000028344)	ENSVVUG00000028357	RUBCNL (ENSVVUG00000028362)	LRRC63 (ENSVVUG00000028383)	LCP1 (ENSVVUG00000028385)
Caniformia_b	ANCESTRAL SPECIES	26	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Ursidae	ANCESTRAL SPECIES	27	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a.j #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.t #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Ursus	ANCESTRAL SPECIES	62	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a.j #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.t #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
American black bear	MODERN SPECIES	6282																RCBTB2 (ENSUAMG00000012042) #22	LPAR6 (ENSUAMG00000012041) #24	RB1 (ENSUAMG00000011956) #23
Polar bear	MODERN SPECIES	297	RNASEH2B (ENSUMAG00000018556)	KCNRG (ENSUMAG00000018468) #7	TRIM13 (ENSUMAG00000018465) #8	ENSUMAG00000018458 #9	KPNA3 (ENSUMAG00000018450) #10	EBPL (ENSUMAG00000018439) #11	ENSUMAG00000018437	ARL11 (ENSUMAG00000018435) #12	RCBTB1 (ENSUMAG00000018418) #13	PHF11 (ENSUMAG00000018410) #14	SETDB2 (ENSUMAG00000018406) #15	CAB39L (ENSUMAG00000018400) #16	CDADC1 (ENSUMAG00000018372) #18	FNDC3A (ENSUMAG00000018363) #20	CYSLTR2 (ENSUMAG00000018356)	RCBTB2 (ENSUMAG00000018329) #22	LPAR6 (ENSUMAG00000018323) #24	RB1 (ENSUMAG00000018061) #23	ITM2B (ENSUMAG00000017977) #25	MED4 (ENSUMAG00000017955) #26	NUDT15 (ENSUMAG00000017950) #27	SUCLA2 (ENSUMAG00000017396) #28	HTR2A (ENSUMAG00000017217) #29	ESD (ENSUMAG00000017188)	LRCH1 (ENSUMAG00000017098)	RUBCNL (ENSUMAG00000017084)	LRRC63 (ENSUMAG00000017071)	LCP1 (ENSUMAG00000016365)	CPB2 (ENSUMAG00000016276)	ZC3H13 (ENSUMAG00000016220)	SIAH3 (ENSUMAG00000016203)
Giant Panda	MODERN SPECIES	17	DLEU7 (ENSAMEG00000031072)	KCNRG (ENSAMEG00000029937) #7	TRIM13 (ENSAMEG00000019144) #8	SPRYD7 (ENSAMEG00000024680) #9	KPNA3 (ENSAMEG00000004834) #10	EBPL (ENSAMEG00000002764) #11	ARL11 (ENSAMEG00000002767) #12	RCBTB1 (ENSAMEG00000002770) #13	PHF11 (ENSAMEG00000026091) #14	SETDB2 (ENSAMEG00000003443) #15	CAB39L (ENSAMEG00000003487) #16	CDADC1 (ENSAMEG00000003499) #18	MLNR (ENSAMEG00000003522) #19	FNDC3A (ENSAMEG00000003537) #20	CYSLTR2 (ENSAMEG00000018628)	RCBTB2 (ENSAMEG00000003585) #22	RB1 (ENSAMEG00000003640) #23	LPAR6 (ENSAMEG00000018637) #24	ITM2B (ENSAMEG00000003662) #25	MED4 (ENSAMEG00000003718) #26	ENSAMEG00000003735 #27	SUCLA2 (ENSAMEG00000003745) #28	HTR2A (ENSAMEG00000025689) #29	ESD (ENSAMEG00000013377)	LRCH1 (ENSAMEG00000013313)	RUBCNL (ENSAMEG00000013284)	LRRC63 (ENSAMEG00000013282)	LCP1 (ENSAMEG00000013186)	CPB2 (ENSAMEG00000013144)	ZC3H13 (ENSAMEG00000013117)	SIAH3 (ENSAMEG00000013115)
Mustelinae	ANCESTRAL SPECIES	71	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Ferret	MODERN SPECIES	232																RCBTB2 (ENSMPUG00000001418) #22	RB1 (ENSMPUG00000001423) #23	ITM2B (ENSMPUG00000001430) #25	ENSMPUG00000001437 #26	NUDT15 (ENSMPUG00000001487) #27	SUCLA2 (ENSMPUG00000001488) #28	HTR2A (ENSMPUG00000001493) #29	ESD (ENSMPUG00000001494)	LRCH1 (ENSMPUG00000001500)	ENSMPUG00000001509	RUBCNL (ENSMPUG00000001511)	LRRC63 (ENSMPUG00000001576)	LCP1 (ENSMPUG00000001582)	CPB2 (ENSMPUG00000001590)	ZC3H13 (ENSMPUG00000001602)	SIAH3 (ENSMPUG00000001611)
American mink	MODERN SPECIES	143	ENSNVIG00000011940	KCNRG (ENSNVIG00000011840) #7	TRIM13 (ENSNVIG00000011831) #8	SPRY7 (ENSNVIG00000011792) #9	KPNA3 (ENSNVIG00000011752) #10	ENSNVIG00000011744	ARL11 (ENSNVIG00000011736) #12	RCBTB1 (ENSNVIG00000011679) #13	PHF11 (ENSNVIG00000011653) #14	SETDB2 (ENSNVIG00000011619) #15	CAB39L (ENSNVIG00000011562) #16	CDADC1 (ENSNVIG00000011480) #18	MLNR (ENSNVIG00000011471) #19	FNDC3A (ENSNVIG00000011325) #20	CYSLTR2 (ENSNVIG00000011311)	RCBTB2 (ENSNVIG00000011257) #22	LPAR6 (ENSNVIG00000011245) #24	RB1 (ENSNVIG00000011152) #23	ITM2B (ENSNVIG00000011114) #25	MED4 (ENSNVIG00000011094) #26	NUDT15 (ENSNVIG00000011088) #27	SUCLA2 (ENSNVIG00000011068) #28
Felidae	ANCESTRAL SPECIES	23	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.q #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.h	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Panthera	ANCESTRAL SPECIES	21	ENSGT00940000162114	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.q #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.h	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Panthera_a	ANCESTRAL SPECIES	23	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048.f #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.q #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864.h	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
leopard	MODERN SPECIES	14	ENSPPRG00000011237	RNASEH2B (ENSPPRG00000012450)	DLEU7 (ENSPPRG00000012760)	KCNRG (ENSPPRG00000013117) #7	TRIM13 (ENSPPRG00000014965) #8	SPRYD7 (ENSPPRG00000014014) #9	KPNA3 (ENSPPRG00000015323) #10	EBPL (ENSPPRG00000020311) #11	RCBTB1 (ENSPPRG00000023734) #13	PHF11 (ENSPPRG00000023438) #14	SETDB2 (ENSPPRG00000000069) #15	CAB39L (ENSPPRG00000001618) #16	CDADC1 (ENSPPRG00000001969) #18	MLNR (ENSPPRG00000002089) #19	FNDC3A (ENSPPRG00000003779) #20	RCBTB2 (ENSPPRG00000005884) #22	RB1 (ENSPPRG00000008573) #23	ITM2B (ENSPPRG00000009808) #25	MED4 (ENSPPRG00000009988) #26	NUDT15 (ENSPPRG00000010318) #27	ENSPPRG00000011389 #28	ENSPPRG00000011431	HTR2A (ENSPPRG00000011866) #29	ENSPPRG00000012285	LRCH1 (ENSPPRG00000015849)	RUBCNL (ENSPPRG00000000386)	LRRC63 (ENSPPRG00000001903)	LCP1 (ENSPPRG00000003176)	CPB2 (ENSPPRG00000003962)	ZC3H13 (ENSPPRG00000005440)	SIAH3 (ENSPPRG00000005707)
lion	MODERN SPECIES	1	FAM124A (ENSPLOG00000005249)	C13orf42 (ENSPLOG00000005235)	ENSPLOG00000005221	RNASEH2B (ENSPLOG00000005146)	KCNRG (ENSPLOG00000005005) #7	TRIM13 (ENSPLOG00000018181) #8	SPRYD7 (ENSPLOG00000018105) #9	KPNA3 (ENSPLOG00000018039) #10	EBPL (ENSPLOG00000018002) #11	ENSPLOG00000017966	RCBTB1 (ENSPLOG00000017935) #13	PHF11 (ENSPLOG00000017888) #14	SETDB2 (ENSPLOG00000017753) #15	CAB39L (ENSPLOG00000017703) #16	CYSLTR2 (ENSPLOG00000017683)	RCBTB2 (ENSPLOG00000017385) #22	LPAR6 (ENSPLOG00000017343) #24	RB1 (ENSPLOG00000016968) #23	ITM2B (ENSPLOG00000016805) #25	MED4 (ENSPLOG00000016692) #26	NUDT15 (ENSPLOG00000016667) #27	SUCLA2 (ENSPLOG00000016595) #28	ENSPLOG00000016567	HTR2A (ENSPLOG00000016485) #29	ESD (ENSPLOG00000016426)	LRCH1 (ENSPLOG00000016048)	RUBCNL (ENSPLOG00000015905)	LRRC63 (ENSPLOG00000015806)	LCP1 (ENSPLOG00000015767)	CPB2 (ENSPLOG00000015574)	ZC3H13 (ENSPLOG00000015430)
Tiger	MODERN SPECIES	221															FNDC3A (ENSPTIG00000018433) #20	RCBTB2 (ENSPTIG00000013056) #22	RB1 (ENSPTIG00000009545) #23	ITM2B (ENSPTIG00000007400) #25	MED4 (ENSPTIG00000006671) #26	NUDT15 (ENSPTIG00000006093) #27	SUCLA2 (ENSPTIG00000020513) #28	ENSPTIG00000019974	HTR2A (ENSPTIG00000019137) #29	ESD (ENSPTIG00000017319)	LRCH1 (ENSPTIG00000015667)	RUBCNL (ENSPTIG00000008805)	LRRC63 (ENSPTIG00000005072)	LCP1 (ENSPTIG00000019435)	CPB2 (ENSPTIG00000018397)	ZC3H13 (ENSPTIG00000014867)	SIAH3 (ENSPTIG00000014752)
Cat	MODERN SPECIES		ENSFCAG00000014259	RNASEH2B (ENSFCAG00000014257)	KCNRG (ENSFCAG00000031784) #7	TRIM13 (ENSFCAG00000028107) #8	SPRYD7 (ENSFCAG00000023216) #9	KPNA3 (ENSFCAG00000023386) #10	EBPL (ENSFCAG00000033196) #11	RCBTB1 (ENSFCAG00000044002) #13	PHF11 (ENSFCAG00000013097) #14	SETDB2 (ENSFCAG00000012034) #15	CAB39L (ENSFCAG00000014270) #16	CDADC1 (ENSFCAG00000014269) #18	MLNR (ENSFCAG00000014268) #19	FNDC3A (ENSFCAG00000030680) #20	CYSLTR2 (ENSFCAG00000040666)	RCBTB2 (ENSFCAG00000006999) #22	RB1 (ENSFCAG00000024529) #23	LPAR6 (ENSFCAG00000006998) #24	ITM2B (ENSFCAG00000039896) #25	MED4 (ENSFCAG00000015321) #26	NUDT15 (ENSFCAG00000035004) #27	SUCLA2 (ENSFCAG00000031559) #28	ENSFCAG00000026862	HTR2A (ENSFCAG00000036489) #29	ESD (ENSFCAG00000026826)	LRCH1 (ENSFCAG00000034620)	RUBCNL (ENSFCAG00000010241)	LRRC63 (ENSFCAG00000009184)	LCP1 (ENSFCAG00000009182)	CPB2 (ENSFCAG00000009181)	ZC3H13 (ENSFCAG00000004877)
Eulipotyphla	ANCESTRAL SPECIES	103																ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27
Common shrew	MODERN SPECIES	2491																RCBTB2 (ENSSARG00000001550) #22	LPAR6 (ENSSARG00000001545) #24	RB1 (ENSSARG00000001500) #23	ITM2B (ENSSARG00000001487) #25	MED4 (ENSSARG00000001473) #26	NUDT15 (ENSSARG00000001453) #27
Hedgehog	MODERN SPECIES	3744																RCBTB2 (ENSEEUG00000000084) #22	RB1 (ENSEEUG00000000076) #23
Atlantogenata	ANCESTRAL SPECIES	27	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT01030000235083
Afrotheria	ANCESTRAL SPECIES	54	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT01030000235083
Afrotheria_a	ANCESTRAL SPECIES	52	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00710000106860	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT01030000235083
Elephant	MODERN SPECIES	239	RNASEH2B (ENSLAFG00000030158)	KCNRG (ENSLAFG00000000702) #7	TRIM13 (ENSLAFG00000029759) #8	SPRYD7 (ENSLAFG00000004635) #9	KPNA3 (ENSLAFG00000001298) #10	EBPL (ENSLAFG00000017971) #11	ARL11 (ENSLAFG00000001838) #12	RCBTB1 (ENSLAFG00000014193) #13	PHF11 (ENSLAFG00000014189) #14	SETDB2 (ENSLAFG00000012612) #15	CAB39L (ENSLAFG00000018080) #16	CDADC1 (ENSLAFG00000012861) #18	MLNR (ENSLAFG00000004763) #19	FNDC3A (ENSLAFG00000016935) #20	CYSLTR2 (ENSLAFG00000011232)	RCBTB2 (ENSLAFG00000015596) #22	LPAR6 (ENSLAFG00000031818) #24	RB1 (ENSLAFG00000013579) #23	ITM2B (ENSLAFG00000004943) #25	MED4 (ENSLAFG00000000347) #26	NUDT15 (ENSLAFG00000017248) #27	ENSLAFG00000027647	SUCLA2 (ENSLAFG00000009678) #28	HTR2A (ENSLAFG00000015014) #29	ESD (ENSLAFG00000006901)	LRCH1 (ENSLAFG00000006893)	RUBCNL (ENSLAFG00000014959)	LRRC63 (ENSLAFG00000011144)	LCP1 (ENSLAFG00000009574)	CPB2 (ENSLAFG00000016759)	ENSLAFG00000016747
Hyrax	MODERN SPECIES	2952																RCBTB2 (ENSPCAG00000016816) #22	RB1 (ENSPCAG00000016702) #23
Tenrec	MODERN SPECIES	3212															ENSETEG00000004103	RCBTB2 (ENSETEG00000004102) #22
Xenarthra	ANCESTRAL SPECIES	469															ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864
Sloth	MODERN SPECIES	2902																RCBTB2 (ENSCHOG00000004667) #22
Armadillo	MODERN SPECIES	2998	PIGK (ENSDNOG00000007316)	ENSDNOG00000039352	ENSDNOG00000033078	ENSDNOG00000000459	ENSDNOG00000000463	USP33 (ENSDNOG00000000464)	MIGA1 (ENSDNOG00000044717)	NEXN (ENSDNOG00000013409)	ENSDNOG00000013200	DNAJB4 (ENSDNOG00000040813)	GIPC2 (ENSDNOG00000010996)	PTGFR (ENSDNOG00000031456)	IFI44L (ENSDNOG00000033462)	IFI44 (ENSDNOG00000007317)	ENSDNOG00000001513 #21	RCBTB2 (ENSDNOG00000037693) #22	RB1 (ENSDNOG00000013345) #23	LPAR6 (ENSDNOG00000013367) #24	ITM2B (ENSDNOG00000039110) #25	ENSDNOG00000032956	ENSDNOG00000018064 #26	NUDT15 (ENSDNOG00000023617) #27	ENSDNOG00000037553	SUCLA2 (ENSDNOG00000016140) #28	ENSDNOG00000037163	HTR2A (ENSDNOG00000008954) #29	ESD (ENSDNOG00000043846)
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00970000197615	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173288	ENSGT00950000183097.a.a.b
Marsupialia_b	ANCESTRAL SPECIES	20	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00970000197615	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173288	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621
Diprotodontia	ANCESTRAL SPECIES	24	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00970000197615	ENSGT00990000203619.B #21	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173288	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621
Diprotodontia_a	ANCESTRAL SPECIES	25	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00970000197615	ENSGT00990000203619.B #21	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173288	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT01030000234598.b.a.b.k.a	ENSGT00940000159621
koala	MODERN SPECIES	53	TRIM13 (ENSPCIG00000019431) #8	SPRYD7 (ENSPCIG00000019440) #9	KPNA3 (ENSPCIG00000002788) #10	EBPL (ENSPCIG00000002805) #11	ARL11 (ENSPCIG00000002831) #12	RCBTB1 (ENSPCIG00000002866) #13	ENSPCIG00000002895 #14	SETDB2 (ENSPCIG00000002912) #15	CAB39L (ENSPCIG00000002962) #16	CDADC1 (ENSPCIG00000002986) #18	MLNR (ENSPCIG00000003060) #19	ENSPCIG00000003125	FNDC3A (ENSPCIG00000003084) #20	ENSPCIG00000003136	ENSPCIG00000035122	RCBTB2 (ENSPCIG00000029309) #22	LPAR6 (ENSPCIG00000029308) #24	RB1 (ENSPCIG00000029307) #23	ITM2B (ENSPCIG00000029306) #25	ENSPCIG00000029305	MED4 (ENSPCIG00000029302) #26	NUDT15 (ENSPCIG00000029301) #27	ZCRB1 (ENSPCIG00000029300)	SUCLA2 (ENSPCIG00000016781) #28	HTR2A (ENSPCIG00000006885) #29	ESD (ENSPCIG00000006890)	LRCH1 (ENSPCIG00000006904)	ENSPCIG00000007025	ENSPCIG00000007027	ENSPCIG00000007026	LCP1 (ENSPCIG00000007028)
Common wonbat	MODERN SPECIES	342			KPNA3 (ENSVURG00010023417) #10	EBPL (ENSVURG00010023420) #11	ARL11 (ENSVURG00010023422) #12	RCBTB1 (ENSVURG00010023423) #13	ENSVURG00010023425 #14	ENSVURG00010023427	ENSVURG00010023428 #15	CAB39L (ENSVURG00010023430) #16	CDADC1 (ENSVURG00010023432) #18	MLNR (ENSVURG00010023433) #19	FNDC3A (ENSVURG00010023437) #20	ENSVURG00010023445	ENSVURG00010023449 #21	RCBTB2 (ENSVURG00010023456) #22	RB1 (ENSVURG00010023466) #23	LPAR6 (ENSVURG00010023472) #24	ITM2B (ENSVURG00010023473) #25	ENSVURG00010023475	MED4 (ENSVURG00010023479) #26	NUDT15 (ENSVURG00010023481) #27	SUCLA2 (ENSVURG00010023483) #28	ENSVURG00010023489	HTR2A (ENSVURG00010023492) #29	ENSVURG00010023498	LRCH1 (ENSVURG00010023509)	RUBCNL (ENSVURG00010023522)	ENSVURG00010023527	LCP1 (ENSVURG00010023528)	ENSVURG00010000640
Tasmanian devil	MODERN SPECIES	2	RNASEH2B (ENSSHAG00000016190)	ENSSHAG00000026893	TRIM13 (ENSSHAG00000027943) #8	SPRYD7 (ENSSHAG00000032291) #9	KPNA3 (ENSSHAG00000002380) #10	EBPL (ENSSHAG00000026290) #11	ARL11 (ENSSHAG00000004853) #12	RCBTB1 (ENSSHAG00000005837) #13	SETDB2 (ENSSHAG00000007281) #15	CAB39L (ENSSHAG00000029616) #16	CDADC1 (ENSSHAG00000009406) #18	ENSSHAG00000030574	FNDC3A (ENSSHAG00000010067) #20	ENSSHAG00000023617	ENSSHAG00000012802 #21	RCBTB2 (ENSSHAG00000013842) #22	LPAR6 (ENSSHAG00000027480) #24	RB1 (ENSSHAG00000014024) #23	ITM2B (ENSSHAG00000014885) #25	ENSSHAG00000005331	MED4 (ENSSHAG00000005253) #26	NUDT15 (ENSSHAG00000022268) #27	SUCLA2 (ENSSHAG00000006415) #28	HTR2A (ENSSHAG00000008685) #29	ESD (ENSSHAG00000024732)	LRCH1 (ENSSHAG00000009981)	ENSSHAG00000012182	ENSSHAG00000030777	ENSSHAG00000013328	ENSSHAG00000031322	ENSSHAG00000002301
Opossum	MODERN SPECIES	3	TRIM13 (ENSMODG00000024106) #8	ENSMODG00000010799 #9	KPNA3 (ENSMODG00000010829) #10	EBPL (ENSMODG00000039408) #11	ARL11 (ENSMODG00000024105) #12	RCBTB1 (ENSMODG00000010861) #13	ENSMODG00000027544 #14	ENSMODG00000047466	SETDB2 (ENSMODG00000010929) #15	CAB39L (ENSMODG00000010950) #16	CDADC1 (ENSMODG00000010997) #18	MLNR (ENSMODG00000011007) #19	FNDC3A (ENSMODG00000011079) #20	ENSMODG00000048969	ENSMODG00000024101 #21	RCBTB2 (ENSMODG00000011140) #22	RB1 (ENSMODG00000011168) #23	LPAR6 (ENSMODG00000011179) #24	ENSMODG00000011189 #25	ENSMODG00000051554	MED4 (ENSMODG00000011210) #26	ENSMODG00000011215	NUDT15 (ENSMODG00000039008) #27	ENSMODG00000029176	SUCLA2 (ENSMODG00000011236) #28	HTR2A (ENSMODG00000011274) #29	ESD (ENSMODG00000011290)	LRCH1 (ENSMODG00000011348)	ENSMODG00000029107	ENSMODG00000011358	LCP1 (ENSMODG00000011413)
Platypus	MODERN SPECIES	12	FAM124A (ENSOANG00000015533)	ENSOANG00000015535	RNASEH2B (ENSOANG00000015537)	KCNRG (ENSOANG00000015538) #7	TRIM13 (ENSOANG00000015539) #8	SPRYD7 (ENSOANG00000043027) #9	KPNA3 (ENSOANG00000015542) #10	ENSOANG00000045202 #11	RCBTB1 (ENSOANG00000038043) #13	SETDB2 (ENSOANG00000015546) #15	CAB39L (ENSOANG00000022493) #16	CDADC1 (ENSOANG00000015548) #18	MLNR (ENSOANG00000050133) #19	FNDC3A (ENSOANG00000015550) #20	CYSLTR2 (ENSOANG00000015552)	RCBTB2 (ENSOANG00000015554) #22	RB1 (ENSOANG00000015555) #23	LPAR6 (ENSOANG00000043938) #24	MED4 (ENSOANG00000045146) #26	ITM2B (ENSOANG00000015558) #25	NUDT15 (ENSOANG00000051200) #27	SUCLA2 (ENSOANG00000015563) #28	ESD (ENSOANG00000015566)	LRCH1 (ENSOANG00000015567)	RUBCNL (ENSOANG00000015572)	LCP1 (ENSOANG00000015575)	CPB2 (ENSOANG00000015578)	ZC3H13 (ENSOANG00000015580)	SIAH3 (ENSOANG00000051226)	ENSOANG00000028229	SLC25A30 (ENSOANG00000015582)
Sauria	ANCESTRAL SPECIES	2	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT01040000240539	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT01030000235083
Archelosauria	ANCESTRAL SPECIES		ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT01040000240539	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT01030000235083
Archosauria	ANCESTRAL SPECIES	2	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Aves	ANCESTRAL SPECIES		ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Neognathae	ANCESTRAL SPECIES	1	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT00990000211105	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT00990000211105	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Anatidae	ANCESTRAL SPECIES	16	ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT00990000211105	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Pink-footed goose	MODERN SPECIES	88	RNASEH2B (ENSABRG00000005646)	DLEU7 (ENSABRG00000005671)	KCNRG (ENSABRG00000005718) #7	TRIM13 (ENSABRG00000005719) #8	SPRYD7 (ENSABRG00000005725) #9	KPNA3 (ENSABRG00000005728) #10	ARL11 (ENSABRG00000005745) #12	RCBTB1 (ENSABRG00000005768) #13	PHF11 (ENSABRG00000005790) #14	SETDB2 (ENSABRG00000005808) #15	CAB39L (ENSABRG00000005841) #16	CDADC1 (ENSABRG00000005856) #18	MLNR (ENSABRG00000005864) #19	FNDC3A (ENSABRG00000005875) #20	CYSLTR2 (ENSABRG00000005903)	RCBTB2 (ENSABRG00000005909) #22	RB1 (ENSABRG00000005918) #23	LPAR6 (ENSABRG00000005948) #24	ITM2B (ENSABRG00000005957) #25	MED4 (ENSABRG00000005968) #26	NUDT15 (ENSABRG00000005976) #27	SUCLA2 (ENSABRG00000005994) #28	HTR2A (ENSABRG00000006015) #29	ESD (ENSABRG00000006025)	LRCH1 (ENSABRG00000006051)	RUBCNL (ENSABRG00000006110)	LCP1 (ENSABRG00000006152)	CPB2 (ENSABRG00000006161)	ZC3H13 (ENSABRG00000006184)	SIAH3 (ENSABRG00000006210)	ENSABRG00000006220
Duck	MODERN SPECIES		DLEU7 (ENSAPLG00000008954)	KCNRG (ENSAPLG00000025822) #7	TRIM13 (ENSAPLG00000001137) #8	SPRYD7 (ENSAPLG00000007617) #9	KPNA3 (ENSAPLG00000007820) #10	ARL11 (ENSAPLG00000008269) #12	RCBTB1 (ENSAPLG00000008303) #13	PHF11 (ENSAPLG00000008888) #14	SETDB2 (ENSAPLG00000009061) #15	CAB39L (ENSAPLG00000009191) #16	CDADC1 (ENSAPLG00000009321) #18	MLNR (ENSAPLG00000024039) #19	FNDC3A (ENSAPLG00000009605) #20	ENSAPLG00000029898	CYSLTR2 (ENSAPLG00000001160)	RCBTB2 (ENSAPLG00000007415) #22	RB1 (ENSAPLG00000007734) #23	LPAR6 (ENSAPLG00000000875) #24	ITM2B (ENSAPLG00000008210) #25	MED4 (ENSAPLG00000008395) #26	NUDT15 (ENSAPLG00000021981) #27	SUCLA2 (ENSAPLG00000008417) #28	ENSAPLG00000023867	HTR2A (ENSAPLG00000011672) #29	ESD (ENSAPLG00000014654)	LRCH1 (ENSAPLG00000014780)	RUBCNL (ENSAPLG00000015418)	ENSAPLG00000020396	LCP1 (ENSAPLG00000000904)	CPB2 (ENSAPLG00000002595)	ZC3H13 (ENSAPLG00000002707)
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00390000011439	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173288	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163
Turkey	MODERN SPECIES		ENSMGAG00000014999	ENSMGAG00000014998	ENSMGAG00000015000	ENSMGAG00000015023	ENSMGAG00000015003 #29	ENSMGAG00000015002	ENSMGAG00000019843	ENSMGAG00000018600 #29	SUCLA2 (ENSMGAG00000015004) #28	ENSMGAG00000015006 #26	ENSMGAG00000021154 #27	ITM2B (ENSMGAG00000015007) #25	ENSMGAG00000021179	ENSMGAG00000015009 #24	ENSMGAG00000015008 #23	RCBTB2 (ENSMGAG00000015010) #22	ENSMGAG00000020468 #23	ENSMGAG00000015569	ENSMGAG00000015011 #20	ENSMGAG00000015012 #19	ENSMGAG00000015014 #18	ENSMGAG00000015016 #16	ENSMGAG00000018802 #16	ENSMGAG00000017975	ARL11 (ENSMGAG00000017962) #12	RCBTB1 (ENSMGAG00000015019) #13	ENSMGAG00000015018 #14	SETDB2 (ENSMGAG00000015017) #15	ENSMGAG00000015020 #10	SPRYD7 (ENSMGAG00000017519) #9	ENSMGAG00000015022 #7
Chicken	MODERN SPECIES		RNASEH2B (ENSGALG00010002864)	DLEU7 (ENSGALG00010002820)	TRIM13 (ENSGALG00010002812) #8	SPRYD7 (ENSGALG00010004147) #9	KPNA3 (ENSGALG00010004141) #10	ARL11 (ENSGALG00010004070) #12	ENSGALG00010004097 #13	ENSGALG00010004781 #13	PHF11 (ENSGALG00010004083) #14	SETDB2 (ENSGALG00010004049) #15	CAB39L (ENSGALG00010004043) #16	CDADC1 (ENSGALG00010004002) #18	MLNR (ENSGALG00010003995) #19	FNDC3A (ENSGALG00010003986) #20	CYSLTR2 (ENSGALG00010003958)	RCBTB2 (ENSGALG00010003929) #22	LPAR6 (ENSGALG00010003920) #24	RB1 (ENSGALG00010003900) #23	ITM2B (ENSGALG00010003889) #25	MED4 (ENSGALG00010003870) #26	NUDT15 (ENSGALG00010003861) #27	SUCLA2 (ENSGALG00010003858) #28	HTR2A (ENSGALG00010004769) #29	ESD (ENSGALG00010003848)	LRCH1 (ENSGALG00010003843)	RUBCNL (ENSGALG00010003821)	ENSGALG00010003809	LCP1 (ENSGALG00010003795)	CPB2 (ENSGALG00010003750)	ZC3H13 (ENSGALG00010003734)	SIAH3 (ENSGALG00010003718)
Japanese quail	MODERN SPECIES		RNASEH2B (ENSCJPG00005019803)	DLEU7 (ENSCJPG00005019801)	KCNRG (ENSCJPG00005019795) #7	TRIM13 (ENSCJPG00005019794) #8	SPRYD7 (ENSCJPG00005019793) #9	KPNA3 (ENSCJPG00005019792) #10	ARL11 (ENSCJPG00005019791) #12	RCBTB1 (ENSCJPG00005019790) #13	PHF11 (ENSCJPG00005019789) #14	SETDB2 (ENSCJPG00005019788) #15	CAB39L (ENSCJPG00005019787) #16	CDADC1 (ENSCJPG00005019786) #18	MLNR (ENSCJPG00005019784) #19	FNDC3A (ENSCJPG00005019783) #20	CYSLTR2 (ENSCJPG00005019781)	RCBTB2 (ENSCJPG00005019778) #22	LPAR6 (ENSCJPG00005019776) #24	RB1 (ENSCJPG00005019775) #23	ITM2B (ENSCJPG00005019774) #25	MED4 (ENSCJPG00005019773) #26	ENSCJPG00005019772	NUDT15 (ENSCJPG00005019771) #27	SUCLA2 (ENSCJPG00005019770) #28	HTR2A (ENSCJPG00005019764) #29	ESD (ENSCJPG00005019763)	LRCH1 (ENSCJPG00005019762)	RUBCNL (ENSCJPG00005019761)	ENSCJPG00005019760	LCP1 (ENSCJPG00005019758)	CPB2 (ENSCJPG00005019757)	ZC3H13 (ENSCJPG00005019756)
Neognathae_b	ANCESTRAL SPECIES		ENSGT00590000083134.a.a	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT00990000211105	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528.d	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00590000083134.a.a	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528.d	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000169379
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00590000083134.a.a	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528.d	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000169379
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00590000083134.a.a	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528.d	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000169379
Medium ground finch	MODERN SPECIES	25	FAM124A (ENSGFOG00000005986)	RNASEH2B (ENSGFOG00000005963)	KCNRG (ENSGFOG00000005952) #7	TRIM13 (ENSGFOG00000005836) #8	SPRYD7 (ENSGFOG00000012225) #9	KPNA3 (ENSGFOG00000012187) #10	ARL11 (ENSGFOG00000012172) #12	RCBTB1 (ENSGFOG00000012164) #13	PHF11 (ENSGFOG00000012155) #14	SETDB2 (ENSGFOG00000012144) #15	CAB39L (ENSGFOG00000012135) #16	CDADC1 (ENSGFOG00000012132) #18	MLNR (ENSGFOG00000012122) #19	FNDC3A (ENSGFOG00000012105) #20	CYSLTR2 (ENSGFOG00000012100)	RCBTB2 (ENSGFOG00000012093) #22	LPAR6 (ENSGFOG00000012090) #24	RB1 (ENSGFOG00000012079) #23	ITM2B (ENSGFOG00000012074) #25	MED4 (ENSGFOG00000012071) #26	NUDT15 (ENSGFOG00000012066) #27	SUCLA2 (ENSGFOG00000012031) #28	HTR2A (ENSGFOG00000012020) #29	ESD (ENSGFOG00000012013)	LRCH1 (ENSGFOG00000011980)	RUBCNL (ENSGFOG00000011968)	LCP1 (ENSGFOG00000011957)	CPB2 (ENSGFOG00000011953)	ENSGFOG00000011951	ENSGFOG00000011945	SIAH3 (ENSGFOG00000011944)
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00590000083134.a.a	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528.d	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000169379
Zebra finch	MODERN SPECIES		SERPINE3 (ENSTGUG00000012096)	FAM124A (ENSTGUG00000023086)	RNASEH2B (ENSTGUG00000012104)	TRIM13 (ENSTGUG00000012115) #8	SPRYD7 (ENSTGUG00000019704) #9	KPNA3 (ENSTGUG00000012126) #10	ARL11 (ENSTGUG00000020855) #12	RCBTB1 (ENSTGUG00000012146) #13	PHF11 (ENSTGUG00000012156) #14	SETDB2 (ENSTGUG00000012159) #15	CAB39L (ENSTGUG00000012160) #16	CDADC1 (ENSTGUG00000012166) #18	MLNR (ENSTGUG00000012172) #19	FNDC3A (ENSTGUG00000012174) #20	CYSLTR2 (ENSTGUG00000024279)	RCBTB2 (ENSTGUG00000012201) #22	LPAR6 (ENSTGUG00000012222) #24	RB1 (ENSTGUG00000012205) #23	ITM2B (ENSTGUG00000012223) #25	MED4 (ENSTGUG00000022889) #26	NUDT15 (ENSTGUG00000012236) #27	SUCLA2 (ENSTGUG00000012239) #28	HTR2A (ENSTGUG00000012255) #29	ESD (ENSTGUG00000012256)	LRCH1 (ENSTGUG00000012267)	RUBCNL (ENSTGUG00000012281)	LCP1 (ENSTGUG00000012284)	CPB2 (ENSTGUG00000012294)	ZC3H13 (ENSTGUG00000012299)	SIAH3 (ENSTGUG00000012307)	ENSTGUG00000012308
Common canary	MODERN SPECIES	4	FAM124A (ENSSCAG00000012992)	RNASEH2B (ENSSCAG00000012998)	KCNRG (ENSSCAG00000013032) #7	TRIM13 (ENSSCAG00000013034) #8	SPRYD7 (ENSSCAG00000013043) #9	KPNA3 (ENSSCAG00000013069) #10	RCBTB1 (ENSSCAG00000013081) #13	ARL11 (ENSSCAG00000013085) #12	PHF11 (ENSSCAG00000013090) #14	SETDB2 (ENSSCAG00000013094) #15	CAB39L (ENSSCAG00000013101) #16	CDADC1 (ENSSCAG00000013110) #18	MLNR (ENSSCAG00000013112) #19	FNDC3A (ENSSCAG00000013116) #20	CYSLTR2 (ENSSCAG00000013136)	RCBTB2 (ENSSCAG00000013140) #22	RB1 (ENSSCAG00000013148) #23	LPAR6 (ENSSCAG00000013157) #24	ENSSCAG00000013159	ITM2B (ENSSCAG00000013161) #25	MED4 (ENSSCAG00000013164) #26	NUDT15 (ENSSCAG00000013166) #27	SUCLA2 (ENSSCAG00000013172) #28	HTR2A (ENSSCAG00000013193) #29	ESD (ENSSCAG00000013199)	LRCH1 (ENSSCAG00000013210)	RUBCNL (ENSSCAG00000013235)	LCP1 (ENSSCAG00000013250)	CPB2 (ENSSCAG00000013273)	ZC3H13 (ENSSCAG00000013302)	SIAH3 (ENSSCAG00000013336)
Flycatcher	MODERN SPECIES		SERPINE3 (ENSFALG00000008456)	FAM124A (ENSFALG00000008449)	RNASEH2B (ENSFALG00000008435)	KCNRG (ENSFALG00000027268) #7	SPRYD7 (ENSFALG00000008415) #9	KPNA3 (ENSFALG00000008405) #10	ARL11 (ENSFALG00000014468) #12	RCBTB1 (ENSFALG00000008397) #13	PHF11 (ENSFALG00000008388) #14	SETDB2 (ENSFALG00000008379) #15	CAB39L (ENSFALG00000008370) #16	CDADC1 (ENSFALG00000008368) #18	MLNR (ENSFALG00000008366) #19	FNDC3A (ENSFALG00000008353) #20	CYSLTR2 (ENSFALG00000014456)	RCBTB2 (ENSFALG00000008347) #22	LPAR6 (ENSFALG00000029001) #24	RB1 (ENSFALG00000008306) #23	ITM2B (ENSFALG00000028667) #25	MED4 (ENSFALG00000008261) #26	NUDT15 (ENSFALG00000008258) #27	SUCLA2 (ENSFALG00000008254) #28	HTR2A (ENSFALG00000008251) #29	ESD (ENSFALG00000025468)	LRCH1 (ENSFALG00000008234)	RUBCNL (ENSFALG00000008218)	LCP1 (ENSFALG00000008208)	CPB2 (ENSFALG00000008204)	ZC3H13 (ENSFALG00000008196)	SIAH3 (ENSFALG00000008195)	ENSFALG00000014437
Great tit	MODERN SPECIES		FAM124A (ENSPMJG00000014951)	RNASEH2B (ENSPMJG00000014950)	KCNRG (ENSPMJG00000014938) #7	TRIM13 (ENSPMJG00000014937) #8	SPRYD7 (ENSPMJG00000014936) #9	KPNA3 (ENSPMJG00000014935) #10	ARL11 (ENSPMJG00000014934) #12	RCBTB1 (ENSPMJG00000014932) #13	PHF11 (ENSPMJG00000014931) #14	SETDB2 (ENSPMJG00000014930) #15	CAB39L (ENSPMJG00000014929) #16	CDADC1 (ENSPMJG00000014928) #18	MLNR (ENSPMJG00000014927) #19	FNDC3A (ENSPMJG00000014926) #20	CYSLTR2 (ENSPMJG00000014925)	RCBTB2 (ENSPMJG00000014923) #22	LPAR6 (ENSPMJG00000014922) #24	RB1 (ENSPMJG00000014921) #23	ITM2B (ENSPMJG00000014920) #25	MED4 (ENSPMJG00000014918) #26	NUDT15 (ENSPMJG00000014917) #27	SUCLA2 (ENSPMJG00000014916) #28	HTR2A (ENSPMJG00000014914) #29	ESD (ENSPMJG00000014913)	LRCH1 (ENSPMJG00000014912)	RUBCNL (ENSPMJG00000014911)	LCP1 (ENSPMJG00000014910)	CPB2 (ENSPMJG00000014909)	ZC3H13 (ENSPMJG00000014908)	SIAH3 (ENSPMJG00000014907)	ENSPMJG00000014906
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00940000160941	ENSGT00590000083134.a.a	ENSGT00390000011439	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT00990000211105	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528.d	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772
Golden eagle	MODERN SPECIES	5	SERPINE3 (ENSACCG00020012759)	FAM124A (ENSACCG00020012738)	RNASEH2B (ENSACCG00020012697)	KCNRG (ENSACCG00020012660) #7	TRIM13 (ENSACCG00020012649) #8	SPRYD7 (ENSACCG00020012640) #9	KPNA3 (ENSACCG00020012597) #10	ARL11 (ENSACCG00020012574) #12	RCBTB1 (ENSACCG00020012556) #13	PHF11 (ENSACCG00020012535) #14	SETDB2 (ENSACCG00020012483) #15	CAB39L (ENSACCG00020012436) #16	CDADC1 (ENSACCG00020012412) #18	FNDC3A (ENSACCG00020012324) #20	CYSLTR2 (ENSACCG00020012257)	RCBTB2 (ENSACCG00020012227) #22	LPAR6 (ENSACCG00020012201) #24	RB1 (ENSACCG00020012131) #23	ITM2B (ENSACCG00020012021) #25	MED4 (ENSACCG00020011985) #26	NUDT15 (ENSACCG00020011958) #27	SUCLA2 (ENSACCG00020011934) #28	ENSACCG00020011887	HTR2A (ENSACCG00020011855) #29	ESD (ENSACCG00020011833)	LRCH1 (ENSACCG00020011771)	RUBCNL (ENSACCG00020011678)	LCP1 (ENSACCG00020011643)	CPB2 (ENSACCG00020011590)	ZC3H13 (ENSACCG00020011527)	SIAH3 (ENSACCG00020011489)
Kakapo	MODERN SPECIES	11	FAM124A (ENSSHBG00005001834)	RNASEH2B (ENSSHBG00005001816)	ENSSHBG00005001793	KCNRG (ENSSHBG00005001767) #7	TRIM13 (ENSSHBG00005001751) #8	SPRYD7 (ENSSHBG00005001708) #9	KPNA3 (ENSSHBG00005001660) #10	ARL11 (ENSSHBG00005001633) #12	RCBTB1 (ENSSHBG00005001601) #13	PHF11 (ENSSHBG00005001586) #14	SETDB2 (ENSSHBG00005001539) #15	CAB39L (ENSSHBG00005001515) #16	CDADC1 (ENSSHBG00005001474) #18	FNDC3A (ENSSHBG00005000045) #20	CYSLTR2 (ENSSHBG00005000035)	RCBTB2 (ENSSHBG00005000029) #22	LPAR6 (ENSSHBG00005008437) #24	RB1 (ENSSHBG00005008428) #23	ITM2B (ENSSHBG00005008421) #25	MED4 (ENSSHBG00005008402) #26	NUDT15 (ENSSHBG00005008396) #27	SUCLA2 (ENSSHBG00005008387) #28	HTR2A (ENSSHBG00005008380) #29	ESD (ENSSHBG00005008373)	LRCH1 (ENSSHBG00005008351)	RUBCNL (ENSSHBG00005008318)	LCP1 (ENSSHBG00005008297)	CPB2 (ENSSHBG00005008274)	ZC3H13 (ENSSHBG00005008235)	SIAH3 (ENSSHBG00005008221)	ENSSHBG00005008211
African ostrich	MODERN SPECIES	755	SERPINE3 (ENSSCUG00000010373)	FAM124A (ENSSCUG00000010374)	ENSSCUG00000010375	RNASEH2B (ENSSCUG00000010377)	KCNRG (ENSSCUG00000010386) #7	TRIM13 (ENSSCUG00000010387) #8	SPRYD7 (ENSSCUG00000010390) #9	KPNA3 (ENSSCUG00000010394) #10	RCBTB1 (ENSSCUG00000010399) #13	PHF11 (ENSSCUG00000010401) #14	SETDB2 (ENSSCUG00000010403) #15	CAB39L (ENSSCUG00000010404) #16	CDADC1 (ENSSCUG00000010405) #18	FNDC3A (ENSSCUG00000010406) #20	CYSLTR2 (ENSSCUG00000010410)	RCBTB2 (ENSSCUG00000010412) #22	RB1 (ENSSCUG00000010428) #23	LPAR6 (ENSSCUG00000010461) #24	ITM2B (ENSSCUG00000010463) #25	MED4 (ENSSCUG00000010465) #26	ENSSCUG00000010466	SUCLA2 (ENSSCUG00000010468) #28	HTR2A (ENSSCUG00000010470) #29	ESD (ENSSCUG00000010471)	LRCH1 (ENSSCUG00000010473)
Australian saltwater crocodile	MODERN SPECIES	27	RNASEH2B (ENSCPRG00005002315)	DLEU7 (ENSCPRG00005002287)	KCNRG (ENSCPRG00005002260) #7	TRIM13 (ENSCPRG00005002256) #8	SPRYD7 (ENSCPRG00005002255) #9	KPNA3 (ENSCPRG00005002249) #10	RCBTB1 (ENSCPRG00005002228) #13	PHF11 (ENSCPRG00005002216) #14	ENSCPRG00005002212	SETDB2 (ENSCPRG00005002206) #15	CAB39L (ENSCPRG00005002192) #16	CDADC1 (ENSCPRG00005002171) #18	MLNR (ENSCPRG00005002169) #19	FNDC3A (ENSCPRG00005002157) #20	CYSLTR2 (ENSCPRG00005002091)	RCBTB2 (ENSCPRG00005002083) #22	LPAR6 (ENSCPRG00005002061) #24	RB1 (ENSCPRG00005002044) #23	ITM2B (ENSCPRG00005002035) #25	MED4 (ENSCPRG00005002030) #26	NUDT15 (ENSCPRG00005002025) #27	SUCLA2 (ENSCPRG00005002006) #28	HTR2A (ENSCPRG00005001946) #29	ESD (ENSCPRG00005001929)	LRCH1 (ENSCPRG00005001910)	RUBCNL (ENSCPRG00005001889)	LCP1 (ENSCPRG00005001844)	CPB2 (ENSCPRG00005001803)	ZC3H13 (ENSCPRG00005001772)	SIAH3 (ENSCPRG00005001723)	ENSCPRG00005001718
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT01040000240539	ENSGT00940000159528	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT01030000235083	ENSGT00940000165996
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a.c #29	ENSGT00390000011864	ENSGT00940000159528.a	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT01030000235083	ENSGT00940000165996	ENSGT00730000111163
Emydidae	ANCESTRAL SPECIES	19	ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a.d #29
Three-toed box turtle	MODERN SPECIES									ENSTMTG00000000002 #13	PHF11 (ENSTMTG00000000003) #14	ENSTMTG00000000004 #15	CAB39L (ENSTMTG00000000005) #16	CDADC1 (ENSTMTG00000000006) #18	MLNR (ENSTMTG00000000007) #19	FNDC3A (ENSTMTG00000000008) #20	ENSTMTG00000000009 #21	RCBTB2 (ENSTMTG00000000010) #22	RB1 (ENSTMTG00000000011) #23	LPAR6 (ENSTMTG00000000012) #24	ITM2B (ENSTMTG00000000014) #25	NUDT15 (ENSTMTG00000000015) #27	ENSTMTG00000000016
painted turtle	MODERN SPECIES		ENSCPBG00000008640	KCNRG (ENSCPBG00000008627) #7	TRIM13 (ENSCPBG00000008621) #8	SPRYD7 (ENSCPBG00000008613) #9	KPNA3 (ENSCPBG00000008596) #10	EBPL (ENSCPBG00000008583) #11	ARL11 (ENSCPBG00000008579) #12	RCBTB1 (ENSCPBG00000008550) #13	PHF11 (ENSCPBG00000008536) #14	SETDB2 (ENSCPBG00000008524) #15	CAB39L (ENSCPBG00000008505) #16	CDADC1 (ENSCPBG00000008499) #18	MLNR (ENSCPBG00000008496) #19	FNDC3A (ENSCPBG00000008461) #20	CYSLTR2 (ENSCPBG00000008453)	RCBTB2 (ENSCPBG00000008438) #22	LPAR6 (ENSCPBG00000008431) #24	RB1 (ENSCPBG00000008402) #23	ITM2B (ENSCPBG00000008384) #25	MED4 (ENSCPBG00000008373) #26	NUDT15 (ENSCPBG00000008367) #27	SUCLA2 (ENSCPBG00000008358) #28	ENSCPBG00000008349 #29	ENSCPBG00000008337	LRCH1 (ENSCPBG00000008287)	RUBCNL (ENSCPBG00000008254)	LCP1 (ENSCPBG00000008230)	CPB2 (ENSCPBG00000008214)	ENSCPBG00000008192	SIAH3 (ENSCPBG00000008182)	ENSCPBG00000008175
Testudinidae	ANCESTRAL SPECIES		ENSGT00390000011737	ENSGT00940000161898 #7	ENSGT00940000159715 #8	ENSGT00390000011048 #9	ENSGT01050000244891.C.c.b #10	ENSGT00530000063715.b #11	ENSGT00940000162731 #12	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00390000004360.a.b.a.a.b #16	ENSGT00940000153676.b #18	ENSGT01100000263484.C.a.l #19	ENSGT00940000159319 #20	ENSGT00990000203619.B #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a.c #29	ENSGT00390000011864	ENSGT00940000159528.a	ENSGT00940000160585	ENSGT00950000183097.a.a.b	ENSGT00940000159160	ENSGT00730000111163	ENSGT00940000161772	ENSGT00940000153137.a.b.b.b
Abingdon island giant tortoise	MODERN SPECIES	1310																RCBTB2 (ENSCABG00000019882) #22	LPAR6 (ENSCABG00000019880) #24	RB1 (ENSCABG00000019865) #23	ITM2B (ENSCABG00000019840) #25	MED4 (ENSCABG00000019837) #26	NUDT15 (ENSCABG00000019836) #27	SUCLA2 (ENSCABG00000019801) #28
Goode s thornscrub tortoise	MODERN SPECIES		DLEU7 (ENSGEVG00005005763)	KCNRG (ENSGEVG00005005794) #7	TRIM13 (ENSGEVG00005005808) #8	SPRYD7 (ENSGEVG00005005821) #9	KPNA3 (ENSGEVG00005005843) #10	EBPL (ENSGEVG00005005869) #11	ARL11 (ENSGEVG00005005885) #12	RCBTB1 (ENSGEVG00005005905) #13	PHF11 (ENSGEVG00005005934) #14	SETDB2 (ENSGEVG00005005991) #15	CAB39L (ENSGEVG00005006065) #16	CDADC1 (ENSGEVG00005006081) #18	MLNR (ENSGEVG00005006112) #19	FNDC3A (ENSGEVG00005006289) #20	ENSGEVG00005006386 #21	RCBTB2 (ENSGEVG00005006426) #22	RB1 (ENSGEVG00005006482) #23	LPAR6 (ENSGEVG00005006519) #24	ITM2B (ENSGEVG00005006545) #25	MED4 (ENSGEVG00005006571) #26	NUDT15 (ENSGEVG00005006585) #27	SUCLA2 (ENSGEVG00005006596) #28	ENSGEVG00005006611	HTR2A (ENSGEVG00005006629) #29	ESD (ENSGEVG00005006649)	LRCH1 (ENSGEVG00005006747)	RUBCNL (ENSGEVG00005006850)	LCP1 (ENSGEVG00005006872)	CPB2 (ENSGEVG00005006904)	ENSGEVG00005006953	ZC3H13 (ENSGEVG00005006980)
Chinese turtle	MODERN SPECIES	1084															ENSPSIG00000011868	RCBTB2 (ENSPSIG00000011451) #22	ENSPSIG00000001156	LPAR6 (ENSPSIG00000001114) #24	ENSPSIG00000011343	RB1 (ENSPSIG00000008778) #23	ITM2B (ENSPSIG00000008449) #25	MED4 (ENSPSIG00000008141) #26	NUDT15 (ENSPSIG00000008134) #27	SUCLA2 (ENSPSIG00000007361) #28	ENSPSIG00000001093	ENSPSIG00000001076	HTR2A (ENSPSIG00000006940) #29	ESD (ENSPSIG00000006926)	LRCH1 (ENSPSIG00000018227)
Lepidosauria	ANCESTRAL SPECIES	111	ENSGT00940000162768.B	ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682	ENSGT00390000005581.a	ENSGT00520000055666.b	ENSGT00390000011570.t	ENSGT00940000156322	ENSGT00950000183170.b.b	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b.x #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528
Episquamata	ANCESTRAL SPECIES		ENSGT00940000163601	ENSGT01030000235116	ENSGT00940000155682	ENSGT00390000005581.a	ENSGT00520000055666.b	ENSGT00390000011570.t	ENSGT00940000156322	ENSGT00950000183170.b.b	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000003338 #27	ENSGT00390000012063 #26	ENSGT00390000010170.a.b.x #28	ENSGT01050000244937.a.a #29	ENSGT00860000133881	ENSGT00940000158114	ENSGT00940000157536.b	ENSGT00940000161407	ENSGT00940000157678	ENSGT01030000236477	ENSGT00940000157234	ENSGT00940000161024
Laterata	ANCESTRAL SPECIES	13	ENSGT00950000183546	ENSGT00940000181461	ENSGT00940000155682	ENSGT00390000005581.a	ENSGT00520000055666.b	ENSGT00390000011570.t	ENSGT00940000156322	ENSGT00950000183170.b.b	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000003338 #27	ENSGT00390000012063 #26	ENSGT00390000010170.a.b.x #28	ENSGT01050000244937.a.a #29	ENSGT00860000133881	ENSGT00940000158114	ENSGT00940000157536.b	ENSGT00940000161407	ENSGT00940000157678	ENSGT00940000157234	ENSGT00940000161024	ENSGT00940000158209 #15
Common wall lizard	MODERN SPECIES		ENSPMRG00000002049	ENSPMRG00000002055	COL6A2 (ENSPMRG00000002061)	FTCD (ENSPMRG00000002078)	SPATC1L (ENSPMRG00000002088)	LSS (ENSPMRG00000002104)	MCM3AP (ENSPMRG00000002152)	YBEY (ENSPMRG00000002313)	POFUT2 (ENSPMRG00000002339)	ADARB1 (ENSPMRG00000002397)	SLX9 (ENSPMRG00000002410)	ITGB2 (ENSPMRG00000002418)	KMO (ENSPMRG00000002431)	ENSPMRG00000002448	ENSPMRG00000002461	RCBTB2 (ENSPMRG00000002466) #22	RB1 (ENSPMRG00000002469) #23	LPAR6 (ENSPMRG00000002480) #24	ENSPMRG00000002484	ITM2B (ENSPMRG00000002490) #25	NUDT15 (ENSPMRG00000002501) #27	MED4 (ENSPMRG00000002508) #26	SUCLA2 (ENSPMRG00000002516) #28	LIG4 (ENSPMRG00000002521)	ABHD13 (ENSPMRG00000002528)	TNFSF13B (ENSPMRG00000002536)	SH3BP4 (ENSPMRG00000002553)	ENSPMRG00000002562	ENSPMRG00000002571	USP40 (ENSPMRG00000002581)	TRAF3IP1 (ENSPMRG00000002588)
Argentine black and white tegu	MODERN SPECIES	12	ENSSMRG00000021088 #14	ENSSMRG00000021087 #15	RAB20 (ENSSMRG00000021086)	COL4A2 (ENSSMRG00000021085)	COL4A1 (ENSSMRG00000021082)	IRS2 (ENSSMRG00000021081)	ABHD13 (ENSSMRG00000021080)	LIG4 (ENSSMRG00000021078)	HTR2A (ENSSMRG00000021077) #29	SUCLA2 (ENSSMRG00000021075) #28	MED4 (ENSSMRG00000021073) #26	NUDT15 (ENSSMRG00000021071) #27	ITM2B (ENSSMRG00000021070) #25	LPAR6 (ENSSMRG00000021069) #24	RB1 (ENSSMRG00000021067) #23	RCBTB2 (ENSSMRG00000021065) #22	ENSSMRG00000021064	ENSSMRG00000021055	KMO (ENSSMRG00000021047)	ITGB2 (ENSSMRG00000020985)	SLX9 (ENSSMRG00000020984)	ADARB1 (ENSSMRG00000020983)	POFUT2 (ENSSMRG00000020982)	YBEY (ENSSMRG00000020981)	MCM3AP (ENSSMRG00000020980)	LSS (ENSSMRG00000020979)	SPATC1L (ENSSMRG00000020978)	FTCD (ENSSMRG00000020977)	COL6A2 (ENSSMRG00000020975)	ENSSMRG00000020974	ENSSMRG00000020973
Toxicofera	ANCESTRAL SPECIES		ENSGT01030000235116	ENSGT00940000155682	ENSGT00390000005581.a	ENSGT00520000055666.b	ENSGT00390000011570.t	ENSGT00940000156322	ENSGT00950000183170.b.b	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a	ENSGT00390000000747	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925 #22	ENSGT00950000183202.b #23	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183115.b.a #25	ENSGT00390000003338 #27	ENSGT00390000012063 #26	ENSGT00390000010170.a.b.x #28	ENSGT01050000244937.a.a #29	ENSGT00860000133881	ENSGT00940000158114	ENSGT00940000157536.b	ENSGT00940000161407	ENSGT00940000157678	ENSGT01030000236477	ENSGT00940000157234	ENSGT00940000161024
Elapidae	ANCESTRAL SPECIES		ENSGT01050000244891.C.c.b #10	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000161024	ENSGT00940000157234	ENSGT01030000236477	ENSGT00940000157678	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a.a	ENSGT01090000259987.a.a.a.b	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000003338 #27	ENSGT00390000012063 #26	ENSGT00390000010170.a.b.x #28	ENSGT01050000244937.a.a #29	ENSGT00860000133881	ENSGT00940000158114	ENSGT00940000157536.b	ENSGT00940000161407	ENSGT00390000007989	ENSGT00950000183170.b.b	ENSGT00940000156322	ENSGT00390000011570.t
Elapidae_a	ANCESTRAL SPECIES	39	ENSGT01050000244891.C.c.b #10	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000161024	ENSGT00940000157234	ENSGT01030000236477	ENSGT00940000157678	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a.a	ENSGT01090000259987.a.a.a.b	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00940000155311.B	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000003338 #27	ENSGT00390000012063 #26	ENSGT00390000010170.a.b.x #28	ENSGT01050000244937.a.a #29	ENSGT00860000133881	ENSGT00940000158114	ENSGT00940000157536.b	ENSGT00940000161407	ENSGT00390000007989	ENSGT00950000183170.b.b	ENSGT00940000156322	ENSGT00390000011570.t
Acanthophiinae	ANCESTRAL SPECIES	39	ENSGT01050000244891.C.c.b #10	ENSGT00940000155814 #13	ENSGT00950000182865.b.a.b.b.b.a #14	ENSGT00940000158209 #15	ENSGT00940000161024	ENSGT00940000157234	ENSGT01030000236477	ENSGT00940000157678	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a.a	ENSGT01090000259987.a.a.a.b	ENSGT00390000000747	ENSGT00730000110871.a.a.a.b	ENSGT00960000192136	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000003338 #27	ENSGT00390000012063 #26	ENSGT00390000010170.a.b.x #28	ENSGT01050000244937.a.a #29	ENSGT00860000133881	ENSGT00940000158114	ENSGT00940000157536.b	ENSGT00940000161407	ENSGT00390000007989	ENSGT00950000183170.b.b	ENSGT00940000156322	ENSGT00390000011570.t
Mainland tiger snake	MODERN SPECIES	110	TRIM13 (ENSNSUG00000001176) #8	SPRYD7 (ENSNSUG00000001175) #9	KPNA3 (ENSNSUG00000001073) #10	RCBTB1 (ENSNSUG00000001026) #13	PHF11 (ENSNSUG00000001024) #14	SETDB2 (ENSNSUG00000001002) #15	RAB20 (ENSNSUG00000000995)	ENSNSUG00000000991	ENSNSUG00000000986	ENSNSUG00000000980	ADARB1 (ENSNSUG00000000477)	ENSNSUG00000000467	ITGB2 (ENSNSUG00000000454)	KMO (ENSNSUG00000000447)	ENSNSUG00000000441	RCBTB2 (ENSNSUG00000000438) #22	LPAR6 (ENSNSUG00000000434) #24	RB1 (ENSNSUG00000000430) #23	ENSNSUG00000000427	ITM2B (ENSNSUG00000000425) #25	NUDT15 (ENSNSUG00000000422) #27	MED4 (ENSNSUG00000000419) #26	SUCLA2 (ENSNSUG00000000414) #28	HTR2A (ENSNSUG00000000412) #29	LIG4 (ENSNSUG00000000410)	ABHD13 (ENSNSUG00000000406)	TNFSF13B (ENSNSUG00000000328)	IRS2 (ENSNSUG00000000056)	POFUT2 (ENSNSUG00000000048)	YBEY (ENSNSUG00000013065)	MCM3AP (ENSNSUG00000013011)
Eastern brown snake	MODERN SPECIES	36	KPNA3 (ENSPTXG00000002213) #10	RCBTB1 (ENSPTXG00000002216) #13	ENSPTXG00000002217 #14	SETDB2 (ENSPTXG00000002219) #15	RAB20 (ENSPTXG00000002221)	COL4A2 (ENSPTXG00000002222)	ENSPTXG00000002224	COL4A1 (ENSPTXG00000002225)	ADARB1 (ENSPTXG00000002229)	ENSPTXG00000002230	ENSPTXG00000002232	ENSPTXG00000002234	KMO (ENSPTXG00000002237)	ENSPTXG00000002462	ENSPTXG00000002466	RCBTB2 (ENSPTXG00000002468) #22	RB1 (ENSPTXG00000002482) #23	LPAR6 (ENSPTXG00000002559) #24	ITM2B (ENSPTXG00000002561) #25	NUDT15 (ENSPTXG00000002564) #27	MED4 (ENSPTXG00000002567) #26	SUCLA2 (ENSPTXG00000002568) #28	HTR2A (ENSPTXG00000002570) #29	LIG4 (ENSPTXG00000002573)	ABHD13 (ENSPTXG00000002576)	TNFSF13B (ENSPTXG00000002577)	IRS2 (ENSPTXG00000002597)	ENSPTXG00000002645	ENSPTXG00000002646	YBEY (ENSPTXG00000002648)	MCM3AP (ENSPTXG00000002655)
Blue-lipped sea krait	MODERN SPECIES	4518															ENSLLTG00000014290	RCBTB2 (ENSLLTG00000014296) #22
Indian cobra	MODERN SPECIES		TRIM13 (ENSNNAG00000007098) #8	SPRYD7 (ENSNNAG00000007124) #9	KPNA3 (ENSNNAG00000007146) #10	RCBTB1 (ENSNNAG00000007242) #13	PHF11 (ENSNNAG00000007272) #14	SETDB2 (ENSNNAG00000007293) #15	RAB20 (ENSNNAG00000007331)	ENSNNAG00000007365	COL4A1 (ENSNNAG00000007610)	ADARB1 (ENSNNAG00000007851)	ENSNNAG00000007923	ITGB2 (ENSNNAG00000007977)	KMO (ENSNNAG00000008887)	ENSNNAG00000008922	ENSNNAG00000009129	RCBTB2 (ENSNNAG00000009162) #22	RB1 (ENSNNAG00000009195) #23	LPAR6 (ENSNNAG00000009281) #24	ITM2B (ENSNNAG00000009301) #25	NUDT15 (ENSNNAG00000009329) #27	MED4 (ENSNNAG00000009342) #26	SUCLA2 (ENSNNAG00000009363) #28	HTR2A (ENSNNAG00000009399) #29	LIG4 (ENSNNAG00000009416)	ABHD13 (ENSNNAG00000009427)	TNFSF13B (ENSNNAG00000009437)	IRS2 (ENSNNAG00000009481)	POFUT2 (ENSNNAG00000009522)	YBEY (ENSNNAG00000009555)	MCM3AP (ENSNNAG00000009601)	LSS (ENSNNAG00000010089)
Lizard	MODERN SPECIES		ANKEF1 (ENSACAG00000001973)	PAK5 (ENSACAG00000002086)	LAMP5 (ENSACAG00000029533)	PLCB4 (ENSACAG00000002271)	ENSACAG00000034560	ENSACAG00000023830	ENSACAG00000043394	ENSACAG00000044664	TMX4 (ENSACAG00000003044)	HAO1 (ENSACAG00000003084)	ENSACAG00000039620	BMP2 (ENSACAG00000044206)	ENSACAG00000014770 #25	FERMT1 (ENSACAG00000003145)	LRRN4 (ENSACAG00000003314)	ENSACAG00000003339 #22	ENSACAG00000003413 #23	LPAR6 (ENSACAG00000021014) #24	ENSACAG00000014761 #27	ENSACAG00000042851 #26	ENSACAG00000039454	ENSACAG00000014610 #28	ENSACAG00000014570 #29	LIG4 (ENSACAG00000014566)	ABHD13 (ENSACAG00000014564)	ENSACAG00000036632	TNFSF13B (ENSACAG00000035636)	ENSACAG00000036788	COL4A1 (ENSACAG00000014194)	ENSACAG00000039388	ENSACAG00000041287
tuatara	MODERN SPECIES	1533																RCBTB2 (ENSSPUG00000011922) #22	LPAR6 (ENSSPUG00000011913) #24	RB1 (ENSSPUG00000011872) #23	ITM2B (ENSSPUG00000011856) #25	MED4 (ENSSPUG00000011843) #26	NUDT15 (ENSSPUG00000011832) #27	SUCLA2 (ENSSPUG00000011800) #28
Anura	ANCESTRAL SPECIES	3	ENSGT00940000158666	ENSGT00940000155606.b	ENSGT00950000182837.b.a	ENSGT00940000155687	ENSGT00940000159544	ENSGT00940000155808	ENSGT00530000063607.a	ENSGT01050000244940.a.a	ENSGT00940000159962	ENSGT00930000150980.b	ENSGT00390000016511	ENSGT00950000183038.a.b.a	ENSGT00530000063734.b	ENSGT00940000157032	ENSGT00940000164733	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT00950000183202.b #23	ENSGT00950000183115.b.a #25	ENSGT00390000012063 #26	ENSGT00390000003338 #27	ENSGT00390000010170.a.b #28	ENSGT01050000244937.a.a #29	ENSGT00390000011864	ENSGT00940000159528	ENSGT00940000160585	ENSGT00940000173214	ENSGT00950000183097.a.a.b	ENSGT01050000244888.b.a.c.a.t	ENSGT00940000159160	ENSGT00730000111163
Frog	MODERN SPECIES	2	ddx23 (ENSXETG00000009807)	cacnb3 (ENSXETG00000041393)	ENSXETG00000048861	ENSXETG00000047121	adcy6 (ENSXETG00000009789)	kansl2 (ENSXETG00000009782)	nckap5l (ENSXETG00000034494)	socs6 (ENSXETG00000009777)	atg101 (ENSXETG00000036801)	fmnl3 (ENSXETG00000000581)	prpf40b (ENSXETG00000000580)	nr4a1 (ENSXETG00000000579)	tamalin (ENSXETG00000035527)	acvr1b (ENSXETG00000000572)	acvrl1 (ENSXETG00000031897)	rcbtb2 (ENSXETG00000000559) #22	lpar6 (ENSXETG00000000557) #24	ENSXETG00000049131	rb1 (ENSXETG00000031493) #23	ENSXETG00000048223	itm2b (ENSXETG00000024684) #25	med4 (ENSXETG00000000549) #26	nudt15 (ENSXETG00000039868) #27	sucla2 (ENSXETG00000000548) #28	htr2a (ENSXETG00000032623) #29	esd (ENSXETG00000015425)	lrch1 (ENSXETG00000011477)	rubcnl (ENSXETG00000038667)	lrrc63 (ENSXETG00000038545)	lcp1 (ENSXETG00000014954)	ENSXETG00000038557
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000004502	KANSL2 (ENSLLEG00000004488)	NCKAP5L (ENSLLEG00000004474)	ENSLLEG00000004465	ENSLLEG00000004450	FMNL3 (ENSLLEG00000004371)	PRPF40B (ENSLLEG00000004278)	ATG101 (ENSLLEG00000004256)	ENSLLEG00000027719	TAMALIN (ENSLLEG00000027652)	ENSLLEG00000027634	ACVR1B (ENSLLEG00000027485)	ENSLLEG00000027463	ENSLLEG00000027421	ENSLLEG00000027388	RCBTB2 (ENSLLEG00000027261) #22	ENSLLEG00000027221	LPAR6 (ENSLLEG00000027201) #24	ENSLLEG00000027179	RB1 (ENSLLEG00000026737) #23	ITM2B (ENSLLEG00000026637) #25	MED4 (ENSLLEG00000026463) #26	NUDT15 (ENSLLEG00000026420) #27	SUCLA2 (ENSLLEG00000025699) #28	ENSLLEG00000025598	HTR2A (ENSLLEG00000025580) #29	ENSLLEG00000025566	ENSLLEG00000025547	ESD (ENSLLEG00000025488)	LRCH1 (ENSLLEG00000024780)	RUBCNL (ENSLLEG00000024599)
Coelacanth	MODERN SPECIES	2258															ENSLACG00000005945 #21	RCBTB2 (ENSLACG00000004010) #22
Actinopterygii	ANCESTRAL SPECIES	58														ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT01100000263536.A.b	ENSGT00950000183202.b #23	ENSGT00940000159738	ENSGT00530000063691.b	ENSGT00390000017209	ENSGT00390000013335	ENSGT00940000164070.b	ENSGT00940000154335.a	ENSGT00730000110966 #30	ENSGT00390000010017 #31	ENSGT00940000161558 #32	ENSGT00390000013518 #34	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000008657 #36
Neopterygii	ANCESTRAL SPECIES	186												ENSGT00940000164751	ENSGT00390000014574	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a #24	ENSGT01100000263536.A.b	ENSGT00950000183202.b #23	ENSGT00940000159738	ENSGT00530000063691.b	ENSGT00390000008657 #36	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558 #32	ENSGT00390000010017 #31	ENSGT00730000110966 #30	ENSGT00940000154335.a	ENSGT00940000164070.b	ENSGT00390000013335	ENSGT00390000017209
Osteoglossocephalai	ANCESTRAL SPECIES	110	ENSGT00940000158099	ENSGT00940000156875	ENSGT00440000034259.b	ENSGT00940000154216.a	ENSGT00940000155453	ENSGT00940000153733.A	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000170083	ENSGT00940000153997.b.a.b	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.b #30	ENSGT00730000110966.a.b #30	ENSGT01030000234590.B.a.a.e.a	ENSGT00940000153916.A.a	ENSGT00940000165992.a.b	ENSGT00940000153783.b.a.a.b	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c
Osteoglossiformes	ANCESTRAL SPECIES	155				ENSGT00940000166733	ENSGT00940000161206	ENSGT00950000183115.b.b.g ##25	ENSGT01100000263536.A.a.b.a	ENSGT01100000263536.A.a.a	ENSGT01040000240444.A.a.a.a.b ##24	ENSGT01030000235435	ENSGT01100000263536.B.c.b.i	ENSGT00940000163592	ENSGT01100000263484.C.a #19	ENSGT00940000159319.k #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT01030000234614.B.a.a.b.a.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Asian bonytongue	MODERN SPECIES	1	ENSSFOG00015023342	GAB2 (ENSSFOG00015023361)	ENSSFOG00015027381	tenm4 (ENSSFOG00015023372)	FAM181B (ENSSFOG00015027083)	ENSSFOG00015023388	prcp (ENSSFOG00015023394)	thrsp (ENSSFOG00015023402)	guca1c (ENSSFOG00015023410)	ENSSFOG00015029696	ENSSFOG00015032143	ENSSFOG00015023421 #19	FNDC3A (ENSSFOG00015023430) #20	ENSSFOG00015025655	ENSSFOG00015033169 #21	RCBTB2 (ENSSFOG00015023449) #22	lpar6a (ENSSFOG00015023453) #24	NEK3 (ENSSFOG00015023456)	lhfpl6 (ENSSFOG00015023462) ##35	cog6 (ENSSFOG00015023469) #34	foxo1a (ENSSFOG00015023478) #32	SLC25A15 (ENSSFOG00015023485) #30	ENSSFOG00015023492	ENSSFOG00015023499	ENSSFOG00015029641	ENSSFOG00015023511	ENSSFOG00015023517	GBE1 (ENSSFOG00015023526)	cadm2b (ENSSFOG00015023550)	rwdd2b (ENSSFOG00015023558)	usp16 (ENSSFOG00015023560)
P. kingsleyae	MODERN SPECIES	341							ENSPKIG00000022186	ENSPKIG00000022173	prcp (ENSPKIG00000022148)	thrsp (ENSPKIG00000022133)	guca1c (ENSPKIG00000022105)	ENSPKIG00000022016	ENSPKIG00000021995	FNDC3A (ENSPKIG00000021936) #20	CYSLTR2 (ENSPKIG00000021903)	RCBTB2 (ENSPKIG00000021864) #22	lpar6a (ENSPKIG00000021838) #24	zgc:172282 (ENSPKIG00000021827)	lrfn1 (ENSPKIG00000021812)	socs9 (ENSPKIG00000021804)	SAMD4B (ENSPKIG00000021772)	GMFG (ENSPKIG00000021738)	paf1 (ENSPKIG00000021679)	igsf11 (ENSPKIG00000021637)	med29 (ENSPKIG00000021625)	ENSPKIG00000021617
Clupeocephala	ANCESTRAL SPECIES	9	ENSGT00990000210146	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000170083	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.b #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Euteleosteomorpha	ANCESTRAL SPECIES	7	ENSGT01030000234618.D	ENSGT00990000210146	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Protacanthopterygii	ANCESTRAL SPECIES	123	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738
Salmoninae	ANCESTRAL SPECIES	236	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b.yb ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000178002	ENSGT00950000183026.A.b	ENSGT00940000158923.f	ENSGT00940000156013	ENSGT00390000007224.b	ENSGT00940000155947.a	ENSGT00390000017040.p
Salmoninae_a	ANCESTRAL SPECIES	112	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT01020000230338.a.b.b.a.a.a.a.c.b	ENSGT00990000203589.a.b.a.b.yb ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000178002	ENSGT00940000158923.f	ENSGT00940000156013	ENSGT00390000007224.b	ENSGT00940000155947.a	ENSGT00390000017040.p
Oncorhynchus	ANCESTRAL SPECIES	89	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT01020000230338.a.b.b.a.a.a.a.c.b	ENSGT00990000203589.a.b.a.b.yb ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000178002	ENSGT00940000158923.f	ENSGT00940000156013	ENSGT00390000007224.b	ENSGT01010000223052	ENSGT00940000155947.a
Rainbow trout	MODERN SPECIES	19	ENSOMYG00000055893	tenm4 (ENSOMYG00000076848)	FAM181B (ENSOMYG00000038947)	ENSOMYG00000038937	prcp (ENSOMYG00000064152)	rab30 (ENSOMYG00000034765)	ndufc2 (ENSOMYG00000034751)	ENSOMYG00000067232	guca1c (ENSOMYG00000034779)	ENSOMYG00000034788	zgc:153184 (ENSOMYG00000075021)	MLNR (ENSOMYG00000034813) #19	FNDC3A (ENSOMYG00000067925) #20	CYSLTR2 (ENSOMYG00000057211)	ENSOMYG00000048500	RCBTB2 (ENSOMYG00000071222) #22	lpar6a (ENSOMYG00000025670) #24	ENSOMYG00000067031	ENSOMYG00000064467	ENSOMYG00000034684 ##35	cog6 (ENSOMYG00000034709) #34	foxo1a (ENSOMYG00000065779) #32	ENSOMYG00000075786 #30	ENSOMYG00000034470	ENSOMYG00000055525	ENSOMYG00000052053	ENSOMYG00000065900	ENSOMYG00000034649	ENSOMYG00000070775	RWDD2B (ENSOMYG00000062855)	ENSOMYG00000061137
Oncorhynchus_a	ANCESTRAL SPECIES	67		ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT00940000159738	ENSGT01020000230338.a.b.b.a.a.a.a.c.b	ENSGT00990000203589.a.b.a.b.yb ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000178002	ENSGT00940000158923.f	ENSGT00940000156013	ENSGT00390000007224.b	ENSGT01010000223052	ENSGT00940000155947.a	ENSGT00390000017040.p
Coho salmon	MODERN SPECIES	6	nars2 (ENSOKIG00005027367)	tenm4 (ENSOKIG00005025840)	ENSOKIG00005025689	FAM181B (ENSOKIG00005025669)	ENSOKIG00005025643	prcp (ENSOKIG00005025180)	rab30 (ENSOKIG00005025120)	ndufc2 (ENSOKIG00005025101)	thrsp (ENSOKIG00005025092)	guca1c (ENSOKIG00005025070)	ENSOKIG00005025052	ENSOKIG00005025034	ENSOKIG00005025012 #19	FNDC3A (ENSOKIG00005020408) #20	CYSLTR2 (ENSOKIG00005020092)	RCBTB2 (ENSOKIG00005019905) #22	ENSOKIG00005019882	ENSOKIG00005019844	ENSOKIG00005019833	ENSOKIG00005019827	ENSOKIG00005019818 ##35	cog6 (ENSOKIG00005019263) #34	ENSOKIG00005019194	foxo1a (ENSOKIG00005019178) #32	ENSOKIG00005019125	ENSOKIG00005019103	ENSOKIG00005019085 #30	ENSOKIG00005019072	BACH1 (ENSOKIG00005019066)	usp16 (ENSOKIG00005019050)	rwdd2b (ENSOKIG00005019039)
Chinook salmon	MODERN SPECIES	573																ENSOTSG00005024112 #22	ENSOTSG00005024113 #21
Salmo	ANCESTRAL SPECIES	13	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT01020000230338.a.b.b.a.a.a.a.c.b	ENSGT00990000203589.a.b.a.b.yb ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT00950000183026.B.c.a	ENSGT00940000178002	ENSGT00940000158923.f	ENSGT00940000156013	ENSGT00390000007224.b	ENSGT00940000155947.a	ENSGT00940000155349.c	ENSGT00940000156253.a.b
River trout	MODERN SPECIES	18	ENSSTUG00000005144	ENSSTUG00000005135	ENSSTUG00000005128	FAM181B (ENSSTUG00000005116)	ENSSTUG00000005096	prcp (ENSSTUG00000004715)	rab30 (ENSSTUG00000004695)	ndufc2 (ENSSTUG00000004692)	thrsp (ENSSTUG00000004690)	guca1c (ENSSTUG00000004680)	ENSSTUG00000004653	zgc:153184 (ENSSTUG00000004629)	ENSSTUG00000004623	MLNR (ENSSTUG00000004617) #19	ENSSTUG00000003849 #20	RCBTB2 (ENSSTUG00000003546) #22	ENSSTUG00000003513	ENSSTUG00000015640	LHFPL1 (ENSSTUG00000015633) ##35	cog6 (ENSSTUG00000015622) #34	ENSSTUG00000015616	ENSSTUG00000015613	foxo1a (ENSSTUG00000015510) #32	ENSSTUG00000015494	ENSSTUG00000015465	BACH1 (ENSSTUG00000015455)	usp16 (ENSSTUG00000015398)	rwdd2b (ENSSTUG00000015396)	cadm2b (ENSSTUG00000015296)	ENSSTUG00000015286	ENSSTUG00000015280
Atlantic salmon	MODERN SPECIES	12	FAM181B (ENSSSAG00000105440)	ENSSSAG00000064595	prcp (ENSSSAG00000106200)	rab30 (ENSSSAG00000064598)	ENSSSAG00000085694	ndufc2 (ENSSSAG00000064607)	guca1c (ENSSSAG00000064617)	ENSSSAG00000087510	ENSSSAG00000099672	ENSSSAG00000082178	MLNR (ENSSSAG00000109806) #19	FNDC3A (ENSSSAG00000063289) #20	CYSLTR2 (ENSSSAG00000115377)	LPAR6 (ENSSSAG00000119904) #24	ENSSSAG00000118500	RCBTB2 (ENSSSAG00000064579) #22	ENSSSAG00000093219	ENSSSAG00000015573	cog6 (ENSSSAG00000120663) #34	foxo1a (ENSSSAG00000118178) #32	SLC25A15 (ENSSSAG00000063192) #30	ENSSSAG00000063202	ENSSSAG00000103121	ENSSSAG00000063213	ENSSSAG00000063218	RWDD2B (ENSSSAG00000082009)	ENSSSAG00000110307	ENSSSAG00000119090	ENSSSAG00000059363	ENSSSAG00000107888	ENSSSAG00000120777
Huchen	MODERN SPECIES	6742																RCBTB2 (ENSHHUG00000001028) #22
Northern pike	MODERN SPECIES		ENSELUG00000023082	ENSELUG00000023068	FAM181B (ENSELUG00000023042)	prcp (ENSELUG00000023022)	rab30 (ENSELUG00000022997)	ndufc2 (ENSELUG00000025514)	ENSELUG00000022914	guca1c (ENSELUG00000022908)	ENSELUG00000022893	ENSELUG00000022889	MLNR (ENSELUG00000022884) #19	FNDC3A (ENSELUG00000022876) #20	ENSELUG00000024777	CYSLTR2 (ENSELUG00000022842)	ENSELUG00000029345	RCBTB2 (ENSELUG00000022833) #22	NEK3 (ENSELUG00000022767)	ENSELUG00000022754	ENSELUG00000022750	ttc36 (ENSELUG00000028517)	FBXO40 (ENSELUG00000022735)	ENSELUG00000022725	NECTIN1 (ENSELUG00000022707)	ENSELUG00000022700	TREH (ENSELUG00000022695)	DDX6 (ENSELUG00000022660)	ENSELUG00000029470	CXCR5 (ENSELUG00000022621)	bcl9l (ENSELUG00000022590)	cdon (ENSELUG00000022556)	ENSELUG00000027240
Acanthomorphata	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Cod	MODERN SPECIES	7	GAB2 (ENSGMOG00000002709)	nars2 (ENSGMOG00000002677)	ENSGMOG00000025730	tenm4 (ENSGMOG00000002593)	FAM181B (ENSGMOG00000028052)	ENSGMOG00000002587	prcp (ENSGMOG00000002562)	rab30 (ENSGMOG00000028654)	ndufc2 (ENSGMOG00000028770)	ENSGMOG00000023619	guca1c (ENSGMOG00000036649)	ENSGMOG00000024878	zgc:153184 (ENSGMOG00000028518)	MLNR (ENSGMOG00000023579) #19	FNDC3A (ENSGMOG00000002435) #20	RCBTB2 (ENSGMOG00000002409) #22	lpar6a (ENSGMOG00000026148) #24	ENSGMOG00000002390 ##35	cog6 (ENSGMOG00000002345) #34	foxo1a (ENSGMOG00000002305) #32	ENSGMOG00000037072	stoml3a (ENSGMOG00000002293)	ENSGMOG00000002269	ENSGMOG00000002244	ENSGMOG00000002225	ENSGMOG00000002187	ENSGMOG00000002155	RWDD2B (ENSGMOG00000023174)	USP16 (ENSGMOG00000002080)	BACH1 (ENSGMOG00000024939)	GRIK1 (ENSGMOG00000002029)
Euacanthomorphacea	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Pinecone sodierfish	MODERN SPECIES	4	ENSMMDG00005015387	GAB2 (ENSMMDG00005015386)	ENSMMDG00005015385	ENSMMDG00005015384	tenm4 (ENSMMDG00005015382)	FAM181B (ENSMMDG00005015380)	ENSMMDG00005015377	prcp (ENSMMDG00005015227)	rab30 (ENSMMDG00005015221)	ndufc2 (ENSMMDG00005015219)	thrsp (ENSMMDG00005015218)	guca1c (ENSMMDG00005015216)	ENSMMDG00005015214	MLNR (ENSMMDG00005015212) #19	FNDC3A (ENSMMDG00005011838) #20	RCBTB2 (ENSMMDG00005011587) #22	lpar6a (ENSMMDG00005011586) #24	NEK3 (ENSMMDG00005011583)	lhfpl6 (ENSMMDG00005011579) ##35	cog6 (ENSMMDG00005011029) #34	foxo1a (ENSMMDG00005010976) #32	SLC25A15 (ENSMMDG00005010972) #30	ENSMMDG00005010937	ENSMMDG00005010912	SLC7A1 (ENSMMDG00005010910)	GBE1 (ENSMMDG00005009208)	cadm2b (ENSMMDG00005009161)	rwdd2b (ENSMMDG00005009157)	usp16 (ENSMMDG00005009152)	bach1a (ENSMMDG00005009147)	GRIK1 (ENSMMDG00005009040)
Percomorphaceae	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Tiger tail seahorse	MODERN SPECIES	352	yap1 (ENSHCOG00000011146)	ENSHCOG00000011129	GAB2 (ENSHCOG00000011119)	nars2 (ENSHCOG00000011107)	tenm4 (ENSHCOG00000011017)	ENSHCOG00000000337	FAM181B (ENSHCOG00000010721)	prcp (ENSHCOG00000010709)	ENSHCOG00000010707	ndufc2 (ENSHCOG00000010686)	guca1c (ENSHCOG00000010504)	ENSHCOG00000010495	zgc:153184 (ENSHCOG00000010492)	MLNR (ENSHCOG00000010487) #19	FNDC3A (ENSHCOG00000010463) #20	RCBTB2 (ENSHCOG00000010412) #22	lpar6a (ENSHCOG00000010375) #24	ENSHCOG00000010366
Percomorphaceae_B	ANCESTRAL SPECIES	13	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Ovalentaria	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Atherinomorphae	ANCESTRAL SPECIES	15	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Cyprinodontiformes	ANCESTRAL SPECIES	12	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Aplocheiloidei	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Mangrove rivulus	MODERN SPECIES	36	ENSKMAG00000003922	yap1 (ENSKMAG00000003932)	ENSKMAG00000003967	GAB2 (ENSKMAG00000003983)	nars2 (ENSKMAG00000004015)	tenm4 (ENSKMAG00000004153)	FAM181B (ENSKMAG00000004379)	prcp (ENSKMAG00000004395)	rab30 (ENSKMAG00000004439)	ndufc2 (ENSKMAG00000004455)	guca1c (ENSKMAG00000004474)	ENSKMAG00000004508	zgc:153184 (ENSKMAG00000004530)	ENSKMAG00000004543 #19	FNDC3A (ENSKMAG00000004585) #20	RCBTB2 (ENSKMAG00000004725) #22	lpar6a (ENSKMAG00000004769) #24	ENSKMAG00000004780	lhfpl6 (ENSKMAG00000004811) ##35	cog6 (ENSKMAG00000004837) #34	foxo1a (ENSKMAG00000004906) #32	SLC25A15 (ENSKMAG00000004927) #30	STOML3 (ENSKMAG00000004959)	ENSKMAG00000004973	ENSKMAG00000004985	ENSKMAG00000005008	SLC7A1 (ENSKMAG00000005071)	GBE1 (ENSKMAG00000005121)	cadm2b (ENSKMAG00000005211)	rwdd2b (ENSKMAG00000005294)	usp16 (ENSKMAG00000005311)
Turquoise killifish	MODERN SPECIES	1615	NARS2 (ENSNFUG00015006694)	tenm4 (ENSNFUG00015006866)	FAM181B (ENSNFUG00015007979)	ENSNFUG00015007980	PRCP (ENSNFUG00015007997)	RAB30 (ENSNFUG00015008048)	NDUFC2 (ENSNFUG00015008057)	thrsp (ENSNFUG00015008063)	guca1c (ENSNFUG00015008069)	ENSNFUG00015008074	ENSNFUG00015008077	RCSD1 (ENSNFUG00015008079)	ENSNFUG00015008083	MLNR (ENSNFUG00015008087) #19	FNDC3A (ENSNFUG00015008158) #20	RCBTB2 (ENSNFUG00015009261) #22	ENSNFUG00015009388	LPAR6A (ENSNFUG00015009394) #24	ENSNFUG00015009400	LHFP (ENSNFUG00015009415) ##35	COG6 (ENSNFUG00015009474) #34	foxo1a (ENSNFUG00015010187) #32	SLC25A15A (ENSNFUG00015010212) #30	STOML3 (ENSNFUG00015010225)	ENSNFUG00015010262	ENSNFUG00015010299	SLC7A1 (ENSNFUG00015010328)	GBE1 (ENSNFUG00015010524)	ENSNFUG00015012823	ENSNFUG00015012825	CADM2B (ENSNFUG00015012853)
Cyprinodontoidei	ANCESTRAL SPECIES	9	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00980000199029	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Poeciliinae	ANCESTRAL SPECIES	14	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00980000199029	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Poecilia	ANCESTRAL SPECIES	2	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00940000154394.b.a.a.a.a.a.b.d	ENSGT00940000154394.b.a.a.a.b.b	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00980000199029	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
NAME_6	ANCESTRAL SPECIES	60	ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.a.a.a.d.a.a.a.b	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00940000154394.b.a.a.a.b.b	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00980000199029	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Sailfin molly	MODERN SPECIES	10										guca1c (ENSPLAG00000011188)	ENSPLAG00000011166	zgc:153184 (ENSPLAG00000011155)	MLNR (ENSPLAG00000011152) #19	FNDC3A (ENSPLAG00000011133) #20	ENSPLAG00000011084	RCBTB2 (ENSPLAG00000011076) #22	lpar6a (ENSPLAG00000011047) #24	ENSPLAG00000011034	lhfpl6 (ENSPLAG00000011030) ##35	cog6 (ENSPLAG00000011012) #34	foxo1a (ENSPLAG00000010939) #32	SLC25A15 (ENSPLAG00000010931) #30	STOML3 (ENSPLAG00000010916)	ENSPLAG00000010892	ENSPLAG00000010875	SLC7A1 (ENSPLAG00000010855)	GBE1 (ENSPLAG00000010820)	cadm2b (ENSPLAG00000010779)	rwdd2b (ENSPLAG00000010751)	usp16 (ENSPLAG00000010734)	bach1a (ENSPLAG00000010719)
Amazon molly	MODERN SPECIES	549		ENSPFOG00000003723	GAB2 (ENSPFOG00000003740)	nars2 (ENSPFOG00000003990)	tenm4 (ENSPFOG00000004202)	FAM181B (ENSPFOG00000020718)	prcp (ENSPFOG00000005291)	rab30 (ENSPFOG00000005479)	ENSPFOG00000005525	ndufc2 (ENSPFOG00000005674)	guca1c (ENSPFOG00000005695)	ENSPFOG00000024574	zgc:153184 (ENSPFOG00000005760)	MLNR (ENSPFOG00000005798) #19	FNDC3A (ENSPFOG00000005812) #20	RCBTB2 (ENSPFOG00000005983) #22	lpar6a (ENSPFOG00000020720) #24	ENSPFOG00000006078	lhfpl6 (ENSPFOG00000006213) ##35	cog6 (ENSPFOG00000006235) #34	foxo1a (ENSPFOG00000006480) #32	SLC25A15 (ENSPFOG00000006523) #30	STOML3 (ENSPFOG00000006627)	ENSPFOG00000006698	SLC7A1 (ENSPFOG00000006745)
Guppy	MODERN SPECIES	443	nars2 (ENSPREG00000014861)	tenm4 (ENSPREG00000014816)	ENSPREG00000014792	FAM181B (ENSPREG00000014781)	prcp (ENSPREG00000014756)	rab30 (ENSPREG00000014634)	ENSPREG00000014621	ENSPREG00000014611	ndufc2 (ENSPREG00000014603)	thrsp (ENSPREG00000014594)	guca1c (ENSPREG00000014583)	ENSPREG00000014578	zgc:153184 (ENSPREG00000014569)	MLNR (ENSPREG00000014556) #19	FNDC3A (ENSPREG00000014454) #20	RCBTB2 (ENSPREG00000014375) #22	lpar6a (ENSPREG00000014361) #24	ENSPREG00000014339	lhfpl6 (ENSPREG00000014323) ##35	cog6 (ENSPREG00000014181) #34	foxo1a (ENSPREG00000014157) #32	SLC25A15 (ENSPREG00000013996) #30	STOML3 (ENSPREG00000013963)	ENSPREG00000013923	SLC7A1 (ENSPREG00000013903)	GBE1 (ENSPREG00000013862)	cadm2b (ENSPREG00000013813)	rwdd2b (ENSPREG00000013801)	usp16 (ENSPREG00000013781)	BACH1 (ENSPREG00000013761)	GRIK1 (ENSPREG00000013680)
Platyfish	MODERN SPECIES	9	GAB2 (ENSXMAG00000015477)	nars2 (ENSXMAG00000015442)	tenm4 (ENSXMAG00000007490)	FAM181B (ENSXMAG00000020233)	prcp (ENSXMAG00000007481)	rab30 (ENSXMAG00000025848)	ENSXMAG00000023047	ENSXMAG00000028264	ndufc2 (ENSXMAG00000023972)	thrsp (ENSXMAG00000020232)	guca1c (ENSXMAG00000007435)	ENSXMAG00000021352	zgc:153184 (ENSXMAG00000029895)	MLNR (ENSXMAG00000028025) #19	FNDC3A (ENSXMAG00000007420) #20	RCBTB2 (ENSXMAG00000007413) #22	lpar6a (ENSXMAG00000020230) #24	ENSXMAG00000007407	lhfpl6 (ENSXMAG00000007405) ##35	cog6 (ENSXMAG00000007388) #34	foxo1a (ENSXMAG00000028449) #32	SLC25A15 (ENSXMAG00000007371) #30	STOML3 (ENSXMAG00000023044)	ENSXMAG00000024457	SLC7A1 (ENSXMAG00000007339)	GBE1 (ENSXMAG00000026965)	cadm2b (ENSXMAG00000007326)	ENSXMAG00000025713	ENSXMAG00000024009	rwdd2b (ENSXMAG00000007320)	usp16 (ENSXMAG00000007314)
NAME_4	ANCESTRAL SPECIES	54	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00980000199029	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a.b	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Mummichog	MODERN SPECIES	2346	ENSFHEG00000014228	GAB2 (ENSFHEG00000014217)	nars2 (ENSFHEG00000014152)	tenm4 (ENSFHEG00000014066)	ENSFHEG00000013988	FAM181B (ENSFHEG00000013980)	prcp (ENSFHEG00000013966)	rab30 (ENSFHEG00000013918)	ndufc2 (ENSFHEG00000013895)	thrsp (ENSFHEG00000013886)	guca1c (ENSFHEG00000013872)	ENSFHEG00000013850	zgc:153184 (ENSFHEG00000013834)	MLNR (ENSFHEG00000013824) #19	FNDC3A (ENSFHEG00000013799) #20	RCBTB2 (ENSFHEG00000013635) #22	lpar6a (ENSFHEG00000013589) #24	ENSFHEG00000013580	lhfpl6 (ENSFHEG00000000813) ##35	cog6 (ENSFHEG00000013552) #34	foxo1a (ENSFHEG00000013504) #32	SLC25A15 (ENSFHEG00000013498) #30	ENSFHEG00000013472	ENSFHEG00000013082	SLC7A1 (ENSFHEG00000013073)	GBE1 (ENSFHEG00000013028)
Sheepshead minnow	MODERN SPECIES	649						FAM181B (ENSCVAG00000018020)	prcp (ENSCVAG00000018060)	rab30 (ENSCVAG00000018085)	ndufc2 (ENSCVAG00000018097)	thrsp (ENSCVAG00000018108)	guca1c (ENSCVAG00000018124)	ENSCVAG00000018139	zgc:153184 (ENSCVAG00000018148)	MLNR (ENSCVAG00000018160) #19	FNDC3A (ENSCVAG00000018204) #20	RCBTB2 (ENSCVAG00000018261) #22	lpar6a (ENSCVAG00000018282) #24	ENSCVAG00000018290	lhfpl6 (ENSCVAG00000018310) ##35	cog6 (ENSCVAG00000018425) #34	foxo1a (ENSCVAG00000018450) #32	SLC25A15 (ENSCVAG00000018483) #30	ENSCVAG00000018506	STOML3 (ENSCVAG00000018530)	ENSCVAG00000018534	SLC7A1 (ENSCVAG00000018577)
Oryzias	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Oryzias_b	ANCESTRAL SPECIES	14	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Javanese ricefish	MODERN SPECIES	4	ENSOJAG00000022864	GAB2 (ENSOJAG00000022852)	nars2 (ENSOJAG00000022831)	tenm4 (ENSOJAG00000022460)	ENSOJAG00000022372	FAM181B (ENSOJAG00000022367)	ENSOJAG00000022352	prcp (ENSOJAG00000022290)	rab30 (ENSOJAG00000022270)	ndufc2 (ENSOJAG00000022267)	thrsp (ENSOJAG00000022264)	guca1c (ENSOJAG00000022257)	ENSOJAG00000022252	zgc:153184 (ENSOJAG00000022247)	FNDC3A (ENSOJAG00000021631) #20	RCBTB2 (ENSOJAG00000021373) #22	ENSOJAG00000021343	ENSOJAG00000021326	lhfpl6 (ENSOJAG00000021310) ##35	cog6 (ENSOJAG00000021171) #34	foxo1a (ENSOJAG00000021143) #32	SLC25A15 (ENSOJAG00000021129) #30	STOML3 (ENSOJAG00000021122)	ENSOJAG00000021113	SLC7A1 (ENSOJAG00000021038)	GBE1 (ENSOJAG00000020604)	cadm2b (ENSOJAG00000020474)	rwdd2b (ENSOJAG00000020452)	usp16 (ENSOJAG00000020383)	ENSOJAG00000020375	GRIK1 (ENSOJAG00000019805)
Indian medaka	MODERN SPECIES	12	ENSOMEG00000001463	GAB2 (ENSOMEG00000001467)	nars2 (ENSOMEG00000001474)	tenm4 (ENSOMEG00000001544)	FAM181B (ENSOMEG00000001592)	ENSOMEG00000001599	prcp (ENSOMEG00000001607)	rab30 (ENSOMEG00000001613)	thrsp (ENSOMEG00000001626)	ndufc2 (ENSOMEG00000001648)	guca1c (ENSOMEG00000001655)	ENSOMEG00000001660	zgc:153184 (ENSOMEG00000001664)	MLNR (ENSOMEG00000001670) #19	FNDC3A (ENSOMEG00000001758) #20	RCBTB2 (ENSOMEG00000001798) #22	lpar6a (ENSOMEG00000001802) #24	ENSOMEG00000001805	ENSOMEG00000001827	lhfpl6 (ENSOMEG00000000015) ##35	cog6 (ENSOMEG00000001848) #34	foxo1a (ENSOMEG00000001855) #32	SLC25A15 (ENSOMEG00000001862) #30	STOML3 (ENSOMEG00000001871)	ENSOMEG00000001876	SLC7A1 (ENSOMEG00000001886)	GBE1 (ENSOMEG00000001902)	cadm2b (ENSOMEG00000000020)	rwdd2b (ENSOMEG00000001942)	usp16 (ENSOMEG00000001972)	bach1a (ENSOMEG00000001994)
Oryzias_a	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Japanese Medaka HdrR	MODERN SPECIES	4	GAB2 (ENSORLG00000002738)	nars2 (ENSORLG00000002778)	tenm4 (ENSORLG00000002811)	ENSORLG00000022763	ENSORLG00000021895	FAM181B (ENSORLG00000002825)	prcp (ENSORLG00000002842)	rab30 (ENSORLG00000029812)	ndufc2 (ENSORLG00000002863)	thrsp (ENSORLG00000002868)	guca1c (ENSORLG00000002874)	ENSORLG00000023029	zgc:153184 (ENSORLG00000024871)	MLNR (ENSORLG00000002888) #19	FNDC3A (ENSORLG00000002976) #20	RCBTB2 (ENSORLG00000003001) #22	lpar6a (ENSORLG00000003013) #24	ENSORLG00000025275	lhfpl6 (ENSORLG00000003019) ##35	cog6 (ENSORLG00000003093) #34	foxo1a (ENSORLG00000023775) #32	SLC25A15 (ENSORLG00000003117) #30	STOML3 (ENSORLG00000022459)	ENSORLG00000003169	SLC7A1 (ENSORLG00000003215)	GBE1 (ENSORLG00000003252)	cadm2b (ENSORLG00000003268)	rwdd2b (ENSORLG00000003293)	usp16 (ENSORLG00000003334)	bach1a (ENSORLG00000003339)	GRIK1 (ENSORLG00000003362)
Chinese medaka	MODERN SPECIES	1047	ENSOSIG00000023910	GAB2 (ENSOSIG00000023907)	nars2 (ENSOSIG00000023905)	tenm4 (ENSOSIG00000023897)	FAM181B (ENSOSIG00000023891)	ENSOSIG00000023888	prcp (ENSOSIG00000023886)	rab30 (ENSOSIG00000023883)	ndufc2 (ENSOSIG00000023882)	thrsp (ENSOSIG00000023881)	guca1c (ENSOSIG00000023878)	ENSOSIG00000023877	zgc:153184 (ENSOSIG00000023875)	MLNR (ENSOSIG00000023874) #19	FNDC3A (ENSOSIG00000023872) #20	RCBTB2 (ENSOSIG00000023857) #22	lpar6a (ENSOSIG00000023844) #24	ENSOSIG00000023843	LHFPL1 (ENSOSIG00000023842) ##35	cog6 (ENSOSIG00000023841) #34	foxo1a (ENSOSIG00000023837) #32	SLC25A15 (ENSOSIG00000023834) #30	STOML3 (ENSOSIG00000023833)	ENSOSIG00000023829	ENSOSIG00000023825	SLC7A1 (ENSOSIG00000023823)	GBE1 (ENSOSIG00000023817)	cadm2b (ENSOSIG00000023809)	rwdd2b (ENSOSIG00000023803)	usp16 (ENSOSIG00000023799)	bach1a (ENSOSIG00000023797)
Ovalentaria_B	ANCESTRAL SPECIES	11	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Pomacentridae	ANCESTRAL SPECIES	27	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Pomacentridae_A	ANCESTRAL SPECIES	32	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Amphiprion	ANCESTRAL SPECIES	30	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000180355	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Orange clownfish	MODERN SPECIES	23	ENSAPEG00000012322	GAB2 (ENSAPEG00000012259)	nars2 (ENSAPEG00000012242)	tenm4 (ENSAPEG00000012129)	FAM181B (ENSAPEG00000012092)	prcp (ENSAPEG00000012050)	rab30 (ENSAPEG00000012044)	thrsp (ENSAPEG00000012027)	ndufc2 (ENSAPEG00000011973)	guca1c (ENSAPEG00000012002)	ENSAPEG00000011958	ENSAPEG00000011937	zgc:153184 (ENSAPEG00000011925)	MLNR (ENSAPEG00000011910) #19	FNDC3A (ENSAPEG00000011747) #20	RCBTB2 (ENSAPEG00000011682) #22	lpar6a (ENSAPEG00000011675) #24	ENSAPEG00000011660	lhfpl6 (ENSAPEG00000011633) ##35	cog6 (ENSAPEG00000011545) #34	foxo1a (ENSAPEG00000011534) #32	SLC25A15 (ENSAPEG00000011499) #30	STOML3 (ENSAPEG00000011467)	ENSAPEG00000011436	SLC7A1 (ENSAPEG00000011418)	GBE1 (ENSAPEG00000011353)	cadm2b (ENSAPEG00000011309)	rwdd2b (ENSAPEG00000011288)	usp16 (ENSAPEG00000011269)	bach1a (ENSAPEG00000011220)	GRIK1 (ENSAPEG00000011113)
Clown anemonefish	MODERN SPECIES	3541	ENSAOCG00000012208	GAB2 (ENSAOCG00000012238)	nars2 (ENSAOCG00000012259)	TENM4 (ENSAOCG00000012424)	FAM181B (ENSAOCG00000012466)	prcp (ENSAOCG00000012520)	rab30 (ENSAOCG00000012556)	ndufc2 (ENSAOCG00000002053)	thrsp (ENSAOCG00000012585)	guca1c (ENSAOCG00000012603)	ENSAOCG00000012621	ENSAOCG00000000775	zgc:153184 (ENSAOCG00000012646)	MLNR (ENSAOCG00000012669) #19	FNDC3A (ENSAOCG00000012723) #20	RCBTB2 (ENSAOCG00000012785) #22	lpar6a (ENSAOCG00000012804) #24	NEK3 (ENSAOCG00000012835)	lhfpl6 (ENSAOCG00000012862) ##35	cog6 (ENSAOCG00000012955) #34	foxo1a (ENSAOCG00000012978) #32	SLC25A15 (ENSAOCG00000012994) #30	STOML3 (ENSAOCG00000013028)	ENSAOCG00000013053	SLC7A1 (ENSAOCG00000013073)
Spiny chromis	MODERN SPECIES	56	GAB2 (ENSAPOG00000023038)	nars2 (ENSAPOG00000022947)	tenm4 (ENSAPOG00000022857)	FAM181B (ENSAPOG00000022653)	prcp (ENSAPOG00000022636)	rab30 (ENSAPOG00000022625)	ndufc2 (ENSAPOG00000022606)	thrsp (ENSAPOG00000022586)	guca1c (ENSAPOG00000022573)	ENSAPOG00000022547	ENSAPOG00000022529	zgc:153184 (ENSAPOG00000022517)	ENSAPOG00000022510	MLNR (ENSAPOG00000022503) #19	FNDC3A (ENSAPOG00000000640) #20	RCBTB2 (ENSAPOG00000022400) #22	lpar6a (ENSAPOG00000022343) #24	ENSAPOG00000022326	lhfpl6 (ENSAPOG00000022311) ##35	cog6 (ENSAPOG00000022287) #34	foxo1a (ENSAPOG00000022194) #32	SLC25A15 (ENSAPOG00000022168) #30
Bicolor damselfish	MODERN SPECIES	902						FAM181B (ENSSPAG00000013384)	prcp (ENSSPAG00000013389)	rab30 (ENSSPAG00000013422)	ndufc2 (ENSSPAG00000013436)	thrsp (ENSSPAG00000013446)	guca1c (ENSSPAG00000013479)	ENSSPAG00000013517	zgc:153184 (ENSSPAG00000013531)	MLNR (ENSSPAG00000013541) #19	FNDC3A (ENSSPAG00000013560) #20	RCBTB2 (ENSSPAG00000013657) #22	lpar6a (ENSSPAG00000013684) #24	ENSSPAG00000013691	lhfpl6 (ENSSPAG00000013713) ##35	cog6 (ENSSPAG00000013737) #34	foxo1a (ENSSPAG00000013824) #32	SLC25A15 (ENSSPAG00000013839) #30
Cichlidae	ANCESTRAL SPECIES	21	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Pseudocrenilabrinae	ANCESTRAL SPECIES	19	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT00940000178507	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	15	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT00940000178507	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013
Haplochromini	ANCESTRAL SPECIES	15	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT00940000178507	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013
Haplochromini_A	ANCESTRAL SPECIES	23	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT00940000178507	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Haplochromini_B	ANCESTRAL SPECIES	27	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Eastern happy	MODERN SPECIES	5	yap1 (ENSACLG00000022912)	ENSACLG00000022929	GAB2 (ENSACLG00000022946)	nars2 (ENSACLG00000023017)	tenm4 (ENSACLG00000023199)	FAM181B (ENSACLG00000023487)	prcp (ENSACLG00000023492)	rab30 (ENSACLG00000023526)	ndufc2 (ENSACLG00000023564)	thrsp (ENSACLG00000023578)	guca1c (ENSACLG00000023584)	ENSACLG00000023603	zgc:153184 (ENSACLG00000023625)	MLNR (ENSACLG00000023691) #19	FNDC3A (ENSACLG00000023703) #20	RCBTB2 (ENSACLG00000023852) #22	lpar6a (ENSACLG00000023889) #24	ENSACLG00000023901	lhfpl6 (ENSACLG00000023931) ##35	cog6 (ENSACLG00000023965) #34	foxo1a (ENSACLG00000024031) #32	SLC25A15 (ENSACLG00000024042) #30	STOML3 (ENSACLG00000024046)	ENSACLG00000024058	ENSACLG00000024347	SLC7A1 (ENSACLG00000024386)	GBE1 (ENSACLG00000024497)	cadm2b (ENSACLG00000024595)	rwdd2b (ENSACLG00000024657)	usp16 (ENSACLG00000024689)	bach1a (ENSACLG00000024722)
Zebra mbuna	MODERN SPECIES	1096	ENSMZEG00005024060	yap1 (ENSMZEG00005024057)	ENSMZEG00005024056	GAB2 (ENSMZEG00005024053)	nars2 (ENSMZEG00005024050)	tenm4 (ENSMZEG00005024046)	FAM181B (ENSMZEG00005024042)	prcp (ENSMZEG00005024037)	rab30 (ENSMZEG00005024032)	ndufc2 (ENSMZEG00005024030)	guca1c (ENSMZEG00005024028)	ENSMZEG00005024024	zgc:153184 (ENSMZEG00005024020)	MLNR (ENSMZEG00005024017) #19	FNDC3A (ENSMZEG00005024011) #20	RCBTB2 (ENSMZEG00005024010) #22	lpar6a (ENSMZEG00005024009) #24	NEK3 (ENSMZEG00005024007)	lhfpl6 (ENSMZEG00005024004) ##35	cog6 (ENSMZEG00005024001) #34	foxo1a (ENSMZEG00005023998) #32	ENSMZEG00005023997	SLC25A15 (ENSMZEG00005023994) #30	ENSMZEG00005023992	SLC7A1 (ENSMZEG00005023990)	GBE1 (ENSMZEG00005023988)	cadm2b (ENSMZEG00005023986)	ENSMZEG00005023984	rwdd2b (ENSMZEG00005023983)	usp16 (ENSMZEG00005023982)	bach1a (ENSMZEG00005023981)
P. nyererei	MODERN SPECIES	361	yap1 (ENSPNYG00000009423)	ENSPNYG00000009440	GAB2 (ENSPNYG00000009460)	nars2 (ENSPNYG00000009495)	tenm4 (ENSPNYG00000009550)	FAM181B (ENSPNYG00000009689)	prcp (ENSPNYG00000009703)	rab30 (ENSPNYG00000009728)	ndufc2 (ENSPNYG00000009751)	thrsp (ENSPNYG00000009765)	guca1c (ENSPNYG00000009782)	ENSPNYG00000009823	zgc:153184 (ENSPNYG00000009844)	MLNR (ENSPNYG00000009856) #19	FNDC3A (ENSPNYG00000009890) #20	RCBTB2 (ENSPNYG00000009963) #22	lpar6a (ENSPNYG00000009993) #24	NEK3 (ENSPNYG00000010007)	lhfpl6 (ENSPNYG00000010042) ##35	cog6 (ENSPNYG00000010079) #34	foxo1a (ENSPNYG00000010144) #32	SLC7A1 (ENSPNYG00000010159)	GBE1 (ENSPNYG00000010188)	cadm2b (ENSPNYG00000010214)	rwdd2b (ENSPNYG00000010247)	usp16 (ENSPNYG00000010270)	bach1a (ENSPNYG00000010348)	GRIK1 (ENSPNYG00000010358)	cldn8.3 (ENSPNYG00000010401)	CLDN8 (ENSPNYG00000010419)	ENSPNYG00000010442
Burton s mouthbrooder	MODERN SPECIES	348	ENSHBUG00000001428	yap1 (ENSHBUG00000001431)	ENSHBUG00000001436	GAB2 (ENSHBUG00000001442)	nars2 (ENSHBUG00000001449)	tenm4 (ENSHBUG00000001502)	FAM181B (ENSHBUG00000001528)	prcp (ENSHBUG00000001535)	rab30 (ENSHBUG00000000993)	ndufc2 (ENSHBUG00000001550)	guca1c (ENSHBUG00000001558)	ENSHBUG00000001561	ENSHBUG00000001565	MLNR (ENSHBUG00000001572) #19	FNDC3A (ENSHBUG00000001607) #20	RCBTB2 (ENSHBUG00000001634) #22	lpar6a (ENSHBUG00000001635) #24	ENSHBUG00000001640	lhfpl6 (ENSHBUG00000001649) ##35	cog6 (ENSHBUG00000001669) #34	foxo1a (ENSHBUG00000001682) #32	SLC25A15 (ENSHBUG00000001688) #30	ENSHBUG00000001691	STOML3 (ENSHBUG00000001696)	ENSHBUG00000001700	ENSHBUG00000001710	SLC7A1 (ENSHBUG00000001726)	GBE1 (ENSHBUG00000001742)	cadm2b (ENSHBUG00000001765)	rwdd2b (ENSHBUG00000001772)	usp16 (ENSHBUG00000001777)
Lyretail cichlid	MODERN SPECIES	335	yap1 (ENSNBRG00000002371)	ENSNBRG00000002348	ENSNBRG00000002327	ENSNBRG00000002312	nars2 (ENSNBRG00000002261)	tenm4 (ENSNBRG00000002145)	FAM181B (ENSNBRG00000002127)	prcp (ENSNBRG00000002097)	rab30 (ENSNBRG00000002082)	ndufc2 (ENSNBRG00000002064)	guca1c (ENSNBRG00000002052)	ENSNBRG00000002035	ENSNBRG00000002024	MLNR (ENSNBRG00000001998) #19	FNDC3A (ENSNBRG00000001869) #20	RCBTB2 (ENSNBRG00000001800) #22	lpar6a (ENSNBRG00000001776) #24	NEK3 (ENSNBRG00000001766)	lhfpl6 (ENSNBRG00000001732) ##35	cog6 (ENSNBRG00000001671) #34	foxo1a (ENSNBRG00000001658) #32	SLC25A15 (ENSNBRG00000001640) #30	ENSNBRG00000001628	STOML3 (ENSNBRG00000001615)	ENSNBRG00000001611	SLC7A1 (ENSNBRG00000001603)	GBE1 (ENSNBRG00000001600)	cadm2b (ENSNBRG00000001566)	ENSNBRG00000001553	rwdd2b (ENSNBRG00000001546)	ENSNBRG00000001516
Nile tilapia	MODERN SPECIES	5	ENSONIG00000035687	yap1 (ENSONIG00000005729)	ENSONIG00000005727	GAB2 (ENSONIG00000005723)	nars2 (ENSONIG00000005718)	tenm4 (ENSONIG00000005714)	prcp (ENSONIG00000005709)	rab30 (ENSONIG00000005708)	ndufc2 (ENSONIG00000036233)	thrsp (ENSONIG00000005704)	guca1c (ENSONIG00000005702)	ENSONIG00000037374	zgc:153184 (ENSONIG00000029795)	MLNR (ENSONIG00000005699) #19	FNDC3A (ENSONIG00000005695) #20	RCBTB2 (ENSONIG00000005688) #22	lpar6a (ENSONIG00000021407) #24	NEK3 (ENSONIG00000034039)	lhfpl6 (ENSONIG00000005686) ##35	cog6 (ENSONIG00000005680) #34	ENSONIG00000039423	foxo1a (ENSONIG00000005674) #32	SLC25A15 (ENSONIG00000033095) #30	ENSONIG00000027537	STOML3 (ENSONIG00000005670)	ENSONIG00000038727	GBE1 (ENSONIG00000005648)	cadm2b (ENSONIG00000005644)	rwdd2b (ENSONIG00000005643)	usp16 (ENSONIG00000005639)	bach1a (ENSONIG00000005635)
Percomorphaceae_C	ANCESTRAL SPECIES	9	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Zig-zag eel	MODERN SPECIES	4	ENSMAMG00000012307	ENSMAMG00000012301	GAB2 (ENSMAMG00000012254)	nars2 (ENSMAMG00000012198)	tenm4 (ENSMAMG00000012064)	FAM181B (ENSMAMG00000012027)	prcp (ENSMAMG00000011981)	rab30 (ENSMAMG00000011973)	ndufc2 (ENSMAMG00000027855)	ENSMAMG00000011963	guca1c (ENSMAMG00000011926)	ENSMAMG00000011916	zgc:153184 (ENSMAMG00000011890)	MLNR (ENSMAMG00000011877) #19	FNDC3A (ENSMAMG00000011791) #20	RCBTB2 (ENSMAMG00000011758) #22	LPAR6 (ENSMAMG00000011750) #24	ENSMAMG00000011676	ENSMAMG00000011667 ##35	cog6 (ENSMAMG00000011639) #34	ENSMAMG00000011632	ENSMAMG00000011616 #32	ENSMAMG00000011612	ENSMAMG00000011579	ENSMAMG00000011557	ENSMAMG00000011509	ENSMAMG00000011493	RWDD2B (ENSMAMG00000011488)	USP16 (ENSMAMG00000011480)	BACH1 (ENSMAMG00000011467)	GRIK1 (ENSMAMG00000011438)
Anabantoidei	ANCESTRAL SPECIES	14	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Climbing perch	MODERN SPECIES	4	GAB2 (ENSATEG00000010185)	nars2 (ENSATEG00000010262)	tenm4 (ENSATEG00000010290)	ENSATEG00000010371	FAM181B (ENSATEG00000010380)	prcp (ENSATEG00000010399)	rab30 (ENSATEG00000026571)	ndufc2 (ENSATEG00000030159)	ENSATEG00000010494	guca1c (ENSATEG00000010507)	ENSATEG00000026336	ENSATEG00000025474	zgc:153184 (ENSATEG00000010539)	MLNR (ENSATEG00000010550) #19	FNDC3A (ENSATEG00000010572) #20	RCBTB2 (ENSATEG00000010739) #22	LPAR6 (ENSATEG00000010803) #24	ENSATEG00000010814	ENSATEG00000010836 ##35	cog6 (ENSATEG00000010884) #34	ENSATEG00000029567 #32	SLC25A15 (ENSATEG00000011053) #30	ENSATEG00000028668	ENSATEG00000027959	ENSATEG00000011099	ENSATEG00000011144	ENSATEG00000011187	ENSATEG00000011207	RWDD2B (ENSATEG00000011446)	USP16 (ENSATEG00000011479)	BACH1 (ENSATEG00000011502)
Siamese fighting fish	MODERN SPECIES	4	ENSBSLG00000026069	GAB2 (ENSBSLG00000025993)	nars2 (ENSBSLG00000025913)	tenm4 (ENSBSLG00000020051)	ENSBSLG00000016663	FAM181B (ENSBSLG00000015877)	prcp (ENSBSLG00000015543)	rab30 (ENSBSLG00000015295)	ndufc2 (ENSBSLG00000015213)	thrsp (ENSBSLG00000015010)	guca1c (ENSBSLG00000014991)	ENSBSLG00000014971	zgc:153184 (ENSBSLG00000014948)	MLNR (ENSBSLG00000014936) #19	FNDC3A (ENSBSLG00000007658) #20	RCBTB2 (ENSBSLG00000004239) #22	lpar6a (ENSBSLG00000004217) #24	ENSBSLG00000023080	lhfpl6 (ENSBSLG00000023068) ##35	cog6 (ENSBSLG00000022859) #34	foxo1a (ENSBSLG00000022606) #32	SLC25A15 (ENSBSLG00000022602) #30	STOML3 (ENSBSLG00000022570)	STOML3 (ENSBSLG00000022438)	ENSBSLG00000022345	ENSBSLG00000022156	GBE1 (ENSBSLG00000021689)	cadm2b (ENSBSLG00000021575)	rwdd2b (ENSBSLG00000021558)	usp16 (ENSBSLG00000021494)	GRIK1 (ENSBSLG00000021185)
Carangaria	ANCESTRAL SPECIES	8	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Pleuronectoidei	ANCESTRAL SPECIES	35	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Tongue sole	MODERN SPECIES	14	APBB1 (ENSCSEG00000007371)	ilk (ENSCSEG00000007356)	ENSCSEG00000007330	ENSCSEG00000007321	ENSCSEG00000007317	diabloa (ENSCSEG00000007308)	rab30 (ENSCSEG00000007292)	thrsp (ENSCSEG00000007287)	ndufc2 (ENSCSEG00000007278)	thrsp (ENSCSEG00000007274)	guca1c (ENSCSEG00000007269)	ENSCSEG00000007261	zgc:153184 (ENSCSEG00000007248)	MLNR (ENSCSEG00000007241) #19	FNDC3A (ENSCSEG00000007076) #20	RCBTB2 (ENSCSEG00000007002) #22	lpar6a (ENSCSEG00000006995) #24	ENSCSEG00000006988	lhfpl6 (ENSCSEG00000006985) ##35	cog6 (ENSCSEG00000006936) #34	robo2 (ENSCSEG00000007760)	ENSCSEG00000007708	stim1a (ENSCSEG00000007586)	PGAP2 (ENSCSEG00000007573)	CHRNA10 (ENSCSEG00000007568)	or71aq1 (ENSCSEG00000007559)	ENSCSEG00000007549	ENSCSEG00000007534	or15.37 (ENSCSEG00000007526)	or30bt5 (ENSCSEG00000007522)	ENSCSEG00000007503
Turbot	MODERN SPECIES	15	ENSSMAG00000001801	ENSSMAG00000001815	GAB2 (ENSSMAG00000001853)	nars2 (ENSSMAG00000001927)	tenm4 (ENSSMAG00000002017)	FAM181B (ENSSMAG00000002451)	prcp (ENSSMAG00000002457)	rab30 (ENSSMAG00000002500)	ndufc2 (ENSSMAG00000002527)	ENSSMAG00000002606	guca1c (ENSSMAG00000002616)	ENSSMAG00000034995	zgc:153184 (ENSSMAG00000031718)	MLNR (ENSSMAG00000002647) #19	FNDC3A (ENSSMAG00000002677) #20	RCBTB2 (ENSSMAG00000002851) #22	LPAR6 (ENSSMAG00000002872) #24	ENSSMAG00000002881	ENSSMAG00000002941 ##35	cog6 (ENSSMAG00000002949) #34	ENSSMAG00000033089 #32	SLC25A15 (ENSSMAG00000003127) #30	ENSSMAG00000003154	ENSSMAG00000031030	ENSSMAG00000022089	ENSSMAG00000003238	ENSSMAG00000003282	ENSSMAG00000003345	ENSSMAG00000003461	RWDD2B (ENSSMAG00000003497)	USP16 (ENSSMAG00000003510)
Carangaria_A	ANCESTRAL SPECIES	10	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Seriola	ANCESTRAL SPECIES	65	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Yellowtail amberjack	MODERN SPECIES	2716	ENSSLDG00000022956	GAB2 (ENSSLDG00000022946)	nars2 (ENSSLDG00000022896)	tenm4 (ENSSLDG00000022614)	FAM181B (ENSSLDG00000022570)	ENSSLDG00000022557	prcp (ENSSLDG00000022544)	rab30 (ENSSLDG00000022533)	ndufc2 (ENSSLDG00000022527)	thrsp (ENSSLDG00000022512)	guca1c (ENSSLDG00000022501)	ENSSLDG00000022482	zgc:153184 (ENSSLDG00000022463)	MLNR (ENSSLDG00000022451) #19	FNDC3A (ENSSLDG00000022318) #20	RCBTB2 (ENSSLDG00000022272) #22	lpar6a (ENSSLDG00000022271) #24	ENSSLDG00000022263	lhfpl6 (ENSSLDG00000022235) ##35	cog6 (ENSSLDG00000022180) #34	foxo1a (ENSSLDG00000022166) #32	SLC25A15 (ENSSLDG00000022160) #30
Greater amberjack	MODERN SPECIES	59		ENSSDUG00000013519	GAB2 (ENSSDUG00000013499)	nars2 (ENSSDUG00000013432)	tenm4 (ENSSDUG00000013368)	FAM181B (ENSSDUG00000013352)	prcp (ENSSDUG00000013337)	rab30 (ENSSDUG00000013325)	ndufc2 (ENSSDUG00000013314)	thrsp (ENSSDUG00000013306)	guca1c (ENSSDUG00000013299)	ENSSDUG00000013267	zgc:153184 (ENSSDUG00000013250)	MLNR (ENSSDUG00000013235) #19	FNDC3A (ENSSDUG00000013122) #20	RCBTB2 (ENSSDUG00000013073) #22	lpar6a (ENSSDUG00000013056) #24	ENSSDUG00000013013	LHFPL1 (ENSSDUG00000012987) ##35	cog6 (ENSSDUG00000012898) #34	foxo1a (ENSSDUG00000012885) #32	SLC25A15 (ENSSDUG00000012865) #30	STOML3 (ENSSDUG00000012848)	ENSSDUG00000012834	SLC7A1 (ENSSDUG00000012793)	GBE1 (ENSSDUG00000012726)	cadm2b (ENSSDUG00000012673)	rwdd2b (ENSSDUG00000012650)	usp16 (ENSSDUG00000012622)	bach1a (ENSSDUG00000012597)	GRIK1 (ENSSDUG00000012563)
Barramundi perch	MODERN SPECIES	109	yap1 (ENSLCAG00010004848)	ENSLCAG00010004841	GAB2 (ENSLCAG00010004838)	nars2 (ENSLCAG00010004833)	tenm4 (ENSLCAG00010004261)	FAM181B (ENSLCAG00010004137)	prcp (ENSLCAG00010004065)	rab30 (ENSLCAG00010004049)	ndufc2 (ENSLCAG00010004048)	thrsp (ENSLCAG00010004046)	guca1c (ENSLCAG00010004044)	ENSLCAG00010004043	zgc:153184 (ENSLCAG00010004037)	MLNR (ENSLCAG00010004032) #19	FNDC3A (ENSLCAG00010003950) #20	RCBTB2 (ENSLCAG00010003813) #22	lpar6a (ENSLCAG00010003781) #24	ENSLCAG00010003776	lhfpl6 (ENSLCAG00010003770) ##35	cog6 (ENSLCAG00010003743) #34	foxo1a (ENSLCAG00010003713) #32	SLC25A15 (ENSLCAG00010003710) #30	STOML3 (ENSLCAG00010003709)	ENSLCAG00010003703	SLC7A1 (ENSLCAG00010003697)	GBE1 (ENSLCAG00010003676)
Eupercaria	ANCESTRAL SPECIES	7	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Tetraodontidae	ANCESTRAL SPECIES	10	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b	ENSGT00940000159077.j
Tetraodon	MODERN SPECIES	8	DDX6 (ENSTNIG00000016295)	TREH (ENSTNIG00000016296)	NECTIN1 (ENSTNIG00000016297)	ttc36 (ENSTNIG00000019049)	FBXO40 (ENSTNIG00000019048)	cntn5 (ENSTNIG00000019047)	ARHGAP42 (ENSTNIG00000019046)	pgr (ENSTNIG00000019045)	trpc6a (ENSTNIG00000019044)	yap1 (ENSTNIG00000019043)	GAB2 (ENSTNIG00000019042)	nars2 (ENSTNIG00000019041)	tenm4 (ENSTNIG00000019040)	MLNR (ENSTNIG00000019039) #19	FNDC3A (ENSTNIG00000019038) #20	RCBTB2 (ENSTNIG00000019037) #22	lpar6a (ENSTNIG00000019036) #24	ENSTNIG00000019035	lhfpl6 (ENSTNIG00000019034) ##35	cog6 (ENSTNIG00000019033) #34	foxo1a (ENSTNIG00000019032) #32	STOML3 (ENSTNIG00000019031)	ENSTNIG00000019030	SLC7A1 (ENSTNIG00000019029)	GBE1 (ENSTNIG00000019028)	cadm2b (ENSTNIG00000019027)	rwdd2b (ENSTNIG00000019026)	usp16 (ENSTNIG00000019025)	bach1a (ENSTNIG00000019024)	GRIK1 (ENSTNIG00000019023)	cldn8.3 (ENSTNIG00000019022)
Fugu	MODERN SPECIES	2	yap1 (ENSTRUG00000020886)	ENSTRUG00000019759	GAB2 (ENSTRUG00000013479)	nars2 (ENSTRUG00000013557)	tenm4 (ENSTRUG00000013623)	FAM181B (ENSTRUG00000013809)	prcp (ENSTRUG00000013812)	rab30 (ENSTRUG00000022559)	ndufc2 (ENSTRUG00000029464)	thrsp (ENSTRUG00000013902)	guca1c (ENSTRUG00000013910)	ENSTRUG00000025778	zgc:153184 (ENSTRUG00000025197)	MLNR (ENSTRUG00000013958) #19	FNDC3A (ENSTRUG00000013982) #20	RCBTB2 (ENSTRUG00000014127) #22	lpar6a (ENSTRUG00000014206) #24	ENSTRUG00000014218	lhfpl6 (ENSTRUG00000014306) ##35	cog6 (ENSTRUG00000014316) #34	foxo1a (ENSTRUG00000014453) #32	ENSTRUG00000014503	ENSTRUG00000014536	ENSTRUG00000014559	GBE1 (ENSTRUG00000014640)	cadm2b (ENSTRUG00000014715)	rwdd2b (ENSTRUG00000014841)	usp16 (ENSTRUG00000014855)	ENSTRUG00000030732	GRIK1 (ENSTRUG00000014961)	cldn8.3 (ENSTRUG00000015027)
Eupecaria_A	ANCESTRAL SPECIES	9	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Ballan wrasse	MODERN SPECIES	254													stim1a (ENSLBEG00000027836)	MLNR (ENSLBEG00000027830) #19	FNDC3A (ENSLBEG00000027810) #20	RCBTB2 (ENSLBEG00000027791) #22	lpar6a (ENSLBEG00000027782) #24	NEK3 (ENSLBEG00000027773)	LHFPL1 (ENSLBEG00000027753) ##35	cog6 (ENSLBEG00000027736) #34	foxo1a (ENSLBEG00000027722) #32	SLC25A15 (ENSLBEG00000027712) #30	ENSLBEG00000027706	STOML3 (ENSLBEG00000027697)	ENSLBEG00000027678	SLC7A1 (ENSLBEG00000027656)	GBE1 (ENSLBEG00000027604)	cadm2b (ENSLBEG00000027534)	rwdd2b (ENSLBEG00000027499)	usp16 (ENSLBEG00000027442)	bach1a (ENSLBEG00000027422)
Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Perciformes	ANCESTRAL SPECIES	10	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b
Pike perch	MODERN SPECIES	14	ENSSLUG00000000883	yap1 (ENSSLUG00000000871)	ENSSLUG00000000865	GAB2 (ENSSLUG00000000859)	nars2 (ENSSLUG00000000838)	tenm4 (ENSSLUG00000000821)	prcp (ENSSLUG00000000781)	rab30 (ENSSLUG00000000760)	ndufc2 (ENSSLUG00000000755)	thrsp (ENSSLUG00000000753)	guca1c (ENSSLUG00000000748)	ENSSLUG00000000747	zgc:153184 (ENSSLUG00000000744)	MLNR (ENSSLUG00000000740) #19	FNDC3A (ENSSLUG00000000326) #20	RCBTB2 (ENSSLUG00000000151) #22	lpar6a (ENSSLUG00000000139) #24	ENSSLUG00000000132	ENSSLUG00000020826	lhfpl6 (ENSSLUG00000020824) ##35	cog6 (ENSSLUG00000020806) #34	foxo1a (ENSSLUG00000020793) #32	SLC25A15 (ENSSLUG00000020790) #30	ENSSLUG00000020625	ENSSLUG00000020603	ENSSLUG00000020253	ENSSLUG00000020233	GBE1 (ENSSLUG00000020191)	cadm2b (ENSSLUG00000020182)	rwdd2b (ENSSLUG00000020179)	usp16 (ENSSLUG00000020166)
Channel bull blenny	MODERN SPECIES	4	yap1 (ENSCGOG00000005063)	ENSCGOG00000005049	GAB2 (ENSCGOG00000005045)	nars2 (ENSCGOG00000004930)	tenm4 (ENSCGOG00000001892)	FAM181B (ENSCGOG00000001771)	prcp (ENSCGOG00000001646)	rab30 (ENSCGOG00000001600)	thrsp (ENSCGOG00000022784)	ndufc2 (ENSCGOG00000022782)	guca1c (ENSCGOG00000022779)	ENSCGOG00000022778	zgc:153184 (ENSCGOG00000022777)	MLNR (ENSCGOG00000022776) #19	FNDC3A (ENSCGOG00000022139) #20	RCBTB2 (ENSCGOG00000022025) #22	lpar6a (ENSCGOG00000022022) #24	ENSCGOG00000022008	lhfpl6 (ENSCGOG00000021999) ##35	cog6 (ENSCGOG00000021953) #34	ENSCGOG00000021945	foxo1a (ENSCGOG00000021939) #32	SLC25A15 (ENSCGOG00000021935) #30	STOML3 (ENSCGOG00000021932)	ENSCGOG00000021931	SLC7A1 (ENSCGOG00000021771)	GBE1 (ENSCGOG00000021675)	cadm2b (ENSCGOG00000021527)	rwdd2b (ENSCGOG00000021524)	usp16 (ENSCGOG00000021513)	bach1a (ENSCGOG00000021512)
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f	ENSGT00940000156253.a.b	ENSGT00940000159077.j
Lumpfish	MODERN SPECIES	4	yap1 (ENSCLMG00005018447)	ENSCLMG00005018445	GAB2 (ENSCLMG00005018444)	nars2 (ENSCLMG00005018436)	tenm4 (ENSCLMG00005018435)	FAM181B (ENSCLMG00005018434)	prcp (ENSCLMG00005018428)	rab30 (ENSCLMG00005018426)	ndufc2 (ENSCLMG00005018425)	thrsp (ENSCLMG00005018424)	guca1c (ENSCLMG00005018423)	ENSCLMG00005018421	zgc:153184 (ENSCLMG00005018419)	MLNR (ENSCLMG00005018418) #19	FNDC3A (ENSCLMG00005017565) #20	RCBTB2 (ENSCLMG00005017515) #22	lpar6a (ENSCLMG00005017513) #24	ENSCLMG00005017512	lhfpl6 (ENSCLMG00005017511) ##35	cog6 (ENSCLMG00005016898) #34	foxo1a (ENSCLMG00005016876) #32	STOML3 (ENSCLMG00005016873)	ENSCLMG00005016804	SLC7A1 (ENSCLMG00005016634)	GBE1 (ENSCLMG00005015511)	cadm2b (ENSCLMG00005015501)	rwdd2b (ENSCLMG00005015499)	usp16 (ENSCLMG00005015494)	ENSCLMG00005015493	GRIK1 (ENSCLMG00005015457)	cldn8.3 (ENSCLMG00005015450)
Stickleback	MODERN SPECIES		ENSGACG00000012148	yap1 (ENSGACG00000012139)	ENSGACG00000012128	GAB2 (ENSGACG00000012121)	nars2 (ENSGACG00000012085)	tenm4 (ENSGACG00000012069)	FAM181B (ENSGACG00000012067)	prcp (ENSGACG00000012026)	rab30 (ENSGACG00000012006)	thrsp (ENSGACG00000012003)	guca1c (ENSGACG00000011982)	ENSGACG00000011980	ENSGACG00000011976	ENSGACG00000011973 #19	FNDC3A (ENSGACG00000011959) #20	RCBTB2 (ENSGACG00000011950) #22	lpar6a (ENSGACG00000011947) #24	ENSGACG00000011936	lhfpl6 (ENSGACG00000011929) ##35	cog6 (ENSGACG00000011922) #34	foxo1a (ENSGACG00000011918) #32	STOML3 (ENSGACG00000011911)	ENSGACG00000011908	SLC7A1 (ENSGACG00000011861)	GBE1 (ENSGACG00000011821)	cadm2b (ENSGACG00000011816)	rwdd2b (ENSGACG00000011812)	usp16 (ENSGACG00000011804)	bach1a (ENSGACG00000011798)	GRIK1 (ENSGACG00000011755)	cldn8.3 (ENSGACG00000011753)
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00390000013786	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000158923.f
Gilthead seabream	MODERN SPECIES	11	trpc6a (ENSSAUG00010023157)	ENSSAUG00010023191	yap1 (ENSSAUG00010023192)	ENSSAUG00010023193	GAB2 (ENSSAUG00010023194)	nars2 (ENSSAUG00010023198)	tenm4 (ENSSAUG00010023225)	prcp (ENSSAUG00010000134)	rab30 (ENSSAUG00010000172)	NDUFC2 (ENSSAUG00010000182)	guca1c (ENSSAUG00010000186)	ENSSAUG00010000198	zgc:153184 (ENSSAUG00010000204)	MLNR (ENSSAUG00010000210) #19	FNDC3A (ENSSAUG00010000525) #20	RCBTB2 (ENSSAUG00010005698) #22	lpar6a (ENSSAUG00010005773) #24	NEK3 (ENSSAUG00010005775)	lhfpl6 (ENSSAUG00010005777) ##35	cog6 (ENSSAUG00010005785) #34	foxo1a (ENSSAUG00010006340) #32	SLC25A15 (ENSSAUG00010006342) #30	STOML3 (ENSSAUG00010006345)	ENSSAUG00010006348	ENSSAUG00010006352	SLC7A1 (ENSSAUG00010006371)	GBE1 (ENSSAUG00010006704)	cadm2b (ENSSAUG00010009418)	rwdd2b (ENSSAUG00010009421)	usp16 (ENSSAUG00010009423)	bach1a (ENSSAUG00010009424)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT00390000013786	ENSGT00510000046760.a.ab	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00940000168248	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040	ENSGT00940000155947.a	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00940000156253.a.b
European seabass	MODERN SPECIES	3	pgr (ENSDLAG00005025654)	TRPC6 (ENSDLAG00005025640)	ENSDLAG00005025618	ENSDLAG00005025614	ENSDLAG00005025613	GAB2 (ENSDLAG00005025608)	nars2 (ENSDLAG00005025603)	tenm4 (ENSDLAG00005025323)	prcp (ENSDLAG00005025207)	ndufc2 (ENSDLAG00005028681)	rab30 (ENSDLAG00005034228)	ENSDLAG00005031427	zgc:153184 (ENSDLAG00005027030)	MLNR (ENSDLAG00005025176) #19	FNDC3A (ENSDLAG00005024336) #20	RCBTB2 (ENSDLAG00005024207) #22	LPAR6 (ENSDLAG00005024198) #24	ENSDLAG00005024184	ENSDLAG00005024181 ##35	foxo1a (ENSDLAG00005024010) #32	cog6 (ENSDLAG00005024021) #34	ENSDLAG00005034109	ENSDLAG00005023978	ENSDLAG00005032840	ENSDLAG00005023921	ENSDLAG00005023831	ENSDLAG00005023740	ENSDLAG00005023730	ENSDLAG00005023716	GRIK1 (ENSDLAG00005023538)	cldn8.3 (ENSDLAG00005023511)
Large yellow croaker	MODERN SPECIES	479	ZPLD1 (ENSLCRG00005016795)	ENSLCRG00005016797	alcamb (ENSLCRG00005016799)	dyrk1ab (ENSLCRG00005016805)	thap12b (ENSLCRG00005016877)	ENSLCRG00005016878	rab30 (ENSLCRG00005016879)	ndufc2 (ENSLCRG00005016881)	thrsp (ENSLCRG00005016883)	guca1c (ENSLCRG00005016884)	ENSLCRG00005016887	zgc:153184 (ENSLCRG00005016889)	MLNR (ENSLCRG00005016891) #19	ENSLCRG00005016893	FNDC3A (ENSLCRG00005016916) #20	RCBTB2 (ENSLCRG00005019140) #22	lpar6a (ENSLCRG00005019141) #24	ENSLCRG00005019143	lhfpl6 (ENSLCRG00005019145) ##35	cog6 (ENSLCRG00005019154) #34	foxo1a (ENSLCRG00005019159) #32	SLC25A15 (ENSLCRG00005019161) #30	STOML3 (ENSLCRG00005019185)	ENSLCRG00005019529	ENSLCRG00005019530	SLC7A1 (ENSLCRG00005019532)	GBE1 (ENSLCRG00005019587)	cadm2b (ENSLCRG00005019810)	rwdd2b (ENSLCRG00005019814)	usp16 (ENSLCRG00005019816)	GRIK1 (ENSLCRG00005019835)
Otomorpha	ANCESTRAL SPECIES	2	ENSGT01030000234618.D	ENSGT00990000210146	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00990000205057	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B.a.a #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.b #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040.n	ENSGT00940000155947.a	ENSGT00940000167916	ENSGT00940000158923.f	ENSGT00940000156013	ENSGT00390000007224.b
Otophysi	ANCESTRAL SPECIES	69	ENSGT01030000234618.D	ENSGT00990000210146	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00990000205057	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B.a.a #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.b #30	ENSGT01100000263624.e	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040.n	ENSGT00940000155947.a	ENSGT00940000167916	ENSGT00940000158923.f	ENSGT00940000154678.a.b	ENSGT01030000235187
Characiphysae	ANCESTRAL SPECIES	39	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00990000205057	ENSGT00940000153997.b.a.b.c.a	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a.a	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.b #30	ENSGT01100000263624.e	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040.n	ENSGT00940000155947.a	ENSGT00940000167916	ENSGT00940000158923.f	ENSGT00980000198612	ENSGT00950000183171.B
Channel catfish	MODERN SPECIES	8	nars2 (ENSIPUG00000020892)	ENSIPUG00000020911	tenm4 (ENSIPUG00000020918)	ENSIPUG00000020955	ENSIPUG00000020962	FAM181B (ENSIPUG00000020971)	PRCP (ENSIPUG00000020979)	Rab30 (ENSIPUG00000021010)	ndufc2 (ENSIPUG00000021028)	thrsp (ENSIPUG00000021040)	guca1c (ENSIPUG00000021049)	ENSIPUG00000021056	zgc:153184 (ENSIPUG00000021065)	FNDC3A (ENSIPUG00000021075) #20	CYSLTR2 (ENSIPUG00000021125)	rcbtb2 (ENSIPUG00000021133) #22	lpar6a (ENSIPUG00000021159) #24	nek3 (ENSIPUG00000021161)	lhfp (ENSIPUG00000021171) ##35	cog6 (ENSIPUG00000021174) #34	foxo1a (ENSIPUG00000021213) #32	slc25a15a (ENSIPUG00000021236) #30	stoml3a (ENSIPUG00000021292)	ENSIPUG00000021313	ENSIPUG00000021321	SLC7A1 (ENSIPUG00000021333)	gbe1 (ENSIPUG00000021373)	cadm2 (ENSIPUG00000021420)	ENSIPUG00000021450	ENSIPUG00000021461	ENSIPUG00000021466
Characiphysae_b	ANCESTRAL SPECIES	38	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00990000205057	ENSGT00940000153997.b.a.b.c.a	ENSGT00940000159319 #20	ENSGT01100000263536.B.c.a.a	ENSGT00990000203619.B.a.a #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.b #30	ENSGT01100000263624.e	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040.n	ENSGT00940000155947.a	ENSGT00940000167916	ENSGT00940000158923.f	ENSGT00390000017365.b.mc	ENSGT00950000183171.B
Characoidei	ANCESTRAL SPECIES	53	ENSGT00940000162644	ENSGT00950000183201.b.b.a	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00990000205057	ENSGT00940000153997.b.a.b.c.a	ENSGT00940000159319 #20	ENSGT00990000203619.B.a.a #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.b #30	ENSGT01100000263624.e	ENSGT00950000183026.B.c.a	ENSGT00940000155349.c	ENSGT00390000017040.n	ENSGT00940000155947.a	ENSGT00940000158923.f	ENSGT00390000017365.b.mc	ENSGT00950000183171.B	ENSGT00940000153259.a.a.b
Mexicana tetra	MODERN SPECIES	18	ENSAMXG00000037591	ENSAMXG00000033138	tmem132e (ENSAMXG00000007488)	ENSAMXG00000029351	ENSAMXG00000038139	lig3 (ENSAMXG00000007489)	rad51d (ENSAMXG00000007491)	tmem248 (ENSAMXG00000037321)	ENSAMXG00000031572	ndufc2 (ENSAMXG00000029569)	thrsp (ENSAMXG00000025561)	guca1c (ENSAMXG00000041918)	zgc:153184 (ENSAMXG00000039239)	FNDC3A (ENSAMXG00000009916) #20	ENSAMXG00000025560 #21	RCBTB2 (ENSAMXG00000044125) #22	lpar6a (ENSAMXG00000025558) #24	ENSAMXG00000009911	LHFPL1 (ENSAMXG00000031038) ##35	ENSAMXG00000032042	cog6 (ENSAMXG00000009896) #34	foxo1a (ENSAMXG00000037494) #32	slc25a15a (ENSAMXG00000035361) #30	stoml3a (ENSAMXG00000009863)	ENSAMXG00000032304	ENSAMXG00000043040	ENSAMXG00000036364	steap4 (ENSAMXG00000011009)	ENSAMXG00000038254	ENSAMXG00000030744	ENSAMXG00000034282
Red-bellied piranha	MODERN SPECIES	46	MINDY4B (ENSPNAG00000001628)	ENSPNAG00000001618	GAB2 (ENSPNAG00000001609)	nars2 (ENSPNAG00000011197)	tenm4 (ENSPNAG00000011147)	FAM181B (ENSPNAG00000010800)	prcp (ENSPNAG00000010794)	rab30 (ENSPNAG00000010760)	ndufc2 (ENSPNAG00000010736)	thrsp (ENSPNAG00000010711)	guca1c (ENSPNAG00000010706)	ENSPNAG00000010688	zgc:153184 (ENSPNAG00000010675)	FNDC3A (ENSPNAG00000010642) #20	ENSPNAG00000010492 #21	RCBTB2 (ENSPNAG00000010481) #22	lpar6a (ENSPNAG00000010439) #24	ENSPNAG00000010417	lhfpl6 (ENSPNAG00000010397) ##35	ENSPNAG00000010379	cog6 (ENSPNAG00000010367) #34	foxo1a (ENSPNAG00000010319) #32	slc25a15a (ENSPNAG00000010314) #30	stoml3a (ENSPNAG00000010277)	ENSPNAG00000010242	ENSPNAG00000010231	SLC7A1 (ENSPNAG00000010202)	GBE1 (ENSPNAG00000010173)	cadm2b (ENSPNAG00000005237)	bach1a (ENSPNAG00000009992)	ENSPNAG00000009973
Electric eel	MODERN SPECIES	178													zgc:153184 (ENSEEEG00000019613)	FNDC3A (ENSEEEG00000019616) #20	CYSLTR2 (ENSEEEG00000019647)	RCBTB2 (ENSEEEG00000019654) #22	lpar6a (ENSEEEG00000019655) #24	ENSEEEG00000019656	ENSEEEG00000019657 ##35	cog6 (ENSEEEG00000019663) #34	foxo1a (ENSEEEG00000019674) #32	slc25a15a (ENSEEEG00000019675) #30	ENSEEEG00000019676 #30	stoml3a (ENSEEEG00000019677)	stoml3a (ENSEEEG00000019679)	ENSEEEG00000019682	SLC7A1 (ENSEEEG00000019694)	GBE1 (ENSEEEG00000019730)	cadm2b (ENSEEEG00000019889)	ENSEEEG00000019901	bach1a (ENSEEEG00000019903)
Cyprinoidei	ANCESTRAL SPECIES	106	ENSGT01030000234618.D	ENSGT00990000210146	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00990000205057	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B.a.a #21	ENSGT00940000158925 #22	ENSGT00950000183026.B.c.a	ENSGT00730000110966.b #30	ENSGT00940000161558.b #32	ENSGT00390000013518 #34	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00940000159738	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000154507.s.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	77	ENSGT00940000157792.k	ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.b.a.a.b	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a.i.b	ENSGT00940000154730.b.b	ENSGT00940000158099.c	ENSGT00940000156875.a.b	ENSGT00390000010352.e	ENSGT00500000044890.a.b.c	ENSGT00940000164751.a.a	ENSGT00990000205057.a.a	ENSGT00940000153997.b.a.b.c.a.a	ENSGT01100000263484.C.a.e #19	ENSGT00940000159319.i #20	ENSGT00990000203619.B.a.a.a #21	ENSGT00940000158925.e #22	ENSGT00950000183026.B.c.a.d	ENSGT00730000110966.b #30	ENSGT00940000161558.b.a #32	ENSGT00390000013518.i #34	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00940000159738	ENSGT01040000240444.A.a.a.a.a.a.a #24	ENSGT00940000154507.s.b	ENSGT00390000017288	ENSGT00390000003919	ENSGT00940000159055.j	ENSGT00940000164578.a.a	ENSGT00940000161398.e.c	ENSGT00940000156342.d	ENSGT00940000157522.e
Cyprininae_a	ANCESTRAL SPECIES	92	ENSGT00950000182996.b.a.a.b.d.a.f.a.a.a.b.a.a.b	ENSGT01030000234618.D.a	ENSGT01030000234566.e.b.b.a.i.b	ENSGT00940000154730.b.b	ENSGT00940000158099.c	ENSGT00940000156875.a.b	ENSGT00390000010352.e	ENSGT00500000044890.a.b.c	ENSGT00940000164751.a.a	ENSGT01100000263547.a.b.b.b.b.a.b.a.a.b.b	ENSGT00990000205057.b	ENSGT00940000153997.b.a.b.c.a.a	ENSGT01100000263484.C.a.e #19	ENSGT00940000159319.i #20	ENSGT00990000203619.B.a.a.a #21	ENSGT00940000158925.e #22	ENSGT00950000183026.B.c.a.d	ENSGT00730000110966.b.c #30	ENSGT00940000161558.b.a #32	ENSGT00390000013518.i #34	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00940000159738	ENSGT01040000240444.A.a.a.a.a.a.a #24	ENSGT00940000154507.s.b	ENSGT00390000017288	ENSGT00390000003919	ENSGT00940000159055.j	ENSGT00940000164578.a.a	ENSGT00940000161398.e.c	ENSGT00940000156342.d	ENSGT00940000157522.e
Golden-line barbel	MODERN SPECIES	170	ENSSGRG00000031625	GAB2 (ENSSGRG00000031621)	nars2 (ENSSGRG00000031618)	tenm4 (ENSSGRG00000029652)	FAM181B (ENSSGRG00000029599)	prcp (ENSSGRG00000029597)	rab30 (ENSSGRG00000029596)	ndufc2 (ENSSGRG00000029595)	thrsp (ENSSGRG00000029594)	guca1c (ENSSGRG00000029593)	ENSSGRG00000029590	zgc:153184 (ENSSGRG00000029587)	ENSSGRG00000029586 #19	FNDC3A (ENSSGRG00000027736) #20	ENSSGRG00000027685 #21	RCBTB2 (ENSSGRG00000027578) #22	ENSSGRG00000027574	stoml3a (ENSSGRG00000027569)	slc25a15a (ENSSGRG00000027563) #30	foxo1a (ENSSGRG00000027561) #32	cog6 (ENSSGRG00000027199) #34	LHFPL1 (ENSSGRG00000027185) ##35	lpar6a (ENSSGRG00000027183) #24	RNF14 (ENSSGRG00000027180)	ENSSGRG00000027179	ENSSGRG00000027178	mre11a (ENSSGRG00000026459)	ankrd49 (ENSSGRG00000026455)	ENSSGRG00000026454	her8.2 (ENSSGRG00000026451)	her13 (ENSSGRG00000026450)
Common carp reference	MODERN SPECIES	26	ENSCCRG00000052500	nars2 (ENSCCRG00000081751)	tenm4 (ENSCCRG00000025212)	FAM181B (ENSCCRG00000024241)	prcp (ENSCCRG00000022911)	rab30 (ENSCCRG00000081230)	ENSCCRG00000030724	ENSCCRG00000070939	guca1c (ENSCCRG00000061004)	ENSCCRG00000065453	ENSCCRG00000076836	zgc:153184 (ENSCCRG00000032665)	MLNR (ENSCCRG00000075135) #19	ENSCCRG00000016384 #20	ENSCCRG00000016314 #21	RCBTB2 (ENSCCRG00000055724) #22	ENSCCRG00000055050	ENSCCRG00000072854	slc25a15a (ENSCCRG00000032243) #30	foxo1a (ENSCCRG00000025748) #32	cog6 (ENSCCRG00000076385) #34	ENSCCRG00000080373 ##35	ENSCCRG00000080453	ENSCCRG00000080105	ENSCCRG00000066288	lpar6a (ENSCCRG00000053594) #24	ENSCCRG00000079132	ENSCCRG00000061710	ENSCCRG00000036653	ENSCCRG00000007091	ENSCCRG00000079425
Goldfish	MODERN SPECIES	6	tenm4 (ENSCARG00000036674)	ENSCARG00000040099	FAM181B (ENSCARG00000040109)	ENSCARG00000040114	prcp (ENSCARG00000040151)	rab30 (ENSCARG00000040213)	ndufc2 (ENSCARG00000040229)	thrsp (ENSCARG00000040245)	guca1c (ENSCARG00000040251)	ENSCARG00000040266	zgc:153184 (ENSCARG00000040284)	MLNR (ENSCARG00000040298) #19	FNDC3A (ENSCARG00000040363) #20	ENSCARG00000041368	ENSCARG00000041380 #21	RCBTB2 (ENSCARG00000041413) #22	ENSCARG00000041572	ENSCARG00000041578	slc25a15a (ENSCARG00000041624) #30	foxo1a (ENSCARG00000041636) #32	ENSCARG00000041647	ENSCARG00000041657	ENSCARG00000041662	ENSCARG00000041687	ENSCARG00000041699	or62c1 (ENSCARG00000041705)	ENSCARG00000041717	ENSCARG00000041724	ENSCARG00000041734	or55a2 (ENSCARG00000041736)	ENSCARG00000041764
Cyprininae	ANCESTRAL SPECIES	340	ENSGT00940000159187.c	ENSGT00390000016695.s	ENSGT00940000157792.l	ENSGT01030000234566.e.b.b.a.i.a	ENSGT00940000154730.b.a.b	ENSGT00980000198746	ENSGT00940000158099.d	ENSGT00940000156875.a.a	ENSGT00390000010352.f	ENSGT00500000044890.a.b.d	ENSGT00940000164751.a.b	ENSGT00940000153997.b.a.b.c.a.b	ENSGT01100000263484.C.a.f #19	ENSGT00940000159319.j #20	ENSGT00990000203619.B.a.a.b #21	ENSGT00940000158925.f #22	ENSGT00950000183026.A.b.c	ENSGT00950000183026.B.c.a.c	ENSGT01030000234614.B.a.a.b.b.t	ENSGT00940000161558.b.b #32	ENSGT01040000240444.A.a.a.a.a.a.b #24
Goldfish	MODERN SPECIES	2038			FAM181B (ENSCARG00000047505)	ENSCARG00000047473	prcp (ENSCARG00000047397)	rab30 (ENSCARG00000047359)	ndufc2 (ENSCARG00000047347)	thrsp (ENSCARG00000047341)	guca1c (ENSCARG00000047316)	ENSCARG00000047300	ENSCARG00000047293	zgc:153184 (ENSCARG00000047286)	MLNR (ENSCARG00000047279) #19	FNDC3A (ENSCARG00000046625) #20	ENSCARG00000046538 #21	RCBTB2 (ENSCARG00000046349) #22	ENSCARG00000046311	stoml3a (ENSCARG00000046269)	ENSCARG00000046259	foxo1a (ENSCARG00000046232) #32	ENSCARG00000046211	lpar6a (ENSCARG00000046172) #24
Cyprininae_a	ANCESTRAL SPECIES	153	ENSGT00940000159187.c	ENSGT00390000016695.s	ENSGT00940000157792.l	ENSGT01030000234618.D.b	ENSGT00990000210146	ENSGT01030000234566.e.b.b.a.i.a	ENSGT00980000198746	ENSGT00940000158099.d	ENSGT00940000156875.a.a	ENSGT00500000044890.a.b.d	ENSGT00940000164751.a.b	ENSGT00940000153997.b.a.b.c.a.b	ENSGT01100000263484.C.a.f #19	ENSGT00940000159319.j #20	ENSGT00990000203619.B.a.a.b #21	ENSGT00940000158925.f #22	ENSGT00950000183026.A.b.c	ENSGT00950000183026.B.c.a.c	ENSGT01030000234614.B.a.a.b.b.t	ENSGT00730000110966.b.d #30	ENSGT00940000161558.b.b #32	ENSGT01040000240444.A.a.a.a.a.a.b #24	ENSGT00940000157522.f	ENSGT00940000162075.a.a.a	ENSGT00390000006095.b	ENSGT00940000159610.q	ENSGT00940000160281.m	ENSGT00940000161057.m	ENSGT00940000154866.A.c.a	ENSGT00940000157514.a.d	ENSGT01090000260005.a.b.a.b.b.i.b
Common carp reference	MODERN SPECIES	39	sgcg (ENSCCRG00000025095)	ENSCCRG00000068170	GAB2 (ENSCCRG00000025102)	nars2 (ENSCCRG00000058508)	ENSCCRG00000079602	tenm4 (ENSCCRG00000052510)	ENSCCRG00000022932	prcp (ENSCCRG00000077399)	rab30 (ENSCCRG00000022904)	ENSCCRG00000059568	guca1c (ENSCCRG00000022897)	zgc:153184 (ENSCCRG00000022894)	MLNR (ENSCCRG00000065188) #19	ENSCCRG00000022881 #21	ENSCCRG00000080116 #20	RCBTB2 (ENSCCRG00000071823) #22	ENSCCRG00000004796	ENSCCRG00000066850	stoml3a (ENSCCRG00000063608)	foxo1a (ENSCCRG00000055990) #32	ENSCCRG00000067140	cog6 (ENSCCRG00000015765) #34	lpar6a (ENSCCRG00000056793) #24	foxl2a (ENSCCRG00000072197)	mrps22 (ENSCCRG00000067440)	ech1 (ENSCCRG00000003219)	ENSCCRG00000050926	meis3 (ENSCCRG00000011800)	ENSCCRG00000080397	sirt2 (ENSCCRG00000018661)	ENSCCRG00000018711
Golden-line barbel	MODERN SPECIES	772															ENSSGRG00000020114 #21	RCBTB2 (ENSSGRG00000020117) #22	ENSSGRG00000020140	stoml3a (ENSSGRG00000020141)	slc25a15a (ENSSGRG00000020142) #30	foxo1a (ENSSGRG00000020143) #32	ENSSGRG00000020146	cog6 (ENSSGRG00000020152) #34	ENSSGRG00000020280 ##35
Zebrafish	MODERN SPECIES	6	cldnj (ENSDARG00000058880)	cldne (ENSDARG00000043128)	cldnf (ENSDARG00000043133)	cldna (ENSDARG00000069888)	ENSDARG00000079385	ppp5c (ENSDARG00000034313)	tgfb1a (ENSDARG00000041502)	ENSDARG00000019442	ankrd49 (ENSDARG00000023508)	mre11a (ENSDARG00000105014)	guca1c (ENSDARG00000030758)	zgc:153184 (ENSDARG00000099645)	MLNR (ENSDARG00000091207) #19	FNDC3A (ENSDARG00000105503) #20	SLITRK5 (ENSDARG00000103359)	RCBTB2 (ENSDARG00000090687) #22	ENSDARG00000074984	stoml3a (ENSDARG00000079914)	ENSDARG00000113542	slc25a15a (ENSDARG00000063539) #30	foxo1a (ENSDARG00000099555) #32	cog6 (ENSDARG00000103149) #34	ENSDARG00000115101 ##35	lpar6a (ENSDARG00000062552) #24	ENSDARG00000058869	RNF14 (ENSDARG00000078683)	RNF14 (ENSDARG00000104631)	ENSDARG00000091727	ENSDARG00000112977	MINDY4B (ENSDARG00000112337)	clrn1 (ENSDARG00000102890)
Clupeiformes	ANCESTRAL SPECIES	31	ENSGT00940000157792	ENSGT01030000234618.D	ENSGT01030000234566.e.b.b.a	ENSGT00940000154730.b	ENSGT00980000198746	ENSGT00940000158099	ENSGT00940000156875	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000164751.a	ENSGT00990000205057	ENSGT00940000153997.b.a.b.c.a	ENSGT01100000263484.C.a #19	ENSGT00940000159319 #20	ENSGT00990000203619.B.a.a #21	ENSGT00940000158925 #22	ENSGT01040000240444.A.a.a.a.a.a #24	ENSGT00940000159738	ENSGT00990000203589.a.b.a.b.rb.a ##35	ENSGT00390000013518 #34	ENSGT00940000161558.b #32	ENSGT00730000110966.a.b.a #30	ENSGT01030000234614.B.a.a.b.a	ENSGT00950000183026.B.c.a	ENSGT00950000183026.A.b	ENSGT00940000155349.c	ENSGT00390000017040.n	ENSGT00940000155947.a	ENSGT00940000167916	ENSGT00940000158923.f	ENSGT00940000156013
Denticle herring	MODERN SPECIES	4	ENSDCDG00000017286	prcp (ENSDCDG00000017287)	rab30 (ENSDCDG00000017289)	ndufc2 (ENSDCDG00000017296)	guca1c (ENSDCDG00000017300)	ENSDCDG00000017301	ENSDCDG00000017303	ENSDCDG00000017305	prcp (ENSDCDG00000017309)	ndufc2 (ENSDCDG00000017312)	ENSDCDG00000017314	zgc:153184 (ENSDCDG00000017317)	MLNR (ENSDCDG00000017318) #19	FNDC3A (ENSDCDG00000017436) #20	ENSDCDG00000021233 #21	RCBTB2 (ENSDCDG00000021275) #22	lpar6a (ENSDCDG00000021284) #24	NEK3 (ENSDCDG00000021287)	ENSDCDG00000021292 ##35	cog6 (ENSDCDG00000021332) #34	foxo1a (ENSDCDG00000021409) #32	SLC25A15 (ENSDCDG00000021414) #30	CUL3 (ENSDCDG00000021442)	FAM124B (ENSDCDG00000021623)	MMP28 (ENSDCDG00000021627)	taf15 (ENSDCDG00000021638)	sbds (ENSDCDG00000021643)	porb (ENSDCDG00000021646)	CLDN4 (ENSDCDG00000021649)	CUL3 (ENSDCDG00000021652)	FAM124B (ENSDCDG00000021655)
Atlantic herring	MODERN SPECIES	25	GAB2 (ENSCHAG00000017175)	nars2 (ENSCHAG00000017182)	tenm4 (ENSCHAG00000017480)	ENSCHAG00000020639	FAM181B (ENSCHAG00000020647)	ENSCHAG00000020660	prcp (ENSCHAG00000020680)	rab30 (ENSCHAG00000020885)	ndufc2 (ENSCHAG00000020909)	thrsp (ENSCHAG00000020926)	guca1c (ENSCHAG00000020931)	ENSCHAG00000020942	zgc:153184 (ENSCHAG00000020957)	MLNR (ENSCHAG00000020968) #19	ENSCHAG00000021184 #20	RCBTB2 (ENSCHAG00000024123) #22	NEK3 (ENSCHAG00000024196)	lhfpl6 (ENSCHAG00000024203) ##35	cog6 (ENSCHAG00000024216) #34	foxo1a (ENSCHAG00000024399) #32	SLC25A15 (ENSCHAG00000024403) #30	STOML3 (ENSCHAG00000024417)	ENSCHAG00000024449	slc22a7b.1 (ENSCHAG00000000286)	ENSCHAG00000000303	ENSCHAG00000000417	ENSCHAG00000000521	ENSCHAG00000000647	SLC7A1 (ENSCHAG00000000738)	GBE1 (ENSCHAG00000001188)	cadm2b (ENSCHAG00000001735)
Spotted gar	MODERN SPECIES	669	ENSLOCG00000009105	GRIK1 (ENSLOCG00000009083)	bach1b (ENSLOCG00000009077)	ENSLOCG00000009068	cct8 (ENSLOCG00000009042)	usp16 (ENSLOCG00000009029)	rwdd2b (ENSLOCG00000009019)	LTN1 (ENSLOCG00000008998)	cadm2a (ENSLOCG00000008983)	GBE1 (ENSLOCG00000008974)	paxbp1 (ENSLOCG00000008965)	ENSLOCG00000008941	ENSLOCG00000008932	ENSLOCG00000008924	CYSLTR2 (ENSLOCG00000018049)	RCBTB2 (ENSLOCG00000008911) #22	lpar6a (ENSLOCG00000018047) #24	ENSLOCG00000018045	rb1 (ENSLOCG00000008882) #23	ENSLOCG00000008861	ENSLOCG00000008856	NHLRC3 (ENSLOCG00000008843) #36	lhfpl6 (ENSLOCG00000008837) ##35	cog6 (ENSLOCG00000008824) #34	foxo1b (ENSLOCG00000008807) #32	mrps31 (ENSLOCG00000008798) #31	slc25a15a (ENSLOCG00000008787) #30	tpte (ENSLOCG00000008770)	fgl1b (ENSLOCG00000008761)	THSD1 (ENSLOCG00000008731)	vps36 (ENSLOCG00000008718)
Reedfish	MODERN SPECIES	12	ENSECRG00000005747	ENSECRG00000005795 #14	zgc:112408 (ENSECRG00000005804)	lipia (ENSECRG00000005815)	ENSECRG00000005826	ENSECRG00000005830	ENSECRG00000005838	robo2 (ENSECRG00000005858)	ENSECRG00000005902	ENSECRG00000005922	ROBO1 (ENSECRG00000005950)	mos (ENSECRG00000005968)	ENSECRG00000005974 #19	FNDC3A (ENSECRG00000005987) #20	CYSLTR2 (ENSECRG00000006007)	RCBTB2 (ENSECRG00000006014) #22	RB1 (ENSECRG00000006025) #23	lpar6a (ENSECRG00000006042) #24	NEK3 (ENSECRG00000006051)	ENSECRG00000006066	vps36 (ENSECRG00000006080)	THSD1 (ENSECRG00000006101)	fgl1b (ENSECRG00000006120)	tpte (ENSECRG00000006150)	slc25a15a (ENSECRG00000006166) #30	mrps31 (ENSECRG00000006183) #31	ENSECRG00000006192	foxo1b (ENSECRG00000006199) #32	COG6 (ENSECRG00000006230) #34	NHLRC3 (ENSECRG00000006299) #36	PROSER1 (ENSECRG00000006311) #37
Elephant shark	MODERN SPECIES	1505	ENSCMIG00000005955	slc10a2 (ENSCMIG00000005941)	ENSCMIG00000005934	ENSCMIG00000005931	poglut2 (ENSCMIG00000005924)	BIVM (ENSCMIG00000005919)	zgc:172121 (ENSCMIG00000005913)	METTL21C (ENSCMIG00000005908)	ENSCMIG00000005894	TPP2 (ENSCMIG00000005842)	ENSCMIG00000005816	cab39l (ENSCMIG00000005809) #16	cdadc1 (ENSCMIG00000005804) #18	MLNR (ENSCMIG00000005802) #19	FNDC3A (ENSCMIG00000005415) #20	RCBTB2 (ENSCMIG00000005213) #22	rb1 (ENSCMIG00000004903) #23