Laurasiatheria ANCESTRAL SPECIES 18 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Laurasiatheria_a ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Artiodactyla ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Artiodactyla_a ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Camelidae ANCESTRAL SPECIES 77 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D Alpaca MODERN SPECIES 1809 ENSVPAG00000011828 #22 Arabian camel MODERN SPECIES 21 RPS20 (ENSCDRG00005020230) LYN (ENSCDRG00005020208) TGS1 (ENSCDRG00005020178) TMEM68 (ENSCDRG00005020157) ENSCDRG00005020056 SOX17 (ENSCDRG00005020040) MRPL15 (ENSCDRG00005020012) LYPLA1 (ENSCDRG00005019997) TCEA1 (ENSCDRG00005019946) ENSCDRG00005019928 ATP6V1H (ENSCDRG00005019870) OPRK1 (ENSCDRG00005019845) NPBWR1 (ENSCDRG00005019836) ALKAL1 (ENSCDRG00005019754) ST18 (ENSCDRG00005019658) PCMTD1 (ENSCDRG00005019634) #22 ENSCDRG00005019605 ENSCDRG00005019593 SNAI2 (ENSCDRG00005019580) CLXN (ENSCDRG00005019552) UBE2V2 (ENSCDRG00005019522) MCM4 (ENSCDRG00005019348) PRKDC (ENSCDRG00005009363) ENSCDRG00005008972 Artiodactyla_b ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Cetacea ANCESTRAL SPECIES 17 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Odontoceti ANCESTRAL SPECIES 20 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121.n ENSGT00940000155121.m.b ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121.n ENSGT00940000155121.m.a ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121.m.a ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Monodontidae ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121.m.a ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Narwhal MODERN SPECIES 300 TMEM68 (ENSMMNG00015015221) XKR4 (ENSMMNG00015015264) ENSMMNG00015015277 RP1 (ENSMMNG00015015294) SOX17 (ENSMMNG00015015308) MRPL15 (ENSMMNG00015015322) LYPLA1 (ENSMMNG00015015363) ENSMMNG00015015524 RGS20 (ENSMMNG00015015612) ATP6V1H (ENSMMNG00015015669) OPRK1 (ENSMMNG00015015726) NPBWR1 (ENSMMNG00015015745) RB1CC1 (ENSMMNG00015015771) ALKAL1 (ENSMMNG00015015819) ST18 (ENSMMNG00015015870) PCMTD1 (ENSMMNG00015015912) #22 ENSMMNG00015015939 SNTG1 (ENSMMNG00015016248) PPDPFL (ENSMMNG00015017304) SNAI2 (ENSMMNG00015017362) CLXN (ENSMMNG00015017393) ENSMMNG00015017447 MCM4 (ENSMMNG00015017615) PRKDC (ENSMMNG00015018377) CEBPD (ENSMMNG00015019866) SPIDR (ENSMMNG00015019877) Beluga whale MODERN SPECIES 47 ENSDLEG00000015141 RP1 (ENSDLEG00000015156) SOX17 (ENSDLEG00000015171) TPRKB (ENSDLEG00000015177) MRPL15 (ENSDLEG00000015181) ENSDLEG00000015196 ENSDLEG00000015212 ENSDLEG00000015221 ENSDLEG00000015228 RGS20 (ENSDLEG00000015243) ATP6V1H (ENSDLEG00000015265) OPRK1 (ENSDLEG00000015294) NPBWR1 (ENSDLEG00000015304) RB1CC1 (ENSDLEG00000015318) ST18 (ENSDLEG00000015349) PCMTD1 (ENSDLEG00000015382) #22 ENSDLEG00000015408 SNTG1 (ENSDLEG00000015417) SNAI2 (ENSDLEG00000015475) EFCAB1 (ENSDLEG00000015484) UBE2V2 (ENSDLEG00000015496) MCM4 (ENSDLEG00000015514) PRKDC (ENSDLEG00000016005) CEBPD (ENSDLEG00000020408) SPIDR (ENSDLEG00000020423) Vaquita MODERN SPECIES 8 XKR4 (ENSPSNG00000011695) ENSPSNG00000011669 ENSPSNG00000011608 RP1 (ENSPSNG00000011554) SOX17 (ENSPSNG00000011510) MRPL15 (ENSPSNG00000011469) ENSPSNG00000011338 ENSPSNG00000011078 RGS20 (ENSPSNG00000010954) ATP6V1H (ENSPSNG00000010849) OPRK1 (ENSPSNG00000010750) NPBWR1 (ENSPSNG00000020139) RB1CC1 (ENSPSNG00000020100) ALKAL1 (ENSPSNG00000020029) ST18 (ENSPSNG00000019900) PCMTD1 (ENSPSNG00000019835) #22 ENSPSNG00000019801 SNTG1 (ENSPSNG00000018422) PPDPFL (ENSPSNG00000018058) SNAI2 (ENSPSNG00000018025) CLXN (ENSPSNG00000017935) ENSPSNG00000017756 MCM4 (ENSPSNG00000017171) PRKDC (ENSPSNG00000016032) CEBPD (ENSPSNG00000015718) SPIDR (ENSPSNG00000015635) Dolphin MODERN SPECIES 6619 PCMTD1 (ENSTTRG00000007943) #22 Sperm whale MODERN SPECIES 6 TMEM68 (ENSPCTG00005007220) ENSPCTG00005007335 RP1 (ENSPCTG00005007366) SOX17 (ENSPCTG00005007395) ENSPCTG00005007411 MRPL15 (ENSPCTG00005007420) LYPLA1 (ENSPCTG00005007458) TCEA1 (ENSPCTG00005007517) RGS20 (ENSPCTG00005007671) ATP6V1H (ENSPCTG00005007732) OPRK1 (ENSPCTG00005007828) NPBWR1 (ENSPCTG00005007847) RB1CC1 (ENSPCTG00005007860) ALKAL1 (ENSPCTG00005007890) ST18 (ENSPCTG00005007942) PCMTD1 (ENSPCTG00005008026) #22 SNTG1 (ENSPCTG00005008190) PPDPFL (ENSPCTG00005011221) SNAI2 (ENSPCTG00005011333) EFCAB1 (ENSPCTG00005011370) UBE2V2 (ENSPCTG00005011488) MCM4 (ENSPCTG00005011558) PRKDC (ENSPCTG00005012331) CEBPD (ENSPCTG00005017828) ENSPCTG00005017855 Blue whale MODERN SPECIES 8 XKR4 (ENSBMSG00010015591) ENSBMSG00010015625 RP1 (ENSBMSG00010015672) SOX17 (ENSBMSG00010015701) MRPL15 (ENSBMSG00010015731) LYPLA1 (ENSBMSG00010015788) TCEA1 (ENSBMSG00010015953) RGS20 (ENSBMSG00010016086) ATP6V1H (ENSBMSG00010016209) OPRK1 (ENSBMSG00010016297) ENSBMSG00010016334 NPBWR1 (ENSBMSG00010016365) RB1CC1 (ENSBMSG00010016414) ALKAL1 (ENSBMSG00010016599) ST18 (ENSBMSG00010016711) PCMTD1 (ENSBMSG00010016806) #22 SNTG1 (ENSBMSG00010017144) PPDPFL (ENSBMSG00010020986) SNAI2 (ENSBMSG00010021014) CLXN (ENSBMSG00010021037) UBE2V2 (ENSBMSG00010021065) MCM4 (ENSBMSG00010021185) PRKDC (ENSBMSG00010021768) CEBPD (ENSBMSG00010022251) ENSBMSG00010022252 ENSBMSG00010022256 Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000163032 ENSGT01030000235502 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Yarkand deer MODERN SPECIES 13 XKR4 (ENSCHYG00000023732) ENSCHYG00000023702 SOX17 (ENSCHYG00000023663) MRPL15 (ENSCHYG00000023624) LYPLA1 (ENSCHYG00000023356) ENSCHYG00000022967 RGS20 (ENSCHYG00000022852) ATP6V1H (ENSCHYG00000022766) OPRK1 (ENSCHYG00000022698) NPBWR1 (ENSCHYG00000022686) RB1CC1 (ENSCHYG00000022542) ALKAL1 (ENSCHYG00000022488) ENSCHYG00000022445 ENSCHYG00000022400 ST18 (ENSCHYG00000021991) PCMTD1 (ENSCHYG00000021921) #22 ENSCHYG00000021851 SNTG1 (ENSCHYG00000020644) ENSCHYG00000020498 PPDPFL (ENSCHYG00000020457) SNAI2 (ENSCHYG00000020385) CLXN (ENSCHYG00000020174) UBE2V2 (ENSCHYG00000020085) MCM4 (ENSCHYG00000019115) PRKDC (ENSCHYG00000016168) ENSCHYG00000015631 ENSCHYG00000015611 SPIDR (ENSCHYG00000015121) CEBPD (ENSCHYG00000015055) ENSCHYG00000015002 ENSCHYG00000014945 Percora_a ANCESTRAL SPECIES 23 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000163032 ENSGT01030000235502 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Siberian musk deer MODERN SPECIES 181 TMEM68 (ENSMMSG00000018879) XKR4 (ENSMMSG00000018988) ENSMMSG00000019022 SOX17 (ENSMMSG00000019055) ENSMMSG00000019067 LYPLA1 (ENSMMSG00000019125) TCEA1 (ENSMMSG00000019249) RGS20 (ENSMMSG00000019413) ATP6V1H (ENSMMSG00000019499) OPRK1 (ENSMMSG00000019585) ENSMMSG00000019617 NPBWR1 (ENSMMSG00000019656) RB1CC1 (ENSMMSG00000019672) ALKAL1 (ENSMMSG00000019751) ST18 (ENSMMSG00000019802) ENSMMSG00000019886 #22 SNTG1 (ENSMMSG00000020088) Bovidae ANCESTRAL SPECIES 22 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000163032 ENSGT01030000235502 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Bovinae ANCESTRAL SPECIES 18 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000010130.f ENSGT00390000003289.g.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000002144.i.b ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb.fb.b ENSGT00390000014654 ENSGT00940000163032 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Bos ANCESTRAL SPECIES 21 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000010130.f ENSGT00390000003289.g.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000002144.i.b ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb.fb.b ENSGT00390000014654 ENSGT00940000163032 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b.h ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Bos_a ANCESTRAL SPECIES 92 ENSGT00940000154242.b ENSGT00390000009040.a ENSGT00940000154185.f.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000010130.f ENSGT00390000003289.g.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000002144.i.b ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb.fb.b ENSGT00390000014654 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b.h Wild yak MODERN SPECIES 452 ENSBMUG00000013408 ENSBMUG00000013395 ENSBMUG00000013385 TCEA1 (ENSBMUG00000013369) RGS20 (ENSBMUG00000013345) ENSBMUG00000013322 ATP6V1H (ENSBMUG00000013251) OPRK1 (ENSBMUG00000013163) NPBWR1 (ENSBMUG00000013137) RB1CC1 (ENSBMUG00000013120) ENSBMUG00000013083 ENSBMUG00000013069 ENSBMUG00000013053 ST18 (ENSBMUG00000013031) PCMTD1 (ENSBMUG00000012986) #22 ENSBMUG00000012936 SNTG1 (ENSBMUG00000011959) ENSBMUG00000011359 SNAI2 (ENSBMUG00000011335) CLXN (ENSBMUG00000011311) UBE2V2 (ENSBMUG00000011242) MCM4 (ENSBMUG00000011227) PRKDC (ENSBMUG00000011197) ENSBMUG00000010962 SPIDR (ENSBMUG00000010938) ENSBMUG00000010902 ENSBMUG00000010886 ENSBMUG00000010853 ENSBMUG00000010840 ENSBMUG00000010821 Bos_b ANCESTRAL SPECIES 25 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000010130.f ENSGT00390000003289.g.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb.fb.b ENSGT00390000014654 ENSGT00940000163032 ENSGT00960000186612.B.a.a.d ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b.h ENSGT00950000182893.a.a.a.b Cow MODERN SPECIES 5 XKR4 (ENSBTAG00000044050) RP1 (ENSBTAG00000011203) SOX17 (ENSBTAG00000005748) ENSBTAG00000052277 MRPL15 (ENSBTAG00000001174) LYPLA1 (ENSBTAG00000004243) TCEA1 (ENSBTAG00000003460) RGS20 (ENSBTAG00000003454) ENSBTAG00000054835 ATP6V1H (ENSBTAG00000003450) OPRK1 (ENSBTAG00000000914) NPBWR1 (ENSBTAG00000016159) RB1CC1 (ENSBTAG00000000878) ENSBTAG00000048814 ST18 (ENSBTAG00000005560) PCMTD1 (ENSBTAG00000017492) #22 SNTG1 (ENSBTAG00000002448) ENSBTAG00000027760 PPDPFL (ENSBTAG00000038286) SNAI2 (ENSBTAG00000013227) CLXN (ENSBTAG00000008693) UBE2V2 (ENSBTAG00000023218) MCM4 (ENSBTAG00000017021) PRKDC (ENSBTAG00000017019) H3-5 (ENSBTAG00000017016) SPIDR (ENSBTAG00000044106) CEBPD (ENSBTAG00000046307) ENSBTAG00000040351 ENSBTAG00000054983 ENSBTAG00000009474 HAS2 (ENSBTAG00000019892) Hybrid Bos Indicus MODERN SPECIES 5 ENSBIXG00005023590 ENSBIXG00005004065 TCEA1 (ENSBIXG00005023901) RGS20 (ENSBIXG00005004106) ENSBIXG00005023996 ENSBIXG00005004122 ENSBIXG00005024120 OPRK1 (ENSBIXG00005024194) NPBWR1 (ENSBIXG00005024209) RB1CC1 (ENSBIXG00005024270) ALKAL1 (ENSBIXG00005024331) ENSBIXG00005024381 ST18 (ENSBIXG00005024438) ENSBIXG00005004177 ENSBIXG00005024471 PCMTD1 (ENSBIXG00005004184) #22 ENSBIXG00005004193 SNTG1 (ENSBIXG00005024969) ENSBIXG00005025067 ENSBIXG00005025099 SNAI2 (ENSBIXG00005025145) CLXN (ENSBIXG00005025221) ENSBIXG00005025298 MCM4 (ENSBIXG00005025814) PRKDC (ENSBIXG00005026568) ENSBIXG00005026643 SPIDR (ENSBIXG00005004566) CEBPD (ENSBIXG00005026750) ENSBIXG00005026755 ENSBIXG00005026768 ENSBIXG00005026793 American bison MODERN SPECIES 3036 XKR4 (ENSBBBG00000004357) RP1 (ENSBBBG00000008007) ENSBBBG00000017605 ENSBBBG00000008932 TCEA1 (ENSBBBG00000004377) RGS20 (ENSBBBG00000017756) ENSBBBG00000006782 ENSBBBG00000004389 OPRK1 (ENSBBBG00000017852) NPBWR1 (ENSBBBG00000017860) RB1CC1 (ENSBBBG00000017917) ALKAL1 (ENSBBBG00000004408) ENSBBBG00000017946 ENSBBBG00000004417 ST18 (ENSBBBG00000017983) ENSBBBG00000004427 #22 SNTG1 (ENSBBBG00000018671) PPDPFL (ENSBBBG00000018734) SNAI2 (ENSBBBG00000018743) CLXN (ENSBBBG00000018768) UBE2V2 (ENSBBBG00000018781) MCM4 (ENSBBBG00000018801) PRKDC (ENSBBBG00000004878) ENSBBBG00000019084 SPIDR (ENSBBBG00000019113) ENSBBBG00000019149 ENSBBBG00000019155 ENSBBBG00000004933 ENSBBBG00000019172 ZHX2 (ENSBBBG00000008388) DERL1 (ENSBBBG00000019213) Caprinae ANCESTRAL SPECIES 18 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb ENSGT00390000014654 ENSGT00940000163032 ENSGT01030000235502 ENSGT00940000162302 ENSGT00390000010337.B.a.b.k.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Rambouillet Sheep MODERN SPECIES 25 TMEM68 (ENSOARG00020025479) XKR4 (ENSOARG00020025470) RP1 (ENSOARG00020025463) SOX17 (ENSOARG00020025457) MRPL15 (ENSOARG00020025448) LYPLA1 (ENSOARG00020025402) TCEA1 (ENSOARG00020025361) RGS20 (ENSOARG00020025341) ATP6V1H (ENSOARG00020025312) OPRK1 (ENSOARG00020025297) NPBWR1 (ENSOARG00020025293) RB1CC1 (ENSOARG00020025223) ALKAL1 (ENSOARG00020025195) ENSOARG00020025180 ST18 (ENSOARG00020025124) PCMTD1 (ENSOARG00020025108) #22 SNTG1 (ENSOARG00020024728) PPDPFL (ENSOARG00020024587) SNAI2 (ENSOARG00020024572) CLXN (ENSOARG00020024519) MCM4 (ENSOARG00020024419) PRKDC (ENSOARG00020010704) ENSOARG00020009951 CEBPD (ENSOARG00020009877) ENSOARG00020016702 ENSOARG00020016522 HAS2 (ENSOARG00020016454) ENSOARG00020016416 ZHX2 (ENSOARG00020016397) DERL1 (ENSOARG00020016190) TBC1D31 (ENSOARG00020015866) Goat MODERN SPECIES 5 TMEM68 (ENSCHIG00000023378) XKR4 (ENSCHIG00000012863) RP1 (ENSCHIG00000024939) SOX17 (ENSCHIG00000020928) ENSCHIG00000000811 ENSCHIG00000009109 ENSCHIG00000022556 RGS20 (ENSCHIG00000006425) ATP6V1H (ENSCHIG00000016415) OPRK1 (ENSCHIG00000023230) NPBWR1 (ENSCHIG00000010898) RB1CC1 (ENSCHIG00000017614) ENSCHIG00000027047 ENSCHIG00000015420 ST18 (ENSCHIG00000013632) ENSCHIG00000024195 #22 ENSCHIG00000011128 ##22 SNTG1 (ENSCHIG00000023177) PPDPFL (ENSCHIG00000017544) SNAI2 (ENSCHIG00000024410) CLXN (ENSCHIG00000017174) ENSCHIG00000013718 MCM4 (ENSCHIG00000018094) PRKDC (ENSCHIG00000013822) ENSCHIG00000011570 SPIDR (ENSCHIG00000018290) CEBPD (ENSCHIG00000010420) ENSCHIG00000011893 ENSCHIG00000026116 ENSCHIG00000006578 ENSCHIG00000011424 Pecora ANCESTRAL SPECIES ENSGT00950000183032.A.a.g.b #22 Percora_a ANCESTRAL SPECIES ENSGT00950000183032.A.a.g.b #22 Siberian musk deer MODERN SPECIES 373 ZNF516 (ENSMMSG00000008709) ENSMMSG00000008670 ZNF236 (ENSMMSG00000008516) MBP (ENSMMSG00000008128) GALR1 (ENSMMSG00000008077) SALL3 (ENSMMSG00000007960) ATP9B (ENSMMSG00000007533) NFATC1 (ENSMMSG00000007403) CTDP1 (ENSMMSG00000007350) KCNG2 (ENSMMSG00000007319) SLC66A2 (ENSMMSG00000007214) HSBP1L1 (ENSMMSG00000007184) ENSMMSG00000007113 ENSMMSG00000007067 RBFA (ENSMMSG00000007047) ENSMMSG00000007032 #22 ENSMMSG00000007011 #22 ADNP2 (ENSMMSG00000006994) ENSMMSG00000006967 PARD6G (ENSMMSG00000006923) ENSMMSG00000006895 ENSMMSG00000006868 Bovidae ANCESTRAL SPECIES ENSGT00950000183032.A.a.g.b #22 Bovinae ANCESTRAL SPECIES ENSGT00950000183032.A.a.g.b #22 American bison MODERN SPECIES 10 ENSBBBG00000025392 #22 Pecora ANCESTRAL SPECIES ENSGT00950000183032.A.a.h #22 Percora_a ANCESTRAL SPECIES ENSGT00950000183032.A.a.h #22 Bovidae ANCESTRAL SPECIES ENSGT00950000183032.A.a.h #22 Caprinae ANCESTRAL SPECIES ENSGT00950000183032.A.a.h #22 Goat MODERN SPECIES 9 LRP3 (ENSCHIG00000012481) SLC7A10 (ENSCHIG00000023717) CEBPA (ENSCHIG00000011587) CEBPG (ENSCHIG00000008784) PEPD (ENSCHIG00000015514) CHST8 (ENSCHIG00000019583) KCTD15 (ENSCHIG00000023579) LSM14A (ENSCHIG00000009458) ENSCHIG00000008709 GARRE1 (ENSCHIG00000007746) GPI (ENSCHIG00000016122) PDCD2L (ENSCHIG00000024774) UBA2 (ENSCHIG00000014051) WTIP (ENSCHIG00000025695) ENSCHIG00000011644 ENSCHIG00000022635 #22 ENSCHIG00000013055 ENSCHIG00000024732 ENSCHIG00000009298 ENSCHIG00000021338 ENSCHIG00000014055 ZNF599 (ENSCHIG00000025528) ENSCHIG00000013449 ZNF792 (ENSCHIG00000025015) GRAMD1A (ENSCHIG00000019950) SCN1B (ENSCHIG00000026195) HPN (ENSCHIG00000023913) ENSCHIG00000012557 LGI4 (ENSCHIG00000005629) ENSCHIG00000027209 ENSCHIG00000014550 Siberian musk deer MODERN SPECIES 373 ENSMMSG00000008670 ZNF236 (ENSMMSG00000008516) MBP (ENSMMSG00000008128) GALR1 (ENSMMSG00000008077) SALL3 (ENSMMSG00000007960) ATP9B (ENSMMSG00000007533) NFATC1 (ENSMMSG00000007403) CTDP1 (ENSMMSG00000007350) KCNG2 (ENSMMSG00000007319) SLC66A2 (ENSMMSG00000007214) HSBP1L1 (ENSMMSG00000007184) ENSMMSG00000007113 ENSMMSG00000007067 RBFA (ENSMMSG00000007047) ENSMMSG00000007032 #22 ENSMMSG00000007011 #22 ADNP2 (ENSMMSG00000006994) ENSMMSG00000006967 PARD6G (ENSMMSG00000006923) ENSMMSG00000006895 ENSMMSG00000006868 Suina ANCESTRAL SPECIES 26 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Pig MODERN SPECIES 12 TGS1 (ENSSSCG00000006251) TMEM68 (ENSSSCG00000006252) XKR4 (ENSSSCG00000031813) RP1 (ENSSSCG00000042752) SOX17 (ENSSSCG00000060730) MRPL15 (ENSSSCG00000030578) LYPLA1 (ENSSSCG00000006260) TCEA1 (ENSSSCG00000006261) RGS20 (ENSSSCG00000006262) ATP6V1H (ENSSSCG00000006263) OPRK1 (ENSSSCG00000006264) NPBWR1 (ENSSSCG00000059721) RB1CC1 (ENSSSCG00000028902) ALKAL1 (ENSSSCG00000033922) ST18 (ENSSSCG00000006266) PCMTD1 (ENSSSCG00000006267) #22 SNTG1 (ENSSSCG00000034495) ENSSSCG00000045207 SNAI2 (ENSSSCG00000039568) CLXN (ENSSSCG00000032887) UBE2V2 (ENSSSCG00000022190) MCM4 (ENSSSCG00000006273) PRKDC (ENSSSCG00000006274) CEBPD (ENSSSCG00000032367) SPIDR (ENSSSCG00000006277) PRRX1 (ENSSSCG00000031503) GORAB (ENSSSCG00000006280) NTMT2 (ENSSSCG00000006281) KIFAP3 (ENSSSCG00000006282) SCYL3 (ENSSSCG00000006283) C1orf112 (ENSSSCG00000006284) Chacoan peccary MODERN SPECIES 840 TGS1 (ENSCWAG00000008274) TMEM68 (ENSCWAG00000008128) XKR4 (ENSCWAG00000008058) RP1 (ENSCWAG00000007943) SOX17 (ENSCWAG00000016827) MRPL15 (ENSCWAG00000016794) LYPLA1 (ENSCWAG00000016699) TCEA1 (ENSCWAG00000016391) RGS20 (ENSCWAG00000016261) ATP6V1H (ENSCWAG00000016149) OPRK1 (ENSCWAG00000016074) NPBWR1 (ENSCWAG00000016059) RB1CC1 (ENSCWAG00000016009) ALKAL1 (ENSCWAG00000015933) ST18 (ENSCWAG00000015832) PCMTD1 (ENSCWAG00000015794) #22 SNTG1 (ENSCWAG00000009208) SNAI2 (ENSCWAG00000008909) CLXN (ENSCWAG00000008778) Laurasiatheria_b ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Carnivora ANCESTRAL SPECIES 22 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Felidae ANCESTRAL SPECIES 22 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT01070000254546 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Panthera ANCESTRAL SPECIES 16 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT01070000254546 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654.c ENSGT00940000164631 Tiger MODERN SPECIES 228 ST18 (ENSPTIG00000007462) PCMTD1 (ENSPTIG00000007489) #22 PXDNL (ENSPTIG00000007514) SNTG1 (ENSPTIG00000007547) PPDPFL (ENSPTIG00000007585) SNAI2 (ENSPTIG00000007593) CLXN (ENSPTIG00000007607) ENSPTIG00000007639 MCM4 (ENSPTIG00000007651) PRKDC (ENSPTIG00000007716) ENSPTIG00000007924 ENSPTIG00000007935 ENSPTIG00000007957 Panthera_a ANCESTRAL SPECIES 16 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT01070000254546 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654.c ENSGT00940000164631 leopard MODERN SPECIES 121 ST18 (ENSPPRG00000011977) PCMTD1 (ENSPPRG00000011991) #22 PXDNL (ENSPPRG00000012276) SNTG1 (ENSPPRG00000012472) PPDPFL (ENSPPRG00000012538) SNAI2 (ENSPPRG00000012562) CLXN (ENSPPRG00000012598) ENSPPRG00000012662 MCM4 (ENSPPRG00000012715) ENSPPRG00000012728 PRKDC (ENSPPRG00000013209) CEBPD (ENSPPRG00000011305) ENSPPRG00000013441 ENSPPRG00000013556 lion MODERN SPECIES 509 XKR4 (ENSPLOG00000000434) ENSPLOG00000000462 SOX17 (ENSPLOG00000000493) ENSPLOG00000000502 MRPL15 (ENSPLOG00000000514) LYPLA1 (ENSPLOG00000000564) TCEA1 (ENSPLOG00000000655) ENSPLOG00000000706 ATP6V1H (ENSPLOG00000000736) OPRK1 (ENSPLOG00000000775) NPBWR1 (ENSPLOG00000000787) RB1CC1 (ENSPLOG00000000813) ALKAL1 (ENSPLOG00000000852) ENSPLOG00000000875 ST18 (ENSPLOG00000000893) PCMTD1 (ENSPLOG00000000934) #22 PXDNL (ENSPLOG00000000964) SNTG1 (ENSPLOG00000001368) PPDPFL (ENSPLOG00000001983) SNAI2 (ENSPLOG00000001998) CLXN (ENSPLOG00000002026) ENSPLOG00000002058 UBE2V2 (ENSPLOG00000002069) ENSPLOG00000002087 MCM4 (ENSPLOG00000002136) PRKDC (ENSPLOG00000002399) CEBPD (ENSPLOG00000002729) ENSPLOG00000002740 Cat MODERN SPECIES 249 TMEM68 (ENSFCAG00000011477) XKR4 (ENSFCAG00000008909) RP1 (ENSFCAG00000028934) SOX17 (ENSFCAG00000045851) ENSFCAG00000039931 MRPL15 (ENSFCAG00000033969) LYPLA1 (ENSFCAG00000023494) TCEA1 (ENSFCAG00000014436) ENSFCAG00000014408 ATP6V1H (ENSFCAG00000014405) OPRK1 (ENSFCAG00000013774) NPBWR1 (ENSFCAG00000040203) RB1CC1 (ENSFCAG00000010353) ALKAL1 (ENSFCAG00000041171) ST18 (ENSFCAG00000008556) PCMTD1 (ENSFCAG00000001192) #22 ENSFCAG00000052760 PXDNL (ENSFCAG00000005332) ENSFCAG00000031910 SNTG1 (ENSFCAG00000033157) PPDPFL (ENSFCAG00000043976) ENSFCAG00000015779 CLXN (ENSFCAG00000008555) ENSFCAG00000034272 MCM4 (ENSFCAG00000011378) PRKDC (ENSFCAG00000011374) CEBPD (ENSFCAG00000040821) SPIDR (ENSFCAG00000012472) ENSFCAG00000052602 Caniformia ANCESTRAL SPECIES 23 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Canidae ANCESTRAL SPECIES 42 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D Red fox MODERN SPECIES 3 ENSVVUG00000017810 XKR4 (ENSVVUG00000017809) ENSVVUG00000017799 RP1 (ENSVVUG00000017796) ENSVVUG00000017795 MRPL15 (ENSVVUG00000017791) TCEA1 (ENSVVUG00000017781) ENSVVUG00000017778 ATP6V1H (ENSVVUG00000017772) ENSVVUG00000017766 ENSVVUG00000017765 OPRK1 (ENSVVUG00000017764) NPBWR1 (ENSVVUG00000017761) RB1CC1 (ENSVVUG00000017756) ST18 (ENSVVUG00000017692) PCMTD1 (ENSVVUG00000017671) #22 PXDNL (ENSVVUG00000017649) SNTG1 (ENSVVUG00000017641) SNAI2 (ENSVVUG00000017625) EFCAB1 (ENSVVUG00000017607) UBE2V2 (ENSVVUG00000017601) MCM4 (ENSVVUG00000016856) PRKDC (ENSVVUG00000014714) Canis_lupus ANCESTRAL SPECIES 37 ENSGT00940000153525.h.c.a ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.e ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000154037.B.`b.a.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D Dingo MODERN SPECIES 30 ENSCAFG00020015460 ENSCAFG00020015458 LYPLA1 (ENSCAFG00020015455) TCEA1 (ENSCAFG00020015451) RGS20 (ENSCAFG00020015450) ATP6V1H (ENSCAFG00020015448) ENSCAFG00020015447 OPRK1 (ENSCAFG00020015444) NPBWR1 (ENSCAFG00020015443) ENSCAFG00020015442 ENSCAFG00020015441 ENSCAFG00020015440 RB1CC1 (ENSCAFG00020015438) ALKAL1 (ENSCAFG00020015436) ST18 (ENSCAFG00020015423) PCMTD1 (ENSCAFG00020015421) #22 PXDNL (ENSCAFG00020015420) SNTG1 (ENSCAFG00020015399) ENSCAFG00020015388 SNAI2 (ENSCAFG00020015384) CLXN (ENSCAFG00020015379) ENSCAFG00020015372 UBE2V2 (ENSCAFG00020015367) ENSCAFG00020015365 MCM4 (ENSCAFG00020015359) PRKDC (ENSCAFG00020015315) Dog MODERN SPECIES 21 XKR4 (ENSCAFG00845026228) RP1 (ENSCAFG00845026159) SOX17 (ENSCAFG00845026119) MRPL15 (ENSCAFG00845026048) TCEA1 (ENSCAFG00845025526) RGS20 (ENSCAFG00845025319) ATP6V1H (ENSCAFG00845024911) ENSCAFG00845024824 OPRK1 (ENSCAFG00845024764) NPBWR1 (ENSCAFG00845024737) RPSA (ENSCAFG00845024673) ENSCAFG00845024539 RB1CC1 (ENSCAFG00845024092) ENSCAFG00845024001 ST18 (ENSCAFG00845029327) PCMTD1 (ENSCAFG00845029271) #22 PXDNL (ENSCAFG00845029236) ENSCAFG00845029197 SNTG1 (ENSCAFG00845028965) PPDPFL (ENSCAFG00845028586) SNAI2 (ENSCAFG00845028533) EFCAB1 (ENSCAFG00845028482) ENSCAFG00845028428 ENSCAFG00845028412 UBE2V2 (ENSCAFG00845028369) MCM4 (ENSCAFG00845028253) PRKDC (ENSCAFG00845027748) Caniformia_b ANCESTRAL SPECIES 22 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT01090000260046.d ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Mustelinae ANCESTRAL SPECIES 209 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 American mink MODERN SPECIES 415 RB1CC1 (ENSNVIG00000024449) ALKAL1 (ENSNVIG00000024444) ST18 (ENSNVIG00000024442) PCMD1 (ENSNVIG00000024441) #22 Ferret MODERN SPECIES 410 NPBWR1 (ENSMPUG00000020005) RB1CC1 (ENSMPUG00000006947) ST18 (ENSMPUG00000006922) PCMTD1 (ENSMPUG00000006912) #22 PXDNL (ENSMPUG00000006895) ENSMPUG00000006836 Ursidae ANCESTRAL SPECIES 56 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT01090000260046.d ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00940000166869.b ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Giant Panda MODERN SPECIES 470 ENSAMEG00000027380 SOX17 (ENSAMEG00000025308) MRPL15 (ENSAMEG00000012437) LYPLA1 (ENSAMEG00000012413) TCEA1 (ENSAMEG00000012370) RGS20 (ENSAMEG00000012358) ATP6V1H (ENSAMEG00000012340) OPRK1 (ENSAMEG00000000914) ENSAMEG00000000916 NPBWR1 (ENSAMEG00000019245) ENSAMEG00000027572 RB1CC1 (ENSAMEG00000009073) ALKAL1 (ENSAMEG00000023742) ST18 (ENSAMEG00000015014) ENSAMEG00000024811 PCMTD1 (ENSAMEG00000015031) #22 PXDNL (ENSAMEG00000015038) SNTG1 (ENSAMEG00000009598) PPDPFL (ENSAMEG00000026535) SNAI2 (ENSAMEG00000009606) CLXN (ENSAMEG00000001642) ENSAMEG00000001652 UBE2V2 (ENSAMEG00000001644) MCM4 (ENSAMEG00000001634) PRKDC (ENSAMEG00000000249) ENSAMEG00000027341 ENSAMEG00000000243 ENSAMEG00000027002 ENSAMEG00000027755 ENSAMEG00000012968 ENSAMEG00000005606 Ursus ANCESTRAL SPECIES 110 ENSGT00390000018056 ENSGT00390000011782 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00940000166869.b ENSGT00950000183032.A.a #22 Polar bear MODERN SPECIES 296 TGS1 (ENSUMAG00000009761) TMEM68 (ENSUMAG00000009752) ENSUMAG00000009732 ENSUMAG00000009720 MRPL15 (ENSUMAG00000009710) LYPLA1 (ENSUMAG00000009670) TCEA1 (ENSUMAG00000009581) RGS20 (ENSUMAG00000009575) ATP6V1H (ENSUMAG00000009570) OPRK1 (ENSUMAG00000009564) NPBWR1 (ENSUMAG00000009560) RB1CC1 (ENSUMAG00000009553) ENSUMAG00000009546 ST18 (ENSUMAG00000009506) ENSUMAG00000009493 PCMTD1 (ENSUMAG00000009488) #22 American black bear DUPLICATION American black bear MODERN SPECIES 9147 ENSUAMG00000000215 #22 American black bear MODERN SPECIES 1554 ST18 (ENSUAMG00000027282) ENSUAMG00000027280 ENSUAMG00000027261 #22 Laurasiatheria_c ANCESTRAL SPECIES 19 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Chiroptera ANCESTRAL SPECIES 42 ENSGT00940000158011 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a Microchiroptera ANCESTRAL SPECIES 41 ENSGT00940000158011 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 5 ENSRFEG00010008656 XKR4 (ENSRFEG00010008664) ENSRFEG00010008703 ENSRFEG00010008837 RP1 (ENSRFEG00010008854) SOX17 (ENSRFEG00010008892) ENSRFEG00010008939 TCEA1 (ENSRFEG00010009037) RGS20 (ENSRFEG00010009394) ENSRFEG00010009490 ATP6V1H (ENSRFEG00010009527) OPRK1 (ENSRFEG00010009620) NPBWR1 (ENSRFEG00010009636) RB1CC1 (ENSRFEG00010009654) ST18 (ENSRFEG00010009724) ENSRFEG00010009897 #22 SNTG1 (ENSRFEG00010010115) ENSRFEG00010012270 SETSIP (ENSRFEG00010012378) PPDPFL (ENSRFEG00010012401) ENSRFEG00010012447 CLXN (ENSRFEG00010012494) ENSRFEG00010012650 ENSRFEG00010012735 MCM4 (ENSRFEG00010012774) PRKDC (ENSRFEG00010012932) CEBPD (ENSRFEG00010013042) SPIDR (ENSRFEG00010013063) ENSRFEG00010013158 ENSRFEG00010013177 LRRC69 (ENSRFEG00010013404) Greater horseshoe bat MODERN SPECIES 21 SLC35A1 (ENSRFEG00010001005) CFAP206 (ENSRFEG00010000973) C6orf163 (ENSRFEG00010000936) SMIM8 (ENSRFEG00010000921) GJB7 (ENSRFEG00010000902) ENSRFEG00010000874 CGA (ENSRFEG00010000864) HTR1E (ENSRFEG00010000854) ENSRFEG00010000844 ENSRFEG00010000834 SYNCRIP (ENSRFEG00010000799) SNX14 (ENSRFEG00010000634) NT5E (ENSRFEG00010000563) TBX18 (ENSRFEG00010000544) CEP162 (ENSRFEG00010000508) ENSRFEG00010000456 #22 ENSRFEG00010000425 MRAP2 (ENSRFEG00010000396) CYB5R4 (ENSRFEG00010000331) ENSRFEG00010000287 SNAP91 (ENSRFEG00010000204) PRSS35 (ENSRFEG00010018223) ME1 (ENSRFEG00010018174) RWDD2A (ENSRFEG00010018143) PGM3 (ENSRFEG00010017991) DOP1A (ENSRFEG00010017862) UBE3D (ENSRFEG00010017799) ENSRFEG00010017782 TPBG (ENSRFEG00010017768) IBTK (ENSRFEG00010017635) TENT5A (ENSRFEG00010017526) Microbat MODERN SPECIES 1050 SLA (ENSMLUG00000011145) PHF20L1 (ENSMLUG00000001525) ENSMLUG00000030437 TMEM71 (ENSMLUG00000001510) DNAAF11 (ENSMLUG00000008252) ENSMLUG00000015388 ENSMLUG00000022216 ADCY8 (ENSMLUG00000012194) ASAP1 (ENSMLUG00000009025) CYRIB (ENSMLUG00000011305) ENSMLUG00000008520 ENSMLUG00000026948 ENSMLUG00000029252 ENSMLUG00000027632 MYC (ENSMLUG00000026933) PCMTD1 (ENSMLUG00000002277) #22 SNTG1 (ENSMLUG00000011379) OTUD6B (ENSMLUG00000016954) ENSMLUG00000023522 SLC26A7 (ENSMLUG00000003742) RUNX1T1 (ENSMLUG00000004595) Megabat MODERN SPECIES 7104 PCMTD1 (ENSPVAG00000010682) #22 Equus ANCESTRAL SPECIES 14 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000156113 ENSGT00390000006658.a.b ENSGT00390000000521 ENSGT00940000153801.b ENSGT00950000183108.b.a.b ENSGT00390000007813 ENSGT00950000183131.b.a Horse MODERN SPECIES 30 MRPL15 (ENSECAG00000012110) LYPLA1 (ENSECAG00000016530) ENSECAG00000052889 TCEA1 (ENSECAG00000013436) ENSECAG00000050151 RGS20 (ENSECAG00000018510) ENSECAG00000044966 ATP6V1H (ENSECAG00000024159) OPRK1 (ENSECAG00000014442) ENSECAG00000047787 NPBWR1 (ENSECAG00000005077) RB1CC1 (ENSECAG00000017579) ALKAL1 (ENSECAG00000039026) ENSECAG00000058919 ENSECAG00000053325 PCMTD1 (ENSECAG00000022204) #22 ENSECAG00000053013 PXDNL (ENSECAG00000022817) ENSECAG00000019962 SNTG1 (ENSECAG00000000087) ENSECAG00000000401 ENSECAG00000056104 ENSECAG00000051290 PPDPFL (ENSECAG00000040755) SNAI2 (ENSECAG00000010120) CLXN (ENSECAG00000014162) UBE2V2 (ENSECAG00000027910) MCM4 (ENSECAG00000019276) PRKDC (ENSECAG00000020168) ENSECAG00000051008 ENSECAG00000056081 Donkey MODERN SPECIES 3 ENSEASG00005035435 ENSEASG00005027512 ENSEASG00005035589 ENSEASG00005029551 LYPLA1 (ENSEASG00005020322) TCEA1 (ENSEASG00005020313) RGS20 (ENSEASG00005020310) ATP6V1H (ENSEASG00005020298) ENSEASG00005026860 ENSEASG00005009805 OPRK1 (ENSEASG00005026342) NPBWR1 (ENSEASG00005020280) RB1CC1 (ENSEASG00005020230) ALKAL1 (ENSEASG00005020213) ST18 (ENSEASG00005020200) PCMTD1 (ENSEASG00005020195) #22 SNTG1 (ENSEASG00005020185) PPDPFL (ENSEASG00005024997) ENSEASG00005009186 CLXN (ENSEASG00005009190) UBE2V2 (ENSEASG00005024827) MCM4 (ENSEASG00005009194) ENSEASG00005035234 ENSEASG00005037902 PRKDC (ENSEASG00005009458) ENSEASG00005011359 ENSEASG00005011360 ENSEASG00005030668 ENSEASG00005027435 ENSEASG00005014064 OSGIN2 (ENSEASG00005028467) Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183032.A.a #22 Hedgehog MODERN SPECIES 8150 PCMTD1 (ENSEEUG00000001971) #22 Common shrew MODERN SPECIES 6416 ENSSARG00000008741 #22