Glires	ANCESTRAL SPECIES	17	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00390000005119	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT01100000266557	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00390000005119	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT01100000266557	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Mus	ANCESTRAL SPECIES	1	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Ryukyu mouse	MODERN SPECIES	11	Cenpb (MGP_CAROLIEiJ_G0024323) #7	Spef1 (MGP_CAROLIEiJ_G0024322) #8	1700037H04Rik (MGP_CAROLIEiJ_G0024321) #9	MGP_CAROLIEiJ_G0024320 #10	Hspa12b (MGP_CAROLIEiJ_G0024319) #11	Siglec1 (MGP_CAROLIEiJ_G0024318) #12	Adam33 (MGP_CAROLIEiJ_G0024317) #13	Gfra4 (MGP_CAROLIEiJ_G0024316) #14	Atrn (MGP_CAROLIEiJ_G0024315) #15	Dnaaf9 (MGP_CAROLIEiJ_G0024314) #16	Slc4a11 (MGP_CAROLIEiJ_G0024313) #17	Itpa (MGP_CAROLIEiJ_G0024312) #18	Ddrgk1 (MGP_CAROLIEiJ_G0024311) #19	Lzts3 (MGP_CAROLIEiJ_G0024310) #20	Fastkd5 (MGP_CAROLIEiJ_G0024309) #21	Ubox5 (MGP_CAROLIEiJ_G0024308) #22	Avp (MGP_CAROLIEiJ_G0024307) #23	Oxt (MGP_CAROLIEiJ_G0024306) #24	Mrps26 (MGP_CAROLIEiJ_G0024305) #25	Ptpra (MGP_CAROLIEiJ_G0024304) #26	Vps16 (MGP_CAROLIEiJ_G0024303) #27	Pced1a (MGP_CAROLIEiJ_G0024302) #28	Tmem239 (MGP_CAROLIEiJ_G0024301) #29	1700020A23Rik (MGP_CAROLIEiJ_G0024300) #30	MGP_CAROLIEiJ_G0024299 #31	Cpxm1 (MGP_CAROLIEiJ_G0024298) #32	Ebf4 (MGP_CAROLIEiJ_G0024297) #33	Idh3b (MGP_CAROLIEiJ_G0024296) #34	Nop56 (MGP_CAROLIEiJ_G0024295) #35	Tmc2 (MGP_CAROLIEiJ_G0024294) #36	Snrpb (MGP_CAROLIEiJ_G0024293) #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Mouse	MODERN SPECIES	11	Cdc25b (ENSMUSG00000027330)	Cenpb (ENSMUSG00000068267) #7	Spef1 (ENSMUSG00000027329) #8	1700037H04Rik (ENSMUSG00000027327) #9	Hspa12b (ENSMUSG00000074793) #11	Siglec1 (ENSMUSG00000027322) #12	Adam33 (ENSMUSG00000027318) #13	Gfra4 (ENSMUSG00000027316) #14	Atrn (ENSMUSG00000027312) #15	Dnaaf9 (ENSMUSG00000027309) #16	Slc4a11 (ENSMUSG00000074796) #17	Itpa (ENSMUSG00000074797) #18	Ddrgk1 (ENSMUSG00000068290) #19	Lzts3 (ENSMUSG00000037703) #20	Fastkd5 (ENSMUSG00000079043) #21	Ubox5 (ENSMUSG00000027300) #22	Avp (ENSMUSG00000037727) #23	Oxt (ENSMUSG00000027301) #24	Mrps26 (ENSMUSG00000037740) #25	Ptpra (ENSMUSG00000027303) #26	Vps16 (ENSMUSG00000027411) #27	Pced1a (ENSMUSG00000037773) #28	Tmem239 (ENSMUSG00000049692) #29	1700020A23Rik (ENSMUSG00000027409) #30	Cpxm1 (ENSMUSG00000027408) #32	Ebf4 (ENSMUSG00000053552) #33	Idh3b (ENSMUSG00000027406) #34	Nop56 (ENSMUSG00000027405) #35	Tmc2 (ENSMUSG00000060332) #36	Snrpb (ENSMUSG00000027404) #37	Tgm6 (ENSMUSG00000027403)
Mus_C	ANCESTRAL SPECIES		ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
spretus	MODERN SPECIES	11	Cdc25b (MGP_SPRETEiJ_G0025244)	Cenpb (MGP_SPRETEiJ_G0025243) #7	Spef1 (MGP_SPRETEiJ_G0025242) #8	1700037H04Rik (MGP_SPRETEiJ_G0025241) #9	MGP_SPRETEiJ_G0025240	Hspa12b (MGP_SPRETEiJ_G0025239) #11	Siglec1 (MGP_SPRETEiJ_G0025238) #12	Adam33 (MGP_SPRETEiJ_G0025237) #13	Gfra4 (MGP_SPRETEiJ_G0025236) #14	Atrn (MGP_SPRETEiJ_G0025235) #15	Slc4a11 (MGP_SPRETEiJ_G0025233) #17	Itpa (MGP_SPRETEiJ_G0025232) #18	Ddrgk1 (MGP_SPRETEiJ_G0025231) #19	Lzts3 (MGP_SPRETEiJ_G0025230) #20	Fastkd5 (MGP_SPRETEiJ_G0025229) #21	Ubox5 (MGP_SPRETEiJ_G0025228) #22	Avp (MGP_SPRETEiJ_G0025227) #23	Oxt (MGP_SPRETEiJ_G0025226) #24	Mrps26 (MGP_SPRETEiJ_G0025225) #25	Ptpra (MGP_SPRETEiJ_G0025224) #26	Vps16 (MGP_SPRETEiJ_G0025223) #27	Pced1a (MGP_SPRETEiJ_G0025222) #28	Tmem239 (MGP_SPRETEiJ_G0025221) #29	1700020A23Rik (MGP_SPRETEiJ_G0025220) #30	MGP_SPRETEiJ_G0025219 #31	Cpxm1 (MGP_SPRETEiJ_G0025218) #32	Ebf4 (MGP_SPRETEiJ_G0025217) #33	Idh3b (MGP_SPRETEiJ_G0025216) #34	Nop56 (MGP_SPRETEiJ_G0025215) #35	Tmc2 (MGP_SPRETEiJ_G0025214) #36	Snrpb (MGP_SPRETEiJ_G0025213) #37
Steppe mouse	MODERN SPECIES	3100	1700037H04Rik (ENSMSIG00000014310) #9	Hspa12b (ENSMSIG00000014280) #11	Siglec1 (ENSMSIG00000014173) #12	Adam33 (ENSMSIG00000014090) #13	Gfra4 (ENSMSIG00000014050) #14	Atrn (ENSMSIG00000014020) #15	ENSMSIG00000014004	ENSMSIG00000013992	ENSMSIG00000013972	Dnaaf9 (ENSMSIG00000013648) #16	Slc4a11 (ENSMSIG00000013565) #17	ENSMSIG00000013514 #18	Ddrgk1 (ENSMSIG00000013480) #19	Lzts3 (ENSMSIG00000013473) #20	ENSMSIG00000013450	Ubox5 (ENSMSIG00000013436) #22	Avp (ENSMSIG00000013423) #23	Oxt (ENSMSIG00000013416) #24	Mrps26 (ENSMSIG00000013383) #25	ENSMSIG00000013369	Ptpra (ENSMSIG00000013175) #26	Vps16 (ENSMSIG00000013066) #27	Tmem239 (ENSMSIG00000013056) #29	1700020A23Rik (ENSMSIG00000013042) #30	Cpxm1 (ENSMSIG00000012969) #32	Ebf4 (ENSMSIG00000012856) #33	ENSMSIG00000012850	Idh3b (ENSMSIG00000012771) #34	Nop56 (ENSMSIG00000012714) #35	Tmc2 (ENSMSIG00000012652) #36	Snrpb (ENSMSIG00000012633) #37
Rat	MODERN SPECIES	13	Cenpb (ENSRNOG00000057284) #7	RGD1311739 (ENSRNOG00000021245) #9	Hspa12b (ENSRNOG00000021244) #11	Siglec1 (ENSRNOG00000021243) #12	Adam33 (ENSRNOG00000021242) #13	Gfra4 (ENSRNOG00000021241) #14	Atrn (ENSRNOG00000021240) #15	ENSRNOG00000069383	ENSRNOG00000069867	Dnaaf9 (ENSRNOG00000021237) #16	Slc4a11 (ENSRNOG00000021234) #17	Itpa (ENSRNOG00000021233) #18	Ddrgk1 (ENSRNOG00000021232) #19	Lzts3 (ENSRNOG00000021231) #20	Fastkd5 (ENSRNOG00000053270) #21	Ubox5 (ENSRNOG00000021230) #22	Avp (ENSRNOG00000021229) #23	Oxt (ENSRNOG00000021225) #24	Mrps26 (ENSRNOG00000021224) #25	Ptpra (ENSRNOG00000021223) #26	Vps16 (ENSRNOG00000021222) #27	Pced1a (ENSRNOG00000021221) #28	Tmem239 (ENSRNOG00000047004) #29	Cpxm1 (ENSRNOG00000021220) #32	Ebf4 (ENSRNOG00000007408) #33	Rps12l3 (ENSRNOG00000033913)	AABR07053734.1 (ENSRNOG00000031034)	Idh3b (ENSRNOG00000007316) #34	Nop56 (ENSRNOG00000007128) #35	Tmc2 (ENSRNOG00000007017) #36	Snrpb (ENSRNOG00000006961) #37
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.b ##23	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.b.b ##37
Chinese hamster chok1gshd	MODERN SPECIES	188	Cenpb (ENSCGRG00001019077) #7	Spef1 (ENSCGRG00001021469) #8	1700037H04Rik (ENSCGRG00001010201) #9	Hspa12b (ENSCGRG00001009631) #11	Siglec1 (ENSCGRG00001022404) #12	Adam33 (ENSCGRG00001019850) #13	Gfra4 (ENSCGRG00001024505) #14	Atrn (ENSCGRG00001022711) #15	ENSCGRG00001014567	Dnaaf9 (ENSCGRG00001017760) #16	Slc4a11 (ENSCGRG00001005371) #17	ITPA (ENSCGRG00001009380) #18	Ddrgk1 (ENSCGRG00001010910) #19	Lzts3 (ENSCGRG00001007812) #20	Fastkd5 (ENSCGRG00001021453) #21	Ubox5 (ENSCGRG00001022453) #22	Avp (ENSCGRG00001009090) #23	ENSCGRG00001008948 ##23	ENSCGRG00001009214	Mrps26 (ENSCGRG00001018911) #25	Ptpra (ENSCGRG00001014995) #26	Vps16 (ENSCGRG00001017458) #27	Pced1a (ENSCGRG00001019937) #28	Tmem239 (ENSCGRG00001001392) #29	1700020A23Rik (ENSCGRG00001021320) #30	Cpxm1 (ENSCGRG00001014283) #32	Ebf4 (ENSCGRG00001017309) #33	Idh3b (ENSCGRG00001012059) #34	Nop56 (ENSCGRG00001019528) #35	Tmc2 (ENSCGRG00001012157) #36	ENSCGRG00001019697
Golden Hamster	MODERN SPECIES	631	Spef1 (ENSMAUG00000020367) #8	ENSMAUG00000006345 #9	Hspa12b (ENSMAUG00000015233) #11	Siglec1 (ENSMAUG00000002470) #12	Adam33 (ENSMAUG00000018073) #13	Gfra4 (ENSMAUG00000021968) #14	Atrn (ENSMAUG00000012223) #15	ENSMAUG00000008969	ENSMAUG00000008516	ENSMAUG00000014651	Slc4a11 (ENSMAUG00000021645) #17	Itpa (ENSMAUG00000021384) #18	Ddrgk1 (ENSMAUG00000022014) #19	Lzts3 (ENSMAUG00000021395) #20	Fastkd5 (ENSMAUG00000020637) #21	Ubox5 (ENSMAUG00000019757) #22	ENSMAUG00000021401 #23	Mrps26 (ENSMAUG00000019571) #25	Ptpra (ENSMAUG00000022109) #26	Vps16 (ENSMAUG00000010001) #27	ENSMAUG00000021075 #28	ENSMAUG00000022047 #31	Cpxm1 (ENSMAUG00000020338) #32	Ebf4 (ENSMAUG00000006779) #33	Idh3b (ENSMAUG00000020105) #34	Nop56 (ENSMAUG00000021793) #35	Tmc2 (ENSMAUG00000006671) #36	ENSMAUG00000020656 ##37	ENSMAUG00000007538	Tgm6 (ENSMAUG00000021585)	Tgm3 (ENSMAUG00000018002)
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37	ENSGT01050000244866.A.a.a.a.a
Northern American deer mouse	MODERN SPECIES	17	Cenpb (ENSPEMG00000005445) #7	Spef1 (ENSPEMG00000002306) #8	1700037H04Rik (ENSPEMG00000018470) #9	Hspa12b (ENSPEMG00000019282) #11	ENSPEMG00000018674	Siglec1 (ENSPEMG00000002568) #12	Adam33 (ENSPEMG00000016937) #13	ENSPEMG00000012584	Atrn (ENSPEMG00000006119) #15	Dnaaf9 (ENSPEMG00000011552) #16	Slc4a11 (ENSPEMG00000017984) #17	ENSPEMG00000014788 #18	Ddrgk1 (ENSPEMG00000009063) #19	Lzts3 (ENSPEMG00000013505) #20	Fastkd5 (ENSPEMG00000017742) #21	Ubox5 (ENSPEMG00000018299) #22	Avp (ENSPEMG00000003752) #23	Oxt (ENSPEMG00000009490) #24	Mrps26 (ENSPEMG00000010334) #25	Ptpra (ENSPEMG00000001508) #26	ENSPEMG00000026020	Vps16 (ENSPEMG00000013167) #27	Pced1a (ENSPEMG00000014207) #28	Tmem239 (ENSPEMG00000010668) #29	1700020A23Rik (ENSPEMG00000025056) #30	Cpxm1 (ENSPEMG00000001942) #32	Ebf4 (ENSPEMG00000007345) #33	Idh3b (ENSPEMG00000016045) #34	ENSPEMG00000030460	Tmc2 (ENSPEMG00000014826) #36	Snrpb (ENSPEMG00000007948) #37
Prairie vole	MODERN SPECIES	86	Spef1 (ENSMOCG00000016870) #8	1700037H04Rik (ENSMOCG00000002686) #9	Hspa12b (ENSMOCG00000020638) #11	Siglec1 (ENSMOCG00000013504) #12	Adam33 (ENSMOCG00000022885) #13	Gfra4 (ENSMOCG00000020802) #14	Atrn (ENSMOCG00000000501) #15	ENSMOCG00000001889	ENSMOCG00000015477	Dnaaf9 (ENSMOCG00000018106) #16	Slc4a11 (ENSMOCG00000016721) #17	ENSMOCG00000011173 #18	Ddrgk1 (ENSMOCG00000017173) #19	Lzts3 (ENSMOCG00000019922) #20	Fastkd5 (ENSMOCG00000018299) #21	Ubox5 (ENSMOCG00000021078) #22	Avp (ENSMOCG00000014821) #23	Oxt (ENSMOCG00000017703) #24	MRPS26 (ENSMOCG00000016053) #25	Ptpra (ENSMOCG00000013827) #26	Vps16 (ENSMOCG00000010998) #27	ENSMOCG00000011698 #28	Tmem239 (ENSMOCG00000000098) #29	1700020A23Rik (ENSMOCG00000002438) #30	Cpxm1 (ENSMOCG00000005470) #32	Ebf4 (ENSMOCG00000011784) #33	Idh3b (ENSMOCG00000009379) #34	ENSMOCG00000018981 #35	ENSMOCG00000004225 #35	Tmc2 (ENSMOCG00000015150) #36	ENSMOCG00000002892 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1686										ENSNGAG00000015989	Dnaaf9 (ENSNGAG00000005585) #16	Slc4a11 (ENSNGAG00000018270) #17	Itpa (ENSNGAG00000016121) #18	Ddrgk1 (ENSNGAG00000000119) #19	Lzts3 (ENSNGAG00000018130) #20	Ubox5 (ENSNGAG00000020965) #22	Avp (ENSNGAG00000007700) #23	Oxt (ENSNGAG00000010896) #24	Mrps26 (ENSNGAG00000013778) #25	Ptpra (ENSNGAG00000015467) #26	Vps16 (ENSNGAG00000019525) #27	Pced1a (ENSNGAG00000001267) #28	Tmem239 (ENSNGAG00000014119) #29	Cpxm1 (ENSNGAG00000020071) #32	Ebf4 (ENSNGAG00000010179) #33	Idh3b (ENSNGAG00000016651) #34	ENSNGAG00000019819 #35	ENSNGAG00000020493 #35	Tmc2 (ENSNGAG00000020836) #36	ENSNGAG00000014327	ENSNGAG00000015321
Lesser Egyptian jerboa	MODERN SPECIES	84	Ap5s1 (ENSJJAG00000011042)	ENSJJAG00000014354	Cenpb (ENSJJAG00000002178) #7	Spef1 (ENSJJAG00000020535) #8	ENSJJAG00000014233 #9	Hspa12b (ENSJJAG00000006200) #11	Siglec1 (ENSJJAG00000004155) #12	Adam33 (ENSJJAG00000018028) #13	Gfra4 (ENSJJAG00000023836) #14	Atrn (ENSJJAG00000013554) #15	Dnaaf9 (ENSJJAG00000010931) #16	Slc4a11 (ENSJJAG00000023904) #17	Itpa (ENSJJAG00000019256) #18	Fastkd5 (ENSJJAG00000018838) #21	ENSJJAG00000016818	Ubox5 (ENSJJAG00000005580) #22	Avp (ENSJJAG00000024270) #23	Oxt (ENSJJAG00000023461) #24	Mrps26 (ENSJJAG00000021092) #25	Ptpra (ENSJJAG00000015717) #26	Tmem239 (ENSJJAG00000020111) #29	Cpxm1 (ENSJJAG00000003720) #32	Ebf4 (ENSJJAG00000022459) #33	Tmc2 (ENSJJAG00000009946) #36	Snrpb (ENSJJAG00000024170) #37	Tgm6 (ENSJJAG00000012854)	Tgm3 (ENSJJAG00000018372)	ENSJJAG00000004224
Kangaroo rat	MODERN SPECIES	332	Cdc25b (ENSDORG00000003852)	Cenpb (ENSDORG00000003851) #7	Spef1 (ENSDORG00000003850) #8	1700037H04Rik (ENSDORG00000026291) #9	Hspa12b (ENSDORG00000003847) #11	Siglec1 (ENSDORG00000005848) #12	Adam33 (ENSDORG00000005845) #13	ENSDORG00000005842 #14	Atrn (ENSDORG00000005836) #15	ENSDORG00000027146	Dnaaf9 (ENSDORG00000005703) #16	Slc4a11 (ENSDORG00000016220) #17	Itpa (ENSDORG00000016219) #18	Ddrgk1 (ENSDORG00000025128) #19	Lzts3 (ENSDORG00000023886) #20	Ubox5 (ENSDORG00000023223) #22	Fastkd5 (ENSDORG00000029181) #21	Avp (ENSDORG00000026916) #23	Oxt (ENSDORG00000024438) #24	Mrps26 (ENSDORG00000012900) #25	Ptpra (ENSDORG00000012895) #26	Vps16 (ENSDORG00000023158) #27	Pced1a (ENSDORG00000027465) #28	Tmem239 (ENSDORG00000001749) #29	1700020A23Rik (ENSDORG00000027106) #30	Cpxm1 (ENSDORG00000003235) #32	Ebf4 (ENSDORG00000004139) #33	Idh3b (ENSDORG00000013913) #34	ENSDORG00000024850 #35	ENSDORG00000013918 #35	Tmc2 (ENSDORG00000013570) #36
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT01100000266557	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00390000005119	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000157346.b #15	ENSGT00940000160491 #14	ENSGT00940000157346.a #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a.b #24	ENSGT00390000004511.d.a.a.a.a.a #24	ENSGT00390000008453 #25	ENSGT00390000005119	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36
Marmotini	ANCESTRAL SPECIES	5	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000157346.b #15	ENSGT00940000160491 #14	ENSGT00940000157346.a #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a.a.a.a.b #24	ENSGT00390000004511.d.a.a.b #24	ENSGT00390000004511.d.a.a.a.a.a.a #24	ENSGT00390000008453 #25	ENSGT00390000005119	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35
Marmotini_b	ANCESTRAL SPECIES	18	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000157346.b #15	ENSGT00940000160491 #14	ENSGT00940000157346.a #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a.a.a.a.b #24	ENSGT00390000004511.d.a.a.b #24	ENSGT00390000004511.d.a.a.a.a.a.a #24	ENSGT00390000008453 #25	ENSGT00390000005119	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35
Arctic ground squirrel	MODERN SPECIES	435								GFRA4 (ENSUPAG00010023441) #14	ATRN (ENSUPAG00010023403) #15	DNAAF9 (ENSUPAG00010023402) #16	SLC4A11 (ENSUPAG00010023401) #17	ITPA (ENSUPAG00010023400) #18	DDRGK1 (ENSUPAG00010023399) #19	LZTS3 (ENSUPAG00010023398) #20	FASTKD5 (ENSUPAG00010023397) #21	UBOX5 (ENSUPAG00010023396) #22	AVP (ENSUPAG00010023395) #23	ENSUPAG00010023394 #24	ENSUPAG00010023393	ENSUPAG00010023392 #24	ENSUPAG00010023391 #24	MRPS26 (ENSUPAG00010023390) #25	GNRH2 (ENSUPAG00010023389)	PTPRA (ENSUPAG00010023388) #26	VPS16 (ENSUPAG00010023387) #27	PCED1A (ENSUPAG00010023386) #28	TMEM239 (ENSUPAG00010023385) #29	C20orf141 (ENSUPAG00010023384) #31	CPXM1 (ENSUPAG00010023383) #32	EBF4 (ENSUPAG00010023382) #33	IDH3B (ENSUPAG00010023381) #34
Squirrel	MODERN SPECIES	85	ENSSTOG00000024587	CENPB (ENSSTOG00000024375) #7	SPEF1 (ENSSTOG00000006040) #8	ADISSP (ENSSTOG00000006026) #9	HSPA12B (ENSSTOG00000006000) #11	SIGLEC1 (ENSSTOG00000007494) #12	ADAM33 (ENSSTOG00000012414) #13	ENSSTOG00000024663 #15	GFRA4 (ENSSTOG00000032183) #14	ENSSTOG00000000760 #15	DNAAF9 (ENSSTOG00000006511) #16	SLC4A11 (ENSSTOG00000006469) #17	ITPA (ENSSTOG00000021471) #18	DDRGK1 (ENSSTOG00000006435) #19	LZTS3 (ENSSTOG00000006427) #20	UBOX5 (ENSSTOG00000019785) #22	AVP (ENSSTOG00000023202) #23	ENSSTOG00000023996 #24	ENSSTOG00000026916	ENSSTOG00000015044 #24	ENSSTOG00000030242	MRPS26 (ENSSTOG00000026786) #25	PTPRA (ENSSTOG00000023551) #26	VPS16 (ENSSTOG00000016357) #27	PCED1A (ENSSTOG00000016356) #28	TMEM239 (ENSSTOG00000024083) #29	ENSSTOG00000023115 #30	CPXM1 (ENSSTOG00000016354) #32	EBF4 (ENSSTOG00000016352) #33	IDH3B (ENSSTOG00000012515) #34	NOP56 (ENSSTOG00000012503) #35
Alpin marmot	MODERN SPECIES		CENPB (ENSMMMG00000023947) #7	SPEF1 (ENSMMMG00000023946) #8	ADISSP (ENSMMMG00000023945) #9	HSPA12B (ENSMMMG00000023943) #11	SIGLEC1 (ENSMMMG00000023929) #12	ADAM33 (ENSMMMG00000023924) #13	GFRA4 (ENSMMMG00000023923) #14	ATRN (ENSMMMG00000023922) #15	ENSMMMG00000023921	DNAAF9 (ENSMMMG00000023920) #16	SLC4A11 (ENSMMMG00000023919) #17	ITPA (ENSMMMG00000023918) #18	DDRGK1 (ENSMMMG00000023917) #19	LZTS3 (ENSMMMG00000023916) #20	FASTKD5 (ENSMMMG00000023915) #21	UBOX5 (ENSMMMG00000023914) #22	ENSMMMG00000023913 #24	AVP (ENSMMMG00000023912) #23	ENSMMMG00000023911 #24	ENSMMMG00000023908 #24	MRPS26 (ENSMMMG00000023906) #25	GNRH2 (ENSMMMG00000023905)	PTPRA (ENSMMMG00000023904) #26	ENSMMMG00000023903	VPS16 (ENSMMMG00000023902) #27	PCED1A (ENSMMMG00000023901) #28	TMEM239 (ENSMMMG00000023900) #29	C20orf141 (ENSMMMG00000023899) #31	CPXM1 (ENSMMMG00000023898) #32	EBF4 (ENSMMMG00000023897) #33	IDH3B (ENSMMMG00000023896) #34
Eurasian red squirrel	MODERN SPECIES	11	CENPB (ENSSVLG00005007124) #7	SPEF1 (ENSSVLG00005007146) #8	ADISSP (ENSSVLG00005007194) #9	HSPA12B (ENSSVLG00005007213) #11	SIGLEC1 (ENSSVLG00005007295) #12	ENSSVLG00005007386 #13	ENSSVLG00005007424 #15	GFRA4 (ENSSVLG00005007530) #14	ENSSVLG00005007589 #15	DNAAF9 (ENSSVLG00005007901) #16	ENSSVLG00005007979	SLC4A11 (ENSSVLG00005008082) #17	ITPA (ENSSVLG00005008517) #18	DDRGK1 (ENSSVLG00005008587) #19	LZTS3 (ENSSVLG00005008683) #20	UBOX5 (ENSSVLG00005008732) #22	AVP (ENSSVLG00005008767) #23	ENSSVLG00005008791 #24	ENSSVLG00005008834	ENSSVLG00005008884 #24	ENSSVLG00005008922 #24	ENSSVLG00005008985 #24	MRPS26 (ENSSVLG00005009025) #25	GNRH2 (ENSSVLG00005009052)	PTPRA (ENSSVLG00005009119) #26	VPS16 (ENSSVLG00005009245) #27	PCED1A (ENSSVLG00005009512) #28	TMEM239 (ENSSVLG00005009555) #29	C20orf141 (ENSSVLG00005009574) #31	CPXM1 (ENSSVLG00005009609) #32	EBF4 (ENSSVLG00005009723) #33
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT01100000266557	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00390000005119	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT01100000266557	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37	ENSGT01050000244866.A.a.a.a.a
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT01100000266557	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT01030000234607.A.a.b.b #21	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.b #23	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00940000165014 #30	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37	ENSGT01050000244866.A.a.a.a.a
Long-tailed chinchilla	MODERN SPECIES	122	CENPB (ENSCLAG00000017935) #7	SPEF1 (ENSCLAG00000013471) #8	ADISSP (ENSCLAG00000013586) #9	HSPA12B (ENSCLAG00000011219) #11	SIGLEC1 (ENSCLAG00000013751) #12	ADAM33 (ENSCLAG00000011084) #13	ENSCLAG00000009584	ATRN (ENSCLAG00000010887) #15	ENSCLAG00000012573	DNAAF9 (ENSCLAG00000013491) #16	SLC4A11 (ENSCLAG00000012612) #17	ITPA (ENSCLAG00000012396) #18	DDRGK1 (ENSCLAG00000012959) #19	LZTS3 (ENSCLAG00000010167) #20	FASTKD5 (ENSCLAG00000017812) #21	UBOX5 (ENSCLAG00000012136) #22	MRPS26 (ENSCLAG00000011719) #25	PTPRA (ENSCLAG00000014599) #26	VPS16 (ENSCLAG00000010899) #27	PCED1A (ENSCLAG00000010239) #28	TMEM239 (ENSCLAG00000010005) #29	ENSCLAG00000009947 #30	CPXM1 (ENSCLAG00000010049) #32	EBF4 (ENSCLAG00000016129) #33	IDH3B (ENSCLAG00000012613) #34	NOP56 (ENSCLAG00000013816) #35	TMC2 (ENSCLAG00000013446) #36	SNRPB (ENSCLAG00000012442) #37	TGM6 (ENSCLAG00000012346)	TGM3 (ENSCLAG00000010817)	STK35 (ENSCLAG00000010739)
Degu	MODERN SPECIES	101	SPEF1 (ENSODEG00000005543) #8	ADISSP (ENSODEG00000006785) #9	HSPA12B (ENSODEG00000006345) #11	SIGLEC1 (ENSODEG00000005702) #12	GFRA4 (ENSODEG00000006159) #14	ENSODEG00000005788	ATRN (ENSODEG00000004625) #15	ENSODEG00000005518	DNAAF9 (ENSODEG00000005205) #16	SLC4A11 (ENSODEG00000006000) #17	ITPA (ENSODEG00000005202) #18	DDRGK1 (ENSODEG00000005502) #19	LZTS3 (ENSODEG00000006348) #20	ENSODEG00000019287	FASTKD5 (ENSODEG00000005773) #21	UBOX5 (ENSODEG00000006821) #22	AVP (ENSODEG00000006589) #23	ENSODEG00000004605 #24	MRPS26 (ENSODEG00000004501) #25	PTPRA (ENSODEG00000005651) #26	VPS16 (ENSODEG00000004474) #27	PCED1A (ENSODEG00000005153) #28	ENSODEG00000004687 #30	CPXM1 (ENSODEG00000005511) #32	EBF4 (ENSODEG00000005079) #33	IDH3B (ENSODEG00000006040) #34	ENSODEG00000005708 #35	ENSODEG00000005500 #35	TMC2 (ENSODEG00000004874) #36	ENSODEG00000004305 #37	TGM6 (ENSODEG00000008085)
Guinea pig	MODERN SPECIES	8	AP5S1 (ENSCPOG00000034150)	CDC25B (ENSCPOG00000007223)	CENPB (ENSCPOG00000007221) #7	SPEF1 (ENSCPOG00000035881) #8	ADISSP (ENSCPOG00000007216) #9	HSPA12B (ENSCPOG00000007213) #11	SIGLEC1 (ENSCPOG00000007205) #12	ADAM33 (ENSCPOG00000019634) #13	GFRA4 (ENSCPOG00000034307) #14	ATRN (ENSCPOG00000007193) #15	DNAAF9 (ENSCPOG00000038300) #16	SLC4A11 (ENSCPOG00000001277) #17	ITPA (ENSCPOG00000039557) #18	DDRGK1 (ENSCPOG00000001272) #19	LZTS3 (ENSCPOG00000034395) #20	UBOX5 (ENSCPOG00000020493) #22	FASTKD5 (ENSCPOG00000023356) #21	AVP (ENSCPOG00000023592) #23	ENSCPOG00000001717 #24	MRPS26 (ENSCPOG00000037912) #25	PTPRA (ENSCPOG00000020873) #26	VPS16 (ENSCPOG00000003602) #27	PCED1A (ENSCPOG00000025475) #28	CPXM1 (ENSCPOG00000011936) #32	EBF4 (ENSCPOG00000004862) #33	IDH3B (ENSCPOG00000015319) #34	NOP56 (ENSCPOG00000015315) #35	TMC2 (ENSCPOG00000015312) #36	SNRPB (ENSCPOG00000039408) #37	TGM6 (ENSCPOG00000015309)	TGM3 (ENSCPOG00000015307)
Lagomorpha	ANCESTRAL SPECIES	67	ENSGT00390000013178	ENSGT00940000158524	ENSGT00940000162810 #7	ENSGT00910000144159.A.a #8	ENSGT00390000008711 #9	ENSGT00940000159032 #11	ENSGT01100000263535.a.a #12	ENSGT00940000158971 #13	ENSGT00940000160491 #14	ENSGT00940000157346 #15	ENSGT00390000003692 #16	ENSGT00940000154894 #17	ENSGT00390000015399 #18	ENSGT00390000017193 #19	ENSGT00940000154078.b #20	ENSGT00510000049555 #22	ENSGT00390000004511.d.a.a #24	ENSGT00390000008453 #25	ENSGT00390000004511.d.a.b #23	ENSGT00940000159585 #26	ENSGT00390000003896 #27	ENSGT00390000002231.c #28	ENSGT00390000005090 #29	ENSGT00910000144368 #31	ENSGT00940000156141.C #32	ENSGT00950000182859.A.a.a.a #33	ENSGT00950000182989.D.a.b #34	ENSGT00940000153534.B #35	ENSGT01050000244942.b.a.b #36	ENSGT00940000155052.e.a #37	ENSGT01050000244866.A.a.a.a.a
Rabbit	MODERN SPECIES	15	AP5S1 (ENSOCUG00000011213)	ENSOCUG00000013659	ENSOCUG00000036420 #7	SPEF1 (ENSOCUG00000003498) #8	ENSOCUG00000012726 #9	HSPA12B (ENSOCUG00000012719) #11	SIGLEC1 (ENSOCUG00000012702) #12	ADAM33 (ENSOCUG00000012683) #13	ENSOCUG00000012675 #14	ATRN (ENSOCUG00000012655) #15	DNAAF9 (ENSOCUG00000025410) #16	SLC4A11 (ENSOCUG00000004077) #17	ITPA (ENSOCUG00000004070) #18	DDRGK1 (ENSOCUG00000012618) #19	LZTS3 (ENSOCUG00000004066) #20	UBOX5 (ENSOCUG00000026346) #22	ENSOCUG00000008352 #24	MRPS26 (ENSOCUG00000012218) #25	ENSOCUG00000032897	ENSOCUG00000001769 #23	PTPRA (ENSOCUG00000021376) #26	VPS16 (ENSOCUG00000012371) #27	PCED1A (ENSOCUG00000014939) #28	ENSOCUG00000007314 #29	CPXM1 (ENSOCUG00000006186) #32	EBF4 (ENSOCUG00000023917) #33	IDH3B (ENSOCUG00000024051) #34	NOP56 (ENSOCUG00000014960) #35	TMC2 (ENSOCUG00000014078) #36	ENSOCUG00000006902	ENSOCUG00000014042 #37
Pika	MODERN SPECIES	1172											DNAAF9 (ENSOPRG00000015087) #16	SLC4A11 (ENSOPRG00000015043) #17	ITPA (ENSOPRG00000015022) #18	DDRGK1 (ENSOPRG00000015004) #19	LZTS3 (ENSOPRG00000014988) #20	UBOX5 (ENSOPRG00000018916) #22	AVP (ENSOPRG00000014980) #23	ENSOPRG00000014962 #24	ENSOPRG00000014944	PTPRA (ENSOPRG00000018434) #26