Chordata ANCESTRAL SPECIES 177 ENSGT00950000183032.A.a #22 ENSGT00390000011620 Vertebrata ANCESTRAL SPECIES ENSGT00950000183032.A.a #22 Gnathostomata ANCESTRAL SPECIES 238 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000155393.c.b ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969 ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a Euteleostomi ANCESTRAL SPECIES 8 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00940000153804.A ENSGT00940000155086.A ENSGT00940000166976 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 Sarcopterygii ANCESTRAL SPECIES 3 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00940000153804.A ENSGT00940000155086.A ENSGT00940000166976 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 ENSGT00940000159556 Amniota ANCESTRAL SPECIES 3 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00990000204685 ENSGT00940000164631 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a Mammalia ANCESTRAL SPECIES 3 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 Theria ANCESTRAL SPECIES 7 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.e.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Eutheria ANCESTRAL SPECIES 15 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Boreoeutheria ANCESTRAL SPECIES 19 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Laurasiatheria ANCESTRAL SPECIES 18 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Laurasiatheria_a ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Artiodactyla ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Artiodactyla_a ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Camelidae ANCESTRAL SPECIES 77 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D Alpaca MODERN SPECIES 1809 ENSVPAG00000011828 #22 Arabian camel MODERN SPECIES 21 RPS20 (ENSCDRG00005020230) LYN (ENSCDRG00005020208) TGS1 (ENSCDRG00005020178) TMEM68 (ENSCDRG00005020157) ENSCDRG00005020056 SOX17 (ENSCDRG00005020040) MRPL15 (ENSCDRG00005020012) LYPLA1 (ENSCDRG00005019997) TCEA1 (ENSCDRG00005019946) ENSCDRG00005019928 ATP6V1H (ENSCDRG00005019870) OPRK1 (ENSCDRG00005019845) NPBWR1 (ENSCDRG00005019836) ALKAL1 (ENSCDRG00005019754) ST18 (ENSCDRG00005019658) PCMTD1 (ENSCDRG00005019634) #22 ENSCDRG00005019605 ENSCDRG00005019593 SNAI2 (ENSCDRG00005019580) CLXN (ENSCDRG00005019552) UBE2V2 (ENSCDRG00005019522) MCM4 (ENSCDRG00005019348) PRKDC (ENSCDRG00005009363) ENSCDRG00005008972 Artiodactyla_b ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Cetacea ANCESTRAL SPECIES 17 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 Odontoceti ANCESTRAL SPECIES 20 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121.n ENSGT00940000155121.m.b ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Odontoceti_a ANCESTRAL SPECIES 17 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121.n ENSGT00940000155121.m.a ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121.m.a ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Monodontidae ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.h ENSGT00940000155121.m.a ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Narwhal MODERN SPECIES 300 TMEM68 (ENSMMNG00015015221) XKR4 (ENSMMNG00015015264) ENSMMNG00015015277 RP1 (ENSMMNG00015015294) SOX17 (ENSMMNG00015015308) MRPL15 (ENSMMNG00015015322) LYPLA1 (ENSMMNG00015015363) ENSMMNG00015015524 RGS20 (ENSMMNG00015015612) ATP6V1H (ENSMMNG00015015669) OPRK1 (ENSMMNG00015015726) NPBWR1 (ENSMMNG00015015745) RB1CC1 (ENSMMNG00015015771) ALKAL1 (ENSMMNG00015015819) ST18 (ENSMMNG00015015870) PCMTD1 (ENSMMNG00015015912) #22 ENSMMNG00015015939 SNTG1 (ENSMMNG00015016248) PPDPFL (ENSMMNG00015017304) SNAI2 (ENSMMNG00015017362) CLXN (ENSMMNG00015017393) ENSMMNG00015017447 MCM4 (ENSMMNG00015017615) PRKDC (ENSMMNG00015018377) CEBPD (ENSMMNG00015019866) SPIDR (ENSMMNG00015019877) Beluga whale MODERN SPECIES 47 ENSDLEG00000015141 RP1 (ENSDLEG00000015156) SOX17 (ENSDLEG00000015171) TPRKB (ENSDLEG00000015177) MRPL15 (ENSDLEG00000015181) ENSDLEG00000015196 ENSDLEG00000015212 ENSDLEG00000015221 ENSDLEG00000015228 RGS20 (ENSDLEG00000015243) ATP6V1H (ENSDLEG00000015265) OPRK1 (ENSDLEG00000015294) NPBWR1 (ENSDLEG00000015304) RB1CC1 (ENSDLEG00000015318) ST18 (ENSDLEG00000015349) PCMTD1 (ENSDLEG00000015382) #22 ENSDLEG00000015408 SNTG1 (ENSDLEG00000015417) SNAI2 (ENSDLEG00000015475) EFCAB1 (ENSDLEG00000015484) UBE2V2 (ENSDLEG00000015496) MCM4 (ENSDLEG00000015514) PRKDC (ENSDLEG00000016005) CEBPD (ENSDLEG00000020408) SPIDR (ENSDLEG00000020423) Vaquita MODERN SPECIES 8 XKR4 (ENSPSNG00000011695) ENSPSNG00000011669 ENSPSNG00000011608 RP1 (ENSPSNG00000011554) SOX17 (ENSPSNG00000011510) MRPL15 (ENSPSNG00000011469) ENSPSNG00000011338 ENSPSNG00000011078 RGS20 (ENSPSNG00000010954) ATP6V1H (ENSPSNG00000010849) OPRK1 (ENSPSNG00000010750) NPBWR1 (ENSPSNG00000020139) RB1CC1 (ENSPSNG00000020100) ALKAL1 (ENSPSNG00000020029) ST18 (ENSPSNG00000019900) PCMTD1 (ENSPSNG00000019835) #22 ENSPSNG00000019801 SNTG1 (ENSPSNG00000018422) PPDPFL (ENSPSNG00000018058) SNAI2 (ENSPSNG00000018025) CLXN (ENSPSNG00000017935) ENSPSNG00000017756 MCM4 (ENSPSNG00000017171) PRKDC (ENSPSNG00000016032) CEBPD (ENSPSNG00000015718) SPIDR (ENSPSNG00000015635) Dolphin MODERN SPECIES 6619 PCMTD1 (ENSTTRG00000007943) #22 Sperm whale MODERN SPECIES 6 TMEM68 (ENSPCTG00005007220) ENSPCTG00005007335 RP1 (ENSPCTG00005007366) SOX17 (ENSPCTG00005007395) ENSPCTG00005007411 MRPL15 (ENSPCTG00005007420) LYPLA1 (ENSPCTG00005007458) TCEA1 (ENSPCTG00005007517) RGS20 (ENSPCTG00005007671) ATP6V1H (ENSPCTG00005007732) OPRK1 (ENSPCTG00005007828) NPBWR1 (ENSPCTG00005007847) RB1CC1 (ENSPCTG00005007860) ALKAL1 (ENSPCTG00005007890) ST18 (ENSPCTG00005007942) PCMTD1 (ENSPCTG00005008026) #22 SNTG1 (ENSPCTG00005008190) PPDPFL (ENSPCTG00005011221) SNAI2 (ENSPCTG00005011333) EFCAB1 (ENSPCTG00005011370) UBE2V2 (ENSPCTG00005011488) MCM4 (ENSPCTG00005011558) PRKDC (ENSPCTG00005012331) CEBPD (ENSPCTG00005017828) ENSPCTG00005017855 Blue whale MODERN SPECIES 8 XKR4 (ENSBMSG00010015591) ENSBMSG00010015625 RP1 (ENSBMSG00010015672) SOX17 (ENSBMSG00010015701) MRPL15 (ENSBMSG00010015731) LYPLA1 (ENSBMSG00010015788) TCEA1 (ENSBMSG00010015953) RGS20 (ENSBMSG00010016086) ATP6V1H (ENSBMSG00010016209) OPRK1 (ENSBMSG00010016297) ENSBMSG00010016334 NPBWR1 (ENSBMSG00010016365) RB1CC1 (ENSBMSG00010016414) ALKAL1 (ENSBMSG00010016599) ST18 (ENSBMSG00010016711) PCMTD1 (ENSBMSG00010016806) #22 SNTG1 (ENSBMSG00010017144) PPDPFL (ENSBMSG00010020986) SNAI2 (ENSBMSG00010021014) CLXN (ENSBMSG00010021037) UBE2V2 (ENSBMSG00010021065) MCM4 (ENSBMSG00010021185) PRKDC (ENSBMSG00010021768) CEBPD (ENSBMSG00010022251) ENSBMSG00010022252 ENSBMSG00010022256 Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000163032 ENSGT01030000235502 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Yarkand deer MODERN SPECIES 13 XKR4 (ENSCHYG00000023732) ENSCHYG00000023702 SOX17 (ENSCHYG00000023663) MRPL15 (ENSCHYG00000023624) LYPLA1 (ENSCHYG00000023356) ENSCHYG00000022967 RGS20 (ENSCHYG00000022852) ATP6V1H (ENSCHYG00000022766) OPRK1 (ENSCHYG00000022698) NPBWR1 (ENSCHYG00000022686) RB1CC1 (ENSCHYG00000022542) ALKAL1 (ENSCHYG00000022488) ENSCHYG00000022445 ENSCHYG00000022400 ST18 (ENSCHYG00000021991) PCMTD1 (ENSCHYG00000021921) #22 ENSCHYG00000021851 SNTG1 (ENSCHYG00000020644) ENSCHYG00000020498 PPDPFL (ENSCHYG00000020457) SNAI2 (ENSCHYG00000020385) CLXN (ENSCHYG00000020174) UBE2V2 (ENSCHYG00000020085) MCM4 (ENSCHYG00000019115) PRKDC (ENSCHYG00000016168) ENSCHYG00000015631 ENSCHYG00000015611 SPIDR (ENSCHYG00000015121) CEBPD (ENSCHYG00000015055) ENSCHYG00000015002 ENSCHYG00000014945 Percora_a ANCESTRAL SPECIES 23 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000163032 ENSGT01030000235502 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Siberian musk deer MODERN SPECIES 181 TMEM68 (ENSMMSG00000018879) XKR4 (ENSMMSG00000018988) ENSMMSG00000019022 SOX17 (ENSMMSG00000019055) ENSMMSG00000019067 LYPLA1 (ENSMMSG00000019125) TCEA1 (ENSMMSG00000019249) RGS20 (ENSMMSG00000019413) ATP6V1H (ENSMMSG00000019499) OPRK1 (ENSMMSG00000019585) ENSMMSG00000019617 NPBWR1 (ENSMMSG00000019656) RB1CC1 (ENSMMSG00000019672) ALKAL1 (ENSMMSG00000019751) ST18 (ENSMMSG00000019802) ENSMMSG00000019886 #22 SNTG1 (ENSMMSG00000020088) Bovidae ANCESTRAL SPECIES 22 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000163032 ENSGT01030000235502 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Bovinae ANCESTRAL SPECIES 18 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000010130.f ENSGT00390000003289.g.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000002144.i.b ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb.fb.b ENSGT00390000014654 ENSGT00940000163032 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Bos ANCESTRAL SPECIES 21 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000010130.f ENSGT00390000003289.g.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000002144.i.b ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb.fb.b ENSGT00390000014654 ENSGT00940000163032 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b.h ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Bos_a ANCESTRAL SPECIES 92 ENSGT00940000154242.b ENSGT00390000009040.a ENSGT00940000154185.f.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000010130.f ENSGT00390000003289.g.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000002144.i.b ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb.fb.b ENSGT00390000014654 ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b.h Wild yak MODERN SPECIES 452 ENSBMUG00000013408 ENSBMUG00000013395 ENSBMUG00000013385 TCEA1 (ENSBMUG00000013369) RGS20 (ENSBMUG00000013345) ENSBMUG00000013322 ATP6V1H (ENSBMUG00000013251) OPRK1 (ENSBMUG00000013163) NPBWR1 (ENSBMUG00000013137) RB1CC1 (ENSBMUG00000013120) ENSBMUG00000013083 ENSBMUG00000013069 ENSBMUG00000013053 ST18 (ENSBMUG00000013031) PCMTD1 (ENSBMUG00000012986) #22 ENSBMUG00000012936 SNTG1 (ENSBMUG00000011959) ENSBMUG00000011359 SNAI2 (ENSBMUG00000011335) CLXN (ENSBMUG00000011311) UBE2V2 (ENSBMUG00000011242) MCM4 (ENSBMUG00000011227) PRKDC (ENSBMUG00000011197) ENSBMUG00000010962 SPIDR (ENSBMUG00000010938) ENSBMUG00000010902 ENSBMUG00000010886 ENSBMUG00000010853 ENSBMUG00000010840 ENSBMUG00000010821 Bos_b ANCESTRAL SPECIES 25 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000010130.f ENSGT00390000003289.g.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb.fb.b ENSGT00390000014654 ENSGT00940000163032 ENSGT00960000186612.B.a.a.d ENSGT00940000162302 ENSGT00940000165552 ENSGT00390000010337.B.a.b.h ENSGT00950000182893.a.a.a.b Cow MODERN SPECIES 5 XKR4 (ENSBTAG00000044050) RP1 (ENSBTAG00000011203) SOX17 (ENSBTAG00000005748) ENSBTAG00000052277 MRPL15 (ENSBTAG00000001174) LYPLA1 (ENSBTAG00000004243) TCEA1 (ENSBTAG00000003460) RGS20 (ENSBTAG00000003454) ENSBTAG00000054835 ATP6V1H (ENSBTAG00000003450) OPRK1 (ENSBTAG00000000914) NPBWR1 (ENSBTAG00000016159) RB1CC1 (ENSBTAG00000000878) ENSBTAG00000048814 ST18 (ENSBTAG00000005560) PCMTD1 (ENSBTAG00000017492) #22 SNTG1 (ENSBTAG00000002448) ENSBTAG00000027760 PPDPFL (ENSBTAG00000038286) SNAI2 (ENSBTAG00000013227) CLXN (ENSBTAG00000008693) UBE2V2 (ENSBTAG00000023218) MCM4 (ENSBTAG00000017021) PRKDC (ENSBTAG00000017019) H3-5 (ENSBTAG00000017016) SPIDR (ENSBTAG00000044106) CEBPD (ENSBTAG00000046307) ENSBTAG00000040351 ENSBTAG00000054983 ENSBTAG00000009474 HAS2 (ENSBTAG00000019892) Hybrid Bos Indicus MODERN SPECIES 5 ENSBIXG00005023590 ENSBIXG00005004065 TCEA1 (ENSBIXG00005023901) RGS20 (ENSBIXG00005004106) ENSBIXG00005023996 ENSBIXG00005004122 ENSBIXG00005024120 OPRK1 (ENSBIXG00005024194) NPBWR1 (ENSBIXG00005024209) RB1CC1 (ENSBIXG00005024270) ALKAL1 (ENSBIXG00005024331) ENSBIXG00005024381 ST18 (ENSBIXG00005024438) ENSBIXG00005004177 ENSBIXG00005024471 PCMTD1 (ENSBIXG00005004184) #22 ENSBIXG00005004193 SNTG1 (ENSBIXG00005024969) ENSBIXG00005025067 ENSBIXG00005025099 SNAI2 (ENSBIXG00005025145) CLXN (ENSBIXG00005025221) ENSBIXG00005025298 MCM4 (ENSBIXG00005025814) PRKDC (ENSBIXG00005026568) ENSBIXG00005026643 SPIDR (ENSBIXG00005004566) CEBPD (ENSBIXG00005026750) ENSBIXG00005026755 ENSBIXG00005026768 ENSBIXG00005026793 American bison MODERN SPECIES 3036 XKR4 (ENSBBBG00000004357) RP1 (ENSBBBG00000008007) ENSBBBG00000017605 ENSBBBG00000008932 TCEA1 (ENSBBBG00000004377) RGS20 (ENSBBBG00000017756) ENSBBBG00000006782 ENSBBBG00000004389 OPRK1 (ENSBBBG00000017852) NPBWR1 (ENSBBBG00000017860) RB1CC1 (ENSBBBG00000017917) ALKAL1 (ENSBBBG00000004408) ENSBBBG00000017946 ENSBBBG00000004417 ST18 (ENSBBBG00000017983) ENSBBBG00000004427 #22 SNTG1 (ENSBBBG00000018671) PPDPFL (ENSBBBG00000018734) SNAI2 (ENSBBBG00000018743) CLXN (ENSBBBG00000018768) UBE2V2 (ENSBBBG00000018781) MCM4 (ENSBBBG00000018801) PRKDC (ENSBBBG00000004878) ENSBBBG00000019084 SPIDR (ENSBBBG00000019113) ENSBBBG00000019149 ENSBBBG00000019155 ENSBBBG00000004933 ENSBBBG00000019172 ZHX2 (ENSBBBG00000008388) DERL1 (ENSBBBG00000019213) Caprinae ANCESTRAL SPECIES 18 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.a ENSGT00940000154185.f ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00390000007918.g.b ENSGT00940000159905 ENSGT00950000183032.A.a.g.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT01100000263504.a.a.yb ENSGT00390000014654 ENSGT00940000163032 ENSGT01030000235502 ENSGT00940000162302 ENSGT00390000010337.B.a.b.k.b ENSGT00950000182893.a.a.a.b ENSGT00530000063156.b Rambouillet Sheep MODERN SPECIES 25 TMEM68 (ENSOARG00020025479) XKR4 (ENSOARG00020025470) RP1 (ENSOARG00020025463) SOX17 (ENSOARG00020025457) MRPL15 (ENSOARG00020025448) LYPLA1 (ENSOARG00020025402) TCEA1 (ENSOARG00020025361) RGS20 (ENSOARG00020025341) ATP6V1H (ENSOARG00020025312) OPRK1 (ENSOARG00020025297) NPBWR1 (ENSOARG00020025293) RB1CC1 (ENSOARG00020025223) ALKAL1 (ENSOARG00020025195) ENSOARG00020025180 ST18 (ENSOARG00020025124) PCMTD1 (ENSOARG00020025108) #22 SNTG1 (ENSOARG00020024728) PPDPFL (ENSOARG00020024587) SNAI2 (ENSOARG00020024572) CLXN (ENSOARG00020024519) MCM4 (ENSOARG00020024419) PRKDC (ENSOARG00020010704) ENSOARG00020009951 CEBPD (ENSOARG00020009877) ENSOARG00020016702 ENSOARG00020016522 HAS2 (ENSOARG00020016454) ENSOARG00020016416 ZHX2 (ENSOARG00020016397) DERL1 (ENSOARG00020016190) TBC1D31 (ENSOARG00020015866) Goat MODERN SPECIES 5 TMEM68 (ENSCHIG00000023378) XKR4 (ENSCHIG00000012863) RP1 (ENSCHIG00000024939) SOX17 (ENSCHIG00000020928) ENSCHIG00000000811 ENSCHIG00000009109 ENSCHIG00000022556 RGS20 (ENSCHIG00000006425) ATP6V1H (ENSCHIG00000016415) OPRK1 (ENSCHIG00000023230) NPBWR1 (ENSCHIG00000010898) RB1CC1 (ENSCHIG00000017614) ENSCHIG00000027047 ENSCHIG00000015420 ST18 (ENSCHIG00000013632) ENSCHIG00000024195 #22 ENSCHIG00000011128 ##22 SNTG1 (ENSCHIG00000023177) PPDPFL (ENSCHIG00000017544) SNAI2 (ENSCHIG00000024410) CLXN (ENSCHIG00000017174) ENSCHIG00000013718 MCM4 (ENSCHIG00000018094) PRKDC (ENSCHIG00000013822) ENSCHIG00000011570 SPIDR (ENSCHIG00000018290) CEBPD (ENSCHIG00000010420) ENSCHIG00000011893 ENSCHIG00000026116 ENSCHIG00000006578 ENSCHIG00000011424 Pecora ANCESTRAL SPECIES ENSGT00950000183032.A.a.g.b #22 Percora_a ANCESTRAL SPECIES ENSGT00950000183032.A.a.g.b #22 Siberian musk deer MODERN SPECIES 373 ZNF516 (ENSMMSG00000008709) ENSMMSG00000008670 ZNF236 (ENSMMSG00000008516) MBP (ENSMMSG00000008128) GALR1 (ENSMMSG00000008077) SALL3 (ENSMMSG00000007960) ATP9B (ENSMMSG00000007533) NFATC1 (ENSMMSG00000007403) CTDP1 (ENSMMSG00000007350) KCNG2 (ENSMMSG00000007319) SLC66A2 (ENSMMSG00000007214) HSBP1L1 (ENSMMSG00000007184) ENSMMSG00000007113 ENSMMSG00000007067 RBFA (ENSMMSG00000007047) ENSMMSG00000007032 #22 ENSMMSG00000007011 #22 ADNP2 (ENSMMSG00000006994) ENSMMSG00000006967 PARD6G (ENSMMSG00000006923) ENSMMSG00000006895 ENSMMSG00000006868 Bovidae ANCESTRAL SPECIES ENSGT00950000183032.A.a.g.b #22 Bovinae ANCESTRAL SPECIES ENSGT00950000183032.A.a.g.b #22 American bison MODERN SPECIES 10 ENSBBBG00000025392 #22 Pecora ANCESTRAL SPECIES ENSGT00950000183032.A.a.h #22 Percora_a ANCESTRAL SPECIES ENSGT00950000183032.A.a.h #22 Bovidae ANCESTRAL SPECIES ENSGT00950000183032.A.a.h #22 Caprinae ANCESTRAL SPECIES ENSGT00950000183032.A.a.h #22 Goat MODERN SPECIES 9 LRP3 (ENSCHIG00000012481) SLC7A10 (ENSCHIG00000023717) CEBPA (ENSCHIG00000011587) CEBPG (ENSCHIG00000008784) PEPD (ENSCHIG00000015514) CHST8 (ENSCHIG00000019583) KCTD15 (ENSCHIG00000023579) LSM14A (ENSCHIG00000009458) ENSCHIG00000008709 GARRE1 (ENSCHIG00000007746) GPI (ENSCHIG00000016122) PDCD2L (ENSCHIG00000024774) UBA2 (ENSCHIG00000014051) WTIP (ENSCHIG00000025695) ENSCHIG00000011644 ENSCHIG00000022635 #22 ENSCHIG00000013055 ENSCHIG00000024732 ENSCHIG00000009298 ENSCHIG00000021338 ENSCHIG00000014055 ZNF599 (ENSCHIG00000025528) ENSCHIG00000013449 ZNF792 (ENSCHIG00000025015) GRAMD1A (ENSCHIG00000019950) SCN1B (ENSCHIG00000026195) HPN (ENSCHIG00000023913) ENSCHIG00000012557 LGI4 (ENSCHIG00000005629) ENSCHIG00000027209 ENSCHIG00000014550 Siberian musk deer MODERN SPECIES 373 ENSMMSG00000008670 ZNF236 (ENSMMSG00000008516) MBP (ENSMMSG00000008128) GALR1 (ENSMMSG00000008077) SALL3 (ENSMMSG00000007960) ATP9B (ENSMMSG00000007533) NFATC1 (ENSMMSG00000007403) CTDP1 (ENSMMSG00000007350) KCNG2 (ENSMMSG00000007319) SLC66A2 (ENSMMSG00000007214) HSBP1L1 (ENSMMSG00000007184) ENSMMSG00000007113 ENSMMSG00000007067 RBFA (ENSMMSG00000007047) ENSMMSG00000007032 #22 ENSMMSG00000007011 #22 ADNP2 (ENSMMSG00000006994) ENSMMSG00000006967 PARD6G (ENSMMSG00000006923) ENSMMSG00000006895 ENSMMSG00000006868 Suina ANCESTRAL SPECIES 26 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Pig MODERN SPECIES 12 TGS1 (ENSSSCG00000006251) TMEM68 (ENSSSCG00000006252) XKR4 (ENSSSCG00000031813) RP1 (ENSSSCG00000042752) SOX17 (ENSSSCG00000060730) MRPL15 (ENSSSCG00000030578) LYPLA1 (ENSSSCG00000006260) TCEA1 (ENSSSCG00000006261) RGS20 (ENSSSCG00000006262) ATP6V1H (ENSSSCG00000006263) OPRK1 (ENSSSCG00000006264) NPBWR1 (ENSSSCG00000059721) RB1CC1 (ENSSSCG00000028902) ALKAL1 (ENSSSCG00000033922) ST18 (ENSSSCG00000006266) PCMTD1 (ENSSSCG00000006267) #22 SNTG1 (ENSSSCG00000034495) ENSSSCG00000045207 SNAI2 (ENSSSCG00000039568) CLXN (ENSSSCG00000032887) UBE2V2 (ENSSSCG00000022190) MCM4 (ENSSSCG00000006273) PRKDC (ENSSSCG00000006274) CEBPD (ENSSSCG00000032367) SPIDR (ENSSSCG00000006277) PRRX1 (ENSSSCG00000031503) GORAB (ENSSSCG00000006280) NTMT2 (ENSSSCG00000006281) KIFAP3 (ENSSSCG00000006282) SCYL3 (ENSSSCG00000006283) C1orf112 (ENSSSCG00000006284) Chacoan peccary MODERN SPECIES 840 TGS1 (ENSCWAG00000008274) TMEM68 (ENSCWAG00000008128) XKR4 (ENSCWAG00000008058) RP1 (ENSCWAG00000007943) SOX17 (ENSCWAG00000016827) MRPL15 (ENSCWAG00000016794) LYPLA1 (ENSCWAG00000016699) TCEA1 (ENSCWAG00000016391) RGS20 (ENSCWAG00000016261) ATP6V1H (ENSCWAG00000016149) OPRK1 (ENSCWAG00000016074) NPBWR1 (ENSCWAG00000016059) RB1CC1 (ENSCWAG00000016009) ALKAL1 (ENSCWAG00000015933) ST18 (ENSCWAG00000015832) PCMTD1 (ENSCWAG00000015794) #22 SNTG1 (ENSCWAG00000009208) SNAI2 (ENSCWAG00000008909) CLXN (ENSCWAG00000008778) Laurasiatheria_b ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Carnivora ANCESTRAL SPECIES 22 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Felidae ANCESTRAL SPECIES 22 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT01070000254546 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Panthera ANCESTRAL SPECIES 16 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT01070000254546 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654.c ENSGT00940000164631 Tiger MODERN SPECIES 228 ST18 (ENSPTIG00000007462) PCMTD1 (ENSPTIG00000007489) #22 PXDNL (ENSPTIG00000007514) SNTG1 (ENSPTIG00000007547) PPDPFL (ENSPTIG00000007585) SNAI2 (ENSPTIG00000007593) CLXN (ENSPTIG00000007607) ENSPTIG00000007639 MCM4 (ENSPTIG00000007651) PRKDC (ENSPTIG00000007716) ENSPTIG00000007924 ENSPTIG00000007935 ENSPTIG00000007957 Panthera_a ANCESTRAL SPECIES 16 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT01070000254546 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654.c ENSGT00940000164631 leopard MODERN SPECIES 121 ST18 (ENSPPRG00000011977) PCMTD1 (ENSPPRG00000011991) #22 PXDNL (ENSPPRG00000012276) SNTG1 (ENSPPRG00000012472) PPDPFL (ENSPPRG00000012538) SNAI2 (ENSPPRG00000012562) CLXN (ENSPPRG00000012598) ENSPPRG00000012662 MCM4 (ENSPPRG00000012715) ENSPPRG00000012728 PRKDC (ENSPPRG00000013209) CEBPD (ENSPPRG00000011305) ENSPPRG00000013441 ENSPPRG00000013556 lion MODERN SPECIES 509 XKR4 (ENSPLOG00000000434) ENSPLOG00000000462 SOX17 (ENSPLOG00000000493) ENSPLOG00000000502 MRPL15 (ENSPLOG00000000514) LYPLA1 (ENSPLOG00000000564) TCEA1 (ENSPLOG00000000655) ENSPLOG00000000706 ATP6V1H (ENSPLOG00000000736) OPRK1 (ENSPLOG00000000775) NPBWR1 (ENSPLOG00000000787) RB1CC1 (ENSPLOG00000000813) ALKAL1 (ENSPLOG00000000852) ENSPLOG00000000875 ST18 (ENSPLOG00000000893) PCMTD1 (ENSPLOG00000000934) #22 PXDNL (ENSPLOG00000000964) SNTG1 (ENSPLOG00000001368) PPDPFL (ENSPLOG00000001983) SNAI2 (ENSPLOG00000001998) CLXN (ENSPLOG00000002026) ENSPLOG00000002058 UBE2V2 (ENSPLOG00000002069) ENSPLOG00000002087 MCM4 (ENSPLOG00000002136) PRKDC (ENSPLOG00000002399) CEBPD (ENSPLOG00000002729) ENSPLOG00000002740 Cat MODERN SPECIES 249 TMEM68 (ENSFCAG00000011477) XKR4 (ENSFCAG00000008909) RP1 (ENSFCAG00000028934) SOX17 (ENSFCAG00000045851) ENSFCAG00000039931 MRPL15 (ENSFCAG00000033969) LYPLA1 (ENSFCAG00000023494) TCEA1 (ENSFCAG00000014436) ENSFCAG00000014408 ATP6V1H (ENSFCAG00000014405) OPRK1 (ENSFCAG00000013774) NPBWR1 (ENSFCAG00000040203) RB1CC1 (ENSFCAG00000010353) ALKAL1 (ENSFCAG00000041171) ST18 (ENSFCAG00000008556) PCMTD1 (ENSFCAG00000001192) #22 ENSFCAG00000052760 PXDNL (ENSFCAG00000005332) ENSFCAG00000031910 SNTG1 (ENSFCAG00000033157) PPDPFL (ENSFCAG00000043976) ENSFCAG00000015779 CLXN (ENSFCAG00000008555) ENSFCAG00000034272 MCM4 (ENSFCAG00000011378) PRKDC (ENSFCAG00000011374) CEBPD (ENSFCAG00000040821) SPIDR (ENSFCAG00000012472) ENSFCAG00000052602 Caniformia ANCESTRAL SPECIES 23 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Canidae ANCESTRAL SPECIES 42 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D Red fox MODERN SPECIES 3 ENSVVUG00000017810 XKR4 (ENSVVUG00000017809) ENSVVUG00000017799 RP1 (ENSVVUG00000017796) ENSVVUG00000017795 MRPL15 (ENSVVUG00000017791) TCEA1 (ENSVVUG00000017781) ENSVVUG00000017778 ATP6V1H (ENSVVUG00000017772) ENSVVUG00000017766 ENSVVUG00000017765 OPRK1 (ENSVVUG00000017764) NPBWR1 (ENSVVUG00000017761) RB1CC1 (ENSVVUG00000017756) ST18 (ENSVVUG00000017692) PCMTD1 (ENSVVUG00000017671) #22 PXDNL (ENSVVUG00000017649) SNTG1 (ENSVVUG00000017641) SNAI2 (ENSVVUG00000017625) EFCAB1 (ENSVVUG00000017607) UBE2V2 (ENSVVUG00000017601) MCM4 (ENSVVUG00000016856) PRKDC (ENSVVUG00000014714) Canis_lupus ANCESTRAL SPECIES 37 ENSGT00940000153525.h.c.a ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040.e ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000154037.B.`b.a.a ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D Dingo MODERN SPECIES 30 ENSCAFG00020015460 ENSCAFG00020015458 LYPLA1 (ENSCAFG00020015455) TCEA1 (ENSCAFG00020015451) RGS20 (ENSCAFG00020015450) ATP6V1H (ENSCAFG00020015448) ENSCAFG00020015447 OPRK1 (ENSCAFG00020015444) NPBWR1 (ENSCAFG00020015443) ENSCAFG00020015442 ENSCAFG00020015441 ENSCAFG00020015440 RB1CC1 (ENSCAFG00020015438) ALKAL1 (ENSCAFG00020015436) ST18 (ENSCAFG00020015423) PCMTD1 (ENSCAFG00020015421) #22 PXDNL (ENSCAFG00020015420) SNTG1 (ENSCAFG00020015399) ENSCAFG00020015388 SNAI2 (ENSCAFG00020015384) CLXN (ENSCAFG00020015379) ENSCAFG00020015372 UBE2V2 (ENSCAFG00020015367) ENSCAFG00020015365 MCM4 (ENSCAFG00020015359) PRKDC (ENSCAFG00020015315) Dog MODERN SPECIES 21 XKR4 (ENSCAFG00845026228) RP1 (ENSCAFG00845026159) SOX17 (ENSCAFG00845026119) MRPL15 (ENSCAFG00845026048) TCEA1 (ENSCAFG00845025526) RGS20 (ENSCAFG00845025319) ATP6V1H (ENSCAFG00845024911) ENSCAFG00845024824 OPRK1 (ENSCAFG00845024764) NPBWR1 (ENSCAFG00845024737) RPSA (ENSCAFG00845024673) ENSCAFG00845024539 RB1CC1 (ENSCAFG00845024092) ENSCAFG00845024001 ST18 (ENSCAFG00845029327) PCMTD1 (ENSCAFG00845029271) #22 PXDNL (ENSCAFG00845029236) ENSCAFG00845029197 SNTG1 (ENSCAFG00845028965) PPDPFL (ENSCAFG00845028586) SNAI2 (ENSCAFG00845028533) EFCAB1 (ENSCAFG00845028482) ENSCAFG00845028428 ENSCAFG00845028412 UBE2V2 (ENSCAFG00845028369) MCM4 (ENSCAFG00845028253) PRKDC (ENSCAFG00845027748) Caniformia_b ANCESTRAL SPECIES 22 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT01090000260046.d ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Mustelinae ANCESTRAL SPECIES 209 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 American mink MODERN SPECIES 415 RB1CC1 (ENSNVIG00000024449) ALKAL1 (ENSNVIG00000024444) ST18 (ENSNVIG00000024442) PCMD1 (ENSNVIG00000024441) #22 Ferret MODERN SPECIES 410 NPBWR1 (ENSMPUG00000020005) RB1CC1 (ENSMPUG00000006947) ST18 (ENSMPUG00000006922) PCMTD1 (ENSMPUG00000006912) #22 PXDNL (ENSMPUG00000006895) ENSMPUG00000006836 Ursidae ANCESTRAL SPECIES 56 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT01090000260046.d ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00940000166869.b ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Giant Panda MODERN SPECIES 470 ENSAMEG00000027380 SOX17 (ENSAMEG00000025308) MRPL15 (ENSAMEG00000012437) LYPLA1 (ENSAMEG00000012413) TCEA1 (ENSAMEG00000012370) RGS20 (ENSAMEG00000012358) ATP6V1H (ENSAMEG00000012340) OPRK1 (ENSAMEG00000000914) ENSAMEG00000000916 NPBWR1 (ENSAMEG00000019245) ENSAMEG00000027572 RB1CC1 (ENSAMEG00000009073) ALKAL1 (ENSAMEG00000023742) ST18 (ENSAMEG00000015014) ENSAMEG00000024811 PCMTD1 (ENSAMEG00000015031) #22 PXDNL (ENSAMEG00000015038) SNTG1 (ENSAMEG00000009598) PPDPFL (ENSAMEG00000026535) SNAI2 (ENSAMEG00000009606) CLXN (ENSAMEG00000001642) ENSAMEG00000001652 UBE2V2 (ENSAMEG00000001644) MCM4 (ENSAMEG00000001634) PRKDC (ENSAMEG00000000249) ENSAMEG00000027341 ENSAMEG00000000243 ENSAMEG00000027002 ENSAMEG00000027755 ENSAMEG00000012968 ENSAMEG00000005606 Ursus ANCESTRAL SPECIES 110 ENSGT00390000018056 ENSGT00390000011782 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00940000166869.b ENSGT00950000183032.A.a #22 Polar bear MODERN SPECIES 296 TGS1 (ENSUMAG00000009761) TMEM68 (ENSUMAG00000009752) ENSUMAG00000009732 ENSUMAG00000009720 MRPL15 (ENSUMAG00000009710) LYPLA1 (ENSUMAG00000009670) TCEA1 (ENSUMAG00000009581) RGS20 (ENSUMAG00000009575) ATP6V1H (ENSUMAG00000009570) OPRK1 (ENSUMAG00000009564) NPBWR1 (ENSUMAG00000009560) RB1CC1 (ENSUMAG00000009553) ENSUMAG00000009546 ST18 (ENSUMAG00000009506) ENSUMAG00000009493 PCMTD1 (ENSUMAG00000009488) #22 American black bear DUPLICATION American black bear MODERN SPECIES 9147 ENSUAMG00000000215 #22 American black bear MODERN SPECIES 1554 ST18 (ENSUAMG00000027282) ENSUAMG00000027280 ENSUAMG00000027261 #22 Laurasiatheria_c ANCESTRAL SPECIES 19 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Chiroptera ANCESTRAL SPECIES 42 ENSGT00940000158011 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a Microchiroptera ANCESTRAL SPECIES 41 ENSGT00940000158011 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 5 ENSRFEG00010008656 XKR4 (ENSRFEG00010008664) ENSRFEG00010008703 ENSRFEG00010008837 RP1 (ENSRFEG00010008854) SOX17 (ENSRFEG00010008892) ENSRFEG00010008939 TCEA1 (ENSRFEG00010009037) RGS20 (ENSRFEG00010009394) ENSRFEG00010009490 ATP6V1H (ENSRFEG00010009527) OPRK1 (ENSRFEG00010009620) NPBWR1 (ENSRFEG00010009636) RB1CC1 (ENSRFEG00010009654) ST18 (ENSRFEG00010009724) ENSRFEG00010009897 #22 SNTG1 (ENSRFEG00010010115) ENSRFEG00010012270 SETSIP (ENSRFEG00010012378) PPDPFL (ENSRFEG00010012401) ENSRFEG00010012447 CLXN (ENSRFEG00010012494) ENSRFEG00010012650 ENSRFEG00010012735 MCM4 (ENSRFEG00010012774) PRKDC (ENSRFEG00010012932) CEBPD (ENSRFEG00010013042) SPIDR (ENSRFEG00010013063) ENSRFEG00010013158 ENSRFEG00010013177 LRRC69 (ENSRFEG00010013404) Greater horseshoe bat MODERN SPECIES 21 SLC35A1 (ENSRFEG00010001005) CFAP206 (ENSRFEG00010000973) C6orf163 (ENSRFEG00010000936) SMIM8 (ENSRFEG00010000921) GJB7 (ENSRFEG00010000902) ENSRFEG00010000874 CGA (ENSRFEG00010000864) HTR1E (ENSRFEG00010000854) ENSRFEG00010000844 ENSRFEG00010000834 SYNCRIP (ENSRFEG00010000799) SNX14 (ENSRFEG00010000634) NT5E (ENSRFEG00010000563) TBX18 (ENSRFEG00010000544) CEP162 (ENSRFEG00010000508) ENSRFEG00010000456 #22 ENSRFEG00010000425 MRAP2 (ENSRFEG00010000396) CYB5R4 (ENSRFEG00010000331) ENSRFEG00010000287 SNAP91 (ENSRFEG00010000204) PRSS35 (ENSRFEG00010018223) ME1 (ENSRFEG00010018174) RWDD2A (ENSRFEG00010018143) PGM3 (ENSRFEG00010017991) DOP1A (ENSRFEG00010017862) UBE3D (ENSRFEG00010017799) ENSRFEG00010017782 TPBG (ENSRFEG00010017768) IBTK (ENSRFEG00010017635) TENT5A (ENSRFEG00010017526) Microbat MODERN SPECIES 1050 SLA (ENSMLUG00000011145) PHF20L1 (ENSMLUG00000001525) ENSMLUG00000030437 TMEM71 (ENSMLUG00000001510) DNAAF11 (ENSMLUG00000008252) ENSMLUG00000015388 ENSMLUG00000022216 ADCY8 (ENSMLUG00000012194) ASAP1 (ENSMLUG00000009025) CYRIB (ENSMLUG00000011305) ENSMLUG00000008520 ENSMLUG00000026948 ENSMLUG00000029252 ENSMLUG00000027632 MYC (ENSMLUG00000026933) PCMTD1 (ENSMLUG00000002277) #22 SNTG1 (ENSMLUG00000011379) OTUD6B (ENSMLUG00000016954) ENSMLUG00000023522 SLC26A7 (ENSMLUG00000003742) RUNX1T1 (ENSMLUG00000004595) Megabat MODERN SPECIES 7104 PCMTD1 (ENSPVAG00000010682) #22 Equus ANCESTRAL SPECIES 14 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000156113 ENSGT00390000006658.a.b ENSGT00390000000521 ENSGT00940000153801.b ENSGT00950000183108.b.a.b ENSGT00390000007813 ENSGT00950000183131.b.a Horse MODERN SPECIES 30 MRPL15 (ENSECAG00000012110) LYPLA1 (ENSECAG00000016530) ENSECAG00000052889 TCEA1 (ENSECAG00000013436) ENSECAG00000050151 RGS20 (ENSECAG00000018510) ENSECAG00000044966 ATP6V1H (ENSECAG00000024159) OPRK1 (ENSECAG00000014442) ENSECAG00000047787 NPBWR1 (ENSECAG00000005077) RB1CC1 (ENSECAG00000017579) ALKAL1 (ENSECAG00000039026) ENSECAG00000058919 ENSECAG00000053325 PCMTD1 (ENSECAG00000022204) #22 ENSECAG00000053013 PXDNL (ENSECAG00000022817) ENSECAG00000019962 SNTG1 (ENSECAG00000000087) ENSECAG00000000401 ENSECAG00000056104 ENSECAG00000051290 PPDPFL (ENSECAG00000040755) SNAI2 (ENSECAG00000010120) CLXN (ENSECAG00000014162) UBE2V2 (ENSECAG00000027910) MCM4 (ENSECAG00000019276) PRKDC (ENSECAG00000020168) ENSECAG00000051008 ENSECAG00000056081 Donkey MODERN SPECIES 3 ENSEASG00005035435 ENSEASG00005027512 ENSEASG00005035589 ENSEASG00005029551 LYPLA1 (ENSEASG00005020322) TCEA1 (ENSEASG00005020313) RGS20 (ENSEASG00005020310) ATP6V1H (ENSEASG00005020298) ENSEASG00005026860 ENSEASG00005009805 OPRK1 (ENSEASG00005026342) NPBWR1 (ENSEASG00005020280) RB1CC1 (ENSEASG00005020230) ALKAL1 (ENSEASG00005020213) ST18 (ENSEASG00005020200) PCMTD1 (ENSEASG00005020195) #22 SNTG1 (ENSEASG00005020185) PPDPFL (ENSEASG00005024997) ENSEASG00005009186 CLXN (ENSEASG00005009190) UBE2V2 (ENSEASG00005024827) MCM4 (ENSEASG00005009194) ENSEASG00005035234 ENSEASG00005037902 PRKDC (ENSEASG00005009458) ENSEASG00005011359 ENSEASG00005011360 ENSEASG00005030668 ENSEASG00005027435 ENSEASG00005014064 OSGIN2 (ENSEASG00005028467) Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183032.A.a #22 Hedgehog MODERN SPECIES 8150 PCMTD1 (ENSEEUG00000001971) #22 Common shrew MODERN SPECIES 6416 ENSSARG00000008741 #22 Euarchontoglires ANCESTRAL SPECIES 19 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Primates ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Strepsirrhini ANCESTRAL SPECIES 15 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT00740000115534.a.b.f.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Lemuriformes ANCESTRAL SPECIES 24 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 Lemuriformes_a ANCESTRAL SPECIES 107 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00940000154185 ENSGT00390000009040 ENSGT00940000156694 ENSGT00940000154242.b ENSGT01070000253766.A.b Coquerels sifaka MODERN SPECIES 853 TCEA1 (ENSPCOG00000021601) RGS20 (ENSPCOG00000021873) ENSPCOG00000021440 ATP6V1H (ENSPCOG00000013848) OPRK1 (ENSPCOG00000015547) RB1CC1 (ENSPCOG00000013427) ALKAL1 (ENSPCOG00000023221) ST18 (ENSPCOG00000007929) PCMTD1 (ENSPCOG00000021881) #22 ENSPCOG00000008759 SNTG1 (ENSPCOG00000021495) PPDPFL (ENSPCOG00000009682) SNAI2 (ENSPCOG00000015656) CLXN (ENSPCOG00000013982) ENSPCOG00000025231 MCM4 (ENSPCOG00000014586) PRKDC (ENSPCOG00000014140) ENSPCOG00000024411 ENSPCOG00000024613 ENSPCOG00000025760 LYPLA1 (ENSPCOG00000021102) MRPL15 (ENSPCOG00000027252) SOX17 (ENSPCOG00000015523) ENSPCOG00000014780 Greater bamboo lemur MODERN SPECIES 304 TCEA1 (ENSPSMG00000014580) ENSPSMG00000014480 RGS20 (ENSPSMG00000014458) ATP6V1H (ENSPSMG00000014394) ENSPSMG00000014329 OPRK1 (ENSPSMG00000014319) NPBWR1 (ENSPSMG00000014303) ENSPSMG00000014298 RB1CC1 (ENSPSMG00000014088) ALKAL1 (ENSPSMG00000013919) ST18 (ENSPSMG00000013895) ENSPSMG00000013850 PCMTD1 (ENSPSMG00000013847) #22 Mouse lemur MODERN SPECIES 31 TGS1 (ENSMICG00000011199) LYN (ENSMICG00000031282) RPS20 (ENSMICG00000034860) PLAG1 (ENSMICG00000047968) CHCHD7 (ENSMICG00000007022) SDR16C5 (ENSMICG00000011717) PENK (ENSMICG00000041439) BPNT2 (ENSMICG00000028623) ENSMICG00000027477 FAM110B (ENSMICG00000041645) UBXN2B (ENSMICG00000028037) CYP7A1 (ENSMICG00000030668) RB1CC1 (ENSMICG00000000604) ALKAL1 (ENSMICG00000046052) ST18 (ENSMICG00000003705) PCMTD1 (ENSMICG00000003704) #22 ENSMICG00000045521 SNTG1 (ENSMICG00000001818) PPDPFL (ENSMICG00000045092) ENSMICG00000000335 CLXN (ENSMICG00000006465) ENSMICG00000009824 MCM4 (ENSMICG00000015638) PRKDC (ENSMICG00000015567) ENSMICG00000015552 ENSMICG00000042808 Bushbaby MODERN SPECIES 186 TMEM68 (ENSOGAG00000015631) XKR4 (ENSOGAG00000002186) ENSOGAG00000033038 ENSOGAG00000030025 SOX17 (ENSOGAG00000034932) ENSOGAG00000031239 MRPL15 (ENSOGAG00000003768) LYPLA1 (ENSOGAG00000003767) TCEA1 (ENSOGAG00000029746) ENSOGAG00000028530 ATP6V1H (ENSOGAG00000008887) OPRK1 (ENSOGAG00000016684) NPBWR1 (ENSOGAG00000029754) RB1CC1 (ENSOGAG00000016597) ST18 (ENSOGAG00000012050) PCMTD1 (ENSOGAG00000024368) #22 SNTG1 (ENSOGAG00000000619) Haplorrhini ANCESTRAL SPECIES 19 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Tarsier DUPLICATION Tarsier MODERN SPECIES 6769 ENSTSYG00000028401 #22 SIX6 (ENSTSYG00000025644) CUNH14orf39 (ENSTSYG00000003606) PPM1A (ENSTSYG00000003966) Tarsier MODERN SPECIES 6943 PCMTD1 (ENSTSYG00000032414) #22 Simiiformes ANCESTRAL SPECIES 20 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b Platyrrhini ANCESTRAL SPECIES 17 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.m ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00550000074939.m.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b Mas night monkey MODERN SPECIES 657 MRPL15 (ENSANAG00000031982) ENSANAG00000035611 ENSANAG00000002590 RGS20 (ENSANAG00000034281) ATP6V1H (ENSANAG00000012840) ENSANAG00000035847 OPRK1 (ENSANAG00000033012) NPBWR1 (ENSANAG00000004911) ENSANAG00000022735 RB1CC1 (ENSANAG00000029285) ALKAL1 (ENSANAG00000030352) ENSANAG00000031552 ST18 (ENSANAG00000030299) PCMTD1 (ENSANAG00000003477) #22 ENSANAG00000024030 PXDNL (ENSANAG00000025434) SNTG1 (ENSANAG00000024114) PPDPFL (ENSANAG00000022280) SNAI2 (ENSANAG00000021163) CLXN (ENSANAG00000032509) ENSANAG00000027457 ENSANAG00000024543 MCM4 (ENSANAG00000026411) PRKDC (ENSANAG00000028345) CEBPD (ENSANAG00000022717) ENSANAG00000029937 SPIDR (ENSANAG00000029053) ENSANAG00000034816 ENSANAG00000023377 Cebidae ANCESTRAL SPECIES 19 ENSGT00940000154242.b ENSGT00390000009040.l ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00390000009040.k.a ENSGT00940000154185.m ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00550000074939.m.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Marmoset MODERN SPECIES 7 ENSCJAG00000083559 ENSCJAG00000065730 TCEA1 (ENSCJAG00000014407) RGS20 (ENSCJAG00000014461) ATP6V1H (ENSCJAG00000014482) ENSCJAG00000070159 ENSCJAG00000080651 ENSCJAG00000078097 OPRK1 (ENSCJAG00000048611) ENSCJAG00000083591 ENSCJAG00000077834 RB1CC1 (ENSCJAG00000014530) ALKAL1 (ENSCJAG00000075812) ST18 (ENSCJAG00000014630) ENSCJAG00000083253 PCMTD1 (ENSCJAG00000080020) #22 PXDNL (ENSCJAG00000014675) ENSCJAG00000074431 ENSCJAG00000074905 ENSCJAG00000082175 ENSCJAG00000077462 SNTG1 (ENSCJAG00000015678) ENSCJAG00000081477 ENSCJAG00000052976 ENSCJAG00000078309 ENSCJAG00000081013 ENSCJAG00000081476 ENSCJAG00000072090 PPDPFL (ENSCJAG00000013496) SNAI2 (ENSCJAG00000013499) ENSCJAG00000055438 Cebidae_a ANCESTRAL SPECIES 54 ENSGT00940000154242.b ENSGT00390000009040.l ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00390000009040.k.a ENSGT00940000154185.m ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00550000074939.m.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Capuchin MODERN SPECIES 73 SOX17 (ENSCCAG00000034190) ENSCCAG00000032567 ENSCCAG00000018866 ENSCCAG00000000796 ENSCCAG00000036893 ENSCCAG00000023731 TCEA1 (ENSCCAG00000018619) RGS20 (ENSCCAG00000029095) ATP6V1H (ENSCCAG00000027346) ENSCCAG00000028173 OPRK1 (ENSCCAG00000033049) RB1CC1 (ENSCCAG00000022175) ALKAL1 (ENSCCAG00000036085) ENSCCAG00000034664 ST18 (ENSCCAG00000022063) PCMTD1 (ENSCCAG00000026243) #22 ENSCCAG00000031107 ENSCCAG00000035295 PXDNL (ENSCCAG00000025900) SNTG1 (ENSCCAG00000025501) ENSCCAG00000021374 PPDPFL (ENSCCAG00000027219) SNAI2 (ENSCCAG00000024100) EFCAB1 (ENSCCAG00000018583) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 178 TCEA1 (ENSSBOG00000033155) RGS20 (ENSSBOG00000021303) ATP6V1H (ENSSBOG00000030103) ENSSBOG00000025887 OPRK1 (ENSSBOG00000027337) NPBWR1 (ENSSBOG00000014546) RB1CC1 (ENSSBOG00000023965) ALKAL1 (ENSSBOG00000022434) ST18 (ENSSBOG00000023667) PCMTD1 (ENSSBOG00000014686) #22 PXDNL (ENSSBOG00000027067) SNTG1 (ENSSBOG00000020909) PPDPFL (ENSSBOG00000031825) SNAI2 (ENSSBOG00000035774) CLXN (ENSSBOG00000031612) ENSSBOG00000029529 MCM4 (ENSSBOG00000020974) PRKDC (ENSSBOG00000032387) SPIDR (ENSSBOG00000029698) Bolivian squirrel monkey MODERN SPECIES 112 ENSSBOG00000035175 SKAP2 (ENSSBOG00000022367) SNX10 (ENSSBOG00000026009) ENSSBOG00000029159 HNRNPA2B1 (ENSSBOG00000005245) NFE2L3 (ENSSBOG00000028975) ENSSBOG00000028454 ENSSBOG00000027366 NPVF (ENSSBOG00000020608) ENSSBOG00000027136 C7orf31 (ENSSBOG00000030318) OSBPL3 (ENSSBOG00000031298) GSDME (ENSSBOG00000023554) PALS2 (ENSSBOG00000020815) NPY (ENSSBOG00000023880) ENSSBOG00000006781 #22 STK31 (ENSSBOG00000033536) FAM221A (ENSSBOG00000021284) ENSSBOG00000032133 CCDC126 (ENSSBOG00000018628) TRA2A (ENSSBOG00000031562) ENSSBOG00000036184 IGF2BP3 (ENSSBOG00000019579) MALSU1 (ENSSBOG00000018985) GPNMB (ENSSBOG00000021795) NUP42 (ENSSBOG00000030576) KLHL7 (ENSSBOG00000030300) ENSSBOG00000028644 HYCC1 (ENSSBOG00000033769) ENSSBOG00000003308 IL6 (ENSSBOG00000023961) Catarrhini ANCESTRAL SPECIES 15 ENSGT00940000154242.b ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00940000153241.A.l.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00910000147457 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00940000154242.b ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00910000147457 Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00940000154242.b ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00910000147457 Vervet Monkey MODERN SPECIES 27 TMEM68 (ENSCSAG00000014625) ENSCSAG00000014632 ENSCSAG00000014645 RP1 (ENSCSAG00000014654) SOX17 (ENSCSAG00000014667) ENSCSAG00000018544 MRPL15 (ENSCSAG00000014671) TCEA1 (ENSCSAG00000014680) RGS20 (ENSCSAG00000014690) ATP6V1H (ENSCSAG00000014698) OPRK1 (ENSCSAG00000014703) NPBWR1 (ENSCSAG00000018542) RB1CC1 (ENSCSAG00000014715) ALKAL1 (ENSCSAG00000014724) ST18 (ENSCSAG00000014731) PCMTD1 (ENSCSAG00000014740) #22 ENSCSAG00000018539 PXDNL (ENSCSAG00000014768) SNTG1 (ENSCSAG00000014777) PPDPFL (ENSCSAG00000014783) SNAI2 (ENSCSAG00000014787) CLXN (ENSCSAG00000014792) ENSCSAG00000014799 MCM4 (ENSCSAG00000014816) PRKDC (ENSCSAG00000014860) SPIDR (ENSCSAG00000014882) HGSNAT (ENSCSAG00000014893) POMK (ENSCSAG00000014900) FNTA (ENSCSAG00000014932) HOOK3 (ENSCSAG00000014951) RNF170 (ENSCSAG00000014957) Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 ENSGT00390000004881.z ENSGT00940000159123 ENSGT00910000147783 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00390000001347.vb.a.b.b.b ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00910000147457 ENSGT00390000001491.a Macaca ANCESTRAL SPECIES 14 ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 ENSGT00390000004881.z ENSGT00940000159123 ENSGT00910000147783 ENSGT00390000003289 ENSGT00940000157341 ENSGT00390000001347.vb.a.b.b.b ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00910000147160 ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00390000001491.a ENSGT00390000004945 Pig-tailed macaque MODERN SPECIES 305 OPRK1 (ENSMNEG00000042852) ENSMNEG00000022043 ENSMNEG00000043554 NPBWR1 (ENSMNEG00000005589) RB1CC1 (ENSMNEG00000031596) ALKAL1 (ENSMNEG00000019421) ST18 (ENSMNEG00000028872) PCMTD1 (ENSMNEG00000035425) #22 Macaca_a ANCESTRAL SPECIES 16 ENSGT00940000154242.b ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT01040000240559.a.a.b ENSGT00390000009040 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00910000147783 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.b.b.b.a.b.b.a ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00910000147160 ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000156298.t ENSGT00390000001491.a ENSGT00940000158075 ENSGT00390000017123.b ENSGT00940000159383 Crab-eating macaque MODERN SPECIES 18 SOX17 (ENSMFAG00000056293) ENSMFAG00000062730 ENSMFAG00000064062 MRPL15 (ENSMFAG00000000491) ENSMFAG00000057104 TCEA1 (ENSMFAG00000041675) RGS20 (ENSMFAG00000031333) ENSMFAG00000064802 ATP6V1H (ENSMFAG00000032985) OPRK1 (ENSMFAG00000041857) ENSMFAG00000052865 RB1CC1 (ENSMFAG00000001661) ALKAL1 (ENSMFAG00000044072) ENSMFAG00000033133 ST18 (ENSMFAG00000000316) PCMTD1 (ENSMFAG00000005557) #22 PXDNL (ENSMFAG00000037176) SNTG1 (ENSMFAG00000034236) ENSMFAG00000059129 ENSMFAG00000049535 PPDPFL (ENSMFAG00000044803) ENSMFAG00000050827 SNAI2 (ENSMFAG00000065685) ENSMFAG00000048515 CLXN (ENSMFAG00000044408) UBE2V2 (ENSMFAG00000030364) MCM4 (ENSMFAG00000035531) ENSMFAG00000008892 ENSMFAG00000058985 ENSMFAG00000049002 SPIDR (ENSMFAG00000043945) Rhesus MODERN SPECIES 18 SOX17 (ENSMMUG00000063192) ENSMMUG00000051150 MRPL15 (ENSMMUG00000005539) LYPLA1 (ENSMMUG00000013157) TCEA1 (ENSMMUG00000016022) RGS20 (ENSMMUG00000015417) ATP6V1H (ENSMMUG00000004064) ENSMMUG00000063928 OPRK1 (ENSMMUG00000065247) ENSMMUG00000062566 NPBWR1 (ENSMMUG00000020909) ENSMMUG00000057267 RB1CC1 (ENSMMUG00000009990) ALKAL1 (ENSMMUG00000042459) ST18 (ENSMMUG00000008439) PCMTD1 (ENSMMUG00000003347) #22 PXDNL (ENSMMUG00000002781) ENSMMUG00000060991 SNTG1 (ENSMMUG00000002811) ENSMMUG00000047485 ENSMMUG00000057165 PPDPFL (ENSMMUG00000057040) SNAI2 (ENSMMUG00000016195) CLXN (ENSMMUG00000053238) ENSMMUG00000059736 UBE2V2 (ENSMMUG00000008223) MCM4 (ENSMMUG00000015360) PRKDC (ENSMMUG00000015347) ENSMMUG00000053228 CEBPD (ENSMMUG00000013151) ENSMMUG00000054991 Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 ENSGT00390000004881.z ENSGT00940000159123 ENSGT00910000147783 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00390000001347.vb.a.b.b.b ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00910000147457 ENSGT00390000001491.a Olive baboon MODERN SPECIES 18 ENSPANG00000015007 ENSPANG00000009673 TCEA1 (ENSPANG00000018453) RGS20 (ENSPANG00000017181) ATP6V1H (ENSPANG00000015126) ENSPANG00000032914 OPRK1 (ENSPANG00000009674) ENSPANG00000041605 RB1CC1 (ENSPANG00000020227) ENSPANG00000045412 ALKAL1 (ENSPANG00000015221) ENSPANG00000040573 ST18 (ENSPANG00000009233) ENSPANG00000042832 ENSPANG00000044009 PCMTD1 (ENSPANG00000013158) #22 ENSPANG00000046588 PXDNL (ENSPANG00000015687) SNTG1 (ENSPANG00000017058) PPDPFL (ENSPANG00000017056) SNAI2 (ENSPANG00000017540) CLXN (ENSPANG00000007207) ENSPANG00000044905 ENSPANG00000043805 C19orf18 (ENSPANG00000012028) ZNF606 (ENSPANG00000010429) UBE2V2 (ENSPANG00000009675) MCM4 (ENSPANG00000016300) PRKDC (ENSPANG00000025864) CEBPD (ENSPANG00000024953) SPIDR (ENSPANG00000010031) Cercopithecinae_d ANCESTRAL SPECIES 31 ENSGT00390000009040 ENSGT00940000154185.l.a.a.a ENSGT00940000155121 ENSGT00390000004881.z ENSGT00940000159123 ENSGT00910000147783 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00950000183029.B.c.b.b.b.u.a ENSGT00390000001347.vb.a.b.b.b ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 Sooty mangabey MODERN SPECIES 184 ENSCATG00000033814 SOX17 (ENSCATG00000032966) MRPL15 (ENSCATG00000029666) LYPLA1 (ENSCATG00000007446) TCEA1 (ENSCATG00000039602) ENSCATG00000029701 RGS20 (ENSCATG00000035536) ATP6V1H (ENSCATG00000036357) OPRK1 (ENSCATG00000037584) ENSCATG00000029226 ENSCATG00000028185 NPBWR1 (ENSCATG00000017400) RB1CC1 (ENSCATG00000031086) ALKAL1 (ENSCATG00000036184) ST18 (ENSCATG00000032688) PCMTD1 (ENSCATG00000034883) #22 PXDNL (ENSCATG00000012510) Drill MODERN SPECIES 1145 ENSMLEG00000033690 ENSMLEG00000043551 RB1CC1 (ENSMLEG00000031840) ALKAL1 (ENSMLEG00000036152) ST18 (ENSMLEG00000038764) PCMTD1 (ENSMLEG00000027519) #22 PXDNL (ENSMLEG00000040611) Rhinopithecus ANCESTRAL SPECIES 580 ENSGT00390000001347.vb.a.b.b.b ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a Golden snub-nosed monkey MODERN SPECIES 1448 ENSRROG00000045734 NPBWR1 (ENSRROG00000027603) RB1CC1 (ENSRROG00000037308) ALKAL1 (ENSRROG00000040005) ST18 (ENSRROG00000028859) PCMTD1 (ENSRROG00000033921) #22 PXDNL (ENSRROG00000010031) Black snub-nosed monkey MODERN SPECIES 1630 PCMTD1 (ENSRBIG00000018372) #22 Hominoidea ANCESTRAL SPECIES 14 ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a ENSGT00940000154185.l.a.b ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00940000153241.A.l.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00910000147457 Gibbon MODERN SPECIES 6 TMEM68 (ENSNLEG00000001094) ENSNLEG00000001093 ENSNLEG00000001087 ENSNLEG00000032778 SOX17 (ENSNLEG00000001085) MRPL15 (ENSNLEG00000029566) LYPLA1 (ENSNLEG00000001027) TCEA1 (ENSNLEG00000000981) RGS20 (ENSNLEG00000000956) ATP6V1H (ENSNLEG00000000870) OPRK1 (ENSNLEG00000033253) NPBWR1 (ENSNLEG00000018388) RB1CC1 (ENSNLEG00000000777) ALKAL1 (ENSNLEG00000000759) ST18 (ENSNLEG00000000678) PCMTD1 (ENSNLEG00000000661) #22 PXDNL (ENSNLEG00000000611) SNTG1 (ENSNLEG00000000578) ENSNLEG00000029558 PPDPFL (ENSNLEG00000028865) SNAI2 (ENSNLEG00000013421) CLXN (ENSNLEG00000013405) ENSNLEG00000019352 ENSNLEG00000036004 MCM4 (ENSNLEG00000013314) PRKDC (ENSNLEG00000013252) ENSNLEG00000035046 SPIDR (ENSNLEG00000013158) KCNB2 (ENSNLEG00000001288) ENSNLEG00000001291 TERF1 (ENSNLEG00000031169) Hominidae ANCESTRAL SPECIES 15 ENSGT00390000015600.c.a.e ENSGT00940000156694 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a ENSGT00940000154185.l.a.b ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00940000153241.A.l.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00910000147457 Orangutan MODERN SPECIES 21 XKR4 (ENSPPYG00000018595) RP1 (ENSPPYG00000018594) ENSPPYG00000035124 SOX17 (ENSPPYG00000018593) ENSPPYG00000018592 MRPL15 (ENSPPYG00000018591) LYPLA1 (ENSPPYG00000018589) RGS20 (ENSPPYG00000018588) ATP6V1H (ENSPPYG00000018587) OPRK1 (ENSPPYG00000018586) NPBWR1 (ENSPPYG00000018585) ENSPPYG00000030694 RB1CC1 (ENSPPYG00000018584) ALKAL1 (ENSPPYG00000018583) ST18 (ENSPPYG00000034718) PCMTD1 (ENSPPYG00000041146) #22 PXDNL (ENSPPYG00000018581) SNTG1 (ENSPPYG00000018580) PPDPFL (ENSPPYG00000018579) SNAI2 (ENSPPYG00000018578) CLXN (ENSPPYG00000018577) UBE2V2 (ENSPPYG00000018575) MCM4 (ENSPPYG00000018574) PRKDC (ENSPPYG00000018573) CEBPD (ENSPPYG00000018572) SPIDR (ENSPPYG00000018571) ENSPPYG00000038516 ENSPPYG00000041060 ENSPPYG00000018567 ENSPPYG00000037871 HGSNAT (ENSPPYG00000018565) Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00390000015600.c.a.f.c.b ENSGT00940000156694 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a ENSGT00940000154185.l.a.b.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000154351.k.b.a.b.b ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00940000153241.A.l.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00390000015738 Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00940000154242.b ENSGT00390000015600.c.a.f.c.b ENSGT00940000156694 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000154185.l.a.a ENSGT00940000154185.l.a.b.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00940000153241.A.l.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t ENSGT00940000154351.k.b.a.b.a ENSGT00390000015738.b Human MODERN SPECIES 20 TGS1 (ENSG00000137574) TMEM68 (ENSG00000167904) XKR4 (ENSG00000206579) RP1 (ENSG00000104237) SOX17 (ENSG00000164736) MRPL15 (ENSG00000137547) LYPLA1 (ENSG00000120992) TCEA1 (ENSG00000187735) RGS20 (ENSG00000147509) ATP6V1H (ENSG00000047249) OPRK1 (ENSG00000082556) NPBWR1 (ENSG00000288611) RB1CC1 (ENSG00000023287) ALKAL1 (ENSG00000196711) ST18 (ENSG00000147488) PCMTD1 (ENSG00000168300) #22 PXDNL (ENSG00000147485) SNTG1 (ENSG00000147481) PPDPFL (ENSG00000168333) SNAI2 (ENSG00000019549) CLXN (ENSG00000034239) UBE2V2 (ENSG00000169139) MCM4 (ENSG00000104738) PRKDC (ENSG00000253729) CEBPD (ENSG00000221869) SPIDR (ENSG00000164808) POTEA (ENSG00000188877) HGSNAT (ENSG00000165102) POMK (ENSG00000185900) FNTA (ENSG00000168522) HOOK3 (ENSG00000168172) Pan ANCESTRAL SPECIES 11 ENSGT00940000154242.b ENSGT00390000015600.c.a.f.c.b ENSGT00940000156694 ENSGT00440000038159.o.b ENSGT00390000009040 ENSGT00940000159076.v.b ENSGT00940000154185.l.a.b.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00390000009405.b.d ENSGT00950000182863.B.a ENSGT00940000153241.A.l.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00910000148642 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00520000055567.a.a.a.e.b ENSGT00940000156298.t Bonobo MODERN SPECIES 21 XKR4 (ENSPPAG00000036029) RP1 (ENSPPAG00000036902) ENSPPAG00000037225 SOX17 (ENSPPAG00000001324) MRPL15 (ENSPPAG00000034223) ENSPPAG00000031297 ENSPPAG00000038171 TCEA1 (ENSPPAG00000007248) RGS20 (ENSPPAG00000033679) ATP6V1H (ENSPPAG00000038229) OPRK1 (ENSPPAG00000028202) NPBWR1 (ENSPPAG00000033096) RB1CC1 (ENSPPAG00000040017) ALKAL1 (ENSPPAG00000040265) ST18 (ENSPPAG00000035808) PCMTD1 (ENSPPAG00000008533) #22 PXDNL (ENSPPAG00000034627) ENSPPAG00000041697 SNTG1 (ENSPPAG00000038256) ENSPPAG00000041874 PPDPFL (ENSPPAG00000033324) SNAI2 (ENSPPAG00000015662) CLXN (ENSPPAG00000034023) ENSPPAG00000032696 ENSPPAG00000043391 MCM4 (ENSPPAG00000031535) PRKDC (ENSPPAG00000029994) ENSPPAG00000030119 SPIDR (ENSPPAG00000031936) ENSPPAG00000037642 ENSPPAG00000042687 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 21 RP1 (ENSPTRG00000020256) SOX17 (ENSPTRG00000020254) ENSPTRG00000044364 MRPL15 (ENSPTRG00000020253) ENSPTRG00000052864 LYPLA1 (ENSPTRG00000043681) TCEA1 (ENSPTRG00000020251) RGS20 (ENSPTRG00000020250) ATP6V1H (ENSPTRG00000020249) ENSPTRG00000051579 OPRK1 (ENSPTRG00000038846) NPBWR1 (ENSPTRG00000031000) RB1CC1 (ENSPTRG00000020246) ALKAL1 (ENSPTRG00000024172) ST18 (ENSPTRG00000020245) PCMTD1 (ENSPTRG00000020242) #22 PXDNL (ENSPTRG00000020241) ENSPTRG00000043204 SNTG1 (ENSPTRG00000020240) ENSPTRG00000048958 ENSPTRG00000041948 PPDPFL (ENSPTRG00000020236) SNAI2 (ENSPTRG00000020235) CLXN (ENSPTRG00000020233) ENSPTRG00000043711 ENSPTRG00000043470 UBE2V2 (ENSPTRG00000048563) MCM4 (ENSPTRG00000020230) PRKDC (ENSPTRG00000020229) CEBPD (ENSPTRG00000042020) ENSPTRG00000047946 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 585 ENSPTRG00000048894 #22 ENSPTRG00000047172 ENSPTRG00000048634 ENSPTRG00000045270 ENSPTRG00000050818 ENSPTRG00000048125 ENSPTRG00000050896 ENSPTRG00000046098 Chimpanzee MODERN SPECIES 20 ENSPTRG00000049392 SKAP2 (ENSPTRG00000019007) ENSPTRG00000039177 ENSPTRG00000019006 SNX10 (ENSPTRG00000019004) CBX3 (ENSPTRG00000019003) HNRNPA2B1 (ENSPTRG00000019002) NFE2L3 (ENSPTRG00000019000) NPVF (ENSPTRG00000018998) C7H7orf31 (ENSPTRG00000018997) CYCS (ENSPTRG00000018996) OSBPL3 (ENSPTRG00000018995) GSDME (ENSPTRG00000018994) PALS2 (ENSPTRG00000018993) NPY (ENSPTRG00000018992) ENSPTRG00000050945 #22 STK31 (ENSPTRG00000018991) FAM221A (ENSPTRG00000018990) CCDC126 (ENSPTRG00000018989) ENSPTRG00000043234 ENSPTRG00000046014 ENSPTRG00000046677 TRA2A (ENSPTRG00000018988) ENSPTRG00000052447 ENSPTRG00000042858 ENSPTRG00000051093 IGF2BP3 (ENSPTRG00000018986) MALSU1 (ENSPTRG00000018985) GPNMB (ENSPTRG00000018984) ENSPTRG00000023737 NUP42 (ENSPTRG00000018983) Gorilla DUPLICATION Gorilla MODERN SPECIES 21 RP1 (ENSGGOG00000012280) ENSGGOG00000024314 ENSGGOG00000023175 ENSGGOG00000039556 MRPL15 (ENSGGOG00000010403) ENSGGOG00000028339 TCEA1 (ENSGGOG00000023652) RGS20 (ENSGGOG00000001386) ATP6V1H (ENSGGOG00000000515) ENSGGOG00000043511 OPRK1 (ENSGGOG00000000682) NPBWR1 (ENSGGOG00000015243) RB1CC1 (ENSGGOG00000028523) ALKAL1 (ENSGGOG00000002382) ST18 (ENSGGOG00000001223) PCMTD1 (ENSGGOG00000025636) #22 PXDNL (ENSGGOG00000014572) SNTG1 (ENSGGOG00000004595) ENSGGOG00000037165 PPDPFL (ENSGGOG00000005946) SNAI2 (ENSGGOG00000000959) CLXN (ENSGGOG00000015381) UBE2V2 (ENSGGOG00000037904) MCM4 (ENSGGOG00000006080) PRKDC (ENSGGOG00000006036) CEBPD (ENSGGOG00000008077) SPIDR (ENSGGOG00000007599) ENSGGOG00000042073 ENSGGOG00000039559 ENSGGOG00000005483 ENSGGOG00000028149 Gorilla MODERN SPECIES LIX1L (ENSGGOG00000005408) RBM8A (ENSGGOG00000037248) ENSGGOG00000005412 PEX11B (ENSGGOG00000015402) ITGA10 (ENSGGOG00000015407) ANKRD35 (ENSGGOG00000015424) PIAS3 (ENSGGOG00000007266) NUDT17 (ENSGGOG00000007275) POLR3C (ENSGGOG00000007279) RNF115 (ENSGGOG00000007291) ENSGGOG00000024675 ENSGGOG00000037578 ENSGGOG00000038111 ENSGGOG00000040113 ENSGGOG00000043592 ENSGGOG00000024428 #22 ENSGGOG00000002474 ENSGGOG00000037862 ENSGGOG00000043993 ENSGGOG00000043684 ENSGGOG00000042435 ENSGGOG00000036274 ENSGGOG00000024907 ENSGGOG00000024891 PRKAB2 (ENSGGOG00000021957) ENSGGOG00000004670 FMO5 (ENSGGOG00000009281) ENSGGOG00000039475 CHD1L (ENSGGOG00000001067) ENSGGOG00000025887 BCL9 (ENSGGOG00000009304) Euarchontoglires_A ANCESTRAL SPECIES 19 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Tree shrew MODERN SPECIES 3560 PCMTD1 (ENSTBEG00000013172) #22 Glires ANCESTRAL SPECIES 20 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Lagomorpha ANCESTRAL SPECIES 112 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694.hb ENSGT00940000156694.gb ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00390000009113.a.b ENSGT00940000154681.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000163032 ENSGT00390000014654 Pika MODERN SPECIES 4351 PCMTD1 (ENSOPRG00000010661) #22 Rabbit MODERN SPECIES 14 RP1 (ENSOCUG00000015022) ENSOCUG00000037040 ENSOCUG00000012651 ENSOCUG00000008012 MRPL15 (ENSOCUG00000001949) LYPLA1 (ENSOCUG00000006751) ENSOCUG00000001051 ATP6V1H (ENSOCUG00000016298) OPRK1 (ENSOCUG00000003120) NPBWR1 (ENSOCUG00000028231) ENSOCUG00000033530 RB1CC1 (ENSOCUG00000016393) ALKAL1 (ENSOCUG00000029695) ST18 (ENSOCUG00000013284) ENSOCUG00000026814 PCMTD1 (ENSOCUG00000016958) #22 PXDNL (ENSOCUG00000005558) ENSOCUG00000016910 ENSOCUG00000022155 SNTG1 (ENSOCUG00000016550) ENSOCUG00000023403 ENSOCUG00000038370 PPDPFL (ENSOCUG00000029166) ENSOCUG00000012254 CLXN (ENSOCUG00000004518) ENSOCUG00000006933 MCM4 (ENSOCUG00000001710) ENSOCUG00000025135 SPIDR (ENSOCUG00000001687) ZNF354A (ENSOCUG00000029378) CLK4 (ENSOCUG00000003228) Rodentia ANCESTRAL SPECIES 19 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Rodentia_A ANCESTRAL SPECIES 18 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Sciuridae ANCESTRAL SPECIES 17 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 Eurasian red squirrel MODERN SPECIES ENSSVLG00005009646 TCEA1 (ENSSVLG00005009501) RGS20 (ENSSVLG00005009394) ENSSVLG00005009360 ATP6V1H (ENSSVLG00005009299) ENSSVLG00005009270 OPRK1 (ENSSVLG00005009227) ENSSVLG00005009204 ENSSVLG00005009187 NPBWR1 (ENSSVLG00005009175) ENSSVLG00005009157 RB1CC1 (ENSSVLG00005009081) ALKAL1 (ENSSVLG00005009002) ENSSVLG00005008883 ENSSVLG00005008837 PCMTD1 (ENSSVLG00005008801) #22 PXDNL (ENSSVLG00005008684) SNTG1 (ENSSVLG00005007613) PPDPFL (ENSSVLG00005007203) ENSSVLG00005007187 SNAI2 (ENSSVLG00005007170) ENSSVLG00005007144 CLXN (ENSSVLG00005007101) ENSSVLG00005007072 ENSSVLG00005007058 ENSSVLG00005007040 UBE2V2 (ENSSVLG00005006994) MCM4 (ENSSVLG00005006762) CEBPD (ENSSVLG00005006258) SUPT3H (ENSSVLG00005006225) ENSSVLG00005006182 Marmotini ANCESTRAL SPECIES 10 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00940000168767 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 16 ENSMMMG00000001041 SOX17 (ENSMMMG00000001029) ENSMMMG00000001024 MRPL15 (ENSMMMG00000001003) LYPLA1 (ENSMMMG00000000994) TCEA1 (ENSMMMG00000000970) ATP6V1H (ENSMMMG00000000819) OPRK1 (ENSMMMG00000000792) ENSMMMG00000000769 ENSMMMG00000000761 NPBWR1 (ENSMMMG00000000755) RB1CC1 (ENSMMMG00000000733) ALKAL1 (ENSMMMG00000000712) ST18 (ENSMMMG00000000496) ENSMMMG00000000469 PCMTD1 (ENSMMMG00000000404) #22 PXDNL (ENSMMMG00000000367) SNTG1 (ENSMMMG00000000104) ENSMMMG00000000024 ENSMMMG00000000012 SNAI2 (ENSMMMG00000022198) CLXN (ENSMMMG00000022191) ENSMMMG00000022170 ENSMMMG00000022167 ENSMMMG00000022157 ENSMMMG00000022151 ENSMMMG00000022149 UBE2V2 (ENSMMMG00000022141) MCM4 (ENSMMMG00000022114) PRKDC (ENSMMMG00000022087) CEBPD (ENSMMMG00000022067) Alpin marmot MODERN SPECIES 52 TAS2R13 (ENSMMMG00000015711) ENSMMMG00000015717 ENSMMMG00000015720 ENSMMMG00000015730 ENSMMMG00000015737 ENSMMMG00000015740 ENSMMMG00000015748 ENSMMMG00000015762 ENSMMMG00000015791 ENSMMMG00000015798 SMIM10L1 (ENSMMMG00000015807) TAS2R42 (ENSMMMG00000015810) ENSMMMG00000015825 #22 ETV6 (ENSMMMG00000015841) ENSMMMG00000015848 ENSMMMG00000015852 LRP6 (ENSMMMG00000015858) MANSC1 (ENSMMMG00000015882) BORCS5 (ENSMMMG00000015886) DUSP16 (ENSMMMG00000015907) CREBL2 (ENSMMMG00000015915) GPR19 (ENSMMMG00000015920) ENSMMMG00000015925 ENSMMMG00000015938 DDX47 (ENSMMMG00000015940) GPRC5A (ENSMMMG00000015958) GPRC5D (ENSMMMG00000015965) HEBP1 (ENSMMMG00000015970) Marmotini_b ANCESTRAL SPECIES 52 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00940000168767 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Arctic ground squirrel MODERN SPECIES 137 SOX17 (ENSUPAG00010002964) MRPL15 (ENSUPAG00010002973) LYPLA1 (ENSUPAG00010002986) TCEA1 (ENSUPAG00010003008) ENSUPAG00010003023 RGS20 (ENSUPAG00010003027) ATP6V1H (ENSUPAG00010003037) OPRK1 (ENSUPAG00010003107) ENSUPAG00010003124 NPBWR1 (ENSUPAG00010003128) ENSUPAG00010003143 RB1CC1 (ENSUPAG00010003148) ALKAL1 (ENSUPAG00010003181) ST18 (ENSUPAG00010003189) ENSUPAG00010003296 PCMTD1 (ENSUPAG00010003305) #22 PXDNL (ENSUPAG00010003311) Squirrel MODERN SPECIES 190 NPBWR1 (ENSSTOG00000031799) ENSSTOG00000033788 RB1CC1 (ENSSTOG00000003037) ALKAL1 (ENSSTOG00000003032) ST18 (ENSSTOG00000016500) ENSSTOG00000027757 PCMTD1 (ENSSTOG00000005412) #22 SNTG1 (ENSSTOG00000006780) SNAI2 (ENSSTOG00000028743) CLXN (ENSSTOG00000005832) ENSSTOG00000033326 UBE2V2 (ENSSTOG00000021769) MCM4 (ENSSTOG00000009905) PRKDC (ENSSTOG00000009784) SPIDR (ENSSTOG00000010890) Hystricomorpha ANCESTRAL SPECIES 12 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.cb ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.v ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000155908.b ENSGT00940000161075 ENSGT00940000157478 ENSGT00940000157170 ENSGT00390000010251 ENSGT01050000244857.A.a.a ENSGT00940000158219 Naked mole-rat female MODERN SPECIES 1 TCEA1 (ENSHGLG00000036590) ENSHGLG00000043019 ENSHGLG00000045461 ENSHGLG00000050091 ATP6V1H (ENSHGLG00000018810) Oprk1 (ENSHGLG00000038296) ENSHGLG00000046007 ENSHGLG00000003564 ENSHGLG00000015610 NPBWR1 (ENSHGLG00000021373) ENSHGLG00000013146 RB1CC1 (ENSHGLG00000018518) ALKAL1 (ENSHGLG00000038780) ENSHGLG00000016233 ENSHGLG00000014452 PCMTD1 (ENSHGLG00000045944) #22 ENSHGLG00000045690 ENSHGLG00000048304 ENSHGLG00000044626 SNTG1 (ENSHGLG00000005037) ENSHGLG00000050331 PPDPFL (ENSHGLG00000032230) ENSHGLG00000009439 CLXN (ENSHGLG00000010454) ENSHGLG00000034668 ENSHGLG00000034089 UBE2V2 (ENSHGLG00000038834) MCM4 (ENSHGLG00000018964) PRKDC (ENSHGLG00000013287) ENSHGLG00000020699 ENSHGLG00000041479 Hystricomorpha_a ANCESTRAL SPECIES 9 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185.cb ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.v ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000155908.b ENSGT00940000161075 ENSGT00940000157478 ENSGT00940000157170 ENSGT00390000010251 ENSGT01050000244857.A.a.a ENSGT00940000158219 ENSGT00940000155474 Guinea pig MODERN SPECIES 64 ENSCPOG00000039324 SOX17 (ENSCPOG00000000892) MRPL15 (ENSCPOG00000035946) LYPLA1 (ENSCPOG00000022715) TCEA1 (ENSCPOG00000005886) ENSCPOG00000038533 ENSCPOG00000022816 ATP6V1H (ENSCPOG00000012174) ENSCPOG00000023180 OPRK1 (ENSCPOG00000006607) NPBWR1 (ENSCPOG00000019602) RB1CC1 (ENSCPOG00000020341) ENSCPOG00000034718 ENSCPOG00000032897 ST18 (ENSCPOG00000005486) PCMTD1 (ENSCPOG00000038704) #22 SNTG1 (ENSCPOG00000010462) ENSCPOG00000033449 CLXN (ENSCPOG00000003325) UBE2V2 (ENSCPOG00000039321) MCM4 (ENSCPOG00000003682) PRKDC (ENSCPOG00000013944) ENSCPOG00000036691 Hystricomorpha_b ANCESTRAL SPECIES 27 ENSGT00940000158011 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00390000009040 ENSGT00940000154185.bb.a ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.v ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00390000014654 ENSGT00940000155908.b ENSGT00940000161075 ENSGT00940000157478 ENSGT00940000157170 ENSGT00390000010251 ENSGT01050000244857.A.a.a ENSGT00940000158219 ENSGT00940000155474 Long-tailed chinchilla MODERN SPECIES 161 LYN (ENSCLAG00000010085) TGS1 (ENSCLAG00000009468) TMEM68 (ENSCLAG00000009473) XKR4 (ENSCLAG00000010575) ENSCLAG00000011553 MRPL15 (ENSCLAG00000010064) ENSCLAG00000014943 TCEA1 (ENSCLAG00000013516) ENSCLAG00000016009 ATP6V1H (ENSCLAG00000009337) OPRK1 (ENSCLAG00000009850) ENSCLAG00000009340 RB1CC1 (ENSCLAG00000009807) ENSCLAG00000014346 ST18 (ENSCLAG00000011202) PCMTD1 (ENSCLAG00000009964) #22 ENSCLAG00000014877 SNTG1 (ENSCLAG00000013065) SNAI2 (ENSCLAG00000011797) CLXN (ENSCLAG00000015811) UBE2V2 (ENSCLAG00000010839) MCM4 (ENSCLAG00000014363) PRKDC (ENSCLAG00000009459) SPIDR (ENSCLAG00000009550) ENSCLAG00000009679 ENSCLAG00000017747 IQSEC3 (ENSCLAG00000011610) SLC6A12 (ENSCLAG00000016481) SLC6A13 (ENSCLAG00000012266) KDM5A (ENSCLAG00000012583) CCDC77 (ENSCLAG00000013123) Degu MODERN SPECIES 95 XKR4 (ENSODEG00000003156) ENSODEG00000003202 ENSODEG00000018873 ENSODEG00000002691 ENSODEG00000002737 ENSODEG00000002753 ENSODEG00000002823 ATP6V1H (ENSODEG00000002840) ENSODEG00000002936 OPRK1 (ENSODEG00000002988) NPBWR1 (ENSODEG00000019191) ENSODEG00000003047 ENSODEG00000003192 ENSODEG00000003208 ST18 (ENSODEG00000003288) PCMTD1 (ENSODEG00000003571) #22 SNTG1 (ENSODEG00000003621) ENSODEG00000003654 CLXN (ENSODEG00000003725) ENSODEG00000003745 ENSODEG00000018960 ENSODEG00000019042 ENSODEG00000004479 MCM4 (ENSODEG00000004626) PRKDC (ENSODEG00000004916) CEBPD (ENSODEG00000002997) ENSODEG00000003011 ENSODEG00000003049 ENSODEG00000003100 ENSODEG00000018938 PEX26 (ENSODEG00000003167) Rodentia_B ANCESTRAL SPECIES 17 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.f.a.b.d ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 Kangaroo rat MODERN SPECIES 328 ENSDORG00000012483 Xkr4 (ENSDORG00000005763) Rp1 (ENSDORG00000009139) Sox17 (ENSDORG00000027735) Mrpl15 (ENSDORG00000012200) Lypla1 (ENSDORG00000001479) Tcea1 (ENSDORG00000015058) ENSDORG00000006333 Atp6v1h (ENSDORG00000007689) Oprk1 (ENSDORG00000009506) Npbwr1 (ENSDORG00000013949) ENSDORG00000005679 ENSDORG00000029422 Alkal1 (ENSDORG00000001904) St18 (ENSDORG00000002635) Pcmtd1 (ENSDORG00000025253) #22 Sntg1 (ENSDORG00000010206) Snai2 (ENSDORG00000029620) Efcab1 (ENSDORG00000000823) Ube2v2 (ENSDORG00000029077) ENSDORG00000004422 Prkdc (ENSDORG00000004417) ENSDORG00000025707 Itgb1 (ENSDORG00000007780) Nrp1 (ENSDORG00000002431) Pard3 (ENSDORG00000000366) ENSDORG00000024661 ENSDORG00000000755 Crem (ENSDORG00000001162) Ccny (ENSDORG00000000413) ENSDORG00000003285 Myomorpha ANCESTRAL SPECIES 18 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00800000125285 Lesser Egyptian jerboa MODERN SPECIES 51 Xkr4 (ENSJJAG00000013870) ENSJJAG00000015642 ENSJJAG00000012132 Sox17 (ENSJJAG00000021381) Mrpl15 (ENSJJAG00000016599) ENSJJAG00000019339 Tcea1 (ENSJJAG00000020282) Rgs20 (ENSJJAG00000004359) Atp6v1h (ENSJJAG00000018257) Oprk1 (ENSJJAG00000019887) ENSJJAG00000011904 Npbwr1 (ENSJJAG00000012018) ENSJJAG00000019800 Alkal1 (ENSJJAG00000000797) St18 (ENSJJAG00000020074) ENSJJAG00000008876 #22 ENSJJAG00000011205 Cxcl13 (ENSJJAG00000015547) Cnot6l (ENSJJAG00000020583) ENSJJAG00000012403 Mrpl1 (ENSJJAG00000012571) ENSJJAG00000017212 Fras1 (ENSJJAG00000013532) Anxa3 (ENSJJAG00000013184) ENSJJAG00000010058 ENSJJAG00000019336 Gk2 (ENSJJAG00000022767) Antxr2 (ENSJJAG00000017756) Prdm8 (ENSJJAG00000014847) Fgf5 (ENSJJAG00000014176) Cfap299 (ENSJJAG00000020179) Muroidea ANCESTRAL SPECIES 14 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00800000125285 Upper Galilee mountains blind mole rat MODERN SPECIES 1121 Pclo (ENSNGAG00000000547) Sema3e (ENSNGAG00000000058) Sema3a (ENSNGAG00000013108) ENSNGAG00000000433 ENSNGAG00000007720 Alkal1 (ENSNGAG00000000002) St18 (ENSNGAG00000005949) Pcmtd1 (ENSNGAG00000007582) #22 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00800000125285 Cricetidae ANCESTRAL SPECIES 2 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a Cricetinae ANCESTRAL SPECIES 31 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 Chinese hamster chok1gshd MODERN SPECIES 136 ENSCGRG00001014282 ENSCGRG00001013815 ENSCGRG00001010786 Sox17 (ENSCGRG00001009950) ENSCGRG00001020498 ENSCGRG00001016962 ENSCGRG00001000991 Rgs20 (ENSCGRG00001023847) Atp6v1h (ENSCGRG00001018456) Oprk1 (ENSCGRG00001014321) ENSCGRG00001013124 Npbwr1 (ENSCGRG00001001773) Rb1cc1 (ENSCGRG00001010377) Alkal1 (ENSCGRG00001008308) St18 (ENSCGRG00001012689) Pcmtd1 (ENSCGRG00001010283) #22 Cricetidae_B ANCESTRAL SPECIES 50 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a Prairie vole MODERN SPECIES 355 ENSMOCG00000003814 ENSMOCG00000019449 ENSMOCG00000021042 Mrpl15 (ENSMOCG00000015777) ENSMOCG00000018466 Lypla1 (ENSMOCG00000016895) Tcea1 (ENSMOCG00000018663) Rgs20 (ENSMOCG00000021946) Atp6v1h (ENSMOCG00000013542) Oprk1 (ENSMOCG00000021359) Npbwr1 (ENSMOCG00000004089) ENSMOCG00000013160 ENSMOCG00000018517 Alkal1 (ENSMOCG00000005863) St18 (ENSMOCG00000021621) Pcmtd1 (ENSMOCG00000015657) #22 Sntg1 (ENSMOCG00000017645) ENSMOCG00000004384 Hsdl2 (ENSMOCG00000011024) Ptbp3 (ENSMOCG00000019609) Susd1 (ENSMOCG00000000787) Ugcg (ENSMOCG00000003778) Shoc1 (ENSMOCG00000017996) ENSMOCG00000000713 Dnajc25 (ENSMOCG00000020114) Ptgr1 (ENSMOCG00000015613) Zkscan16 (ENSMOCG00000019107) Ecpas (ENSMOCG00000020767) Or2k2 (ENSMOCG00000006465) ENSMOCG00000001270 Lpar1 (ENSMOCG00000021694) Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 11 Tcea1 (ENSPEMG00000023948) Rgs20 (ENSPEMG00000009893) Atp6v1h (ENSPEMG00000002059) ENSPEMG00000024522 Oprk1 (ENSPEMG00000030744) ENSPEMG00000004044 Npbwr1 (ENSPEMG00000001350) ENSPEMG00000027986 Rb1cc1 (ENSPEMG00000022179) Alkal1 (ENSPEMG00000022797) ENSPEMG00000024780 ENSPEMG00000025981 St18 (ENSPEMG00000021799) ENSPEMG00000029331 ENSPEMG00000009884 Pcmtd1 (ENSPEMG00000027595) #22 Sntg1 (ENSPEMG00000008856) Nkain3 (ENSPEMG00000000608) ENSPEMG00000006880 ENSPEMG00000029781 Prdm13 (ENSPEMG00000000098) Ccnc (ENSPEMG00000015952) Tstd3 (ENSPEMG00000011487) Usp45 (ENSPEMG00000006676) ENSPEMG00000030192 Pnisr (ENSPEMG00000003524) Coq3 (ENSPEMG00000002775) Faxc (ENSPEMG00000000141) Fbxl4 (ENSPEMG00000015634) Pou3f2 (ENSPEMG00000002130) Mms22l (ENSPEMG00000008908) Northern American deer mouse MODERN SPECIES 5 Gpr33 (ENSPEMG00000015422) Dtd2 (ENSPEMG00000020439) Heatr5a (ENSPEMG00000014455) Hectd1 (ENSPEMG00000011192) Ap4s1 (ENSPEMG00000028602) Strn3 (ENSPEMG00000018694) Coch (ENSPEMG00000014561) Scfd1 (ENSPEMG00000013333) G2e3 (ENSPEMG00000014724) Prkd1 (ENSPEMG00000011695) ENSPEMG00000029110 ENSPEMG00000011512 Foxg1 (ENSPEMG00000014163) Nova1 (ENSPEMG00000006503) Stxbp6 (ENSPEMG00000006826) ENSPEMG00000008750 #22 Nrcam (ENSPEMG00000000666) Pnpla8 (ENSPEMG00000013308) Dnajb9 (ENSPEMG00000025224) ENSPEMG00000030494 ENSPEMG00000000820 Immp2l (ENSPEMG00000017740) Lrrn3 (ENSPEMG00000013198) Dock4 (ENSPEMG00000011461) Zfp277 (ENSPEMG00000016665) ENSPEMG00000025333 Ifrd1 (ENSPEMG00000000131) Lsmem1 (ENSPEMG00000026633) Scin (ENSPEMG00000000931) Arl4a (ENSPEMG00000029611) ENSPEMG00000022349 Murinae ANCESTRAL SPECIES 2 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 ENSGT00940000158260 ENSGT00550000074850 ENSGT00390000015084.d ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 Rat MODERN SPECIES 15 Rp1 (ENSRNOG00000008807) ENSRNOG00000065942 Sumo4 (ENSRNOG00000069967) Sox17 (ENSRNOG00000027357) Mrpl15 (ENSRNOG00000008566) Lypla1 (ENSRNOG00000008320) Tcea1 (ENSRNOG00000022323) Rgs20 (ENSRNOG00000008100) Atp6v1h (ENSRNOG00000030862) Oprk1 (ENSRNOG00000007647) Npbwr1 (ENSRNOG00000007640) Rb1cc1 (ENSRNOG00000006833) Alkal1 (ENSRNOG00000048703) St18 (ENSRNOG00000006200) AABR07046956.1 (ENSRNOG00000040219) Pcmtd1 (ENSRNOG00000005730) #22 ENSRNOG00000064844 ENSRNOG00000063427 ENSRNOG00000063845 Sntg1 (ENSRNOG00000007294) Rrs1 (ENSRNOG00000007240) Adhfe1 (ENSRNOG00000007069) Vxn (ENSRNOG00000021663) Mybl1 (ENSRNOG00000021669) Vcpip1 (ENSRNOG00000006980) Sgk3 (ENSRNOG00000049052) Mcmdc2 (ENSRNOG00000021702) Ppp1r42 (ENSRNOG00000006804) Tcf24 (ENSRNOG00000052668) Cops5 (ENSRNOG00000006499) Cspp1 (ENSRNOG00000021718) Mus ANCESTRAL SPECIES 3 ENSGT00390000018056 ENSGT01100000265193 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 ENSGT00940000158260 ENSGT00550000074850 ENSGT00390000015084.d ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 Shrew mouse MODERN SPECIES 14 MGP_PahariEiJ_G0023900 Xkr4 (MGP_PahariEiJ_G0023899) Rp1 (MGP_PahariEiJ_G0023898) Sox17 (MGP_PahariEiJ_G0023897) Mrpl15 (MGP_PahariEiJ_G0023896) Lypla1 (MGP_PahariEiJ_G0023895) MGP_PahariEiJ_G0023894 Tcea1 (MGP_PahariEiJ_G0023893) Rgs20 (MGP_PahariEiJ_G0023892) Atp6v1h (MGP_PahariEiJ_G0023891) Oprk1 (MGP_PahariEiJ_G0023890) Npbwr1 (MGP_PahariEiJ_G0023889) Rb1cc1 (MGP_PahariEiJ_G0023888) MGP_PahariEiJ_G0023887 St18 (MGP_PahariEiJ_G0023886) Pcmtd1 (MGP_PahariEiJ_G0023885) #22 Sntg1 (MGP_PahariEiJ_G0023884) Rrs1 (MGP_PahariEiJ_G0023883) Adhfe1 (MGP_PahariEiJ_G0023882) Vxn (MGP_PahariEiJ_G0023881) Mybl1 (MGP_PahariEiJ_G0023880) Vcpip1 (MGP_PahariEiJ_G0023879) Sgk3 (MGP_PahariEiJ_G0023878) Mcmdc2 (MGP_PahariEiJ_G0023877) Tcf24 (MGP_PahariEiJ_G0023876) Ppp1r42 (MGP_PahariEiJ_G0023875) Cops5 (MGP_PahariEiJ_G0023874) Cspp1 (MGP_PahariEiJ_G0023873) Arfgef1 (MGP_PahariEiJ_G0023872) Cpa6 (MGP_PahariEiJ_G0023871) Prex2 (MGP_PahariEiJ_G0023870) Mus_A ANCESTRAL SPECIES 5 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 ENSGT00940000158260 ENSGT00550000074850 ENSGT00390000015084.d ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 Ryukyu mouse MODERN SPECIES Xkr4 (MGP_CAROLIEiJ_G0013919) Rp1 (MGP_CAROLIEiJ_G0013920) Sox17 (MGP_CAROLIEiJ_G0013921) Mrpl15 (MGP_CAROLIEiJ_G0013922) Lypla1 (MGP_CAROLIEiJ_G0013923) MGP_CAROLIEiJ_G0013924 Tcea1 (MGP_CAROLIEiJ_G0013925) Rgs20 (MGP_CAROLIEiJ_G0013926) Atp6v1h (MGP_CAROLIEiJ_G0013927) Oprk1 (MGP_CAROLIEiJ_G0013928) Npbwr1 (MGP_CAROLIEiJ_G0013929) Rb1cc1 (MGP_CAROLIEiJ_G0013930) Alkal1 (MGP_CAROLIEiJ_G0013931) St18 (MGP_CAROLIEiJ_G0013932) MGP_CAROLIEiJ_G0013933 #22 Sntg1 (MGP_CAROLIEiJ_G0013934) MGP_CAROLIEiJ_G0013935 Rrs1 (MGP_CAROLIEiJ_G0013936) Adhfe1 (MGP_CAROLIEiJ_G0013937) Vxn (MGP_CAROLIEiJ_G0013938) Mybl1 (MGP_CAROLIEiJ_G0013939) Vcpip1 (MGP_CAROLIEiJ_G0013940) Sgk3 (MGP_CAROLIEiJ_G0013941) Mcmdc2 (MGP_CAROLIEiJ_G0013942) Tcf24 (MGP_CAROLIEiJ_G0013943) Ppp1r42 (MGP_CAROLIEiJ_G0013944) Cops5 (MGP_CAROLIEiJ_G0013945) Cspp1 (MGP_CAROLIEiJ_G0013946) Arfgef1 (MGP_CAROLIEiJ_G0013947) Cpa6 (MGP_CAROLIEiJ_G0013948) Mus_B ANCESTRAL SPECIES 21 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.`b ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 ENSGT00940000158260 ENSGT00550000074850 ENSGT00390000015084.d ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 Mouse MODERN SPECIES Xkr4 (ENSMUSG00000051951) Rp1 (ENSMUSG00000025900) Sox17 (ENSMUSG00000025902) Mrpl15 (ENSMUSG00000033845) Lypla1 (ENSMUSG00000025903) Tcea1 (ENSMUSG00000033813) Rgs20 (ENSMUSG00000002459) Atp6v1h (ENSMUSG00000033793) Oprk1 (ENSMUSG00000025905) Npbwr1 (ENSMUSG00000033774) Rb1cc1 (ENSMUSG00000025907) Alkal1 (ENSMUSG00000087247) St18 (ENSMUSG00000033740) Pcmtd1 (ENSMUSG00000051285) #22 Sntg1 (ENSMUSG00000025909) Rrs1 (ENSMUSG00000061024) Adhfe1 (ENSMUSG00000025911) Vxn (ENSMUSG00000067879) Mybl1 (ENSMUSG00000025912) Vcpip1 (ENSMUSG00000045210) Sgk3 (ENSMUSG00000025915) Mcmdc2 (ENSMUSG00000046101) Tcf24 (ENSMUSG00000099032) Ppp1r42 (ENSMUSG00000025916) Cops5 (ENSMUSG00000025917) Cspp1 (ENSMUSG00000056763) Arfgef1 (ENSMUSG00000067851) Cpa6 (ENSMUSG00000042501) Prex2 (ENSMUSG00000048960) Mus_C ANCESTRAL SPECIES 33 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000161936 ENSGT00390000015871.`b ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000005213 ENSGT00390000003849 ENSGT00390000010499 ENSGT00940000157709 ENSGT00390000002854 ENSGT00940000153776.a.a ENSGT01090000260080.b.b ENSGT00940000162447 ENSGT00940000158260 ENSGT00550000074850 ENSGT00390000015084.d ENSGT00940000157108 ENSGT00940000159307 ENSGT00940000155894 spretus MODERN SPECIES Xkr4 (MGP_SPRETEiJ_G0014722) MGP_SPRETEiJ_G0014723 Rp1 (MGP_SPRETEiJ_G0014724) Sox17 (MGP_SPRETEiJ_G0014725) Mrpl15 (MGP_SPRETEiJ_G0014726) Lypla1 (MGP_SPRETEiJ_G0014727) MGP_SPRETEiJ_G0014728 Tcea1 (MGP_SPRETEiJ_G0014729) MGP_SPRETEiJ_G0014730 Atp6v1h (MGP_SPRETEiJ_G0014731) Oprk1 (MGP_SPRETEiJ_G0014732) Npbwr1 (MGP_SPRETEiJ_G0014733) Rb1cc1 (MGP_SPRETEiJ_G0014734) MGP_SPRETEiJ_G0014735 St18 (MGP_SPRETEiJ_G0014736) Pcmtd1 (MGP_SPRETEiJ_G0014737) #22 Sntg1 (MGP_SPRETEiJ_G0014738) Rrs1 (MGP_SPRETEiJ_G0014739) Adhfe1 (MGP_SPRETEiJ_G0014740) Vxn (MGP_SPRETEiJ_G0014741) Mybl1 (MGP_SPRETEiJ_G0014742) Vcpip1 (MGP_SPRETEiJ_G0014743) Sgk3 (MGP_SPRETEiJ_G0014744) Mcmdc2 (MGP_SPRETEiJ_G0014745) Tcf24 (MGP_SPRETEiJ_G0014746) Ppp1r42 (MGP_SPRETEiJ_G0014747) Cops5 (MGP_SPRETEiJ_G0014748) MGP_SPRETEiJ_G0014749 Arfgef1 (MGP_SPRETEiJ_G0014750) Cpa6 (MGP_SPRETEiJ_G0014751) Prex2 (MGP_SPRETEiJ_G0014752) Steppe mouse MODERN SPECIES 2952 Npbwr1 (ENSMSIG00000027552) Rb1cc1 (ENSMSIG00000027558) Alkal1 (ENSMSIG00000027590) ENSMSIG00000027601 ENSMSIG00000027606 St18 (ENSMSIG00000027619) ENSMSIG00000027891 #22 Atlantogenata ANCESTRAL SPECIES 20 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 Afrotheria ANCESTRAL SPECIES 257 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159905 ENSGT00950000183032.A.a #22 Afrotheria_a ANCESTRAL SPECIES 261 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159905 ENSGT00950000183032.A.a #22 Elephant MODERN SPECIES 557 PLAG1 (ENSLAFG00000013617) MOS (ENSLAFG00000006188) ENSLAFG00000026686 RPS20 (ENSLAFG00000002515) LYN (ENSLAFG00000007811) TGS1 (ENSLAFG00000015386) TMEM68 (ENSLAFG00000014168) XKR4 (ENSLAFG00000008709) RP1 (ENSLAFG00000022734) SOX17 (ENSLAFG00000028829) MRPL15 (ENSLAFG00000008830) LYPLA1 (ENSLAFG00000028778) NPBWR1 (ENSLAFG00000001447) RB1CC1 (ENSLAFG00000015909) ST18 (ENSLAFG00000004212) PCMTD1 (ENSLAFG00000014089) #22 ENSLAFG00000027761 Hyrax MODERN SPECIES 5181 PCMTD1 (ENSPCAG00000011147) #22 Tenrec MODERN SPECIES 8071 PCMTD1 (ENSETEG00000005018) #22 Xenarthra ANCESTRAL SPECIES 309 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 Sloth MODERN SPECIES 5622 PCMTD1 (ENSCHOG00000012105) #22 Armadillo MODERN SPECIES 4058 ENSDNOG00000047002 ENSDNOG00000002743 ENSDNOG00000032973 ENSDNOG00000014959 MRPL15 (ENSDNOG00000048750) ENSDNOG00000041905 TCEA1 (ENSDNOG00000035288) RGS20 (ENSDNOG00000038623) ATP6V1H (ENSDNOG00000018864) OPRK1 (ENSDNOG00000019938) NPBWR1 (ENSDNOG00000003135) RB1CC1 (ENSDNOG00000041611) ALKAL1 (ENSDNOG00000016749) ST18 (ENSDNOG00000009682) PCMTD1 (ENSDNOG00000011826) #22 Marsupialia ANCESTRAL SPECIES 1 ENSGT00390000018056 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694.rb ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.e.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694.rb ENSGT00940000156694.qb ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.e.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Diprotodontia ANCESTRAL SPECIES 1 ENSGT00940000158011 ENSGT00390000018056 ENSGT00390000011782 ENSGT00940000154242.b ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000177933 ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.e.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Diprotodontia_a ANCESTRAL SPECIES ENSGT00940000158011 ENSGT00390000018056 ENSGT00390000011782 ENSGT00940000154242.b ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000177933 ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000159968 ENSGT00740000115534.a.b.e.a.a ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1199 ENSVURG00010000811 ENSVURG00010001002 ENSVURG00010001017 ENSVURG00010001059 ENSVURG00010001096 ENSVURG00010001104 ENSVURG00010001119 ENSVURG00010001140 ENSVURG00010001212 ENSVURG00010001248 ENSVURG00010001295 ENSVURG00010001312 ENSVURG00010001378 ENSVURG00010001434 ENSVURG00010001460 ENSVURG00010001530 #22 ENSVURG00010001692 ENSVURG00010001954 ENSVURG00010002009 ENSVURG00010002159 ENSVURG00010002312 PPDPFL (ENSVURG00010002320) ENSVURG00010002329 ENSVURG00010002357 ENSVURG00010002379 ENSVURG00010002385 ENSVURG00010002439 ENSVURG00010002613 ENSVURG00010002624 ENSVURG00010002656 ENSVURG00010002701 Common wonbat MODERN SPECIES 1048 ENSVURG00010006098 ENSVURG00010006034 ENSVURG00010005956 ENSVURG00010005920 ENSVURG00010005916 ENSVURG00010005902 ENSVURG00010005886 ENSVURG00010005848 ENSVURG00010005809 ENSVURG00010005778 ENSVURG00010005677 ENSVURG00010005668 ENSVURG00010005639 ENSVURG00010005623 ENSVURG00010005584 ENSVURG00010005504 #22 ENSVURG00010005493 ENSVURG00010005439 ENSVURG00010005347 ENSVURG00010005253 ENSVURG00010005188 ENSVURG00010005168 ENSVURG00010005149 ENSVURG00010005099 ENSVURG00010005061 ENSVURG00010004991 ENSVURG00010004818 ENSVURG00010004780 ENSVURG00010004710 ENSVURG00010004480 ENSVURG00010004469 koala MODERN SPECIES 46 ST18 (ENSPCIG00000027453) PCMTD1 (ENSPCIG00000006617) #22 PXDNL (ENSPCIG00000023871) SNTG1 (ENSPCIG00000000617) ENSPCIG00000011267 ENSPCIG00000031904 PPDPFL (ENSPCIG00000002032) SNAI2 (ENSPCIG00000025156) CLXN (ENSPCIG00000025158) ENSPCIG00000023033 MCM4 (ENSPCIG00000023029) PRKDC (ENSPCIG00000020925) ENSPCIG00000031800 ENSPCIG00000031715 ENSPCIG00000020828 ENSPCIG00000006572 ENSPCIG00000030795 Wallaby MODERN SPECIES 7626 ENSMEUG00000003207 #22 Tasmanian devil MODERN SPECIES XKR4 (ENSSHAG00000024606) ENSSHAG00000009787 ENSSHAG00000011351 ENSSHAG00000027123 MRPL15 (ENSSHAG00000013435) LYPLA1 (ENSSHAG00000027960) ENSSHAG00000025222 ENSSHAG00000023280 ENSSHAG00000026155 ATP6V1H (ENSSHAG00000014375) OPRK1 (ENSSHAG00000032283) NPBWR1 (ENSSHAG00000006572) RB1CC1 (ENSSHAG00000008684) ENSSHAG00000009637 ST18 (ENSSHAG00000012193) PCMTD1 (ENSSHAG00000013694) #22 PXDNL (ENSSHAG00000013921) SNTG1 (ENSSHAG00000025442) SNAI2 (ENSSHAG00000024855) CLXN (ENSSHAG00000008074) UBE2V2 (ENSSHAG00000026035) MCM4 (ENSSHAG00000017379) PRKDC (ENSSHAG00000014031) CEBPD (ENSSHAG00000024250) ENSSHAG00000014697 ENSSHAG00000007134 ENSSHAG00000007986 ENSSHAG00000029531 DTNA (ENSSHAG00000002569) NOL4 (ENSSHAG00000022558) ASXL3 (ENSSHAG00000008730) Opossum DUPLICATION Opossum MODERN SPECIES 2 ENSMODG00000009188 ENSMODG00000027805 ENSMODG00000024927 MRPL15 (ENSMODG00000009360) LYPLA1 (ENSMODG00000009367) ENSMODG00000009389 RGS20 (ENSMODG00000009398) ENSMODG00000024926 ATP6V1H (ENSMODG00000009431) ENSMODG00000040801 OPRK1 (ENSMODG00000009510) NPBWR1 (ENSMODG00000009573) RB1CC1 (ENSMODG00000009612) ENSMODG00000025613 ST18 (ENSMODG00000009635) PCMTD1 (ENSMODG00000009645) #22 PXDNL (ENSMODG00000009863) ENSMODG00000048688 SNTG1 (ENSMODG00000009907) ENSMODG00000024913 ENSMODG00000044518 ENSMODG00000050166 PPDPFL (ENSMODG00000028694) SNAI2 (ENSMODG00000010173) CLXN (ENSMODG00000010184) ENSMODG00000010191 ENSMODG00000010192 ENSMODG00000010213 PRKDC (ENSMODG00000010513) CEBPD (ENSMODG00000010525) ENSMODG00000010536 Opossum MODERN SPECIES FBXO11 (ENSMODG00000001160) ENSMODG00000051547 FOXN2 (ENSMODG00000001169) PPP1R21 (ENSMODG00000001186) STON1 (ENSMODG00000001190) ENSMODG00000043681 LHCGR (ENSMODG00000001240) FSHR (ENSMODG00000001267) ENSMODG00000050026 ENSMODG00000050387 ENSMODG00000047857 ENSMODG00000001301 NRXN1 (ENSMODG00000001531) ENSMODG00000023106 ENSMODG00000041639 ENSMODG00000004334 #22 ENSMODG00000040115 CHAC2 (ENSMODG00000001593) ASB3 (ENSMODG00000001584) ERLEC1 (ENSMODG00000001631) GPR75 (ENSMODG00000023107) PSME4 (ENSMODG00000001673) ENSMODG00000049670 ENSMODG00000045772 ENSMODG00000025768 SPTBN1 (ENSMODG00000001736) ENSMODG00000037328 EML6 (ENSMODG00000001783) RTN4 (ENSMODG00000001803) CLHC1 (ENSMODG00000001813) RPS27A (ENSMODG00000001819) Platypus MODERN SPECIES 18 TGS1 (ENSOANG00000021853) TMEM68 (ENSOANG00000005499) XKR4 (ENSOANG00000048684) ENSOANG00000007287 ENSOANG00000037085 ENSOANG00000039063 MRPL15 (ENSOANG00000007286) LYPLA1 (ENSOANG00000007285) TCEA1 (ENSOANG00000007284) ENSOANG00000007283 ATP6V1H (ENSOANG00000007281) OPRK1 (ENSOANG00000037553) RB1CC1 (ENSOANG00000007278) ENSOANG00000021848 ST18 (ENSOANG00000007275) PCMTD1 (ENSOANG00000007273) #22 PXDNL (ENSOANG00000007271) SNTG1 (ENSOANG00000007270) PPDPFL (ENSOANG00000007269) SNAI2 (ENSOANG00000007267) UBE2V2 (ENSOANG00000007266) MCM4 (ENSOANG00000007265) PRKDC (ENSOANG00000007264) ENSOANG00000051288 ENSOANG00000007260 ENSOANG00000005604 MAPRE2 (ENSOANG00000005605) DTNA (ENSOANG00000005607) NOL4 (ENSOANG00000005609) ASXL3 (ENSOANG00000005610) ENSOANG00000005611 Sauria ANCESTRAL SPECIES ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Lepidosauria ANCESTRAL SPECIES 2 ENSGT00390000011782.k.b.a ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 ENSGT00940000159556 Episquamata ANCESTRAL SPECIES 1 ENSGT00390000011782.k.b.a ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 ENSGT00940000159556 Toxicofera ANCESTRAL SPECIES 8 ENSGT00390000011782.k.b.a ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 ENSGT00940000166646 ENSGT00530000063834.e.a ENSGT00950000183111.b.a Elapidae ANCESTRAL SPECIES 8 ENSGT00390000011782.l.a.a ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121.a.a ENSGT00940000155121.b ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.m ENSGT00940000159969.a ENSGT00940000159905.a ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00960000192544 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 ENSGT00940000166646 ENSGT00530000063834.e.a ENSGT00950000182909.b.a.a Indian cobra MODERN SPECIES 2 ENSNNAG00000017346 ENSNNAG00000017341 XKR4 (ENSNNAG00000017337) ENSNNAG00000017280 SOX17 (ENSNNAG00000017262) MRPL15 (ENSNNAG00000017230) LYPLA1 (ENSNNAG00000017221) TCEA1 (ENSNNAG00000017209) ENSNNAG00000017201 ATP6V1H (ENSNNAG00000017193) OPRK1 (ENSNNAG00000017186) NPBWR1 (ENSNNAG00000017183) RB1CC1 (ENSNNAG00000017145) ALKAL1 (ENSNNAG00000017134) ST18 (ENSNNAG00000017018) PCMTD1 (ENSNNAG00000016981) #22 SNTG1 (ENSNNAG00000016965) ENSNNAG00000016959 UBE2V2 (ENSNNAG00000016952) MCM4 (ENSNNAG00000016935) PRKDC (ENSNNAG00000015678) SPIDR (ENSNNAG00000015492) MAPRE2 (ENSNNAG00000015462) ENSNNAG00000015442 ENSNNAG00000015400 ENSNNAG00000015369 ENSNNAG00000015361 NOL4 (ENSNNAG00000015349) ASXL3 (ENSNNAG00000015300) KLHL14 (ENSNNAG00000015223) ENSNNAG00000015202 Elapidae_a ANCESTRAL SPECIES 14 ENSGT00390000011782.l.a.a ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121.b ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.m ENSGT00940000159969.a ENSGT00390000015871.n ENSGT00940000159905.a ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00960000192544 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 ENSGT00940000166646 ENSGT00530000063834.e.a Acanthophiinae ANCESTRAL SPECIES 16 ENSGT00390000011782.l.a.a ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121.b ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.m ENSGT00940000159969.a ENSGT00390000015871.n ENSGT00940000159905.a ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00960000192544 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 ENSGT00940000166646 ENSGT00530000063834.e.a Eastern brown snake MODERN SPECIES 11 XKR4 (ENSPTXG00000001142) ENSPTXG00000001160 SOX17 (ENSPTXG00000001182) MRPL15 (ENSPTXG00000001187) LYPLA1 (ENSPTXG00000001193) TCEA1 (ENSPTXG00000001199) ENSPTXG00000001208 ATP6V1H (ENSPTXG00000001212) ENSPTXG00000001218 ENSPTXG00000001220 NPBWR1 (ENSPTXG00000001222) RB1CC1 (ENSPTXG00000001226) ALKAL1 (ENSPTXG00000001230) ENSPTXG00000001233 ST18 (ENSPTXG00000001238) PCMTD1 (ENSPTXG00000001249) #22 SNTG1 (ENSPTXG00000001256) ENSPTXG00000001260 UBE2V2 (ENSPTXG00000001263) ENSPTXG00000001270 PRKDC (ENSPTXG00000001486) SPIDR (ENSPTXG00000002357) MAPRE2 (ENSPTXG00000002362) DTNA (ENSPTXG00000002369) ENSPTXG00000002376 NOL4 (ENSPTXG00000002382) ENSPTXG00000002423 KLHL14 (ENSPTXG00000002427) ENSPTXG00000002432 GAREM1 (ENSPTXG00000002435) RNF138 (ENSPTXG00000002436) Mainland tiger snake MODERN SPECIES 32 ENSNSUG00000001013 ENSNSUG00000000965 XKR4 (ENSNSUG00000000961) ENSNSUG00000000948 SOX17 (ENSNSUG00000000947) MRPL15 (ENSNSUG00000000946) LYPLA1 (ENSNSUG00000000767) TCEA1 (ENSNSUG00000000729) RGS20 (ENSNSUG00000000718) ATP6V1H (ENSNSUG00000000390) OPRK1 (ENSNSUG00000000306) NPBWR1 (ENSNSUG00000000280) ENSNSUG00000000251 ENSNSUG00000000236 ST18 (ENSNSUG00000000187) PCMTD1 (ENSNSUG00000000182) #22 SNTG1 (ENSNSUG00000000093) ENSNSUG00000000060 UBE2V2 (ENSNSUG00000000038) MCM4 (ENSNSUG00000000013) PRKDC (ENSNSUG00000020198) CEBPD (ENSNSUG00000020197) ENSNSUG00000020196 SPIDR (ENSNSUG00000020195) ENSNSUG00000020194 MAPRE2 (ENSNSUG00000020193) ENSNSUG00000020192 ENSNSUG00000020191 NOL4 (ENSNSUG00000020180) ENSNSUG00000020179 KLHL14 (ENSNSUG00000020178) Blue-lipped sea krait MODERN SPECIES 1017 PCMTD1 (ENSLLTG00000002699) #22 Lizard MODERN SPECIES 821 PCMTD1 (ENSACAG00000017959) #22 SNTG1 (ENSACAG00000012344) ENSACAG00000040179 PPDPFL (ENSACAG00000037526) ENSACAG00000012332 UBE2V2 (ENSACAG00000012315) ENSACAG00000020934 ENSACAG00000044353 MCM4 (ENSACAG00000012157) PRKDC (ENSACAG00000012026) CEBPD (ENSACAG00000012009) SPIDR (ENSACAG00000011990) ENSACAG00000006867 MAPRE2 (ENSACAG00000006872) DTNA (ENSACAG00000006911) NOL4 (ENSACAG00000017885) Laterata ANCESTRAL SPECIES 5 ENSGT00390000011782.k.b.a ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00960000192544 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 ENSGT00940000159556 Common wall lizard MODERN SPECIES 15 ENSPMRG00000004330 ENSPMRG00000004339 XKR4 (ENSPMRG00000004346) ENSPMRG00000004363 SOX17 (ENSPMRG00000004458) MRPL15 (ENSPMRG00000004469) LYPLA1 (ENSPMRG00000004479) TCEA1 (ENSPMRG00000004488) RGS20 (ENSPMRG00000004503) ATP6V1H (ENSPMRG00000004521) OPRK1 (ENSPMRG00000004539) NPBWR1 (ENSPMRG00000004547) RB1CC1 (ENSPMRG00000004572) ALKAL1 (ENSPMRG00000004608) ST18 (ENSPMRG00000004640) PCMTD1 (ENSPMRG00000004718) #22 ENSPMRG00000004722 SNTG1 (ENSPMRG00000004728) PPDPFL (ENSPMRG00000004740) SNAI2 (ENSPMRG00000004744) UBE2V2 (ENSPMRG00000004746) MCM4 (ENSPMRG00000004750) PRKDC (ENSPMRG00000004815) CEBPD (ENSPMRG00000004903) ENSPMRG00000004912 ENSPMRG00000004923 MAPRE2 (ENSPMRG00000004926) DTNA (ENSPMRG00000004954) NOL4 (ENSPMRG00000004993) ASXL3 (ENSPMRG00000005002) ENSPMRG00000005009 Argentine black and white tegu MODERN SPECIES 4 ENSSMRG00000010481 ENSSMRG00000010484 XKR4 (ENSSMRG00000010501) ENSSMRG00000010529 SOX17 (ENSSMRG00000010532) MRPL15 (ENSSMRG00000010567) LYPLA1 (ENSSMRG00000010569) TCEA1 (ENSSMRG00000010570) RGS20 (ENSSMRG00000010572) ATP6V1H (ENSSMRG00000010676) OPRK1 (ENSSMRG00000010677) NPBWR1 (ENSSMRG00000010681) RB1CC1 (ENSSMRG00000010774) ALKAL1 (ENSSMRG00000010815) ST18 (ENSSMRG00000010953) PCMTD1 (ENSSMRG00000010954) #22 SNTG1 (ENSSMRG00000010983) ENSSMRG00000011028 UBE2V2 (ENSSMRG00000011047) MCM4 (ENSSMRG00000011050) PRKDC (ENSSMRG00000011051) CEBPD (ENSSMRG00000011054) SPIDR (ENSSMRG00000011112) ENSSMRG00000011115 MAPRE2 (ENSSMRG00000011156) DTNA (ENSSMRG00000011231) NOL4 (ENSSMRG00000011346) ASXL3 (ENSSMRG00000011389) KLHL14 (ENSSMRG00000011416) ENSSMRG00000011417 GAREM1 (ENSSMRG00000011463) tuatara MODERN SPECIES 825 RB1CC1 (ENSSPUG00000008788) ALKAL1 (ENSSPUG00000008774) ST18 (ENSSPUG00000008746) PCMTD1 (ENSSPUG00000008731) #22 Archelosauria ANCESTRAL SPECIES 5 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 Cryptodira ANCESTRAL SPECIES 7 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 Testudinoidea ANCESTRAL SPECIES ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.p ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT00990000208485 ENSGT01050000244824.A.o.b ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Testudinidae ANCESTRAL SPECIES 4 ENSGT00390000011782.k.a.a.d ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.p ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT00990000208485 ENSGT01050000244824.A.o.b ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000171212 ENSGT00940000159556 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 516 ST18 (ENSCABG00000003154) ENSCABG00000003161 #22 ENSCABG00000003163 #22 Abingdon island giant tortoise MODERN SPECIES 516 ST18 (ENSCABG00000003154) ENSCABG00000003161 #22 ENSCABG00000003163 #22 Abingdon island giant tortoise MODERN SPECIES 2319 ENSCABG00000017856 #22 ZNF330 (ENSCABG00000017859) RNF150 (ENSCABG00000017862) TBC1D9 (ENSCABG00000017869) ELMOD2 (ENSCABG00000017966) MGAT4D (ENSCABG00000017979) CLGN (ENSCABG00000017985) SCOC (ENSCABG00000018050) FGF10 (ENSCABG00000018055) MRPS30 (ENSCABG00000018056) HCN1 (ENSCABG00000018058) EMB (ENSCABG00000018061) PARP8 (ENSCABG00000018062) ISL1 (ENSCABG00000018071) Goode s thornscrub tortoise MODERN SPECIES 11 RP1 (ENSGEVG00005013330) ENSGEVG00005013252 ENSGEVG00005013226 ENSGEVG00005013190 MRPL15 (ENSGEVG00005013170) LYPLA1 (ENSGEVG00005013145) TCEA1 (ENSGEVG00005013120) ENSGEVG00005013082 ATP6V1H (ENSGEVG00005013024) OPRK1 (ENSGEVG00005012897) NPBWR1 (ENSGEVG00005012868) ENSGEVG00005012835 ENSGEVG00005012810 ENSGEVG00005012796 ST18 (ENSGEVG00005012602) PCMTD1 (ENSGEVG00005012573) #22 ENSGEVG00005012535 SNTG1 (ENSGEVG00005012396) PPDPFL (ENSGEVG00005012360) SNAI2 (ENSGEVG00005012324) UBE2V2 (ENSGEVG00005012306) ENSGEVG00005012263 ENSGEVG00005012212 ENSGEVG00005012159 PRKDC (ENSGEVG00005011992) ENSGEVG00005011938 SPIDR (ENSGEVG00005011834) MAPRE2 (ENSGEVG00005011777) ENSGEVG00005011712 ENSGEVG00005010936 NOL4 (ENSGEVG00005010489) Emydidae ANCESTRAL SPECIES ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871.p ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT00990000208485 ENSGT01050000244824.A.o.b ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Three-toed box turtle MODERN SPECIES 24 ENSTMTG00000013705 ENSTMTG00000013682 XKR4 (ENSTMTG00000013667) RP1 (ENSTMTG00000013533) ENSTMTG00000013517 MRPL15 (ENSTMTG00000013499) LYPLA1 (ENSTMTG00000013477) TCEA1 (ENSTMTG00000013459) ENSTMTG00000013452 ATP6V1H (ENSTMTG00000013418) OPRK1 (ENSTMTG00000013409) NPBWR1 (ENSTMTG00000013404) RB1CC1 (ENSTMTG00000013284) ALKAL1 (ENSTMTG00000013247) ENSTMTG00000013188 PCMTD1 (ENSTMTG00000013176) #22 PXDNL (ENSTMTG00000013000) ENSTMTG00000012975 SNTG1 (ENSTMTG00000012919) PPDPFL (ENSTMTG00000012894) SNAI2 (ENSTMTG00000012879) UBE2V2 (ENSTMTG00000012869) ENSTMTG00000012856 MCM4 (ENSTMTG00000012841) PRKDC (ENSTMTG00000005625) CEBPD (ENSTMTG00000005098) ENSTMTG00000005084 SPIDR (ENSTMTG00000005035) ENSTMTG00000004994 MAPRE2 (ENSTMTG00000004961) DTNA (ENSTMTG00000004725) painted turtle MODERN SPECIES 706 ALKAL1 (ENSCPBG00000020151) ST18 (ENSCPBG00000020161) PCMTD1 (ENSCPBG00000020171) #22 PXDNL (ENSCPBG00000020180) SNTG1 (ENSCPBG00000020223) DEGS1 (ENSCPBG00000020241) SNAI2 (ENSCPBG00000020255) UBE2V2 (ENSCPBG00000020282) ENSCPBG00000020293 ENSCPBG00000020295 MCM4 (ENSCPBG00000020300) PRKDC (ENSCPBG00000020412) CEBPD (ENSCPBG00000020929) SPIDR (ENSCPBG00000020930) ENSCPBG00000020935 ENSCPBG00000020938 MAPRE2 (ENSCPBG00000020942) DTNA (ENSCPBG00000020950) Chinese turtle MODERN SPECIES 195 SOX17 (ENSPSIG00000009504) MRPL15 (ENSPSIG00000008837) LYPLA1 (ENSPSIG00000006862) ENSPSIG00000006567 TCEA1 (ENSPSIG00000017873) RGS20 (ENSPSIG00000017623) ATP6V1H (ENSPSIG00000016999) OPRK1 (ENSPSIG00000015927) NPBWR1 (ENSPSIG00000001904) RB1CC1 (ENSPSIG00000015127) ALKAL1 (ENSPSIG00000014916) ST18 (ENSPSIG00000011125) PCMTD1 (ENSPSIG00000008168) #22 ENSPSIG00000001901 SNTG1 (ENSPSIG00000017001) ENSPSIG00000001899 PPDPFL (ENSPSIG00000016574) SNAI2 (ENSPSIG00000016395) ENSPSIG00000016251 ENSPSIG00000015994 UBE2V2 (ENSPSIG00000014938) ENSPSIG00000013847 ENSPSIG00000013668 PRKDC (ENSPSIG00000017043) Archosauria ANCESTRAL SPECIES ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00940000163562 ENSGT00950000182863.B.a ENSGT00800000125285 ENSGT00940000168921 ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d Aves ANCESTRAL SPECIES 9 ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00800000125285 ENSGT00940000168921 ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 Neognathae ANCESTRAL SPECIES ENSGT01070000253766.A.b ENSGT00940000164647 ENSGT00940000154242.b ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00800000125285 ENSGT00940000168921 ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 Neognathae_b ANCESTRAL SPECIES 3 ENSGT00390000011782.k.b ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00800000125285 ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 Passeriformes ANCESTRAL SPECIES ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000175507 ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00800000125285 ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 Great tit MODERN SPECIES 11 TGS1 (ENSPMJG00000015706) ENSPMJG00000015705 ENSPMJG00000015704 XKR4 (ENSPMJG00000015703) ENSPMJG00000015702 MRPL15 (ENSPMJG00000015701) LYPLA1 (ENSPMJG00000015700) TCEA1 (ENSPMJG00000015699) RGS20 (ENSPMJG00000015698) ATP6V1H (ENSPMJG00000015697) OPRK1 (ENSPMJG00000015696) NPBWR1 (ENSPMJG00000015695) RB1CC1 (ENSPMJG00000015694) ALKAL1 (ENSPMJG00000015693) ST18 (ENSPMJG00000015692) PCMTD1 (ENSPMJG00000015691) #22 SNTG1 (ENSPMJG00000015689) ENSPMJG00000015688 ENSPMJG00000015686 UBE2V2 (ENSPMJG00000015681) MCM4 (ENSPMJG00000015679) PRKDC (ENSPMJG00000014775) CEBPD (ENSPMJG00000014773) SPIDR (ENSPMJG00000014769) ENSPMJG00000014768 MAPRE2 (ENSPMJG00000014767) DTNA (ENSPMJG00000014766) NOL4 (ENSPMJG00000014765) ASXL3 (ENSPMJG00000014764) KLHL14 (ENSPMJG00000014762) ENSPMJG00000014761 Passeriformes_d ANCESTRAL SPECIES ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000175507 ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00800000125285 ENSGT00940000154511.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 Flycatcher MODERN SPECIES 11 TGS1 (ENSFALG00000010249) TMEM68 (ENSFALG00000010240) XKR4 (ENSFALG00000027258) ENSFALG00000010225 ENSFALG00000028228 MRPL15 (ENSFALG00000010221) LYPLA1 (ENSFALG00000028510) TCEA1 (ENSFALG00000022921) RGS20 (ENSFALG00000025416) ATP6V1H (ENSFALG00000010211) OPRK1 (ENSFALG00000010203) NPBWR1 (ENSFALG00000014791) RB1CC1 (ENSFALG00000010200) ALKAL1 (ENSFALG00000028062) ST18 (ENSFALG00000010174) PCMTD1 (ENSFALG00000010160) #22 SNTG1 (ENSFALG00000005741) PPDPFL (ENSFALG00000005757) ENSFALG00000005762 UBE2V2 (ENSFALG00000005769) MCM4 (ENSFALG00000005778) PRKDC (ENSFALG00000005785) CEBPD (ENSFALG00000014184) SPIDR (ENSFALG00000023516) ENSFALG00000024294 ENSFALG00000023348 MAPRE2 (ENSFALG00000005847) DTNA (ENSFALG00000005863) NOL4 (ENSFALG00000005872) ASXL3 (ENSFALG00000005882) KLHL14 (ENSFALG00000005889) Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000175507 ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 ENSGT00940000166646 Passeroidea ANCESTRAL SPECIES 2 ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000175507 ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154681.a ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00940000164631 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 ENSGT00940000166646 Common canary MODERN SPECIES ENSSCAG00000012830 ENSSCAG00000012825 XKR4 (ENSSCAG00000012812) ENSSCAG00000012792 ENSSCAG00000012784 MRPL15 (ENSSCAG00000012779) LYPLA1 (ENSSCAG00000012773) TCEA1 (ENSSCAG00000012765) RGS20 (ENSSCAG00000012762) ATP6V1H (ENSSCAG00000012757) OPRK1 (ENSSCAG00000012744) NPBWR1 (ENSSCAG00000012738) RB1CC1 (ENSSCAG00000012728) ALKAL1 (ENSSCAG00000012718) ST18 (ENSSCAG00000012704) PCMTD1 (ENSSCAG00000012702) #22 SNTG1 (ENSSCAG00000012661) ENSSCAG00000012644 ENSSCAG00000012634 UBE2V2 (ENSSCAG00000012600) MCM4 (ENSSCAG00000012481) PRKDC (ENSSCAG00000012431) SPIDR (ENSSCAG00000012410) ENSSCAG00000012390 MAPRE2 (ENSSCAG00000012383) DTNA (ENSSCAG00000012321) NOL4 (ENSSCAG00000012253) ASXL3 (ENSSCAG00000012233) KLHL14 (ENSSCAG00000012201) ENSSCAG00000012193 GAREM1 (ENSSCAG00000012179) Zebra finch MODERN SPECIES 12 ENSTGUG00000011045 XKR4 (ENSTGUG00000022313) ENSTGUG00000023508 ENSTGUG00000024246 SOX17 (ENSTGUG00000011034) MRPL15 (ENSTGUG00000011032) LYPLA1 (ENSTGUG00000021368) TCEA1 (ENSTGUG00000011012) RGS20 (ENSTGUG00000011005) ATP6V1H (ENSTGUG00000010996) OPRK1 (ENSTGUG00000010985) NPBWR1 (ENSTGUG00000010979) RB1CC1 (ENSTGUG00000010964) ALKAL1 (ENSTGUG00000025647) ST18 (ENSTGUG00000010944) PCMTD1 (ENSTGUG00000010939) #22 SNTG1 (ENSTGUG00000010922) ENSTGUG00000010914 UBE2V2 (ENSTGUG00000010911) MCM4 (ENSTGUG00000010897) PRKDC (ENSTGUG00000010840) CEBPD (ENSTGUG00000010839) ENSTGUG00000010827 ENSTGUG00000010830 ENSTGUG00000010825 MAPRE2 (ENSTGUG00000010816) DTNA (ENSTGUG00000010797) NOL4 (ENSTGUG00000010787) ASXL3 (ENSTGUG00000010779) KLHL14 (ENSTGUG00000010774) ENSTGUG00000010771 Medium ground finch MODERN SPECIES 8 LYN (ENSGFOG00000003118) TGS1 (ENSGFOG00000003094) ENSGFOG00000003078 ENSGFOG00000003064 ENSGFOG00000002930 MRPL15 (ENSGFOG00000002908) LYPLA1 (ENSGFOG00000002893) TCEA1 (ENSGFOG00000002840) RGS20 (ENSGFOG00000002818) ATP6V1H (ENSGFOG00000002804) OPRK1 (ENSGFOG00000002797) NPBWR1 (ENSGFOG00000002789) RB1CC1 (ENSGFOG00000002654) ALKAL1 (ENSGFOG00000002621) ST18 (ENSGFOG00000002585) PCMTD1 (ENSGFOG00000002571) #22 SNTG1 (ENSGFOG00000002553) ENSGFOG00000002544 ENSGFOG00000002532 SNAI2 (ENSGFOG00000002516) UBE2V2 (ENSGFOG00000002511) MCM4 (ENSGFOG00000009878) ENSGFOG00000009869 PRKDC (ENSGFOG00000006872) SPIDR (ENSGFOG00000006687) ENSGFOG00000006679 MAPRE2 (ENSGFOG00000006641) DTNA (ENSGFOG00000006605) NOL4 (ENSGFOG00000006572) ASXL3 (ENSGFOG00000006560) KLHL14 (ENSGFOG00000006549) Neognathae_c ANCESTRAL SPECIES 1 ENSGT00390000011782.k.b ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000159556 ENSGT00940000166646 ENSGT00530000063834.e.a Kakapo MODERN SPECIES ENSSHBG00005003951 ENSSHBG00005003964 XKR4 (ENSSHBG00005003977) ENSSHBG00005003992 SOX17 (ENSSHBG00005004021) MRPL15 (ENSSHBG00005004022) LYPLA1 (ENSSHBG00005004028) TCEA1 (ENSSHBG00005004032) RGS20 (ENSSHBG00005004043) ATP6V1H (ENSSHBG00005004054) OPRK1 (ENSSHBG00005004058) NPBWR1 (ENSSHBG00005004062) RB1CC1 (ENSSHBG00005004068) ALKAL1 (ENSSHBG00005004074) ST18 (ENSSHBG00005004087) PCMTD1 (ENSSHBG00005004109) #22 ENSSHBG00005004115 SNTG1 (ENSSHBG00005004119) ENSSHBG00005004127 ENSSHBG00005004128 PPDPFL (ENSSHBG00005004138) ENSSHBG00005004140 UBE2V2 (ENSSHBG00005004145) MCM4 (ENSSHBG00005004173) PRKDC (ENSSHBG00005004378) CEBPD (ENSSHBG00005004497) SPIDR (ENSSHBG00005000553) ENSSHBG00005000555 MAPRE2 (ENSSHBG00005000557) DTNA (ENSSHBG00005000567) NOL4 (ENSSHBG00005000570) Golden eagle MODERN SPECIES 20 ENSACCG00020004218 XKR4 (ENSACCG00020004225) ENSACCG00020004270 ENSACCG00020004307 ENSACCG00020004317 MRPL15 (ENSACCG00020004324) LYPLA1 (ENSACCG00020004335) TCEA1 (ENSACCG00020004347) RGS20 (ENSACCG00020004352) ATP6V1H (ENSACCG00020004369) OPRK1 (ENSACCG00020004384) NPBWR1 (ENSACCG00020004389) RB1CC1 (ENSACCG00020004395) ALKAL1 (ENSACCG00020004405) ST18 (ENSACCG00020004417) PCMTD1 (ENSACCG00020004427) #22 SNTG1 (ENSACCG00020004440) PPDPFL (ENSACCG00020004450) ENSACCG00020004456 UBE2V2 (ENSACCG00020004464) MCM4 (ENSACCG00020004473) PRKDC (ENSACCG00020004704) ENSACCG00020004799 SPIDR (ENSACCG00020004859) ENSACCG00020004969 MAPRE2 (ENSACCG00020004984) DTNA (ENSACCG00020005033) NOL4 (ENSACCG00020005087) ENSACCG00020005097 KLHL14 (ENSACCG00020005113) ENSACCG00020005127 Galloanserae ANCESTRAL SPECIES ENSGT00940000154242.b.f ENSGT00940000164647.b ENSGT00940000154242.b.e ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000168921 ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000164647.b ENSGT00940000164647.a ENSGT00940000154242.b.e ENSGT00940000156694 ENSGT00940000175507 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a.h ENSGT00390000009113.a.b ENSGT00940000168921 ENSGT00740000115534.a.b.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992.b ENSGT00520000055578.a.a.d ENSGT00940000166855 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00390000011782.l ENSGT01070000253766.A.b ENSGT00940000164647.b ENSGT00940000164647.a ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a.h ENSGT00390000009113.a.b ENSGT00940000168921 ENSGT00740000115534.a.b.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00940000164631 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992.b ENSGT00520000055578.a.a.d ENSGT00940000166855 Chicken MODERN SPECIES 11 TMEM68 (ENSGALG00010006084) XKR4 (ENSGALG00010004583) ENSGALG00010004565 sox17 (ENSGALG00010004516) SOX17 (ENSGALG00010004503) MRPL15 (ENSGALG00010004495) LYPLA1 (ENSGALG00010004468) TCEA1 (ENSGALG00010004430) RGS20 (ENSGALG00010004404) ATP6V1H (ENSGALG00010004370) OPRK1 (ENSGALG00010003892) NPBWR1 (ENSGALG00010004089) RB1CC1 (ENSGALG00010004085) ALKAL1 (ENSGALG00010004068) ST18 (ENSGALG00010004132) PCMTD1 (ENSGALG00010004102) #22 SNTG1 (ENSGALG00010003965) C8orf22 (ENSGALG00010005494) ENSGALG00010005487 ENSGALG00010005479 UBE2V2 (ENSGALG00010005441) MCM4 (ENSGALG00010005430) PRKDC (ENSGALG00010005415) CEBPD (ENSGALG00010005405) ENSGALG00010006151 ENSGALG00010005403 ENSGALG00010005395 MAPRE2 (ENSGALG00010005384) DTNA (ENSGALG00010005351) NOL4 (ENSGALG00010005319) ASXL3 (ENSGALG00010005309) Turkey MODERN SPECIES 22 ENSMGAG00000018565 ENSMGAG00000019044 ENSMGAG00000010657 ENSMGAG00000022944 ENSMGAG00000010690 ENSMGAG00000010705 ENSMGAG00000010708 ENSMGAG00000010711 ENSMGAG00000010785 ENSMGAG00000010806 ENSMGAG00000020855 ENSMGAG00000010813 PPDPFL (ENSMGAG00000021330) ENSMGAG00000010820 ENSMGAG00000019025 ENSMGAG00000010842 #22 ENSMGAG00000021300 ENSMGAG00000010851 ENSMGAG00000019994 ENSMGAG00000018029 CDH2 (ENSMGAG00000010400) CHST9 (ENSMGAG00000010389) AQP4 (ENSMGAG00000010390) KCTD1 (ENSMGAG00000010382) TAF4B (ENSMGAG00000010380) SS18 (ENSMGAG00000010358) ZNF521 (ENSMGAG00000010352) ENSMGAG00000020694 ENSMGAG00000010333 IMPACT (ENSMGAG00000010303) OSBPL1A (ENSMGAG00000010264) Japanese quail MODERN SPECIES 11 ENSCJPG00005010397 ENSCJPG00005010396 ENSCJPG00005010395 ENSCJPG00005010394 ENSCJPG00005010393 MRPL15 (ENSCJPG00005010389) LYPLA1 (ENSCJPG00005010388) TCEA1 (ENSCJPG00005010387) RGS20 (ENSCJPG00005010386) ATP6V1H (ENSCJPG00005010385) OPRK1 (ENSCJPG00005010383) NPBWR1 (ENSCJPG00005010382) RB1CC1 (ENSCJPG00005010381) ALKAL1 (ENSCJPG00005010380) ST18 (ENSCJPG00005010379) PCMTD1 (ENSCJPG00005010378) #22 SNTG1 (ENSCJPG00005010374) ENSCJPG00005010371 ENSCJPG00005010366 UBE2V2 (ENSCJPG00005010359) MCM4 (ENSCJPG00005010358) PRKDC (ENSCJPG00005009994) CEBPD (ENSCJPG00005009986) SPIDR (ENSCJPG00005009985) ENSCJPG00005009984 MAPRE2 (ENSCJPG00005009982) DTNA (ENSCJPG00005009975) NOL4 (ENSCJPG00005009965) ASXL3 (ENSCJPG00005009958) ENSCJPG00005009955 KLHL14 (ENSCJPG00005009941) Anatidae ANCESTRAL SPECIES 3 ENSGT01070000253766.A.b ENSGT00940000154242.b.f ENSGT00940000164647.b ENSGT00940000154242.b.e ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00390000009113.a.b ENSGT00940000168921 ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00990000204685 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 Duck MODERN SPECIES 10 IMPA2 (ENSAPLG00000021120) CIDEA (ENSAPLG00000011917) TUBB6 (ENSAPLG00000011845) AFG3L2 (ENSAPLG00000011183) PRELID3A (ENSAPLG00000010888) SPIRE1 (ENSAPLG00000010595) ENSAPLG00000010185 ENSAPLG00000020037 PSMG2 (ENSAPLG00000010098) PTPN2 (ENSAPLG00000009603) ENSAPLG00000000790 RB1CC1 (ENSAPLG00000003339) ENSAPLG00000016796 ALKAL1 (ENSAPLG00000017834) ST18 (ENSAPLG00000003822) PCMTD1 (ENSAPLG00000021741) #22 SNTG1 (ENSAPLG00000003975) ENSAPLG00000003920 UBE2V2 (ENSAPLG00000022160) MCM4 (ENSAPLG00000003491) PRKDC (ENSAPLG00000002697) CEBPD (ENSAPLG00000019306) ENSAPLG00000023254 ENSAPLG00000002521 MAPRE2 (ENSAPLG00000016320) DTNA (ENSAPLG00000015988) ENSAPLG00000025789 NOL4 (ENSAPLG00000006341) ENSAPLG00000006441 ENSAPLG00000017722 ENSAPLG00000029474 Pink-footed goose MODERN SPECIES 13 OPRK1 (ENSABRG00000012517) NPBWR1 (ENSABRG00000012520) RB1CC1 (ENSABRG00000012521) ALKAL1 (ENSABRG00000012532) ST18 (ENSABRG00000012541) PCMTD1 (ENSABRG00000012559) #22 SNTG1 (ENSABRG00000012576) PPDPFL (ENSABRG00000012606) ENSABRG00000012623 ENSABRG00000012630 UBE2V2 (ENSABRG00000012641) MCM4 (ENSABRG00000012661) PRKDC (ENSABRG00000013205) CEBPD (ENSABRG00000015622) SPIDR (ENSABRG00000015629) ENSABRG00000015642 ENSABRG00000015652 MAPRE2 (ENSABRG00000015659) DTNA (ENSABRG00000015688) NOL4 (ENSABRG00000015729) ENSABRG00000015735 African ostrich MODERN SPECIES 546 DNAI3 (ENSSCUG00000006232) SYDE2 (ENSSCUG00000006228) ENSSCUG00000006225 DDAH1 (ENSSCUG00000006224) CCN1 (ENSSCUG00000006221) ZNHIT6 (ENSSCUG00000006216) ENSSCUG00000006212 ENSSCUG00000006209 ODF2L (ENSSCUG00000006202) CLCA2 (ENSSCUG00000006198) ENSSCUG00000006195 ENSSCUG00000006192 SH3GLB1 (ENSSCUG00000006185) ENSSCUG00000006175 HS2ST1 (ENSSCUG00000006172) PCMTD1 (ENSSCUG00000006158) #22 ENSSCUG00000006150 SNTG1 (ENSSCUG00000006141) Australian saltwater crocodile MODERN SPECIES ENSCPRG00005016312 ENSCPRG00005016293 XKR4 (ENSCPRG00005016282) ENSCPRG00005016245 MRPL15 (ENSCPRG00005016215) LYPLA1 (ENSCPRG00005016196) TCEA1 (ENSCPRG00005016187) RGS20 (ENSCPRG00005016184) ATP6V1H (ENSCPRG00005016178) OPRK1 (ENSCPRG00005016155) ENSCPRG00005016154 NPBWR1 (ENSCPRG00005016153) RB1CC1 (ENSCPRG00005016150) ALKAL1 (ENSCPRG00005016144) ST18 (ENSCPRG00005016142) PCMTD1 (ENSCPRG00005016138) #22 PXDNL (ENSCPRG00005016130) ENSCPRG00005016128 SNTG1 (ENSCPRG00005016125) ENSCPRG00005016119 ENSCPRG00005016116 ENSCPRG00005016112 UBE2V2 (ENSCPRG00005016092) MCM4 (ENSCPRG00005016083) PRKDC (ENSCPRG00005015476) ENSCPRG00005015317 CEBPD (ENSCPRG00005015316) SPIDR (ENSCPRG00005015312) ENSCPRG00005015309 ENSCPRG00005015308 MAPRE2 (ENSCPRG00005015306) Anura ANCESTRAL SPECIES 1 ENSGT00390000011782 ENSGT01070000253766.A.b ENSGT00940000154242.b ENSGT00940000156694 ENSGT00390000009040 ENSGT00940000154185 ENSGT00940000155121 ENSGT00940000159123 ENSGT00390000003289 ENSGT00940000157341 ENSGT00940000161936 ENSGT00940000156037.a.c.b ENSGT00390000015871 ENSGT00940000159969.a ENSGT00940000159905 ENSGT00950000183032.A.a #22 ENSGT00950000182863.B.a ENSGT00940000154511.b ENSGT00940000168921 ENSGT00740000115534.a.b ENSGT01050000244824.A ENSGT00940000155633.D ENSGT00940000163032 ENSGT00390000014654 ENSGT00950000183117.b ENSGT00490000043329.a.a.b ENSGT00940000153897.a ENSGT00940000159992 ENSGT00520000055578.a.a.d ENSGT00940000166855 ENSGT00940000159556 Frog MODERN SPECIES 6 xkr4 (ENSXETG00000040558) ENSXETG00000046099 ENSXETG00000039668 sox17a (ENSXETG00000026438) mrpl15 (ENSXETG00000008103) lypla1 (ENSXETG00000008101) tcea1 (ENSXETG00000008099) rgs20 (ENSXETG00000008098) atp6v1h (ENSXETG00000008095) oprk1 (ENSXETG00000008092) npbwr2 (ENSXETG00000005682) ENSXETG00000035796 rb1cc1 (ENSXETG00000005678) alkal1 (ENSXETG00000041022) st18 (ENSXETG00000005673) PCMTD1 (ENSXETG00000033680) #22 sntg1 (ENSXETG00000005667) ENSXETG00000040031 snai2 (ENSXETG00000024006) ENSXETG00000041725 XB22062446 [provisional] (ENSXETG00000036668) ube2v2 (ENSXETG00000048783) mcm4 (ENSXETG00000004854) prkdc (ENSXETG00000004851) cebpd (ENSXETG00000039828) sox6 (ENSXETG00000004847) ENSXETG00000035118 mapre2 (ENSXETG00000035703) dtna (ENSXETG00000040360) ENSXETG00000047597 nol4 (ENSXETG00000020548) Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000007683 ENSLLEG00000007695 MRPL15 (ENSLLEG00000007717) LYPLA1 (ENSLLEG00000007812) TCEA1 (ENSLLEG00000007847) RGS20 (ENSLLEG00000007897) ATP6V1H (ENSLLEG00000008003) OPRK1 (ENSLLEG00000008954) NPBWR1 (ENSLLEG00000009003) ENSLLEG00000009056 RB1CC1 (ENSLLEG00000009254) ALKAL1 (ENSLLEG00000009469) ENSLLEG00000009614 ENSLLEG00000009643 ENSLLEG00000009701 PCMTD1 (ENSLLEG00000010301) #22 ENSLLEG00000010405 SNTG1 (ENSLLEG00000010468) ENSLLEG00000011046 ENSLLEG00000011159 ENSLLEG00000011182 ENSLLEG00000011206 ENSLLEG00000011259 ENSLLEG00000011303 UBE2V2 (ENSLLEG00000011624) MCM4 (ENSLLEG00000011829) PRKDC (ENSLLEG00000012585) CEBPD (ENSLLEG00000020717) SPIDR (ENSLLEG00000020740) ENSLLEG00000020944 ENSLLEG00000021255 Coelacanth MODERN SPECIES 571 ST18 (ENSLACG00000008399) ENSLACG00000004244 ENSLACG00000006671 PCMTD1 (ENSLACG00000011428) #22 PXDNL (ENSLACG00000014500) ENSLACG00000015307 ENSLACG00000015748 Elephant shark MODERN SPECIES 1635 mrpl15 (ENSCMIG00000015660) lypla1 (ENSCMIG00000015650) tcea1 (ENSCMIG00000015644) ENSCMIG00000015641 atp6v1h (ENSCMIG00000015618) ENSCMIG00000015603 ENSCMIG00000015602 RB1CC1 (ENSCMIG00000015561) ENSCMIG00000015537 ENSCMIG00000015534 ST18 (ENSCMIG00000015375) PCMTD1 (ENSCMIG00000015320) #22 ENSCMIG00000015295 SNTG1 (ENSCMIG00000015258)