Percora_a	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.w.b #7	ENSGT00940000154646.C.j.b.a #8	ENSGT00940000154646.C.j.b.b #9	ENSGT00940000155021.n #13	ENSGT00940000154646.C.j.a.b #11	ENSGT00940000163407	ENSGT00940000154646.C.j.a.a.a #12	ENSGT00940000161507 #14	ENSGT00940000158718 #15	ENSGT00940000161423 #16	ENSGT00940000159979 #17	ENSGT00530000063777.a.a.a #18	ENSGT00530000063777.a.a.b #19	ENSGT00940000162790.a #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g #26	ENSGT00940000162852.a.h #27	ENSGT00940000162117 #28	ENSGT00390000003207 #29	ENSGT00940000159972 #30	ENSGT00940000162084.ab.a	ENSGT00940000164424 #31	ENSGT00950000183216.d.a.a.b.a.b.b.a.a	ENSGT00940000164217.b ##32	ENSGT00940000164217.a.b.b ##32	ENSGT00940000163881.a.b	ENSGT00940000163881.a.a
Bovidae	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.w.b #7	ENSGT00940000154646.C.j.b.a #8	ENSGT00940000154646.C.j.b.b #9	ENSGT00940000154646.C.j.a.a.b #10	ENSGT00940000154646.C.j.a.b #11	ENSGT00940000163407	ENSGT00940000155021.n #13	ENSGT00940000161507 #14	ENSGT00940000158718 #15	ENSGT00940000161423 #16	ENSGT00940000159979 #17	ENSGT00530000063777.a.a.a #18	ENSGT00530000063777.a.a.b #19	ENSGT00940000162790.a #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g #26	ENSGT00940000162852.a.h #27	ENSGT00940000162117 #28	ENSGT00390000003207 #29	ENSGT00940000159972 #30	ENSGT00940000162084.ab.a	ENSGT00940000164424 #31	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b #32	ENSGT00940000163881.b	ENSGT00940000164217.a.a.a ##32	ENSGT00940000162084.ab.b
Caprinae	ANCESTRAL SPECIES	32	ENSGT01100000263561.C.d.a.w.b #7	ENSGT00940000154646.C.j.b.a #8	ENSGT00940000154646.C.j.b.b #9	ENSGT00940000154646.C.j.a.a.b #10	ENSGT00940000154646.C.j.a.b #11	ENSGT00940000154646.C.j.a.a.a #12	ENSGT00940000155021.n #13	ENSGT00940000161507 #14	ENSGT00940000158718 #15	ENSGT00940000161423 #16	ENSGT00940000159979 #17	ENSGT00530000063777.a.a.a #18	ENSGT00530000063777.a.a.b #19	ENSGT00940000162790.a #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g #26	ENSGT00940000162852.a.h #27	ENSGT00940000162117 #28	ENSGT00390000003207 #29	ENSGT00940000159972 #30	ENSGT00940000162084.ab.a	ENSGT00940000164424 #31	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b #32
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020002873 #7	CYP4F21 (ENSOARG00020002888) #8	ENSOARG00020002924 #9	ENSOARG00020002976 #10	ENSOARG00020003031 #11	ENSOARG00020003101 #12	CYP4F8 (ENSOARG00020003149) #13	CYP4F22 (ENSOARG00020003197) #14	PGLYRP2 (ENSOARG00020003263) #15	RASAL3 (ENSOARG00020003296) #16	WIZ (ENSOARG00020003398) #17	AKAP8L (ENSOARG00020003575) #18	AKAP8 (ENSOARG00020003610) #19	ENSOARG00020003710 #20	EPHX3 (ENSOARG00020003764) #21	NOTCH3 (ENSOARG00020003788) #22	ILVBL (ENSOARG00020003902) #23	SYDE1 (ENSOARG00020003935) #24	ENSOARG00020003985 #25	ENSOARG00020004002 #26	ENSOARG00020004010 #27	CASP14 (ENSOARG00020004027) #28	CCDC105 (ENSOARG00020004053) #29	SLC1A6 (ENSOARG00020004107) #30	ENSOARG00020004265 #31	ENSOARG00020004277 #32	EPHA6 (ENSOARG00020004299) #33	ENSOARG00020004413 #34	ARL6 (ENSOARG00020004425) #35	CRYBG3 (ENSOARG00020004464) #36	RIOX2 (ENSOARG00020004577) #37
Goat	MODERN SPECIES	26	ENSCHIG00000013080 #8	ENSCHIG00000025031 #9	CYP4F47 (ENSCHIG00000017873) #10	ENSCHIG00000026583 #11	ENSCHIG00000013525 #12	ENSCHIG00000018329 ##12	CYP4F50 (ENSCHIG00000023790) #13	CYP4F22 (ENSCHIG00000009101) #14	PGLYRP2 (ENSCHIG00000017394) #15	RASAL3 (ENSCHIG00000018235) #16	WIZ (ENSCHIG00000018501) #17	AKAP8L (ENSCHIG00000005712) #18	AKAP8 (ENSCHIG00000008591) #19	ENSCHIG00000018824 #20	EPHX3 (ENSCHIG00000025579) #21	NOTCH3 (ENSCHIG00000016952) #22	ENSCHIG00000024762	ILVBL (ENSCHIG00000018122) #23	SYDE1 (ENSCHIG00000024359) #24	CASP14 (ENSCHIG00000018930) #28	CCDC105 (ENSCHIG00000018189) #29	SLC1A6 (ENSCHIG00000009680) #30	ENSCHIG00000009123	ENSCHIG00000002566	ENSCHIG00000010747 #31	ENSCHIG00000018910	ENSCHIG00000011586 #32	ENSCHIG00000016401	ENSCHIG00000007437	ENSCHIG00000015155	ENSCHIG00000008365
Bovinae	ANCESTRAL SPECIES	34	ENSGT01100000263561.C.d.a.w.b #7	ENSGT00940000154646.C.j.b.a #8	ENSGT00940000154646.C.j.b.b #9	ENSGT00940000154646.C.j.a.a.b #10	ENSGT00940000154646.C.j.a.b #11	ENSGT00940000163407.j	ENSGT00940000155021.n #13	ENSGT00940000161507 #14	ENSGT00940000158718 #15	ENSGT00940000161423 #16	ENSGT00940000159979 #17	ENSGT00530000063777.a.a.a #18	ENSGT00530000063777.a.a.b #19	ENSGT00940000162790.a #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g.c #26	ENSGT00940000162852.a.g.d #26	ENSGT00940000162852.a.h #27	ENSGT00940000162117 #28	ENSGT00390000003207 #29	ENSGT00940000159972 #30	ENSGT00940000162084.ab.a	ENSGT00940000164424 #31	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b #32	ENSGT00940000163881.b	ENSGT00950000183216.d.a.a.b.b.c.a
Bos	ANCESTRAL SPECIES	34	ENSGT00940000154646.C.j.b.a #8	ENSGT00940000154646.C.j.b.b #9	ENSGT00940000154646.C.j.a.a.b #10	ENSGT00940000154646.C.j.a.b #11	ENSGT00940000163407.j	ENSGT00940000155021.n #13	ENSGT00940000161507 #14	ENSGT00940000158718 #15	ENSGT00940000161423 #16	ENSGT00940000159979 #17	ENSGT00530000063777.a.a.a #18	ENSGT00530000063777.a.a.b #19	ENSGT01090000260395	ENSGT00940000162790.a #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g.c #26	ENSGT00940000162852.a.g.d #26	ENSGT00940000162852.a.h #27	ENSGT00940000162117 #28	ENSGT00390000003207 #29	ENSGT00940000159972.b #30	ENSGT00940000162084.ab.a	ENSGT00940000164424 #31	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b #32	ENSGT00940000163881.b	ENSGT00950000183216.d.a.a.b.b.c.a
Bos_b	ANCESTRAL SPECIES	36	ENSGT01100000263561.C.d.b.a.h.a.b ##7	ENSGT01060000248581.A.b.h.a.a	ENSGT01100000263561.C.d.a.w.b #7	ENSGT00940000154646.C.j.b.b #9	ENSGT00940000154646.C.j.a.a.b #10	ENSGT00940000154646.C.j.a.b #11	ENSGT00940000154646.C.j.a.a.a #12	ENSGT00940000161507 #14	ENSGT00940000158718 #15	ENSGT00940000161423 #16	ENSGT00940000159979 #17	ENSGT00530000063777.a.a.a #18	ENSGT01090000260395	ENSGT00940000162790.a #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000160625.k.a.a.a	ENSGT00940000158035.i #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g.c #26	ENSGT00940000162852.a.g.d #26	ENSGT00940000162852.a.h #27	ENSGT00940000162117 #28	ENSGT00390000003207 #29	ENSGT00940000159972.b #30	ENSGT00940000162084.ab.a	ENSGT00940000164424 #31	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b #32	ENSGT00940000163881.b	ENSGT00950000183216.d.a.a.b.b.c.a.b
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005007326	ENSBIXG00005016739 ##7	ENSBIXG00005016754 ##7	ENSBIXG00005016768 ##7	ENSBIXG00005016779	ENSBIXG00005016792 #7	ENSBIXG00005016875	ENSBIXG00005017209 #14	PGLYRP2 (ENSBIXG00005017307) #15	RASAL3 (ENSBIXG00005017336) #16	WIZ (ENSBIXG00005007800) #17	AKAP8L (ENSBIXG00005017527) #18	ENSBIXG00005017556	ENSBIXG00005005428 #20	EPHX3 (ENSBIXG00005017692) #21	NOTCH3 (ENSBIXG00005018312) #22	ENSBIXG00005018407	ILVBL (ENSBIXG00005018455) #23	SYDE1 (ENSBIXG00005018485) #24	ENSBIXG00005018496 #26	ENSBIXG00005018505 #26	ENSBIXG00005018514 #27	CASP14 (ENSBIXG00005007720) #28	CCDC105 (ENSBIXG00005018555) #29	SLC1A6 (ENSBIXG00005005854) #30	ENSBIXG00005018622	ENSBIXG00005003016 #31	ENSBIXG00005018652 #32	ENSBIXG00005003027	ENSBIXG00005006588	ENSBIXG00005018699
Cow	MODERN SPECIES	26	OR10H4N (ENSBTAG00000050551) ##7	OR10H1I (ENSBTAG00000006216) #7	CYP4F2 (ENSBTAG00000039319) #9	CYP4F47 (ENSBTAG00000038549) #10	ENSBTAG00000039337 #11	CYP4F2 (ENSBTAG00000025748) #12	ENSBTAG00000048257 #14	PGLYRP2 (ENSBTAG00000012280) #15	RASAL3 (ENSBTAG00000011602) #16	WIZ (ENSBTAG00000010450) #17	AKAP8L (ENSBTAG00000010439) #18	AKAP8 (ENSBTAG00000001807)	BRD4 (ENSBTAG00000002495) #20	ENSBTAG00000054865 #20	EPHX3 (ENSBTAG00000020090) #21	NOTCH3 (ENSBTAG00000043971) #22	OR10B1P (ENSBTAG00000040305)	ILVBL (ENSBTAG00000015186) #23	SYDE1 (ENSBTAG00000015184) #24	OR1I4 (ENSBTAG00000054699) #26	OR1I1 (ENSBTAG00000053862) #26	OR1I3 (ENSBTAG00000011496) #27	CASP14 (ENSBTAG00000021106) #28	CCDC105 (ENSBTAG00000020615) #29	SLC1A6 (ENSBTAG00000013502) #30	ENSBTAG00000053903 #30	OR7C19 (ENSBTAG00000039533) #31	OR7A85 (ENSBTAG00000055037)	ENSBTAG00000051946 #32	OR7A65 (ENSBTAG00000049846)	OR7A100 (ENSBTAG00000036175)
Bos_a	ANCESTRAL SPECIES	29	ENSGT01060000248581.A.b.h.a.a	ENSGT01100000263561.C.d.a.w.b #7	ENSGT00940000154646.C.j.b.a #8	ENSGT00940000154646.C.j.b.b #9	ENSGT00940000154646.C.j.a.b #11	ENSGT00940000163407.j	ENSGT00940000155021.n #13	ENSGT00940000161507 #14	ENSGT00940000158718 #15	ENSGT00940000161423 #16	ENSGT00940000159979 #17	ENSGT00530000063777.a.a.a #18	ENSGT00530000063777.a.a.b #19	ENSGT00940000162790.a #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000160625.k.a.a.a	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g.c #26	ENSGT00940000162852.a.g.d #26	ENSGT00940000162852.a.h #27	ENSGT00940000162117 #28	ENSGT00390000003207 #29	ENSGT00940000159972.b #30	ENSGT00940000164424 #31	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b #32	ENSGT00940000164217.a.b.b ##32	ENSGT00940000163881.a.b	ENSGT00940000163881.a.a
Wild yak	MODERN SPECIES	1619	ENSBMUG00000011552 #7	ENSBMUG00000011627 #8	ENSBMUG00000011731 #9	ENSBMUG00000011774 #11	ENSBMUG00000011822	ENSBMUG00000011875 #13	CYP4F22 (ENSBMUG00000011890) #14	PGLYRP2 (ENSBMUG00000011932) #15	RASAL3 (ENSBMUG00000011972) #16	WIZ (ENSBMUG00000012029) #17	AKAP8L (ENSBMUG00000012103) #18	AKAP8 (ENSBMUG00000012119) #19	ENSBMUG00000012134	ENSBMUG00000012143 #20	EPHX3 (ENSBMUG00000012149) #21	NOTCH3 (ENSBMUG00000013018) #22	ENSBMUG00000013201	ILVBL (ENSBMUG00000013223) #23	ENSBMUG00000013242 #24	ENSBMUG00000013258 #26	ENSBMUG00000013277 #26	ENSBMUG00000013302 #27	CASP14 (ENSBMUG00000013317) #28	CCDC105 (ENSBMUG00000013339) #29	ENSBMUG00000013356 #30	ENSBMUG00000013368 #30	ENSBMUG00000013377 #31	ENSBMUG00000013410 #32	ENSBMUG00000013424 ##32	ENSBMUG00000013439	ENSBMUG00000013451
Domestic yak	MODERN SPECIES	27	ENSBGRG00000024273 #7	ENSBGRG00000024190 #8	ENSBGRG00000024011 #9	ENSBGRG00000023854 #11	ENSBGRG00000023633	ENSBGRG00000022876 #13	CYP4F22 (ENSBGRG00000022745) #14	PGLYRP2 (ENSBGRG00000022693) #15	RASAL3 (ENSBGRG00000022665) #16	WIZ (ENSBGRG00000022240) #17	AKAP8L (ENSBGRG00000022043) #18	AKAP8 (ENSBGRG00000021898) #19	ENSBGRG00000021854	ENSBGRG00000021799 #20	EPHX3 (ENSBGRG00000021673) #21	NOTCH3 (ENSBGRG00000018066) #22	ENSBGRG00000017844	ILVBL (ENSBGRG00000017727) #23	SYDE1 (ENSBGRG00000017591) #24	ENSBGRG00000017568 #26	ENSBGRG00000017455 #27	CASP14 (ENSBGRG00000017337) #28	CCDC105 (ENSBGRG00000017152) #29	SLC1A6 (ENSBGRG00000016741) #30	ENSBGRG00000016668 #31	ENSBGRG00000016627	ENSBGRG00000016606 #32	ENSBGRG00000016595 ##32	ENSBGRG00000016543	ENSBGRG00000016482	ENSBGRG00000016374
American bison	MODERN SPECIES	2949	ENSBBBG00000005267 #8	ENSBBBG00000019421 #9	ENSBBBG00000019301 #13	ENSBBBG00000004997	ENSBBBG00000019258	ENSBBBG00000019218 #13	CYP4F22 (ENSBBBG00000019200) #14	PGLYRP2 (ENSBBBG00000019179) #15	RASAL3 (ENSBBBG00000019162) #16	WIZ (ENSBBBG00000019139) #17	AKAP8L (ENSBBBG00000019046) #18	AKAP8 (ENSBBBG00000019017) #19	ENSBBBG00000018997 #20	ENSBBBG00000004833 #20	EPHX3 (ENSBBBG00000008462) #21	NOTCH3 (ENSBBBG00000018967) #22
Siberian musk deer	MODERN SPECIES	1231	ENSMMSG00000022115 #7	ENSMMSG00000022082 #8	ENSMMSG00000021590 #9	ENSMMSG00000021505 #13	ENSMMSG00000021394 #11	ENSMMSG00000021267 #12	CYP4F8 (ENSMMSG00000021203) #13	CYP4F22 (ENSMMSG00000021161) #14	PGLYRP2 (ENSMMSG00000021135) #15	RASAL3 (ENSMMSG00000021048) #16	WIZ (ENSMMSG00000020867) #17	AKAP8L (ENSMMSG00000020810) #18	AKAP8 (ENSMMSG00000020727) #19	ENSMMSG00000020672 #20	EPHX3 (ENSMMSG00000020636) #21	NOTCH3 (ENSMMSG00000020568) #22	ILVBL (ENSMMSG00000020513) #23	SYDE1 (ENSMMSG00000020491) #24	CASP14 (ENSMMSG00000020464) #28	CCDC105 (ENSMMSG00000020444) #29	SLC1A6 (ENSMMSG00000020353) #30	OR7C2 (ENSMMSG00000020334)	ENSMMSG00000020323 #31	ENSMMSG00000020311	ENSMMSG00000020301 ##32	ENSMMSG00000020295 #32	ENSMMSG00000020279 ##32	ENSMMSG00000020227	ENSMMSG00000020206	ENSMMSG00000020184	ENSMMSG00000020166