Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000158966 #22
Euteleostomi	ANCESTRAL SPECIES	317				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22
Sarcopterygii	ANCESTRAL SPECIES	308				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22
Tetrapoda	ANCESTRAL SPECIES	186				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00990000210324	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024
Theria	ANCESTRAL SPECIES	12	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00990000210324	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29
Eutheria	ANCESTRAL SPECIES					ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00990000210324	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35
Boreoeutheria	ANCESTRAL SPECIES				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Euarchontoglires	ANCESTRAL SPECIES				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Euarchontoglires_A	ANCESTRAL SPECIES					ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Glires	ANCESTRAL SPECIES					ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Rodentia	ANCESTRAL SPECIES	24				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Rodentia_B	ANCESTRAL SPECIES	32				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Myomorpha	ANCESTRAL SPECIES	34				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Muroidea	ANCESTRAL SPECIES	35				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000160625 #7	ENSGT00390000018903 #8	ENSGT00390000009477 #9	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000160625 #7	ENSGT00390000018903 #8	ENSGT00390000009477 #9	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00940000160625 #7	ENSGT00390000018903 #8	ENSGT00390000009477 #9	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Shrew mouse	MODERN SPECIES	12	Afg3l1 (MGP_PahariEiJ_G0023290) #7	MGP_PahariEiJ_G0023291 #8	Gas8 (MGP_PahariEiJ_G0023292) #9	Rhou (MGP_PahariEiJ_G0023293) #10	Rab4a (MGP_PahariEiJ_G0023294) #11	Ccsap (MGP_PahariEiJ_G0023295) #12	Acta1 (MGP_PahariEiJ_G0023296) #13	Nup133 (MGP_PahariEiJ_G0023297) #14	Abcb10 (MGP_PahariEiJ_G0023298) #15	Taf5l (MGP_PahariEiJ_G0023299) #16	MGP_PahariEiJ_G0023300 #17	Galnt2 (MGP_PahariEiJ_G0023301) #18	Pgbd5 (MGP_PahariEiJ_G0023302) #19	Cog2 (MGP_PahariEiJ_G0023303) #20	Agt (MGP_PahariEiJ_G0023304) #21	Capn9 (MGP_PahariEiJ_G0023305) #22	2310022B05Rik (MGP_PahariEiJ_G0023306) #23	Ttc13 (MGP_PahariEiJ_G0023307) #24	Arv1 (MGP_PahariEiJ_G0023308) #25	Fam89a (MGP_PahariEiJ_G0023309) #26	Trim67 (MGP_PahariEiJ_G0023310) #27	2810004N23Rik (MGP_PahariEiJ_G0023311) #28	Gnpat (MGP_PahariEiJ_G0023312) #29	Exoc8 (MGP_PahariEiJ_G0023313) #30	Sprtn (MGP_PahariEiJ_G0023314) #31	MGP_PahariEiJ_G0023315 #32	Tsnax (MGP_PahariEiJ_G0023316) #33	Disc1 (MGP_PahariEiJ_G0023317) #34	Sipa1l2 (MGP_PahariEiJ_G0023318) #35	Map10 (MGP_PahariEiJ_G0023319) #36	Ntpcr (MGP_PahariEiJ_G0023320) #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000160625 #7	ENSGT00390000018903 #8	ENSGT00390000009477 #9	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388.l #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000160625 #7	ENSGT00390000018903 #8	ENSGT00390000009477 #9	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388.l #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Mouse	MODERN SPECIES	17	Afg3l1 (ENSMUSG00000031967) #7	Dbndd1 (ENSMUSG00000031970) #8	Gas8 (ENSMUSG00000040220) #9	Rhou (ENSMUSG00000039960) #10	Rab4a (ENSMUSG00000019478) #11	Ccsap (ENSMUSG00000031971) #12	Acta1 (ENSMUSG00000031972) #13	Nup133 (ENSMUSG00000039509) #14	Abcb10 (ENSMUSG00000031974) #15	Taf5l (ENSMUSG00000038697) #16	Urb2 (ENSMUSG00000031976) #17	Galnt2 (ENSMUSG00000089704) #18	Pgbd5 (ENSMUSG00000050751) #19	Cog2 (ENSMUSG00000031979) #20	Agt (ENSMUSG00000031980) #21	Capn9 (ENSMUSG00000031981) #22	2310022B05Rik (ENSMUSG00000031983) #23	Ttc13 (ENSMUSG00000037300) #24	Arv1 (ENSMUSG00000031982) #25	Fam89a (ENSMUSG00000043068) #26	Trim67 (ENSMUSG00000036913) #27	2810004N23Rik (ENSMUSG00000031984) #28	Gnpat (ENSMUSG00000031985) #29	Exoc8 (ENSMUSG00000074030) #30	Sprtn (ENSMUSG00000031986) #31	Egln1 (ENSMUSG00000031987) #32	Tsnax (ENSMUSG00000056820) #33	Disc1 (ENSMUSG00000043051) #34	Sipa1l2 (ENSMUSG00000001995) #35	Map10 (ENSMUSG00000050930) #36	Ntpcr (ENSMUSG00000031851) #37
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000160625 #7	ENSGT00390000018903 #8	ENSGT00390000009477 #9	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388.l #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
spretus	MODERN SPECIES	17	Afg3l1 (MGP_SPRETEiJ_G0032810) #7	Dbndd1 (MGP_SPRETEiJ_G0032811) #8	Gas8 (MGP_SPRETEiJ_G0032812) #9	Rhou (MGP_SPRETEiJ_G0032813) #10	Rab4a (MGP_SPRETEiJ_G0032814) #11	Ccsap (MGP_SPRETEiJ_G0032815) #12	Acta1 (MGP_SPRETEiJ_G0032816) #13	Nup133 (MGP_SPRETEiJ_G0032817) #14	Abcb10 (MGP_SPRETEiJ_G0032818) #15	Taf5l (MGP_SPRETEiJ_G0032819) #16	Urb2 (MGP_SPRETEiJ_G0032820) #17	Galnt2 (MGP_SPRETEiJ_G0032821) #18	Pgbd5 (MGP_SPRETEiJ_G0032822) #19	Cog2 (MGP_SPRETEiJ_G0032823) #20	Agt (MGP_SPRETEiJ_G0032824) #21	Capn9 (MGP_SPRETEiJ_G0032825) #22	2310022B05Rik (MGP_SPRETEiJ_G0032826) #23	Ttc13 (MGP_SPRETEiJ_G0032827) #24	Arv1 (MGP_SPRETEiJ_G0032828) #25	Fam89a (MGP_SPRETEiJ_G0032829) #26	Trim67 (MGP_SPRETEiJ_G0032830) #27	2810004N23Rik (MGP_SPRETEiJ_G0032831) #28	Gnpat (MGP_SPRETEiJ_G0032832) #29	Exoc8 (MGP_SPRETEiJ_G0032833) #30	Sprtn (MGP_SPRETEiJ_G0032834) #31	Egln1 (MGP_SPRETEiJ_G0032835) #32	Tsnax (MGP_SPRETEiJ_G0032836) #33	Disc1 (MGP_SPRETEiJ_G0032837) #34	MGP_SPRETEiJ_G0032838 #35	Map10 (MGP_SPRETEiJ_G0032839) #36	Pcnx2 (MGP_SPRETEiJ_G0032840)
Steppe mouse	MODERN SPECIES	76				Rhou (ENSMSIG00000008966) #10	ENSMSIG00000008982	Rab4a (ENSMSIG00000008998) #11	Acta1 (ENSMSIG00000009031) #13	Nup133 (ENSMSIG00000009075) #14	ENSMSIG00000009168 #15	Urb2 (ENSMSIG00000009259) #17	ENSMSIG00000009325	Galnt2 (ENSMSIG00000009331) #18	Pgbd5 (ENSMSIG00000009372) #19	Cog2 (ENSMSIG00000009470) #20	Agt (ENSMSIG00000009544) #21	Capn9 (ENSMSIG00000009561) #22	2310022B05Rik (ENSMSIG00000009610) #23	ENSMSIG00000009617 #24	Arv1 (ENSMSIG00000011018) #25	Fam89a (ENSMSIG00000011035) #26
Ryukyu mouse	MODERN SPECIES	17	Afg3l1 (MGP_CAROLIEiJ_G0031692) #7	MGP_CAROLIEiJ_G0031693 #8	Gas8 (MGP_CAROLIEiJ_G0031694) #9	Rhou (MGP_CAROLIEiJ_G0031695) #10	Rab4a (MGP_CAROLIEiJ_G0031696) #11	Ccsap (MGP_CAROLIEiJ_G0031697) #12	Acta1 (MGP_CAROLIEiJ_G0031698) #13	Nup133 (MGP_CAROLIEiJ_G0031699) #14	Abcb10 (MGP_CAROLIEiJ_G0031700) #15	Taf5l (MGP_CAROLIEiJ_G0031701) #16	MGP_CAROLIEiJ_G0031702 #17	Galnt2 (MGP_CAROLIEiJ_G0031703) #18	Pgbd5 (MGP_CAROLIEiJ_G0031704) #19	Cog2 (MGP_CAROLIEiJ_G0031705) #20	Agt (MGP_CAROLIEiJ_G0031706) #21	Capn9 (MGP_CAROLIEiJ_G0031707) #22	2310022B05Rik (MGP_CAROLIEiJ_G0031708) #23	Ttc13 (MGP_CAROLIEiJ_G0031709) #24	Arv1 (MGP_CAROLIEiJ_G0031710) #25	Fam89a (MGP_CAROLIEiJ_G0031711) #26	Trim67 (MGP_CAROLIEiJ_G0031712) #27	2810004N23Rik (MGP_CAROLIEiJ_G0031713) #28	Gnpat (MGP_CAROLIEiJ_G0031714) #29	Exoc8 (MGP_CAROLIEiJ_G0031715) #30	MGP_CAROLIEiJ_G0031716 #31	Egln1 (MGP_CAROLIEiJ_G0031717) #32	Tsnax (MGP_CAROLIEiJ_G0031718) #33	Disc1 (MGP_CAROLIEiJ_G0031719) #34	Sipa1l2 (MGP_CAROLIEiJ_G0031720) #35	Map10 (MGP_CAROLIEiJ_G0031721) #36	Ntpcr (MGP_CAROLIEiJ_G0031722) #37
Rat	MODERN SPECIES	10	Dbndd1 (ENSRNOG00000026974) #8	Gas8 (ENSRNOG00000026964) #9	Rhou (ENSRNOG00000062578) #10	Rab4a (ENSRNOG00000017467) #11	Ccsap (ENSRNOG00000017690) #12	Acta1 (ENSRNOG00000017786) #13	Nup133 (ENSRNOG00000017919) #14	Abcb10 (ENSRNOG00000017993) #15	Taf5l (ENSRNOG00000018027) #16	Urb2 (ENSRNOG00000026853) #17	Cox6c-ps1 (ENSRNOG00000032602)	Galnt2 (ENSRNOG00000019143) #18	Pgbd5 (ENSRNOG00000026791) #19	Cog2 (ENSRNOG00000018228) #20	Agt (ENSRNOG00000018445) #21	Capn9 (ENSRNOG00000018480) #22	C19h1orf198 (ENSRNOG00000018836) #23	Ttc13 (ENSRNOG00000018884) #24	Arv1 (ENSRNOG00000018909) #25	Fam89a (ENSRNOG00000019022) #26	Trim67 (ENSRNOG00000019024) #27	C19h1orf131 (ENSRNOG00000019169) #28	Gnpat (ENSRNOG00000019205) #29	Exoc8 (ENSRNOG00000019766) #30	Sprtn (ENSRNOG00000021330) #31	Egln1 (ENSRNOG00000063609) #32	Tsnax (ENSRNOG00000049784) #33	Disc1 (ENSRNOG00000019779) #34	Sipa1l2 (ENSRNOG00000019791) #35	AABR07044111.1 (ENSRNOG00000038057)	Setsip (ENSRNOG00000062793)
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000160625 #7	ENSGT00390000018903 #8	ENSGT00390000009477 #9	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Cricetinae	ANCESTRAL SPECIES	26				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Golden Hamster	MODERN SPECIES	618				Rhou (ENSMAUG00000019591) #10	Rab4a (ENSMAUG00000019608) #11	Ccsap (ENSMAUG00000019947) #12	Acta1 (ENSMAUG00000020428) #13	Nup133 (ENSMAUG00000021171) #14	Abcb10 (ENSMAUG00000021327) #15	Taf5l (ENSMAUG00000001202) #16	Urb2 (ENSMAUG00000017980) #17	Galnt2 (ENSMAUG00000018737) #18	Pgbd5 (ENSMAUG00000019062) #19	ENSMAUG00000018065 #20	Agt (ENSMAUG00000018716) #21	Capn9 (ENSMAUG00000019552) #22	2310022B05Rik (ENSMAUG00000017969) #23	Ttc13 (ENSMAUG00000019020) #24	Arv1 (ENSMAUG00000019710) #25	Fam89a (ENSMAUG00000017441) #26	Trim67 (ENSMAUG00000018681) #27	2810004N23Rik (ENSMAUG00000018911) #28	Gnpat (ENSMAUG00000021271) #29	Sprtn (ENSMAUG00000021498) #31	ENSMAUG00000019756 #32	Tsnax (ENSMAUG00000019962) #33	Disc1 (ENSMAUG00000001315) #34	Sipa1l2 (ENSMAUG00000019999) #35	ENSMAUG00000020751	Ntpcr (ENSMAUG00000018566) #37	Pcnx2 (ENSMAUG00000019465)
Chinese hamster chok1gshd	MODERN SPECIES	285			Rhou (ENSCGRG00001009791) #10	Rab4a (ENSCGRG00001013159) #11	Ccsap (ENSCGRG00001014063) #12	ENSCGRG00001013414	Acta1 (ENSCGRG00001016859) #13	Nup133 (ENSCGRG00001017702) #14	Abcb10 (ENSCGRG00001011714) #15	ENSCGRG00001005313 #16	Urb2 (ENSCGRG00001009591) #17	Galnt2 (ENSCGRG00001010677) #18	Pgbd5 (ENSCGRG00001013649) #19	Cog2 (ENSCGRG00001017179) #20	Agt (ENSCGRG00001016172) #21	Capn9 (ENSCGRG00001019055) #22	ENSCGRG00001013431	2310022B05Rik (ENSCGRG00001017375) #23	Ttc13 (ENSCGRG00001008501) #24	Arv1 (ENSCGRG00001017960) #25	Fam89a (ENSCGRG00001018050) #26	Trim67 (ENSCGRG00001019880) #27	2810004N23Rik (ENSCGRG00001023052) #28	Gnpat (ENSCGRG00001023551) #29	Exoc8 (ENSCGRG00001015839) #30	Sprtn (ENSCGRG00001007490) #31	Egln1 (ENSCGRG00001009766) #32	Tsnax (ENSCGRG00001011132) #33	Disc1 (ENSCGRG00001022006) #34	ENSCGRG00001020276	ENSCGRG00001020535
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000160625 #7	ENSGT00390000018903 #8	ENSGT00390000009477 #9	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Northern American deer mouse	MODERN SPECIES	18	Def8 (ENSPEMG00000009051)	Afg3l1 (ENSPEMG00000008295) #7	Dbndd1 (ENSPEMG00000008061) #8	Gas8 (ENSPEMG00000011343) #9	Rhou (ENSPEMG00000028891) #10	Rab4a (ENSPEMG00000020117) #11	Ccsap (ENSPEMG00000019332) #12	Acta1 (ENSPEMG00000019882) #13	Nup133 (ENSPEMG00000019629) #14	Abcb10 (ENSPEMG00000019961) #15	Taf5l (ENSPEMG00000019399) #16	Urb2 (ENSPEMG00000019551) #17	Pgbd5 (ENSPEMG00000019666) #19	Cog2 (ENSPEMG00000029277) #20	Agt (ENSPEMG00000012794) #21	Capn9 (ENSPEMG00000013559) #22	2310022B05Rik (ENSPEMG00000015009) #23	Ttc13 (ENSPEMG00000009919) #24	Arv1 (ENSPEMG00000014141) #25	Fam89a (ENSPEMG00000004221) #26	Trim67 (ENSPEMG00000008369) #27	2810004N23Rik (ENSPEMG00000015630) #28	ENSPEMG00000017290	Gnpat (ENSPEMG00000007411) #29	Exoc8 (ENSPEMG00000007121) #30	Sprtn (ENSPEMG00000013722) #31	Egln1 (ENSPEMG00000003824) #32	Tsnax (ENSPEMG00000028815) #33	Disc1 (ENSPEMG00000016648) #34	Sipa1l2 (ENSPEMG00000010643) #35	Map10 (ENSPEMG00000027554) #36
Prairie vole	MODERN SPECIES	12	Afg3l1 (ENSMOCG00000010300) #7	Dbndd1 (ENSMOCG00000018782) #8	Gas8 (ENSMOCG00000022459) #9	ENSMOCG00000017516	Rhou (ENSMOCG00000019454) #10	Rab4a (ENSMOCG00000005922) #11	ENSMOCG00000012886 #12	Acta1 (ENSMOCG00000019079) #13	Nup133 (ENSMOCG00000022065) #14	Abcb10 (ENSMOCG00000014858) #15	ENSMOCG00000016780 #16	Urb2 (ENSMOCG00000020369) #17	Pgbd5 (ENSMOCG00000014688) #19	ENSMOCG00000017129 #20	Agt (ENSMOCG00000021476) #21	Capn9 (ENSMOCG00000003962) #22	2310022B05Rik (ENSMOCG00000022823) #23	Ttc13 (ENSMOCG00000020089) #24	Arv1 (ENSMOCG00000016677) #25	Fam89a (ENSMOCG00000016880) #26	Trim67 (ENSMOCG00000015220) #27	2810004N23Rik (ENSMOCG00000017538) #28	Gnpat (ENSMOCG00000014406) #29	Exoc8 (ENSMOCG00000003153) #30	Sprtn (ENSMOCG00000004695) #31	ENSMOCG00000018917 #32	Tsnax (ENSMOCG00000007651) #33	Disc1 (ENSMOCG00000018986) #34	Sipa1l2 (ENSMOCG00000012417) #35	Ntpcr (ENSMOCG00000022775) #37	Pcnx2 (ENSMOCG00000006218)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1303	Rhou (ENSNGAG00000010199) #10	ENSNGAG00000013788	Rab4a (ENSNGAG00000020318) #11	Ccsap (ENSNGAG00000020516) #12	Acta1 (ENSNGAG00000008844) #13	Nup133 (ENSNGAG00000011857) #14	ENSNGAG00000016124	Abcb10 (ENSNGAG00000005450) #15	Taf5l (ENSNGAG00000013058) #16	Urb2 (ENSNGAG00000016524) #17	ENSNGAG00000000097	Galnt2 (ENSNGAG00000017214) #18	Pgbd5 (ENSNGAG00000016041) #19	ENSNGAG00000013046 #20	Agt (ENSNGAG00000014491) #21	Capn9 (ENSNGAG00000017031) #22	2310022B05Rik (ENSNGAG00000012261) #23	Ttc13 (ENSNGAG00000013995) #24	Arv1 (ENSNGAG00000007653) #25	Fam89a (ENSNGAG00000015567) #26	Trim67 (ENSNGAG00000000094) #27	2810004N23Rik (ENSNGAG00000001222) #28	Gnpat (ENSNGAG00000006292) #29	Exoc8 (ENSNGAG00000013787) #30	Sprtn (ENSNGAG00000018906) #31	ENSNGAG00000008864 #32	Tsnax (ENSNGAG00000014498) #33	Disc1 (ENSNGAG00000000915) #34	Sipa1l2 (ENSNGAG00000016879) #35	Map10 (ENSNGAG00000019072) #36	Ntpcr (ENSNGAG00000020788) #37
Lesser Egyptian jerboa	MODERN SPECIES	72				Rhou (ENSJJAG00000011490) #10	ENSJJAG00000012898	Rab4a (ENSJJAG00000020147) #11	Acta1 (ENSJJAG00000019369) #13	Nup133 (ENSJJAG00000024077) #14	Abcb10 (ENSJJAG00000015506) #15	Taf5l (ENSJJAG00000018416) #16	Urb2 (ENSJJAG00000011998) #17	Galnt2 (ENSJJAG00000024030) #18	Pgbd5 (ENSJJAG00000000152) #19	ENSJJAG00000016053 #20	Agt (ENSJJAG00000018520) #21	Capn9 (ENSJJAG00000018754) #22	2310022B05Rik (ENSJJAG00000014429) #23	Ttc13 (ENSJJAG00000023452) #24	Arv1 (ENSJJAG00000000539) #25	ENSJJAG00000015205 #26	Trim67 (ENSJJAG00000016605) #27	2810004N23Rik (ENSJJAG00000013512) #28	Gnpat (ENSJJAG00000014883) #29	Sprtn (ENSJJAG00000022876) #31	ENSJJAG00000022492 #32	ENSJJAG00000000228 #33	ENSJJAG00000007822 #34	Sipa1l2 (ENSJJAG00000006772) #35	ENSJJAG00000012997 #36	Ntpcr (ENSJJAG00000021780) #37	Pcnx2 (ENSJJAG00000018916)
Kangaroo rat	MODERN SPECIES	343	Mpp7 (ENSDORG00000013909)	ENSDORG00000023262	Wac (ENSDORG00000028968)	Rhou (ENSDORG00000024172) #10	Rab4a (ENSDORG00000012574) #11	Ccsap (ENSDORG00000012576) #12	ENSDORG00000026422	Nup133 (ENSDORG00000006099) #14	Abcb10 (ENSDORG00000000788) #15	Taf5l (ENSDORG00000000827) #16	Urb2 (ENSDORG00000014975) #17	Galnt2 (ENSDORG00000025815) #18	Pgbd5 (ENSDORG00000005999) #19	Cog2 (ENSDORG00000011296) #20	Agt (ENSDORG00000011297) #21	Capn9 (ENSDORG00000003683) #22	ENSDORG00000005506 #24	Arv1 (ENSDORG00000001380) #25	2810004N23Rik (ENSDORG00000001922) #28	Gnpat (ENSDORG00000023736) #29	Exoc8 (ENSDORG00000026626) #30	ENSDORG00000006651 #32	Tsnax (ENSDORG00000013537) #33	Sipa1l2 (ENSDORG00000001369) #35	Ntpcr (ENSDORG00000014863) #37	Pcnx2 (ENSDORG00000014864)	Kcnk1 (ENSDORG00000023268)	Slc35f3 (ENSDORG00000007982)	Coa6 (ENSDORG00000025191)	Tarbp1 (ENSDORG00000007984)	ENSDORG00000026942
Rodentia_A	ANCESTRAL SPECIES	25				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Hystricomorpha	ANCESTRAL SPECIES	52			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.r.b.b #16	ENSGT00940000153342.b.r.b.a.a #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A.f #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Hystricomorpha_a	ANCESTRAL SPECIES	45			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.r.b.b #16	ENSGT00940000153342.b.r.b.a.a #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A.f #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000018683 #37	ENSGT00940000157374
Hystricomorpha_b	ANCESTRAL SPECIES	42			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.r.b.b #16	ENSGT00940000153342.b.r.b.a.a #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A.f #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000018683 #37	ENSGT00940000157374
Long-tailed chinchilla	MODERN SPECIES	199			RHOU (ENSCLAG00000003477) #10	RAB4A (ENSCLAG00000003386) #11	ENSCLAG00000003336 #12	ACTA1 (ENSCLAG00000003307) #13	NUP133 (ENSCLAG00000003189) #14	ABCB10 (ENSCLAG00000003110) #15	TAF5L (ENSCLAG00000006348) #16	URB2 (ENSCLAG00000006268) #17	ENSCLAG00000017730	GALNT2 (ENSCLAG00000006148) #18	PGBD5 (ENSCLAG00000006064) #19	COG2 (ENSCLAG00000005818) #20	AGT (ENSCLAG00000005758) #21	CAPN9 (ENSCLAG00000005597) #22	ENSCLAG00000005568	TTC13 (ENSCLAG00000005427) #24	ARV1 (ENSCLAG00000005346) #25	FAM89A (ENSCLAG00000005314) #26	TRIM67 (ENSCLAG00000005249) #27	C1orf131 (ENSCLAG00000005201) #28	GNPAT (ENSCLAG00000005106) #29	EXOC8 (ENSCLAG00000017614) #30	SPRTN (ENSCLAG00000005040) #31	EGLN1 (ENSCLAG00000005012) #32	TSNAX (ENSCLAG00000004894) #33	DISC1 (ENSCLAG00000004662) #34	SIPA1L2 (ENSCLAG00000004244) #35	NTPCR (ENSCLAG00000004088) #37	PCNX2 (ENSCLAG00000003984)
Degu	MODERN SPECIES	168	ACTA1 (ENSODEG00000007499) #13	NUP133 (ENSODEG00000007703) #14	ABCB10 (ENSODEG00000004723) #15	ENSODEG00000005015	TAF5L (ENSODEG00000005431) #16	URB2 (ENSODEG00000005593) #17	ENSODEG00000005978	ENSODEG00000019162	ENSODEG00000005199	ENSODEG00000004795	GALNT2 (ENSODEG00000005632) #18	ENSODEG00000019102	PGBD5 (ENSODEG00000005019) #19	ENSODEG00000005060 #20	AGT (ENSODEG00000004670) #21	CAPN9 (ENSODEG00000004920) #22	C1orf198 (ENSODEG00000004510) #23	TTC13 (ENSODEG00000004797) #24	ARV1 (ENSODEG00000006367) #25	FAM89A (ENSODEG00000005427) #26	TRIM67 (ENSODEG00000005770) #27	C1orf131 (ENSODEG00000005944) #28	GNPAT (ENSODEG00000004666) #29	EXOC8 (ENSODEG00000019188) #30	SPRTN (ENSODEG00000005433) #31	ENSODEG00000005830 #32	ENSODEG00000005475 #33	SIPA1L2 (ENSODEG00000005861) #35	NTPCR (ENSODEG00000004704) #37	PCNX2 (ENSODEG00000004978)	MAP3K21 (ENSODEG00000006318)
Guinea pig	MODERN SPECIES	16				RHOU (ENSCPOG00000025143) #10	RAB4A (ENSCPOG00000034846) #11	CCSAP (ENSCPOG00000022514) #12	ACTA1 (ENSCPOG00000032187) #13	NUP133 (ENSCPOG00000010389) #14	ABCB10 (ENSCPOG00000010398) #15	TAF5L (ENSCPOG00000006299) #16	ENSCPOG00000020777 #17	GALNT2 (ENSCPOG00000003623) #18	PGBD5 (ENSCPOG00000010542) #19	COG2 (ENSCPOG00000013400) #20	AGT (ENSCPOG00000023212) #21	CAPN9 (ENSCPOG00000011780) #22	C1orf198 (ENSCPOG00000012200) #23	TTC13 (ENSCPOG00000002678) #24	ARV1 (ENSCPOG00000002681) #25	FAM89A (ENSCPOG00000030221) #26	TRIM67 (ENSCPOG00000012219) #27	C1orf131 (ENSCPOG00000033025) #28	GNPAT (ENSCPOG00000012228) #29	EXOC8 (ENSCPOG00000015656) #30	SPRTN (ENSCPOG00000015655) #31	ENSCPOG00000024067 #32	TSNAX (ENSCPOG00000036257) #33	DISC1 (ENSCPOG00000013230) #34	SIPA1L2 (ENSCPOG00000000466) #35	NTPCR (ENSCPOG00000008589) #37	PCNX2 (ENSCPOG00000008593)
Naked mole-rat female	MODERN SPECIES	28	ENSHGLG00000016381	ENSHGLG00000040291 #10	RAB4A (ENSHGLG00000009760) #11	CCSAP (ENSHGLG00000033548) #12	ACTA1 (ENSHGLG00000006223) #13	NUP133 (ENSHGLG00000005460) #14	ABCB10 (ENSHGLG00000016571) #15	ENSHGLG00000016205 #16	URB2 (ENSHGLG00000016561) #17	ENSHGLG00000048607	GALNT2 (ENSHGLG00000015311) #18	ENSHGLG00000044691	PGBD5 (ENSHGLG00000017120) #19	COG2 (ENSHGLG00000017776) #20	AGT (ENSHGLG00000017789) #21	CAPN9 (ENSHGLG00000013179) #22	C1orf198 (ENSHGLG00000032119) #23	TTC13 (ENSHGLG00000016230) #24	ENSHGLG00000044008	ARV1 (ENSHGLG00000015999) #25	FAM89A (ENSHGLG00000041625) #26	ENSHGLG00000039312	ENSHGLG00000040384	TRIM67 (ENSHGLG00000008936) #27	ENSHGLG00000048706 #28	GNPAT (ENSHGLG00000006233) #29	EXOC8 (ENSHGLG00000034428) #30	ENSHGLG00000011554 #31	ENSHGLG00000009973 #32	ENSHGLG00000021285	TSNAX (ENSHGLG00000037072) #33
Sciuridae	ANCESTRAL SPECIES					ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Marmotini	ANCESTRAL SPECIES	55				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Marmotini_b	ANCESTRAL SPECIES	15				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000018683 #37	ENSGT00940000157374
Squirrel	MODERN SPECIES	84				RHOU (ENSSTOG00000028927) #10	RAB4A (ENSSTOG00000020348) #11	ENSSTOG00000030886 #12	ACTA1 (ENSSTOG00000024222) #13	NUP133 (ENSSTOG00000009316) #14	ABCB10 (ENSSTOG00000019514) #15	TAF5L (ENSSTOG00000022729) #16	URB2 (ENSSTOG00000025323) #17	GALNT2 (ENSSTOG00000026066) #18	PGBD5 (ENSSTOG00000021321) #19	COG2 (ENSSTOG00000015463) #20	AGT (ENSSTOG00000029164) #21	CAPN9 (ENSSTOG00000003422) #22	C1orf198 (ENSSTOG00000020200) #23	TTC13 (ENSSTOG00000004175) #24	ARV1 (ENSSTOG00000004210) #25	TRIM67 (ENSSTOG00000005723) #27	C1orf131 (ENSSTOG00000008093) #28	GNPAT (ENSSTOG00000005751) #29	EXOC8 (ENSSTOG00000020370) #30	SPRTN (ENSSTOG00000007850) #31	ENSSTOG00000023570 #32	TSNAX (ENSSTOG00000024989) #33	ENSSTOG00000023596 #34	SIPA1L2 (ENSSTOG00000021559) #35	NTPCR (ENSSTOG00000028538) #37	PCNX2 (ENSSTOG00000016530)	MAP3K21 (ENSSTOG00000027529)
Arctic ground squirrel	MODERN SPECIES	17			RHOU (ENSUPAG00010000409) #10	ENSUPAG00010000405	RAB4A (ENSUPAG00010000362) #11	CCSAP (ENSUPAG00010000330) #12	ACTA1 (ENSUPAG00010000311) #13	NUP133 (ENSUPAG00010000229) #14	ABCB10 (ENSUPAG00010000194) #15	TAF5L (ENSUPAG00010000168) #16	URB2 (ENSUPAG00010000145) #17	GALNT2 (ENSUPAG00010000112) #18	PGBD5 (ENSUPAG00010000058) #19	COG2 (ENSUPAG00010000010) #20	AGT (ENSUPAG00010021699) #21	CAPN9 (ENSUPAG00010021695) #22	C1orf198 (ENSUPAG00010021688) #23	TTC13 (ENSUPAG00010021659) #24	ARV1 (ENSUPAG00010021650) #25	FAM89A (ENSUPAG00010021649) #26	TRIM67 (ENSUPAG00010021637) #27	C1orf131 (ENSUPAG00010021636) #28	GNPAT (ENSUPAG00010021626) #29	EXOC8 (ENSUPAG00010021624) #30	SPRTN (ENSUPAG00010021620) #31	EGLN1 (ENSUPAG00010021616) #32	ENSUPAG00010021608	TSNAX (ENSUPAG00010021601) #33	DISC1 (ENSUPAG00010021561) #34	SIPA1L2 (ENSUPAG00010021526) #35	NTPCR (ENSUPAG00010021487) #37
Alpin marmot	MODERN SPECIES	91				ENSMMMG00000011482	RAB4A (ENSMMMG00000011486) #11	ENSMMMG00000011495 #12	ENSMMMG00000011499	NUP133 (ENSMMMG00000011523) #14	ABCB10 (ENSMMMG00000011537) #15	TAF5L (ENSMMMG00000011566) #16	URB2 (ENSMMMG00000011588) #17	GALNT2 (ENSMMMG00000011605) #18	PGBD5 (ENSMMMG00000011616) #19	COG2 (ENSMMMG00000011637) #20	AGT (ENSMMMG00000012190) #21	CAPN9 (ENSMMMG00000012201) #22	TTC13 (ENSMMMG00000012240) #24	ARV1 (ENSMMMG00000012493) #25	TRIM67 (ENSMMMG00000012508) #27	C1orf131 (ENSMMMG00000012531) #28	GNPAT (ENSMMMG00000012545) #29	EXOC8 (ENSMMMG00000012553) #30	SPRTN (ENSMMMG00000012556) #31	ENSMMMG00000012567 #32	ENSMMMG00000012575	DISC1 (ENSMMMG00000012596) #34	SIPA1L2 (ENSMMMG00000015639) #35	ENSMMMG00000015756 #36	NTPCR (ENSMMMG00000015759) #37	PCNX2 (ENSMMMG00000015768)	MAP3K21 (ENSMMMG00000015822)
Eurasian red squirrel	MODERN SPECIES	3			RHOU (ENSSVLG00005008202) #10	RAB4A (ENSSVLG00005008255) #11	ENSSVLG00005008314 #12	ACTA1 (ENSSVLG00005008349) #13	NUP133 (ENSSVLG00005008440) #14	ENSSVLG00005008553	ENSSVLG00005008581 #15	TAF5L (ENSSVLG00005008596) #16	ENSSVLG00005008642 #17	GALNT2 (ENSSVLG00005008743) #18	PGBD5 (ENSSVLG00005008768) #19	COG2 (ENSSVLG00005008812) #20	AGT (ENSSVLG00005008894) #21	CAPN9 (ENSSVLG00005009043) #22	C1orf198 (ENSSVLG00005009390) #23	TTC13 (ENSSVLG00005009587) #24	ARV1 (ENSSVLG00005010188) #25	FAM89A (ENSSVLG00005010246) #26	TRIM67 (ENSSVLG00005010281) #27	C1orf131 (ENSSVLG00005010461) #28	GNPAT (ENSSVLG00005010532) #29	EXOC8 (ENSSVLG00005010655) #30	SPRTN (ENSSVLG00005010684) #31	EGLN1 (ENSSVLG00005010770) #32	TSNAX (ENSSVLG00005010917) #33	ENSSVLG00005010987 #34	SIPA1L2 (ENSSVLG00005011103) #35	ENSSVLG00005011585	ENSSVLG00005011681
Lagomorpha	ANCESTRAL SPECIES	102										ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37	ENSGT00940000157374
Rabbit	MODERN SPECIES	7	SKIDA1 (ENSOCUG00000027908)	MLLT10 (ENSOCUG00000006040)	ENSOCUG00000032979	DNAJC1 (ENSOCUG00000022926)	COMMD3 (ENSOCUG00000010259)	BMI1 (ENSOCUG00000005420)	SPAG6 (ENSOCUG00000017094)	PIP4K2A (ENSOCUG00000017112)	TAF5L (ENSOCUG00000010697) #16	URB2 (ENSOCUG00000010700) #17	ENSOCUG00000039265	GALNT2 (ENSOCUG00000015958) #18	PGBD5 (ENSOCUG00000006839) #19	COG2 (ENSOCUG00000000472) #20	AGT (ENSOCUG00000000478) #21	CAPN9 (ENSOCUG00000000483) #22	C1orf198 (ENSOCUG00000026967) #23	TTC13 (ENSOCUG00000000489) #24	ARV1 (ENSOCUG00000000494) #25	ENSOCUG00000023617 #26	TRIM67 (ENSOCUG00000005645) #27	ENSOCUG00000005657 #28	GNPAT (ENSOCUG00000005664) #29	SPRTN (ENSOCUG00000013211) #31	EGLN1 (ENSOCUG00000013221) #32	TSNAX (ENSOCUG00000029456) #33	ENSOCUG00000037997	DISC1 (ENSOCUG00000010284) #34	SIPA1L2 (ENSOCUG00000010297) #35	MAP10 (ENSOCUG00000025609) #36	NTPCR (ENSOCUG00000014357) #37
Pika	MODERN SPECIES	4793														ENSOPRG00000016519 #20	ENSOPRG00000016544 #21	CAPN9 (ENSOPRG00000016563) #22	ENSOPRG00000016577 #23
Tree shrew	MODERN SPECIES	1639															COG2 (ENSTBEG00000017731) #20	CAPN9 (ENSTBEG00000009706) #22
Primates	ANCESTRAL SPECIES	7			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Haplorrhini	ANCESTRAL SPECIES	41			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Simiiformes	ANCESTRAL SPECIES	31		ENSGT00940000156644 #10	ENSGT00910000146652	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Catarrhini	ANCESTRAL SPECIES	27	ENSGT00940000156644 #10	ENSGT00910000146652	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00910000146864	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00860000134306	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT01100000263493.a.b.a.a.a.b.a.a.a
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00940000156644 #10	ENSGT00910000146652	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00910000146864	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00860000134306	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00910000148457	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34
Hominidae	ANCESTRAL SPECIES	6	ENSGT00390000009510	ENSGT00940000163997	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00910000146864	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00910000148457	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT01100000263493.a.b.a.a.a.b.a.a.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00390000009510	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00390000000537.e	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00910000146864	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT01100000263493.a.b.a.a.a.b.a.a.a	ENSGT00940000157388 #35
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00390000009510	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00390000000537.e	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Pan	ANCESTRAL SPECIES		ENSGT00390000009510	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00390000000537.e	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Bonobo	MODERN SPECIES		H2BC26 (ENSPPAG00000025721)	ENSPPAG00000001893	ENSPPAG00000034335 #10	RAB4A (ENSPPAG00000036595) #11	ACTA1 (ENSPPAG00000033916) #13	NUP133 (ENSPPAG00000035148) #14	ENSPPAG00000025609	ABCB10 (ENSPPAG00000012448) #15	TAF5L (ENSPPAG00000034307) #16	URB2 (ENSPPAG00000040629) #17	ENSPPAG00000004114	GALNT2 (ENSPPAG00000036428) #18	PGBD5 (ENSPPAG00000028509) #19	COG2 (ENSPPAG00000041497) #20	AGT (ENSPPAG00000027230) #21	CAPN9 (ENSPPAG00000039081) #22	C1orf198 (ENSPPAG00000035229) #23	TTC13 (ENSPPAG00000027317) #24	ARV1 (ENSPPAG00000043439) #25	ENSPPAG00000028936	ENSPPAG00000034146	ENSPPAG00000038369	C1orf131 (ENSPPAG00000043150) #28	GNPAT (ENSPPAG00000042934) #29	EXOC8 (ENSPPAG00000008151) #30	SPRTN (ENSPPAG00000036767) #31	ENSPPAG00000030076 #32	TSNAX (ENSPPAG00000030431) #33	DISC1 (ENSPPAG00000031414) #34	SIPA1L2 (ENSPPAG00000039392) #35	MAP10 (ENSPPAG00000022583) #36
Chimpanzee	MODERN SPECIES		H2BC27 (ENSPTRG00000049906)	RNF187 (ENSPTRG00000002079)	RHOU (ENSPTRG00000045909) #10	RAB4A (ENSPTRG00000002083) #11	CCSAP (ENSPTRG00000002085) #12	ACTA1 (ENSPTRG00000002086) #13	NUP133 (ENSPTRG00000002088) #14	ABCB10 (ENSPTRG00000002090) #15	TAF5L (ENSPTRG00000002091) #16	URB2 (ENSPTRG00000002092) #17	ENSPTRG00000047372	GALNT2 (ENSPTRG00000002093) #18	PGBD5 (ENSPTRG00000002094) #19	COG2 (ENSPTRG00000002095) #20	AGT (ENSPTRG00000002096) #21	CAPN9 (ENSPTRG00000002097) #22	C1H1orf198 (ENSPTRG00000002099) #23	TTC13 (ENSPTRG00000002101) #24	ARV1 (ENSPTRG00000002102) #25	FAM89A (ENSPTRG00000002103) #26	ENSPTRG00000039222	TRIM67 (ENSPTRG00000002104) #27	ENSPTRG00000049171	C1H1orf131 (ENSPTRG00000002106) #28	GNPAT (ENSPTRG00000002107) #29	EXOC8 (ENSPTRG00000002108) #30	SPRTN (ENSPTRG00000002109) #31	EGLN1 (ENSPTRG00000002110) #32	TSNAX (ENSPTRG00000002111) #33	DISC1 (ENSPTRG00000002112) #34	SIPA1L2 (ENSPTRG00000002114) #35
Human	MODERN SPECIES		H2AC25 (ENSG00000181218)	H2BC26 (ENSG00000196890)	RNF187 (ENSG00000168159)	RHOU (ENSG00000116574) #10	RAB4A (ENSG00000168118) #11	CCSAP (ENSG00000154429) #12	ACTA1 (ENSG00000143632) #13	NUP133 (ENSG00000069248) #14	ABCB10 (ENSG00000135776) #15	TAF5L (ENSG00000135801) #16	URB2 (ENSG00000135763) #17	GALNT2 (ENSG00000143641) #18	PGBD5 (ENSG00000177614) #19	COG2 (ENSG00000135775) #20	AGT (ENSG00000135744) #21	CAPN9 (ENSG00000135773) #22	C1orf198 (ENSG00000119280) #23	TTC13 (ENSG00000143643) #24	ARV1 (ENSG00000173409) #25	FAM89A (ENSG00000182118) #26	TRIM67 (ENSG00000119283) #27	C1orf131 (ENSG00000143633) #28	GNPAT (ENSG00000116906) #29	EXOC8 (ENSG00000116903) #30	SPRTN (ENSG00000010072) #31	EGLN1 (ENSG00000135766) #32	ENSG00000287856	TSNAX (ENSG00000116918) #33	DISC1 (ENSG00000162946) #34	SIPA1L2 (ENSG00000116991) #35	MAP10 (ENSG00000212916) #36
Gorilla	MODERN SPECIES		ENSGGOG00000040773	RAB4A (ENSGGOG00000015714) #11	CCSAP (ENSGGOG00000014931) #12	ACTA1 (ENSGGOG00000011599) #13	NUP133 (ENSGGOG00000000930) #14	ABCB10 (ENSGGOG00000008699) #15	TAF5L (ENSGGOG00000028544) #16	URB2 (ENSGGOG00000025643) #17	ENSGGOG00000005499	GALNT2 (ENSGGOG00000000550) #18	PGBD5 (ENSGGOG00000005004) #19	ENSGGOG00000037476	ENSGGOG00000042451	COG2 (ENSGGOG00000010454) #20	AGT (ENSGGOG00000000197) #21	CAPN9 (ENSGGOG00000012858) #22	C1orf198 (ENSGGOG00000006567) #23	TTC13 (ENSGGOG00000000163) #24	ARV1 (ENSGGOG00000028598) #25	ENSGGOG00000022499 #26	TRIM67 (ENSGGOG00000003439) #27	ENSGGOG00000043972	C1orf131 (ENSGGOG00000003443) #28	GNPAT (ENSGGOG00000016562) #29	EXOC8 (ENSGGOG00000026842) #30	SPRTN (ENSGGOG00000003142) #31	EGLN1 (ENSGGOG00000024267) #32	TSNAX (ENSGGOG00000039786) #33	DISC1 (ENSGGOG00000014086) #34	ENSGGOG00000039424	SIPA1L2 (ENSGGOG00000000793) #35
Orangutan	MODERN SPECIES		ENSPPYG00000000133	ENSPPYG00000000131	RHOU (ENSPPYG00000000130) #10	RAB4A (ENSPPYG00000000128) #11	CCSAP (ENSPPYG00000039997) #12	ACTA1 (ENSPPYG00000000127) #13	NUP133 (ENSPPYG00000000126) #14	ABCB10 (ENSPPYG00000000125) #15	ENSPPYG00000032422	TAF5L (ENSPPYG00000000124) #16	URB2 (ENSPPYG00000000123) #17	GALNT2 (ENSPPYG00000033917) #18	PGBD5 (ENSPPYG00000039158) #19	COG2 (ENSPPYG00000000121) #20	AGT (ENSPPYG00000000120) #21	CAPN9 (ENSPPYG00000000119) #22	C1orf198 (ENSPPYG00000000118) #23	TTC13 (ENSPPYG00000000117) #24	ARV1 (ENSPPYG00000000116) #25	FAM89A (ENSPPYG00000000115) #26	ENSPPYG00000032788	TRIM67 (ENSPPYG00000010668) #27	C1orf131 (ENSPPYG00000036159) #28	GNPAT (ENSPPYG00000010620) #29	SPRTN (ENSPPYG00000036706) #31	EGLN1 (ENSPPYG00000000114) #32	ENSPPYG00000000113	TSNAX (ENSPPYG00000000112) #33	DISC1 (ENSPPYG00000000111) #34	SIPA1L2 (ENSPPYG00000000110) #35	MAP10 (ENSPPYG00000000109) #36
Gibbon	MODERN SPECIES	20	ENSNLEG00000029943	RHOU (ENSNLEG00000027920) #10	ENSNLEG00000027599	RAB4A (ENSNLEG00000014339) #11	ENSNLEG00000032941	ENSNLEG00000014345 #12	ACTA1 (ENSNLEG00000014347) #13	NUP133 (ENSNLEG00000014372) #14	ABCB10 (ENSNLEG00000014442) #15	TAF5L (ENSNLEG00000014446) #16	URB2 (ENSNLEG00000014450) #17	GALNT2 (ENSNLEG00000014277) #18	ENSNLEG00000001544 #19	COG2 (ENSNLEG00000001549) #20	AGT (ENSNLEG00000001707) #21	CAPN9 (ENSNLEG00000001757) #22	C1orf198 (ENSNLEG00000032246) #23	ENSNLEG00000026858	ARV1 (ENSNLEG00000001810) #25	ENSNLEG00000031978	FAM89A (ENSNLEG00000001853) #26	ENSNLEG00000032200	ENSNLEG00000032423	TRIM67 (ENSNLEG00000001870) #27	ENSNLEG00000035568	C1orf131 (ENSNLEG00000001871) #28	GNPAT (ENSNLEG00000001914) #29	EXOC8 (ENSNLEG00000018836) #30	ENSNLEG00000028903	SPRTN (ENSNLEG00000002094) #31	EGLN1 (ENSNLEG00000002120) #32
Cercopithecidae	ANCESTRAL SPECIES	33	ENSGT00940000156644 #10	ENSGT00390000016262.i	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00910000146864	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00860000134306.b	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT01100000263493.a.b.a.a.a.b.a.a.a
Cercopithecinae	ANCESTRAL SPECIES	18	ENSGT00940000156644 #10	ENSGT00390000016262.i	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT01100000263493.a.b.a.a.a.b.a.a.a	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000014067	ENSGT00940000156644 #10	ENSGT00390000016262.i	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00910000147355	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT01100000263493.a.b.a.a.a.b.a.a.a.b	ENSGT00940000157388 #35
Macaca	ANCESTRAL SPECIES		ENSGT00940000159036	ENSGT00390000014067	ENSGT00940000156644 #10	ENSGT00390000016262.i	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00910000147355	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT01100000263493.a.b.a.a.a.b.a.a.a.b	ENSGT00940000157388 #35
Pig-tailed macaque	MODERN SPECIES	280			RHOU (ENSMNEG00000042624) #10	ENSMNEG00000029613	RAB4A (ENSMNEG00000044979) #11	CCSAP (ENSMNEG00000043794) #12	ACTA1 (ENSMNEG00000003684) #13	NUP133 (ENSMNEG00000035929) #14	ABCB10 (ENSMNEG00000028913) #15	TAF5L (ENSMNEG00000040677) #16	URB2 (ENSMNEG00000038762) #17	GALNT2 (ENSMNEG00000034110) #18	PGBD5 (ENSMNEG00000031235) #19	COG2 (ENSMNEG00000028338) #20	AGT (ENSMNEG00000030630) #21	CAPN9 (ENSMNEG00000045133) #22	C1orf198 (ENSMNEG00000037953) #23	TTC13 (ENSMNEG00000032648) #24	ARV1 (ENSMNEG00000034898) #25	FAM89A (ENSMNEG00000036893) #26	ENSMNEG00000028226	TRIM67 (ENSMNEG00000017640) #27	ENSMNEG00000039005	C1orf131 (ENSMNEG00000038708) #28	ENSMNEG00000043265	GNPAT (ENSMNEG00000035709) #29	EXOC8 (ENSMNEG00000037919) #30	SPRTN (ENSMNEG00000029733) #31	EGLN1 (ENSMNEG00000040904) #32	TSNAX (ENSMNEG00000038898) #33	DISC1 (ENSMNEG00000034015) #34
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000159036	ENSGT00390000014067	ENSGT00940000156644 #10	ENSGT00390000016262.i	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000163244.d.b.b.b.b.a	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT01100000263493.a.b.a.a.a.b.a.a.a.b	ENSGT00940000157388 #35
Crab-eating macaque	MODERN SPECIES		RGS4 (ENSMFAG00000048267)	CCDC190 (ENSMFAG00000002602)	RHOU (ENSMFAG00000061700) #10	RAB4A (ENSMFAG00000038822) #11	ENSMFAG00000053231	CCSAP (ENSMFAG00000033596) #12	ACTA1 (ENSMFAG00000002280) #13	NUP133 (ENSMFAG00000044341) #14	ABCB10 (ENSMFAG00000002787) #15	TAF5L (ENSMFAG00000037566) #16	URB2 (ENSMFAG00000039905) #17	GALNT2 (ENSMFAG00000043385) #18	PGBD5 (ENSMFAG00000001236) #19	COG2 (ENSMFAG00000036591) #20	AGT (ENSMFAG00000008235) #21	CAPN9 (ENSMFAG00000042957) #22	C1orf198 (ENSMFAG00000039985) #23	TTC13 (ENSMFAG00000038133) #24	ARV1 (ENSMFAG00000030703) #25	FAM89A (ENSMFAG00000039366) #26	TRIM67 (ENSMFAG00000035817) #27	C1orf131 (ENSMFAG00000004049) #28	GNPAT (ENSMFAG00000033412) #29	ENSMFAG00000053318	EXOC8 (ENSMFAG00000039846) #30	SPRTN (ENSMFAG00000002589) #31	ENSMFAG00000053873	EGLN1 (ENSMFAG00000039962) #32	DISC1 (ENSMFAG00000042435) #34	ENSMFAG00000058767	SIPA1L2 (ENSMFAG00000039676) #35
Rhesus	MODERN SPECIES		RHOU (ENSMMUG00000057995) #10	ENSMMUG00000031107	RAB4A (ENSMMUG00000017720) #11	CCSAP (ENSMMUG00000017722) #12	ENSMMUG00000055996	ACTA1 (ENSMMUG00000022086) #13	ENSMMUG00000054977	NUP133 (ENSMMUG00000022091) #14	ABCB10 (ENSMMUG00000022094) #15	TAF5L (ENSMMUG00000009508) #16	URB2 (ENSMMUG00000009509) #17	GALNT2 (ENSMMUG00000002285) #18	PGBD5 (ENSMMUG00000002287) #19	COG2 (ENSMMUG00000005877) #20	AGT (ENSMMUG00000005881) #21	CAPN9 (ENSMMUG00000005882) #22	C1H1orf198 (ENSMMUG00000005886) #23	TTC13 (ENSMMUG00000005888) #24	ARV1 (ENSMMUG00000005892) #25	FAM89A (ENSMMUG00000008191) #26	TRIM67 (ENSMMUG00000017449) #27	C1H1orf131 (ENSMMUG00000005803) #28	GNPAT (ENSMMUG00000005801) #29	ENSMMUG00000050564	EXOC8 (ENSMMUG00000005243) #30	SPRTN (ENSMMUG00000005244) #31	EGLN1 (ENSMMUG00000053396) #32	TSNAX (ENSMMUG00000016204) #33	DISC1 (ENSMMUG00000013119) #34	SIPA1L2 (ENSMMUG00000012068) #35	NTPCR (ENSMMUG00000063981) #37
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00390000014067	ENSGT00940000156644 #10	ENSGT00390000016262.i	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00910000147355	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Olive baboon	MODERN SPECIES		ENSPANG00000035259	RAB4A (ENSPANG00000021029) #11	CCSAP (ENSPANG00000010018) #12	ENSPANG00000046770	ACTA1 (ENSPANG00000005524) #13	NUP133 (ENSPANG00000019885) #14	ENSPANG00000045446	ABCB10 (ENSPANG00000018733) #15	TAF5L (ENSPANG00000006215) #16	URB2 (ENSPANG00000002245) #17	ENSPANG00000037909	GALNT2 (ENSPANG00000014846) #18	PGBD5 (ENSPANG00000036150) #19	COG2 (ENSPANG00000009759) #20	AGT (ENSPANG00000019886) #21	CAPN9 (ENSPANG00000019210) #22	C1orf198 (ENSPANG00000018734) #23	TTC13 (ENSPANG00000021030) #24	ARV1 (ENSPANG00000015278) #25	FAM89A (ENSPANG00000009144) #26	TRIM67 (ENSPANG00000023506) #27	C1orf131 (ENSPANG00000010691) #28	GNPAT (ENSPANG00000019748) #29	EXOC8 (ENSPANG00000021580) #30	SPRTN (ENSPANG00000017798) #31	EGLN1 (ENSPANG00000017983) #32	TSNAX (ENSPANG00000008379) #33	DISC1 (ENSPANG00000006042) #34	SIPA1L2 (ENSPANG00000024427) #35	MAP10 (ENSPANG00000030141) #36	NTPCR (ENSPANG00000009145) #37
Cercopithecinae_d	ANCESTRAL SPECIES	68			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00910000148069	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00910000147355	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Sooty mangabey	MODERN SPECIES	449				RHOU (ENSCATG00000040681) #10	RAB4A (ENSCATG00000037018) #11	CCSAP (ENSCATG00000018434) #12	ACTA1 (ENSCATG00000029628) #13	NUP133 (ENSCATG00000042733) #14	ABCB10 (ENSCATG00000040900) #15	TAF5L (ENSCATG00000038111) #16	URB2 (ENSCATG00000043366) #17	GALNT2 (ENSCATG00000024521) #18	PGBD5 (ENSCATG00000033334) #19	COG2 (ENSCATG00000013816) #20	AGT (ENSCATG00000036835) #21	CAPN9 (ENSCATG00000028850) #22	C1orf198 (ENSCATG00000008477) #23	TTC13 (ENSCATG00000011910) #24	ARV1 (ENSCATG00000036551) #25	FAM89A (ENSCATG00000032244) #26	ENSCATG00000039256	TRIM67 (ENSCATG00000031750) #27	ENSCATG00000042216	C1orf131 (ENSCATG00000018165) #28	ENSCATG00000036612	GNPAT (ENSCATG00000038210) #29	EXOC8 (ENSCATG00000023140) #30	SPRTN (ENSCATG00000037067) #31	EGLN1 (ENSCATG00000042103) #32	TSNAX (ENSCATG00000037048) #33	DISC1 (ENSCATG00000018901) #34
Drill	MODERN SPECIES	1461												GALNT2 (ENSMLEG00000030798) #18	PGBD5 (ENSMLEG00000031442) #19	COG2 (ENSMLEG00000030518) #20	AGT (ENSMLEG00000033716) #21	CAPN9 (ENSMLEG00000032786) #22	C1orf198 (ENSMLEG00000031597) #23	TTC13 (ENSMLEG00000039215) #24	ARV1 (ENSMLEG00000035656) #25	ENSMLEG00000041393
Vervet Monkey	MODERN SPECIES	17	RGS4 (ENSCSAG00000010658)	CCDC190 (ENSCSAG00000010652)	RHOU (ENSCSAG00000010641) #10	ENSCSAG00000000232	RAB4A (ENSCSAG00000010634) #11	ENSCSAG00000019365	CCSAP (ENSCSAG00000010628) #12	ACTA1 (ENSCSAG00000010625) #13	ABCB10 (ENSCSAG00000010616) #15	TAF5L (ENSCSAG00000010605) #16	URB2 (ENSCSAG00000010599) #17	GALNT2 (ENSCSAG00000010590) #18	PGBD5 (ENSCSAG00000010581) #19	COG2 (ENSCSAG00000010573) #20	AGT (ENSCSAG00000010562) #21	CAPN9 (ENSCSAG00000010513) #22	C1orf198 (ENSCSAG00000010409) #23	TTC13 (ENSCSAG00000010406) #24	ARV1 (ENSCSAG00000010401) #25	FAM89A (ENSCSAG00000010395) #26	TRIM67 (ENSCSAG00000010376) #27	C1orf131 (ENSCSAG00000010331) #28	GNPAT (ENSCSAG00000010322) #29	EXOC8 (ENSCSAG00000019366) #30	SPRTN (ENSCSAG00000010313) #31	EGLN1 (ENSCSAG00000010297) #32	TSNAX (ENSCSAG00000010285) #33	DISC1 (ENSCSAG00000010261) #34	SIPA1L2 (ENSCSAG00000010209) #35	MAP10 (ENSCSAG00000019367) #36	NTPCR (ENSCSAG00000010197) #37
Rhinopithecus	ANCESTRAL SPECIES	180			ENSGT00940000156644 #10	ENSGT00390000016262.i	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00910000146864	ENSGT00940000168855	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00860000134306.b	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34
Black snub-nosed monkey	MODERN SPECIES	795			RHOU (ENSRBIG00000028509) #10	RAB4A (ENSRBIG00000043096) #11	CCSAP (ENSRBIG00000035260) #12	ACTA1 (ENSRBIG00000037124) #13	NUP133 (ENSRBIG00000000488) #14	ABCB10 (ENSRBIG00000032047) #15	TAF5L (ENSRBIG00000034205) #16	URB2 (ENSRBIG00000037937) #17	GALNT2 (ENSRBIG00000006916) #18	PGBD5 (ENSRBIG00000027879) #19	ENSRBIG00000041244	COG2 (ENSRBIG00000032532) #20	AGT (ENSRBIG00000038862) #21	CAPN9 (ENSRBIG00000028536) #22	C1orf198 (ENSRBIG00000027536) #23	TTC13 (ENSRBIG00000020485) #24	ARV1 (ENSRBIG00000035747) #25	FAM89A (ENSRBIG00000034973) #26	ENSRBIG00000033893	ENSRBIG00000037209	C1orf131 (ENSRBIG00000039062) #28	GNPAT (ENSRBIG00000035076) #29	EXOC8 (ENSRBIG00000000873) #30	ENSRBIG00000033943	SPRTN (ENSRBIG00000039766) #31	EGLN1 (ENSRBIG00000027887) #32	TSNAX (ENSRBIG00000040246) #33	ENSRBIG00000040620 #34
Golden snub-nosed monkey	MODERN SPECIES	1770		RHOU (ENSRROG00000045420) #10	ENSRROG00000041141	RAB4A (ENSRROG00000043523) #11	CCSAP (ENSRROG00000000475) #12	ACTA1 (ENSRROG00000032702) #13	NUP133 (ENSRROG00000004938) #14	ABCB10 (ENSRROG00000036479) #15	TAF5L (ENSRROG00000044003) #16	URB2 (ENSRROG00000039854) #17	GALNT2 (ENSRROG00000040459) #18	PGBD5 (ENSRROG00000035909) #19	ENSRROG00000013637	COG2 (ENSRROG00000037474) #20	AGT (ENSRROG00000043839) #21	CAPN9 (ENSRROG00000040749) #22	C1orf198 (ENSRROG00000031794) #23	TTC13 (ENSRROG00000027549) #24	ARV1 (ENSRROG00000030987) #25	ENSRROG00000012274	ENSRROG00000000171	TRIM67 (ENSRROG00000044976) #27	ENSRROG00000028982	C1orf131 (ENSRROG00000033016) #28	GNPAT (ENSRROG00000030570) #29	EXOC8 (ENSRROG00000001497) #30	SPRTN (ENSRROG00000043645) #31	ENSRROG00000010467 #32	TSNAX (ENSRROG00000044480) #33	DISC1 (ENSRROG00000036476) #34	SIPA1L2 (ENSRROG00000044837) #35
Platyrrhini	ANCESTRAL SPECIES	24	ENSGT00940000156810	ENSGT01030000234517.H.b	ENSGT00940000156644 #10	ENSGT00910000146652	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT01050000244950.a.b.h	ENSGT00910000146864	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35
Cebidae	ANCESTRAL SPECIES	23	ENSGT00390000001627.f	ENSGT00940000156810	ENSGT01030000234517.H.b	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Cebidae_a	ANCESTRAL SPECIES	11	ENSGT00390000001627.f	ENSGT00940000156810	ENSGT01030000234517.H.b	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.w #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000168120	ENSGT00940000154071.B #27	ENSGT00910000146864	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.r #34	ENSGT00940000157388 #35
Capuchin	MODERN SPECIES	42	COQ8A (ENSCCAG00000028650)	CDC42BPA (ENSCCAG00000037751)	RHOU (ENSCCAG00000011687) #10	RAB4A (ENSCCAG00000024652) #11	CCSAP (ENSCCAG00000024046) #12	ACTA1 (ENSCCAG00000035682) #13	NUP133 (ENSCCAG00000030378) #14	ABCB10 (ENSCCAG00000028677) #15	TAF5L (ENSCCAG00000027314) #16	URB2 (ENSCCAG00000023932) #17	ENSCCAG00000016358	GALNT2 (ENSCCAG00000037370) #18	PGBD5 (ENSCCAG00000020494) #19	COG2 (ENSCCAG00000027158) #20	AGT (ENSCCAG00000008245) #21	CAPN9 (ENSCCAG00000020272) #22	C1orf198 (ENSCCAG00000037135) #23	TTC13 (ENSCCAG00000030880) #24	ARV1 (ENSCCAG00000036288) #25	FAM89A (ENSCCAG00000022206) #26	ENSCCAG00000031899	TRIM67 (ENSCCAG00000020526) #27	ENSCCAG00000026627	C1orf131 (ENSCCAG00000032033) #28	GNPAT (ENSCCAG00000034297) #29	EXOC8 (ENSCCAG00000003798) #30	SPRTN (ENSCCAG00000022861) #31	EGLN1 (ENSCCAG00000021728) #32	TSNAX (ENSCCAG00000025312) #33	DISC1 (ENSCCAG00000034121) #34	SIPA1L2 (ENSCCAG00000037263) #35
Bolivian squirrel monkey	MODERN SPECIES	176					RHOU (ENSSBOG00000021186) #10	RAB4A (ENSSBOG00000027352) #11	CCSAP (ENSSBOG00000021441) #12	NUP133 (ENSSBOG00000021899) #14	ABCB10 (ENSSBOG00000027736) #15	TAF5L (ENSSBOG00000000069) #16	URB2 (ENSSBOG00000023055) #17	GALNT2 (ENSSBOG00000024303) #18	PGBD5 (ENSSBOG00000024570) #19	COG2 (ENSSBOG00000021187) #20	AGT (ENSSBOG00000025357) #21	CAPN9 (ENSSBOG00000021363) #22	C1orf198 (ENSSBOG00000021132) #23	TTC13 (ENSSBOG00000021664) #24	ARV1 (ENSSBOG00000020317) #25	ENSSBOG00000021543	TRIM67 (ENSSBOG00000026189) #27	ENSSBOG00000023859	C1orf131 (ENSSBOG00000025430) #28	GNPAT (ENSSBOG00000012258) #29	EXOC8 (ENSSBOG00000014075) #30	SPRTN (ENSSBOG00000020001) #31	ENSSBOG00000022045 #32	TSNAX (ENSSBOG00000024783) #33	DISC1 (ENSSBOG00000002783) #34	SIPA1L2 (ENSSBOG00000021530) #35	MAP10 (ENSSBOG00000023089) #36
Marmoset	MODERN SPECIES	10	CDC42BPA (ENSCJAG00000012980)	ENSCJAG00000075541	RHOU (ENSCJAG00000046177) #10	ENSCJAG00000011215 #11	CCSAP (ENSCJAG00000011187) #12	ACTA1 (ENSCJAG00000011114) #13	NUP133 (ENSCJAG00000011040) #14	ABCB10 (ENSCJAG00000011011) #15	TAF5L (ENSCJAG00000010986) #16	URB2 (ENSCJAG00000010968) #17	ENSCJAG00000076473	GALNT2 (ENSCJAG00000010925) #18	PGBD5 (ENSCJAG00000011901) #19	COG2 (ENSCJAG00000011909) #20	AGT (ENSCJAG00000038998) #21	CAPN9 (ENSCJAG00000011997) #22	C1orf198 (ENSCJAG00000012038) #23	ENSCJAG00000077887	ENSCJAG00000076062	SYT14 (ENSCJAG00000000322)	SERTAD4 (ENSCJAG00000042537)	HHAT (ENSCJAG00000000310)	KCNH1 (ENSCJAG00000038943)	RCOR3 (ENSCJAG00000000282)	TRAF5 (ENSCJAG00000000257)	ENSCJAG00000015904	RD3 (ENSCJAG00000074339)	ENSCJAG00000070569	PACC1 (ENSCJAG00000015742)	PPP2R5A (ENSCJAG00000015748)	ENSCJAG00000072106
Mas night monkey	MODERN SPECIES	958	RHOU (ENSANAG00000023279) #10	ENSANAG00000020122	RAB4A (ENSANAG00000032124) #11	CCSAP (ENSANAG00000002364) #12	ACTA1 (ENSANAG00000033052) #13	NUP133 (ENSANAG00000031425) #14	ABCB10 (ENSANAG00000028541) #15	TAF5L (ENSANAG00000030674) #16	URB2 (ENSANAG00000033963) #17	GALNT2 (ENSANAG00000023609) #18	PGBD5 (ENSANAG00000037429) #19	ENSANAG00000024312	ENSANAG00000028566	COG2 (ENSANAG00000023360) #20	AGT (ENSANAG00000021401) #21	CAPN9 (ENSANAG00000021609) #22	C1orf198 (ENSANAG00000025811) #23	TTC13 (ENSANAG00000023881) #24	ARV1 (ENSANAG00000035550) #25	FAM89A (ENSANAG00000036791) #26	ENSANAG00000004938	ENSANAG00000003766	TRIM67 (ENSANAG00000022764) #27	C1orf131 (ENSANAG00000025828) #28	GNPAT (ENSANAG00000026069) #29	EXOC8 (ENSANAG00000011856) #30	SPRTN (ENSANAG00000034569) #31	EGLN1 (ENSANAG00000029262) #32	TSNAX (ENSANAG00000023733) #33	DISC1 (ENSANAG00000036892) #34	SIPA1L2 (ENSANAG00000033139) #35
Tarsier	MODERN SPECIES	7260														COG2 (ENSTSYG00000007527) #20	AGT (ENSTSYG00000005134) #21	CAPN9 (ENSTSYG00000007861) #22
Strepsirrhini	ANCESTRAL SPECIES					ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512.b #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.q.a #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Lemuriformes	ANCESTRAL SPECIES	6	ENSGT00390000018206	ENSGT00530000065031	ENSGT00390000003249	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512.b #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.q.a #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Mouse lemur	MODERN SPECIES	8	AKT3 (ENSMICG00000015514)	SDCCAG8 (ENSMICG00000015485)	CEP170 (ENSMICG00000011831)	PLD5 (ENSMICG00000003488)	MAP1LC3C (ENSMICG00000041705)	EXO1 (ENSMICG00000042831)	WDR64 (ENSMICG00000003466)	OPN3 (ENSMICG00000003465)	KMO (ENSMICG00000003459)	ENSMICG00000003451	RGS7 (ENSMICG00000003443)	GALNT2 (ENSMICG00000004134) #18	PGBD5 (ENSMICG00000004140) #19	COG2 (ENSMICG00000004171) #20	AGT (ENSMICG00000028058) #21	CAPN9 (ENSMICG00000004194) #22	C1orf198 (ENSMICG00000037972) #23	TTC13 (ENSMICG00000004208) #24	ENSMICG00000030230	ARV1 (ENSMICG00000004225) #25	FAM89A (ENSMICG00000027871) #26	TRIM67 (ENSMICG00000004233) #27	ENSMICG00000000143 #28	GNPAT (ENSMICG00000029639) #29	SPRTN (ENSMICG00000029926) #31	EGLN1 (ENSMICG00000010348) #32	TSNAX (ENSMICG00000043895) #33	DISC1 (ENSMICG00000010360) #34	SIPA1L2 (ENSMICG00000015451) #35	MAP10 (ENSMICG00000027261) #36	NTPCR (ENSMICG00000015482) #37
Lemuriformes_a	ANCESTRAL SPECIES	14	ENSGT00390000018206	ENSGT00530000065031	ENSGT00390000003249	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512.b #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176.q.a #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Coquerels sifaka	MODERN SPECIES	812	APOBR (ENSPCOG00000016637)	CLN3 (ENSPCOG00000016614)	RHOU (ENSPCOG00000023566) #10	ENSPCOG00000027532 #11	CCSAP (ENSPCOG00000013932) #12	ACTA1 (ENSPCOG00000022008) #13	NUP133 (ENSPCOG00000014384) #14	ABCB10 (ENSPCOG00000021328) #15	TAF5L (ENSPCOG00000019763) #16	ENSPCOG00000017558	URB2 (ENSPCOG00000023537) #17	GALNT2 (ENSPCOG00000019563) #18	PGBD5 (ENSPCOG00000013449) #19	COG2 (ENSPCOG00000020732) #20	AGT (ENSPCOG00000027337) #21	CAPN9 (ENSPCOG00000028789) #22	C1orf198 (ENSPCOG00000028783) #23	TTC13 (ENSPCOG00000026229) #24	ARV1 (ENSPCOG00000018580) #25	FAM89A (ENSPCOG00000023187) #26	TRIM67 (ENSPCOG00000021846) #27	C1orf131 (ENSPCOG00000023110) #28	ENSPCOG00000020632	GNPAT (ENSPCOG00000021460) #29	EXOC8 (ENSPCOG00000000620) #30	ENSPCOG00000009251 #31	EGLN1 (ENSPCOG00000025942) #32	TSNAX (ENSPCOG00000028517) #33	ENSPCOG00000023345 #34	ENSPCOG00000018491 #34	SIPA1L2 (ENSPCOG00000018831) #35
Greater bamboo lemur	MODERN SPECIES	251												GALNT2 (ENSPSMG00000005037) #18	PGBD5 (ENSPSMG00000004965) #19	COG2 (ENSPSMG00000004877) #20	AGT (ENSPSMG00000004800) #21	CAPN9 (ENSPSMG00000004764) #22	C1orf198 (ENSPSMG00000004685) #23	TTC13 (ENSPSMG00000004617) #24	ARV1 (ENSPSMG00000004466) #25	FAM89A (ENSPSMG00000004442) #26	TRIM67 (ENSPSMG00000004427) #27	C1orf131 (ENSPSMG00000004394) #28	ENSPSMG00000004359	ENSPSMG00000004356 #29
Bushbaby	MODERN SPECIES	231	TOMM20 (ENSOGAG00000032693)	IRF2BP2 (ENSOGAG00000002391)	TARBP1 (ENSOGAG00000002379)	SLC35F3 (ENSOGAG00000002376)	KCNK1 (ENSOGAG00000002272)	MAP3K21 (ENSOGAG00000010128)	PCNX2 (ENSOGAG00000004635)	NTPCR (ENSOGAG00000004633) #37	MAP10 (ENSOGAG00000024613) #36	SIPA1L2 (ENSOGAG00000007607) #35	DISC1 (ENSOGAG00000009237) #34	ENSOGAG00000005575 #33	EGLN1 (ENSOGAG00000033024) #32	SPRTN (ENSOGAG00000008666) #31	EXOC8 (ENSOGAG00000008664) #30	CAPN9 (ENSOGAG00000003044) #22	C1orf198 (ENSOGAG00000031004) #23	TTC13 (ENSOGAG00000004955) #24	ARV1 (ENSOGAG00000004960) #25	FAM89A (ENSOGAG00000004963) #26	TRIM67 (ENSOGAG00000031022) #27	C1orf131 (ENSOGAG00000011213) #28	GNPAT (ENSOGAG00000034657) #29
Laurasiatheria	ANCESTRAL SPECIES	28			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158966 #22
Hedgehog	MODERN SPECIES	3264																CAPN9 (ENSEEUG00000009691) #22
Common shrew	MODERN SPECIES	2436																CAPN9 (ENSSARG00000002675) #22
Laurasiatheria_a	ANCESTRAL SPECIES	15			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Artiodactyla	ANCESTRAL SPECIES	14				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Suina	ANCESTRAL SPECIES	6	ENSGT00940000159981	ENSGT00940000162173	ENSGT00940000162764.B	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Chacoan peccary	MODERN SPECIES	975	ZNF25 (ENSCWAG00000012685)	ENSCWAG00000012759	ZNF37A (ENSCWAG00000012827)	RHOU (ENSCWAG00000012856) #10	RAB4A (ENSCWAG00000012903) #11	CCSAP (ENSCWAG00000012973) #12	ACTA1 (ENSCWAG00000013028) #13	NUP133 (ENSCWAG00000013111) #14	ABCB10 (ENSCWAG00000013197) #15	TAF5L (ENSCWAG00000013335) #16	URB2 (ENSCWAG00000013385) #17	GALNT2 (ENSCWAG00000013429) #18	PGBD5 (ENSCWAG00000013482) #19	COG2 (ENSCWAG00000013564) #20	AGT (ENSCWAG00000013696) #21	CAPN9 (ENSCWAG00000013775) #22	C1orf198 (ENSCWAG00000014425) #23	TTC13 (ENSCWAG00000014541) #24	ARV1 (ENSCWAG00000014851) #25	FAM89A (ENSCWAG00000014940) #26	TRIM67 (ENSCWAG00000014976) #27	C1orf131 (ENSCWAG00000015186) #28	GNPAT (ENSCWAG00000015200) #29	EXOC8 (ENSCWAG00000015253) #30	SPRTN (ENSCWAG00000015270) #31	EGLN1 (ENSCWAG00000015320) #32	TSNAX (ENSCWAG00000015346) #33	DISC1 (ENSCWAG00000015444) #34	ENSCWAG00000017068	SIPA1L2 (ENSCWAG00000017097) #35	MAP10 (ENSCWAG00000017340) #36
Pig	MODERN SPECIES	5	ZNF25 (ENSSSCG00000010196)	ENSSSCG00000028345	ZNF37A (ENSSSCG00000031589)	RHOU (ENSSSCG00000024418) #10	RAB4A (ENSSSCG00000036039) #11	CCSAP (ENSSSCG00000023776) #12	ACTA1 (ENSSSCG00000010190) #13	NUP133 (ENSSSCG00000010189) #14	ABCB10 (ENSSSCG00000010188) #15	TAF5L (ENSSSCG00000010187) #16	URB2 (ENSSSCG00000010186) #17	GALNT2 (ENSSSCG00000010185) #18	PGBD5 (ENSSSCG00000021027) #19	COG2 (ENSSSCG00000010183) #20	AGT (ENSSSCG00000010184) #21	CAPN9 (ENSSSCG00000010182) #22	C1orf198 (ENSSSCG00000010181) #23	TTC13 (ENSSSCG00000010180) #24	ARV1 (ENSSSCG00000010179) #25	FAM89A (ENSSSCG00000038765) #26	TRIM67 (ENSSSCG00000010177) #27	C1orf131 (ENSSSCG00000010176) #28	GNPAT (ENSSSCG00000010175) #29	EXOC8 (ENSSSCG00000010174) #30	SPRTN (ENSSSCG00000040087) #31	EGLN1 (ENSSSCG00000010172) #32	ENSSSCG00000040694	TSNAX (ENSSSCG00000010171) #33	DISC1 (ENSSSCG00000010170) #34	SIPA1L2 (ENSSSCG00000010169) #35	MAP10 (ENSSSCG00000010167) #36
Artiodactyla_a	ANCESTRAL SPECIES	14				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Camelidae	ANCESTRAL SPECIES	94						ENSGT00940000156644 #10	ENSGT00940000157464.r #11	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Arabian camel	MODERN SPECIES	2	IRF2BP2 (ENSCDRG00005006772)	ENSCDRG00005006737	ENSCDRG00005006671	ENSCDRG00005015134	RHOU (ENSCDRG00005015120) #10	ENSCDRG00005014984 #11	ENSCDRG00005014779	NUP133 (ENSCDRG00005014682) #14	ABCB10 (ENSCDRG00005014571) #15	TAF5L (ENSCDRG00005014497) #16	URB2 (ENSCDRG00005014428) #17	GALNT2 (ENSCDRG00005014350) #18	PGBD5 (ENSCDRG00005014288) #19	COG2 (ENSCDRG00005014234) #20	AGT (ENSCDRG00005014204) #21	CAPN9 (ENSCDRG00005013385) #22	ENSCDRG00005013308 #23	TTC13 (ENSCDRG00005013206) #24	ARV1 (ENSCDRG00005013157) #25	FAM89A (ENSCDRG00005013119) #26	TRIM67 (ENSCDRG00005012911) #27	C1orf131 (ENSCDRG00005012828) #28	GNPAT (ENSCDRG00005012701) #29	EXOC8 (ENSCDRG00005012668) #30	SPRTN (ENSCDRG00005012591) #31	EGLN1 (ENSCDRG00005012530) #32	DISC1 (ENSCDRG00005012292) #34	SIPA1L2 (ENSCDRG00005011447) #35	MAP10 (ENSCDRG00005011382) #36	NTPCR (ENSCDRG00005011308) #37	PCNX2 (ENSCDRG00005010944)
Alpaca	MODERN SPECIES	567																ENSVPAG00000001307 #22
Artiodactyla_b	ANCESTRAL SPECIES	13				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000161899	ENSGT00940000154289.B	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00950000183183.b.a.q.a.a.a	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000161899	ENSGT00940000154289.B	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00950000183183.b.a.q.a.a.a	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Odontoceti_a	ANCESTRAL SPECIES	11			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00950000183183.b.a.q.a.a.a	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000018683 #37	ENSGT00940000157374
Dolphin	MODERN SPECIES	451														COG2 (ENSTTRG00000003942) #20	AGT (ENSTTRG00000003960) #21	ENSTTRG00000003965 #22	C1orf198 (ENSTTRG00000003969) #23	TTC13 (ENSTTRG00000003972) #24	ARV1 (ENSTTRG00000003976) #25
Odontoceti_b	ANCESTRAL SPECIES	14			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00950000183183.b.a.q.a.a.a	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000018683 #37	ENSGT00940000157374
Monodontidae	ANCESTRAL SPECIES	14			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00950000183183.b.a.q.a.a.a	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000018683 #37	ENSGT00940000157374
Beluga whale	MODERN SPECIES	46	RHOU (ENSDLEG00000008603) #10	RAB4A (ENSDLEG00000008574) #11	CCSAP (ENSDLEG00000008558) #12	ACTA1 (ENSDLEG00000008382) #13	NUP133 (ENSDLEG00000007858) #14	ABCB10 (ENSDLEG00000007817) #15	ENSDLEG00000007813 #16	ENSDLEG00000007807 #16	URB2 (ENSDLEG00000007804) #17	ENSDLEG00000007800	ENSDLEG00000007798	GALNT2 (ENSDLEG00000007783) #18	PGBD5 (ENSDLEG00000007772) #19	COG2 (ENSDLEG00000007748) #20	AGT (ENSDLEG00000007740) #21	ENSDLEG00000007732 #22	CUNH1orf198 (ENSDLEG00000007710) #23	TTC13 (ENSDLEG00000007691) #24	ARV1 (ENSDLEG00000007682) #25	FAM89A (ENSDLEG00000007676) #26	TRIM67 (ENSDLEG00000007668) #27	C1orf131 (ENSDLEG00000007655) #28	GNPAT (ENSDLEG00000007597) #29	EXOC8 (ENSDLEG00000007592) #30	SPRTN (ENSDLEG00000007584) #31	EGLN1 (ENSDLEG00000007575) #32	TSNAX (ENSDLEG00000007566) #33	DISC1 (ENSDLEG00000007541) #34	SIPA1L2 (ENSDLEG00000007486) #35	NTPCR (ENSDLEG00000007439) #37	PCNX2 (ENSDLEG00000007346)
Sperm whale	MODERN SPECIES	12	ENSPCTG00005015697	ENSPCTG00005015859	RHOU (ENSPCTG00005015892) #10	RAB4A (ENSPCTG00005015948) #11	CCSAP (ENSPCTG00005016016) #12	ACTA1 (ENSPCTG00005016061) #13	NUP133 (ENSPCTG00005016132) #14	ABCB10 (ENSPCTG00005016326) #15	TAF5L (ENSPCTG00005016481) #16	URB2 (ENSPCTG00005016547) #17	ENSPCTG00005016637	GALNT2 (ENSPCTG00005016676) #18	PGBD5 (ENSPCTG00005009891) #19	COG2 (ENSPCTG00005010066) #20	AGT (ENSPCTG00005010165) #21	ENSPCTG00005010277 #22	C20H1orf198 (ENSPCTG00005010444) #23	TTC13 (ENSPCTG00005010546) #24	ARV1 (ENSPCTG00005010988) #25	FAM89A (ENSPCTG00005011074) #26	TRIM67 (ENSPCTG00005011115) #27	C1orf131 (ENSPCTG00005011342) #28	GNPAT (ENSPCTG00005011450) #29	EXOC8 (ENSPCTG00005011506) #30	SPRTN (ENSPCTG00005011531) #31	EGLN1 (ENSPCTG00005011619) #32	TSNAX (ENSPCTG00005011781) #33	ENSPCTG00005011808 #34	ENSPCTG00005011886 #34	SIPA1L2 (ENSPCTG00005011979) #35	MAP10 (ENSPCTG00005012130) #36
Blue whale	MODERN SPECIES	7	RHOU (ENSBMSG00010014859) #10	ENSBMSG00010014844	RAB4A (ENSBMSG00010014811) #11	CCSAP (ENSBMSG00010014786) #12	ACTA1 (ENSBMSG00010014761) #13	NUP133 (ENSBMSG00010014739) #14	ABCB10 (ENSBMSG00010014666) #15	ENSBMSG00010014627 #16	URB2 (ENSBMSG00010014573) #17	ENSBMSG00010014536	ENSBMSG00010014518	GALNT2 (ENSBMSG00010014469) #18	PGBD5 (ENSBMSG00010014408) #19	COG2 (ENSBMSG00010014222) #20	AGT (ENSBMSG00010014152) #21	CAPN9 (ENSBMSG00010013893) #22	C1orf198 (ENSBMSG00010013799) #23	ENSBMSG00010013788	TTC13 (ENSBMSG00010013728) #24	FAM89A (ENSBMSG00010013697) #26	TRIM67 (ENSBMSG00010013662) #27	C1orf131 (ENSBMSG00010013641) #28	GNPAT (ENSBMSG00010013626) #29	EXOC8 (ENSBMSG00010013614) #30	SPRTN (ENSBMSG00010013599) #31	EGLN1 (ENSBMSG00010013590) #32	ENSBMSG00010019659 #33	ENSBMSG00010019646 #33	ENSBMSG00010019610 #34	ENSBMSG00010019578 #34	SIPA1L2 (ENSBMSG00010019471) #35
Pecora	ANCESTRAL SPECIES	44				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.i.a #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22
Percora_a	ANCESTRAL SPECIES	40				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b.i.a #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22
Siberian musk deer	MODERN SPECIES	1215														COG2 (ENSMMSG00000022669) #20	AGT (ENSMMSG00000022656) #21	ENSMMSG00000022648 #22
Laurasiatheria_b	ANCESTRAL SPECIES	15			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Carnivora	ANCESTRAL SPECIES	16			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00960000190028	ENSGT00940000157388 #35
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00960000190028	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000155309	ENSGT00550000074870.b.db.a	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00500000045533	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531.a #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00960000190028	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Giant Panda	MODERN SPECIES	16	ENSAMEG00000027236	ENSAMEG00000010271	ENSAMEG00000026500	ENSAMEG00000009122 #10	RAB4A (ENSAMEG00000009125) #11	ENSAMEG00000028987	ENSAMEG00000024997 #12	ACTA1 (ENSAMEG00000005186) #13	NUP133 (ENSAMEG00000009151) #14	ABCB10 (ENSAMEG00000009196) #15	TAF5L (ENSAMEG00000026115) #16	URB2 (ENSAMEG00000009206) #17	PGBD5 (ENSAMEG00000009652) #19	COG2 (ENSAMEG00000009660) #20	ENSAMEG00000009713 #21	ENSAMEG00000027414 #22	C1orf198 (ENSAMEG00000002461) #23	TTC13 (ENSAMEG00000002472) #24	ARV1 (ENSAMEG00000002517) #25	FAM89A (ENSAMEG00000025184) #26	TRIM67 (ENSAMEG00000002527) #27	C1orf131 (ENSAMEG00000002541) #28	GNPAT (ENSAMEG00000002552) #29	EXOC8 (ENSAMEG00000002598) #30	SPRTN (ENSAMEG00000002603) #31	ENSAMEG00000024244 #32	ENSAMEG00000029151	ENSAMEG00000002637 #33	ENSAMEG00000025464	DISC1 (ENSAMEG00000002649) #34	SIPA1L2 (ENSAMEG00000002663) #35
Ursus	ANCESTRAL SPECIES	6	ENSGT00940000154445.c.a	ENSGT00940000155309	ENSGT00550000074870.b.db.a	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531.a #21	ENSGT00940000158966 #22	ENSGT00960000189367	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37	ENSGT00940000157374
Polar bear	MODERN SPECIES	160				ENSUMAG00000004661	RHOU (ENSUMAG00000004663) #10	RAB4A (ENSUMAG00000004668) #11	ACTA1 (ENSUMAG00000004677) #13	NUP133 (ENSUMAG00000004688) #14	ABCB10 (ENSUMAG00000004700) #15	TAF5L (ENSUMAG00000004719) #16	URB2 (ENSUMAG00000004728) #17	GALNT2 (ENSUMAG00000004779) #18	PGBD5 (ENSUMAG00000005109) #19	COG2 (ENSUMAG00000005115) #20	AGT (ENSUMAG00000005124) #21	CAPN9 (ENSUMAG00000005142) #22	ENSUMAG00000005253	TTC13 (ENSUMAG00000005323) #24	ARV1 (ENSUMAG00000005916) #25	TRIM67 (ENSUMAG00000005921) #27	C1orf131 (ENSUMAG00000005947) #28	GNPAT (ENSUMAG00000005953) #29	SPRTN (ENSUMAG00000005981) #31	ENSUMAG00000005987 #32	TSNAX (ENSUMAG00000005995) #33	DISC1 (ENSUMAG00000006058) #34	ENSUMAG00000006471	SIPA1L2 (ENSUMAG00000006513) #35	MAP10 (ENSUMAG00000006674) #36	NTPCR (ENSUMAG00000006678) #37	PCNX2 (ENSUMAG00000006685)
American black bear	MODERN SPECIES	8968																ENSUAMG00000002543 #22
Mustelinae	ANCESTRAL SPECIES	123														ENSGT00390000012040.h #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00960000190028	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
American mink	MODERN SPECIES	298														COG2 (ENSNVIG00000021555) #20	AGT (ENSNVIG00000021543) #21	CAPN9 (ENSNVIG00000021473) #22	C1orf198 (ENSNVIG00000021453) #23	TTC13 (ENSNVIG00000021413) #24	ARV1 (ENSNVIG00000021392) #25	TRIM67 (ENSNVIG00000021345) #27	ENSNVIG00000021328 #28	GNPAT (ENSNVIG00000021296) #29	EXOC8 (ENSNVIG00000021291) #30	SPRTN (ENSNVIG00000021275) #31	ENSNVIG00000021263 #32	TSNAX (ENSNVIG00000021237) #33	ENSNVIG00000021228	DISC1 (ENSNVIG00000020959) #34	SIPA1L2 (ENSNVIG00000020811) #35	MAP10 (ENSNVIG00000020787) #36
Ferret	MODERN SPECIES	388													ENSMPUG00000019620	COG2 (ENSMPUG00000004611) #20	AGT (ENSMPUG00000004623) #21	CAPN9 (ENSMPUG00000004634) #22	C1orf198 (ENSMPUG00000005382) #23	TTC13 (ENSMPUG00000005392) #24	ARV1 (ENSMPUG00000005415) #25	ENSMPUG00000005446	TRIM67 (ENSMPUG00000005450) #27	ENSMPUG00000005467	C1orf131 (ENSMPUG00000005474) #28	GNPAT (ENSMPUG00000005486) #29	EXOC8 (ENSMPUG00000019621) #30	SPRTN (ENSMPUG00000005508) #31	EGLN1 (ENSMPUG00000005525) #32	TSNAX (ENSMPUG00000005572) #33	ENSMPUG00000019622	DISC1 (ENSMPUG00000005581) #34	SIPA1L2 (ENSMPUG00000005604) #35
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000155109.b	ENSGT00940000154445.c.a.g	ENSGT00940000155309	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00960000190028	ENSGT00940000157388 #35
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00940000154445.c.a.g	ENSGT00940000155309	ENSGT00940000156644 #10	ENSGT00390000016988.a.a.a.b.a.b.b	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00950000185331	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36
Dog	MODERN SPECIES	32	ENSCAFG00845001878	ENSCAFG00845001859	RHOU (ENSCAFG00845001719) #10	ENSCAFG00845001681	RAB4A (ENSCAFG00845001626) #11	CCSAP (ENSCAFG00845001564) #12	NUP133 (ENSCAFG00845001518) #14	ABCB10 (ENSCAFG00845001468) #15	ENSCAFG00845001416	TAF5L (ENSCAFG00845001360) #16	URB2 (ENSCAFG00845001297) #17	GALNT2 (ENSCAFG00845001196) #18	PGBD5 (ENSCAFG00845001146) #19	COG2 (ENSCAFG00845001085) #20	AGT (ENSCAFG00845001060) #21	CAPN9 (ENSCAFG00845000946) #22	ENSCAFG00845000866 #23	TTC13 (ENSCAFG00845000829) #24	ARV1 (ENSCAFG00845000779) #25	FAM89A (ENSCAFG00845000764) #26	TRIM67 (ENSCAFG00845000716) #27	C4H1orf131 (ENSCAFG00845000693) #28	GNPAT (ENSCAFG00845000642) #29	EXOC8 (ENSCAFG00845000604) #30	SPRTN (ENSCAFG00845000572) #31	EGLN1 (ENSCAFG00845000514) #32	TSNAX (ENSCAFG00845000505) #33	ENSCAFG00845000495	DISC1 (ENSCAFG00845000475) #34	SIPA1L2 (ENSCAFG00845000316) #35	MAP10 (ENSCAFG00845000217) #36
Dingo	MODERN SPECIES	258			RHOU (ENSCAFG00020027267) #10	ENSCAFG00020027264	RAB4A (ENSCAFG00020027260) #11	CCSAP (ENSCAFG00020027258) #12	ACTA1 (ENSCAFG00020027254) #13	NUP133 (ENSCAFG00020027232) #14	ABCB10 (ENSCAFG00020027226) #15	TAF5L (ENSCAFG00020027222) #16	URB2 (ENSCAFG00020027217) #17	GALNT2 (ENSCAFG00020027215) #18	PGBD5 (ENSCAFG00020027214) #19	COG2 (ENSCAFG00020027211) #20	AGT (ENSCAFG00020027209) #21	CAPN9 (ENSCAFG00020027206) #22	C1orf198 (ENSCAFG00020027205) #23	TTC13 (ENSCAFG00020027200) #24	ENSCAFG00020027198	ARV1 (ENSCAFG00020027197) #25	FAM89A (ENSCAFG00020027196) #26	TRIM67 (ENSCAFG00020027195) #27	C1orf131 (ENSCAFG00020027193) #28	GNPAT (ENSCAFG00020027192) #29	EXOC8 (ENSCAFG00020027190) #30	SPRTN (ENSCAFG00020027189) #31	EGLN1 (ENSCAFG00020027187) #32	TSNAX (ENSCAFG00020027186) #33	DISC1 (ENSCAFG00020027182) #34	SIPA1L2 (ENSCAFG00020027174) #35	MAP10 (ENSCAFG00020027169) #36
Red fox	MODERN SPECIES	72				RHOU (ENSVVUG00000006592) #10	RAB4A (ENSVVUG00000006614) #11	CCSAP (ENSVVUG00000006619) #12	NUP133 (ENSVVUG00000006631) #14	ACTA1 (ENSVVUG00000006661) #13	ABCB10 (ENSVVUG00000006678) #15	TAF5L (ENSVVUG00000006735) #16	URB2 (ENSVVUG00000006747) #17	GALNT2 (ENSVVUG00000006765) #18	PGBD5 (ENSVVUG00000006768) #19	COG2 (ENSVVUG00000006773) #20	AGT (ENSVVUG00000006785) #21	CAPN9 (ENSVVUG00000006797) #22	C1orf198 (ENSVVUG00000006952) #23	TTC13 (ENSVVUG00000006968) #24	ARV1 (ENSVVUG00000006990) #25	TRIM67 (ENSVVUG00000006995) #27	CUNH1orf131 (ENSVVUG00000007003) #28	GNPAT (ENSVVUG00000007020) #29	EXOC8 (ENSVVUG00000007059) #30	SPRTN (ENSVVUG00000007060) #31	ENSVVUG00000007066 #32	TSNAX (ENSVVUG00000007083) #33	DISC1 (ENSVVUG00000007101) #34	ENSVVUG00000007151	SIPA1L2 (ENSVVUG00000007190) #35	MAP10 (ENSVVUG00000007291) #36	NTPCR (ENSVVUG00000007305) #37
Felidae	ANCESTRAL SPECIES	14				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675.k #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683.i #37
Panthera	ANCESTRAL SPECIES	8				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675.k #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683.i #37
Panthera_a	ANCESTRAL SPECIES	50				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675.k #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683.i #37
lion	MODERN SPECIES	11	ENSPLOG00000020708	ENSPLOG00000020700	RHOU (ENSPLOG00000020682) #10	RAB4A (ENSPLOG00000020647) #11	CCSAP (ENSPLOG00000020539) #12	ACTA1 (ENSPLOG00000020512) #13	NUP133 (ENSPLOG00000020416) #14	ABCB10 (ENSPLOG00000020346) #15	TAF5L (ENSPLOG00000020317) #16	URB2 (ENSPLOG00000020282) #17	ENSPLOG00000020254	GALNT2 (ENSPLOG00000020210) #18	PGBD5 (ENSPLOG00000020162) #19	COG2 (ENSPLOG00000020125) #20	AGT (ENSPLOG00000020094) #21	CAPN9 (ENSPLOG00000019765) #22	C1orf198 (ENSPLOG00000019687) #23	TTC13 (ENSPLOG00000019345) #24	ARV1 (ENSPLOG00000019240) #25	FAM89A (ENSPLOG00000019214) #26	TRIM67 (ENSPLOG00000019018) #27	C1orf131 (ENSPLOG00000018953) #28	GNPAT (ENSPLOG00000018930) #29	EXOC8 (ENSPLOG00000018909) #30	SPRTN (ENSPLOG00000018783) #31	EGLN1 (ENSPLOG00000018717) #32	TSNAX (ENSPLOG00000018693) #33	ENSPLOG00000018628 #34	SIPA1L2 (ENSPLOG00000018356) #35	MAP10 (ENSPLOG00000018316) #36	ENSPLOG00000018291 #37
leopard	MODERN SPECIES	76				RHOU (ENSPPRG00000012675) #10	RAB4A (ENSPPRG00000012682) #11	CCSAP (ENSPPRG00000012699) #12	ACTA1 (ENSPPRG00000012717) #13	NUP133 (ENSPPRG00000012724) #14	ABCB10 (ENSPPRG00000012739) #15	TAF5L (ENSPPRG00000012758) #16	URB2 (ENSPPRG00000012767) #17	GALNT2 (ENSPPRG00000012791) #18	PGBD5 (ENSPPRG00000012801) #19	COG2 (ENSPPRG00000012840) #20	AGT (ENSPPRG00000012856) #21	CAPN9 (ENSPPRG00000012942) #22	C1orf198 (ENSPPRG00000012974) #23	TTC13 (ENSPPRG00000012993) #24	ENSPPRG00000013014 #25	FAM89A (ENSPPRG00000013020) #26	TRIM67 (ENSPPRG00000013051) #27	C1orf131 (ENSPPRG00000013091) #28	GNPAT (ENSPPRG00000013101) #29	EXOC8 (ENSPPRG00000019949) #30	ENSPPRG00000013122 #31	EGLN1 (ENSPPRG00000013135) #32	ENSPPRG00000013142 #33	ENSPPRG00000013255 #34	SIPA1L2 (ENSPPRG00000013364) #35	NTPCR (ENSPPRG00000013384) #37	PCNX2 (ENSPPRG00000013432)
Tiger	MODERN SPECIES	238					RHOU (ENSPTIG00000011618) #10	RAB4A (ENSPTIG00000011624) #11	ENSPTIG00000011854 #12	NUP133 (ENSPTIG00000011924) #14	ABCB10 (ENSPTIG00000012102) #15	TAF5L (ENSPTIG00000012178) #16	URB2 (ENSPTIG00000012577) #17	GALNT2 (ENSPTIG00000012884) #18	PGBD5 (ENSPTIG00000013345) #19	COG2 (ENSPTIG00000013545) #20	AGT (ENSPTIG00000013957) #21	CAPN9 (ENSPTIG00000014011) #22	ENSPTIG00000014847 #23	TTC13 (ENSPTIG00000015157) #24	ARV1 (ENSPTIG00000016339) #25
Cat	MODERN SPECIES	242	ENSFCAG00000052579	IPMK (ENSFCAG00000030884)	ENSFCAG00000047966	ENSFCAG00000029085	RHOU (ENSFCAG00000036643) #10	ENSFCAG00000039950 #11	ACTA1 (ENSFCAG00000030433)	NUP133 (ENSFCAG00000000965) #14	ABCB10 (ENSFCAG00000007660) #15	TAF5L (ENSFCAG00000007661) #16	URB2 (ENSFCAG00000007662) #17	GALNT2 (ENSFCAG00000007772) #18	PGBD5 (ENSFCAG00000022796) #19	COG2 (ENSFCAG00000013537) #20	AGT (ENSFCAG00000028422) #21	CAPN9 (ENSFCAG00000013542) #22	C1orf198 (ENSFCAG00000042580) #23	TTC13 (ENSFCAG00000023459) #24	ARV1 (ENSFCAG00000042548) #25	FAM89A (ENSFCAG00000040894) #26	TRIM67 (ENSFCAG00000046682) #27	CD2H1orf131 (ENSFCAG00000005295) #28	GNPAT (ENSFCAG00000005296) #29	EXOC8 (ENSFCAG00000025577) #30	SPRTN (ENSFCAG00000029939) #31	EGLN1 (ENSFCAG00000023997) #32	TSNAX (ENSFCAG00000028088) #33	DISC1 (ENSFCAG00000002499) #34	SIPA1L2 (ENSFCAG00000007249) #35	MAP10 (ENSFCAG00000043757) #36	NTPCR (ENSFCAG00000014211) #37
Laurasiatheria_c	ANCESTRAL SPECIES	25				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512.i.b #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Equus	ANCESTRAL SPECIES	58																ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Horse	MODERN SPECIES		SLC18A3 (ENSECAG00000031922)	CHAT (ENSECAG00000021611)	C1H10orf53 (ENSECAG00000021332)	OGDHL (ENSECAG00000002917)	PARG (ENSECAG00000022081)	ENSECAG00000029528	TIMM23 (ENSECAG00000015850)	NCOA4 (ENSECAG00000006210)	MSMB (ENSECAG00000022328)	ENSECAG00000011080	ZFAND4 (ENSECAG00000007820)	MARCHF8 (ENSECAG00000002745)	ALOX5 (ENSECAG00000012930)	ENSECAG00000030826	OR6D22 (ENSECAG00000037757)	CAPN9 (ENSECAG00000014703) #22	C1H1orf198 (ENSECAG00000013108) #23	TTC13 (ENSECAG00000019247) #24	ARV1 (ENSECAG00000016519) #25	FAM89A (ENSECAG00000016510) #26	TRIM67 (ENSECAG00000007269) #27	C1H1orf131 (ENSECAG00000024809) #28	GNPAT (ENSECAG00000005906) #29	EXOC8 (ENSECAG00000003363) #30	SPRTN (ENSECAG00000023916) #31	EGLN1 (ENSECAG00000021704) #32	TSNAX (ENSECAG00000045739) #33	DISC1 (ENSECAG00000001262) #34	SIPA1L2 (ENSECAG00000008162) #35	MAP10 (ENSECAG00000007746) #36	NTPCR (ENSECAG00000023376) #37
Donkey	MODERN SPECIES	11	ERCC6 (ENSEASG00005019403)	SLC18A3 (ENSEASG00005019399)	CHAT (ENSEASG00005019389)	C10orf53 (ENSEASG00005019384)	OGDHL (ENSEASG00005019379)	PARG (ENSEASG00005019278)	ENSEASG00005033401	ENSEASG00005019256	ENSEASG00005019260	ENSEASG00005019254	ENSEASG00005026107	ENSEASG00005019248	ENSEASG00005019241	ENSEASG00005028993	ENSEASG00005019229	ENSEASG00005012989 #22	C1orf198 (ENSEASG00005012988) #23	TTC13 (ENSEASG00005012984) #24	ARV1 (ENSEASG00005012980) #25	ENSEASG00005031231 #26	TRIM67 (ENSEASG00005012970) #27	C1orf131 (ENSEASG00005012965) #28	GNPAT (ENSEASG00005012843) #29	EXOC8 (ENSEASG00005012837) #30	SPRTN (ENSEASG00005030428) #31	EGLN1 (ENSEASG00005025099) #32	TSNAX (ENSEASG00005012828) #33	DISC1 (ENSEASG00005012822) #34	SIPA1L2 (ENSEASG00005012815) #35	MAP10 (ENSEASG00005012809) #36	NTPCR (ENSEASG00005012806) #37
Chiroptera	ANCESTRAL SPECIES	30			ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512.j #12	ENSGT00390000003512.i.b #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Microchiroptera	ANCESTRAL SPECIES	32				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512.i.b #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Greater horseshoe bat	MODERN SPECIES	19				RHOU (ENSRFEG00010013966) #10	RAB4A (ENSRFEG00010013839) #11	CCSAP (ENSRFEG00010013767) #12	ACTA1 (ENSRFEG00010013727) #13	NUP133 (ENSRFEG00010013619) #14	ABCB10 (ENSRFEG00010013538) #15	TAF5L (ENSRFEG00010022146) #16	URB2 (ENSRFEG00010022145) #17	GALNT2 (ENSRFEG00010022144) #18	PGBD5 (ENSRFEG00010022143) #19	COG2 (ENSRFEG00010022141) #20	AGT (ENSRFEG00010022140) #21	CAPN9 (ENSRFEG00010022139) #22	C1orf198 (ENSRFEG00010022137) #23	TTC13 (ENSRFEG00010022131) #24	ARV1 (ENSRFEG00010022125) #25	FAM89A (ENSRFEG00010022123) #26	TRIM67 (ENSRFEG00010022119) #27	C1orf131 (ENSRFEG00010022117) #28	GNPAT (ENSRFEG00010022113) #29	EXOC8 (ENSRFEG00010022110) #30	SPRTN (ENSRFEG00010022109) #31	EGLN1 (ENSRFEG00010022106) #32	TSNAX (ENSRFEG00010022105) #33	ENSRFEG00010022102 #34	ENSRFEG00010022098 #34	SIPA1L2 (ENSRFEG00010022092) #35	MAP10 (ENSRFEG00010022089) #36
Atlantogenata	ANCESTRAL SPECIES	44				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Xenarthra	ANCESTRAL SPECIES	1725																ENSGT00940000158966 #22	ENSGT00390000018361 #23
Armadillo	MODERN SPECIES	565											ENSDNOG00000048280	PDE4DIP (ENSDNOG00000017545)	SEC22B (ENSDNOG00000033611)	NOTCH2 (ENSDNOG00000010476)	ADAM30 (ENSDNOG00000010206)	CAPN9 (ENSDNOG00000048702) #22	C1orf198 (ENSDNOG00000038164) #23
Afrotheria	ANCESTRAL SPECIES	47												ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Afrotheria_a	ANCESTRAL SPECIES	48												ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00390000015936 #30	ENSGT00390000003585 #31	ENSGT00940000155704 #32	ENSGT00940000153568.A #33	ENSGT00390000006176 #34	ENSGT00940000157388 #35	ENSGT00390000008459 #36	ENSGT00390000018683 #37
Elephant	MODERN SPECIES	126	RC3H1 (ENSLAFG00000004367)	SERPINC1 (ENSLAFG00000004365)	ZBTB37 (ENSLAFG00000004363)	DARS2 (ENSLAFG00000008719)	CENPL (ENSLAFG00000022897)	KLHL20 (ENSLAFG00000016642)	ANKRD45 (ENSLAFG00000008971)	SLC9C2 (ENSLAFG00000002283)	PRDX6 (ENSLAFG00000030535)	ENSLAFG00000005005	ENSLAFG00000013711	GALNT2 (ENSLAFG00000004298) #18	PGBD5 (ENSLAFG00000025744) #19	COG2 (ENSLAFG00000002100) #20	AGT (ENSLAFG00000032759) #21	CAPN9 (ENSLAFG00000003437) #22	ENSLAFG00000011797 #23	TTC13 (ENSLAFG00000011799) #24	ARV1 (ENSLAFG00000011807) #25	FAM89A (ENSLAFG00000023173) #26	TRIM67 (ENSLAFG00000018157) #27	C1orf131 (ENSLAFG00000018164) #28	GNPAT (ENSLAFG00000025932) #29	SPRTN (ENSLAFG00000022053) #31	EGLN1 (ENSLAFG00000027305) #32	ENSLAFG00000026586	TSNAX (ENSLAFG00000006692) #33	ENSLAFG00000026718 #34	SIPA1L2 (ENSLAFG00000002420) #35	MAP10 (ENSLAFG00000020699) #36	NTPCR (ENSLAFG00000022724) #37
Hyrax	MODERN SPECIES	2563																CAPN9 (ENSPCAG00000008786) #22
Tenrec	MODERN SPECIES	3148																CAPN9 (ENSETEG00000008057) #22
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000154757	ENSGT01030000234540.A.a.a	ENSGT01030000234540.B.a.a.a.a	ENSGT01030000234540.B.a.a.a.b.b.a.a.a	ENSGT01030000234540.B.a.a.a.b.b.a.a.b	ENSGT01030000234540.B.a.a.a.b.a.b.b	ENSGT00390000012496.b.b	ENSGT00940000162622
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000154757	ENSGT01030000234540.A.a.a	ENSGT01030000234540.B.a.a.a.a	ENSGT01030000234540.B.a.a.a.b.b.a.a.a	ENSGT01030000234540.B.a.a.a.b.b.a.a.b	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.B.a.a.a.b.a.b.b	ENSGT00390000012496.b.b
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.b #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1035	ENSVURG00010001158 #32	ENSVURG00010001145 #31	ENSVURG00010001136 #30	ENSVURG00010001094 #10	ENSVURG00010001008 #11	ENSVURG00010000915 #12	ENSVURG00010000907 #13	ENSVURG00010000878 #14	ENSVURG00010000808 #15	ENSVURG00010000679 #16	ENSVURG00010000656 #17	ENSVURG00010000569 #18	ENSVURG00010000409 #19	ENSVURG00010000343 #20	ENSVURG00010000313 #21	ENSVURG00010000299 #22	ENSVURG00010000283 #23	ENSVURG00010000279	ENSVURG00010000274	ENSVURG00010000259	ENSVURG00010000212	ENSVURG00010000197	ENSVURG00010000190	ENSVURG00010000159	ENSVURG00010000120	ENSVURG00010017193	ENSVURG00010017182	ENSVURG00010017176	ENSVURG00010017170	ENSVURG00010017162	ENSVURG00010017153
Common wonbat	MODERN SPECIES	1035	ENSVURG00010001360 #32	ENSVURG00010001351 #31	ENSVURG00010001343 #30	ENSVURG00010001329 #10	ENSVURG00010001261 #11	ENSVURG00010001247 #12	ENSVURG00010001203 #13	ENSVURG00010001159 #14	ENSVURG00010001074 #15	ENSVURG00010001053 #16	ENSVURG00010001033 #17	ENSVURG00010000987 #18	ENSVURG00010000858 #19	ENSVURG00010000701 #20	ENSVURG00010000684 #21	ENSVURG00010000634 #22	ENSVURG00010000612 #23	ENSVURG00010000606	ENSVURG00010000577	ENSVURG00010000564	ENSVURG00010000452	ENSVURG00010000428	ENSVURG00010000419	ENSVURG00010000406	ENSVURG00010022655	ENSVURG00010022651	ENSVURG00010022648	ENSVURG00010022643	ENSVURG00010022639	ENSVURG00010022636	ENSVURG00010022633
koala	MODERN SPECIES	83	ENSPCIG00000018085 #31	EXOC8 (ENSPCIG00000018084) #30	RHOU (ENSPCIG00000031680) #10	ENSPCIG00000034361	RAB4A (ENSPCIG00000030059) #11	ENSPCIG00000030060 #12	ENSPCIG00000004718 #13	NUP133 (ENSPCIG00000030064) #14	ABCB10 (ENSPCIG00000030067) #15	TAF5L (ENSPCIG00000030070) #16	URB2 (ENSPCIG00000030071) #17	GALNT2 (ENSPCIG00000011616) #18	PGBD5 (ENSPCIG00000011610) #19	COG2 (ENSPCIG00000011602) #20	AGT (ENSPCIG00000011600) #21	CAPN9 (ENSPCIG00000011598) #22	C1orf198 (ENSPCIG00000011595) #23	TTC13 (ENSPCIG00000011589) #24	ARV1 (ENSPCIG00000011587) #25	FAM89A (ENSPCIG00000011586) #26	TRIM67 (ENSPCIG00000011584) #27	ENSPCIG00000011580 #28	ENSPCIG00000033720
Wallaby	MODERN SPECIES	4169																CAPN9 (ENSMEUG00000011245) #22
Tasmanian devil	MODERN SPECIES	3	EXOC8 (ENSSHAG00000008461) #30	SPRTN (ENSSHAG00000027841) #31	ENSSHAG00000026649 #10	RAB4A (ENSSHAG00000013330) #11	CCSAP (ENSSHAG00000030649) #12	ACTA1 (ENSSHAG00000014035) #13	NUP133 (ENSSHAG00000014103) #14	ABCB10 (ENSSHAG00000014361) #15	TAF5L (ENSSHAG00000027933) #16	URB2 (ENSSHAG00000014735) #17	GALNT2 (ENSSHAG00000016444) #18	PGBD5 (ENSSHAG00000017012) #19	ENSSHAG00000031457	COG2 (ENSSHAG00000017545) #20	ENSSHAG00000017653 #21	CAPN9 (ENSSHAG00000017756) #22	C1orf198 (ENSSHAG00000024774) #23	TTC13 (ENSSHAG00000018045) #24	ARV1 (ENSSHAG00000018143) #25	FAM89A (ENSSHAG00000024499) #26	TRIM67 (ENSSHAG00000031796) #27	C1orf131 (ENSSHAG00000029862) #28	ENSSHAG00000018451 #29	ENSSHAG00000003198	ENSSHAG00000005337	ENSSHAG00000005862	ENSSHAG00000029961	ENSSHAG00000002637	ENSSHAG00000004544	VANGL2 (ENSSHAG00000005676)	NHLH1 (ENSSHAG00000026357)
Opossum	MODERN SPECIES	1	TSNAX (ENSMODG00000047031) #33	ENSMODG00000027858	EGLN1 (ENSMODG00000008825) #32	ENSMODG00000049042 #31	RHOU (ENSMODG00000008848) #10	ENSMODG00000041242	RAB4A (ENSMODG00000043207) #11	ENSMODG00000008872 #12	ACTA1 (ENSMODG00000008918) #13	NUP133 (ENSMODG00000008963) #14	ABCB10 (ENSMODG00000009056) #15	GALNT2 (ENSMODG00000009155) #18	PGBD5 (ENSMODG00000009166) #19	COG2 (ENSMODG00000009191) #20	AGT (ENSMODG00000009201) #21	CAPN9 (ENSMODG00000009241) #22	C1orf198 (ENSMODG00000051269) #23	TTC13 (ENSMODG00000009317) #24	ENSMODG00000009323 #25	FAM89A (ENSMODG00000037411) #26	TRIM67 (ENSMODG00000009344) #27	C1orf131 (ENSMODG00000009357) #28	GNPAT (ENSMODG00000009375) #29	ENSMODG00000025665	ENSMODG00000009384	ENSMODG00000025666	ENSMODG00000050946	ENSMODG00000049937	ENSMODG00000028202	ENSMODG00000009405	ENSMODG00000009452
Platypus	MODERN SPECIES	10	ENSOANG00000013722 #32	ENSOANG00000048013 #31	EXOC8 (ENSOANG00000048589) #30	RHOU (ENSOANG00000045167) #10	RAB4A (ENSOANG00000041440) #11	ENSOANG00000001828 #12	ENSOANG00000012845 ##13	NUP133 (ENSOANG00000013726) #14	ABCB10 (ENSOANG00000013729) #15	TAF5L (ENSOANG00000043138) #16	URB2 (ENSOANG00000049808) #17	ENSOANG00000013733 #18	ENSOANG00000013735 #19	COG2 (ENSOANG00000013736) #20	ENSOANG00000013737 #21	CAPN9 (ENSOANG00000013738) #22	C1orf198 (ENSOANG00000050646) #23	ENSOANG00000036019 #24	ENSOANG00000042439	ARV1 (ENSOANG00000013740) #25	FAM89A (ENSOANG00000050678) #26	TRIM67 (ENSOANG00000001376) #27	ENSOANG00000048708 #28	GNPAT (ENSOANG00000048051) #29	PDCD2 (ENSOANG00000051070)	TBP (ENSOANG00000012858)	PSMB1 (ENSOANG00000039239)	ENSOANG00000013741	DLL1 (ENSOANG00000015029)
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Aves	ANCESTRAL SPECIES	12	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Kakapo	MODERN SPECIES	2	EGLN1 (ENSSHBG00005006781) #32	SPRTN (ENSSHBG00005006772) #31	EXOC8 (ENSSHBG00005006766) #30	RHOU (ENSSHBG00005006757) #10	RAB4A (ENSSHBG00005006748) #11	CCSAP (ENSSHBG00005006739) #12	ACTA1 (ENSSHBG00005006730) #13	NUP133 (ENSSHBG00005006692) #14	ABCB10 (ENSSHBG00005006610) #15	TAF5L (ENSSHBG00005006599) #16	URB2 (ENSSHBG00005006576) #17	GALNT2 (ENSSHBG00005006139) #18	PGBD5 (ENSSHBG00005006041) #19	COG2 (ENSSHBG00005006026) #20	AGT (ENSSHBG00005006013) #21	CAPN9 (ENSSHBG00005005912) #22	C1orf198 (ENSSHBG00005005854) #23	TTC13 (ENSSHBG00005005473) #24	ARV1 (ENSSHBG00005000690) #25	ENSSHBG00005021003	FAM89A (ENSSHBG00005020997) #26	TRIM67 (ENSSHBG00005020994) #27	C1orf131 (ENSSHBG00005020987) #28	GNPAT (ENSSHBG00005020976) #29	PDCD2 (ENSSHBG00005020971)	TBP (ENSSHBG00005020965)	PSMB1 (ENSSHBG00005020961)	FAM120B (ENSSHBG00005020954)	DLL1 (ENSSHBG00005020945)	ERMARD (ENSSHBG00005020915)	DYNLT2 (ENSSHBG00005020889)
Golden eagle	MODERN SPECIES	4	EGLN1 (ENSACCG00020004894) #32	SPRTN (ENSACCG00020004901) #31	EXOC8 (ENSACCG00020004907) #30	RHOU (ENSACCG00020004913) #10	RAB4A (ENSACCG00020004923) #11	CCSAP (ENSACCG00020004938) #12	ACTA1 (ENSACCG00020004955) #13	NUP133 (ENSACCG00020004972) #14	ABCB10 (ENSACCG00020005030) #15	TAF5L (ENSACCG00020005077) #16	URB2 (ENSACCG00020005083) #17	GALNT2 (ENSACCG00020005093) #18	PGBD5 (ENSACCG00020005107) #19	COG2 (ENSACCG00020005116) #20	AGT (ENSACCG00020005129) #21	CAPN9 (ENSACCG00020005174) #22	C1orf198 (ENSACCG00020005193) #23	TTC13 (ENSACCG00020005205) #24	ARV1 (ENSACCG00020005222) #25	FAM89A (ENSACCG00020005233) #26	TRIM67 (ENSACCG00020005243) #27	C1orf131 (ENSACCG00020005252) #28	GNPAT (ENSACCG00020005263) #29	PDCD2 (ENSACCG00020005273)	TBP (ENSACCG00020005281)	PSMB1 (ENSACCG00020005287)	FAM120B (ENSACCG00020005298)	DLL1 (ENSACCG00020005311)	ERMARD (ENSACCG00020005325)	DYNLT2 (ENSACCG00020005347)	PHF10 (ENSACCG00020005364)
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Great tit	MODERN SPECIES	22	EGLN1 (ENSPMJG00000003376) #32	SPRTN (ENSPMJG00000003262) #31	EXOC8 (ENSPMJG00000003259) #30	RHOU (ENSPMJG00000003254) #10	RAB4A (ENSPMJG00000003001) #11	CCSAP (ENSPMJG00000002995) #12	ENSPMJG00000002976	NUP133 (ENSPMJG00000002947) #14	ABCB10 (ENSPMJG00000002935) #15	TAF5L (ENSPMJG00000002929) #16	URB2 (ENSPMJG00000002917) #17	GALNT2 (ENSPMJG00000002730) #18	PGBD5 (ENSPMJG00000002725) #19	COG2 (ENSPMJG00000002641) #20	AGT (ENSPMJG00000002626) #21	CAPN9 (ENSPMJG00000002587) #22	C1orf198 (ENSPMJG00000002583) #23	TTC13 (ENSPMJG00000002574) #24	ARV1 (ENSPMJG00000002573) #25	FAM89A (ENSPMJG00000002513) #26	TRIM67 (ENSPMJG00000002472) #27	C1orf131 (ENSPMJG00000002346) #28	GNPAT (ENSPMJG00000002331) #29	PDCD2 (ENSPMJG00000002322)	TBP (ENSPMJG00000002308)	PSMB1 (ENSPMJG00000002299)	FAM120B (ENSPMJG00000002245)	DLL1 (ENSPMJG00000002216)	ERMARD (ENSPMJG00000002159)	DYNLT2 (ENSPMJG00000002151)	PHF10 (ENSPMJG00000002137)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00980000199980	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00980000199980	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Medium ground finch	MODERN SPECIES	51	TSNAX (ENSGFOG00000011436) #33	EGLN1 (ENSGFOG00000011451) #32	SPRTN (ENSGFOG00000011460) #31	RHOU (ENSGFOG00000011487) #10	RAB4A (ENSGFOG00000011494) #11	CCSAP (ENSGFOG00000011501) #12	ENSGFOG00000011505	NUP133 (ENSGFOG00000011532) #14	ABCB10 (ENSGFOG00000011636) #15	TAF5L (ENSGFOG00000011650) #16	URB2 (ENSGFOG00000011653) #17	GALNT2 (ENSGFOG00000011675) #18	PGBD5 (ENSGFOG00000011712) #19	COG2 (ENSGFOG00000011714) #20	AGT (ENSGFOG00000011725) #21	CAPN9 (ENSGFOG00000011731) #22	C1orf198 (ENSGFOG00000011748) #23	TTC13 (ENSGFOG00000011752) #24	ARV1 (ENSGFOG00000011762) #25	TRIM67 (ENSGFOG00000011771) #27	ENSGFOG00000011808	GNPAT (ENSGFOG00000011817) #29	TBP (ENSGFOG00000011882)	PSMB1 (ENSGFOG00000011889)	FAM120B (ENSGFOG00000011899)	DLL1 (ENSGFOG00000011907)	ERMARD (ENSGFOG00000011912)	PHF10 (ENSGFOG00000011920)	C6orf120 (ENSGFOG00000011922)	WDR27 (ENSGFOG00000011924)
Passeroidea	ANCESTRAL SPECIES		ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00980000199980	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Zebra finch	MODERN SPECIES	23	EGLN1 (ENSTGUG00000010081) #32	SPRTN (ENSTGUG00000010080) #31	EXOC8 (ENSTGUG00000018403) #30	RHOU (ENSTGUG00000025893) #10	RAB4A (ENSTGUG00000010060) #11	CCSAP (ENSTGUG00000024847) #12	ACTA1 (ENSTGUG00000010041) #13	NUP133 (ENSTGUG00000010013) #14	ABCB10 (ENSTGUG00000010005) #15	TAF5L (ENSTGUG00000010002) #16	URB2 (ENSTGUG00000009990) #17	GALNT2 (ENSTGUG00000009986) #18	PGBD5 (ENSTGUG00000026218) #19	COG2 (ENSTGUG00000009965) #20	AGT (ENSTGUG00000009957) #21	CAPN9 (ENSTGUG00000009921) #22	C1orf198 (ENSTGUG00000009919) #23	TTC13 (ENSTGUG00000009894) #24	ARV1 (ENSTGUG00000018916) #25	FAM89A (ENSTGUG00000018841) #26	TRIM67 (ENSTGUG00000009874) #27	C1orf131 (ENSTGUG00000023787) #28	GNPAT (ENSTGUG00000009841) #29	ENSTGUG00000019043	TBP (ENSTGUG00000009824)	PSMB1 (ENSTGUG00000027366)	FAM120B (ENSTGUG00000009796)	DLL1 (ENSTGUG00000009780)	ERMARD (ENSTGUG00000009754)	DYNLT2 (ENSTGUG00000009751)	PHF10 (ENSTGUG00000009739)
Common canary	MODERN SPECIES	20	EGLN1 (ENSSCAG00000003612) #32	SPRTN (ENSSCAG00000003609) #31	EXOC8 (ENSSCAG00000003604) #30	RHOU (ENSSCAG00000003603) #10	RAB4A (ENSSCAG00000003592) #11	CCSAP (ENSSCAG00000003583) #12	ACTA1 (ENSSCAG00000003577) #13	NUP133 (ENSSCAG00000003570) #14	ABCB10 (ENSSCAG00000003526) #15	TAF5L (ENSSCAG00000003512) #16	URB2 (ENSSCAG00000003503) #17	GALNT2 (ENSSCAG00000003495) #18	PGBD5 (ENSSCAG00000003488) #19	COG2 (ENSSCAG00000003481) #20	AGT (ENSSCAG00000003477) #21	CAPN9 (ENSSCAG00000003453) #22	ENSSCAG00000003439	ARV1 (ENSSCAG00000003435) #25	TTC13 (ENSSCAG00000003423) #24	FAM89A (ENSSCAG00000003405) #26	ENSSCAG00000003399	GNPAT (ENSSCAG00000003382) #29	TBP (ENSSCAG00000003367)	PSMB1 (ENSSCAG00000003360)	FAM120B (ENSSCAG00000003344)	DLL1 (ENSSCAG00000003330)	ERMARD (ENSSCAG00000003316)	PHF10 (ENSSCAG00000003311)	C6orf120 (ENSSCAG00000003309)	WDR27 (ENSSCAG00000003303)	THBS2 (ENSSCAG00000003295)
Flycatcher	MODERN SPECIES	21	ENSFALG00000028954 #32	SPRTN (ENSFALG00000027582) #31	EXOC8 (ENSFALG00000023834) #30	RHOU (ENSFALG00000003307) #10	RAB4A (ENSFALG00000003324) #11	CCSAP (ENSFALG00000028974) #12	ENSFALG00000003346	NUP133 (ENSFALG00000003361) #14	ABCB10 (ENSFALG00000003373) #15	TAF5L (ENSFALG00000003380) #16	URB2 (ENSFALG00000003385) #17	GALNT2 (ENSFALG00000003388) #18	PGBD5 (ENSFALG00000003393) #19	COG2 (ENSFALG00000003401) #20	AGT (ENSFALG00000003410) #21	CAPN9 (ENSFALG00000003442) #22	ENSFALG00000003505	TTC13 (ENSFALG00000003508) #24	ARV1 (ENSFALG00000026502) #25	TRIM67 (ENSFALG00000008932) #27	C1orf131 (ENSFALG00000003288) #28	GNPAT (ENSFALG00000003278) #29	TBP (ENSFALG00000026153)	PSMB1 (ENSFALG00000003223)	FAM120B (ENSFALG00000003208)	DLL1 (ENSFALG00000003196)	ERMARD (ENSFALG00000003184)	PHF10 (ENSFALG00000003154)	C6orf120 (ENSFALG00000015337)	WDR27 (ENSFALG00000003136)	THBS2 (ENSFALG00000003079)
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Anatidae	ANCESTRAL SPECIES															ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Pink-footed goose	MODERN SPECIES	352														COG2 (ENSABRG00000020510) #20	AGT (ENSABRG00000020529) #21	CAPN9 (ENSABRG00000020552) #22	C1orf198 (ENSABRG00000020624) #23	TTC13 (ENSABRG00000020626) #24	ARV1 (ENSABRG00000020631) #25	FAM89A (ENSABRG00000020642) #26	TRIM67 (ENSABRG00000020645) #27	C1orf131 (ENSABRG00000020647) #28	GNPAT (ENSABRG00000020649) #29	PDCD2 (ENSABRG00000020655)	ENSABRG00000020657	TBP (ENSABRG00000020658)	PSMB1 (ENSABRG00000020661)
Duck	MODERN SPECIES	21	EXO1 (ENSAPLG00000015042)	OPN3 (ENSAPLG00000014871)	PIGM (ENSAPLG00000028189)	RGS7 (ENSAPLG00000014655)	GREM2 (ENSAPLG00000001754)	FMN2 (ENSAPLG00000014536)	CHRM3 (ENSAPLG00000014510)	ENSAPLG00000019479	RYR2 (ENSAPLG00000011026)	MTR (ENSAPLG00000009934)	ACTN2 (ENSAPLG00000008618)	HEATR1 (ENSAPLG00000008015)	LGALS8 (ENSAPLG00000007822)	ENSAPLG00000023427	AGT (ENSAPLG00000015860) #21	CAPN9 (ENSAPLG00000014110) #22	C1orf198 (ENSAPLG00000013985) #23	TTC13 (ENSAPLG00000013644) #24	ARV1 (ENSAPLG00000013578) #25	ENSAPLG00000001159	TRIM67 (ENSAPLG00000029381) #27	ENSAPLG00000016580	GNPAT (ENSAPLG00000013047) #29	PDCD2 (ENSAPLG00000021270)	ENSAPLG00000018224	TBP (ENSAPLG00000012687)	PSMB1 (ENSAPLG00000012435)	FAM120B (ENSAPLG00000012280)	DLL1 (ENSAPLG00000011635)	ERMARD (ENSAPLG00000010834)	DYNLT2 (ENSAPLG00000026410)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Japanese quail	MODERN SPECIES	21	EGLN1 (ENSCJPG00005003824) #32	SPRTN (ENSCJPG00005003825) #31	EXOC8 (ENSCJPG00005003826) #30	RHOU (ENSCJPG00005003827) #10	RAB4A (ENSCJPG00005003831) #11	CCSAP (ENSCJPG00005003838) #12	ENSCJPG00005003839	NUP133 (ENSCJPG00005003844) #14	ABCB10 (ENSCJPG00005003845) #15	TAF5L (ENSCJPG00005003864) #16	URB2 (ENSCJPG00005003865) #17	GALNT2 (ENSCJPG00005003872) #18	PGBD5 (ENSCJPG00005003876) #19	COG2 (ENSCJPG00005003881) #20	AGT (ENSCJPG00005003884) #21	CAPN9 (ENSCJPG00005003888) #22	C1orf198 (ENSCJPG00005003891) #23	TTC13 (ENSCJPG00005003902) #24	ARV1 (ENSCJPG00005003903) #25	FAM89A (ENSCJPG00005003904) #26	TRIM67 (ENSCJPG00005003905) #27	C1orf131 (ENSCJPG00005003906) #28	GNPAT (ENSCJPG00005003907) #29	ENSCJPG00005003909	TBP (ENSCJPG00005003910)	PSMB1 (ENSCJPG00005003911)	FAM120B (ENSCJPG00005003912)	DLL1 (ENSCJPG00005003913)	ENSCJPG00005003916	ERMARD (ENSCJPG00005003920)	DYNLT2 (ENSCJPG00005003922)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Chicken	MODERN SPECIES	22	EGLN1 (ENSGALG00010007965) #32	SPRTN (ENSGALG00010007970) #31	EXOC8 (ENSGALG00010007972) #30	RHOU (ENSGALG00010006885) #10	RAB4A (ENSGALG00010010263) #11	CCSAP (ENSGALG00010010279) #12	ENSGALG00010010295	NUP133 (ENSGALG00010010321) #14	ABCB10 (ENSGALG00010009554) #15	TAF5L (ENSGALG00010009522) #16	URB2 (ENSGALG00010009596) #17	GALNT2 (ENSGALG00010009647) #18	PGBD5 (ENSGALG00010006966) #19	COG2 (ENSGALG00010007730) #20	AGT (ENSGALG00010007759) #21	CAPN9 (ENSGALG00010007771) #22	C1orf198 (ENSGALG00010007787) #23	TTC13 (ENSGALG00010007801) #24	ARV1 (ENSGALG00010007809) #25	FAM89A (ENSGALG00010007821) #26	TRIM67 (ENSGALG00010007841) #27	C1orf131 (ENSGALG00010007853) #28	GNPAT (ENSGALG00010010888) #29	PDCD2 (ENSGALG00010007856)	TBP (ENSGALG00010007866)	PSMB1 (ENSGALG00010007878)	FAM120B (ENSGALG00010007921)	DLL1 (ENSGALG00010007927)	ENSGALG00010004387	ERMARD (ENSGALG00010004542)	DYNLT2 (ENSGALG00010004602)
Turkey	MODERN SPECIES	11	TSNAX (ENSMGAG00000011981) #33	EGLN1 (ENSMGAG00000011991) #32	SPRTN (ENSMGAG00000011993) #31	EXOC8 (ENSMGAG00000011998) #30	RHOU (ENSMGAG00000021360) #10	RAB4A (ENSMGAG00000012003) #11	ACTA1 (ENSMGAG00000012010) #13	NUP133 (ENSMGAG00000012061) #14	ABCB10 (ENSMGAG00000012066) #15	TAF5L (ENSMGAG00000012068) #16	URB2 (ENSMGAG00000012073) #17	GALNT2 (ENSMGAG00000012078) #18	PGBD5 (ENSMGAG00000012085) #19	COG2 (ENSMGAG00000012088) #20	AGT (ENSMGAG00000012097) #21	CAPN9 (ENSMGAG00000012108) #22	ENSMGAG00000012142	TTC13 (ENSMGAG00000012145) #24	ARV1 (ENSMGAG00000012151) #25	TRIM67 (ENSMGAG00000012157) #27	C1orf131 (ENSMGAG00000012161) #28	GNPAT (ENSMGAG00000012163) #29	TBP (ENSMGAG00000012179)	PSMB1 (ENSMGAG00000012188)	FAM120B (ENSMGAG00000012195)	DLL1 (ENSMGAG00000012198)	ERMARD (ENSMGAG00000012202)	DYNLT2 (ENSMGAG00000012210)	PHF10 (ENSMGAG00000012212)	C6orf120 (ENSMGAG00000015838)	WDR27 (ENSMGAG00000012219)
African ostrich	MODERN SPECIES	188	TSNAX (ENSSCUG00000000411) #33	EGLN1 (ENSSCUG00000000408) #32	SPRTN (ENSSCUG00000000401) #31	EXOC8 (ENSSCUG00000000390) #30	RHOU (ENSSCUG00000000383) #10	RAB4A (ENSSCUG00000000374) #11	ENSSCUG00000000371	NUP133 (ENSSCUG00000000362) #14	ABCB10 (ENSSCUG00000000359) #15	TAF5L (ENSSCUG00000000356) #16	URB2 (ENSSCUG00000000353) #17	GALNT2 (ENSSCUG00000000348) #18	PGBD5 (ENSSCUG00000000342) #19	COG2 (ENSSCUG00000000336) #20	AGT (ENSSCUG00000000335) #21	CAPN9 (ENSSCUG00000000321) #22	ENSSCUG00000000315	TTC13 (ENSSCUG00000000314) #24	ARV1 (ENSSCUG00000000310) #25	TRIM67 (ENSSCUG00000000305) #27	GNPAT (ENSSCUG00000000299) #29	PDCD2 (ENSSCUG00000000295)	TBP (ENSSCUG00000003219)	PSMB1 (ENSSCUG00000003218)	FAM120B (ENSSCUG00000003215)	DLL1 (ENSSCUG00000003210)	ERMARD (ENSSCUG00000003206)	DYNLT2 (ENSSCUG00000003205)	PHF10 (ENSSCUG00000003202)	C6orf120 (ENSSCUG00000003201)	WDR27 (ENSSCUG00000003196)
Australian saltwater crocodile	MODERN SPECIES	60	SPRTN (ENSCPRG00005017153) #31	EXOC8 (ENSCPRG00005017156) #30	RHOU (ENSCPRG00005017157) #10	RAB4A (ENSCPRG00005017164) #11	CCSAP (ENSCPRG00005017169) #12	ENSCPRG00005017170	ENSCPRG00005017173	NUP133 (ENSCPRG00005017179) #14	ABCB10 (ENSCPRG00005017194) #15	ENSCPRG00005017196 #16	URB2 (ENSCPRG00005017200) #17	GALNT2 (ENSCPRG00005017207) #18	PGBD5 (ENSCPRG00005017212) #19	COG2 (ENSCPRG00005017220) #20	AGT (ENSCPRG00005017225) #21	CAPN9 (ENSCPRG00005017237) #22	C1orf198 (ENSCPRG00005017294) #23	TTC13 (ENSCPRG00005017296) #24	ARV1 (ENSCPRG00005017300) #25	ENSCPRG00005017301 #26	TRIM67 (ENSCPRG00005017308) #27	C1orf131 (ENSCPRG00005017310) #28	GNPAT (ENSCPRG00005017312) #29	PDCD2 (ENSCPRG00005017315)	TBP (ENSCPRG00005017317)	PSMB1 (ENSCPRG00005017322)	FAM120B (ENSCPRG00005017335)	DLL1 (ENSCPRG00005017339)	ERMARD (ENSCPRG00005017351)	DYNLT2 (ENSCPRG00005017354)	PHF10 (ENSCPRG00005017355)
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001424.d	ENSGT00390000001024	ENSGT00940000160069
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00960000189367	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001424.d	ENSGT00390000001024	ENSGT00940000160069
Abingdon island giant tortoise	MODERN SPECIES	2358												GALNT2 (ENSCABG00000020292) #18	PGBD5 (ENSCABG00000020307) #19	COG2 (ENSCABG00000020309) #20	AGT (ENSCABG00000020310) #21	CAPN9 (ENSCABG00000020311) #22	ENSCABG00000020315	TTC13 (ENSCABG00000020327) #24	ARV1 (ENSCABG00000020431) #25	FAM89A (ENSCABG00000020432) #26	TRIM67 (ENSCABG00000020433) #27	C1orf131 (ENSCABG00000020434) #28	GNPAT (ENSCABG00000020437) #29	PDCD2 (ENSCABG00000020457)	ENSCABG00000020459
Goode s thornscrub tortoise	MODERN SPECIES	17	EGLN1 (ENSGEVG00005016318) #32	SPRTN (ENSGEVG00005016242) #31	EXOC8 (ENSGEVG00005016225) #30	RHOU (ENSGEVG00005016171) #10	RAB4A (ENSGEVG00005016142) #11	CCSAP (ENSGEVG00005016071) #12	ACTA1 (ENSGEVG00005016044) #13	NUP133 (ENSGEVG00005015997) #14	ABCB10 (ENSGEVG00005015968) #15	TAF5L (ENSGEVG00005015949) #16	URB2 (ENSGEVG00005015908) #17	GALNT2 (ENSGEVG00005015874) #18	PGBD5 (ENSGEVG00005015814) #19	COG2 (ENSGEVG00005015782) #20	AGT (ENSGEVG00005015733) #21	CAPN9 (ENSGEVG00005015439) #22	ENSGEVG00005015403	TTC13 (ENSGEVG00005015292) #24	ARV1 (ENSGEVG00005015247) #25	FAM89A (ENSGEVG00005015161) #26	TRIM67 (ENSGEVG00005014773) #27	C1orf131 (ENSGEVG00005014607) #28	GNPAT (ENSGEVG00005014525) #29	PDCD2 (ENSGEVG00005014496)	TBP (ENSGEVG00005014472)	ENSGEVG00005014378	FAM120B (ENSGEVG00005014356)	DLL1 (ENSGEVG00005014277)	ENSGEVG00005014258	ERMARD (ENSGEVG00005014123)	DYNLT2 (ENSGEVG00005013938)
Emydidae	ANCESTRAL SPECIES		ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001424.d.b	ENSGT00390000001024	ENSGT00940000160069
Three-toed box turtle	MODERN SPECIES	31	EXOC8 (ENSTMTG00000021077) #30	RHOU (ENSTMTG00000021083) #10	RAB4A (ENSTMTG00000021087) #11	CCSAP (ENSTMTG00000021097) #12	ENSTMTG00000021101	NUP133 (ENSTMTG00000021107) #14	ABCB10 (ENSTMTG00000021124) #15	TAF5L (ENSTMTG00000021135) #16	URB2 (ENSTMTG00000021138) #17	ENSTMTG00000021143	GALNT2 (ENSTMTG00000021148) #18	PGBD5 (ENSTMTG00000021159) #19	ENSTMTG00000021166	COG2 (ENSTMTG00000021172) #20	AGT (ENSTMTG00000021184) #21	CAPN9 (ENSTMTG00000021202) #22	TTC13 (ENSTMTG00000021331) #24	ARV1 (ENSTMTG00000021642) #25	FAM89A (ENSTMTG00000021650) #26	TRIM67 (ENSTMTG00000021654) #27	C1orf131 (ENSTMTG00000021663) #28	GNPAT (ENSTMTG00000021668) #29	PDCD2 (ENSTMTG00000021673)	TBP (ENSTMTG00000021675)	PSMB1 (ENSTMTG00000021679)	FAM120B (ENSTMTG00000021686)	DLL1 (ENSTMTG00000021694)	ENSTMTG00000021698	ERMARD (ENSTMTG00000021704)	DYNLT2 (ENSTMTG00000021714)	PHF10 (ENSTMTG00000021719)
painted turtle	MODERN SPECIES	726	EGLN1 (ENSCPBG00000006097) #32	SPRTN (ENSCPBG00000006103) #31	EXOC8 (ENSCPBG00000006105) #30	RHOU (ENSCPBG00000006110) #10	RAB4A (ENSCPBG00000006118) #11	CCSAP (ENSCPBG00000006125) #12	ACTA1 (ENSCPBG00000006129) #13	NUP133 (ENSCPBG00000006137) #14	ABCB10 (ENSCPBG00000006163) #15	TAF5L (ENSCPBG00000006180) #16	URB2 (ENSCPBG00000006191) #17	GALNT2 (ENSCPBG00000006200) #18	PGBD5 (ENSCPBG00000006210) #19	COG2 (ENSCPBG00000006214) #20	AGT (ENSCPBG00000006219) #21	ENSCPBG00000006230 #22	ENSCPBG00000006234	C1orf198 (ENSCPBG00000006239) #23	TTC13 (ENSCPBG00000006246) #24	ARV1 (ENSCPBG00000006267) #25	FAM89A (ENSCPBG00000006279) #26	TRIM67 (ENSCPBG00000006296) #27	C1orf131 (ENSCPBG00000006845) #28	GNPAT (ENSCPBG00000006858) #29	PDCD2 (ENSCPBG00000006873)	TBP (ENSCPBG00000006883)	PSMB1 (ENSCPBG00000006897)
Chinese turtle	MODERN SPECIES	999				ENSPSIG00000002883	RAB4A (ENSPSIG00000002866) #11	ACTA1 (ENSPSIG00000002854) #13	NUP133 (ENSPSIG00000002770) #14	ABCB10 (ENSPSIG00000002723) #15	TAF5L (ENSPSIG00000002719) #16	URB2 (ENSPSIG00000002690) #17	GALNT2 (ENSPSIG00000017962) #18	ENSPSIG00000017949	PGBD5 (ENSPSIG00000017942) #19	COG2 (ENSPSIG00000017463) #20	AGT (ENSPSIG00000017280) #21	CAPN9 (ENSPSIG00000016067) #22	C1orf198 (ENSPSIG00000016063) #23	TTC13 (ENSPSIG00000014859) #24	TRIM67 (ENSPSIG00000014556) #27	C1orf131 (ENSPSIG00000014437) #28	GNPAT (ENSPSIG00000013801) #29	PDCD2 (ENSPSIG00000013461)	TBP (ENSPSIG00000013104)	PSMB1 (ENSPSIG00000011467)	FAM120B (ENSPSIG00000010353)	DLL1 (ENSPSIG00000009844)	ERMARD (ENSPSIG00000008956)	PHF10 (ENSPSIG00000007518)	C6orf120 (ENSPSIG00000001898)	WDR27 (ENSPSIG00000006729)	ENSPSIG00000001896
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Episquamata	ANCESTRAL SPECIES		ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000175608	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069
Elapidae	ANCESTRAL SPECIES		ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024.d	ENSGT00390000001024.c	ENSGT00940000160069
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00940000155704.w #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024.d	ENSGT00390000001024.c	ENSGT00940000160069
Blue-lipped sea krait	MODERN SPECIES	2827																CAPN9 (ENSLLTG00000002053) #22	ENSLLTG00000002071
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00940000155704.w #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024.d	ENSGT00390000001024.c	ENSGT00940000160069
Mainland tiger snake	MODERN SPECIES	28	EGLN1 (ENSNSUG00000001483) #32	SPRTN (ENSNSUG00000001484) #31	EXOC8 (ENSNSUG00000001572) #30	RHOU (ENSNSUG00000001573) #10	RAB4A (ENSNSUG00000001576) #11	CCSAP (ENSNSUG00000001577) #12	ACTA1 (ENSNSUG00000001581) #13	NUP133 (ENSNSUG00000001621) #14	ABCB10 (ENSNSUG00000002768) #15	TAF5L (ENSNSUG00000002779) #16	URB2 (ENSNSUG00000002781) #17	GALNT2 (ENSNSUG00000002787) #18	PGBD5 (ENSNSUG00000002858) #19	COG2 (ENSNSUG00000002864) #20	AGT (ENSNSUG00000002882) #21	CAPN9 (ENSNSUG00000002885) #22	ENSNSUG00000002904	TTC13 (ENSNSUG00000002908) #24	ARV1 (ENSNSUG00000003907) #25	FAM89A (ENSNSUG00000003938) #26	TRIM67 (ENSNSUG00000003942) #27	C1orf131 (ENSNSUG00000003945) #28	ENSNSUG00000003947	ENSNSUG00000003950 #29	PDCD2 (ENSNSUG00000003951)	TBP (ENSNSUG00000003956)	PSMB1 (ENSNSUG00000004178)	FAM120B (ENSNSUG00000004180)	DLL1 (ENSNSUG00000004185)	ENSNSUG00000004190	ENSNSUG00000004192
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	26	SPRTN (ENSPTXG00000012427) #31	EXOC8 (ENSPTXG00000012425) #30	RHOU (ENSPTXG00000012416) #10	RAB4A (ENSPTXG00000012412) #11	CCSAP (ENSPTXG00000012403) #12	ENSPTXG00000012401	NUP133 (ENSPTXG00000012400) #14	ABCB10 (ENSPTXG00000012398) #15	TAF5L (ENSPTXG00000012397) #16	URB2 (ENSPTXG00000012396) #17	GALNT2 (ENSPTXG00000012394) #18	PGBD5 (ENSPTXG00000012393) #19	COG2 (ENSPTXG00000012389) #20	AGT (ENSPTXG00000012386) #21	ENSPTXG00000012382 #22	ENSPTXG00000012377 #22	C1orf198 (ENSPTXG00000012375) #23	TTC13 (ENSPTXG00000009683) #24	ARV1 (ENSPTXG00000009682) #25	FAM89A (ENSPTXG00000009681) #26	TRIM67 (ENSPTXG00000009680) #27	ENSPTXG00000009679	C1orf131 (ENSPTXG00000009677) #28	GNPAT (ENSPTXG00000009676) #29	PDCD2 (ENSPTXG00000009675)	TBP (ENSPTXG00000009674)	PSMB1 (ENSPTXG00000009673)	FAM120B (ENSPTXG00000009672)	DLL1 (ENSPTXG00000009670)	ENSPTXG00000009667	ENSPTXG00000009666
Eastern brown snake	MODERN SPECIES	26	EGLN1 (ENSPTXG00000012430) #32	SPRTN (ENSPTXG00000012427) #31	EXOC8 (ENSPTXG00000012425) #30	RHOU (ENSPTXG00000012416) #10	RAB4A (ENSPTXG00000012412) #11	CCSAP (ENSPTXG00000012403) #12	ENSPTXG00000012401	NUP133 (ENSPTXG00000012400) #14	ABCB10 (ENSPTXG00000012398) #15	TAF5L (ENSPTXG00000012397) #16	URB2 (ENSPTXG00000012396) #17	GALNT2 (ENSPTXG00000012394) #18	PGBD5 (ENSPTXG00000012393) #19	COG2 (ENSPTXG00000012389) #20	AGT (ENSPTXG00000012386) #21	ENSPTXG00000012382 #22	ENSPTXG00000012377 #22	C1orf198 (ENSPTXG00000012375) #23	TTC13 (ENSPTXG00000009683) #24	ARV1 (ENSPTXG00000009682) #25	FAM89A (ENSPTXG00000009681) #26	TRIM67 (ENSPTXG00000009680) #27	ENSPTXG00000009679	C1orf131 (ENSPTXG00000009677) #28	GNPAT (ENSPTXG00000009676) #29	PDCD2 (ENSPTXG00000009675)	TBP (ENSPTXG00000009674)	PSMB1 (ENSPTXG00000009673)	FAM120B (ENSPTXG00000009672)	DLL1 (ENSPTXG00000009670)	ENSPTXG00000009667
Indian cobra	MODERN SPECIES		EGLN1 (ENSNNAG00000005038) #32	SPRTN (ENSNNAG00000005056) #31	EXOC8 (ENSNNAG00000005085) #30	RHOU (ENSNNAG00000005092) #10	ENSNNAG00000005099 #11	ENSNNAG00000005119 #11	CCSAP (ENSNNAG00000005137) #12	ENSNNAG00000005145	NUP133 (ENSNNAG00000005232) #14	ABCB10 (ENSNNAG00000006207) #15	URB2 (ENSNNAG00000006293) #17	GALNT2 (ENSNNAG00000006314) #18	PGBD5 (ENSNNAG00000006371) #19	COG2 (ENSNNAG00000006428) #20	AGT (ENSNNAG00000006890) #21	CAPN9 (ENSNNAG00000006953) #22	C1orf198 (ENSNNAG00000007265) #23	TTC13 (ENSNNAG00000007279) #24	ARV1 (ENSNNAG00000007328) #25	FAM89A (ENSNNAG00000007353) #26	TRIM67 (ENSNNAG00000007374) #27	C1orf131 (ENSNNAG00000007418) #28	GNPAT (ENSNNAG00000007452) #29	PDCD2 (ENSNNAG00000007661)	TBP (ENSNNAG00000007696)	PSMB1 (ENSNNAG00000007781)	FAM120B (ENSNNAG00000007828)	DLL1 (ENSNNAG00000008035)	ERMARD (ENSNNAG00000008126)	DYNLT2 (ENSNNAG00000008184)	PHF10 (ENSNNAG00000008230)
Lizard	MODERN SPECIES		RHOU (ENSACAG00000002876) #10	ENSACAG00000043500	RAB4A (ENSACAG00000000744) #11	CCSAP (ENSACAG00000000822) #12	ENSACAG00000039244	ACTA1 (ENSACAG00000001104) #13	NUP133 (ENSACAG00000000896) #14	ABCB10 (ENSACAG00000001130) #15	TAF5L (ENSACAG00000001237) #16	URB2 (ENSACAG00000001285) #17	ENSACAG00000042493	GALNT2 (ENSACAG00000001377) #18	PGBD5 (ENSACAG00000001523) #19	ENSACAG00000001542 #20	AGT (ENSACAG00000001740) #21	CAPN9 (ENSACAG00000001768) #22	C1orf198 (ENSACAG00000042660) #23	TTC13 (ENSACAG00000002115) #24	ARV1 (ENSACAG00000002299) #25	ENSACAG00000036721	FAM89A (ENSACAG00000002315) #26	TRIM67 (ENSACAG00000002320) #27	C1orf131 (ENSACAG00000029153) #28	GNPAT (ENSACAG00000002405) #29	PDCD2 (ENSACAG00000002531)	ENSACAG00000035162	TBP (ENSACAG00000002576)	PSMB1 (ENSACAG00000002641)	FAM120B (ENSACAG00000002686)	DLL1 (ENSACAG00000002704)	ERMARD (ENSACAG00000002782)
Laterata	ANCESTRAL SPECIES	4	ENSGT00940000155704 #32	ENSGT00390000003585 #31	ENSGT00390000015936 #30	ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00390000018361 #23	ENSGT00940000158461 #24	ENSGT00390000002675 #25	ENSGT00940000153370.a.b #26	ENSGT00940000154071.B #27	ENSGT00390000017022 #28	ENSGT00520000055570.B #29	ENSGT00940000156603	ENSGT00940000157474	ENSGT00550000075035	ENSGT00530000063168.b	ENSGT00940000159781	ENSGT00390000001024	ENSGT00940000160069	ENSGT00940000155172
Common wall lizard	MODERN SPECIES	11	EXOC8 (ENSPMRG00000005460) #30	RHOU (ENSPMRG00000005457) #10	ENSPMRG00000005452	RAB4A (ENSPMRG00000005448) #11	CCSAP (ENSPMRG00000005446) #12	ACTA1 (ENSPMRG00000005431) #13	NUP133 (ENSPMRG00000005423) #14	ABCB10 (ENSPMRG00000005408) #15	TAF5L (ENSPMRG00000005402) #16	URB2 (ENSPMRG00000005396) #17	GALNT2 (ENSPMRG00000005380) #18	ENSPMRG00000005373	PGBD5 (ENSPMRG00000005357) #19	COG2 (ENSPMRG00000005329) #20	AGT (ENSPMRG00000005320) #21	CAPN9 (ENSPMRG00000005310) #22	C1orf198 (ENSPMRG00000005304) #23	TTC13 (ENSPMRG00000005290) #24	ARV1 (ENSPMRG00000005283) #25	FAM89A (ENSPMRG00000005275) #26	TRIM67 (ENSPMRG00000005232) #27	C1orf131 (ENSPMRG00000005223) #28	GNPAT (ENSPMRG00000005198) #29	PDCD2 (ENSPMRG00000005193)	TBP (ENSPMRG00000005189)	PSMB1 (ENSPMRG00000005182)	FAM120B (ENSPMRG00000005168)	DLL1 (ENSPMRG00000005159)	ERMARD (ENSPMRG00000005147)	DYNLT2 (ENSPMRG00000005140)	PHF10 (ENSPMRG00000005133)
Argentine black and white tegu	MODERN SPECIES	2	EGLN1 (ENSSMRG00000022015) #32	SPRTN (ENSSMRG00000022016) #31	EXOC8 (ENSSMRG00000022018) #30	RHOU (ENSSMRG00000022019) #10	RAB4A (ENSSMRG00000022022) #11	CCSAP (ENSSMRG00000022023) #12	ACTA1 (ENSSMRG00000022024) #13	NUP133 (ENSSMRG00000022025) #14	ABCB10 (ENSSMRG00000022027) #15	TAF5L (ENSSMRG00000022028) #16	URB2 (ENSSMRG00000022030) #17	GALNT2 (ENSSMRG00000022033) #18	PGBD5 (ENSSMRG00000022035) #19	COG2 (ENSSMRG00000022037) #20	AGT (ENSSMRG00000022038) #21	CAPN9 (ENSSMRG00000022040) #22	ENSSMRG00000022045	C1orf198 (ENSSMRG00000022047) #23	TTC13 (ENSSMRG00000022051) #24	ARV1 (ENSSMRG00000022055) #25	FAM89A (ENSSMRG00000022057) #26	TRIM67 (ENSSMRG00000022059) #27	C1orf131 (ENSSMRG00000022062) #28	GNPAT (ENSSMRG00000022063) #29	PDCD2 (ENSSMRG00000022064)	TBP (ENSSMRG00000022065)	PSMB1 (ENSSMRG00000022066)	FAM120B (ENSSMRG00000022068)	DLL1 (ENSSMRG00000022069)	ERMARD (ENSSMRG00000022071)	DYNLT2 (ENSSMRG00000022072)
tuatara	MODERN SPECIES	199													GALNT2 (ENSSPUG00000002558) #18	PGBD5 (ENSSPUG00000002508) #19	COG2 (ENSSPUG00000002496) #20	CAPN9 (ENSSPUG00000002340) #22	C1orf198 (ENSSPUG00000002255) #23	TTC13 (ENSSPUG00000001607) #24	ARV1 (ENSSPUG00000001528) #25	FAM89A (ENSSPUG00000001519) #26	TRIM67 (ENSSPUG00000001449) #27	C1orf131 (ENSSPUG00000001431) #28	GNPAT (ENSSPUG00000001419) #29	PDCD2 (ENSSPUG00000001408)	ENSSPUG00000001399	TBP (ENSSPUG00000001392)	PSMB1 (ENSSPUG00000001386)	FAM120B (ENSSPUG00000001316)	DLL1 (ENSSPUG00000001294)
Anura	ANCESTRAL SPECIES	434														ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22
Frog	MODERN SPECIES	5	PRR18 (ENSXETG00000037784)	tbxt (ENSXETG00000026572)	ENSXETG00000042559	pde10a (ENSXETG00000005369)	c6orf118 (ENSXETG00000005368)	ENSXETG00000005367	qki (ENSXETG00000015705)	pacrg (ENSXETG00000010781)	ENSXETG00000047260	agpat4 (ENSXETG00000013131)	scaf8 (ENSXETG00000013132)	cnksr3 (ENSXETG00000023302)	unc93a.1 (ENSXETG00000044848)	afdn (ENSXETG00000023305)	XB22065091 [provisional:unc93a] (ENSXETG00000034497)	capn9 (ENSXETG00000023310) #22	taf5l (ENSXETG00000023330) #16	urb2 (ENSXETG00000023331) #17	galnt2 (ENSXETG00000023332) #18	pgbd5 (ENSXETG00000023336) #19	pdgfrl.2 (ENSXETG00000023338)	pigh (ENSXETG00000032968)	cog2 (ENSXETG00000023340) #20	ENSXETG00000045614	tmem181 (ENSXETG00000023341)	agt (ENSXETG00000023342) #21	tulp4 (ENSXETG00000032878)	serac1 (ENSXETG00000023344)	gtf2h5 (ENSXETG00000048234)	snx9 (ENSXETG00000023346)	synj2 (ENSXETG00000034066)
Leishan spiny toad	MODERN SPECIES	7	MEMO1 (ENSLLEG00000024743)	PSEN2 (ENSLLEG00000024395)	DPY30 (ENSLLEG00000024338)	ENSLLEG00000024322	ENSLLEG00000024309	ENSLLEG00000024296	THBS2 (ENSLLEG00000023860)	ENSLLEG00000023816	ENSLLEG00000023793	WDR27 (ENSLLEG00000022789)	C6orf120 (ENSLLEG00000022689)	PHF10 (ENSLLEG00000022390)	COG2 (ENSLLEG00000022250) #20	ENSLLEG00000022155	ENSLLEG00000022012 #21	CAPN9 (ENSLLEG00000021851) #22	ENSLLEG00000021527	AHCTF1 (ENSLLEG00000021260)	RNF217 (ENSLLEG00000021109)	ENSLLEG00000021052	ENSLLEG00000021014	TPD52L1 (ENSLLEG00000020816)	HDDC2 (ENSLLEG00000020665)	ENSLLEG00000020633	ARHGAP18 (ENSLLEG00000020421)	ENSLLEG00000020356	LAMA2 (ENSLLEG00000017284)	ENSLLEG00000017125	ENSLLEG00000017101	ENSLLEG00000017078	ENSLLEG00000017050
Coelacanth	MODERN SPECIES	3594																CAPN9 (ENSLACG00000001048) #22
Actinopterygii	ANCESTRAL SPECIES	245				ENSGT00940000156644 #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048 #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00940000157628	ENSGT00390000002789	ENSGT00390000013215	ENSGT00940000158236
Reedfish	MODERN SPECIES	11	cdc42bpab (ENSECRG00000001749)	lft2 (ENSECRG00000001876)	tmem63a (ENSECRG00000002026)	rsph9 (ENSECRG00000002067)	rsph9 (ENSECRG00000002101)	rsph9 (ENSECRG00000002130)	mrps18a (ENSECRG00000002145)	vegfab (ENSECRG00000002185)	ENSECRG00000002219	acbd3 (ENSECRG00000002232)	lin9 (ENSECRG00000002268)	ENSECRG00000002325	pgbd5 (ENSECRG00000002343) #19	cog2 (ENSECRG00000002358) #20	agt (ENSECRG00000002382) #21	capn9 (ENSECRG00000002406) #22	ENSECRG00000002432	PHACTR2 (ENSECRG00000002447)	ltv1 (ENSECRG00000002473)	ENSECRG00000002503	sf3b5 (ENSECRG00000002516)	oprm1 (ENSECRG00000002528)	rgs17 (ENSECRG00000002543)	ENSECRG00000002619	ENSECRG00000003508	ENSECRG00000003514	ENSECRG00000003534	tbp (ENSECRG00000003554)	ENSECRG00000003564	ENSECRG00000003571	CCSAP (ENSECRG00000003579) #12
Neopterygii	ANCESTRAL SPECIES	92	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.e.a #10	ENSGT00940000156644.e.b #10	ENSGT00940000157464 #11	ENSGT00390000003512 #12	ENSGT00940000156048.e.a.a #13	ENSGT00390000011529 #14	ENSGT00940000157680 #15	ENSGT00940000153342.b #16	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00940000157628	ENSGT00390000002789	ENSGT00390000013215	ENSGT00940000158236	ENSGT00940000155393.d	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000161124	ENSGT00990000204028	ENSGT01030000235197	ENSGT00940000160850	ENSGT00940000158448	ENSGT00530000063484.a	ENSGT00530000064150	ENSGT00740000116878
Spotted gar	MODERN SPECIES	654	psmb1 (ENSLOCG00000015486)	tbp (ENSLOCG00000015481)	pdcd2 (ENSLOCG00000015478)	rhoua (ENSLOCG00000015476) #10	rab4a (ENSLOCG00000015475) #11	ccsapb (ENSLOCG00000015472) #12	acta1b (ENSLOCG00000015470) #13	NUP133 (ENSLOCG00000015468) #14	ABCB10 (ENSLOCG00000015465) #15	taf5l (ENSLOCG00000015464) #16	urb2 (ENSLOCG00000015462) #17	galnt2 (ENSLOCG00000015454) #18	pgbd5 (ENSLOCG00000015452) #19	cog2 (ENSLOCG00000015450) #20	agt (ENSLOCG00000015448) #21	capn9 (ENSLOCG00000015444) #22	PHACTR2 (ENSLOCG00000015443)	ltv1 (ENSLOCG00000015440)	sf3b5 (ENSLOCG00000017352)	oprm1 (ENSLOCG00000015439)	rgs17 (ENSLOCG00000015438)	PCNX2 (ENSLOCG00000015434)	MAP3K21 (ENSLOCG00000015431)	IL22RA2 (ENSLOCG00000015429)	ENSLOCG00000015428	si:ch73-52p7.1 (ENSLOCG00000017351)	olig3 (ENSLOCG00000017350)	TNFAIP3 (ENSLOCG00000015425)	perp (ENSLOCG00000015423)	ARFGEF3 (ENSLOCG00000015418)	ENSLOCG00000015417
Osteoglossocephalai	ANCESTRAL SPECIES	104	ENSGT00530000063168.b	ENSGT00550000075035	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.e.a #10	ENSGT00940000156644.e.b #10	ENSGT00940000157464 #11	ENSGT00390000003512.q #12	ENSGT00940000156048.e.b.a #13	ENSGT00940000157680 #15	ENSGT00390000009258 #17	ENSGT00940000156958 #18	ENSGT00510000047893 #19	ENSGT00390000012040 #20	ENSGT00890000139531 #21	ENSGT00940000158966 #22	ENSGT00940000157628	ENSGT00390000002789	ENSGT00390000013215	ENSGT00940000158236	ENSGT00940000155393.d	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000161124	ENSGT00990000204028	ENSGT01030000235197	ENSGT00940000160850	ENSGT00940000158448	ENSGT00530000063484.a	ENSGT00530000064150	ENSGT00740000116878
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000158966 #22
P. kingsleyae	MODERN SPECIES	21	ENSPKIG00000008104	ENSPKIG00000008132	chmp2a (ENSPKIG00000008158)	ENSPKIG00000008202	ENSPKIG00000008249	ENSPKIG00000008308	ppp1r12c (ENSPKIG00000008387)	ACYP2 (ENSPKIG00000008416)	ENSPKIG00000008430	SPTBN1 (ENSPKIG00000008490)	EML6 (ENSPKIG00000008716)	ENSPKIG00000008787	ENSPKIG00000008801	ENSPKIG00000008825	ENSPKIG00000008841	capn9 (ENSPKIG00000008922) #22	ENSPKIG00000009022	ENSPKIG00000009040	nup133 (ENSPKIG00000009104) #14	taf5l (ENSPKIG00000009210) #16	ENSPKIG00000009230	DLL1 (ENSPKIG00000009254)	myom2a (ENSPKIG00000009341)	ENSPKIG00000009503	ENSPKIG00000009554	ENSPKIG00000009585	ENSPKIG00000009596
Asian bonytongue	MODERN SPECIES	13	ST7 (ENSSFOG00015004605)	wnt2 (ENSSFOG00015004572)	CTTNBP2 (ENSSFOG00015004449)	LSM8 (ENSSFOG00015027761)	calua (ENSSFOG00015004362)	tnpo3 (ENSSFOG00015004256)	IRF5 (ENSSFOG00015004188)	KCP (ENSSFOG00015003960)	atp6v1f (ENSSFOG00015003935)	ENSSFOG00015003902	ENSSFOG00015003882	IMPDH1 (ENSSFOG00015003842)	ENSSFOG00015003791	ENSSFOG00015003784	LRRC4 (ENSSFOG00015027758)	capn9 (ENSSFOG00015003663) #22	FMN2 (ENSSFOG00015003637)	GREM2 (ENSSFOG00015003622)	ENSSFOG00015003613	ENSSFOG00015025531	krt94 (ENSSFOG00015003590)	krt15 (ENSSFOG00015003577)	npepps (ENSSFOG00015003510)	KRT222 (ENSSFOG00015003497)	ccr7 (ENSSFOG00015003494)	sp2 (ENSSFOG00015003465)	cwc25 (ENSSFOG00015003449)	psmb3 (ENSSFOG00015003420)	ENSSFOG00015003392	chmp2a (ENSSFOG00015003361)	mrpl4 (ENSSFOG00015003308)
Clupeocephala	ANCESTRAL SPECIES	37			ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00980000199991	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.j	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r
Otomorpha	ANCESTRAL SPECIES	102	ENSGT01100000265091	ENSGT00940000154186.a.r	ENSGT00530000063867.b.a	ENSGT00940000155078.a.b.a.b	ENSGT00940000160809	ENSGT00390000017504	ENSGT00950000183213.a.a.a	ENSGT00390000017489.b	ENSGT00940000157340.k.a	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.b.b #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00980000199991	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.j	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r
Otophysi	ANCESTRAL SPECIES	28	ENSGT00950000183139.C	ENSGT00510000047513	ENSGT00950000182849.B.c.a.a	ENSGT00940000156708.a.a	ENSGT00940000154396.b.a.a.b	ENSGT01050000244879.a.b.f	ENSGT00390000011987	ENSGT00390000017489.b	ENSGT00940000157340.k.a	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.b.b #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00980000199991	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263891	ENSGT01100000263985
Characiphysae	ANCESTRAL SPECIES	32	ENSGT00940000153430.b	ENSGT00390000010768	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00390000010591	ENSGT00390000012248	ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b.e.a	ENSGT00390000009597.d	ENSGT00940000156327.l	ENSGT00940000156841.a.b	ENSGT00940000154556.c.a	ENSGT00530000063000.a.a.b.j	ENSGT00940000157700.c	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00980000199991	ENSGT00390000002789	ENSGT01100000266716	ENSGT00990000204616	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a.e	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263891	ENSGT01100000263985
Characiphysae_b	ANCESTRAL SPECIES	49	ENSGT00390000010768	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00390000010591	ENSGT00390000012248	ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b.e.a	ENSGT00390000009597.d	ENSGT00390000009597.c	ENSGT00940000156327.l	ENSGT00940000156841.a.b	ENSGT00940000154556.c.a	ENSGT00530000063000.a.a.b.j	ENSGT00940000157700.c	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00980000199991	ENSGT00390000002789	ENSGT01100000266716	ENSGT00990000204616	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a.e	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263891	ENSGT00940000167432
Characoidei	ANCESTRAL SPECIES	54						ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b.e.a	ENSGT00390000009597.d	ENSGT00390000009597.c	ENSGT00940000156327.l	ENSGT00940000156841.a.b	ENSGT00940000154556.c.a	ENSGT00530000063000.a.a.b.j	ENSGT00940000157700.c	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00980000199991	ENSGT00390000002789	ENSGT00990000204616	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a.e	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b
Red-bellied piranha	MODERN SPECIES	394			ENSPNAG00000017571	ENSPNAG00000017607	ENSPNAG00000017614	ENSPNAG00000017630	cnrip1a (ENSPNAG00000017655)	ppp3r1b (ENSPNAG00000017717)	etaa1a (ENSPNAG00000017797)	meis1a (ENSPNAG00000017848)	SPRED2 (ENSPNAG00000017884)	actr2a (ENSPNAG00000017942)	atg4da (ENSPNAG00000017981)	MAST1 (ENSPNAG00000018055)	taf5l (ENSPNAG00000018107) #16	capn9 (ENSPNAG00000018138) #22	ENSPNAG00000018152	ltv1 (ENSPNAG00000018174)	ifngr1 (ENSPNAG00000018185)	ENSPNAG00000018208	ENSPNAG00000005184
Mexicana tetra	MODERN SPECIES	3	ENSAMXG00000003518	ENSAMXG00000003502	ENSAMXG00000033547	ENSAMXG00000037034	ENSAMXG00000034099	cnrip1a (ENSAMXG00000039764)	ppp3r1b (ENSAMXG00000040369)	etaa1a (ENSAMXG00000040178)	ENSAMXG00000041200	meis1a (ENSAMXG00000003454)	SPRED2 (ENSAMXG00000003444)	actr2a (ENSAMXG00000039248)	atg4da (ENSAMXG00000039480)	MAST1 (ENSAMXG00000003343)	taf5l (ENSAMXG00000038854) #16	capn9 (ENSAMXG00000003267) #22	ltv1 (ENSAMXG00000003235)	ifngr1 (ENSAMXG00000032169)	ENSAMXG00000003141	pus10 (ENSAMXG00000003093)	cct4 (ENSAMXG00000003076)	FAM161A (ENSAMXG00000003072)	ENSAMXG00000029769	ENSAMXG00000003069	USP34 (ENSAMXG00000002913)	ENSAMXG00000042452	commd1 (ENSAMXG00000039464)	b3gnt2a (ENSAMXG00000035776)	ENSAMXG00000029375	otx2a (ENSAMXG00000043592)	mdh1aa (ENSAMXG00000002785)
Electric eel	MODERN SPECIES	208	ENSEEEG00000016790	ENSEEEG00000016793	snrpb2 (ENSEEEG00000016798)	prokr1a (ENSEEEG00000016805)	ENSEEEG00000016813	fbxo48 (ENSEEEG00000016816)	cnrip1a (ENSEEEG00000016817)	ppp3r1b (ENSEEEG00000016822)	etaa1a (ENSEEEG00000016855)	meis1a (ENSEEEG00000016864)	ENSEEEG00000016889	actr2a (ENSEEEG00000016907)	atg4da (ENSEEEG00000017030)	ENSEEEG00000017036	taf5l (ENSEEEG00000017044) #16	capn9 (ENSEEEG00000017046) #22	ltv1 (ENSEEEG00000017049)	ENSEEEG00000017050	ENSEEEG00000017051	ENSEEEG00000017054	ENSEEEG00000017055	pus10 (ENSEEEG00000017062)	cct4 (ENSEEEG00000017085)	ENSEEEG00000017089	XPO1 (ENSEEEG00000017098)	ENSEEEG00000017201	commd1 (ENSEEEG00000017203)	b3gnt2a (ENSEEEG00000017205)	ENSEEEG00000017208	otx2a (ENSEEEG00000017211)	mdh1aa (ENSEEEG00000017217)
Channel catfish	MODERN SPECIES	18	ENSIPUG00000024298	rnaseh2a (ENSIPUG00000024299)	snrpb2 (ENSIPUG00000024300)	prokr1a (ENSIPUG00000024305)	aplf (ENSIPUG00000024306)	fbxo48 (ENSIPUG00000024307)	Cnrip1 (ENSIPUG00000024308)	Ppp3r1 (ENSIPUG00000024309)	etaa1 (ENSIPUG00000024335)	MEIS1 (ENSIPUG00000024342)	SPRED2 (ENSIPUG00000024350)	actr2a (ENSIPUG00000024353)	atg4d (ENSIPUG00000024357)	MAST1 (ENSIPUG00000024360)	taf5l (ENSIPUG00000024363) #16	capn9 (ENSIPUG00000024364) #22	ltv1 (ENSIPUG00000024372)	ENSIPUG00000024375	ifngr1 (ENSIPUG00000024376)	ENSIPUG00000024377	b3gnt2a (ENSIPUG00000024378)	Commd1 (ENSIPUG00000024384)	ENSIPUG00000024386	USP34 (ENSIPUG00000024387)	XPO1 (ENSIPUG00000024394)	ENSIPUG00000024404	ENSIPUG00000024406	cct4 (ENSIPUG00000024407)	pus10 (ENSIPUG00000005627)	ENSIPUG00000005709	otx1 (ENSIPUG00000005796)
Cyprinoidei	ANCESTRAL SPECIES	30	ENSGT00950000183139.C	ENSGT00510000047513	ENSGT00950000182849.B.c.a.a	ENSGT00940000156708.a.a	ENSGT00940000154396.b.a.a.b	ENSGT01050000244879.a.b.f	ENSGT00390000011987	ENSGT00390000017489.b	ENSGT00940000157340.k.a	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.b.b #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT00940000156589	ENSGT00940000160382	ENSGT00940000157878	ENSGT00940000156171.g
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	139	ENSGT00950000182849.B.c.a.a.f	ENSGT00940000165523.a.a	ENSGT00940000167012.a	ENSGT00950000183139.C.d	ENSGT00950000182849.B.c.a.a.e	ENSGT00940000156708.a.a	ENSGT00940000154396.b.a.a.b	ENSGT01050000244879.a.b.f.a	ENSGT00390000011987.i	ENSGT00390000017489.b.q.a	ENSGT00940000157340.k.a.f	ENSGT00940000159781.b.a	ENSGT00940000156644.e.a.b #10	ENSGT00390000003512.r.f #12	ENSGT00940000156048.e.b.b.a #13	ENSGT00940000158966.c #22	ENSGT00990000204616.c.b	ENSGT00940000166495.f	ENSGT00390000007529.h	ENSGT00550000074956.d	ENSGT00940000153408.B.s.b.p	ENSGT00940000155345.r.e	ENSGT00390000012029.fb	ENSGT01100000263985.a	ENSGT00940000156589.j.b	ENSGT00940000160382.c.b	ENSGT00940000157878.k	ENSGT00940000156171.g.i
Cyprininae_a	ANCESTRAL SPECIES	64	ENSGT00950000183139.C.c	ENSGT00510000047513	ENSGT00950000182849.B.c.a.a.f	ENSGT00940000156708.a.a.l	ENSGT00940000154396.b.a.a.b.e	ENSGT01050000244879.a.b.f.a	ENSGT00390000011987.i	ENSGT00390000017489.b.q.a	ENSGT00940000157340.k.a.f	ENSGT00940000159781.b.a	ENSGT00940000156644.e.a.b #10	ENSGT00390000003512.r.f #12	ENSGT00940000156048.e.b.b.a #13	ENSGT00390000011529.g.a #14	ENSGT00940000153342.b.y #16	ENSGT00940000158966.c #22	ENSGT00990000204616.c.b	ENSGT00940000166495.f	ENSGT00390000007529.g	ENSGT00550000074956.d	ENSGT00940000153408.B.s.b.p	ENSGT00940000158659	ENSGT00390000012029.gb	ENSGT00940000155345.r.f	ENSGT01100000263985.b	ENSGT00940000156589.i	ENSGT00940000160382.c.a	ENSGT00940000157878.l	ENSGT00940000156171.g.j	ENSGT00390000017043.c	ENSGT00390000016264.d.b
Common carp reference	MODERN SPECIES	22	ENSCCRG00000081340	NTHL1 (ENSCCRG00000025300)	ENSCCRG00000077985	ENSCCRG00000039976	rln3b (ENSCCRG00000039926)	ENSCCRG00000039923	DCAF15 (ENSCCRG00000039912)	smdt1b (ENSCCRG00000062741)	ENSCCRG00000029424	dla (ENSCCRG00000029431)	RHOU (ENSCCRG00000029462) #10	ENSCCRG00000029468 #12	acta1a (ENSCCRG00000073206) #13	nup133 (ENSCCRG00000057119) #14	taf5l (ENSCCRG00000057032) #16	capn9 (ENSCCRG00000058378) #22	ENSCCRG00000074183	ifngr1 (ENSCCRG00000016308)	ltv1 (ENSCCRG00000079639)	ENSCCRG00000015458	ENSCCRG00000062601	ENSCCRG00000071993	ENSCCRG00000041566	ENSCCRG00000034316	pus10 (ENSCCRG00000016540)	cct4 (ENSCCRG00000054358)	ENSCCRG00000014265	USP34 (ENSCCRG00000014708)	b3gnt2a (ENSCCRG00000067579)	ENSCCRG00000069925	elmod2 (ENSCCRG00000018480)
Golden-line barbel	MODERN SPECIES	180	TSC2 (ENSSGRG00000042070)	NTHL1 (ENSSGRG00000042207)	ENSSGRG00000042208	TNPO2 (ENSSGRG00000042225)	rln3b (ENSSGRG00000042951)	RFX1 (ENSSGRG00000042959)	DCAF15 (ENSSGRG00000043118)	smdt1b (ENSSGRG00000043119)	ENSSGRG00000043120	dla (ENSSGRG00000043123)	RHOU (ENSSGRG00000043128) #10	ENSSGRG00000043130 #12	nup133 (ENSSGRG00000043133) #14	acta1a (ENSSGRG00000043144) #13	taf5l (ENSSGRG00000043955) #16	ENSSGRG00000043957 #22	ENSSGRG00000043959	ENSSGRG00000043969	pus10 (ENSSGRG00000044675)	cct4 (ENSSGRG00000044841)	ENSSGRG00000045018	XPO1 (ENSSGRG00000045026)	commd1 (ENSSGRG00000045419)	ENSSGRG00000045420	elmod2 (ENSSGRG00000045421)	ENSSGRG00000045422	TBC1D9 (ENSSGRG00000045428)	ENSSGRG00000045605	rnf150a (ENSSGRG00000045606)	znf330 (ENSSGRG00000045610)	il15 (ENSSGRG00000045614)
Goldfish	MODERN SPECIES		ENSCARG00000000855	ENSCARG00000000910	TSC2 (ENSCARG00000000987)	NTHL1 (ENSCARG00000001022)	ENSCARG00000001027	rln3b (ENSCARG00000001042)	RFX1 (ENSCARG00000001045)	smdt1b (ENSCARG00000001055)	ENSCARG00000001059	dla (ENSCARG00000001070)	RHOU (ENSCARG00000001110) #10	ENSCARG00000001113 #12	acta1a (ENSCARG00000001114) #13	nup133 (ENSCARG00000001124) #14	taf5l (ENSCARG00000001144) #16	capn9 (ENSCARG00000001166) #22	ifngr1 (ENSCARG00000001275)	ENSCARG00000001289	ENSCARG00000001302	ENSCARG00000001326	cct4 (ENSCARG00000001396)	XPO1 (ENSCARG00000001499)	commd1 (ENSCARG00000001677)	b3gnt2a (ENSCARG00000001680)	ENSCARG00000001683	elmod2 (ENSCARG00000001689)	ucp1 (ENSCARG00000001698)	TBC1D9 (ENSCARG00000001811)	rnf150a (ENSCARG00000002684)	znf330 (ENSCARG00000002695)	ENSCARG00000002722
Cyprininae	ANCESTRAL SPECIES	338				ENSGT01030000235265	ENSGT01050000244879.a.b.f.b	ENSGT00390000011987.j	ENSGT00390000017489.b.q.b	ENSGT00940000157340.k.a.e	ENSGT00940000159781.b.b	ENSGT00940000156644.e.a.a #10	ENSGT00390000003512.r.e #12	ENSGT00940000156048.e.b.b.b #13	ENSGT00390000011529.g.b #14	ENSGT00390000011529.g.a #14	ENSGT00940000153342.b #16	ENSGT00940000158966.d #22	ENSGT01040000243168	ENSGT00390000002789.k	ENSGT00990000204616.c.a	ENSGT00940000166495.e	ENSGT00390000007529.g	ENSGT00550000074956.c	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b.o	ENSGT00940000158659	ENSGT00390000012029.gb	ENSGT00940000155345.r.f	ENSGT01100000263985.b	ENSGT00940000156589.i	ENSGT00940000160382.c.a	ENSGT00940000157878.l
Cyprininae_a	ANCESTRAL SPECIES	381	ENSGT00950000183139.C.d	ENSGT00950000182849.B.c.a.a.e	ENSGT00940000156708.a.a.k	ENSGT00940000154396.b.a.a.b.f	ENSGT01030000235265	ENSGT01050000244879.a.b.f.b	ENSGT00390000011987.j	ENSGT00390000017489.b.q.b	ENSGT00940000157340.k.a.e	ENSGT00940000159781.b.b	ENSGT00940000156644.e.a.a #10	ENSGT00390000003512.r.e #12	ENSGT00940000156048.e.b.b.b #13	ENSGT00390000011529.g.b #14	ENSGT00940000153342.b.z #16	ENSGT00940000158966.d #22	ENSGT01040000243168	ENSGT00390000002789.k	ENSGT00990000204616.c.a	ENSGT00940000166495.e	ENSGT00550000074956.c	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b.o
Common carp reference	MODERN SPECIES	27	ENSCCRG00000080661	ENSCCRG00000055869	ENSCCRG00000031975	ENSCCRG00000073825	ENSCCRG00000079627	ENSCCRG00000018506	rln3b (ENSCCRG00000074572)	ENSCCRG00000010256	DCAF15 (ENSCCRG00000018616)	ENSCCRG00000018620	dla (ENSCCRG00000027776)	ENSCCRG00000057480 #10	acta1a (ENSCCRG00000060597) #13	nup133 (ENSCCRG00000077497) #14	taf5l (ENSCCRG00000082336) #16	capn9 (ENSCCRG00000077170) #22	ENSCCRG00000040759	ltv1 (ENSCCRG00000071069)	ifngr1 (ENSCCRG00000040763)	ENSCCRG00000040789	pus10 (ENSCCRG00000041553)	cct4 (ENSCCRG00000063170)	ENSCCRG00000041780	ENSCCRG00000041784	XPO1 (ENSCCRG00000002433)	USP34 (ENSCCRG00000075191)	commd1 (ENSCCRG00000018303)	b3gnt2a (ENSCCRG00000018302)	elmod2 (ENSCCRG00000018293)	ucp1 (ENSCCRG00000054275)	TBC1D9 (ENSCCRG00000042157)
Golden-line barbel	MODERN SPECIES	251	ENSSGRG00000026080	ENSSGRG00000026081	TSC2 (ENSSGRG00000026083)	ENSSGRG00000026518	TNPO2 (ENSSGRG00000026522)	rln3b (ENSSGRG00000026592)	ENSSGRG00000026593	ENSSGRG00000026594	DCAF15 (ENSSGRG00000026595)	smdt1b (ENSSGRG00000026600)	ENSSGRG00000026598	dla (ENSSGRG00000026601)	RHOU (ENSSGRG00000026606) #10	CCSAP (ENSSGRG00000026610) #12	acta1a (ENSSGRG00000026618) #13	capn9 (ENSSGRG00000027376) #22	ltv1 (ENSSGRG00000027443)	ENSSGRG00000027445	ENSSGRG00000027449	cct4 (ENSSGRG00000027455)	ENSSGRG00000027971	XPO1 (ENSSGRG00000027973)	USP34 (ENSSGRG00000028022)	commd1 (ENSSGRG00000028070)	b3gnt2a (ENSSGRG00000028071)	ENSSGRG00000028072	elmod2 (ENSSGRG00000028074)	ucp1 (ENSSGRG00000028075)	TBC1D9 (ENSSGRG00000028086)	rnf150a (ENSSGRG00000028788)	znf330 (ENSSGRG00000028790)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2685			SST5C (ENSCARG00000069336)	ENSCARG00000069159	TSC2 (ENSCARG00000068767)	ENSCARG00000068724	TNPO2 (ENSCARG00000068697)	ENSCARG00000068679	RFX1 (ENSCARG00000068638)	DCAF15 (ENSCARG00000068587)	smdt1b (ENSCARG00000068583)	ENSCARG00000068577	dla (ENSCARG00000068471)	acta1a (ENSCARG00000068448) #13	ENSCARG00000068438	capn9 (ENSCARG00000067839) #22	ENSCARG00000067788	ltv1 (ENSCARG00000067752)	ENSCARG00000067729	ENSCARG00000067718	ENSCARG00000067709	ENSCARG00000067668	pus10 (ENSCARG00000067342)	cct4 (ENSCARG00000067311)	ENSCARG00000067301	ENSCARG00000067285	XPO1 (ENSCARG00000067088)	USP34 (ENSCARG00000066181)	commd1 (ENSCARG00000066157)	ENSCARG00000066129	elmod2 (ENSCARG00000065963)
Goldfish	MODERN SPECIES	3522		SST5C (ENSCARG00000053987)	ENSCARG00000054008	TSC2 (ENSCARG00000054058)	ENSCARG00000055374	TNPO2 (ENSCARG00000055420)	ENSCARG00000055535	RFX1 (ENSCARG00000055576)	DCAF15 (ENSCARG00000055633)	smdt1b (ENSCARG00000055645)	ENSCARG00000055667	dla (ENSCARG00000055684)	RHOU (ENSCARG00000055801) #10	ENSCARG00000055806 #12	acta1a (ENSCARG00000055821) #13	capn9 (ENSCARG00000055877) #22	ltv1 (ENSCARG00000056189)	ENSCARG00000056388	ENSCARG00000056450	ENSCARG00000056479	pus10 (ENSCARG00000056626)	cct4 (ENSCARG00000057382)	ENSCARG00000057425	ENSCARG00000057448	XPO1 (ENSCARG00000057498)	USP34 (ENSCARG00000057662)	commd1 (ENSCARG00000059847)	b3gnt2a (ENSCARG00000059908)	ENSCARG00000059923	elmod2 (ENSCARG00000059947)	ucp1 (ENSCARG00000059976)
Zebrafish	MODERN SPECIES		NTHL1 (ENSDARG00000042881)	ENSDARG00000113474	TNPO2 (ENSDARG00000042887)	ENSDARG00000113296	rln3b (ENSDARG00000116898)	RFX1 (ENSDARG00000075904)	DCAF15 (ENSDARG00000077790)	smdt1b (ENSDARG00000098852)	ENSDARG00000075870	dla (ENSDARG00000010791)	RHOU (ENSDARG00000005626) #10	CCSAP (ENSDARG00000025325) #12	acta1a (ENSDARG00000036371) #13	nup133 (ENSDARG00000010078) #14	taf5l (ENSDARG00000025808) #16	capn9 (ENSDARG00000012341) #22	ltv1 (ENSDARG00000008490)	ifngr1 (ENSDARG00000074771)	ENSDARG00000087205	pus10 (ENSDARG00000079973)	cct4 (ENSDARG00000013475)	FAM161A (ENSDARG00000089742)	XPO1 (ENSDARG00000078041)	USP34 (ENSDARG00000102252)	ENSDARG00000095360	commd1 (ENSDARG00000031203)	b3gnt2a (ENSDARG00000052376)	zgc:66455 (ENSDARG00000052375)	elmod2 (ENSDARG00000101669)	ucp1 (ENSDARG00000023151)	TBC1D9 (ENSDARG00000059900)
Clupeiformes	ANCESTRAL SPECIES	107															ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00390000002789	ENSGT00980000199991	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT01100000263985	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a
Atlantic herring	MODERN SPECIES	16	ENSCHAG00000006176	ENSCHAG00000006189	ENSCHAG00000006346	ENSCHAG00000006370	ENSCHAG00000006380	rrp36 (ENSCHAG00000006397)	ENSCHAG00000006413	ENSCHAG00000006453	sipa1l2 (ENSCHAG00000006500) #35	ENSCHAG00000006584	EGLN1 (ENSCHAG00000006825) #32	ENSCHAG00000006842	ENSCHAG00000006907	ENSCHAG00000006913	taf5l (ENSCHAG00000006916) #16	capn9 (ENSCHAG00000006941) #22	ltv1 (ENSCHAG00000007249)	ENSCHAG00000007341	ENSCHAG00000007360	ENSCHAG00000007364	JAG1 (ENSCHAG00000007403)	ENSCHAG00000008090	ENSCHAG00000008099	cyp3a65 (ENSCHAG00000008170)	ENSCHAG00000010760	cyp3a65 (ENSCHAG00000010812)	ENSCHAG00000012415	ENSCHAG00000012506	esf1 (ENSCHAG00000012540)	ndufaf5 (ENSCHAG00000012673)	KIF16B (ENSCHAG00000012980)
Denticle herring	MODERN SPECIES	13	atf7ip (ENSDCDG00000014391)	ENSDCDG00000014384	grin2bb (ENSDCDG00000014226)	si:ch211-243a20.3 (ENSDCDG00000014187)	ENSDCDG00000014171	f8a (ENSDCDG00000014039)	emp1 (ENSDCDG00000014002)	ENSDCDG00000013976	ENSDCDG00000013951	egln1b (ENSDCDG00000013919) #32	sipa1l2 (ENSDCDG00000013867) #35	rrp36 (ENSDCDG00000028743)	tmem264 (ENSDCDG00000028740)	ENSDCDG00000028344	ENSDCDG00000028337	capn9 (ENSDCDG00000028177) #22	ENSDCDG00000028167	ltv1 (ENSDCDG00000028165)	ENSDCDG00000028163	ENSDCDG00000028109	pus10 (ENSDCDG00000028091)	cct4 (ENSDCDG00000028087)	ENSDCDG00000028085	ENSDCDG00000028083	ENSDCDG00000028081	cct4 (ENSDCDG00000028030)	ENSDCDG00000028017	XPO1 (ENSDCDG00000027989)	ENSDCDG00000027908	ENSDCDG00000027906	commd1 (ENSDCDG00000027904)
Euteleosteomorpha	ANCESTRAL SPECIES	18	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00980000199991	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601
Protacanthopterygii	ANCESTRAL SPECIES	76	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.b.a.b #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00390000002789	ENSGT00980000199991	ENSGT00990000204616	ENSGT00390000009916	ENSGT00940000154990.fb.a	ENSGT00940000158914	ENSGT00390000017614.e.a.b	ENSGT00940000156166.b.a.b	ENSGT00940000153846.a.b	ENSGT00940000154912.v	ENSGT00940000165172.b	ENSGT00440000033742.a.b.c	ENSGT00390000016493	ENSGT00390000012364.b	ENSGT00940000153469.a.a.l
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	100	ENSGT00940000156644.e.a.g #10	ENSGT00390000003512.r.d #12	ENSGT00940000156048.e.b.a.b.b #13	ENSGT00390000011529 #14	ENSGT00940000153342.b.gb #16	ENSGT00940000158966.f #22	ENSGT00390000002789.j	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00940000158914.b	ENSGT00390000017614.e.a.a.b.a	ENSGT00390000017614.e.a.b	ENSGT00940000156166.b.a.b.b	ENSGT00940000153342.b.fb #16	ENSGT00940000158966.e #22	ENSGT00390000002789.i	ENSGT00980000199991	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT00940000156166.b.a.b.a	ENSGT00940000153846.a.b	ENSGT00940000154912.v.e.a	ENSGT00940000165172.b.a	ENSGT00440000033742.a.b.c.b	ENSGT00390000016493	ENSGT00390000012364.b.c	ENSGT00390000010581.a	ENSGT00940000156498.g.b
Salmoninae_a	ANCESTRAL SPECIES	82	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g #10	ENSGT00390000003512.r.d #12	ENSGT00940000156048.e.b.a.b.b #13	ENSGT00390000011529.j #14	ENSGT00940000153342.b.fb #16	ENSGT00940000158966.e #22	ENSGT00390000002789.i	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT00940000156166.b.a.b.a	ENSGT00940000153846.a.b.c	ENSGT00940000154912.v.e.a	ENSGT00940000165172.b.a	ENSGT00440000033742.a.b.c.b	ENSGT00390000016493.k	ENSGT00390000012364.b.d	ENSGT00940000153469.a.a.l	ENSGT00390000010581.b	ENSGT00940000156498.g.b.d
Salmo	ANCESTRAL SPECIES	37	ENSGT00390000008848.k.a	ENSGT00940000157935.a.d	ENSGT00940000154406.d	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g #10	ENSGT00390000003512.r.d #12	ENSGT00940000156048.e.b.a.b.b #13	ENSGT00390000011529.j #14	ENSGT00940000153342.b.fb #16	ENSGT00940000158966.e #22	ENSGT00390000002789.i	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT00940000156166.b.a.b.a	ENSGT00940000153846.a.b.c	ENSGT00940000154912.v.e.a	ENSGT00940000165172.b.a	ENSGT00440000033742.a.b.c.b	ENSGT00390000016493.k	ENSGT00390000012364.b.d	ENSGT00940000153469.a.a.l	ENSGT00390000010581.b	ENSGT00940000156498.g.b.d
River trout	MODERN SPECIES	5	ENSSTUG00000005841	ENSSTUG00000007117	ENSSTUG00000007129	col9a1a (ENSSTUG00000007144)	ptp4a1 (ENSSTUG00000007168)	lgsn (ENSSTUG00000007181)	myom2a (ENSSTUG00000007222)	ENSSTUG00000007759	ENSSTUG00000011765	dla (ENSSTUG00000011770)	RHOU (ENSSTUG00000011777) #10	CCSAP (ENSSTUG00000011782) #12	ACTA1 (ENSSTUG00000011784) #13	nup133 (ENSSTUG00000011820) #14	taf5l (ENSSTUG00000012578) #16	capn9 (ENSSTUG00000012615) #22	ltv1 (ENSSTUG00000013229)	ENSSTUG00000013246	si:ch211-214c7.5 (ENSSTUG00000013260)	PKN1 (ENSSTUG00000013332)	map2k7 (ENSSTUG00000014327)	ENSSTUG00000014478	EVI5L (ENSSTUG00000014499)	DDX39A (ENSSTUG00000014760)	ENSSTUG00000014782	rab11fip4b (ENSSTUG00000014791)	utp6 (ENSSTUG00000014887)	suz12b (ENSSTUG00000015071)	ENSSTUG00000015774	tefm (ENSSTUG00000015800)	ADAP2 (ENSSTUG00000015811)
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000101448	col9a1a (ENSSSAG00000015756)	tp4a1 (ENSSSAG00000015747)	lgsn (ENSSSAG00000015736)	ENSSSAG00000103185	ENSSSAG00000120680	ENSSSAG00000094621	ENSSSAG00000007744	myom2a (ENSSSAG00000119139)	ENSSSAG00000083618	dla (ENSSSAG00000007717)	RHOU (ENSSSAG00000007710) #10	CCSAP (ENSSSAG00000007704) #12	ACTA1 (ENSSSAG00000007690) #13	nup133 (ENSSSAG00000006278) #14	ENSSSAG00000089284 #22	ltv1l (ENSSSAG00000005700)	ifngr1b (ENSSSAG00000005697)	ENSSSAG00000109745	si:ch211-214c7.5 (ENSSSAG00000005693)	ENSSSAG00000004995	map2k7 (ENSSSAG00000004417)	ENSSSAG00000098757	ENSSSAG00000076919	ENSSSAG00000076934	ENSSSAG00000113531	rab11fip4b (ENSSSAG00000076852)	utp6 (ENSSSAG00000076822)	suz12b (ENSSSAG00000005828)	atad5b (ENSSSAG00000076659)	tefm (ENSSSAG00000076655)
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00390000008848.k.a	ENSGT00940000157935.a.d	ENSGT00940000154406.c.a	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g #10	ENSGT00390000003512.r.d #12	ENSGT00940000156048.e.b.a.b.b #13	ENSGT00390000011529.j #14	ENSGT00940000153342.b.fb #16	ENSGT00940000158966.e #22	ENSGT00390000002789.i	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT01010000229885	ENSGT00940000156166.b.a.b.a	ENSGT00940000153846.a.b.c	ENSGT00940000154912.v.e.a	ENSGT00940000165172.b.a	ENSGT00440000033742.a.b.c.b	ENSGT00390000016493.k	ENSGT00390000012364.b.d	ENSGT00940000153469.a.a.l	ENSGT00390000010581.b
Oncorhynchus_a	ANCESTRAL SPECIES	51	ENSGT00390000008848.k.a	ENSGT00940000157935.a.d	ENSGT00940000154406.c.a	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g #10	ENSGT00390000003512.r.d #12	ENSGT00940000156048.e.b.a.b.b #13	ENSGT00390000011529.j #14	ENSGT00940000153342.b.fb #16	ENSGT00940000158966.e #22	ENSGT00390000002789.i	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT01010000229885	ENSGT00940000156166.b.a.b.a	ENSGT00940000153846.a.b.c	ENSGT00940000154912.v.e.a	ENSGT00940000165172.b.a	ENSGT00440000033742.a.b.c.b	ENSGT00390000016493.k	ENSGT00390000012364.b.d	ENSGT00940000153469.a.a.l	ENSGT00390000010581.b
Coho salmon	MODERN SPECIES		mrpl4 (ENSOKIG00005006639)	ENSOKIG00005006745	col9a1a (ENSOKIG00005006782)	ptp4a1 (ENSOKIG00005006799)	lgsn (ENSOKIG00005006846)	myom2a (ENSOKIG00005006977)	ENSOKIG00005009346	ENSOKIG00005009582	ENSOKIG00005016047	dla (ENSOKIG00005016056)	RHOU (ENSOKIG00005016090) #10	CCSAP (ENSOKIG00005000018) #12	ACTA1 (ENSOKIG00005000036) #13	nup133 (ENSOKIG00005000208) #14	taf5l (ENSOKIG00005000299) #16	capn9 (ENSOKIG00005000409) #22	ltv1 (ENSOKIG00005000517)	ENSOKIG00005000530	si:ch211-214c7.5 (ENSOKIG00005000539)	PKN1 (ENSOKIG00005000834)	map2k7 (ENSOKIG00005001518)	ENSOKIG00005001554	ENSOKIG00005001558	EVI5L (ENSOKIG00005001624)	DDX39A (ENSOKIG00005001783)	ENSOKIG00005001794	rab11fip4b (ENSOKIG00005001816)	utp6 (ENSOKIG00005002053)	suz12b (ENSOKIG00005002646)	ENSOKIG00005002751	tefm (ENSOKIG00005002774)
Chinook salmon	MODERN SPECIES	4	ENSOTSG00005033200	col9a1a (ENSOTSG00005033201)	ptp4a1 (ENSOTSG00005033203)	lgsn (ENSOTSG00005033204)	ENSOTSG00005033205	myom2a (ENSOTSG00005033220)	ENSOTSG00005035104	ENSOTSG00005035141	ENSOTSG00005045051	dla (ENSOTSG00005045053)	RHOU (ENSOTSG00005045072) #10	CCSAP (ENSOTSG00005045073) #12	ACTA1 (ENSOTSG00005045074) #13	nup133 (ENSOTSG00005045080) #14	taf5l (ENSOTSG00005045114) #16	capn9 (ENSOTSG00005045125) #22	ltv1 (ENSOTSG00005045563)	ENSOTSG00005045566	si:ch211-214c7.5 (ENSOTSG00005045569)	PKN1 (ENSOTSG00005045577)	map2k7 (ENSOTSG00005046822)	ENSOTSG00005046823	ENSOTSG00005046824	EVI5L (ENSOTSG00005046825)	DDX39A (ENSOTSG00005046826)	ENSOTSG00005046827	ENSOTSG00005046828	numbl (ENSOTSG00005046829)	ENSOTSG00005046830	coq8b (ENSOTSG00005046836)	fbxo46 (ENSOTSG00005046950)
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000016019	mrpl4 (ENSOMYG00000015911)	ENSOMYG00000069225	ENSOMYG00000015867	col9a1a (ENSOMYG00000015824)	ptp4a1 (ENSOMYG00000015817)	myom2a (ENSOMYG00000012269)	ENSOMYG00000011175	ENSOMYG00000011021	dla (ENSOMYG00000011005)	RHOU (ENSOMYG00000010995) #10	CCSAP (ENSOMYG00000010980) #12	ACTA1 (ENSOMYG00000030567) #13	nup133 (ENSOMYG00000010021) #14	taf5l (ENSOMYG00000009508) #16	capn9 (ENSOMYG00000008726) #22	ltv1 (ENSOMYG00000008075)	ENSOMYG00000008034	ENSOMYG00000051508	si:ch211-214c7.5 (ENSOMYG00000007848)	ENSOMYG00000074997	ENSOMYG00000007032	map2k7 (ENSOMYG00000005818)	ENSOMYG00000070447	ENSOMYG00000005658	ENSOMYG00000005540	ENSOMYG00000046318	ENSOMYG00000046307	rab11fip4b (ENSOMYG00000046257)	utp6 (ENSOMYG00000046210)	suz12b (ENSOMYG00000046196)
Huchen	MODERN SPECIES	237	ENSHHUG00000037212	ptp4a1 (ENSHHUG00000037221)	lgsn (ENSHHUG00000037257)	ENSHHUG00000037270	myom2a (ENSHHUG00000037276)	ENSHHUG00000037423	ENSHHUG00000037427	ENSHHUG00000037465	ENSHHUG00000038924	dla (ENSHHUG00000038935)	RHOU (ENSHHUG00000038957) #10	CCSAP (ENSHHUG00000038963) #12	ACTA1 (ENSHHUG00000038970) #13	nup133 (ENSHHUG00000039439) #14	taf5l (ENSHHUG00000039452) #16	capn9 (ENSHHUG00000039464) #22	ltv1 (ENSHHUG00000039717)	ENSHHUG00000039760	ENSHHUG00000039769	si:ch211-214c7.5 (ENSHHUG00000039773)	PKN1 (ENSHHUG00000039787)	map2k7 (ENSHHUG00000039957)	ENSHHUG00000039987	EVI5L (ENSHHUG00000040005)	DDX39A (ENSHHUG00000040112)	ENSHHUG00000040185	rab11fip4b (ENSHHUG00000040191)	ENSHHUG00000040214	utp6 (ENSHHUG00000040223)	suz12b (ENSHHUG00000040246)	atad5b (ENSHHUG00000040340)
Salmoninae	ANCESTRAL SPECIES	100	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h #10	ENSGT00390000003512.r.c #12	ENSGT00940000156048.e.b.a.b.a #13	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab	ENSGT00950000182787.A.a.d.b	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g #10	ENSGT00390000003512.r.d #12	ENSGT00940000156048.e.b.a.b.b #13	ENSGT00390000011529 #14	ENSGT00940000153342.b.gb #16	ENSGT00940000158966.f #22	ENSGT00390000002789.j	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00940000158914.b	ENSGT00390000017614.e.a.a.b.a	ENSGT00390000017614.e.a.b	ENSGT00940000156166.b.a.b.b	ENSGT00940000153342.b.fb #16	ENSGT00940000158966.e #22	ENSGT00390000002789.i	ENSGT00980000199991	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b
Salmoninae_a	ANCESTRAL SPECIES	82	ENSGT00390000008848.k.b	ENSGT00940000157935.a.c	ENSGT00940000154406.c	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT01030000234599.a.a.ab.b	ENSGT00950000182787.A.a.d.a	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h #10	ENSGT00390000003512.r.c #12	ENSGT00940000156048.e.b.a.b.a #13	ENSGT00390000011529.i #14	ENSGT00940000153342.b.gb #16	ENSGT00940000158966.f #22	ENSGT00390000002789.j	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g #10	ENSGT00390000003512.r.d #12	ENSGT00940000156048.e.b.a.b.b #13	ENSGT00390000011529.j #14
Salmo	ANCESTRAL SPECIES	89	ENSGT00390000008848.k.b	ENSGT00940000157935.a.c	ENSGT00940000154406.c	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT01030000234599.a.a.ab.b	ENSGT00950000182787.A.a.d.a	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h #10	ENSGT00390000003512.r.c #12	ENSGT00940000156048.e.b.a.b.a #13	ENSGT00390000011529.i #14	ENSGT00940000153342.b.gb #16	ENSGT00940000158966.f #22	ENSGT00390000002789.j	ENSGT00980000199991	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.k.a	ENSGT00940000158914.b	ENSGT00390000017614.e.a.a.b.b	ENSGT00390000017614.e.a.a.b.a	ENSGT00390000017614.e.a.b	ENSGT00940000156166.b.a.b.b	ENSGT00940000153846.a.b.d	ENSGT00940000154912.v.e.b	ENSGT00940000165172.b.b	ENSGT00440000033742.a.b.c.a	ENSGT00390000016493.l
River trout	MODERN SPECIES	31	ENSSTUG00000050944	col9a1a (ENSSTUG00000050943)	ptp4a1 (ENSSTUG00000050940)	lgsn (ENSSTUG00000050939)	ENSSTUG00000050938	myom2a (ENSSTUG00000050872)	ENSSTUG00000050862	ENSSTUG00000050824	ENSSTUG00000050819	dla (ENSSTUG00000050813)	RHOU (ENSSTUG00000050811) #10	CCSAP (ENSSTUG00000050810) #12	ACTA1 (ENSSTUG00000050809) #13	nup133 (ENSSTUG00000050770) #14	taf5l (ENSSTUG00000050744) #16	capn9 (ENSSTUG00000050685) #22	ENSSTUG00000050678	ltv1 (ENSSTUG00000050676)	ENSSTUG00000050674	si:ch211-214c7.5 (ENSSTUG00000050671)	PKN1 (ENSSTUG00000049633)	map2k7 (ENSSTUG00000049495)	ENSSTUG00000049480	ENSSTUG00000049475	ENSSTUG00000049468	ENSSTUG00000049464	EVI5L (ENSSTUG00000049150)	DDX39A (ENSSTUG00000049071)	ENSSTUG00000049061	rab11fip4b (ENSSTUG00000049020)	utp6 (ENSSTUG00000048980)
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000097975	col9a1a (ENSSSAG00000086280)	TP4A1 (ENSSSAG00000090305)	lgsn (ENSSSAG00000057433)	ENSSSAG00000084744	myom2a (ENSSSAG00000103289)	ENSSSAG00000098659	ENSSSAG00000060153	ENSSSAG00000061984	dla (ENSSSAG00000062006)	RHOU (ENSSSAG00000062117) #10	ENSSSAG00000091165 #12	ACTA1 (ENSSSAG00000062181) #13	nup133 (ENSSSAG00000062572) #14	taf5l (ENSSSAG00000083268) #16	capn9 (ENSSSAG00000112435) #22	ltv1 (ENSSSAG00000064974)	ENSSSAG00000064981	ifngr1a (ENSSSAG00000064985)	si:ch211-214c7.5 (ENSSSAG00000064989)	ENSSSAG00000065025	map2k7 (ENSSSAG00000117266)	ENSSSAG00000004204	ENSSSAG00000086217	ENSSSAG00000096802	ENSSSAG00000121195	ENSSSAG00000004386	DDX39 (ENSSSAG00000005515)	rab11fip4b (ENSSSAG00000005542)	ENSSSAG00000112250	utp6 (ENSSSAG00000005694)
Oncorhynchus	ANCESTRAL SPECIES	42	ENSGT00390000008848.k.b	ENSGT00940000157935.a.c	ENSGT00940000154406.c.b	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT01030000234599.a.a.ab.b	ENSGT00950000182787.A.a.d.a	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h #10	ENSGT00390000003512.r.c #12	ENSGT00940000156048.e.b.a.b.a #13	ENSGT00390000011529.i #14	ENSGT00940000153342.b.gb #16	ENSGT00940000158966.f #22	ENSGT00390000002789.j	ENSGT00980000199991	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00940000158914.b	ENSGT00390000017614.e.a.b	ENSGT00970000193754.b.b.a	ENSGT00940000156166.b.a.b.b	ENSGT00940000153846.a.b.d	ENSGT00940000154912.v.f	ENSGT00940000154912.v.e.b.b	ENSGT00940000154912.v.e.b.a	ENSGT00940000165172.b.b	ENSGT00440000033742.a.b.c.a
Rainbow trout	MODERN SPECIES	4	mrpl4 (ENSOMYG00000041213)	ENSOMYG00000041204	col9a1a (ENSOMYG00000041196)	ptp4a1 (ENSOMYG00000041184)	lgsn (ENSOMYG00000041171)	ENSOMYG00000073173	myom2a (ENSOMYG00000040595)	ENSOMYG00000040188	ENSOMYG00000037304	ENSOMYG00000037025	ENSOMYG00000037014	CCSAP (ENSOMYG00000036990) #12	ENSOMYG00000036974 #13	nup133 (ENSOMYG00000036921) #14	taf5l (ENSOMYG00000036888) #16	capn9 (ENSOMYG00000035711) #22	ENSOMYG00000035511	ltv1 (ENSOMYG00000035505)	ENSOMYG00000055970	ENSOMYG00000035497	si:ch211-214c7.5 (ENSOMYG00000035470)	ENSOMYG00000035430	map2k7 (ENSOMYG00000035391)	ENSOMYG00000035342	ENSOMYG00000035326	ENSOMYG00000063635	LYG (ENSOMYG00000035259)	ENSOMYG00000035262	ENSOMYG00000065797	ENSOMYG00000035254	ENSOMYG00000063602
Oncorhynchus_a	ANCESTRAL SPECIES	38	ENSGT00390000008848.k.b	ENSGT00940000157935.a.c	ENSGT00940000154406.c.b	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT01030000234599.a.a.ab.b	ENSGT00950000182787.A.a.d.a	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h #10	ENSGT00390000003512.r.c #12	ENSGT00940000156048.e.b.a.b.a #13	ENSGT00390000011529.i #14	ENSGT00940000153342.b.gb #16	ENSGT00940000158966.f #22	ENSGT00390000002789.j	ENSGT00980000199991	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00940000158914.b	ENSGT00390000017614.e.a.b	ENSGT00970000193754.b.b.a	ENSGT00940000156166.b.a.b.b	ENSGT00940000153846.a.b.d	ENSGT00940000154912.v.f	ENSGT00940000154912.v.e.b.b	ENSGT00940000154912.v.e.b.a	ENSGT00940000165172.b.b	ENSGT00440000033742.a.b.c.a
Coho salmon	MODERN SPECIES	12	ENSOKIG00005007930	ENSOKIG00005007951	ptp4a1 (ENSOKIG00005007984)	lgsn (ENSOKIG00005008016)	ENSOKIG00005008026	myom2a (ENSOKIG00005008197)	ENSOKIG00005010677	ENSOKIG00005010859	ENSOKIG00005015709	dla (ENSOKIG00005015721)	RHOU (ENSOKIG00005015802) #10	CCSAP (ENSOKIG00005015809) #12	ACTA1 (ENSOKIG00005015821) #13	nup133 (ENSOKIG00005015893) #14	taf5l (ENSOKIG00005016639) #16	capn9 (ENSOKIG00005016690) #22	ltv1 (ENSOKIG00005017663)	ENSOKIG00005017706	ENSOKIG00005017725	si:ch211-214c7.5 (ENSOKIG00005017754)	PKN1 (ENSOKIG00005017942)	map2k7 (ENSOKIG00005022671)	ENSOKIG00005023105	ENSOKIG00005023123	ENSOKIG00005023134	EVI5L (ENSOKIG00005023215)	ENSOKIG00005023753	DDX39A (ENSOKIG00005023763)	DDX39A (ENSOKIG00005023816)	ENSOKIG00005024008	rab11fip4b (ENSOKIG00005024044)
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2905	ENSOTSG00005037463	ENSOTSG00005037465	ENSOTSG00005037466	ENSOTSG00005037469	ENSOTSG00005037472	ENSOTSG00005037474	ENSOTSG00005037476	ENSOTSG00005037477	ENSOTSG00005037478	ENSOTSG00005037480	map2k7 (ENSOTSG00005037481)	si:ch211-214c7.5 (ENSOTSG00005037695)	ENSOTSG00005037696	nup133 (ENSOTSG00005037698) #14	taf5l (ENSOTSG00005039678) #16	capn9 (ENSOTSG00005039702) #22	ltv1 (ENSOTSG00005041591)	ENSOTSG00005041596	ENSOTSG00005041598 #12	ACTA1 (ENSOTSG00005041599) #13	RHOU (ENSOTSG00005041605) #10	myom2a (ENSOTSG00005041633)	ENSOTSG00005042465	ENSOTSG00005042508	ENSOTSG00005045525	dla (ENSOTSG00005045526)	lgsn (ENSOTSG00005045527)	ENSOTSG00005045529	ENSOTSG00005045532	ptp4a1 (ENSOTSG00005045536)	mrpl4 (ENSOTSG00005045544)
Chinook salmon	MODERN SPECIES	2905	ENSOTSG00005037478	ENSOTSG00005037477	ENSOTSG00005037476	ENSOTSG00005037474	ENSOTSG00005037472	ENSOTSG00005037469	ENSOTSG00005037466	ENSOTSG00005037465	ENSOTSG00005037463	ENSOTSG00005037458	map2k7 (ENSOTSG00005037451)	si:ch211-214c7.5 (ENSOTSG00005037447)	ENSOTSG00005037446	nup133 (ENSOTSG00005036977) #14	taf5l (ENSOTSG00005036972) #16	capn9 (ENSOTSG00005035114) #22	ENSOTSG00005035110	ltv1 (ENSOTSG00005035109)	ENSOTSG00005035106 #12	ACTA1 (ENSOTSG00005035093) #13	ENSOTSG00005035090 #10	myom2a (ENSOTSG00005034874)	ENSOTSG00005034872	ENSOTSG00005024998	ENSOTSG00005024959	dla (ENSOTSG00005024937)	lgsn (ENSOTSG00005024934)	ENSOTSG00005024933	ENSOTSG00005024932	ptp4a1 (ENSOTSG00005024925)	mrpl4 (ENSOTSG00005024918)
Huchen	MODERN SPECIES	711	mrpl4 (ENSHHUG00000052821)	ENSHHUG00000052820	ENSHHUG00000052819	ptp4a1 (ENSHHUG00000052818)	lgsn (ENSHHUG00000052817)	ENSHHUG00000052816	myom2a (ENSHHUG00000052814)	ENSHHUG00000052653	ENSHHUG00000052646	dla (ENSHHUG00000052630)	RHOU (ENSHHUG00000052629) #10	CCSAP (ENSHHUG00000052628) #12	ACTA1 (ENSHHUG00000052533) #13	nup133 (ENSHHUG00000052521) #14	taf5l (ENSHHUG00000052519) #16	capn9 (ENSHHUG00000052385) #22	ltv1 (ENSHHUG00000052380)	ENSHHUG00000052379	si:ch211-214c7.5 (ENSHHUG00000052375)	PKN1 (ENSHHUG00000052328)	map2k7 (ENSHHUG00000052320)	ENSHHUG00000052319	ENSHHUG00000052318
Northern pike	MODERN SPECIES	8	ENSELUG00000010495	col9a1a (ENSELUG00000010517)	ptp4a1 (ENSELUG00000010545)	lgsn (ENSELUG00000010565)	ENSELUG00000010582	myom2a (ENSELUG00000010735)	ENSELUG00000010795	hk1 (ENSELUG00000010829)	ENSELUG00000010847	dla (ENSELUG00000010895)	RHOU (ENSELUG00000001495) #10	CCSAP (ENSELUG00000010931) #12	ACTA1 (ENSELUG00000001139) #13	nup133 (ENSELUG00000010985) #14	taf5l (ENSELUG00000011004) #16	capn9 (ENSELUG00000011036) #22	ltv1 (ENSELUG00000001496)	ENSELUG00000011057	ENSELUG00000029931	si:ch211-214c7.5 (ENSELUG00000011125)	PKN1 (ENSELUG00000011325)	map2k7 (ENSELUG00000011409)	ENSELUG00000011448	esf1 (ENSELUG00000000408)	ndufaf5 (ENSELUG00000000412)	ENSELUG00000025581	KIF16B (ENSELUG00000011722)	snrpb2 (ENSELUG00000011788)	prokr1a (ENSELUG00000011801)	ENSELUG00000033337	ENSELUG00000030123
Acanthomorphata	ANCESTRAL SPECIES	78	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT00940000167432
Cod	MODERN SPECIES	16	ENSGMOG00000007063	mrpl4 (ENSGMOG00000007229)	ENSGMOG00000007236	ptp4a1 (ENSGMOG00000007574)	lgsn (ENSGMOG00000007602)	ENSGMOG00000007616	myom2a (ENSGMOG00000036481)	HK1a (ENSGMOG00000005415)	ENSGMOG00000028619	dla (ENSGMOG00000005389)	RHOU (ENSGMOG00000005380) #10	ENSGMOG00000033926 #12	ACTA1 (ENSGMOG00000028074) #13	nup133 (ENSGMOG00000032428) #14	taf5l (ENSGMOG00000005310) #16	capn9 (ENSGMOG00000005292) #22	ltv1 (ENSGMOG00000005158)	ENSGMOG00000022819	ENSGMOG00000022728	ENSGMOG00000028727	ENSGMOG00000004973	ENSGMOG00000023954	pus10 (ENSGMOG00000004805)	cct4 (ENSGMOG00000004621)	ENSGMOG00000026606	ENSGMOG00000004607	XPO1 (ENSGMOG00000004441)	USP34 (ENSGMOG00000035113)	ENSGMOG00000026375	ENSGMOG00000019501	ENSGMOG00000019498
Euacanthomorphacea	ANCESTRAL SPECIES	37	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601
Pinecone sodierfish	MODERN SPECIES		ENSMMDG00005019588	mrpl4 (ENSMMDG00005019545)	ENSMMDG00005019536	ptp4a1 (ENSMMDG00005019498)	lgsn (ENSMMDG00005019491)	ENSMMDG00005019488	myom2a (ENSMMDG00005019483)	hk1 (ENSMMDG00005019477)	ENSMMDG00005019476	dla (ENSMMDG00005019474)	RHOU (ENSMMDG00005019473) #10	CCSAP (ENSMMDG00005019471) #12	ACTA1 (ENSMMDG00005019469) #13	nup133 (ENSMMDG00005017713) #14	taf5l (ENSMMDG00005017691) #16	capn9 (ENSMMDG00005017687) #22	ENSMMDG00005017685	ltv1 (ENSMMDG00005017677)	ENSMMDG00005017674	ENSMMDG00005017671	ENSMMDG00005017022	ENSMMDG00005012208	pus10 (ENSMMDG00005012020)	cct4 (ENSMMDG00005011867)	ENSMMDG00005011860	XPO1 (ENSMMDG00005011834)	USP34 (ENSMMDG00005010790)	ENSMMDG00005010738	ENSMMDG00005010735	commd1 (ENSMMDG00005010733)	b3gnt2a (ENSMMDG00005010730)
Percomorphaceae	ANCESTRAL SPECIES	37	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a #10	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601
Tiger tail seahorse	MODERN SPECIES	106			ENSHCOG00000020363	ENSHCOG00000020379 #10	dla (ENSHCOG00000020390)	ZBTB45 (ENSHCOG00000020415)	hk1 (ENSHCOG00000020441)	ENSHCOG00000020782	myom2a (ENSHCOG00000020868)	lgsn (ENSHCOG00000020893)	ptp4a1 (ENSHCOG00000020907)	ENSHCOG00000020932	ENSHCOG00000020941	vps54 (ENSHCOG00000021036)	taf5l (ENSHCOG00000021046) #16	capn9 (ENSHCOG00000021059) #22	ENSHCOG00000021081	ltv1 (ENSHCOG00000001882)	ENSHCOG00000000059	cdc6 (ENSHCOG00000001908)	zgc:77929 (ENSHCOG00000001924)	ENSHCOG00000001927	npepps (ENSHCOG00000001944)	mrpl45 (ENSHCOG00000001966)	ENSHCOG00000000062	socs7 (ENSHCOG00000001990)	sp2 (ENSHCOG00000002002)	ENSHCOG00000002009	ENSHCOG00000002014	mrpl4 (ENSHCOG00000002016)	ENSHCOG00000002027
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601
Ovalentaria	ANCESTRAL SPECIES		ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT00940000167432	ENSGT00530000063410.a.q.b
Atherinomorphae	ANCESTRAL SPECIES	46	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00390000008848	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22
Aplocheiloidei	ANCESTRAL SPECIES	306												ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22
Mangrove rivulus	MODERN SPECIES	503														nup133 (ENSKMAG00000010784) #14	taf5l (ENSKMAG00000010823) #16	capn9 (ENSKMAG00000010846) #22
Turquoise killifish	MODERN SPECIES	1617	map2k7 (ENSNFUG00015023878)	ENSNFUG00015023858	ENSNFUG00015023837	vegfc (ENSNFUG00015023829)	ENSNFUG00015023826	ENSNFUG00015023825	ENSNFUG00015023717	dctd (ENSNFUG00015023704)	ENSNFUG00015023701	ENSNFUG00015023698	FBXO8 (ENSNFUG00015023694)	KCNH1 (ENSNFUG00015023684)	ENSNFUG00015023678	rcor3 (ENSNFUG00015023643)	TAF5L (ENSNFUG00015023630) #16	capn9 (ENSNFUG00015023606) #22	COMMD1 (ENSNFUG00015023593)	ENSNFUG00015023583	ENSNFUG00015023575	otx2a (ENSNFUG00015023572)	MDH1 (ENSNFUG00015023534)	ugp2a (ENSNFUG00015023325)	vps54 (ENSNFUG00015023231)	PELI1A (ENSNFUG00015023219)	slc29a2 (ENSNFUG00015023212)	LGALSLA (ENSNFUG00015023207)	TMEM246 (ENSNFUG00015023205)	TPC3 (ENSNFUG00015023162)	TTBK1 (ENSNFUG00015023144)	ENSNFUG00015023110	Nfu_g_1_013649 (ENSNFUG00015023104)
Cyprinodontoidei	ANCESTRAL SPECIES	41	ENSGT00390000008848	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT01100000263505.b.b.a.a.a.b.f
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00390000008848	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT01100000263491.a.b.a.a.a.b.a	ENSGT00950000183012.A.b	ENSGT00610000087490	ENSGT00510000052942	ENSGT01030000234627.a.b.a.a.b.a	ENSGT00940000155484.b	ENSGT00390000009223	ENSGT00940000159851	ENSGT00940000158105	ENSGT00390000013419	ENSGT00940000156950.b	ENSGT00940000156344.a	ENSGT00390000003049.b.a	ENSGT00940000174164	ENSGT01050000244806.b.b
Poecilia	ANCESTRAL SPECIES	6	ENSGT00390000008848	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT01100000263505.b.b.a.a.a.b.f	ENSGT00940000157046.D.c.a.a.a.b.a.b	ENSGT01100000263489.a.a.b.a.a.b.a.b	ENSGT00390000018319.b.b	ENSGT00940000163854.a.b	ENSGT00550000075028	ENSGT00940000168606	ENSGT00530000063760.b.g.b	ENSGT00950000182907.a.a.ic.a	ENSGT00940000167560	ENSGT00390000009895	ENSGT00940000160112	ENSGT00940000165419.b	ENSGT00390000000698	ENSGT01050000244970.a
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	78	ENSGT00390000014512	ENSGT00940000154902	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966.g #22	ENSGT01100000263505.b.b.a.a.a.b.f	ENSGT00990000210217	ENSGT00950000183012.A.b	ENSGT00610000087490	ENSGT00510000052942	ENSGT01030000234627.a.b.a.a.b.a	ENSGT00940000155484.b	ENSGT00390000009223	ENSGT00940000159851	ENSGT00940000158105	ENSGT00390000013419	ENSGT00940000156950.b	ENSGT00940000156344.a	ENSGT00390000003049.b.a	ENSGT00940000174164
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	3963																ENSPLAG00000016251 #22	ENSPLAG00000016258
Sailfin molly	MODERN SPECIES	3879																ENSPLAG00000009434 #22	ENSPLAG00000009442
Amazon molly	MODERN SPECIES	608	mrpl4 (ENSPFOG00000013329)	ENSPFOG00000024740	ENSPFOG00000013118	sp2 (ENSPFOG00000013068)	socs7 (ENSPFOG00000013037)	ENSPFOG00000012987	mrpl45 (ENSPFOG00000012935)	npepps (ENSPFOG00000012738)	zgc:77929 (ENSPFOG00000020121)	mrpl21 (ENSPFOG00000020119)	WIPF2 (ENSPFOG00000024468)	cdc6 (ENSPFOG00000012621)	ENSPFOG00000012606 #12	nup133 (ENSPFOG00000012316) #14	taf5l (ENSPFOG00000012282) #16	capn9 (ENSPFOG00000011782) #22	ENSPFOG00000021943	ENSPFOG00000011766	ENSPFOG00000023038	vps37c (ENSPFOG00000011741)	ENSPFOG00000011739	ENSPFOG00000011737	kdm2aa (ENSPFOG00000021921)	stx3a (ENSPFOG00000011733)	kdm2aa (ENSPFOG00000011570)	spcs3 (ENSPFOG00000011540)	ENSPFOG00000011538	galnt7 (ENSPFOG00000011390)	saraf (ENSPFOG00000011356)
NAME_6	ANCESTRAL SPECIES																	ENSGT00940000158966.h #22
Sailfin molly	MODERN SPECIES	2917														nup133 (ENSPLAG00000020753) #14	taf5l (ENSPLAG00000020779) #16	capn9 (ENSPLAG00000020791) #22
Guppy	MODERN SPECIES	439	mrpl4 (ENSPREG00000021621)	ENSPREG00000021685	sp2 (ENSPREG00000021712)	socs7 (ENSPREG00000021721)	ENSPREG00000021735	mrpl45 (ENSPREG00000021754)	npepps (ENSPREG00000021780)	zgc:77929 (ENSPREG00000021796)	ENSPREG00000021801	mrpl21 (ENSPREG00000021810)	WIPF2 (ENSPREG00000021819)	cdc6 (ENSPREG00000021828)	ENSPREG00000021843 #12	nup133 (ENSPREG00000021865) #14	taf5l (ENSPREG00000021901) #16	capn9 (ENSPREG00000021911) #22	ENSPREG00000021924	vps37c (ENSPREG00000021926)	ENSPREG00000021934	stx3a (ENSPREG00000021940)	kdm2aa (ENSPREG00000021962)	spcs3 (ENSPREG00000021991)	ENSPREG00000021996	galnt7 (ENSPREG00000022007)	ENSPREG00000022021	GRIA2 (ENSPREG00000022050)	glrba (ENSPREG00000022117)	ndufs8a (ENSPREG00000022139)	ENSPREG00000022154	ENSPREG00000022169	hand2 (ENSPREG00000022192)
Platyfish	MODERN SPECIES	19	mrpl4 (ENSXMAG00000030102)	ENSXMAG00000023544	ENSXMAG00000009446	sp2 (ENSXMAG00000014321)	socs7 (ENSXMAG00000014313)	ENSXMAG00000022613	mrpl45 (ENSXMAG00000014301)	npepps (ENSXMAG00000014198)	zgc:77929 (ENSXMAG00000020296)	mrpl21 (ENSXMAG00000020294)	WIPF2 (ENSXMAG00000014184)	cdc6 (ENSXMAG00000014169)	ENSXMAG00000029289 #12	nup133 (ENSXMAG00000014130) #14	taf5l (ENSXMAG00000023303) #16	capn9 (ENSXMAG00000016015) #22	ENSXMAG00000028364	vps37c (ENSXMAG00000016009)	ENSXMAG00000016005	stx3a (ENSXMAG00000028936)	kdm2aa (ENSXMAG00000015985)	spcs3 (ENSXMAG00000015996)	ASB5 (ENSXMAG00000015975)	galnt7 (ENSXMAG00000015957)	saraf (ENSXMAG00000015951)	GRIA2 (ENSXMAG00000015901)	glrba (ENSXMAG00000015884)	ndufs8a (ENSXMAG00000015877)	ENSXMAG00000015875	si:dkey-102c8.3 (ENSXMAG00000015872)	hand2 (ENSXMAG00000023432)
NAME_4	ANCESTRAL SPECIES	74	ENSGT00390000008848	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22
Mummichog	MODERN SPECIES	2270	ENSFHEG00000003112	mrpl4 (ENSFHEG00000003126)	ENSFHEG00000003161	sp2 (ENSFHEG00000003176)	socs7 (ENSFHEG00000003189)	ENSFHEG00000003212	mrpl45 (ENSFHEG00000003230)	npepps (ENSFHEG00000003285)	zgc:77929 (ENSFHEG00000000093)	mrpl21 (ENSFHEG00000003319)	ENSFHEG00000000889	cdc6 (ENSFHEG00000003348)	ENSFHEG00000003366 #12	nup133 (ENSFHEG00000003388) #14	taf5l (ENSFHEG00000003396) #16	capn9 (ENSFHEG00000003416) #22	ENSFHEG00000003423	ENSFHEG00000003428	ENSFHEG00000003444	ENSFHEG00000003479
Oryzias	ANCESTRAL SPECIES	34	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22
Oryzias_b	ANCESTRAL SPECIES	36	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000157476	ENSGT00950000182803.A.a.b.k.a.a	ENSGT00940000163566.a.b.a.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000165172.b	ENSGT00940000154912.u.a	ENSGT00940000153846.a.b	ENSGT00390000017614.e.a.e.a	ENSGT00940000158718.a.a	ENSGT00950000183036.b.e	ENSGT01030000234900	ENSGT00390000009916	ENSGT00940000154990.fb.a.e	ENSGT00940000158914	ENSGT00940000155632.p
Indian medaka	MODERN SPECIES	48		ENSOMEG00000014216	sp2 (ENSOMEG00000014260)	socs7 (ENSOMEG00000014306)	ENSOMEG00000014331	mrpl45 (ENSOMEG00000014348)	npepps (ENSOMEG00000014391)	zgc:77929 (ENSOMEG00000014405)	MRPL21 (ENSOMEG00000014420)	ENSOMEG00000014441	cdc6 (ENSOMEG00000014493)	CCSAP (ENSOMEG00000014519) #12	ACTA1 (ENSOMEG00000014560) #13	nup133 (ENSOMEG00000014612) #14	taf5l (ENSOMEG00000014627) #16	capn9 (ENSOMEG00000014725) #22	ENSOMEG00000014751	ENSOMEG00000014762	ENSOMEG00000014776	ENSOMEG00000014788	ENSOMEG00000014803	ENSOMEG00000014815	zeb2a (ENSOMEG00000014917)	gtdc1 (ENSOMEG00000014991)	ENSOMEG00000015032	ENSOMEG00000015111	tp53rk (ENSOMEG00000015137)	ENSOMEG00000015162
Javanese ricefish	MODERN SPECIES		mrpl4 (ENSOJAG00000000204)	ENSOJAG00000000195	ENSOJAG00000000116	sp2 (ENSOJAG00000018969)	socs7 (ENSOJAG00000018901)	ENSOJAG00000018767	mrpl45 (ENSOJAG00000018748)	MRPL21 (ENSOJAG00000018424)	ENSOJAG00000018403	cdc6 (ENSOJAG00000018306)	CCSAP (ENSOJAG00000018296) #12	ENSOJAG00000018276 #13	ENSOJAG00000018258	nup133 (ENSOJAG00000017093) #14	taf5l (ENSOJAG00000017027) #16	capn9 (ENSOJAG00000016557) #22	ENSOJAG00000016496	ENSOJAG00000016480	ENSOJAG00000016476	ENSOJAG00000016444	ENSOJAG00000016431	ENSOJAG00000016397	ENSOJAG00000016363	ENSOJAG00000016350	ENSOJAG00000016343	ENSOJAG00000016332	ENSOJAG00000016305	ENSOJAG00000016296	ENSOJAG00000016278	ENSOJAG00000016257	ENSOJAG00000016236
Oryzias_a	ANCESTRAL SPECIES	59	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000154847.m	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b.g	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22
Chinese medaka	MODERN SPECIES	728													cdc6 (ENSOSIG00000013252)	ENSOSIG00000013282 #12	ACTA1 (ENSOSIG00000013283) #13	capn9 (ENSOSIG00000013381) #22
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000025721	mrpl45 (ENSORLG00000000106)	npepps (ENSORLG00000000111)	zgc:77929 (ENSORLG00000000119)	MRPL21 (ENSORLG00000000120)	ENSORLG00000000122	ENSORLG00000030145	ENSORLG00000030263	ENSORLG00000025152	ENSORLG00000030207	cdc6 (ENSORLG00000000130)	CCSAP (ENSORLG00000028631) #12	ACTA1 (ENSORLG00000000136) #13	nup133 (ENSORLG00000000146) #14	taf5l (ENSORLG00000027732) #16	capn9 (ENSORLG00000019722) #22	ENSORLG00000000159	ENSORLG00000027939	ENSORLG00000003087	ENSORLG00000028923	ENSORLG00000022814	ENSORLG00000028479	ENSORLG00000028221	ENSORLG00000025208	ENSORLG00000028263	ENSORLG00000026807	ENSORLG00000023055	ENSORLG00000030575	ENSORLG00000022228	ENSORLG00000026973	ENSORLG00000026274
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a
Nile tilapia	MODERN SPECIES	18	ENSONIG00000000119	sp2 (ENSONIG00000000117)	socs7 (ENSONIG00000039565)	ENSONIG00000000109	mrpl45 (ENSONIG00000000107)	npepps (ENSONIG00000000102)	zgc:77929 (ENSONIG00000020700)	MRPL21 (ENSONIG00000020699)	WIPF2 (ENSONIG00000000073)	cdc6 (ENSONIG00000000068)	ENSONIG00000024001 #12	ENSONIG00000017072 #13	ENSONIG00000031717	nup133 (ENSONIG00000000063) #14	taf5l (ENSONIG00000042576) #16	capn9 (ENSONIG00000000043) #22	ltv1 (ENSONIG00000000042)	ifngr1 (ENSONIG00000000041)	ENSONIG00000000863	pus10 (ENSONIG00000000036)	cct4 (ENSONIG00000000029)	ENSONIG00000029539	ENSONIG00000031693	XPO1 (ENSONIG00000000019)	vegfc (ENSONIG00000020065)	ENSONIG00000027232	ENSONIG00000029018	ENSONIG00000034718	ENSONIG00000042250	ENSONIG00000036356	ENSONIG00000010902
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	33	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT01020000231800	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b
Haplochromini	ANCESTRAL SPECIES	52	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT01020000231800	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT01080000258336	ENSGT00940000167432	ENSGT00530000063410.a.q.b
Burton s mouthbrooder	MODERN SPECIES	667	ENSHBUG00000006348	sp2 (ENSHBUG00000006406)	socs7 (ENSHBUG00000006426)	ENSHBUG00000006440	mrpl45 (ENSHBUG00000006458)	npepps (ENSHBUG00000006519)	zgc:77929 (ENSHBUG00000006545)	ENSHBUG00000006577	WIPF2 (ENSHBUG00000006603)	ENSHBUG00000006612	cdc6 (ENSHBUG00000000811)	CCSAP (ENSHBUG00000006759) #12	ENSHBUG00000006776 #13	nup133 (ENSHBUG00000006828) #14	taf5l (ENSHBUG00000000737) #16	capn9 (ENSHBUG00000006906) #22	ENSHBUG00000006920	ltv1 (ENSHBUG00000006953)	ifngr1 (ENSHBUG00000006960)	ENSHBUG00000006995	pus10 (ENSHBUG00000007009)	cct4 (ENSHBUG00000007056)	FAM161A (ENSHBUG00000007077)	XPO1 (ENSHBUG00000007128)	USP34 (ENSHBUG00000007260)
Haplochromini_A	ANCESTRAL SPECIES	59	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT01020000231800	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a
P. nyererei	MODERN SPECIES	616	ENSPNYG00000023503	sp2 (ENSPNYG00000023501)	socs7 (ENSPNYG00000023497)	ENSPNYG00000023492	mrpl45 (ENSPNYG00000023490)	npepps (ENSPNYG00000023488)	ENSPNYG00000023486	zgc:77929 (ENSPNYG00000023484)	WIPF2 (ENSPNYG00000023483)	ENSPNYG00000023481	cdc6 (ENSPNYG00000023479)	ENSPNYG00000023478 #12	ENSPNYG00000023477 #13	nup133 (ENSPNYG00000023475) #14	taf5l (ENSPNYG00000023473) #16	capn9 (ENSPNYG00000023471) #22	ENSPNYG00000023470	ltv1 (ENSPNYG00000023469)	ifngr1 (ENSPNYG00000023468)	ENSPNYG00000023467	pus10 (ENSPNYG00000023466)	cct4 (ENSPNYG00000023465)	ENSPNYG00000023464	XPO1 (ENSPNYG00000023463)	USP34 (ENSPNYG00000023460)
Haplochromini_B	ANCESTRAL SPECIES	47	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT01020000231800	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000264738.a	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT01100000263559.A	ENSGT01100000263514.A.e.a	ENSGT01060000248528.b.we.a	ENSGT00950000183089.c.a.k.a.sb.a	ENSGT00990000203553.c.a.b
Zebra mbuna	MODERN SPECIES	1109	ENSMZEG00005005711	sp2 (ENSMZEG00005005694)	socs7 (ENSMZEG00005005686)	ENSMZEG00005005586	mrpl45 (ENSMZEG00005005556)	npepps (ENSMZEG00005005520)	zgc:77929 (ENSMZEG00005005509)	ENSMZEG00005005496	WIPF2 (ENSMZEG00005005474)	ENSMZEG00005005463	cdc6 (ENSMZEG00005005448)	CCSAP (ENSMZEG00005005439) #12	ENSMZEG00005005426 #13	nup133 (ENSMZEG00005005378) #14	taf5l (ENSMZEG00005005370) #16	capn9 (ENSMZEG00005005346) #22	ENSMZEG00005005327	ltv1 (ENSMZEG00005005315)	ifngr1 (ENSMZEG00005005285)	ENSMZEG00005005275	ENSMZEG00005005260	ENSMZEG00005005230	pus10 (ENSMZEG00005005211)	cct4 (ENSMZEG00005005184)	FAM161A (ENSMZEG00005005167)	XPO1 (ENSMZEG00005005105)	USP34 (ENSMZEG00005005014)	ENSMZEG00005004765	ENSMZEG00005004064	ENSMZEG00005003954	ENSMZEG00005003650
Eastern happy	MODERN SPECIES	18	ENSACLG00000016925	sp2 (ENSACLG00000016868)	socs7 (ENSACLG00000016817)	ENSACLG00000016799	mrpl45 (ENSACLG00000016765)	npepps (ENSACLG00000016681)	zgc:77929 (ENSACLG00000016671)	ENSACLG00000016665	WIPF2 (ENSACLG00000016646)	ENSACLG00000016574	cdc6 (ENSACLG00000016546)	CCSAP (ENSACLG00000016519) #12	ENSACLG00000016473 #13	nup133 (ENSACLG00000016342) #14	taf5l (ENSACLG00000016330) #16	capn9 (ENSACLG00000016284) #22	ENSACLG00000016277	ltv1 (ENSACLG00000016248)	ENSACLG00000016176	ENSACLG00000016161	ENSACLG00000016143	ENSACLG00000016107	pus10 (ENSACLG00000015870)	cct4 (ENSACLG00000015808)	ENSACLG00000015802	ENSACLG00000015773	ENSACLG00000015748	XPO1 (ENSACLG00000015669)	USP34 (ENSACLG00000015410)	ENSACLG00000015308	ENSACLG00000015194
Lyretail cichlid	MODERN SPECIES	443	mrpl4 (ENSNBRG00000004804)	ENSNBRG00000004758	ENSNBRG00000004583	sp2 (ENSNBRG00000004524)	socs7 (ENSNBRG00000004489)	ENSNBRG00000004376	mrpl45 (ENSNBRG00000004354)	npepps (ENSNBRG00000004278)	zgc:77929 (ENSNBRG00000004263)	mrpl21 (ENSNBRG00000004248)	ENSNBRG00000004226	ENSNBRG00000004202	ENSNBRG00000004190 #13	nup133 (ENSNBRG00000004141) #14	taf5l (ENSNBRG00000004107) #16	capn9 (ENSNBRG00000004057) #22	ENSNBRG00000004039	ltv1 (ENSNBRG00000004014)	ENSNBRG00000003991	ENSNBRG00000003970	ENSNBRG00000003948	ENSNBRG00000003929	cct4 (ENSNBRG00000003889)	ENSNBRG00000003879	ENSNBRG00000003859	XPO1 (ENSNBRG00000003776)	USP34 (ENSNBRG00000003600)	ENSNBRG00000003582
Midas cichlid	MODERN SPECIES	415	ENSACIG00000011672	sp2 (ENSACIG00000011751)	socs7 (ENSACIG00000011768)	ENSACIG00000011879	mrpl45 (ENSACIG00000011923)	npepps (ENSACIG00000012041)	MRPL21 (ENSACIG00000012089)	zgc:77929 (ENSACIG00000012106)	WIPF2 (ENSACIG00000012113)	ENSACIG00000012130	cdc6 (ENSACIG00000012154)	CCSAP (ENSACIG00000012200) #12	ACTA1 (ENSACIG00000012219) #13	nup133 (ENSACIG00000012243) #14	taf5l (ENSACIG00000012293) #16	capn9 (ENSACIG00000012362) #22	ltv1 (ENSACIG00000012505)	ENSACIG00000012524	ENSACIG00000012541	ENSACIG00000012558
Pomacentridae	ANCESTRAL SPECIES	67	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b
Pomacentridae_A	ANCESTRAL SPECIES	149	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00730000111912.A.b	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736
Spiny chromis	MODERN SPECIES	2382																capn9 (ENSAPOG00000006726) #22	ENSAPOG00000006749	ltv1 (ENSAPOG00000006767)	ENSAPOG00000006807
Amphiprion	ANCESTRAL SPECIES	93	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00730000111912.A.b	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000160772	ENSGT00940000158356	ENSGT00390000009873	ENSGT00940000153676.a	ENSGT01030000234566.e.b.a.a.a.a	ENSGT00940000156167.b	ENSGT00390000004697	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT01100000263495.A.a.a	ENSGT00390000010980	ENSGT00390000013419	ENSGT00940000158105
Clown anemonefish	MODERN SPECIES	764														ENSAOCG00000011736	taf5l (ENSAOCG00000011766) #16	capn9 (ENSAOCG00000011801) #22	ENSAOCG00000002332	ltv1 (ENSAOCG00000011907)	ENSAOCG00000011954	hand2 (ENSAOCG00000011989)	fbxo8 (ENSAOCG00000012018)	cep44 (ENSAOCG00000012043)	dctd (ENSAOCG00000012087)
Orange clownfish	MODERN SPECIES	17	socs7 (ENSAPEG00000006016)	ENSAPEG00000005753	mrpl45 (ENSAPEG00000005671)	npepps (ENSAPEG00000005556)	zgc:77929 (ENSAPEG00000005535)	MRPL21 (ENSAPEG00000005507)	WIPF2 (ENSAPEG00000005487)	cdc6 (ENSAPEG00000005384)	cdc6 (ENSAPEG00000005339)	CCSAP (ENSAPEG00000005321) #12	ACTA1 (ENSAPEG00000005287) #13	nup133 (ENSAPEG00000005220) #14	ENSAPEG00000005183	ENSAPEG00000005156	taf5l (ENSAPEG00000005137) #16	capn9 (ENSAPEG00000005095) #22	ENSAPEG00000005070	ltv1 (ENSAPEG00000005031)	ENSAPEG00000004997	hand2 (ENSAPEG00000004952)	ENSAPEG00000004928	dctd (ENSAPEG00000004901)	fbxo8 (ENSAPEG00000004845)	ENSAPEG00000004816	dctd (ENSAPEG00000004793)	TENM3 (ENSAPEG00000004567)	ENSAPEG00000004485	ENSAPEG00000004475	vegfc (ENSAPEG00000004465)	ENSAPEG00000004453	ENSAPEG00000004442
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00990000213804	ENSGT00390000012029
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00990000213804	ENSGT00390000012029
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00990000213804	ENSGT00390000012029
Anabantoidei	ANCESTRAL SPECIES		ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00730000111912.A.b	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000012029	ENSGT00940000155345.r
Siamese fighting fish	MODERN SPECIES		capn2l (ENSBSLG00000000372)	AARS2 (ENSBSLG00000000173)	alg13 (ENSBSLG00000000153)	EOLA1 (ENSBSLG00000000145)	ENSBSLG00000000138	ENSBSLG00000000105	ENSBSLG00000013007	ENSBSLG00000012999	cdc6 (ENSBSLG00000012989)	ENSBSLG00000012986 #12	nup133 (ENSBSLG00000012963) #14	ENSBSLG00000012958	taf5l (ENSBSLG00000012955) #16	ltv1 (ENSBSLG00000012949)	ENSBSLG00000012948	capn9 (ENSBSLG00000012895) #22	ltv1 (ENSBSLG00000012938)	ENSBSLG00000012879	ENSBSLG00000012872	ENSBSLG00000012860	ENSBSLG00000012857	ENSBSLG00000012725	cct4 (ENSBSLG00000012636)	ENSBSLG00000012633	ENSBSLG00000012630	XPO1 (ENSBSLG00000012551)	ENSBSLG00000011995	ENSBSLG00000011986	ENSBSLG00000011968	commd1 (ENSBSLG00000011953)	b3gnt2a (ENSBSLG00000011947)
Climbing perch	MODERN SPECIES		socs7 (ENSATEG00000021418)	ENSATEG00000021381	mrpl45 (ENSATEG00000021376)	ENSATEG00000021341	ENSATEG00000021334	ENSATEG00000021329	ENSATEG00000021316	ENSATEG00000021308	CCSAP (ENSATEG00000021301) #12	ENSATEG00000025751 #13	NUP133 (ENSATEG00000021277) #14	ENSATEG00000027343	ENSATEG00000021267	ENSATEG00000021142	taf5l (ENSATEG00000021115) #16	capn9 (ENSATEG00000021071) #22	ENSATEG00000021050	ltv1 (ENSATEG00000021021)	ENSATEG00000020976	ENSATEG00000020958	ENSATEG00000020948	ENSATEG00000020899	pus10 (ENSATEG00000020874)	cct4 (ENSATEG00000020835)	ENSATEG00000027273	ENSATEG00000020812	XPO1 (ENSATEG00000020750)	USP34 (ENSATEG00000020612)	ENSATEG00000020587	ENSATEG00000029099	ENSATEG00000027244
Zig-zag eel	DUPLICATION
Zig-zag eel	DUPLICATION
Zig-zag eel	MODERN SPECIES		ENSMAMG00000001635	sp2 (ENSMAMG00000001599)	socs7 (ENSMAMG00000001564)	ENSMAMG00000001264	mrpl45 (ENSMAMG00000001198)	ENSMAMG00000001101	ENSMAMG00000001090	ENSMAMG00000001083	ENSMAMG00000001060	ENSMAMG00000026036	ENSMAMG00000000944	ENSMAMG00000026893	ENSMAMG00000000898	nup133 (ENSMAMG00000025208) #14	ENSMAMG00000024631	capn9 (ENSMAMG00000000620) #22	ltv1 (ENSMAMG00000026973)	ENSMAMG00000000550	ENSMAMG00000000519	ENSMAMG00000000510	ENSMAMG00000000476	ENSMAMG00000000385	pus10 (ENSMAMG00000023048)	cct4 (ENSMAMG00000023044)	ENSMAMG00000023042	ENSMAMG00000024634	XPO1 (ENSMAMG00000023037)	USP34 (ENSMAMG00000023021)	ENSMAMG00000023018	ENSMAMG00000025622	commd1 (ENSMAMG00000027465)
Zig-zag eel	MODERN SPECIES	48										ENSMAMG00000013722	ENSMAMG00000013699	ENSMAMG00000013653	ENSMAMG00000000883 #12	nup133 (ENSMAMG00000027155) #14	taf5l (ENSMAMG00000013461) #16	capn9 (ENSMAMG00000027156) #22	taf5l (ENSMAMG00000013440) #16	capn9 (ENSMAMG00000013396) #22	ENSMAMG00000013388	ltv1 (ENSMAMG00000027376)	ENSMAMG00000024734
Zig-zag eel	MODERN SPECIES	48								ENSMAMG00000013722	ENSMAMG00000013699	ENSMAMG00000013653	ENSMAMG00000000883 #12	nup133 (ENSMAMG00000027155) #14	taf5l (ENSMAMG00000013461) #16	capn9 (ENSMAMG00000027156) #22	taf5l (ENSMAMG00000013440) #16	capn9 (ENSMAMG00000013396) #22	ENSMAMG00000013388	ltv1 (ENSMAMG00000027376)	ENSMAMG00000024734
Carangaria	ANCESTRAL SPECIES		ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000018035	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601
Carangaria_A	ANCESTRAL SPECIES	42	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000018035	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601
Seriola	ANCESTRAL SPECIES	112	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT01090000260226	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878
Greater amberjack	MODERN SPECIES	230	zgc:77929 (ENSSDUG00000001546)	ENSSDUG00000001524	WIPF2 (ENSSDUG00000001468)	ENSSDUG00000001460	ENSSDUG00000001457	ENSSDUG00000001443	ENSSDUG00000001421	ENSSDUG00000001406	cdc6 (ENSSDUG00000001387)	CCSAP (ENSSDUG00000001376) #12	ACTA1 (ENSSDUG00000001343) #13	nup133 (ENSSDUG00000001241) #14	ENSSDUG00000001224	ENSSDUG00000001208	taf5l (ENSSDUG00000001201) #16	capn9 (ENSSDUG00000001187) #22	ENSSDUG00000001156	ltv1 (ENSSDUG00000001140)	ENSSDUG00000001131	ENSSDUG00000001110	ENSSDUG00000001098	ENSSDUG00000001039	pus10 (ENSSDUG00000001017)	cct4 (ENSSDUG00000000959)	FAM161A (ENSSDUG00000000917)	ENSSDUG00000000894	XPO1 (ENSSDUG00000000812)	USP34 (ENSSDUG00000000583)	ENSSDUG00000000549	ENSSDUG00000000508	ENSSDUG00000000491
Yellowtail amberjack	MODERN SPECIES	2892														ENSSLDG00000016723	taf5l (ENSSLDG00000016733) #16	capn9 (ENSSLDG00000016758) #22	ltv1 (ENSSLDG00000016826)	ENSSLDG00000016886	ENSSLDG00000016911	ENSSLDG00000016948	ENSSLDG00000016961	pus10 (ENSSLDG00000017034)	cct4 (ENSSLDG00000017287)	FAM161A (ENSSLDG00000017357)	XPO1 (ENSSLDG00000017381)	XPO1 (ENSSLDG00000017407)	USP34 (ENSSLDG00000017444)
Barramundi perch	MODERN SPECIES	62								ENSLCAG00010027651	ENSLCAG00010027654	cdc6 (ENSLCAG00010027655)	CCSAP (ENSLCAG00010027656) #12	ACTA1 (ENSLCAG00010027669) #13	nup133 (ENSLCAG00010027695) #14	ENSLCAG00010027704	taf5l (ENSLCAG00010027706) #16	capn9 (ENSLCAG00010027707) #22	ltv1 (ENSLCAG00010027708)	ENSLCAG00010027709	ENSLCAG00010027710	cct4 (ENSLCAG00010027712)	ENSLCAG00010027715	ENSLCAG00010027720	ENSLCAG00010027721	XPO1 (ENSLCAG00010027722)	USP34 (ENSLCAG00010027723)	ENSLCAG00010027726	commd1 (ENSLCAG00010027727)	b3gnt2a (ENSLCAG00010027728)	ENSLCAG00010027729	otx2a (ENSLCAG00010027730)	mdh1aa (ENSLCAG00010027731)
Pleuronectoidei	ANCESTRAL SPECIES	26	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000018035	ENSGT00390000012029	ENSGT01100000263891	ENSGT00940000167432	ENSGT00530000063410.a.q.b	ENSGT00940000153464.B.z.a
Tongue sole	MODERN SPECIES	19	ENSCSEG00000010963	PTGDR2 (ENSCSEG00000010959)	cabp2a (ENSCSEG00000010944)	ENSCSEG00000010935	ENSCSEG00000010923	ENSCSEG00000010914	vegfc (ENSCSEG00000010904)	TENM3 (ENSCSEG00000010849)	ENSCSEG00000010831	dctd (ENSCSEG00000010821)	CCSAP (ENSCSEG00000010817) #12	ACTA1 (ENSCSEG00000010802) #13	ENSCSEG00000010795	nup133 (ENSCSEG00000010705) #14	taf5l (ENSCSEG00000010683) #16	capn9 (ENSCSEG00000010637) #22	ENSCSEG00000010630	ltv1 (ENSCSEG00000010617)	ifngr1 (ENSCSEG00000010604)	ENSCSEG00000010124	ENSCSEG00000010083	vps54 (ENSCSEG00000010003)	commd1 (ENSCSEG00000009966)	MDH1 (ENSCSEG00000009948)	ugp2a (ENSCSEG00000009922)	cdc6 (ENSCSEG00000009911)	ENSCSEG00000009897	lef1 (ENSCSEG00000009871)	ENSCSEG00000009844	casp6a (ENSCSEG00000009858)	pla2g12a (ENSCSEG00000009836)
Turbot	MODERN SPECIES	20	sp2 (ENSSMAG00000021122)	socs7 (ENSSMAG00000021123)	ENSSMAG00000020853	mrpl45 (ENSSMAG00000020857)	ENSSMAG00000020855	ENSSMAG00000020858	ENSSMAG00000020859	ENSSMAG00000020863	ENSSMAG00000028011	ENSSMAG00000020865	ENSSMAG00000020868	CCSAP (ENSSMAG00000025914) #12	ENSSMAG00000020871 #13	nup133 (ENSSMAG00000020872) #14	taf5l (ENSSMAG00000020874) #16	capn9 (ENSSMAG00000020880) #22	ENSSMAG00000020890	ltv1 (ENSSMAG00000020883)	ENSSMAG00000020896	ENSSMAG00000021025	pus10 (ENSSMAG00000021017)	cct4 (ENSSMAG00000021011)	ENSSMAG00000031303	ENSSMAG00000021008	XPO1 (ENSSMAG00000021007)	ENSSMAG00000021005	ENSSMAG00000037283	commd1 (ENSSMAG00000021003)	ENSSMAG00000021002	otx2a (ENSSMAG00000020996)	MDH1 (ENSSMAG00000021087)
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00990000213804	ENSGT00390000012029
Tetraodontidae	ANCESTRAL SPECIES	16	ENSGT00390000014512	ENSGT00940000164531	ENSGT00940000159590.t	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00390000002789	ENSGT00940000177040	ENSGT00530000067736	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A.h	ENSGT00900000141021.b.b.f	ENSGT00940000166436	ENSGT00940000159327.u.b	ENSGT00530000063646.b	ENSGT01030000234638.b.a.a
Tetraodon	MODERN SPECIES	10	ENSTNIG00000006289	ENSTNIG00000000050	sp2 (ENSTNIG00000006290)	socs7 (ENSTNIG00000006291)	ENSTNIG00000006292	mrpl45 (ENSTNIG00000006293)	ENSTNIG00000000174	npepps (ENSTNIG00000006294)	ENSTNIG00000006295	WIPF2 (ENSTNIG00000006296)	cdc6 (ENSTNIG00000006297)	ENSTNIG00000006298	ACTA1 (ENSTNIG00000017237) #13	nup133 (ENSTNIG00000006300) #14	taf5l (ENSTNIG00000006301) #16	capn9 (ENSTNIG00000006302) #22	ltv1 (ENSTNIG00000006303)	ENSTNIG00000006304	ENSTNIG00000006305	c3b.2 (ENSTNIG00000006306)	yju2b (ENSTNIG00000006307)	ENSTNIG00000006308	PSPN (ENSTNIG00000000368)	wdr83 (ENSTNIG00000006309)	ENSTNIG00000006310	ENSTNIG00000000784	wdr83os (ENSTNIG00000006311)	cacna1ab (ENSTNIG00000011310)	ier2b (ENSTNIG00000011311)	NACC1 (ENSTNIG00000018807)	TRMT1 (ENSTNIG00000018808)
Fugu	MODERN SPECIES	8	ENSTRUG00000026571	mrpl45 (ENSTRUG00000007499)	ENSTRUG00000026041	ENSTRUG00000006896	ENSTRUG00000026298	ENSTRUG00000028743	npepps (ENSTRUG00000006339)	zgc:77929 (ENSTRUG00000006304)	ENSTRUG00000006299	WIPF2 (ENSTRUG00000006189)	cdc6 (ENSTRUG00000030863)	ENSTRUG00000029557 #12	ENSTRUG00000030016	nup133 (ENSTRUG00000004787) #14	taf5l (ENSTRUG00000028964) #16	capn9 (ENSTRUG00000002630) #22	ltv1 (ENSTRUG00000001989)	ENSTRUG00000021637	ifngr1 (ENSTRUG00000027690)	ENSTRUG00000027656	ENSTRUG00000028278	c3b.2 (ENSTRUG00000003028)	ENSTRUG00000026918	ENSTRUG00000020941	ENSTRUG00000024796	yju2b (ENSTRUG00000027799)	gtf3aa (ENSTRUG00000007067)	ENSTRUG00000007142	wdr83 (ENSTRUG00000007148)	wdr83os (ENSTRUG00000031419)	cacna1ab (ENSTRUG00000007330)
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00990000213804	ENSGT00390000012029
Ballan wrasse	MODERN SPECIES	133	ENSLBEG00000000990	ENSLBEG00000001027	sp2 (ENSLBEG00000001053)	socs7 (ENSLBEG00000001103)	ENSLBEG00000001130	mrpl45 (ENSLBEG00000001166)	npepps (ENSLBEG00000001199)	zgc:77929 (ENSLBEG00000001283)	MRPL21 (ENSLBEG00000001294)	WIPF2 (ENSLBEG00000001322)	cdc6 (ENSLBEG00000001364)	CCSAP (ENSLBEG00000001450) #12	ACTA1 (ENSLBEG00000001468) #13	nup133 (ENSLBEG00000001504) #14	taf5l (ENSLBEG00000001626) #16	capn9 (ENSLBEG00000001646) #22	ltv1 (ENSLBEG00000001681)	ENSLBEG00000001698	ifngr1 (ENSLBEG00000001735)	ENSLBEG00000001772	ENSLBEG00000001791	pus10 (ENSLBEG00000001879)	cct4 (ENSLBEG00000001977)	FAM161A (ENSLBEG00000002029)	ENSLBEG00000002069	XPO1 (ENSLBEG00000002104)	USP34 (ENSLBEG00000002206)	commd1 (ENSLBEG00000002438)	b3gnt2a (ENSLBEG00000002450)	ENSLBEG00000002466	otx2a (ENSLBEG00000002499)
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00990000213804	ENSGT00390000012029
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT01050000244843.c.a.a.b.a	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT01100000263977	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00990000213804	ENSGT00390000012029	ENSGT00940000155345.r
Gilthead seabream	MODERN SPECIES		ENSSAUG00010002174	mrpl45 (ENSSAUG00010002162)	npepps (ENSSAUG00010002068)	zgc:77929 (ENSSAUG00010002051)	mrpl21 (ENSSAUG00010002046)	WIPF2 (ENSSAUG00010002042)	ENSSAUG00010002039	ENSSAUG00010002032	ENSSAUG00010002027	cdc6 (ENSSAUG00010002017)	ENSSAUG00010002013	CCSAP (ENSSAUG00010002011) #12	ACTA1 (ENSSAUG00010001996) #13	nup133 (ENSSAUG00010001100) #14	taf5l (ENSSAUG00010001073) #16	capn9 (ENSSAUG00010001056) #22	ENSSAUG00010001044	ENSSAUG00010001038	ltv1 (ENSSAUG00010001031)	ENSSAUG00010001025	ENSSAUG00010001023	ENSSAUG00010001022	ENSSAUG00010000467	pus10 (ENSSAUG00010000287)	cct4 (ENSSAUG00010000203)	ENSSAUG00010000167	ENSSAUG00010000162	XPO1 (ENSSAUG00010000126)	USP34 (ENSSAUG00010000076)	ENSSAUG00010000061	ENSSAUG00010000059
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT01050000244843.c.a.a.b.a	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT01100000264953	ENSGT00390000002789	ENSGT00530000067736	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT00940000167432	ENSGT00530000063410.a.q.b
Large yellow croaker	MODERN SPECIES	481	baiap2l2b (ENSLCRG00005007488)	ENSLCRG00005007130	dnal4b (ENSLCRG00005007126)	nptxrb (ENSLCRG00005007125)	cbx6a (ENSLCRG00005007124)	pla2g6 (ENSLCRG00005007106)	ENSLCRG00005007088	PDGFA (ENSLCRG00005007085)	dnaja3b (ENSLCRG00005007081)	ENSLCRG00005007079	cdc6 (ENSLCRG00005007076)	CCSAP (ENSLCRG00005007075) #12	ACTA1 (ENSLCRG00005007073) #13	nup133 (ENSLCRG00005005595) #14	taf5l (ENSLCRG00005005571) #16	capn9 (ENSLCRG00005005500) #22	ENSLCRG00005005492	ltv1 (ENSLCRG00005005488)	ENSLCRG00005005486	ENSLCRG00005005485	ENSLCRG00005000905	pus10 (ENSLCRG00005000594)	cct4 (ENSLCRG00005000430)	ENSLCRG00005000400	ENSLCRG00005000395	XPO1 (ENSLCRG00005000379)	USP34 (ENSLCRG00005000282)	commd1 (ENSLCRG00005000214)	b3gnt2a (ENSLCRG00005000207)	ENSLCRG00005018810	otx2a (ENSLCRG00005018806)
European seabass	MODERN SPECIES	20	ENSDLAG00005020090	sp2 (ENSDLAG00005020071)	socs7 (ENSDLAG00005020035)	ENSDLAG00005031581	ENSDLAG00005019562	ENSDLAG00005019545	ENSDLAG00005032328	ENSDLAG00005030087	ENSDLAG00005019531	ENSDLAG00005027908	ENSDLAG00005032061	ENSDLAG00005031947	ENSDLAG00005019514 #12	nup133 (ENSDLAG00005019343) #14	taf5l (ENSDLAG00005019329) #16	capn9 (ENSDLAG00005018075) #22	ENSDLAG00005018035	ENSDLAG00005017913	ENSDLAG00005017905	ltv1 (ENSDLAG00005017941)	ENSDLAG00005026547	cct4 (ENSDLAG00005015352)	pus10 (ENSDLAG00005027536)	ENSDLAG00005015337	ENSDLAG00005015336	ENSDLAG00005034477	ENSDLAG00005029700	ENSDLAG00005014294	ENSDLAG00005033976	ENSDLAG00005014185	ENSDLAG00005032350
Perciformes	ANCESTRAL SPECIES	2	ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT00940000167432
Cottioidei	ANCESTRAL SPECIES	3											ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT00940000177040	ENSGT00390000002789	ENSGT00530000067736	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263891	ENSGT00940000167432
Lumpfish	MODERN SPECIES		ENSCLMG00005002231	socs7 (ENSCLMG00005002228)	sp2 (ENSCLMG00005002226)	ENSCLMG00005001971	mrpl4 (ENSCLMG00005001955)	ENSCLMG00005001953	ptp4a1 (ENSCLMG00005001947)	ENSCLMG00005001943	ENSCLMG00005001941	cdc6 (ENSCLMG00005017508)	CCSAP (ENSCLMG00005017507) #12	ACTA1 (ENSCLMG00005017495) #13	nup133 (ENSCLMG00005015713) #14	taf5l (ENSCLMG00005015705) #16	ENSCLMG00005015704	capn9 (ENSCLMG00005015408) #22	ENSCLMG00005015407	ltv1 (ENSCLMG00005015406)	ENSCLMG00005015405	ENSCLMG00005015403	ENSCLMG00005015395	pus10 (ENSCLMG00005015393)	cct4 (ENSCLMG00005015151)	ENSCLMG00005015143	FAM161A (ENSCLMG00005015052)	XPO1 (ENSCLMG00005014924)	USP34 (ENSCLMG00005013361)	commd1 (ENSCLMG00005013349)	b3gnt2a (ENSCLMG00005013348)	ENSCLMG00005013347	otx2a (ENSCLMG00005013346)
Stickleback	MODERN SPECIES	4	ENSGACG00000019807	col9a1a (ENSGACG00000019798)	ptp4a1 (ENSGACG00000019788)	lgsn (ENSGACG00000019786)	myom2a (ENSGACG00000019784)	hk1 (ENSGACG00000019782)	zgc:77929 (ENSGACG00000019781)	ENSGACG00000019780	WIPF2 (ENSGACG00000019779)	ENSGACG00000019778	ENSGACG00000019775	ENSGACG00000019774	ENSGACG00000019773	nup133 (ENSGACG00000019771) #14	taf5l (ENSGACG00000019769) #16	capn9 (ENSGACG00000019761) #22	ltv1 (ENSGACG00000019756)	ENSGACG00000019754	ENSGACG00000019752	pus10 (ENSGACG00000019749)	cct4 (ENSGACG00000019739)	ENSGACG00000019738	ENSGACG00000019737	XPO1 (ENSGACG00000019736)	USP34 (ENSGACG00000019735)	ENSGACG00000019734 #10	otx2a (ENSGACG00000019733)	tp53bp2b (ENSGACG00000019730)	gtpbp2b (ENSGACG00000019729)	ENSGACG00000019728	ENSGACG00000019727
Perciformes_a	ANCESTRAL SPECIES		ENSGT00940000164531	ENSGT00940000159590	ENSGT00940000156314.b	ENSGT00940000160776	ENSGT00390000012679	ENSGT00940000155246	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155557.jc.b	ENSGT00400000025126	ENSGT00530000063498.A	ENSGT00390000003512.r #12	ENSGT00940000156048.e.a.a.a.a #13	ENSGT00390000011529 #14	ENSGT00940000153342.b #16	ENSGT00940000158966 #22	ENSGT01100000264953	ENSGT00390000002789	ENSGT00530000067736	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000012029	ENSGT00940000155345.r	ENSGT01100000263601	ENSGT00940000167432	ENSGT00530000063410.a.q.b
Pike perch	MODERN SPECIES	178															taf5l (ENSSLUG00000013839) #16	capn9 (ENSSLUG00000013792) #22	ENSSLUG00000013777	ltv1 (ENSSLUG00000013771)	ENSSLUG00000013763	ENSSLUG00000013754	ENSSLUG00000013745	ENSSLUG00000013449	pus10 (ENSSLUG00000013288)	cct4 (ENSSLUG00000013217)	ENSSLUG00000013207	XPO1 (ENSSLUG00000009410)	USP34 (ENSSLUG00000009154)	ENSSLUG00000009084	ENSSLUG00000009079	commd1 (ENSSLUG00000009074)	b3gnt2a (ENSSLUG00000009066)
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	275	WIPF2 (ENSCGOG00000018179)	ENSCGOG00000018178	ENSCGOG00000018177	ENSCGOG00000017859	cdc6 (ENSCGOG00000017834)	ENSCGOG00000017832 #12	nup133 (ENSCGOG00000017427) #14	taf5l (ENSCGOG00000017391) #16	ENSCGOG00000017386 #22	cdc6 (ENSCGOG00000017380)	ENSCGOG00000017379 #12	ACTA1 (ENSCGOG00000014722) #13	nup133 (ENSCGOG00000013794) #14	ENSCGOG00000013770	taf5l (ENSCGOG00000013768) #16	capn9 (ENSCGOG00000013764) #22	ENSCGOG00000013762 #22
Channel bull blenny	MODERN SPECIES	275	socs7 (ENSCGOG00000018539)	ENSCGOG00000018535	ENSCGOG00000018533	mrpl45 (ENSCGOG00000018530)	npepps (ENSCGOG00000018195)	zgc:77929 (ENSCGOG00000018183)	mrpl21 (ENSCGOG00000018180)	WIPF2 (ENSCGOG00000018179)	ENSCGOG00000018178	ENSCGOG00000018177	ENSCGOG00000017859	cdc6 (ENSCGOG00000017834)	ENSCGOG00000017832 #12	nup133 (ENSCGOG00000017427) #14	taf5l (ENSCGOG00000017391) #16	ENSCGOG00000017386 #22	cdc6 (ENSCGOG00000017380)	ENSCGOG00000017379 #12	ACTA1 (ENSCGOG00000014722) #13	nup133 (ENSCGOG00000013794) #14	ENSCGOG00000013770	taf5l (ENSCGOG00000013768) #16	capn9 (ENSCGOG00000013764) #22	ENSCGOG00000013762 #22
Channel bull blenny	MODERN SPECIES	275	ENSCGOG00000018178	ENSCGOG00000018177	ENSCGOG00000017859	cdc6 (ENSCGOG00000017834)	ENSCGOG00000017832 #12	nup133 (ENSCGOG00000017427) #14	taf5l (ENSCGOG00000017391) #16	ENSCGOG00000017386 #22	cdc6 (ENSCGOG00000017380)	ENSCGOG00000017379 #12	ACTA1 (ENSCGOG00000014722) #13	nup133 (ENSCGOG00000013794) #14	ENSCGOG00000013770	taf5l (ENSCGOG00000013768) #16	capn9 (ENSCGOG00000013764) #22	ENSCGOG00000013762 #22
Elephant shark	MODERN SPECIES	1519	UTRN (ENSCMIG00000007999)	stx11b.2 (ENSCMIG00000008079)	ccsapb (ENSCMIG00000008085) #12	ENSCMIG00000008087	PDCD2 (ENSCMIG00000008090)	nup133 (ENSCMIG00000008151) #14	ABCB10 (ENSCMIG00000008350) #15	ENSCMIG00000008368 #16	ENSCMIG00000008369 #16	taf5l (ENSCMIG00000008371) #16	ENSCMIG00000008372	urb2 (ENSCMIG00000008374) #17	memo1 (ENSCMIG00000008377)	bud23 (ENSCMIG00000008381)	ENSCMIG00000008386	capn9 (ENSCMIG00000008408) #22	ENSCMIG00000008424	katna1 (ENSCMIG00000008428)	ppil4 (ENSCMIG00000008445)	lats1 (ENSCMIG00000008448)	nup43 (ENSCMIG00000008451)	SHPRH (ENSCMIG00000008460)	fbxo30a (ENSCMIG00000008479)	tab2 (ENSCMIG00000008480)	usta (ENSCMIG00000008481)	sash1a (ENSCMIG00000008489)	stxbp5a (ENSCMIG00000008601)	ENSCMIG00000008995	ENSCMIG00000008999	rab32a (ENSCMIG00000009005)	GRM1 (ENSCMIG00000009023)