Euteleostomi	ANCESTRAL SPECIES	933																ENSGT00940000160234 #22	ENSGT00390000005065	ENSGT00940000163377.a.b
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00940000160234 #22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00940000160234 #22
Amniota	ANCESTRAL SPECIES																	ENSGT00940000160234 #22
Mammalia	ANCESTRAL SPECIES																	ENSGT00940000160234 #22
Theria	ANCESTRAL SPECIES	29	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT00940000155021.m.b.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT01090000260395	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000155021.n #14	ENSGT00940000162906.c.a	ENSGT01100000263561.C	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a
Eutheria	ANCESTRAL SPECIES	24	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT00940000155021.m.b.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT01090000260395	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216 #30	ENSGT00950000183069	ENSGT00940000162163	ENSGT00940000161354	ENSGT00940000159125	ENSGT00940000154130.a.a.a
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000164421 #11	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523 #31	ENSGT00950000183216.d #30	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT01100000263561.C.d.a	ENSGT01100000263561.C.d.b.a	ENSGT00940000164421 #11	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.c.b.a ##30	ENSGT00940000164720	ENSGT00950000183069.b	ENSGT00940000164424	ENSGT00940000153523 #31	ENSGT00950000183216.d #30
Primates	ANCESTRAL SPECIES	18	ENSGT01090000260018.B.a.a	ENSGT00940000163407 #12	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523 #31	ENSGT00950000183216.d #30	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000163407 #12	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a	ENSGT01100000263561.C.d.b.a	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523 #31	ENSGT00950000183216.d #30	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b
Simiiformes	ANCESTRAL SPECIES	13	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a	ENSGT00940000154646.C.n.b	ENSGT00940000164421 #11	ENSGT00940000163718	ENSGT00940000154646.C.n.a	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d #30	ENSGT00940000153523 #31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b
Catarrhini	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.b.b	ENSGT01100000263561.C.d.b.a	ENSGT00940000154646.C.m	ENSGT00940000163718.a.a	ENSGT00940000154646.C.n.a	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.j ##31	ENSGT00950000183216.d #30	ENSGT00940000153523.i.b ##31	ENSGT00940000153523.i.a.a.a ##31	ENSGT00940000162084 #32	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT01100000263561.C.d.b.a	ENSGT00940000164421.d ##11	ENSGT00940000163718.a.a	ENSGT00940000154646.C.n.a	ENSGT00940000155021.n.e ##14	ENSGT00940000155021.n.f #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.j ##31	ENSGT00950000183216.d #30	ENSGT00940000153523.i.b ##31	ENSGT00940000153523.i.a.a.b #31	ENSGT00940000153523.i.a.b ##31	ENSGT00940000162084 #32	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT01100000263561.C.d.b.a	ENSGT00940000164421.d ##11	ENSGT00940000163718.a.a.b	ENSGT00940000154646.C.n.a	ENSGT00940000155021.n.e ##14	ENSGT00940000155021.n.f #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.j ##31	ENSGT00950000183216.d #30	ENSGT00940000153523.i.b ##31	ENSGT00940000153523.i.a.a.b #31	ENSGT00940000153523.i.a.b ##31	ENSGT00940000162084 #32	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b.u #9	ENSGT01060000248581.A.b.l #10	ENSGT00940000164421.c #11	ENSGT01100000263561.C.d.b.a	ENSGT00940000155021.n.f #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.j ##31	ENSGT00950000183216.d #30	ENSGT00940000153523.i.b ##31	ENSGT00940000153523.i.a.a.b #31	ENSGT00940000153523.i.a.b ##31	ENSGT00940000162084 #32	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT01030000234542.b.b.a.a.a.b.u #9	ENSGT01060000248581.A.b.l #10	ENSGT00940000164421.c #11	ENSGT00940000154646.C.n.b	ENSGT00940000154227.b	ENSGT00940000155021.n.f #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d #30	ENSGT00940000153523.i.b ##31	ENSGT00940000153523.i.a.a.b #31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759
Olive baboon	MODERN SPECIES	12	HSH2D (ENSPANG00000050187) #7	RAB8A (ENSPANG00000031542) #8	ENSPANG00000008105 #9	ENSPANG00000005591 #10	CYP4F11 (ENSPANG00000045986) #11	CYP4F3 (ENSPANG00000043184) #12	ENSPANG00000049519 #13	ENSPANG00000044359 #14	CYP4F22 (ENSPANG00000015625) #15	PGLYRP2 (ENSPANG00000009960) #16	RASAL3 (ENSPANG00000006034) #17	WIZ (ENSPANG00000014329) #18	AKAP8L (ENSPANG00000015626) #19	BRD4 (ENSPANG00000023924) #20	EPHX3 (ENSPANG00000039806) #21	NOTCH3 (ENSPANG00000016653) #22	ILVBL (ENSPANG00000019933) #23	SYDE1 (ENSPANG00000010522) #24	OR1I1 (ENSPANG00000039991) #25	CASP14 (ENSPANG00000003163) #26	CCDC105 (ENSPANG00000010975) #27	SLC1A6 (ENSPANG00000017791) #28	OR7C2 (ENSPANG00000042632) #29	ENSPANG00000046221 #30	ENSPANG00000008166 #31	OR7C1 (ENSPANG00000050573) #32	ADGRE2 (ENSPANG00000011401) #33	ZNF333 (ENSPANG00000029285) #34	ENSPANG00000049867 #35	DDX39A (ENSPANG00000015036) #36	ADGRE3 (ENSPANG00000019561) #37
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00940000154646.C.n.b	ENSGT00940000154227.b	ENSGT00940000163718.a.a.a.a.b	ENSGT00940000163718.a.a.b	ENSGT00940000154646.C.n.a	ENSGT00940000155021.n.e ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687.b	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00950000183216.d #30	ENSGT00940000153523.i.b ##31	ENSGT00940000153523.i.a.a.b #31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b.p	ENSGT00940000160312.e
Drill	MODERN SPECIES	794	CYP4F2 (ENSMLEG00000028150)	ENSMLEG00000030815	ENSMLEG00000030773	CYP4F57 (ENSMLEG00000042467)	CYP4F3 (ENSMLEG00000036348) #12	CYP4F8 (ENSMLEG00000038600) ##14	CYP4F22 (ENSMLEG00000035331) #15	PGLYRP2 (ENSMLEG00000043385) #16	RASAL3 (ENSMLEG00000040923) #17	WIZ (ENSMLEG00000039726) #18	ENSMLEG00000026487	AKAP8L (ENSMLEG00000035928) #19	AKAP8 (ENSMLEG00000034735) ##19	BRD4 (ENSMLEG00000040205) #20	EPHX3 (ENSMLEG00000043638) #21	NOTCH3 (ENSMLEG00000030516) #22	ILVBL (ENSMLEG00000043182) #23	SYDE1 (ENSMLEG00000042744) #24	CASP14 (ENSMLEG00000041460) #26	CCDC105 (ENSMLEG00000042868) #27	SLC1A6 (ENSMLEG00000000068) #28	ENSMLEG00000030038 #30	ENSMLEG00000018854 ##31	ENSMLEG00000022381 #31
Sooty mangabey	MODERN SPECIES	347	ENSCATG00000039895	ENSCATG00000036903	ENSCATG00000037787	ENSCATG00000042538	CYP4F57 (ENSCATG00000033277)	CYP4F3 (ENSCATG00000044103)	CYP4F8 (ENSCATG00000041673) ##14	CYP4F22 (ENSCATG00000032634) #15	PGLYRP2 (ENSCATG00000038760) #16	RASAL3 (ENSCATG00000031261) #17	WIZ (ENSCATG00000038696) #18	AKAP8L (ENSCATG00000039160) #19	AKAP8 (ENSCATG00000043874) ##19	BRD4 (ENSCATG00000003569) #20	EPHX3 (ENSCATG00000038217) #21	NOTCH3 (ENSCATG00000043609) #22	ILVBL (ENSCATG00000043839) #23	SYDE1 (ENSCATG00000041995) #24	CASP14 (ENSCATG00000032046) #26	CCDC105 (ENSCATG00000037737) #27	SLC1A6 (ENSCATG00000017966) #28	ENSCATG00000006773 ##31	ENSCATG00000022243 #31	ADGRE2 (ENSCATG00000031382) #33	ZNF333 (ENSCATG00000038104) #34	ADGRE3 (ENSCATG00000032364) #37	CLEC17A (ENSCATG00000033974)	NDUFB7 (ENSCATG00000033707)	ENSCATG00000043025	DNAJB1 (ENSCATG00000042394)	GIPC1 (ENSCATG00000041252)
Macaca	ANCESTRAL SPECIES	21	ENSGT01030000234542.b.b.a.a.a.b.u #9	ENSGT01060000248581.A.b.l #10	ENSGT00940000164421.c #11	ENSGT01100000263561.C.d.b.a	ENSGT00940000164421.d ##11	ENSGT01060000248581.A.b.k ##10	ENSGT00940000154646.C.n.a	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.j ##31	ENSGT00950000183216.d #30	ENSGT00940000153523.i.b ##31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b.p
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000164421.c #11	ENSGT01100000263561.C.d.a.a	ENSGT01100000263561.C.d.a.b.a	ENSGT00940000164421.d ##11	ENSGT01060000248581.A.b.k ##10	ENSGT00940000154646.C.n.a	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000153385.b.a.b.pc	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207.a #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.j ##31	ENSGT00950000183216.d #30	ENSGT00940000153523.i.b ##31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b.p
Rhesus	MODERN SPECIES	10	CYP4F11 (ENSMMUG00000039592) ##11	ENSMMUG00000064109	ENSMMUG00000028859 ##10	CYP4F8 (ENSMMUG00000010734)	CYP4F22 (ENSMMUG00000016996) #15	PGLYRP2 (ENSMMUG00000003031) #16	RASAL3 (ENSMMUG00000003030) #17	ENSMMUG00000053190 #18	ENSMMUG00000017989 #18	WIZ (ENSMMUG00000028863) #18	AKAP8L (ENSMMUG00000017984) #19	AKAP8 (ENSMMUG00000051452) ##19	ENSMMUG00000062848	BRD4 (ENSMMUG00000021382)	EPHX3 (ENSMMUG00000021384) #21	NOTCH3 (ENSMMUG00000013637) #22	ILVBL (ENSMMUG00000007729) #23	SYDE1 (ENSMMUG00000007726) #24	OR1I1 (ENSMMUG00000053220) #25	CASP14 (ENSMMUG00000053457) #26	ENSMMUG00000013758 #27	SLC1A6 (ENSMMUG00000001735) #28	OR7C2 (ENSMMUG00000059377) #32	ENSMMUG00000058217 #30	ENSMMUG00000064639 ##31	ENSMMUG00000063342 #31	OR7A10 (ENSMMUG00000050032) ##31	OR7C1 (ENSMMUG00000053889) #32	ENSMMUG00000060289	ZNF333 (ENSMMUG00000020653) #34	ADGRE2 (ENSMMUG00000018932) #33
Pig-tailed macaque	MODERN SPECIES	76	HSH2D (ENSMNEG00000035610) #7	RAB8A (ENSMNEG00000044260) #8	ENSMNEG00000044357 #9	CYP4F11 (ENSMNEG00000006547) #11	ENSMNEG00000026973	CYP4F12 (ENSMNEG00000034120)	ENSMNEG00000044692	CYP4F22 (ENSMNEG00000035906) #15	PGLYRP2 (ENSMNEG00000041939) #16	RASAL3 (ENSMNEG00000043636) #17	WIZ (ENSMNEG00000028400) #18	AKAP8L (ENSMNEG00000043813) #19	AKAP8 (ENSMNEG00000032407) ##19	BRD4 (ENSMNEG00000030222) #20	EPHX3 (ENSMNEG00000036655) #21	NOTCH3 (ENSMNEG00000034126) #22	ILVBL (ENSMNEG00000045029) #23	SYDE1 (ENSMNEG00000043619) #24	CASP14 (ENSMNEG00000036154) #26	CCDC105 (ENSMNEG00000035529) #27	SLC1A6 (ENSMNEG00000038083) #28	OR7A5 (ENSMNEG00000023698) ##31	ENSMNEG00000028698 #30	ENSMNEG00000000074 ##31	ADGRE2 (ENSMNEG00000044437) #33	ZNF333 (ENSMNEG00000045472) #34	CLEC17A (ENSMNEG00000040251)	NDUFB7 (ENSMNEG00000035902)	TECR (ENSMNEG00000041758)	DNAJB1 (ENSMNEG00000010488)	GIPC1 (ENSMNEG00000044957)
Vervet Monkey	MODERN SPECIES	25	ENSCSAG00000018492 #10	OR10H2 (ENSCSAG00000018490)	CYP4F12 (ENSCSAG00000005864)	CYP4F57 (ENSCSAG00000005936)	CYP4F3 (ENSCSAG00000005964)	CYP4F8 (ENSCSAG00000006000) ##14	CYP4F23 (ENSCSAG00000006040) #14	CYP4F22 (ENSCSAG00000006063) #15	PGLYRP2 (ENSCSAG00000006074) #16	RASAL3 (ENSCSAG00000006077) #17	ENSCSAG00000006081 #18	AKAP8L (ENSCSAG00000006087) #19	AKAP8 (ENSCSAG00000006104) ##19	BRD4 (ENSCSAG00000006129) #20	EPHX3 (ENSCSAG00000006139) #21	NOTCH3 (ENSCSAG00000006147) #22	ILVBL (ENSCSAG00000006156) #23	SYDE1 (ENSCSAG00000006166) #24	OR1I1 (ENSCSAG00000018488) #25	CASP14 (ENSCSAG00000006173) #26	CCDC105 (ENSCSAG00000006179) #27	SLC1A6 (ENSCSAG00000006189) #28	OR7C2 (ENSCSAG00000018486) #32	ENSCSAG00000018482 ##31	ENSCSAG00000018479 #31	OR7A10 (ENSCSAG00000006193) ##31	OR7C1 (ENSCSAG00000018477) #32	ADGRE2 (ENSCSAG00000006232) #33	ZNF333 (ENSCSAG00000006261) #34	ADGRE3 (ENSCSAG00000006290) #37	CLEC17A (ENSCSAG00000006309)
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b.w #9	ENSGT00940000154646.C.n.b	ENSGT00940000154646.C.n.a	ENSGT00940000155021.n.e ##14	ENSGT00940000155021.n.f #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b.p	ENSGT00940000160312.e	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a	ENSGT00940000154990
Golden snub-nosed monkey	MODERN SPECIES	975	RAB8A (ENSRROG00000029919) #8	ENSRROG00000036515 #9	CYP4F2 (ENSRROG00000042855)	ENSRROG00000007901	CYP4F8 (ENSRROG00000045470) ##14	ENSRROG00000042447 #14	CYP4F22 (ENSRROG00000040745) #15	PGLYRP2 (ENSRROG00000042767) #16	RASAL3 (ENSRROG00000030890) #17	WIZ (ENSRROG00000035125) #18	ENSRROG00000007607	AKAP8L (ENSRROG00000031937) #19	AKAP8 (ENSRROG00000031442) ##19	BRD4 (ENSRROG00000045546) #20	EPHX3 (ENSRROG00000044137) #21	NOTCH3 (ENSRROG00000044242) #22	ILVBL (ENSRROG00000045749) #23	SYDE1 (ENSRROG00000034672) #24	CASP14 (ENSRROG00000041680) #26	CCDC105 (ENSRROG00000042820) #27	SLC1A6 (ENSRROG00000035827) #28	ADGRE2 (ENSRROG00000034860) #33	ZNF333 (ENSRROG00000039295) #34	ADGRE3 (ENSRROG00000031351) #37	CLEC17A (ENSRROG00000044946)	NDUFB7 (ENSRROG00000034917)	TECR (ENSRROG00000040562)	DNAJB1 (ENSRROG00000035637)	GIPC1 (ENSRROG00000031568)	PTGER1 (ENSRROG00000035503)	PKN1 (ENSRROG00000014720)
Black snub-nosed monkey	MODERN SPECIES	2467												AKAP8L (ENSRBIG00000033532) #19	AKAP8 (ENSRBIG00000030066) ##19	BRD4 (ENSRBIG00000036966) #20	EPHX3 (ENSRBIG00000043527) #21	NOTCH3 (ENSRBIG00000043663) #22	ILVBL (ENSRBIG00000031076) #23	SYDE1 (ENSRBIG00000003282) #24	CASP14 (ENSRBIG00000036837) #26	CCDC105 (ENSRBIG00000042077) #27	SLC1A6 (ENSRBIG00000035412) #28	ADGRE2 (ENSRBIG00000042545) #33
Hominoidea	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.a	ENSGT01100000263561.C.d.a.b.a	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a.b.b	ENSGT01100000263561.C.d.b.a	ENSGT00940000154646.C.m	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.i.a.a.a ##31	ENSGT00950000183216.d #30	ENSGT00940000153523.i.a.b ##31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759
Hominidae	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.b.b	ENSGT01100000263561.C.d.b.a	ENSGT00940000154646.C.m	ENSGT00940000163718.a.a	ENSGT00940000154646.C.n.a	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.i.a.a.a.a.a ##31	ENSGT00950000183216.d #30	ENSGT00940000153523.i.a.b ##31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.b.a	ENSGT01060000248581.A.b.i #10	ENSGT01100000263561.C.d.a.b.b	ENSGT00940000163718.a.a	ENSGT00940000154646.C.n.a	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.i.a.a.a.a.a ##31	ENSGT00940000153523.i.a.a.b #31	ENSGT00940000153523.i.a.a.a.b ##31	ENSGT00940000153523.i.a.b ##31	ENSGT00940000153523.j ##31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37
Homo/Pan group	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.b.a	ENSGT01060000248581.A.b.i #10	ENSGT01100000263561.C.d.a.b.b	ENSGT00940000163718.a.a	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.i.a.a.a.a.a ##31	ENSGT00940000153523.i.a.a.b #31	ENSGT00940000153523.i.a.a.a.b ##31	ENSGT00940000153523.i.a.b ##31	ENSGT00940000153523.j ##31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37
Pan	ANCESTRAL SPECIES	14	ENSGT00940000163718.a.b	ENSGT01060000248581.A.b.i #10	ENSGT00940000163718.a.a	ENSGT00940000163407 #12	ENSGT00390000009210.j	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00900000143687	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.i.a.a.a.a.a ##31	ENSGT00940000153523.i.a.a.b #31	ENSGT00940000153523.i.a.a.a.b ##31	ENSGT00940000153523.i.a.b ##31	ENSGT00940000153523.j ##31	ENSGT00940000162597 #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153
Bonobo	MODERN SPECIES	10	ENSPPAG00000043725	OR10H3 (ENSPPAG00000002838) #10	CYP4F12 (ENSPPAG00000028411)	CYP4F3 (ENSPPAG00000037690) #12	ENSPPAG00000035382	CYP4F8 (ENSPPAG00000028268) #14	CYP4F22 (ENSPPAG00000040206) #15	PGLYRP2 (ENSPPAG00000034272) #16	RASAL3 (ENSPPAG00000041913) #17	ENSPPAG00000041420 #18	ENSPPAG00000024543	AKAP8L (ENSPPAG00000029573) #19	AKAP8 (ENSPPAG00000035505) ##19	BRD4 (ENSPPAG00000027477) #20	ENSPPAG00000027334 #21	NOTCH3 (ENSPPAG00000016297) #22	ILVBL (ENSPPAG00000031386) #23	SYDE1 (ENSPPAG00000028879) #24	CASP14 (ENSPPAG00000030191) #26	CCDC105 (ENSPPAG00000019113) #27	SLC1A6 (ENSPPAG00000042819) #28	OR7C2 (ENSPPAG00000016589) #32	OR7A17 (ENSPPAG00000019424) ##31	ENSPPAG00000012540 #31	ENSPPAG00000031313 ##31	OR7A10 (ENSPPAG00000008015) ##31	OR7A5 (ENSPPAG00000009243) ##31	OR7C1 (ENSPPAG00000023546) #32	ADGRE2 (ENSPPAG00000044011) #33	ZNF333 (ENSPPAG00000028875) #34	ADGRE3 (ENSPPAG00000033302) #37
Chimpanzee	MODERN SPECIES	10	ENSPTRG00000042532	OR10H3 (ENSPTRG00000044446) #10	CYP4F12 (ENSPTRG00000010629)	CYP4F3 (ENSPTRG00000010628) #12	ENSPTRG00000022977	CYP4F8 (ENSPTRG00000010627) #14	ENSPTRG00000051034	CYP4F22 (ENSPTRG00000010625) #15	PGLYRP2 (ENSPTRG00000010624) #16	RASAL3 (ENSPTRG00000033776) #17	ENSPTRG00000010622 #18	AKAP8L (ENSPTRG00000010621) #19	AKAP8 (ENSPTRG00000010620) ##19	BRD4 (ENSPTRG00000010619) #20	EPHX3 (ENSPTRG00000010618) #21	NOTCH3 (ENSPTRG00000010617) #22	ILVBL (ENSPTRG00000010614) #23	SYDE1 (ENSPTRG00000010613) #24	CASP14 (ENSPTRG00000039410) #26	CCDC105 (ENSPTRG00000010610) #27	SLC1A6 (ENSPTRG00000010609) #28	OR7C2 (ENSPTRG00000046680) #32	ENSPTRG00000010605 #31	ENSPTRG00000049200 ##31	OR7A10 (ENSPTRG00000010604) ##31	OR7A5 (ENSPTRG00000045068) ##31	OR7C1 (ENSPTRG00000048237) #32	ADGRE2 (ENSPTRG00000010601) #33	ZNF333 (ENSPTRG00000010599) #34	ADGRE3 (ENSPTRG00000010598) #37	CLEC17A (ENSPTRG00000010597)
Human	MODERN SPECIES	10	OR10H1 (ENSG00000186723)	OR10H5 (ENSG00000172519)	OR10H3 (ENSG00000171936) #10	OR10H2 (ENSG00000171942)	CYP4F12 (ENSG00000186204)	CYP4F3 (ENSG00000186529) #12	CYP4F8 (ENSG00000186526) #14	CYP4F22 (ENSG00000171954) #15	PGLYRP2 (ENSG00000161031) #16	RASAL3 (ENSG00000105122) #17	WIZ (ENSG00000011451) #18	AKAP8L (ENSG00000011243) #19	AKAP8 (ENSG00000105127) ##19	BRD4 (ENSG00000141867) #20	EPHX3 (ENSG00000105131) #21	NOTCH3 (ENSG00000074181) #22	ILVBL (ENSG00000105135) #23	SYDE1 (ENSG00000105137) #24	OR1I1 (ENSG00000094661) #25	CASP14 (ENSG00000105141) #26	CCDC105 (ENSG00000160994) #27	SLC1A6 (ENSG00000105143) #28	OR7C2 (ENSG00000127529) #32	OR7A17 (ENSG00000185385) ##31	OR7A10 (ENSG00000127515) ##31	OR7A5 (ENSG00000188269) ##31	OR7C1 (ENSG00000127530) #32	ADGRE2 (ENSG00000127507) #33	ZNF333 (ENSG00000160961) #34	ADGRE3 (ENSG00000131355) #37	CLEC17A (ENSG00000187912)
Gorilla	MODERN SPECIES	10	CYP4F11 (ENSGGOG00000003211) #11	ENSGGOG00000041121	CYP4F2 (ENSGGOG00000041863)	OR10H1 (ENSGGOG00000015718)	ENSGGOG00000013325	ENSGGOG00000003217	ENSGGOG00000013315	CYP4F22 (ENSGGOG00000010994) #15	PGLYRP2 (ENSGGOG00000000564) #16	RASAL3 (ENSGGOG00000000560) #17	ENSGGOG00000013470 #18	AKAP8L (ENSGGOG00000013441) #19	AKAP8 (ENSGGOG00000013427) ##19	BRD4 (ENSGGOG00000010410) #20	EPHX3 (ENSGGOG00000010769) #21	NOTCH3 (ENSGGOG00000002258) #22	ILVBL (ENSGGOG00000010556) #23	SYDE1 (ENSGGOG00000010548) #24	CASP14 (ENSGGOG00000000431) #26	CCDC105 (ENSGGOG00000006376) #27	SLC1A6 (ENSGGOG00000013450) #28	OR7C2 (ENSGGOG00000042035) #32	OR7A17 (ENSGGOG00000042940) ##31	ENSGGOG00000044137 #31	ENSGGOG00000015948 ##31	OR7A10 (ENSGGOG00000015049) ##31	OR7A5 (ENSGGOG00000009845) ##31	OR7C1 (ENSGGOG00000042495) #32	ADGRE2 (ENSGGOG00000013156) #33	ZNF333 (ENSGGOG00000006355) #34	ADGRE3 (ENSGGOG00000027289) #37
Orangutan	MODERN SPECIES	10	CYP4F2 (ENSPPYG00000031401)	OR10H2 (ENSPPYG00000009676)	ENSPPYG00000039864	ENSPPYG00000040062 #11	CYP4F12 (ENSPPYG00000009674)	ENSPPYG00000035762	CYP4F8 (ENSPPYG00000009678) #14	CYP4F22 (ENSPPYG00000039746) #15	PGLYRP2 (ENSPPYG00000009673) #16	RASAL3 (ENSPPYG00000029373) #17	WIZ (ENSPPYG00000009672) #18	AKAP8L (ENSPPYG00000029684) #19	AKAP8 (ENSPPYG00000009671) ##19	BRD4 (ENSPPYG00000009670) #20	EPHX3 (ENSPPYG00000009669) #21	NOTCH3 (ENSPPYG00000009668) #22	ILVBL (ENSPPYG00000009667) #23	SYDE1 (ENSPPYG00000009666) #24	OR1I1 (ENSPPYG00000009665) #25	CASP14 (ENSPPYG00000009664) #26	CCDC105 (ENSPPYG00000009663) #27	SLC1A6 (ENSPPYG00000009662) #28	ENSPPYG00000036745 ##31	ENSPPYG00000039880 #30	ENSPPYG00000039427 #30	OR7A17 (ENSPPYG00000037032) ##31	ENSPPYG00000035025 #30	OR7A10 (ENSPPYG00000009656) ##31	ADGRE2 (ENSPPYG00000009654) #33	ZNF333 (ENSPPYG00000009652) #34	ADGRE3 (ENSPPYG00000009651) #37
Gibbon	MODERN SPECIES		ENSNLEG00000005413 #9	CYP4F11 (ENSNLEG00000005353) #11	CYP4F2 (ENSNLEG00000030654)	OR10H1 (ENSNLEG00000019212)	OR10H5 (ENSNLEG00000019211)	CYP4F12 (ENSNLEG00000031570)	CYP4F3 (ENSNLEG00000026936)	CYP4F8 (ENSNLEG00000005329) #14	CYP4F22 (ENSNLEG00000005325) #15	ENSNLEG00000005323 #17	ENSNLEG00000005312 #18	AKAP8L (ENSNLEG00000005271) #19	AKAP8 (ENSNLEG00000005263) ##19	BRD4 (ENSNLEG00000005233) #20	EPHX3 (ENSNLEG00000005217) #21	NOTCH3 (ENSNLEG00000031319) #22	ILVBL (ENSNLEG00000005203) #23	SYDE1 (ENSNLEG00000005186) #24	ENSNLEG00000005163 #25	CCDC105 (ENSNLEG00000005171) #27	ENSNLEG00000005164 #28	ENSNLEG00000033650 ##31	ENSNLEG00000029491 ##31	ZNF333 (ENSNLEG00000005137) #34	ADGRE3 (ENSNLEG00000005125) #37	ENSNLEG00000032413	ENSNLEG00000013719	TECR (ENSNLEG00000013546)	ENSNLEG00000030825	ENSNLEG00000013539	ENSNLEG00000013522
Platyrrhini	ANCESTRAL SPECIES	16							ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523 #31	ENSGT00950000183216.d #30	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312
Cebidae	ANCESTRAL SPECIES	53							ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24
Cebidae_a	ANCESTRAL SPECIES	134							ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24
Capuchin	MODERN SPECIES	720								CYP4F22 (ENSCCAG00000019711) #15	PGLYRP2 (ENSCCAG00000021927) #16	RASAL3 (ENSCCAG00000029864) #17	WIZ (ENSCCAG00000026732) #18	AKAP8L (ENSCCAG00000036248) #19	AKAP8 (ENSCCAG00000037134) ##19	BRD4 (ENSCCAG00000028099) #20	EPHX3 (ENSCCAG00000027530) #21	NOTCH3 (ENSCCAG00000037400) #22	ILVBL (ENSCCAG00000026617) #23	SYDE1 (ENSCCAG00000026405) #24
Bolivian squirrel monkey	MODERN SPECIES	276							ENSSBOG00000030963 #14	CYP4F22 (ENSSBOG00000026724) #15	PGLYRP2 (ENSSBOG00000024600) #16	RASAL3 (ENSSBOG00000002508) #17	WIZ (ENSSBOG00000019267) #18	AKAP8L (ENSSBOG00000031029) #19	AKAP8 (ENSSBOG00000022494) ##19	BRD4 (ENSSBOG00000027916) #20	EPHX3 (ENSSBOG00000021961) #21	NOTCH3 (ENSSBOG00000024679) #22	ILVBL (ENSSBOG00000013158) #23	SYDE1 (ENSSBOG00000012923) #24
Marmoset	MODERN SPECIES	14	ADGRE3 (ENSCJAG00000004557) #37	ZNF333 (ENSCJAG00000004543) #34	ENSCJAG00000004537 #30	ENSCJAG00000054592 #31	OR7C2 (ENSCJAG00000046592) #32	SLC1A6 (ENSCJAG00000004498) #28	CCDC105 (ENSCJAG00000004489) #27	CASP14 (ENSCJAG00000004476) #26	CYP4F22 (ENSCJAG00000041905) #15	WIZ (ENSCJAG00000002265) #18	RASAL3 (ENSCJAG00000002291) #17	AKAP8L (ENSCJAG00000002227) #19	AKAP8 (ENSCJAG00000002212) ##19	BRD4 (ENSCJAG00000002178) #20	EPHX3 (ENSCJAG00000002169) #21	NOTCH3 (ENSCJAG00000002121) #22	ILVBL (ENSCJAG00000002096) #23	SYDE1 (ENSCJAG00000002073) #24	ENSCJAG00000009484	ENSCJAG00000070632 #11	CYP4F12 (ENSCJAG00000075042)	ENSCJAG00000023176 #10	ENSCJAG00000039185	ENSCJAG00000023177	CYP4F2 (ENSCJAG00000042753)	ENSCJAG00000014135 #9	RAB8A (ENSCJAG00000039886) #8	HSH2D (ENSCJAG00000044690) #7	CIB3 (ENSCJAG00000014103)	FAM32A (ENSCJAG00000014097)	AP1M1 (ENSCJAG00000014070)
Mas night monkey	MODERN SPECIES	251							CYP4F23 (ENSANAG00000019335) #14	CYP4F22 (ENSANAG00000029776) #15	PGLYRP2 (ENSANAG00000019558) #16	RASAL3 (ENSANAG00000022383) #17	WIZ (ENSANAG00000027183) #18	AKAP8L (ENSANAG00000036794) #19	AKAP8 (ENSANAG00000036569) ##19	BRD4 (ENSANAG00000037505) #20	EPHX3 (ENSANAG00000026368) #21	NOTCH3 (ENSANAG00000021084) #22	ILVBL (ENSANAG00000031737) #23	SYDE1 (ENSANAG00000022113) #24	ENSANAG00000037637	CASP14 (ENSANAG00000027858) #26	CCDC105 (ENSANAG00000030541) #27	SLC1A6 (ENSANAG00000026318) #28	ZNF333 (ENSANAG00000027468) #34	ADGRE3 (ENSANAG00000018923) #37	CLEC17A (ENSANAG00000032640)	NDUFB7 (ENSANAG00000037513)	TECR (ENSANAG00000030591)	DNAJB1 (ENSANAG00000031367)	GIPC1 (ENSANAG00000032969)	PTGER1 (ENSANAG00000034925)	PKN1 (ENSANAG00000030511)
Tarsier	MODERN SPECIES	1152									PGLYRP2 (ENSTSYG00000033510) #16	RASAL3 (ENSTSYG00000029192) #17	ENSTSYG00000025484 #18	AKAP8L (ENSTSYG00000030638) #19	AKAP8 (ENSTSYG00000009048) ##19	BRD4 (ENSTSYG00000034700) #20	EPHX3 (ENSTSYG00000032321) #21	NOTCH3 (ENSTSYG00000012664) #22
Strepsirrhini	ANCESTRAL SPECIES	33	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT01090000260018.B.a.a	ENSGT00940000163407 #12	ENSGT00940000155021.n.g.a #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.h.a.a #31	ENSGT00950000183216.d #30
Lemuriformes	ANCESTRAL SPECIES	45	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT01090000260018.B.a.a	ENSGT01100000263561.C.d.a	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00800000125293	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.h.a.a #31
Lemuriformes_a	ANCESTRAL SPECIES	184				ENSGT00940000154646.C.o.a	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C.p	ENSGT00940000155021.n.g.b #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00800000125293	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.h.a.a.d #31
Coquerels sifaka	MODERN SPECIES	905					ENSPCOG00000016765	CYP4F153 (ENSPCOG00000019200)	CYP4F152 (ENSPCOG00000018994) #14	CYP4F22 (ENSPCOG00000016790) #15	PGLYRP2 (ENSPCOG00000018680) #16	RASAL3 (ENSPCOG00000027582) #17	ENSPCOG00000014237 #18	AKAP8L (ENSPCOG00000015753) #19	AKAP8 (ENSPCOG00000016236) ##19	BRD4 (ENSPCOG00000014633) #20	EPHX3 (ENSPCOG00000027978) #21	NOTCH3 (ENSPCOG00000013208) #22
Greater bamboo lemur	MODERN SPECIES	319								CYP4F22 (ENSPSMG00000009052) #15	PGLYRP2 (ENSPSMG00000009065) #16	RASAL3 (ENSPSMG00000009096) #17	WIZ (ENSPSMG00000009151) #18	AKAP8L (ENSPSMG00000009226) #19	AKAP8 (ENSPSMG00000009285) ##19	ENSPSMG00000009336	EPHX3 (ENSPSMG00000009354) #21	NOTCH3 (ENSPSMG00000009419) #22	ENSPSMG00000009436	ILVBL (ENSPSMG00000009515) #23	SYDE1 (ENSPSMG00000009583) #24	ENSPSMG00000009621	OR1I1 (ENSPSMG00000009643) #25	CASP14 (ENSPSMG00000009650) #26	ENSPSMG00000009655	C12orf40 (ENSPSMG00000009671)	ABCD2 (ENSPSMG00000009693)	KIF21A (ENSPSMG00000009951)	CPNE8 (ENSPSMG00000010217)	ENSPSMG00000010227	EIF4B (ENSPSMG00000010432)
Mouse lemur	MODERN SPECIES	20	RAB8A (ENSMICG00000035390) #8	TPM4 (ENSMICG00000036790) #9	ENSMICG00000033202 #14	CYP4F168 (ENSMICG00000027403) #12	ENSMICG00000007563	ENSMICG00000017526 #12	CYP4F152 (ENSMICG00000030878)	CYP4F22 (ENSMICG00000026659) #15	PGLYRP2 (ENSMICG00000012782) #16	RASAL3 (ENSMICG00000032437) #17	ENSMICG00000012764 #18	AKAP8L (ENSMICG00000027945) #19	AKAP8 (ENSMICG00000012702) ##19	ENSMICG00000014267	EPHX3 (ENSMICG00000014256) #21	NOTCH3 (ENSMICG00000014208) #22	ILVBL (ENSMICG00000005896) #23	SYDE1 (ENSMICG00000047920) #24	CASP14 (ENSMICG00000044736) #26	CCDC105 (ENSMICG00000032296) #27	SLC1A6 (ENSMICG00000037299) #28	MYO9B (ENSMICG00000013974)	USE1 (ENSMICG00000014011)	OCEL1 (ENSMICG00000045602)	NR2F6 (ENSMICG00000032394)	USHBP1 (ENSMICG00000008197)	BABAM1 (ENSMICG00000034679)	ANKLE1 (ENSMICG00000032095)	ABHD8 (ENSMICG00000031476)	MRPL34 (ENSMICG00000043112)	DDA1 (ENSMICG00000001763)
Bushbaby	MODERN SPECIES	220	CYP4F115 (ENSOGAG00000011748) #14	CYP4F113 (ENSOGAG00000007410)	ENSOGAG00000028565 #10	CYP4F112 (ENSOGAG00000031204)	CYP4F111 (ENSOGAG00000002017)	CYP4F3 (ENSOGAG00000032860) #14	CYP4F22 (ENSOGAG00000030936) #15	ENSOGAG00000024112	PGLYRP2 (ENSOGAG00000026199) #16	RASAL3 (ENSOGAG00000033656) #17	WIZ (ENSOGAG00000010952) #18	AKAP8L (ENSOGAG00000010943) #19	AKAP8 (ENSOGAG00000029564) ##19	ENSOGAG00000000840	EPHX3 (ENSOGAG00000006687) #21	NOTCH3 (ENSOGAG00000006680) #22	ENSOGAG00000024942	ILVBL (ENSOGAG00000014020) #23	SYDE1 (ENSOGAG00000014015) #24	OR1I1 (ENSOGAG00000003203) #25	CASP14 (ENSOGAG00000024750) #26	CCDC105 (ENSOGAG00000011860) #27	SLC1A6 (ENSOGAG00000029166) #28	ENSOGAG00000033292 #31	OR7C2 (ENSOGAG00000031212) #32	ENSOGAG00000025389 #31	ENSOGAG00000028478 #31	ENSOGAG00000026639 #30
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a	ENSGT01100000263561.C.d.b.a	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.c.b.a ##30	ENSGT00940000164720	ENSGT00940000161354	ENSGT00940000162163	ENSGT00950000183069.b	ENSGT00940000164424
Glires	ANCESTRAL SPECIES	21	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a	ENSGT01100000263561.C.d.b.a	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.j.b #30	ENSGT00940000153523.b #31	ENSGT00950000183216.d.j.a #30	ENSGT00940000153523.a #31	ENSGT00950000183216.d.k #30	ENSGT00940000162597 #33
Rodentia	ANCESTRAL SPECIES	17	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a	ENSGT01100000263561.C.d.b.a	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.j.b #30	ENSGT00940000153523.b #31	ENSGT00950000183216.d.j.a.a.a #30	ENSGT00940000153523.a #31	ENSGT00950000183216.d.j.a.a.b.a.b #30	ENSGT00950000183216.d.j.a.a.b.a.a #30
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000163407 #12	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.b #31	ENSGT00950000183216.d.j.a.a.a.a.a.a.b #30	ENSGT00940000153523.a.b #31	ENSGT00950000183216.d.j.b #30	ENSGT00940000163952	ENSGT00950000183216.d.j.a.a.b.a.b #30	ENSGT00940000153523.a.a #31
Sciuridae	ANCESTRAL SPECIES	20	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT01090000260018.B.a.a	ENSGT01100000263561.C.d.a.i	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.a #32	ENSGT00940000153523.b #31	ENSGT00950000183216.d.j.a.a.a.a.a.a.b #30	ENSGT00940000153523.a.b #31	ENSGT00950000183216.d.j.b #30	ENSGT00950000183216.d.j.a.a.b.a.b #30	ENSGT00940000153523.a.a #31	ENSGT00950000183216.d.j.a.a.a.a.b.a #30
Marmotini	ANCESTRAL SPECIES	12	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT01030000234542.b.b.b ##9	ENSGT00940000162704	ENSGT01100000263561.C.d.a.j	ENSGT00940000163407 #12	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.a.d #32	ENSGT00940000153523.b.c.a #31	ENSGT00940000163161.h #34	ENSGT00940000162597.r #33	ENSGT00950000183216.d.j.a.a.b.a.a #30
Marmotini_b	ANCESTRAL SPECIES	12	ENSGT01030000234542.b.b.b ##9	ENSGT00940000162704	ENSGT00950000182755.b.a.a.b.a.b.a.b.b.a.b.c	ENSGT00950000182755.b.a.a.b.a.b.a.a.b	ENSGT01100000263561.C.d.a.i	ENSGT01100000263561.C.d.a.j	ENSGT00940000163407 #12	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.a.d #32	ENSGT00950000183216.d.j.b #30
Arctic ground squirrel	MODERN SPECIES	73	ENSUPAG00010021742	ENSUPAG00010021745	ENSUPAG00010021748	ENSUPAG00010021764	ENSUPAG00010000031	ENSUPAG00010000051	CYP4F3 (ENSUPAG00010000077) #12	CYP4F22 (ENSUPAG00010000617) #15	PGLYRP2 (ENSUPAG00010000648) #16	RASAL3 (ENSUPAG00010000678) #17	WIZ (ENSUPAG00010000750) #18	AKAP8L (ENSUPAG00010000867) #19	AKAP8 (ENSUPAG00010000900) ##19	BRD4 (ENSUPAG00010000930) #20	EPHX3 (ENSUPAG00010001059) #21	NOTCH3 (ENSUPAG00010001075) #22	ILVBL (ENSUPAG00010001107) #23	SYDE1 (ENSUPAG00010001206) #24	OR1I1 (ENSUPAG00010001223) #25	CASP14 (ENSUPAG00010001230) #26	CCDC105 (ENSUPAG00010001244) #27	SLC1A6 (ENSUPAG00010001271) #28
Squirrel	MODERN SPECIES	196	TPM4 (ENSSTOG00000024252) #9	ENSSTOG00000026892	ENSSTOG00000033644	ENSSTOG00000029948	ENSSTOG00000016037	ENSSTOG00000033817	CYP4F8 (ENSSTOG00000016028) #14	CYP4F22 (ENSSTOG00000016025) #15	PGLYRP2 (ENSSTOG00000021401) #16	ENSSTOG00000024022 #17	ENSSTOG00000006775 #18	AKAP8L (ENSSTOG00000022788) #19	AKAP8 (ENSSTOG00000006762) ##19	BRD4 (ENSSTOG00000003443) #20	EPHX3 (ENSSTOG00000003433) #21	NOTCH3 (ENSSTOG00000003378) #22	ENSSTOG00000019789	ILVBL (ENSSTOG00000012069) #23	SYDE1 (ENSSTOG00000022732) #24	OR1I1 (ENSSTOG00000012066) #25	CASP14 (ENSSTOG00000030614) #26	CCDC105 (ENSSTOG00000023699) #27	SLC1A6 (ENSSTOG00000020911) #28	ENSSTOG00000025841 #32	ENSSTOG00000020401 #31	ENSSTOG00000020413 #31
Alpin marmot	MODERN SPECIES	24	ENSMMMG00000022612	ENSMMMG00000022610	ENSMMMG00000022564	ENSMMMG00000022557	CYP4F2 (ENSMMMG00000022533)	CYP4F8 (ENSMMMG00000022511) #14	CYP4F22 (ENSMMMG00000022504) #15	PGLYRP2 (ENSMMMG00000022496) #16	RASAL3 (ENSMMMG00000022474) #17	ENSMMMG00000022459 #18	AKAP8L (ENSMMMG00000022438) #19	AKAP8 (ENSMMMG00000022416) ##19	ENSMMMG00000022411	ENSMMMG00000022407	EPHX3 (ENSMMMG00000022401) #21	NOTCH3 (ENSMMMG00000022356) #22	ENSMMMG00000022351	ILVBL (ENSMMMG00000022300) #23	SYDE1 (ENSMMMG00000022294) #24	OR1I1 (ENSMMMG00000022293) #25	CASP14 (ENSMMMG00000022289) #26	CCDC105 (ENSMMMG00000022286) #27	SLC1A6 (ENSMMMG00000022279) #28	ENSMMMG00000022278 #30	ENSMMMG00000022277 #30	ENSMMMG00000022259 #30	ENSMMMG00000022258 #33	ENSMMMG00000022253 #33	ENSMMMG00000022214 #33	ENSMMMG00000022213 #34	ENSMMMG00000022196 #33
Eurasian red squirrel	MODERN SPECIES	7	ENSSVLG00005016928	ENSSVLG00005016914 #10	CYP4F3 (ENSSVLG00005016688) #12	ENSSVLG00005016604 #14	ENSSVLG00005016546	ENSSVLG00005016389 #14	CYP4F22 (ENSSVLG00005016293) #15	PGLYRP2 (ENSSVLG00005016234) #16	RASAL3 (ENSSVLG00005016079) #17	WIZ (ENSSVLG00005015495) #18	AKAP8L (ENSSVLG00005015355) #19	AKAP8 (ENSSVLG00005015317) ##19	BRD4 (ENSSVLG00005025918) #20	EPHX3 (ENSSVLG00005025914) #21	ENSSVLG00005025912	NOTCH3 (ENSSVLG00005025909) #22	ILVBL (ENSSVLG00005025905) #23	SYDE1 (ENSSVLG00005025903) #24	OR1I1 (ENSSVLG00005025901) #25	ENSSVLG00005025898	CASP14 (ENSSVLG00005025896) #26	CCDC105 (ENSSVLG00005025891) #27	SLC1A6 (ENSSVLG00005025880) #28	ENSSVLG00005025872 #32	ENSSVLG00005025870	ENSSVLG00005025869 #32	ENSSVLG00005025867 #30	ENSSVLG00005025866	ENSSVLG00005025864 #31	ENSSVLG00005025860 #32	ENSSVLG00005025854 ##30
Hystricomorpha	ANCESTRAL SPECIES	55					ENSGT00940000154646.C	ENSGT00940000155021.m.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00950000183216.d.j.b #30	ENSGT00940000163952	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a
Naked mole-rat female	MODERN SPECIES	21			ENSHGLG00000038601	ENSHGLG00000006444	CYP4F3 (ENSHGLG00000005064)	ENSHGLG00000010876 ##14	CYP4F22 (ENSHGLG00000007762) #15	PGLYRP2 (ENSHGLG00000006376) #16	RASAL3 (ENSHGLG00000014513) #17	ENSHGLG00000015009 #18	AKAP8L (ENSHGLG00000019540) #19	AKAP8 (ENSHGLG00000006879) ##19	BRD4 (ENSHGLG00000004103) #20	EPHX3 (ENSHGLG00000050720) #21	ENSHGLG00000004261	NOTCH3 (ENSHGLG00000006380) #22	ENSHGLG00000046535	ENSHGLG00000003524	ILVBL (ENSHGLG00000006099) #23	SYDE1 (ENSHGLG00000004301) #24	OR1I1 (ENSHGLG00000020056) #25	CASP14 (ENSHGLG00000003676) #26	ENSHGLG00000011020	CCDC105 (ENSHGLG00000009025) #27	SLC1A6 (ENSHGLG00000044141) #28	ENSHGLG00000020442 #32	ENSHGLG00000005565	ENSHGLG00000043939 #30	ENSHGLG00000020237	ENSHGLG00000034158 #30	ENSHGLG00000037347 #30
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT00940000154646.C	ENSGT00940000155021.m.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00950000183216.d.j.b #30	ENSGT00940000163952	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT00940000154646.C	ENSGT00940000155021.m.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.b #31
Long-tailed chinchilla	MODERN SPECIES	202	PLPP2 (ENSCLAG00000010976)	ENSCLAG00000018029	ENSCLAG00000017709	ENSCLAG00000010066	ENSCLAG00000010747 ##14	CYP4F2 (ENSCLAG00000009909)	ENSCLAG00000008878	CYP4F22 (ENSCLAG00000011778) #15	PGLYRP2 (ENSCLAG00000008866) #16	RASAL3 (ENSCLAG00000011595) #17	ENSCLAG00000013723 #18	AKAP8L (ENSCLAG00000008083) #19	AKAP8 (ENSCLAG00000008154) ##19	BRD4 (ENSCLAG00000008703) #20	EPHX3 (ENSCLAG00000007405) #21	NOTCH3 (ENSCLAG00000010364) #22	ILVBL (ENSCLAG00000009795) #23	SYDE1 (ENSCLAG00000012531) #24	OR1I1 (ENSCLAG00000018035) #25	CASP14 (ENSCLAG00000016922) #26	CCDC105 (ENSCLAG00000016660) #27	SLC1A6 (ENSCLAG00000013046) #28	ENSCLAG00000017888 #31
Degu	MODERN SPECIES	91	ENSODEG00000010516 #12	ENSODEG00000012644 #12	ENSODEG00000011468 #12	ENSODEG00000019982	CYP4F8 (ENSODEG00000012418) ##14	CYP4F22 (ENSODEG00000011011) #15	ENSODEG00000019784	PGLYRP2 (ENSODEG00000010857) #16	ENSODEG00000011358 #17	WIZ (ENSODEG00000011172) #18	AKAP8L (ENSODEG00000010840) #19	AKAP8 (ENSODEG00000011314) ##19	ENSODEG00000010978	BRD4 (ENSODEG00000011937) #20	EPHX3 (ENSODEG00000010791) #21	NOTCH3 (ENSODEG00000011730) #22	ILVBL (ENSODEG00000011511) #23	SYDE1 (ENSODEG00000010751) #24	CASP14 (ENSODEG00000010016) #26	CCDC105 (ENSODEG00000011650) #27	SLC1A6 (ENSODEG00000011064) #28	ENSODEG00000010232	COL1A2 (ENSODEG00000010146)	CASD1 (ENSODEG00000010520)	ENSODEG00000009551	PEG10 (ENSODEG00000009969)	PPP1R9A (ENSODEG00000010739)	PON1 (ENSODEG00000009868)	PON3 (ENSODEG00000011235)	PON2 (ENSODEG00000010755)	ASB4 (ENSODEG00000010657)
Guinea pig	MODERN SPECIES	168	MIER2 (ENSCPOG00000025356)	PLPP2 (ENSCPOG00000026420)	ENSCPOG00000033745	ENSCPOG00000038272	ENSCPOG00000022613 #12	ENSCPOG00000033269 #12	CYP4F8 (ENSCPOG00000010488) ##14	CYP4F22 (ENSCPOG00000039309) #15	PGLYRP2 (ENSCPOG00000024218) #16	RASAL3 (ENSCPOG00000003039) #17	ENSCPOG00000009735 #18	AKAP8L (ENSCPOG00000036348) #19	AKAP8 (ENSCPOG00000009712) ##19	BRD4 (ENSCPOG00000001410) #20	EPHX3 (ENSCPOG00000006950) #21	NOTCH3 (ENSCPOG00000022014) #22	ENSCPOG00000021238	ILVBL (ENSCPOG00000005321) #23	SYDE1 (ENSCPOG00000027188) #24	OR1I1 (ENSCPOG00000024305) #25	CASP14 (ENSCPOG00000025545) #26	CCDC105 (ENSCPOG00000023751) #27	SLC1A6 (ENSCPOG00000002093) #28	ENSCPOG00000035987 #30	ENSCPOG00000039012 #30	ENSCPOG00000032536 #30	ENSCPOG00000007338	ENSCPOG00000030751 #30	ENSCPOG00000015657	ENSCPOG00000038355 #30	ENSCPOG00000031371
Rodentia_B	ANCESTRAL SPECIES	53			ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.m.a ##14	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.j.b #30	ENSGT00940000153523.b #31
Myomorpha	ANCESTRAL SPECIES	64			ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C	ENSGT00940000155021.m.a ##14	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.j.b #30	ENSGT00940000153523.b #31
Muroidea	ANCESTRAL SPECIES	79			ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C.s	ENSGT00940000155021.n #14	ENSGT00940000155021.m.a.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.j.b #30	ENSGT00940000153523.b #31
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.a.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT00940000154646.C.s.b	ENSGT00940000155021.n #14	ENSGT00940000155021.m.a.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.j.b.b #30	ENSGT00940000153523.b.b #31	ENSGT00950000183216.d.j.b.a #30	ENSGT00940000153523.b.a #31	ENSGT00940000163952.a	ENSGT00940000163952.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT00940000154646.C.s.b	ENSGT00940000155021.m.b.a ##14	ENSGT00940000155021.m.b.b ##14	ENSGT00940000155021.m.a.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.b.b #31	ENSGT00950000183216.d.j.b.a #30	ENSGT00940000153523.b.a #31	ENSGT00940000163952.a	ENSGT00940000163952.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b	ENSGT00950000183069.b.b.a.a.e.b.b
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT01100000263561.C.d.b.b	ENSGT00940000154646.C.s.b	ENSGT00940000155021.m.b.a ##14	ENSGT00940000155021.m.b.b ##14	ENSGT00940000155021.m.a.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000153523.b.b #31	ENSGT00950000183216.d.j.b.a #30	ENSGT00940000153523.b.a #31	ENSGT00940000163952.a	ENSGT00940000163952.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b	ENSGT00950000183069.b.b.a.a.e.b.b	ENSGT00940000155885
Chinese hamster chok1gshd	MODERN SPECIES	2	Zfp871 (ENSCGRG00001018414)	Cyp4f15 (ENSCGRG00001012799)	ENSCGRG00001009134	Cyp4f40 (ENSCGRG00001020643)	ENSCGRG00001018621 ##14	ENSCGRG00001020897 ##14	Cyp4f17 (ENSCGRG00001021347) ##14	Cyp4f39 (ENSCGRG00001023660) #15	Pglyrp2 (ENSCGRG00001000486) #16	Rasal3 (ENSCGRG00001023853) #17	ENSCGRG00001017844 #18	ENSCGRG00001019147 #19	Akap8 (ENSCGRG00001016207) ##19	Brd4 (ENSCGRG00001022342) #20	Ephx3 (ENSCGRG00001017044) #21	Notch3 (ENSCGRG00001020179) #22	ENSCGRG00001013161	ENSCGRG00001024090	ENSCGRG00001001082	Ilvbl (ENSCGRG00001003112) #23	Syde1 (ENSCGRG00001005250) #24	Or1i2 (ENSCGRG00001010185) #25	Casp14 (ENSCGRG00001015488) #26	Ccdc105 (ENSCGRG00001014217) #27	Slc1a6 (ENSCGRG00001015926) #28	Or7c70 (ENSCGRG00001007644) #32	ENSCGRG00001000829	ENSCGRG00001010046 #31	Or7a37 (ENSCGRG00001024013) #30	Or7a36 (ENSCGRG00001006807) #31	ENSCGRG00001009644
Golden Hamster	MODERN SPECIES	764	Zfp799 (ENSMAUG00000003880)	Zfp811 (ENSMAUG00000009717)	Zfp871 (ENSMAUG00000019949)	Cyp4f40 (ENSMAUG00000002140)	ENSMAUG00000009024 ##14	ENSMAUG00000021406 ##14	ENSMAUG00000002860	Cyp4f39 (ENSMAUG00000021470) #15	Pglyrp2 (ENSMAUG00000013267) #16	Rasal3 (ENSMAUG00000010568) #17	ENSMAUG00000020479	Akap8l (ENSMAUG00000021519) #19	Akap8 (ENSMAUG00000021975) ##19	Brd4 (ENSMAUG00000019036) #20	Ephx3 (ENSMAUG00000010068) #21	Notch3 (ENSMAUG00000021946) #22	Ilvbl (ENSMAUG00000015514) #23	Syde1 (ENSMAUG00000010021) #24	Casp14 (ENSMAUG00000015211) #26	Ccdc105 (ENSMAUG00000015800) #27	Slc1a6 (ENSMAUG00000010823) #28	Or7a37 (ENSMAUG00000018329) #30	ENSMAUG00000011922	2610008E11Rik (ENSMAUG00000007597)	ENSMAUG00000008319	ENSMAUG00000020592	ENSMAUG00000009575	ENSMAUG00000013541	Plpp2 (ENSMAUG00000009359)	ENSMAUG00000005384	ENSMAUG00000008189
Cricetidae_B	ANCESTRAL SPECIES	57	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT00940000154646.C.s.b	ENSGT00940000155021.m.b.a ##14	ENSGT00940000155021.m.b.b ##14	ENSGT00940000155021.m.a.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000153523.b.b #31	ENSGT00940000153523.b.a #31	ENSGT00940000163952.a	ENSGT00940000163952.b	ENSGT00940000153505.a.a.c.a.a.a.b.a.a.b	ENSGT00950000183069.b.b.a.a.e.b.b
Northern American deer mouse	MODERN SPECIES	14	Rps28 (ENSPEMG00000015848)	Ndufa7 (ENSPEMG00000016851)	Cd320 (ENSPEMG00000016121)	ENSPEMG00000025671	ENSPEMG00000024877	ENSPEMG00000004681	ENSPEMG00000020195	Pglyrp2 (ENSPEMG00000007236) #16	Rasal3 (ENSPEMG00000008310) #17	ENSPEMG00000014668 #18	Akap8l (ENSPEMG00000008156) #19	Akap8 (ENSPEMG00000016622) ##19	Brd4 (ENSPEMG00000015342) #20	Ephx3 (ENSPEMG00000001114) #21	ENSPEMG00000026978	Notch3 (ENSPEMG00000003368) #22	Or10b1 (ENSPEMG00000031391)	Ilvbl (ENSPEMG00000016636) #23	Syde1 (ENSPEMG00000017967) #24	Or1i2 (ENSPEMG00000002732) #25	Casp14 (ENSPEMG00000003806) #26	Ccdc105 (ENSPEMG00000008931) #27	ENSPEMG00000015450 #28	ENSPEMG00000009495 #31	Or7a36 (ENSPEMG00000011041) #31	ENSPEMG00000008828	ENSPEMG00000008518	2610008E11Rik (ENSPEMG00000029764)	ENSPEMG00000030002	ENSPEMG00000028855	ENSPEMG00000008525
Prairie vole	MODERN SPECIES	353	ENSMOCG00000000627	Zfp871 (ENSMOCG00000003294)	Cyp4f15 (ENSMOCG00000008767)	Cyp4f40 (ENSMOCG00000003798)	ENSMOCG00000005787 ##14	ENSMOCG00000016388 ##14	Cyp4f17 (ENSMOCG00000000767) ##14	Cyp4f39 (ENSMOCG00000008129) #15	Pglyrp2 (ENSMOCG00000012093) #16	Rasal3 (ENSMOCG00000000323) #17	Wiz (ENSMOCG00000004182) #18	Akap8l (ENSMOCG00000017098) #19	Akap8 (ENSMOCG00000001588) ##19	Brd4 (ENSMOCG00000019710) #20	Ephx3 (ENSMOCG00000016735) #21	Notch3 (ENSMOCG00000001344) #22	Ilvbl (ENSMOCG00000007265) #23	Syde1 (ENSMOCG00000010233) #24	Casp14 (ENSMOCG00000013844) #26	Ccdc105 (ENSMOCG00000013529) #27	Slc1a6 (ENSMOCG00000020405) #28	Or7a36 (ENSMOCG00000002619) #31	ENSMOCG00000008222	2610008E11Rik (ENSMOCG00000008949)	ENSMOCG00000017805	ENSMOCG00000020687	ENSMOCG00000021154	ENSMOCG00000007015	ENSMOCG00000011467	ENSMOCG00000011429	ENSMOCG00000014683
Murinae	ANCESTRAL SPECIES	25	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.a.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT00940000154646.C.s.b	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.j.b.b #30	ENSGT00940000153523.b.b #31	ENSGT00950000183216.d.j.b.a #30	ENSGT00940000153523.b.a #31	ENSGT00940000163952.a.d	ENSGT00940000163952.a.c
Mus	ANCESTRAL SPECIES	16	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.a.a	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.a.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT00940000154646.C.s.b	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00800000125293
Mus_A	ANCESTRAL SPECIES	10	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.a.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT00940000154646.C.s.b	ENSGT00940000155021.m.b.a.c.a ##14	ENSGT00940000155021.m.a.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00800000125293	ENSGT00390000011821.a	ENSGT00390000008490	ENSGT00940000154989.t	ENSGT00940000160159	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x	ENSGT00390000012196	ENSGT00390000012174	ENSGT00940000155587.a.b	ENSGT00940000159245	ENSGT00940000157240	ENSGT00940000160841	ENSGT00940000158589
Mus_B	ANCESTRAL SPECIES	9	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.a.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT00940000154646.C.s.b	ENSGT00940000155021.m.b.a.c.a ##14	ENSGT00940000155021.m.a.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00800000125293	ENSGT00390000011821.a	ENSGT00390000008490	ENSGT00940000154989.t	ENSGT00940000160159	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x	ENSGT00390000012196	ENSGT00390000012174	ENSGT00940000155587.a.b	ENSGT00940000159245	ENSGT00940000157240	ENSGT00940000160841	ENSGT00940000158589
Mouse	MODERN SPECIES	8	Zfp811 (ENSMUSG00000055202)	Zfp871 (ENSMUSG00000024298)	Cyp4f15 (ENSMUSG00000073424)	Cyp4f40 (ENSMUSG00000090700)	Cyp4f37 (ENSMUSG00000062464) ##14	Cyp4f16 (ENSMUSG00000048440) ##14	Cyp4f17 (ENSMUSG00000091586) ##14	Cyp4f39 (ENSMUSG00000061126) #15	Pglyrp2 (ENSMUSG00000079563) #16	Rasal3 (ENSMUSG00000052142) #17	Wiz (ENSMUSG00000024050) #18	Akap8l (ENSMUSG00000002625) #19	Akap8 (ENSMUSG00000024045) ##19	Brd4 (ENSMUSG00000024002) #20	Ephx3 (ENSMUSG00000037577) #21	Notch3 (ENSMUSG00000038146) #22	Rrp1b (ENSMUSG00000058392)	Hsf2bp (ENSMUSG00000002076)	Sik1 (ENSMUSG00000024042)	Cryaa (ENSMUSG00000024041)	U2af1 (ENSMUSG00000061613)	Cbs (ENSMUSG00000024039)	Pknox1 (ENSMUSG00000006705)	Ndufv3 (ENSMUSG00000024038)	Wdr4 (ENSMUSG00000024037)	Pde9a (ENSMUSG00000041119)	Slc37a1 (ENSMUSG00000024036)	Rsph1 (ENSMUSG00000024033)	Ubash3a (ENSMUSG00000042345)	Tmprss3 (ENSMUSG00000024034)	Tff1 (ENSMUSG00000024032)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.a.a	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.a.b	ENSGT00950000182755.b.a.a.b.a.b.a.a.b.a.b	ENSGT00940000154646.C.s.a	ENSGT00940000154646.C.s.b	ENSGT00940000155021.m.a.a ##14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00800000125293	ENSGT00390000011821.a	ENSGT00390000008490	ENSGT00940000154989.t	ENSGT00940000160159	ENSGT00950000183152.B.c.a	ENSGT00510000047027	ENSGT00940000159505.x	ENSGT00390000012196	ENSGT00390000012174	ENSGT00940000155587.a.b	ENSGT00940000159245	ENSGT00940000157240	ENSGT00940000160841	ENSGT00940000158589
spretus	MODERN SPECIES	8	Zfp870 (MGP_SPRETEiJ_G0022307)	Zfp799 (MGP_SPRETEiJ_G0022306)	Zfp811 (MGP_SPRETEiJ_G0022305)	Zfp871 (MGP_SPRETEiJ_G0022304)	Cyp4f15 (MGP_SPRETEiJ_G0022303)	Cyp4f40 (MGP_SPRETEiJ_G0022302)	Cyp4f17 (MGP_SPRETEiJ_G0022300) ##14	Cyp4f39 (MGP_SPRETEiJ_G0022299) #15	Pglyrp2 (MGP_SPRETEiJ_G0022298) #16	Rasal3 (MGP_SPRETEiJ_G0022297) #17	MGP_SPRETEiJ_G0022296 #18	Akap8l (MGP_SPRETEiJ_G0022295) #19	Akap8 (MGP_SPRETEiJ_G0022294) ##19	Brd4 (MGP_SPRETEiJ_G0022293) #20	Ephx3 (MGP_SPRETEiJ_G0022292) #21	Notch3 (MGP_SPRETEiJ_G0022291) #22	Rrp1b (MGP_SPRETEiJ_G0022290)	Hsf2bp (MGP_SPRETEiJ_G0022289)	Sik1 (MGP_SPRETEiJ_G0022288)	Cryaa (MGP_SPRETEiJ_G0022287)	MGP_SPRETEiJ_G0022286	Cbs (MGP_SPRETEiJ_G0022285)	Pknox1 (MGP_SPRETEiJ_G0022284)	Ndufv3 (MGP_SPRETEiJ_G0022283)	Wdr4 (MGP_SPRETEiJ_G0022282)	Pde9a (MGP_SPRETEiJ_G0022281)	Slc37a1 (MGP_SPRETEiJ_G0022280)	Rsph1 (MGP_SPRETEiJ_G0022279)	Ubash3a (MGP_SPRETEiJ_G0022278)	Tmprss3 (MGP_SPRETEiJ_G0022277)	Tff1 (MGP_SPRETEiJ_G0022276)
Steppe mouse	MODERN SPECIES	2335								Cyp4f39 (ENSMSIG00000005240) #15	Pglyrp2 (ENSMSIG00000005276) #16	Rasal3 (ENSMSIG00000005292) #17	Wiz (ENSMSIG00000005353) #18	Akap8l (ENSMSIG00000005494) #19	ENSMSIG00000005542 ##19	ENSMSIG00000005581	Ephx3 (ENSMSIG00000005824) #21	Notch3 (ENSMSIG00000005867) #22	ENSMSIG00000005992
Ryukyu mouse	MODERN SPECIES	8	Zfp811 (MGP_CAROLIEiJ_G0021392)	Zfp871 (MGP_CAROLIEiJ_G0021391)	Cyp4f15 (MGP_CAROLIEiJ_G0021390)	Cyp4f40 (MGP_CAROLIEiJ_G0021389)	MGP_CAROLIEiJ_G0021388 ##14	MGP_CAROLIEiJ_G0021387 ##14	Cyp4f17 (MGP_CAROLIEiJ_G0021386) ##14	Cyp4f39 (MGP_CAROLIEiJ_G0021385) #15	Pglyrp2 (MGP_CAROLIEiJ_G0021384) #16	Rasal3 (MGP_CAROLIEiJ_G0021383) #17	MGP_CAROLIEiJ_G0021382 #18	Akap8l (MGP_CAROLIEiJ_G0021381) #19	Akap8 (MGP_CAROLIEiJ_G0021380) ##19	Brd4 (MGP_CAROLIEiJ_G0021379) #20	Ephx3 (MGP_CAROLIEiJ_G0021378) #21	Notch3 (MGP_CAROLIEiJ_G0021377) #22	Rrp1b (MGP_CAROLIEiJ_G0021376)	MGP_CAROLIEiJ_G0021375	Sik1 (MGP_CAROLIEiJ_G0021374)	Cryaa (MGP_CAROLIEiJ_G0021373)	U2af1 (MGP_CAROLIEiJ_G0021372)	Cbs (MGP_CAROLIEiJ_G0021371)	Pknox1 (MGP_CAROLIEiJ_G0021370)	Ndufv3 (MGP_CAROLIEiJ_G0021369)	Wdr4 (MGP_CAROLIEiJ_G0021368)	Pde9a (MGP_CAROLIEiJ_G0021367)	Slc37a1 (MGP_CAROLIEiJ_G0021366)	Rsph1 (MGP_CAROLIEiJ_G0021365)	Ubash3a (MGP_CAROLIEiJ_G0021364)	Tmprss3 (MGP_CAROLIEiJ_G0021363)	Tff1 (MGP_CAROLIEiJ_G0021362)
Shrew mouse	MODERN SPECIES	9	Zfp870 (MGP_PahariEiJ_G0020400)	Zfp799 (MGP_PahariEiJ_G0020399)	MGP_PahariEiJ_G0020398	Zfp871 (MGP_PahariEiJ_G0020397)	Cyp4f15 (MGP_PahariEiJ_G0020396)	Cyp4f40 (MGP_PahariEiJ_G0020395)	MGP_PahariEiJ_G0020393 #14	Cyp4f39 (MGP_PahariEiJ_G0020392) #15	Pglyrp2 (MGP_PahariEiJ_G0020391) #16	Rasal3 (MGP_PahariEiJ_G0020390) #17	MGP_PahariEiJ_G0020389 #18	Akap8l (MGP_PahariEiJ_G0020388) #19	Akap8 (MGP_PahariEiJ_G0020387) ##19	Brd4 (MGP_PahariEiJ_G0020386) #20	Ephx3 (MGP_PahariEiJ_G0020385) #21	Notch3 (MGP_PahariEiJ_G0020384) #22
Rat	MODERN SPECIES	17	Cyp4f4 (ENSRNOG00000032895)	Cyp4f40 (ENSRNOG00000043344)	ENSRNOG00000067067 ##14	ENSRNOG00000068651	Cyp4f37 (ENSRNOG00000048450) ##14	Cyp4f5 (ENSRNOG00000042496) ##14	Cyp4f39 (ENSRNOG00000029478) #15	Pglyrp2 (ENSRNOG00000042318) #16	Rasal3 (ENSRNOG00000006167) #17	Wiz (ENSRNOG00000006217) #18	Akap8l (ENSRNOG00000006355) #19	Akap8 (ENSRNOG00000006559) ##19	Brd4 (ENSRNOG00000006770) #20	Ephx3 (ENSRNOG00000027319) #21	AABR07055864.2 (ENSRNOG00000060598)	Notch3 (ENSRNOG00000004346) #22	AABR07055861.1 (ENSRNOG00000028146)	Ilvbl (ENSRNOG00000028512) #23	Syde1 (ENSRNOG00000007307) #24	Or1i2 (ENSRNOG00000007348) #25	Casp14 (ENSRNOG00000007352) #26	Ccdc105 (ENSRNOG00000007375) #27	Slc1a6 (ENSRNOG00000007509) #28	Or7c70 (ENSRNOG00000042262) #32	Or7a38e (ENSRNOG00000062508) #30	Or7a39 (ENSRNOG00000065533) #30	Or7a38 (ENSRNOG00000062903) #30	Or7a38c (ENSRNOG00000064163) #30	Or7a38b (ENSRNOG00000065304) #30	Or7a38d (ENSRNOG00000069189) #31	Or7a36 (ENSRNOG00000062310) #31
Upper Galilee mountains blind mole rat	MODERN SPECIES	688				Cdk20 (ENSNGAG00000015145)	ENSNGAG00000013432	ENSNGAG00000003982 ##14	Cyp4f39 (ENSNGAG00000002067) #15	Pglyrp2 (ENSNGAG00000001513) #16	Rasal3 (ENSNGAG00000015073) #17	Wiz (ENSNGAG00000012635) #18	ENSNGAG00000012342 #19	Akap8 (ENSNGAG00000010875) ##19	ENSNGAG00000006488	Ephx3 (ENSNGAG00000000440) #21	ENSNGAG00000016261	Notch3 (ENSNGAG00000004387) #22
Lesser Egyptian jerboa	MODERN SPECIES	256										Rasal3 (ENSJJAG00000014593) #17	Wiz (ENSJJAG00000013018) #18	Akap8l (ENSJJAG00000012334) #19	Akap8 (ENSJJAG00000011639) ##19	Brd4 (ENSJJAG00000010157) #20	Ephx3 (ENSJJAG00000009549) #21	Notch3 (ENSJJAG00000012676) #22	Ilvbl (ENSJJAG00000010226) #23	Syde1 (ENSJJAG00000009758) #24	ENSJJAG00000009634	Casp14 (ENSJJAG00000009615) #26	Ccdc105 (ENSJJAG00000009592) #27	Slc1a6 (ENSJJAG00000009089) #28	Or7a40 (ENSJJAG00000008810) #31
Kangaroo rat	MODERN SPECIES	427	Sin3b (ENSDORG00000010014)	Myo9b (ENSDORG00000014352)	Use1 (ENSDORG00000027734)	ENSDORG00000009450	ENSDORG00000026497	ENSDORG00000028575 #14	Cyp4f39 (ENSDORG00000014108) #15	Pglyrp2 (ENSDORG00000023745) #16	Rasal3 (ENSDORG00000007490) #17	Wiz (ENSDORG00000001773) #18	ENSDORG00000013070 #19	ENSDORG00000027410 ##19	ENSDORG00000025260	ENSDORG00000026409	Ephx3 (ENSDORG00000002211) #21	Notch3 (ENSDORG00000014382) #22	Ilvbl (ENSDORG00000023570) #23	ENSDORG00000025379 #24	Casp14 (ENSDORG00000011308) #26	Slc1a6 (ENSDORG00000003912) #28
Lagomorpha	ANCESTRAL SPECIES	179								ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00800000125293	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28
Rabbit	MODERN SPECIES	562	ENSOCUG00000038987	ENSOCUG00000026315	ENSOCUG00000038818	ENSOCUG00000023277	ENSOCUG00000026901	ENSOCUG00000028100 #12	ENSOCUG00000026416	ENSOCUG00000029480	CYP4F22 (ENSOCUG00000017247) #15	PGLYRP2 (ENSOCUG00000007555) #16	WIZ (ENSOCUG00000004063) #18	AKAP8L (ENSOCUG00000011417) #19	AKAP8 (ENSOCUG00000004051) ##19	ENSOCUG00000013002	EPHX3 (ENSOCUG00000012997) #21	NOTCH3 (ENSOCUG00000022014) #22	ENSOCUG00000035283	ENSOCUG00000025407	ILVBL (ENSOCUG00000002715) #23	SYDE1 (ENSOCUG00000002705) #24	OR1I1 (ENSOCUG00000024852) #25	CASP14 (ENSOCUG00000002710) #26	CCDC105 (ENSOCUG00000024181) #27	SLC1A6 (ENSOCUG00000013354) #28
Pika	MODERN SPECIES	3522																NOTCH3 (ENSOPRG00000014896) #22
Tree shrew	MODERN SPECIES	4045																ENSTBEG00000014922 #22
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000165043	ENSGT01060000248581.A.b #10	ENSGT00940000154646.C	ENSGT00940000164421 #11	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00950000183216.d.a.a.a.a #30	ENSGT00940000162084 #32	ENSGT00950000183216.d.a.a.a.b #30	ENSGT00940000153523 #31	ENSGT00950000183216.d.a.a.b #30	ENSGT00940000164424	ENSGT00940000162597 #33	ENSGT00940000163161 #34
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT01100000263561.C.d.b.a	ENSGT01060000248581.A.b #10	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000154646.C	ENSGT00940000164421 #11	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00940000153523.m.b #31	ENSGT00950000183216.d.a.a.a.a #30	ENSGT00940000153523.m.a.a.a.a.b #31	ENSGT00950000183216.d.a.a.a.b #30	ENSGT00940000153523.m.a.a.b #31	ENSGT00950000183216.d.a.b.b.b #30	ENSGT00940000153523.m.a.b #31
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00940000165043	ENSGT01100000263561.C.d.a.w.a	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00950000183216.d.a.a.b.a.b.b.a.a #30	ENSGT00940000164217.a.a.b	ENSGT00940000163881.b	ENSGT00950000183216.d.a.a.a.a #30	ENSGT00940000153523.m.a.a.a.a.a.b #31	ENSGT00950000183216.d.a.a.b.a.a.b.a #30	ENSGT00940000164217.a.a.a
Suina	ANCESTRAL SPECIES	16	ENSGT01100000263561.C.d.a.w.a	ENSGT00940000165043	ENSGT01100000263561.C.d.a.x	ENSGT00940000163407 #12	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.cb.b #32	ENSGT00940000163967.a	ENSGT00950000183216.d.a.b.b.a.e #30	ENSGT00950000183216.d.a.a.b.a.b.a #30	ENSGT00950000183216.d.a.b.b.b #30	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759
Chacoan peccary	MODERN SPECIES	769	ENSCWAG00000008119	ENSCWAG00000008036	CYP4F3 (ENSCWAG00000007816) #12	ENSCWAG00000009707	ENSCWAG00000009689 #14	CYP4F22 (ENSCWAG00000009588) #15	PGLYRP2 (ENSCWAG00000009528) #16	RASAL3 (ENSCWAG00000009433) #17	WIZ (ENSCWAG00000009199) #18	AKAP8L (ENSCWAG00000009126) #19	AKAP8 (ENSCWAG00000009086) ##19	ENSCWAG00000009037	ENSCWAG00000008990	EPHX3 (ENSCWAG00000008924) #21	ENSCWAG00000008892	NOTCH3 (ENSCWAG00000008816) #22	ILVBL (ENSCWAG00000008774) #23	SYDE1 (ENSCWAG00000008680) #24	OR1I1 (ENSCWAG00000008665) #25	CASP14 (ENSCWAG00000008585) #26	CCDC105 (ENSCWAG00000008495) #27	SLC1A6 (ENSCWAG00000008123) #28	ENSCWAG00000008078 #32	ENSCWAG00000008055	ENSCWAG00000007999	ENSCWAG00000007986	ENSCWAG00000007935	ENSCWAG00000007881	ENSCWAG00000007822 #32	ENSCWAG00000007788 #30	ENSCWAG00000007763 #30
Pig	MODERN SPECIES	10	CYP4F3 (ENSSSCG00000032765) #12	ENSSSCG00000027903	ENSSSCG00000013842	ENSSSCG00000052916 #14	ENSSSCG00000027013 #14	ENSSSCG00000057525 #14	ENSSSCG00000062952 #14	CYP4F22 (ENSSSCG00000023607) #15	PGLYRP2 (ENSSSCG00000025560) #16	RASAL3 (ENSSSCG00000013839) #17	WIZ (ENSSSCG00000013836) #18	AKAP8L (ENSSSCG00000013838) #19	AKAP8 (ENSSSCG00000013837) ##19	BRD4 (ENSSSCG00000022227) #20	EPHX3 (ENSSSCG00000028144) #21	NOTCH3 (ENSSSCG00000025176) #22	ENSSSCG00000037526	ILVBL (ENSSSCG00000013830) #23	SYDE1 (ENSSSCG00000013829) #24	OR1I1 (ENSSSCG00000013828) #25	CASP14 (ENSSSCG00000013835) #26	CCDC105 (ENSSSCG00000013834) #27	SLC1A6 (ENSSSCG00000013833) #28	ENSSSCG00000013832 #32	ENSSSCG00000013831	ENSSSCG00000043515 #30	ENSSSCG00000052015 #32	ENSSSCG00000061169	ENSSSCG00000062192	ENSSSCG00000037286 #30	ENSSSCG00000032027 #30
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT01090000260018.B.a.a	ENSGT01100000263561.C.d.a.w.a	ENSGT01100000263561.C.d.b.a	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00950000183216.d.a.a.b.a.b.b.a.a #30	ENSGT00940000162597.f.b #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT01100000263561.C.d.b.a	ENSGT00940000165043	ENSGT01100000263561.C.d.a.w.a.a	ENSGT01060000248581.A.b.h #10	ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00950000183216.d.a.a.b.a.b.b.a.a #30	ENSGT00940000162597.f.b #33	ENSGT00940000163161 #34	ENSGT01010000228731	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT01100000263561.C.d.a.w.a.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00530000063632.B	ENSGT00940000162750	ENSGT00940000160338	ENSGT01090000259995.b.a.a.b	ENSGT01090000260018.D.d.a	ENSGT01030000234669.A	ENSGT00940000154294.k.a.b	ENSGT00940000154461	ENSGT00940000154294.k.b
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT01100000263561.C.d.a.w.a.b	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00530000063632.B	ENSGT00940000162750	ENSGT00940000160338	ENSGT01090000259995.b.a.a.b	ENSGT01090000260018.D.d.a	ENSGT01030000234669.A	ENSGT00940000154294.k.a.b	ENSGT00940000154461	ENSGT00940000154294.k.b
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000160466	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00530000063632.B	ENSGT00940000162750	ENSGT00940000160338	ENSGT01090000259995.b.a.a.b	ENSGT01090000260018.D.d.a	ENSGT01030000234669.A	ENSGT00940000154294.k.a.b	ENSGT00940000154461	ENSGT00940000154294.k.b
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000160466	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00530000063632.B	ENSGT00940000162750	ENSGT00940000160338	ENSGT01090000259995.b.a.a.b	ENSGT01090000260018.D.d.a	ENSGT01030000234669.A	ENSGT00940000154294.k.a.b	ENSGT00940000154461	ENSGT00940000154294.k.b
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000160466	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00530000063632.B	ENSGT00940000162750	ENSGT00940000160338	ENSGT01090000259995.b.a.a.b	ENSGT01090000260018.D.d.a	ENSGT01030000234669.A	ENSGT00940000154294.k.a.b	ENSGT00940000154461	ENSGT00940000154294.k.b	ENSGT01100000263517.b.d.m.a.b
Narwhal	MODERN SPECIES	298	FAM32A (ENSMMNG00015003638)	CIB3 (ENSMMNG00015003673)	HSH2D (ENSMMNG00015003698) #7	RAB8A (ENSMMNG00015003724) #8	TPM4 (ENSMMNG00015003742) #9	ENSMMNG00015003765	ENSMMNG00015003776 #14	CYP4F22 (ENSMMNG00015003807) #15	PGLYRP2 (ENSMMNG00015003835) #16	RASAL3 (ENSMMNG00015003858) #17	WIZ (ENSMMNG00015003924) #18	AKAP8L (ENSMMNG00015003988) #19	AKAP8 (ENSMMNG00015004009) ##19	BRD4 (ENSMMNG00015004039) #20	EPHX3 (ENSMMNG00015004079) #21	NOTCH3 (ENSMMNG00015004109) #22	ENSMMNG00015004146	ILVBL (ENSMMNG00015004159) #23	SYDE1 (ENSMMNG00015004186) #24	CCDC105 (ENSMMNG00015004201) #27	SLC1A6 (ENSMMNG00015004232) #28	MGAT1 (ENSMMNG00015004274)	ZFP62 (ENSMMNG00015004280)	BTNL9 (ENSMMNG00015004303)	ENSMMNG00015004330	ENSMMNG00015004340	TRIM7 (ENSMMNG00015004356)	TRIM41 (ENSMMNG00015004371)	RACK1 (ENSMMNG00015004400)	TRIM52 (ENSMMNG00015004440)	ENSMMNG00015004450
Beluga whale	MODERN SPECIES	27	ENSDLEG00000007534 #7	RAB8A (ENSDLEG00000007527) #8	TPM4 (ENSDLEG00000007519) #9	ENSDLEG00000007382	CYP4F2 (ENSDLEG00000007351)	ENSDLEG00000007349 #14	CYP4F22 (ENSDLEG00000007343) #15	PGLYRP2 (ENSDLEG00000007335) #16	ENSDLEG00000007333 #17	ENSDLEG00000007326 #17	WIZ (ENSDLEG00000007276) #18	AKAP8L (ENSDLEG00000007195) #19	AKAP8 (ENSDLEG00000007145) ##19	BRD4 (ENSDLEG00000007120) #20	EPHX3 (ENSDLEG00000007108) #21	NOTCH3 (ENSDLEG00000006449) #22	ENSDLEG00000006349	ILVBL (ENSDLEG00000006337) #23	SYDE1 (ENSDLEG00000006330) #24	CCDC105 (ENSDLEG00000006325) #27	SLC1A6 (ENSDLEG00000006317) #28	MGAT1 (ENSDLEG00000006314)	ZFP62 (ENSDLEG00000006310)	BTNL9 (ENSDLEG00000006307)	ENSDLEG00000006302	ENSDLEG00000006298	TRIM7 (ENSDLEG00000006294)	TRIM41 (ENSDLEG00000006284)	RACK1 (ENSDLEG00000006233)	TRIM52 (ENSDLEG00000006217)	ENSDLEG00000006210
Vaquita	MODERN SPECIES	14	FAM32A (ENSPSNG00000001837)	CIB3 (ENSPSNG00000001871)	HSH2D (ENSPSNG00000001906) #7	RAB8A (ENSPSNG00000001927) #8	TPM4 (ENSPSNG00000001964) #9	CYP4F2 (ENSPSNG00000002051)	ENSPSNG00000002149 #14	CYP4F22 (ENSPSNG00000002170) #15	PGLYRP2 (ENSPSNG00000002198) #16	RASAL3 (ENSPSNG00000002232) #17	WIZ (ENSPSNG00000002342) #18	AKAP8L (ENSPSNG00000002475) #19	AKAP8 (ENSPSNG00000002503) ##19	BRD4 (ENSPSNG00000002541) #20	EPHX3 (ENSPSNG00000002597) #21	NOTCH3 (ENSPSNG00000002628) #22	ENSPSNG00000002701	ILVBL (ENSPSNG00000002775) #23	SYDE1 (ENSPSNG00000002802) #24	OR1I1 (ENSPSNG00000002820) #25	CCDC105 (ENSPSNG00000002845) #27	SLC1A6 (ENSPSNG00000002916) #28	MGAT1 (ENSPSNG00000002989)	ZFP62 (ENSPSNG00000003006)	BTNL9 (ENSPSNG00000003070)	ENSPSNG00000003144	TRIM7 (ENSPSNG00000003205)	TRIM41 (ENSPSNG00000003237)	RACK1 (ENSPSNG00000003303)	TRIM52 (ENSPSNG00000003388)	ENSPSNG00000003401
Dolphin	MODERN SPECIES	1890											WIZ (ENSTTRG00000016005) #18	AKAP8L (ENSTTRG00000016002) #19	AKAP8 (ENSTTRG00000015996) ##19	BRD4 (ENSTTRG00000015991) #20	EPHX3 (ENSTTRG00000015989) #21	NOTCH3 (ENSTTRG00000015980) #22
Sperm whale	MODERN SPECIES	11	ENSPCTG00005007059 #10	ENSPCTG00005006993	ENSPCTG00005006962	ENSPCTG00005006951 #10	ENSPCTG00005006922	ENSPCTG00005006894 #11	ENSPCTG00005006572	CYP4F22 (ENSPCTG00005006508) #15	PGLYRP2 (ENSPCTG00005006478) #16	RASAL3 (ENSPCTG00005006427) #17	WIZ (ENSPCTG00005006367) #18	AKAP8L (ENSPCTG00005006328) #19	AKAP8 (ENSPCTG00005006299) ##19	BRD4 (ENSPCTG00005006255) #20	EPHX3 (ENSPCTG00005006204) #21	NOTCH3 (ENSPCTG00005006085) #22	ENSPCTG00005006050	ILVBL (ENSPCTG00005005985) #23	SYDE1 (ENSPCTG00005005955) #24	CCDC105 (ENSPCTG00005005936) #27	SLC1A6 (ENSPCTG00005005809) #28	MGAT1 (ENSPCTG00005005785)	ZFP62 (ENSPCTG00005005773)	ENSPCTG00005002251	ENSPCTG00005002242	ENSPCTG00005002234	TRIM52 (ENSPCTG00005002211)	RACK1 (ENSPCTG00005002140)	ENSPCTG00005002121	ZNF496 (ENSPCTG00005002110)	NLRP3 (ENSPCTG00005002070)
Blue whale	MODERN SPECIES	14	MYOG (ENSBMSG00010002092)	PPFIA4 (ENSBMSG00010001825)	TMEM183A (ENSBMSG00010001791)	ENSBMSG00010001771	ENSBMSG00010001762	ENSBMSG00010001707	ENSBMSG00010001680 #11	CYP4F22 (ENSBMSG00010001655) #15	PGLYRP2 (ENSBMSG00010001628) #16	RASAL3 (ENSBMSG00010001602) #17	WIZ (ENSBMSG00010001410) #18	AKAP8L (ENSBMSG00010001317) #19	AKAP8 (ENSBMSG00010001297) ##19	BRD4 (ENSBMSG00010001216) #20	EPHX3 (ENSBMSG00010001163) #21	NOTCH3 (ENSBMSG00010001081) #22	ILVBL (ENSBMSG00010001043) #23	SYDE1 (ENSBMSG00010001024) #24	CCDC105 (ENSBMSG00010001004) #27	SLC1A6 (ENSBMSG00010000967) #28	MGAT1 (ENSBMSG00010000905)	ZFP62 (ENSBMSG00010000889)	BTNL9 (ENSBMSG00010000859)	TRIM7 (ENSBMSG00010000810)	TRIM41 (ENSBMSG00010000788)	RACK1 (ENSBMSG00010000709)	TRIM52 (ENSBMSG00010000670)	ENSBMSG00010000660	ENSBMSG00010000645	ZNF496 (ENSBMSG00010000617)	NLRP3 (ENSBMSG00010000594)
Pecora	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C.j.b.a	ENSGT00940000154646.C.j.b.b	ENSGT00940000155021.n #14	ENSGT00940000154646.C.j.a.b	ENSGT00940000163407 #12	ENSGT00940000154646.C.j.a.a	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g #25	ENSGT00940000162852.a.h #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.ab.a #32	ENSGT00940000164424	ENSGT00950000183216.d.a.a.b.a.b.b.a.a #30	ENSGT00940000164217.b	ENSGT00950000183216.d.a.a.b.a.a.b.b.a.a #30	ENSGT00950000183216.d.a.b.b.a.c.b #30	ENSGT00950000183216.d.a.a.b.a.b.b.a.b #30
Percora_a	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C.j.b.a	ENSGT00940000154646.C.j.b.b	ENSGT00940000155021.n #14	ENSGT00940000154646.C.j.a.b	ENSGT00940000163407 #12	ENSGT00940000154646.C.j.a.a.a	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g #25	ENSGT00940000162852.a.h #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.ab.a #32	ENSGT00940000164424	ENSGT00950000183216.d.a.a.b.a.b.b.a.a #30	ENSGT00940000164217.b	ENSGT00940000164217.a.b.b	ENSGT00940000163881.a.b	ENSGT00940000163881.a.a
Bovidae	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C.j.b.a	ENSGT00940000154646.C.j.b.b	ENSGT00940000154646.C.j.a.a.b	ENSGT00940000154646.C.j.a.b	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g #25	ENSGT00940000162852.a.h #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.ab.a #32	ENSGT00940000164424	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b	ENSGT00940000163881.b	ENSGT00940000164217.a.a.a	ENSGT00940000162084.ab.b #32
Caprinae	ANCESTRAL SPECIES	32	ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C.j.b.a	ENSGT00940000154646.C.j.b.b	ENSGT00940000154646.C.j.a.a.b	ENSGT00940000154646.C.j.a.b	ENSGT00940000154646.C.j.a.a.a	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g #25	ENSGT00940000162852.a.h #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.ab.a #32	ENSGT00940000164424	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b
Goat	MODERN SPECIES	26	ENSCHIG00000013080	ENSCHIG00000025031	CYP4F47 (ENSCHIG00000017873)	ENSCHIG00000026583	ENSCHIG00000013525	ENSCHIG00000018329	CYP4F50 (ENSCHIG00000023790) #14	CYP4F22 (ENSCHIG00000009101) #15	PGLYRP2 (ENSCHIG00000017394) #16	RASAL3 (ENSCHIG00000018235) #17	WIZ (ENSCHIG00000018501) #18	AKAP8L (ENSCHIG00000005712) #19	AKAP8 (ENSCHIG00000008591) ##19	ENSCHIG00000018824	EPHX3 (ENSCHIG00000025579) #21	NOTCH3 (ENSCHIG00000016952) #22	ENSCHIG00000024762	ILVBL (ENSCHIG00000018122) #23	SYDE1 (ENSCHIG00000024359) #24	CASP14 (ENSCHIG00000018930) #26	CCDC105 (ENSCHIG00000018189) #27	SLC1A6 (ENSCHIG00000009680) #28	ENSCHIG00000009123	ENSCHIG00000002566 #32	ENSCHIG00000010747	ENSCHIG00000018910	ENSCHIG00000011586	ENSCHIG00000016401	ENSCHIG00000007437	ENSCHIG00000015155 #32	ENSCHIG00000008365
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020002873	CYP4F21 (ENSOARG00020002888)	ENSOARG00020002924	ENSOARG00020002976	ENSOARG00020003031	ENSOARG00020003101	CYP4F8 (ENSOARG00020003149) #14	CYP4F22 (ENSOARG00020003197) #15	PGLYRP2 (ENSOARG00020003263) #16	RASAL3 (ENSOARG00020003296) #17	WIZ (ENSOARG00020003398) #18	AKAP8L (ENSOARG00020003575) #19	AKAP8 (ENSOARG00020003610) ##19	ENSOARG00020003710	EPHX3 (ENSOARG00020003764) #21	NOTCH3 (ENSOARG00020003788) #22	ILVBL (ENSOARG00020003902) #23	SYDE1 (ENSOARG00020003935) #24	ENSOARG00020003985 #25	ENSOARG00020004002 #25	ENSOARG00020004010 #25	CASP14 (ENSOARG00020004027) #26	CCDC105 (ENSOARG00020004053) #27	SLC1A6 (ENSOARG00020004107) #28	ENSOARG00020004265	ENSOARG00020004277	EPHA6 (ENSOARG00020004299)	ENSOARG00020004413	ARL6 (ENSOARG00020004425)	CRYBG3 (ENSOARG00020004464)	RIOX2 (ENSOARG00020004577)
Bovinae	ANCESTRAL SPECIES	34	ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C.j.b.a	ENSGT00940000154646.C.j.b.b	ENSGT00940000154646.C.j.a.a.b	ENSGT00940000154646.C.j.a.b	ENSGT00940000163407.j #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g.c #25	ENSGT00940000162852.a.g.d #25	ENSGT00940000162852.a.h #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084.ab.a #32	ENSGT00940000164424	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b	ENSGT00940000163881.b	ENSGT00950000183216.d.a.a.b.b.c.a #30
Bos	ANCESTRAL SPECIES	34	ENSGT00940000154646.C.j.b.a	ENSGT00940000154646.C.j.b.b	ENSGT00940000154646.C.j.a.a.b	ENSGT00940000154646.C.j.a.b	ENSGT00940000163407.j #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT01090000260395	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g.c #25	ENSGT00940000162852.a.g.d #25	ENSGT00940000162852.a.h #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972.b #28	ENSGT00940000162084.ab.a #32	ENSGT00940000164424	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b	ENSGT00940000163881.b	ENSGT00950000183216.d.a.a.b.b.c.a #30
Bos_b	ANCESTRAL SPECIES	36	ENSGT01100000263561.C.d.b.a.h.a.b	ENSGT01060000248581.A.b.h.a.a #10	ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C.j.b.b	ENSGT00940000154646.C.j.a.a.b	ENSGT00940000154646.C.j.a.b	ENSGT00940000154646.C.j.a.a.a	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT01090000260395	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000160625.k.a.a.a	ENSGT00940000158035.i #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g.c #25	ENSGT00940000162852.a.g.d #25	ENSGT00940000162852.a.h #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972.b #28	ENSGT00940000162084.ab.a #32	ENSGT00940000164424	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b	ENSGT00940000163881.b	ENSGT00950000183216.d.a.a.b.b.c.a.b #30
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005007326	ENSBIXG00005016739	ENSBIXG00005016754	ENSBIXG00005016768	ENSBIXG00005016779 #10	ENSBIXG00005016792	ENSBIXG00005016875 #12	ENSBIXG00005017209 #15	PGLYRP2 (ENSBIXG00005017307) #16	RASAL3 (ENSBIXG00005017336) #17	WIZ (ENSBIXG00005007800) #18	AKAP8L (ENSBIXG00005017527) #19	ENSBIXG00005017556	ENSBIXG00005005428	EPHX3 (ENSBIXG00005017692) #21	NOTCH3 (ENSBIXG00005018312) #22	ENSBIXG00005018407	ILVBL (ENSBIXG00005018455) #23	SYDE1 (ENSBIXG00005018485) #24	ENSBIXG00005018496 #25	ENSBIXG00005018505 #25	ENSBIXG00005018514 #25	CASP14 (ENSBIXG00005007720) #26	CCDC105 (ENSBIXG00005018555) #27	SLC1A6 (ENSBIXG00005005854) #28	ENSBIXG00005018622 #32	ENSBIXG00005003016	ENSBIXG00005018652	ENSBIXG00005003027	ENSBIXG00005006588 #30	ENSBIXG00005018699
Cow	MODERN SPECIES	26	OR10H4N (ENSBTAG00000050551)	OR10H1I (ENSBTAG00000006216)	CYP4F2 (ENSBTAG00000039319)	CYP4F47 (ENSBTAG00000038549)	ENSBTAG00000039337	CYP4F2 (ENSBTAG00000025748)	ENSBTAG00000048257 #15	PGLYRP2 (ENSBTAG00000012280) #16	RASAL3 (ENSBTAG00000011602) #17	WIZ (ENSBTAG00000010450) #18	AKAP8L (ENSBTAG00000010439) #19	AKAP8 (ENSBTAG00000001807)	BRD4 (ENSBTAG00000002495)	ENSBTAG00000054865	EPHX3 (ENSBTAG00000020090) #21	NOTCH3 (ENSBTAG00000043971) #22	OR10B1P (ENSBTAG00000040305)	ILVBL (ENSBTAG00000015186) #23	SYDE1 (ENSBTAG00000015184) #24	OR1I4 (ENSBTAG00000054699) #25	OR1I1 (ENSBTAG00000053862) #25	OR1I3 (ENSBTAG00000011496) #25	CASP14 (ENSBTAG00000021106) #26	CCDC105 (ENSBTAG00000020615) #27	SLC1A6 (ENSBTAG00000013502) #28	ENSBTAG00000053903 #28	OR7C19 (ENSBTAG00000039533)	OR7A85 (ENSBTAG00000055037)	ENSBTAG00000051946	OR7A65 (ENSBTAG00000049846)	OR7A100 (ENSBTAG00000036175) #30
Bos_a	ANCESTRAL SPECIES	29	ENSGT01060000248581.A.b.h.a.a #10	ENSGT01100000263561.C.d.a.w.b	ENSGT00940000154646.C.j.b.a	ENSGT00940000154646.C.j.b.b	ENSGT00940000154646.C.j.a.b	ENSGT00940000163407.j #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000160625.k.a.a.a	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a.g.c #25	ENSGT00940000162852.a.g.d #25	ENSGT00940000162852.a.h #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972.b #28	ENSGT00940000164424	ENSGT00940000163967.b.a.a	ENSGT00940000164217.a.a.b	ENSGT00940000164217.a.b.b	ENSGT00940000163881.a.b	ENSGT00940000163881.a.a
Wild yak	MODERN SPECIES	1619	ENSBMUG00000011552	ENSBMUG00000011627	ENSBMUG00000011731	ENSBMUG00000011774	ENSBMUG00000011822 #12	ENSBMUG00000011875 #14	CYP4F22 (ENSBMUG00000011890) #15	PGLYRP2 (ENSBMUG00000011932) #16	RASAL3 (ENSBMUG00000011972) #17	WIZ (ENSBMUG00000012029) #18	AKAP8L (ENSBMUG00000012103) #19	AKAP8 (ENSBMUG00000012119) ##19	ENSBMUG00000012134	ENSBMUG00000012143	EPHX3 (ENSBMUG00000012149) #21	NOTCH3 (ENSBMUG00000013018) #22	ENSBMUG00000013201	ILVBL (ENSBMUG00000013223) #23	ENSBMUG00000013242 #24	ENSBMUG00000013258 #25	ENSBMUG00000013277 #25	ENSBMUG00000013302 #25	CASP14 (ENSBMUG00000013317) #26	CCDC105 (ENSBMUG00000013339) #27	ENSBMUG00000013356 #28	ENSBMUG00000013368 #28	ENSBMUG00000013377	ENSBMUG00000013410	ENSBMUG00000013424	ENSBMUG00000013439	ENSBMUG00000013451
Domestic yak	MODERN SPECIES	27	ENSBGRG00000024273	ENSBGRG00000024190	ENSBGRG00000024011	ENSBGRG00000023854	ENSBGRG00000023633 #12	ENSBGRG00000022876 #14	CYP4F22 (ENSBGRG00000022745) #15	PGLYRP2 (ENSBGRG00000022693) #16	RASAL3 (ENSBGRG00000022665) #17	WIZ (ENSBGRG00000022240) #18	AKAP8L (ENSBGRG00000022043) #19	AKAP8 (ENSBGRG00000021898) ##19	ENSBGRG00000021854	ENSBGRG00000021799	EPHX3 (ENSBGRG00000021673) #21	NOTCH3 (ENSBGRG00000018066) #22	ENSBGRG00000017844	ILVBL (ENSBGRG00000017727) #23	SYDE1 (ENSBGRG00000017591) #24	ENSBGRG00000017568 #25	ENSBGRG00000017455 #25	CASP14 (ENSBGRG00000017337) #26	CCDC105 (ENSBGRG00000017152) #27	SLC1A6 (ENSBGRG00000016741) #28	ENSBGRG00000016668	ENSBGRG00000016627	ENSBGRG00000016606	ENSBGRG00000016595	ENSBGRG00000016543	ENSBGRG00000016482	ENSBGRG00000016374 #30
American bison	MODERN SPECIES	2949	ENSBBBG00000005267	ENSBBBG00000019421	ENSBBBG00000019301 #14	ENSBBBG00000004997 #12	ENSBBBG00000019258 #12	ENSBBBG00000019218 #14	CYP4F22 (ENSBBBG00000019200) #15	PGLYRP2 (ENSBBBG00000019179) #16	RASAL3 (ENSBBBG00000019162) #17	WIZ (ENSBBBG00000019139) #18	AKAP8L (ENSBBBG00000019046) #19	AKAP8 (ENSBBBG00000019017) ##19	ENSBBBG00000018997	ENSBBBG00000004833	EPHX3 (ENSBBBG00000008462) #21	NOTCH3 (ENSBBBG00000018967) #22
Siberian musk deer	MODERN SPECIES	1231	ENSMMSG00000022115	ENSMMSG00000022082	ENSMMSG00000021590	ENSMMSG00000021505 #14	ENSMMSG00000021394	ENSMMSG00000021267	CYP4F8 (ENSMMSG00000021203) #14	CYP4F22 (ENSMMSG00000021161) #15	PGLYRP2 (ENSMMSG00000021135) #16	RASAL3 (ENSMMSG00000021048) #17	WIZ (ENSMMSG00000020867) #18	AKAP8L (ENSMMSG00000020810) #19	AKAP8 (ENSMMSG00000020727) ##19	ENSMMSG00000020672	EPHX3 (ENSMMSG00000020636) #21	NOTCH3 (ENSMMSG00000020568) #22	ILVBL (ENSMMSG00000020513) #23	SYDE1 (ENSMMSG00000020491) #24	CASP14 (ENSMMSG00000020464) #26	CCDC105 (ENSMMSG00000020444) #27	SLC1A6 (ENSMMSG00000020353) #28	OR7C2 (ENSMMSG00000020334) #32	ENSMMSG00000020323	ENSMMSG00000020311 #30	ENSMMSG00000020301	ENSMMSG00000020295	ENSMMSG00000020279	ENSMMSG00000020227	ENSMMSG00000020206	ENSMMSG00000020184 #30	ENSMMSG00000020166 #30
Yarkand deer	MODERN SPECIES	32	ENSCHYG00000002587	ENSCHYG00000002597 #10	ENSCHYG00000002602	ENSCHYG00000002606	ENSCHYG00000002611	ENSCHYG00000002619	ENSCHYG00000002632	ENSCHYG00000002683	ENSCHYG00000002926	PGLYRP2 (ENSCHYG00000003000) #16	RASAL3 (ENSCHYG00000003018) #17	WIZ (ENSCHYG00000003129) #18	AKAP8L (ENSCHYG00000003219) #19	ENSCHYG00000003260	EPHX3 (ENSCHYG00000003283) #21	NOTCH3 (ENSCHYG00000003339) #22	ILVBL (ENSCHYG00000003463) #23	SYDE1 (ENSCHYG00000003512) #24	ENSCHYG00000003530 #25	ENSCHYG00000003541 #25	CASP14 (ENSCHYG00000003552) #26	CCDC105 (ENSCHYG00000003565) #27	SLC1A6 (ENSCHYG00000003600) #28	ENSCHYG00000003662 #32	ENSCHYG00000003672	ENSCHYG00000003676 #30	ENSCHYG00000003687	ENSCHYG00000003701	ENSCHYG00000003709	ENSCHYG00000003718 #30	ENSCHYG00000003727 #32
Camelidae	ANCESTRAL SPECIES	69				ENSGT00940000154646.C	ENSGT01060000248581.A.b #10	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000164217.a.a.b	ENSGT00940000163881.b	ENSGT00950000183216.d.a.a.a.a #30	ENSGT00940000153523.m.a.a.a.a.a.b #31	ENSGT00950000183216.d.a.a.b.a.a.b.a #30	ENSGT00940000162597.f.a #33	ENSGT00940000163161 #34	ENSGT00940000163037 #37
Arabian camel	MODERN SPECIES	14	ENSCDRG00005021568	ENSCDRG00005021571 #10	CYP4F3 (ENSCDRG00005021576) #12	ENSCDRG00005021579 #11	CYP4F8 (ENSCDRG00005021586) #14	CYP4F22 (ENSCDRG00005021598) #15	PGLYRP2 (ENSCDRG00005021601) #16	ENSCDRG00005021605 #17	ENSCDRG00005003622 #17	WIZ (ENSCDRG00005003674) #18	AKAP8L (ENSCDRG00005003903) #19	AKAP8 (ENSCDRG00005003954) ##19	ENSCDRG00005004018	ENSCDRG00005004044	EPHX3 (ENSCDRG00005004082) #21	NOTCH3 (ENSCDRG00005004413) #22	ILVBL (ENSCDRG00005011571) #23	SYDE1 (ENSCDRG00005011837) #24	OR1I1 (ENSCDRG00005011900) #25	CASP14 (ENSCDRG00005011978) #26	CCDC105 (ENSCDRG00005012032) #27	SLC1A6 (ENSCDRG00005012104) #28	OR7C2 (ENSCDRG00005012289) #32	ENSCDRG00005012351	ENSCDRG00005012398	ENSCDRG00005012451	ENSCDRG00005012467 #30	ENSCDRG00005012500 #31	ENSCDRG00005012537 #30	ENSCDRG00005012580 #33	ENSCDRG00005012800 #33
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT01100000263561.C.d.b.a	ENSGT00940000154227.b	ENSGT00940000154646.C	ENSGT00940000164421 #11	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00940000164217	ENSGT00940000163881	ENSGT00950000183216.d.a.a.b.b #30	ENSGT00940000153523.n #31	ENSGT00950000183216.d.a.b.a #30	ENSGT00940000153523.m.a.a.a.a.a.b #31	ENSGT00940000162084 #32
Carnivora	ANCESTRAL SPECIES	6	ENSGT01100000263561.C.d.b.a	ENSGT00940000154227.b	ENSGT00940000164421 #11	ENSGT00940000162906.c.a.f	ENSGT00940000154646.C	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00940000153523.m.b #31	ENSGT00950000183216.d.a.a.a.a #30	ENSGT00940000153523.m.a.a.a.b #31	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000154227.b	ENSGT01100000263561.C.d.b.a.i.b	ENSGT01100000263561.C.d.a.r.a	ENSGT01100000263561.C.d.a.q	ENSGT00940000162906.c.a.f	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00940000153523.m.b.c.a.a.a #31	ENSGT00940000164217.d.b	ENSGT00940000163161 #34	ENSGT00940000163037 #37	ENSGT00940000163153	ENSGT00390000018759	ENSGT00950000182886.a.a.b
Caniformia_b	ANCESTRAL SPECIES	16	ENSGT01100000263561.C.d.b.a.i.b	ENSGT01100000263561.C.d.a.r.a	ENSGT01100000263561.C.d.a.q	ENSGT00940000162906.c.a.f	ENSGT00940000154646.C	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00950000183216.d.a.a.a.b.a.b.b.b #30	ENSGT00940000153523.m.a.a.a.a.b.a.d.a #31	ENSGT00940000162084 #32	ENSGT00950000183216.d.a.a.a.a.f.a.a.b #30	ENSGT00940000153523.m.a.a.a.b.b #31	ENSGT00950000183216.d.a.b.b.b.c #30	ENSGT00940000153523.m.b.c.b.a #31	ENSGT00950000183216.d.a.a.a.a.f.b #30
Ursidae	ANCESTRAL SPECIES	11	ENSGT00940000154227.b	ENSGT01100000263561.C.d.a.r.a	ENSGT01100000263561.C.d.a.q	ENSGT00940000162906.c.a.f	ENSGT00940000154646.C	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00950000183216.d.a.a.a.b.a.b.b.b #30	ENSGT00940000153523.m.a.a.a.a.b.a.d.a #31	ENSGT00940000162084 #32	ENSGT00940000164217.d.a.b	ENSGT00950000183216.d.a.a.a.a.f.a.a.b #30	ENSGT00950000183216.d.a.b.b.b.c #30	ENSGT00940000153523.m.b.c.b.a #31	ENSGT00950000183216.d.a.a.a.a.f.b #30
Ursus	ANCESTRAL SPECIES	200				ENSGT01100000263561.C.d.a.r.a	ENSGT01100000263561.C.d.a.q	ENSGT00940000162906.c.a.f	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28
American black bear	MODERN SPECIES	1565															EPHX3 (ENSUAMG00000027709) #21	NOTCH3 (ENSUAMG00000027713) #22
Polar bear	MODERN SPECIES	291	ENSUMAG00000001197	ENSUMAG00000001207	ENSUMAG00000001217	ENSUMAG00000001240	ENSUMAG00000001258	ENSUMAG00000001272	CYP4F3 (ENSUMAG00000001302) #12	CYP4F22 (ENSUMAG00000001342) #15	PGLYRP2 (ENSUMAG00000001695) #16	RASAL3 (ENSUMAG00000001780) #17	ENSUMAG00000001868 #18	AKAP8L (ENSUMAG00000001892) #19	AKAP8 (ENSUMAG00000001928) ##19	ENSUMAG00000001954	EPHX3 (ENSUMAG00000002156) #21	NOTCH3 (ENSUMAG00000002388) #22	ILVBL (ENSUMAG00000003567) #23	OR1I1 (ENSUMAG00000003584) #25	CASP14 (ENSUMAG00000003591) #26	CCDC105 (ENSUMAG00000003609) #27	SLC1A6 (ENSUMAG00000003627) #28
Giant Panda	MODERN SPECIES	14	ENSAMEG00000023541	ENSAMEG00000026922	ENSAMEG00000029539	ENSAMEG00000019504	ENSAMEG00000018734	ENSAMEG00000025157	ENSAMEG00000013908	ENSAMEG00000002157 #15	PGLYRP2 (ENSAMEG00000024564) #16	RASAL3 (ENSAMEG00000002217) #17	ENSAMEG00000002239 #18	AKAP8 (ENSAMEG00000002281) ##19	AKAP8L (ENSAMEG00000002248) #19	BRD4 (ENSAMEG00000002297) #20	EPHX3 (ENSAMEG00000002340) #21	NOTCH3 (ENSAMEG00000002344) #22	ILVBL (ENSAMEG00000002455) #23	SYDE1 (ENSAMEG00000024049) #24	CASP14 (ENSAMEG00000002496) #26	CCDC105 (ENSAMEG00000024872) #27	ENSAMEG00000002521 #28	OR7C2 (ENSAMEG00000025951) #32	ENSAMEG00000028890	ENSAMEG00000030924 #30	ENSAMEG00000024391 #30	ENSAMEG00000027750 #31	OR7C1 (ENSAMEG00000025106) #32	ENSAMEG00000024874	ENSAMEG00000026321 #30	ENSAMEG00000019090 #32	ENSAMEG00000028843 #31
Mustelinae	ANCESTRAL SPECIES	10	ENSGT01100000263561.C.d.b.a.i.a	ENSGT01060000248581.A.b #10	ENSGT01100000263561.C.d.b.a.i.b	ENSGT01100000263561.C.d.a.r.a	ENSGT01100000263561.C.d.a.q	ENSGT00940000162906.c.a.f	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423.a #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000163881.f.b.a	ENSGT00940000162084.z.b #32	ENSGT00940000153523.m.a.a.a.a.b.a.d.a #31	ENSGT00940000162084.`b #32	ENSGT00950000183216.d.a.a.a.a.f.a.a.b #30	ENSGT00940000153523.m.a.a.a.b.b #31
American mink	MODERN SPECIES	58	ENSNVIG00000012037	ENSNVIG00000012034	ENSNVIG00000012029	ENSNVIG00000011997	CYP4F8 (ENSNVIG00000011913) #14	CYP4F22 (ENSNVIG00000011878) #15	PGLYRP2 (ENSNVIG00000011872) #16	ENSNVIG00000011832 #17	ENSNVIG00000011824 #17	WIZ (ENSNVIG00000011787) #18	AKAP8L (ENSNVIG00000011745) #19	AKAP8 (ENSNVIG00000011718) ##19	ENSNVIG00000011695	ENSNVIG00000011673	EPHX3 (ENSNVIG00000011630) #21	NOTCH3 (ENSNVIG00000011559) #22	ILVBL (ENSNVIG00000011526) #23	SYDE1 (ENSNVIG00000011499) #24	OR1I1 (ENSNVIG00000011479) #25	CASP14 (ENSNVIG00000011472) #26	CCDC105 (ENSNVIG00000011457) #27	SLC1A6 (ENSNVIG00000011419) #28	OR7C2 (ENSNVIG00000011412) #32	ENSNVIG00000011407	ENSNVIG00000011405
Ferret	MODERN SPECIES	238	ENSMPUG00000019674	ENSMPUG00000019675	ENSMPUG00000019676	ENSMPUG00000019677	ENSMPUG00000019678	ENSMPUG00000016058	CYP4F8 (ENSMPUG00000016059) #14	CYP4F22 (ENSMPUG00000016061) #15	PGLYRP2 (ENSMPUG00000016064) #16	RASAL3 (ENSMPUG00000016066) #17	WIZ (ENSMPUG00000016070) #18	AKAP8L (ENSMPUG00000016078) #19	AKAP8 (ENSMPUG00000016081) ##19	BRD4 (ENSMPUG00000016088) #20	EPHX3 (ENSMPUG00000016089) #21	NOTCH3 (ENSMPUG00000016090) #22	ENSMPUG00000019679	ILVBL (ENSMPUG00000016157) #23	SYDE1 (ENSMPUG00000016160) #24	OR1I1 (ENSMPUG00000019680) #25	CASP14 (ENSMPUG00000016163) #26	CCDC105 (ENSMPUG00000016166) #27	SLC1A6 (ENSMPUG00000016168) #28	OR7C2 (ENSMPUG00000019681) #32	ENSMPUG00000016169 #31	ENSMPUG00000019682	ENSMPUG00000019683 #30	ENSMPUG00000016171	ENSMPUG00000016172 #30	ENSMPUG00000019684	ENSMPUG00000019685 #32
Canidae	ANCESTRAL SPECIES		ENSGT01100000263561.C.d.b.a.i.a	ENSGT00940000154227.b.g	ENSGT01100000263561.C.d.a.r.a	ENSGT01100000263561.C.d.a.q	ENSGT00940000162906.c.a.f	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00940000153523.m.b.c.a.a.a #31	ENSGT00940000164217.d.b	ENSGT00950000183216.d.a.b.b.b.c #30	ENSGT00940000164217.d.a.a.a	ENSGT00940000153523.m.b.c.a.a.b.a #31	ENSGT00940000153523.m.a.a.a.a.a.b #31	ENSGT00940000162084 #32	ENSGT00940000163881.f.a
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000154227.b.g	ENSGT01100000263561.C.d.a.r.a	ENSGT01100000263561.C.d.a.q	ENSGT00940000162906.c.a.f	ENSGT00940000154646.C	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00940000153523.m.b.c.a.a.a #31	ENSGT00940000164217.d.b	ENSGT00950000183216.d.a.b.b.b.c #30	ENSGT00940000164217.d.a.a.a	ENSGT00940000153523.m.b.c.a.a.b.a #31	ENSGT00940000153523.m.a.a.a.a.a.b #31	ENSGT00940000162084 #32	ENSGT00940000163881.f.a
Dog	MODERN SPECIES	12	OR10H4D (ENSCAFG00845015413)	ENSCAFG00845015428 #10	OR10H4C (ENSCAFG00845015442) #10	OR10H1E (ENSCAFG00845015463) #10	OR10H5B (ENSCAFG00845015484)	ENSCAFG00845015502	ENSCAFG00845015524	ENSCAFG00845015783	ENSCAFG00845016360 #15	PGLYRP2 (ENSCAFG00845016433) #16	RASAL3 (ENSCAFG00845016503) #17	WIZ (ENSCAFG00845017125) #18	AKAP8 (ENSCAFG00845017790) ##19	BRD4 (ENSCAFG00845018129)	EPHX3 (ENSCAFG00845018546) #21	NOTCH3 (ENSCAFG00845018638) #22	ILVBL (ENSCAFG00845018872) #23	SYDE1 (ENSCAFG00845019022) #24	OR1I1 (ENSCAFG00845019109) #25	CASP14 (ENSCAFG00845019146) #26	ENSCAFG00845019211	CCDC105 (ENSCAFG00845019260) #27	SLC1A6 (ENSCAFG00845019363) #28	OR7C19 (ENSCAFG00845019569)	OR7A26 (ENSCAFG00845019591) #31	ENSCAFG00845019620	OR7A56 (ENSCAFG00845019791) #30	OR7A71 (ENSCAFG00845019809)	ENSCAFG00845019840 #31	ENSCAFG00845019854 #31	OR7A17 (ENSCAFG00845019869) #31
Dingo	MODERN SPECIES	112	ENSCAFG00020009635	ENSCAFG00020009625	ENSCAFG00020009621	ENSCAFG00020009613 #12	ENSCAFG00020009611 #12	CYP4F8 (ENSCAFG00020009605) #14	CYP4F22 (ENSCAFG00020009588) #15	PGLYRP2 (ENSCAFG00020009549) #16	RASAL3 (ENSCAFG00020009538) #17	WIZ (ENSCAFG00020009522) #18	AKAP8L (ENSCAFG00020009405) #19	AKAP8 (ENSCAFG00020009384) ##19	ENSCAFG00020009378	ENSCAFG00020009367	EPHX3 (ENSCAFG00020009361) #21	NOTCH3 (ENSCAFG00020008048) #22	ILVBL (ENSCAFG00020007952) #23	SYDE1 (ENSCAFG00020007950) #24	CASP14 (ENSCAFG00020007940) #26	CCDC105 (ENSCAFG00020007933) #27	SLC1A6 (ENSCAFG00020007848) #28	OR1I1 (ENSCAFG00020007835) #25	ENSCAFG00020007829 #31	ENSCAFG00020007824	ENSCAFG00020007823 #30	ENSCAFG00020007818	ENSCAFG00020007812 #31	ENSCAFG00020007803 #32	ENSCAFG00020007791 #30	ENSCAFG00020007787	ENSCAFG00020007779 #30
Red fox	MODERN SPECIES	5	ENSVVUG00000020322	ENSVVUG00000020323	ENSVVUG00000020324	ENSVVUG00000020325	ENSVVUG00000020329	CYP4F2 (ENSVVUG00000020330)	CYP4F8 (ENSVVUG00000020339) #14	CYP4F22 (ENSVVUG00000020345) #15	PGLYRP2 (ENSVVUG00000020368) #16	RASAL3 (ENSVVUG00000020370) #17	WIZ (ENSVVUG00000020383) #18	AKAP8L (ENSVVUG00000020394) #19	AKAP8 (ENSVVUG00000020457) ##19	ENSVVUG00000020467	EPHX3 (ENSVVUG00000020533) #21	NOTCH3 (ENSVVUG00000020620) #22	ILVBL (ENSVVUG00000021444) #23	SYDE1 (ENSVVUG00000021449) #24	ENSVVUG00000021453	CASP14 (ENSVVUG00000021454) #26	CCDC105 (ENSVVUG00000021459) #27	SLC1A6 (ENSVVUG00000021456) #28	OR7C2 (ENSVVUG00000021463) #32	ENSVVUG00000021464 #30	ENSVVUG00000021466	ENSVVUG00000021467 #30	ENSVVUG00000021468	ENSVVUG00000021469 #31	ENSVVUG00000021470 #31	ENSVVUG00000021471	ENSVVUG00000021472 #32
Felidae	ANCESTRAL SPECIES	17	ENSGT00940000164421 #11	ENSGT01100000263561.C.d.a.p	ENSGT00940000162906.c.a.f	ENSGT00940000154646.C	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.a.a.a.b #30	ENSGT00940000164424	ENSGT00940000153523.m.b.a #31	ENSGT00940000164217.d	ENSGT00950000183216.d.a.a.a.a.c #30	ENSGT00940000153523.m.a.a.a.a.b.a #31	ENSGT00940000153523.m.a.b.c.a #31	ENSGT00950000183216.d.a.b.b.b.e #30	ENSGT00940000153523.m.a.a.b #31
Panthera	ANCESTRAL SPECIES	1	ENSGT01100000263561.C.d.b.a	ENSGT01060000248581.A.b.c.a.b #10	ENSGT01060000248581.A.b.c.a.a #10	ENSGT00940000154227.b	ENSGT01060000248581.A.b.c.b #10	ENSGT01100000263561.C.d.a.o.a	ENSGT00940000163407 #12	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00940000153523.m.b.a #31	ENSGT00940000164217.d	ENSGT00940000153523.m.a.a.a.a.b.a #31	ENSGT00940000153523.m.a.b.c.a #31	ENSGT00950000183216.d.a.b.b.b.e #30	ENSGT00940000153523.m.a.a.b #31	ENSGT00950000183216.d.a.a.a.b #30	ENSGT00940000162084 #32	ENSGT00940000153523.m.a.b.d #31
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000154227.b.i	ENSGT01060000248581.A.b.c.b #10	ENSGT01100000263561.C.d.a.o.a	ENSGT01100000263561.C.d.a.p	ENSGT00940000162906.c.a.f	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718.g #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000164424	ENSGT00940000153523.m.b.a #31	ENSGT00940000164217.d	ENSGT00940000153523.m.a.a.a.a.b.a #31	ENSGT00940000153523.m.a.b.c.a #31	ENSGT00950000183216.d.a.b.b.b.e #30	ENSGT00940000153523.m.a.a.b #31	ENSGT00950000183216.d.a.a.a.b #30	ENSGT00940000162084 #32	ENSGT00950000183216.d.a.a.a.a.c #30
lion	MODERN SPECIES	2	ENSPLOG00000000987	ENSPLOG00000000975	ENSPLOG00000000957	ENSPLOG00000000908 #12	ENSPLOG00000000866 #12	ENSPLOG00000000847 #14	CYP4F22 (ENSPLOG00000000828) #15	PGLYRP2 (ENSPLOG00000000711) #16	RASAL3 (ENSPLOG00000000606) #17	WIZ (ENSPLOG00000000541) #18	AKAP8L (ENSPLOG00000000459) #19	AKAP8 (ENSPLOG00000000489) ##19	ENSPLOG00000000417	ENSPLOG00000000383	EPHX3 (ENSPLOG00000000351) #21	NOTCH3 (ENSPLOG00000000296) #22	ILVBL (ENSPLOG00000000240) #23	SYDE1 (ENSPLOG00000000218) #24	CASP14 (ENSPLOG00000000190) #26	CCDC105 (ENSPLOG00000000174) #27	SLC1A6 (ENSPLOG00000000144) #28	ENSPLOG00000000117 #31	ENSPLOG00000000103 #31	ENSPLOG00000000099 #30	ENSPLOG00000000090 #31	OR7C1 (ENSPLOG00000000087) #32	ENSPLOG00000000082 #31	ENSPLOG00000000064	ENSPLOG00000000036	ZNF333 (ENSPLOG00000022645) #34	ADGRE3 (ENSPLOG00000022632) #37
leopard	MODERN SPECIES	68	ENSPPRG00000022821	ENSPPRG00000020913	ENSPPRG00000000160	CYP4F3 (ENSPPRG00000001769)	ENSPPRG00000002280 #14	ENSPPRG00000002620 #14	CYP4F22 (ENSPPRG00000002745) #15	ENSPPRG00000003320 #16	RASAL3 (ENSPPRG00000004906) #17	ENSPPRG00000006238 #18	AKAP8L (ENSPPRG00000009539) #19	AKAP8 (ENSPPRG00000010081) ##19	ENSPPRG00000010955	ENSPPRG00000011126	EPHX3 (ENSPPRG00000012477) #21	NOTCH3 (ENSPPRG00000014001) #22	ILVBL (ENSPPRG00000014803) #23	SYDE1 (ENSPPRG00000017777) #24	CASP14 (ENSPPRG00000021751) #26	CCDC105 (ENSPPRG00000022023) #27	SLC1A6 (ENSPPRG00000024748) #28	ENSPPRG00000021678	ENSPPRG00000021692 #31	ENSPPRG00000021715	ENSPPRG00000021727 #31	ENSPPRG00000021739 #31	ENSPPRG00000024155 #30	ENSPPRG00000023301 #31	ENSPPRG00000023036 #30	ENSPPRG00000021791 #32	ENSPPRG00000021810 #30
Tiger	MODERN SPECIES	281	ENSPTIG00000006059 #10	ENSPTIG00000006054 #10	ENSPTIG00000006049	ENSPTIG00000015652	ENSPTIG00000015129	CYP4F140 (ENSPTIG00000014950) #12	CYP4F22 (ENSPTIG00000014642) #15	RASAL3 (ENSPTIG00000012857) #17	ENSPTIG00000012570 #18	ENSPTIG00000012019 #18	AKAP8L (ENSPTIG00000011001) #19	AKAP8 (ENSPTIG00000010640) ##19	ENSPTIG00000010402	ENSPTIG00000010124	EPHX3 (ENSPTIG00000009507) #21	NOTCH3 (ENSPTIG00000007860) #22	ILVBL (ENSPTIG00000006713) #23	CASP14 (ENSPTIG00000006110) #26	SLC1A6 (ENSPTIG00000004455) #28	ENSPTIG00000005763 #31	ENSPTIG00000000041	ENSPTIG00000005756 #31	ENSPTIG00000020734 #31	ENSPTIG00000005740 #32	ENSPTIG00000020423 #30	ENSPTIG00000020136	ENSPTIG00000005723 #30
Cat	MODERN SPECIES	1	ENSFCAG00000047898	OR10H1 (ENSFCAG00000041665)	ENSFCAG00000052294 #10	OR10H4 (ENSFCAG00000036085) #10	ENSFCAG00000044421	ENSFCAG00000048595 #11	CYP4F140 (ENSFCAG00000008623) #14	CYP4F22 (ENSFCAG00000028754) #15	PGLYRP2 (ENSFCAG00000013649) #16	RASAL3 (ENSFCAG00000018305) #17	WIZ (ENSFCAG00000013648) #18	AKAP8L (ENSFCAG00000034698) #19	AKAP8 (ENSFCAG00000013646) ##19	BRD4 (ENSFCAG00000000916) #20	EPHX3 (ENSFCAG00000028947) #21	NOTCH3 (ENSFCAG00000000914) #22	ILVBL (ENSFCAG00000014753) #23	SYDE1 (ENSFCAG00000037273) #24	CASP14 (ENSFCAG00000007876) #26	CCDC105 (ENSFCAG00000028275) #27	SLC1A6 (ENSFCAG00000007501) #28	OR7C2 (ENSFCAG00000052184) #32	ENSFCAG00000051426	ENSFCAG00000034190 #31	ENSFCAG00000047130 #31	ENSFCAG00000040947 #31	ENSFCAG00000045491 #30	ENSFCAG00000035954 #31	ENSFCAG00000046417 #30	OR7C1 (ENSFCAG00000032648) #32	ENSFCAG00000042891 #30
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT01090000260018.B.a.a	ENSGT01100000263561.C.d.a	ENSGT00940000164421 #11	ENSGT00940000154646.C	ENSGT00940000163407 #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT01060000248581.A.b #10	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000164424	ENSGT00940000164217	ENSGT00950000183216.d.a.b.a #30	ENSGT00940000153523.n #31	ENSGT00950000183216.d.a.a.b.b #30
Equus	ANCESTRAL SPECIES	23	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT01090000260018.B.a.a	ENSGT00940000154646.C.e.a	ENSGT00940000163407.b #12	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00800000125293	ENSGT00940000160234 #22	ENSGT01060000248581.A.b #10	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00940000164424	ENSGT00940000164217	ENSGT00950000183216.d.a.a.b.a.b.b.b.a #30	ENSGT00940000153301.b.a.a.r.a.b
Horse	MODERN SPECIES	13	RAB8A (ENSECAG00000053880) #8	CYP4F127P (ENSECAG00000019543)	ENSECAG00000058777	ENSECAG00000046973	CYP4F119 (ENSECAG00000019949) #14	ENSECAG00000034511 #16	ENSECAG00000046401	CYP4F22 (ENSECAG00000012358) #15	RASAL3 (ENSECAG00000009236) #17	WIZ (ENSECAG00000008043) #18	AKAP8L (ENSECAG00000023532) #19	AKAP8 (ENSECAG00000015084)	BRD4 (ENSECAG00000030438)	EPHX3 (ENSECAG00000018245) #21	ENSECAG00000037674	NOTCH3 (ENSECAG00000021331) #22	ENSECAG00000054944	ENSECAG00000058722	ILVBL (ENSECAG00000017231) #23	SYDE1 (ENSECAG00000016064) #24	OR1I5 (ENSECAG00000004718) #25	CASP14 (ENSECAG00000012619) #26	CCDC105 (ENSECAG00000008463) #27	SLC1A6 (ENSECAG00000018959) #28	OR7A188 (ENSECAG00000037266) #30	ENSECAG00000047702 #30	ENSECAG00000056254	OR5T40 (ENSECAG00000030841)	ENSECAG00000059591	ENSECAG00000032551 #11	CYP4F126P (ENSECAG00000017014) #12
Donkey	MODERN SPECIES	1	ENSEASG00005034829 #10	ENSEASG00005037744	ENSEASG00005005112	ENSEASG00005031031	ENSEASG00005033425	ENSEASG00005037980 #12	ENSEASG00005038287 #14	CYP4F22 (ENSEASG00005003782) #15	PGLYRP2 (ENSEASG00005026655) #16	RASAL3 (ENSEASG00005003674) #17	WIZ (ENSEASG00005003665) #18	AKAP8L (ENSEASG00005003631) #19	AKAP8 (ENSEASG00005003609) ##19	BRD4 (ENSEASG00005003542) #20	EPHX3 (ENSEASG00005003519) #21	NOTCH3 (ENSEASG00005003135) #22	ENSEASG00005003516	ILVBL (ENSEASG00005003038) #23	SYDE1 (ENSEASG00005003030) #24	OR1I1 (ENSEASG00005003025) #25	CASP14 (ENSEASG00005003020) #26	CCDC105 (ENSEASG00005003015) #27	SLC1A6 (ENSEASG00005003010) #28	ENSEASG00005003007 #32	ENSEASG00005024379	ENSEASG00005037945	ENSEASG00005025328 #30	ENSEASG00005032210	ENSEASG00005033344	ENSEASG00005000817	ENSEASG00005000846
Chiroptera	ANCESTRAL SPECIES	44	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT01090000260018.B.a.a	ENSGT01100000263561.C.d.a	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.a.b.a #30	ENSGT00940000153523.n #31	ENSGT00950000183216.d.a.a.b.b.e.a #30	ENSGT00940000163881
Megabat	MODERN SPECIES	3819															EPHX3 (ENSPVAG00000007782) #21	NOTCH3 (ENSPVAG00000007778) #22	ILVBL (ENSPVAG00000007777) #23	SYDE1 (ENSPVAG00000007776) #24	CASP14 (ENSPVAG00000007772) #26
Microchiroptera	ANCESTRAL SPECIES	43	ENSGT00940000160466	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT01090000260018.B.a.a	ENSGT00940000154646.C	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.c	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216.d.a.b.a #30	ENSGT00940000153523.n #31	ENSGT00950000183216.d.a.a.b.b.e.a #30	ENSGT00940000163881
Microbat	MODERN SPECIES	1217	ENSMLUG00000009960	ENSMLUG00000017518	ENSMLUG00000029631	ENSMLUG00000026342	ENSMLUG00000028047	ENSMLUG00000023349	CYP4F8 (ENSMLUG00000024967) #14	CYP4F22 (ENSMLUG00000005489) #15	PGLYRP2 (ENSMLUG00000005486) #16	RASAL3 (ENSMLUG00000027885) #17	WIZ (ENSMLUG00000005482) #18	AKAP8L (ENSMLUG00000005469) #19	ENSMLUG00000027375 ##19	ENSMLUG00000004852	EPHX3 (ENSMLUG00000029171) #21	NOTCH3 (ENSMLUG00000004827) #22	ILVBL (ENSMLUG00000004813) #23	SYDE1 (ENSMLUG00000004803) #24	OR1I1 (ENSMLUG00000015963) #25	CASP14 (ENSMLUG00000025660) #26	CCDC105 (ENSMLUG00000014791) #27	SLC1A6 (ENSMLUG00000009325) #28	OR7C2 (ENSMLUG00000009312) #32	ENSMLUG00000025485 #30	ENSMLUG00000029596 #30	ENSMLUG00000029177 #31	ENSMLUG00000025146 #30	ENSMLUG00000027873 #31
Greater horseshoe bat	MODERN SPECIES	9	HSH2D (ENSRFEG00010012382) #7	RAB8A (ENSRFEG00010012312) #8	ENSRFEG00010012178 #9	ENSRFEG00010012141	ENSRFEG00010012117	ENSRFEG00010012095	CYP4F8 (ENSRFEG00010011485) #14	CYP4F22 (ENSRFEG00010011350) #15	PGLYRP2 (ENSRFEG00010011265) #16	RASAL3 (ENSRFEG00010011211) #17	WIZ (ENSRFEG00010010988) #18	AKAP8L (ENSRFEG00010010807) #19	AKAP8 (ENSRFEG00010010701) ##19	BRD4 (ENSRFEG00010010523) #20	EPHX3 (ENSRFEG00010010444) #21	NOTCH3 (ENSRFEG00010010386) #22	ENSRFEG00010021724	ILVBL (ENSRFEG00010021714) #23	SYDE1 (ENSRFEG00010021702) #24	CASP14 (ENSRFEG00010021690) #26	CCDC105 (ENSRFEG00010021677) #27	SLC1A6 (ENSRFEG00010021657) #28	ENSRFEG00010021638 #32	ENSRFEG00010021633 #30	ENSRFEG00010021628 #30	ENSRFEG00010021618 #30	ENSRFEG00010021615 #30	ENSRFEG00010021611 #30	ENSRFEG00010021607 #30	ENSRFEG00010021603 #30	ENSRFEG00010021596 #31
Atlantogenata	ANCESTRAL SPECIES	42	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT00940000165043	ENSGT01100000263561.C.d.a	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162084 #32	ENSGT00950000183216 #30	ENSGT00950000183069	ENSGT00940000162163
Afrotheria	ANCESTRAL SPECIES	45	ENSGT00940000160466	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT00940000165043	ENSGT01100000263561.C.d.a	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28
Afrotheria_a	ANCESTRAL SPECIES	44	ENSGT00940000160466	ENSGT00940000161678 #7	ENSGT00940000157246 #8	ENSGT01030000234542.b.b.a.a.a.b #9	ENSGT00940000162704	ENSGT00940000165043	ENSGT01100000263561.C.d.a	ENSGT00940000155021.n #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT00940000154227.b	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28
Elephant	MODERN SPECIES	270	ENSLAFG00000031874	ENSLAFG00000026585	ENSLAFG00000030034	ENSLAFG00000003300	ENSLAFG00000029003	ENSLAFG00000029960	ENSLAFG00000030083 #14	CYP4F22 (ENSLAFG00000023092) #15	ENSLAFG00000008772 #16	RASAL3 (ENSLAFG00000020948) #17	WIZ (ENSLAFG00000004604) #18	AKAP8L (ENSLAFG00000004599) #19	AKAP8 (ENSLAFG00000026120) ##19	ENSLAFG00000030134	EPHX3 (ENSLAFG00000000695) #21	NOTCH3 (ENSLAFG00000031040) #22	ENSLAFG00000031179	ENSLAFG00000025846	ILVBL (ENSLAFG00000003259) #23	ENSLAFG00000030501 #24	OR1I1 (ENSLAFG00000032391) #25	CASP14 (ENSLAFG00000031913) #26	CCDC105 (ENSLAFG00000000999) #27	SLC1A6 (ENSLAFG00000011311) #28	ENSLAFG00000032506	ENSLAFG00000002220 #30	ENSLAFG00000027481	ENSLAFG00000026701	ENSLAFG00000029250	ENSLAFG00000025813	ENSLAFG00000026005
Hyrax	MODERN SPECIES	6375																NOTCH3 (ENSPCAG00000014289) #22
Tenrec	MODERN SPECIES	798																ENSETEG00000017322 #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT01100000263561.C.f.a.a	ENSGT00940000162906.c.a	ENSGT00940000155021.n.x #14	ENSGT00940000155021.n.w.a.b #14	ENSGT00940000155021.n.w.a.a #14	ENSGT00940000155021.n.w.b #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.e	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162014.f	ENSGT00940000162014.e.b.a.a	ENSGT00940000162014.e.a.a	ENSGT00940000162014.e.a.b	ENSGT00390000008152.B.a	ENSGT00390000007227.b	ENSGT00390000000719	ENSGT00940000160464
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT01100000263561.C.f.a.a	ENSGT00940000162906.c.a	ENSGT00940000155021.n.x #14	ENSGT00940000155021.n.w.a.b #14	ENSGT00940000155021.n.w.a.a #14	ENSGT00940000155021.n.w.b #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.e	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162014.f.b.a	ENSGT00940000162014.e.b.a.a	ENSGT00940000162014.e.a.a	ENSGT00940000162014.e.a.b	ENSGT00390000008152.B.a	ENSGT00390000007227.b	ENSGT00390000000719	ENSGT00940000160464
Diprotodontia	ANCESTRAL SPECIES	20	ENSGT01100000263561.C.f.b	ENSGT00940000165043.f	ENSGT01100000263561.C.f.a.b	ENSGT01100000263561.C.f.a.a	ENSGT00940000162906.c.a	ENSGT00940000155021.n.w.a.a #14	ENSGT00940000155021.n.w.b #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.e	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162014.f.b.a	ENSGT00940000162014.e.b.a.a	ENSGT00940000162014.e.a.a	ENSGT00390000008152.B.a	ENSGT00390000007227.b	ENSGT00390000000719	ENSGT00940000160464	ENSGT00390000004097.a
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT01100000263561.C.f.b	ENSGT00940000165043.f	ENSGT01100000263561.C.f.a.b	ENSGT01100000263561.C.f.a.a	ENSGT00940000162906.c.a	ENSGT00940000155021.n.w.a.a #14	ENSGT00940000155021.n.w.b #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000162086 #21	ENSGT00940000160234 #22	ENSGT01100000263561.C.e	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000162852.a #25	ENSGT00940000162117 #26	ENSGT00390000003207 #27	ENSGT00940000159972 #28	ENSGT00940000162014.f.b.a	ENSGT00940000162014.e.b.a.a	ENSGT00940000162014.e.a.a	ENSGT00390000008152.B.a	ENSGT00390000007227.b	ENSGT00390000000719	ENSGT00940000160464	ENSGT00390000004097.a
Common wonbat	MODERN SPECIES	580	ENSVURG00010024918	ENSVURG00010024917	ENSVURG00010024916	ENSVURG00010024909 #14	ENSVURG00010024897 #14	CYP4F22 (ENSVURG00010024894) #15	PGLYRP2 (ENSVURG00010024892) #16	RASAL3 (ENSVURG00010024888) #17	WIZ (ENSVURG00010024884) #18	AKAP8L (ENSVURG00010024874) #19	AKAP8 (ENSVURG00010024869) ##19	ENSVURG00010024866	ENSVURG00010024864	EPHX3 (ENSVURG00010024863) #21	ENSVURG00010024861	NOTCH3 (ENSVURG00010024859) #22	ENSVURG00010024857	ILVBL (ENSVURG00010024855) #23	SYDE1 (ENSVURG00010024852) #24	OR1I1 (ENSVURG00010024850) #25	CASP14 (ENSVURG00010024849) #26	ENSVURG00010024848 #27	SLC1A6 (ENSVURG00010024846) #28	ENSVURG00010024843	ENSVURG00010024842	ENSVURG00010024841	ENSVURG00010024840	CILP2 (ENSVURG00010024838)	YJEFN3 (ENSVURG00010024837)	NDUFA13 (ENSVURG00010024836)	TSSK6 (ENSVURG00010024835)
koala	MODERN SPECIES	190	ENSPCIG00000004785	ENSPCIG00000032799 #14	ENSPCIG00000005143 #14	ENSPCIG00000024857 #14	CYP4F22 (ENSPCIG00000004755) #15	ENSPCIG00000004728	ENSPCIG00000004722 #16	RASAL3 (ENSPCIG00000004702) #17	ENSPCIG00000004692 #18	ENSPCIG00000004684 #18	AKAP8L (ENSPCIG00000004037) #19	AKAP8 (ENSPCIG00000004006) ##19	ENSPCIG00000003344	ENSPCIG00000034860	EPHX3 (ENSPCIG00000003286) #21	NOTCH3 (ENSPCIG00000026508) #22	ENSPCIG00000026509	ILVBL (ENSPCIG00000003271) #23	SYDE1 (ENSPCIG00000003261) #24	OR1I1 (ENSPCIG00000003241) #25	CASP14 (ENSPCIG00000003224) #26	ENSPCIG00000003213	CCDC105 (ENSPCIG00000003198) #27	SLC1A6 (ENSPCIG00000003178) #28	ENSPCIG00000011974	ENSPCIG00000031404	ENSPCIG00000032437	ENSPCIG00000027489	CILP2 (ENSPCIG00000024194)	YJEFN3 (ENSPCIG00000024192)	NDUFA13 (ENSPCIG00000024191)
Wallaby	MODERN SPECIES	9169																NOTCH3 (ENSMEUG00000005154) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000024202	ENSSHAG00000006947	ENSSHAG00000006421	ENSSHAG00000004221 #14	CYP4F8 (ENSSHAG00000005841) #14	ENSSHAG00000003263 #14	ENSSHAG00000002575 #14	ENSSHAG00000001890 #14	CYP4F22 (ENSSHAG00000006919) #15	PGLYRP2 (ENSSHAG00000011443) #16	RASAL3 (ENSSHAG00000011132) #17	ENSSHAG00000010834 #18	AKAP8L (ENSSHAG00000022803) #19	AKAP8 (ENSSHAG00000023419) ##19	BRD4 (ENSSHAG00000009124) #20	NOTCH3 (ENSSHAG00000008456) #22	ENSSHAG00000022612	ENSSHAG00000030842	ILVBL (ENSSHAG00000007682) #23	SYDE1 (ENSSHAG00000007646) #24	OR1I1 (ENSSHAG00000007285) #25	CASP14 (ENSSHAG00000006793) #26	ENSSHAG00000006176 #27	ENSSHAG00000005674 #28	ENSSHAG00000030371	ENSSHAG00000030674	ENSSHAG00000021932	ENSSHAG00000021019	ENSSHAG00000021504	ENSSHAG00000029707	ENSSHAG00000025895
Opossum	MODERN SPECIES	2	ENSMODG00000047513	ENSMODG00000029440	CYP4F8 (ENSMODG00000014754) #14	ENSMODG00000014717 #14	ENSMODG00000023822	ENSMODG00000014674 #14	ENSMODG00000014425 #14	CYP4F22 (ENSMODG00000014622) #15	PGLYRP2 (ENSMODG00000014610) #16	WIZ (ENSMODG00000014589) #18	AKAP8L (ENSMODG00000014581) #19	AKAP8 (ENSMODG00000014573) ##19	ENSMODG00000040284	ENSMODG00000014558	EPHX3 (ENSMODG00000041517) #21	NOTCH3 (ENSMODG00000014540) #22	ENSMODG00000050252	ILVBL (ENSMODG00000014519) #23	SYDE1 (ENSMODG00000014508) #24	ENSMODG00000048274	OR1I1 (ENSMODG00000014497) #25	CASP14 (ENSMODG00000039253) #26	ENSMODG00000014485 #27	SLC1A6 (ENSMODG00000014481) #28	ENSMODG00000014469	ENSMODG00000036910	ENSMODG00000044017	ENSMODG00000039698	ENSMODG00000023842	ENSMODG00000050288	ENSMODG00000041250
Sauria	ANCESTRAL SPECIES	58					ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000159130	ENSGT00950000183036.b	ENSGT00940000155021 #14	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT01090000260395	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00940000175175	ENSGT00830000128645.a	ENSGT00940000153846.a.b	ENSGT00940000156166.b	ENSGT00530000063861.a	ENSGT00940000158914	ENSGT00940000159311.d.a.a	ENSGT00940000159311.c	ENSGT00390000016884	ENSGT00940000162025	ENSGT00940000160045	ENSGT00390000016177
Archelosauria	ANCESTRAL SPECIES	55							ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000159130	ENSGT00950000183036.b	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00940000162790.a	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00390000016884	ENSGT00940000162025	ENSGT00940000160045	ENSGT00390000016177	ENSGT00940000157017.b	ENSGT00390000000976	ENSGT00940000161836	ENSGT00830000128645.a	ENSGT00940000153846.a.b	ENSGT00940000156166.b	ENSGT00530000063861.a	ENSGT00940000158914
Archosauria	ANCESTRAL SPECIES																	ENSGT00940000160234 #22
Aves	ANCESTRAL SPECIES																	ENSGT00940000160234 #22
African ostrich	MODERN SPECIES	608										RASAL3 (ENSSCUG00000009490) #17	ENSSCUG00000009479	AKAP8L (ENSSCUG00000009472) #19	AKAP8 (ENSSCUG00000009464) ##19	ENSSCUG00000009460	ENSSCUG00000009457	ENSSCUG00000009450 #22
Cryptodira	ANCESTRAL SPECIES	66				ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT01030000234575.c.b	ENSGT01100000263519.A.a.a.a.a.a.b.b	ENSGT00940000159130	ENSGT00950000183036.b	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00390000016884	ENSGT00940000162025	ENSGT00940000160045	ENSGT00390000016177	ENSGT00940000157017.b	ENSGT00390000000976	ENSGT00940000161836	ENSGT00830000128645.a	ENSGT00940000153846.a.b	ENSGT00940000156166.b	ENSGT00530000063861.a	ENSGT00940000158914
Testudinoidea	ANCESTRAL SPECIES	49	ENSGT00940000159931.k	ENSGT00390000002307	ENSGT00940000159065	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT01030000234575.c.b	ENSGT01100000263519.A.a.a.a.a.a.b.b.b	ENSGT00940000159130	ENSGT00950000183036.b	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000160234 #22	ENSGT00950000182975.a.b.o	ENSGT00550000075140	ENSGT00390000016884	ENSGT00940000162025	ENSGT00940000160045.e.a.a.b	ENSGT01050000245655	ENSGT00390000000976	ENSGT00940000157017.b	ENSGT00390000016177	ENSGT00940000160045.d	ENSGT00940000161507 #15	ENSGT00940000155021 #14
Testudinidae	ANCESTRAL SPECIES	75						ENSGT00950000183036.b	ENSGT00940000159130	ENSGT01100000263519.A.a.a.a.a.a.b.b.b	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT01100000263552.g.b.b.b.d.a.b	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000160234 #22	ENSGT00950000182975.a.b.o	ENSGT00550000075140	ENSGT00390000016884	ENSGT00940000162025	ENSGT00940000160045.e.a.a.b	ENSGT01050000245655	ENSGT00390000000976	ENSGT00940000157017.b	ENSGT00390000016177	ENSGT00960000187251	ENSGT00940000160045.d	ENSGT00940000161507 #15	ENSGT00940000155021 #14
Goode s thornscrub tortoise	MODERN SPECIES	147	ENSGEVG00005011484	ENSGEVG00005011562	MCOLN1 (ENSGEVG00005011657)	PNPLA6 (ENSGEVG00005011796)	ENSGEVG00005012157	ENSGEVG00005012221	ENSGEVG00005012415	PGLYRP2 (ENSGEVG00005012474) #16	ENSGEVG00005012506 #17	WIZ (ENSGEVG00005012620) #18	AKAP8L (ENSGEVG00005012696) #19	ENSGEVG00005012787	AKAP8 (ENSGEVG00005012840) ##19	BRD4 (ENSGEVG00005012926) #20	ENSGEVG00005013032	NOTCH3 (ENSGEVG00005013212) #22	CAMSAP3 (ENSGEVG00005013524)	XAB2 (ENSGEVG00005013571)	PET100 (ENSGEVG00005013622)	PCP2 (ENSGEVG00005013662)	ENSGEVG00005013874	TRAPPC5 (ENSGEVG00005013921)	KISS1R (ENSGEVG00005013954)	ENSGEVG00005014010	ENSGEVG00005014043	ENSGEVG00005014076	ENSGEVG00005014126 #15	ENSGEVG00005014245 #14	ENSGEVG00005014825 #15	ENSGEVG00005014873	ENSGEVG00005014918
Abingdon island giant tortoise	MODERN SPECIES	497													ENSCABG00000013514	ENSCABG00000013592	ENSCABG00000013594	NOTCH3 (ENSCABG00000013600) #22	ENSCABG00000013621	ENSCABG00000013622	XAB2 (ENSCABG00000013624)	PET100 (ENSCABG00000013626)
Emydidae	ANCESTRAL SPECIES	90	ENSGT00940000154126.h.a	ENSGT00940000159931.k	ENSGT00390000002307	ENSGT00940000162831	ENSGT00940000159065	ENSGT00940000158035 #23	ENSGT01030000234635.a.a.a.b #24	ENSGT00940000159130	ENSGT00950000183036.b	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000160234 #22	ENSGT00950000182975.a.b.o	ENSGT00550000075140	ENSGT00390000016884	ENSGT00940000162025	ENSGT00390000000976
Three-toed box turtle	MODERN SPECIES	926																ENSTMTG00000012844 #22
painted turtle	MODERN SPECIES	1134																NOTCH3 (ENSCPBG00000022710) #22	CAMSAP3 (ENSCPBG00000022720)	ENSCPBG00000022727	XAB2 (ENSCPBG00000022730)	PET100 (ENSCPBG00000022735)	PCP2 (ENSCPBG00000022741)	ENSCPBG00000022743
Lepidosauria	ANCESTRAL SPECIES	78	ENSGT00940000159130	ENSGT00950000183036.b	ENSGT00940000161507 #15	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000160381	ENSGT00940000161157	ENSGT00940000153385.b.a.b	ENSGT00940000162790.a	ENSGT00940000156233	ENSGT00940000164497	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00390000016884	ENSGT00940000162025	ENSGT00940000160045	ENSGT00390000016177	ENSGT00940000157017.b	ENSGT00940000162906.c.a	ENSGT00390000000976	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a
tuatara	MODERN SPECIES	1072				ENSSPUG00000000328	ENSSPUG00000000336	MCOLN1 (ENSSPUG00000000348)	CYP4F22 (ENSSPUG00000000443) #15	PGLYRP2 (ENSSPUG00000000448) #16	ENSSPUG00000000473	RASAL3 (ENSSPUG00000000481) #17	WIZ (ENSSPUG00000000555) #18	AKAP8L (ENSSPUG00000000622) #19	ENSSPUG00000000639	ENSSPUG00000000671	ENSSPUG00000000775	NOTCH3 (ENSSPUG00000000802) #22	ENSSPUG00000001108	XAB2 (ENSSPUG00000001123)	KISS1R (ENSSPUG00000001211)	ENSSPUG00000001227	TRAPPC5 (ENSSPUG00000001231)	ENSSPUG00000001237	TECR (ENSSPUG00000001243)	DNAJB1 (ENSSPUG00000001282)	ENSSPUG00000001295	ENSSPUG00000001299	PTGER1 (ENSSPUG00000001303)
Episquamata	ANCESTRAL SPECIES	4	ENSGT00390000005730.a.a.f	ENSGT00940000161207	ENSGT00940000170754	ENSGT00940000157510	ENSGT00940000155709	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000160381	ENSGT00940000161157	ENSGT00940000153385.b.a.b	ENSGT00940000162790.a	ENSGT00940000156233	ENSGT00940000164497	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00390000016884	ENSGT00940000162025	ENSGT00940000160045	ENSGT00390000016177.a.a	ENSGT00940000157017.b	ENSGT00390000000976	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a	ENSGT00940000166147
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000164189	ENSGT00940000176040	ENSGT00940000154322.C	ENSGT00940000156854	ENSGT00940000154076.C.d	ENSGT00730000111191	ENSGT00390000005730.a.a.f	ENSGT00940000161207	ENSGT00940000157510	ENSGT00940000155709	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000156233.n	ENSGT00940000160234 #22	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00390000016884	ENSGT00940000162025	ENSGT00940000160045	ENSGT00390000016177.a.a	ENSGT00940000157017.b	ENSGT00390000000976	ENSGT00940000162906.c.a	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a	ENSGT00940000166147
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000015887	ENSPMRG00000016255	ELAC2 (ENSPMRG00000017772)	ENSPMRG00000018175	FN3KRP (ENSPMRG00000018180)	RAB40B (ENSPMRG00000018194)	WDR45B (ENSPMRG00000018202)	FOXK2 (ENSPMRG00000018210)	WIZ (ENSPMRG00000018220) #18	AKAP8L (ENSPMRG00000018229) #19	AKAP8 (ENSPMRG00000018235) ##19	ENSPMRG00000018243	ENSPMRG00000018269	ENSPMRG00000018332	ENSPMRG00000018342	NOTCH3 (ENSPMRG00000018759) #22	CAMSAP3 (ENSPMRG00000021035)	XAB2 (ENSPMRG00000021050)	ENSPMRG00000021066	PCP2 (ENSPMRG00000021070)	STXBP2 (ENSPMRG00000021082)	ENSPMRG00000021107	ENSPMRG00000021116	ENSPMRG00000021125	ENSPMRG00000021134	TRAPPC5 (ENSPMRG00000021136)	ENSPMRG00000021143	ENSPMRG00000021150	ENSPMRG00000021156	ENSPMRG00000021158	ENSPMRG00000021163
Argentine black and white tegu	MODERN SPECIES	1	ENSSMRG00000006416	ENSSMRG00000006405	ENSSMRG00000006221	ELAC2 (ENSSMRG00000006166)	FN3KRP (ENSSMRG00000006159)	RAB40B (ENSSMRG00000006156)	WDR45B (ENSSMRG00000006129)	FOXK2 (ENSSMRG00000006126)	WIZ (ENSSMRG00000006116) #18	AKAP8L (ENSSMRG00000005802) #19	ENSSMRG00000005801	AKAP8 (ENSSMRG00000005798) ##19	BRD4 (ENSSMRG00000005217) #20	ENSSMRG00000005212	ENSSMRG00000005200	NOTCH3 (ENSSMRG00000005174) #22	ENSSMRG00000005150	ENSSMRG00000005147	XAB2 (ENSSMRG00000005137)	PET100 (ENSSMRG00000005134)	PCP2 (ENSSMRG00000005124)	STXBP2 (ENSSMRG00000005084)	ENSSMRG00000005077	ENSSMRG00000005070	ENSSMRG00000005061	TRAPPC5 (ENSSMRG00000005055)	ENSSMRG00000005021	ENSSMRG00000005015	TECR (ENSSMRG00000005001)	DNAJB1 (ENSSMRG00000004999)	GIPC1 (ENSSMRG00000004998)
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000154322.C	ENSGT00940000176040	ENSGT00940000156854	ENSGT00940000154076.C.d	ENSGT00940000159717	ENSGT00730000111191	ENSGT00390000005730.a.a.f	ENSGT00940000161207	ENSGT00940000170754	ENSGT00940000157510	ENSGT00940000155709	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000154549.b #20	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00940000175175	ENSGT00940000162025	ENSGT00940000160045	ENSGT00390000016177.b	ENSGT00940000159286.b	ENSGT00390000000976	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a	ENSGT00940000166147
Lizard	MODERN SPECIES	1	ENSACAG00000037929	ENSACAG00000017551	ENSACAG00000017460	ENSACAG00000017398	FN3KRP (ENSACAG00000017373)	ENSACAG00000036150	ENSACAG00000017363	WDR45B (ENSACAG00000017343)	FOXK2 (ENSACAG00000017333)	WIZ (ENSACAG00000017318) #18	AKAP8L (ENSACAG00000017315) #19	AKAP8 (ENSACAG00000017298) ##19	BRD4 (ENSACAG00000017270) #20	ENSACAG00000029367	ENSACAG00000017263	NOTCH3 (ENSACAG00000017220) #22	CAMSAP3 (ENSACAG00000017204)	ENSACAG00000017173	ENSACAG00000042266	ENSACAG00000020942	PCP2 (ENSACAG00000017172)	ENSACAG00000017105	ENSACAG00000036324	ENSACAG00000029691	ENSACAG00000036875	ENSACAG00000038624	ENSACAG00000038481	ENSACAG00000031954	ENSACAG00000041391	NDUFB7 (ENSACAG00000017055)	TECR (ENSACAG00000017027)
Elapidae	ANCESTRAL SPECIES	2	ENSGT00390000002856	ENSGT00940000162720.b.a	ENSGT00940000154322.C	ENSGT00940000176040	ENSGT00940000156854	ENSGT00940000154076.C.d	ENSGT00940000159717	ENSGT00730000111191	ENSGT00390000005730.a.a.f	ENSGT00940000161207	ENSGT00940000157510	ENSGT00940000155709	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00940000175175	ENSGT00940000162025	ENSGT00940000160045	ENSGT00940000159286.b	ENSGT00390000000976	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a	ENSGT00940000166147	ENSGT00390000009916
Indian cobra	DUPLICATION
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	1	ENSNNAG00000011427	ENSNNAG00000011391	ELAC2 (ENSNNAG00000011075)	FN3KRP (ENSNNAG00000010997)	RAB40B (ENSNNAG00000010973)	WDR45B (ENSNNAG00000010923)	FOXK2 (ENSNNAG00000010859)	WIZ (ENSNNAG00000010721) #18	AKAP8L (ENSNNAG00000010673) #19	AKAP8 (ENSNNAG00000010662) ##19	ENSNNAG00000010572	ENSNNAG00000010557	ENSNNAG00000010532	ENSNNAG00000010481 #22	ENSNNAG00000010419 #22	ENSNNAG00000010384 #22	STXBP2 (ENSNNAG00000010318)	ENSNNAG00000010285	ENSNNAG00000010233	ENSNNAG00000010221	ENSNNAG00000010194	ENSNNAG00000010159	ENSNNAG00000010093	TRAPPC5 (ENSNNAG00000010073)	NDUFB7 (ENSNNAG00000010053)	TECR (ENSNNAG00000009971)	DNAJB1 (ENSNNAG00000009949)	ENSNNAG00000009940	PTGER1 (ENSNNAG00000009924)	ENSNNAG00000009879	PKN1 (ENSNNAG00000009574)
Indian cobra	MODERN SPECIES	1	PIRT (ENSNNAG00000011571)	ENSNNAG00000011452	ENSNNAG00000011427	ENSNNAG00000011391	ELAC2 (ENSNNAG00000011075)	FN3KRP (ENSNNAG00000010997)	RAB40B (ENSNNAG00000010973)	WDR45B (ENSNNAG00000010923)	FOXK2 (ENSNNAG00000010859)	WIZ (ENSNNAG00000010721) #18	AKAP8L (ENSNNAG00000010673) #19	AKAP8 (ENSNNAG00000010662) ##19	ENSNNAG00000010572	ENSNNAG00000010557	ENSNNAG00000010532	ENSNNAG00000010481 #22	ENSNNAG00000010419 #22	ENSNNAG00000010384 #22	STXBP2 (ENSNNAG00000010318)	ENSNNAG00000010285	ENSNNAG00000010233	ENSNNAG00000010221	ENSNNAG00000010194	ENSNNAG00000010159	ENSNNAG00000010093	TRAPPC5 (ENSNNAG00000010073)	NDUFB7 (ENSNNAG00000010053)	TECR (ENSNNAG00000009971)	DNAJB1 (ENSNNAG00000009949)	ENSNNAG00000009940	PTGER1 (ENSNNAG00000009924)
Indian cobra	MODERN SPECIES	1	ENSNNAG00000011452	ENSNNAG00000011427	ENSNNAG00000011391	ELAC2 (ENSNNAG00000011075)	FN3KRP (ENSNNAG00000010997)	RAB40B (ENSNNAG00000010973)	WDR45B (ENSNNAG00000010923)	FOXK2 (ENSNNAG00000010859)	WIZ (ENSNNAG00000010721) #18	AKAP8L (ENSNNAG00000010673) #19	AKAP8 (ENSNNAG00000010662) ##19	ENSNNAG00000010572	ENSNNAG00000010557	ENSNNAG00000010532	ENSNNAG00000010481 #22	ENSNNAG00000010419 #22	ENSNNAG00000010384 #22	STXBP2 (ENSNNAG00000010318)	ENSNNAG00000010285	ENSNNAG00000010233	ENSNNAG00000010221	ENSNNAG00000010194	ENSNNAG00000010159	ENSNNAG00000010093	TRAPPC5 (ENSNNAG00000010073)	NDUFB7 (ENSNNAG00000010053)	TECR (ENSNNAG00000009971)	DNAJB1 (ENSNNAG00000009949)	ENSNNAG00000009940	PTGER1 (ENSNNAG00000009924)	ENSNNAG00000009879
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00390000002856	ENSGT00940000154322.C	ENSGT00940000176040	ENSGT00940000156854	ENSGT00940000154076.C.d.v	ENSGT00940000159717	ENSGT00730000111191	ENSGT00390000005730.a.a.f	ENSGT00940000161207	ENSGT00940000157510	ENSGT00940000155709	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00940000175175	ENSGT00940000162025	ENSGT00940000160045	ENSGT00940000159286.b	ENSGT00390000000976	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a	ENSGT00940000166147	ENSGT00390000009916
Blue-lipped sea krait	MODERN SPECIES	1825																NOTCH3 (ENSLLTG00000006454) #22
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00390000002856	ENSGT00940000154322.C	ENSGT00940000176040	ENSGT00940000156854	ENSGT00940000154076.C.d.v	ENSGT00940000159717	ENSGT00730000111191	ENSGT00390000005730.a.a.f	ENSGT00940000161207	ENSGT00940000157510	ENSGT00940000155709	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT00530000063777.a.a.b ##19	ENSGT00940000162790.a	ENSGT00940000160234 #22	ENSGT00980000198723	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00940000175175	ENSGT00940000162025	ENSGT00940000160045	ENSGT00960000187251.a	ENSGT00940000159286.b	ENSGT00390000000976	ENSGT00390000018759	ENSGT00950000182886.a.a.b	ENSGT00940000160312	ENSGT00390000003420.a.a	ENSGT01030000234559.a.a.b.a	ENSGT00940000166147
Eastern brown snake	MODERN SPECIES	6	ENSPTXG00000009475	ENSPTXG00000009476	ENSPTXG00000009477	ENSPTXG00000009478	ELAC2 (ENSPTXG00000009480)	FN3KRP (ENSPTXG00000009684)	RAB40B (ENSPTXG00000009685)	WDR45B (ENSPTXG00000009686)	FOXK2 (ENSPTXG00000009687)	WIZ (ENSPTXG00000009688) #18	AKAP8L (ENSPTXG00000009689) #19	AKAP8 (ENSPTXG00000009690) ##19	ENSPTXG00000009691	ENSPTXG00000003642	ENSPTXG00000003645	NOTCH3 (ENSPTXG00000003651) #22	CAMSAP3 (ENSPTXG00000003657)	XAB2 (ENSPTXG00000003662)	ENSPTXG00000003664	PCP2 (ENSPTXG00000003666)	STXBP2 (ENSPTXG00000003668)	ENSPTXG00000003670	ENSPTXG00000003673	TRAPPC5 (ENSPTXG00000003675)	ENSPTXG00000003678	ENSPTXG00000003679	NDUFB7 (ENSPTXG00000003681)	TECR (ENSPTXG00000003682)	DNAJB1 (ENSPTXG00000003683)	GIPC1 (ENSPTXG00000003684)	PTGER1 (ENSPTXG00000003685)
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	44	UBE2G1 (ENSNSUG00000008032)	SPNS3 (ENSNSUG00000008029)	SPNS2 (ENSNSUG00000008018)	MYBBP1A (ENSNSUG00000008017)	EIF4H (ENSNSUG00000008016)	RFC2 (ENSNSUG00000008003)	CLIP2 (ENSNSUG00000007996)	GTF2IRD1 (ENSNSUG00000007987)	GTF2I (ENSNSUG00000007985)	NCF1 (ENSNSUG00000007984)	RCC1L (ENSNSUG00000007983)	CASTOR2 (ENSNSUG00000007979)	AUTS2 (ENSNSUG00000007971)	GALNT17 (ENSNSUG00000007967)	CALN1 (ENSNSUG00000007965)	ENSNSUG00000007964 #22	WSCD1 (ENSNSUG00000007962)
Mainland tiger snake	DUPLICATION
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	87	ENSNSUG00000018165	ENSNSUG00000018164	ENSNSUG00000018163	ELAC2 (ENSNSUG00000018131)	FN3KRP (ENSNSUG00000018130)	RAB40B (ENSNSUG00000018129)	WDR45B (ENSNSUG00000018120)	FOXK2 (ENSNSUG00000018119)	WIZ (ENSNSUG00000018118) #18	AKAP8L (ENSNSUG00000018117) #19	AKAP8 (ENSNSUG00000018115) ##19	ENSNSUG00000018064	ENSNSUG00000018063	ENSNSUG00000018062 #22	ENSNSUG00000018061 #22	ENSNSUG00000018060 #22	ENSNSUG00000018059	ENSNSUG00000018058	XAB2 (ENSNSUG00000018046)	ENSNSUG00000018041	PCP2 (ENSNSUG00000018039)	STXBP2 (ENSNSUG00000017910)	ENSNSUG00000017906	ENSNSUG00000017889	TRAPPC5 (ENSNSUG00000017888)	NDUFB7 (ENSNSUG00000017887)	TECR (ENSNSUG00000017842)	DNAJB1 (ENSNSUG00000017841)	ENSNSUG00000017840	PTGER1 (ENSNSUG00000017839)	ENSNSUG00000017837
Mainland tiger snake	MODERN SPECIES	87	PIRT (ENSNSUG00000018167)	ENSNSUG00000018166	ENSNSUG00000018165	ENSNSUG00000018164	ENSNSUG00000018163	ELAC2 (ENSNSUG00000018131)	FN3KRP (ENSNSUG00000018130)	RAB40B (ENSNSUG00000018129)	WDR45B (ENSNSUG00000018120)	FOXK2 (ENSNSUG00000018119)	WIZ (ENSNSUG00000018118) #18	AKAP8L (ENSNSUG00000018117) #19	AKAP8 (ENSNSUG00000018115) ##19	ENSNSUG00000018064	ENSNSUG00000018063	ENSNSUG00000018062 #22	ENSNSUG00000018061 #22	ENSNSUG00000018060 #22	ENSNSUG00000018059	ENSNSUG00000018058	XAB2 (ENSNSUG00000018046)	ENSNSUG00000018041	PCP2 (ENSNSUG00000018039)	STXBP2 (ENSNSUG00000017910)	ENSNSUG00000017906	ENSNSUG00000017889	TRAPPC5 (ENSNSUG00000017888)	NDUFB7 (ENSNSUG00000017887)	TECR (ENSNSUG00000017842)	DNAJB1 (ENSNSUG00000017841)	ENSNSUG00000017840
Mainland tiger snake	MODERN SPECIES	87	ENSNSUG00000018166	ENSNSUG00000018165	ENSNSUG00000018164	ENSNSUG00000018163	ELAC2 (ENSNSUG00000018131)	FN3KRP (ENSNSUG00000018130)	RAB40B (ENSNSUG00000018129)	WDR45B (ENSNSUG00000018120)	FOXK2 (ENSNSUG00000018119)	WIZ (ENSNSUG00000018118) #18	AKAP8L (ENSNSUG00000018117) #19	AKAP8 (ENSNSUG00000018115) ##19	ENSNSUG00000018064	ENSNSUG00000018063	ENSNSUG00000018062 #22	ENSNSUG00000018061 #22	ENSNSUG00000018060 #22	ENSNSUG00000018059	ENSNSUG00000018058	XAB2 (ENSNSUG00000018046)	ENSNSUG00000018041	PCP2 (ENSNSUG00000018039)	STXBP2 (ENSNSUG00000017910)	ENSNSUG00000017906	ENSNSUG00000017889	TRAPPC5 (ENSNSUG00000017888)	NDUFB7 (ENSNSUG00000017887)	TECR (ENSNSUG00000017842)	DNAJB1 (ENSNSUG00000017841)	ENSNSUG00000017840	PTGER1 (ENSNSUG00000017839)
Anura	ANCESTRAL SPECIES	128	ENSGT00940000159311.c	ENSGT00940000159311.d.a.a	ENSGT00940000158914	ENSGT00940000153846.a.b	ENSGT00940000162906.b.a	ENSGT01020000230338	ENSGT00940000159130	ENSGT00950000183036.b	ENSGT00940000158718 #16	ENSGT00940000161423 #17	ENSGT00940000159979 #18	ENSGT00530000063777.a.a.a #19	ENSGT01090000260395	ENSGT00530000063777.a.b ##19	ENSGT00940000162790.a	ENSGT00940000160234 #22	ENSGT00950000182975.a.b	ENSGT00550000075140	ENSGT00940000162025	ENSGT00940000160045	ENSGT00390000016884
Frog	MODERN SPECIES	3	ENSXETG00000035049	ENSXETG00000045890	ENSXETG00000035547	ENSXETG00000047892	pnpla7 (ENSXETG00000031537)	pglyrp2 (ENSXETG00000013018) #16	rasal3 (ENSXETG00000013023) #17	ENSXETG00000035198	ENSXETG00000047655	ENSXETG00000044922	wiz (ENSXETG00000040247) #18	akap8l (ENSXETG00000028035) #19	akap8 (ENSXETG00000013036) ##19	brd4 (ENSXETG00000013039)	ephx3 (ENSXETG00000002569)	notch3 (ENSXETG00000002570) #22	camsap3 (ENSXETG00000002610)	xab2 (ENSXETG00000002611)	ENSXETG00000037706	stxbp2 (ENSXETG00000002616)	ENSXETG00000040764	ENSXETG00000036792	ENSXETG00000045841	ENSXETG00000043692	ENSXETG00000036311	ENSXETG00000049025	ENSXETG00000040872	bag4 (ENSXETG00000009003)	lsm1 (ENSXETG00000009004)	grk5 (ENSXETG00000009005)	star (ENSXETG00000009006)
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	6	SMKR1 (ENSLLEG00000029652)	NRF1 (ENSLLEG00000029679)	UBE2H (ENSLLEG00000029719)	ZC3HC1 (ENSLLEG00000029750)	ENSLLEG00000029793	ENSLLEG00000029982	MCOLN1 (ENSLLEG00000030164)	PGLYRP2 (ENSLLEG00000030198) #16	RASAL3 (ENSLLEG00000030225) #17	WIZ (ENSLLEG00000030262) #18	AKAP8L (ENSLLEG00000030326) #19	ENSLLEG00000030372	ENSLLEG00000030385 ##19	ENSLLEG00000030418	ENSLLEG00000030467	ENSLLEG00000030481 #22	ENSLLEG00000030490	ENSLLEG00000030507 #22	ENSLLEG00000030550	ENSLLEG00000030558	XAB2 (ENSLLEG00000030571)	ENSLLEG00000030587	ENSLLEG00000030618	ENSLLEG00000030621	ENSLLEG00000005715	ENSLLEG00000005734	ENSLLEG00000005762	ENSLLEG00000005770	ENSLLEG00000005784	ENSLLEG00000005806	ENSLLEG00000005827
Leishan spiny toad	MODERN SPECIES	6	UBE2H (ENSLLEG00000029719)	ZC3HC1 (ENSLLEG00000029750)	ENSLLEG00000029793	ENSLLEG00000029982	MCOLN1 (ENSLLEG00000030164)	PGLYRP2 (ENSLLEG00000030198) #16	RASAL3 (ENSLLEG00000030225) #17	WIZ (ENSLLEG00000030262) #18	AKAP8L (ENSLLEG00000030326) #19	ENSLLEG00000030372	ENSLLEG00000030385 ##19	ENSLLEG00000030418	ENSLLEG00000030467	ENSLLEG00000030481 #22	ENSLLEG00000030490	ENSLLEG00000030507 #22	ENSLLEG00000030550	ENSLLEG00000030558	XAB2 (ENSLLEG00000030571)	ENSLLEG00000030587	ENSLLEG00000030618	ENSLLEG00000030621	ENSLLEG00000005715	ENSLLEG00000005734	ENSLLEG00000005762	ENSLLEG00000005770	ENSLLEG00000005784	ENSLLEG00000005806	ENSLLEG00000005827	SLC35B4 (ENSLLEG00000005968)	LRGUK (ENSLLEG00000006068)
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	3509																notch3 (ENSLACG00000003294) #22	ENSLACG00000001961
Coelacanth	MODERN SPECIES	427	ENSLACG00000015863	SH2D3A (ENSLACG00000015130)	MAN2B1 (ENSLACG00000014740)	TRMT1 (ENSLACG00000014585)	NACC1 (ENSLACG00000014358)	STX10 (ENSLACG00000014101)	IER2 (ENSLACG00000014052)	CACNA1A (ENSLACG00000011353)	ENSLACG00000009734	WDR83OS (ENSLACG00000009606)	YJU2B (ENSLACG00000009382)	GTF2F1 (ENSLACG00000009109)	PSPN (ENSLACG00000008652)	ALKBH7 (ENSLACG00000008513)	KEAP1 (ENSLACG00000007874)	ENSLACG00000000165 #22
Actinopterygii	ANCESTRAL SPECIES	450										ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000154535.C	ENSGT00940000155412.b	ENSGT00940000160234 #22
Reedfish	MODERN SPECIES	8	gtf2a2 (ENSECRG00000018344)	GCNT3 (ENSECRG00000018327)	cdc37 (ENSECRG00000018208)	TYK2 (ENSECRG00000018110)	raver1 (ENSECRG00000018070)	nr5a5 (ENSECRG00000017711)	ENSECRG00000017476	ENSECRG00000017358	trip10a (ENSECRG00000017283)	SH2D3A (ENSECRG00000017240)	prmt1 (ENSECRG00000017184)	VAV1 (ENSECRG00000017128)	olfm2b (ENSECRG00000017093)	ENSECRG00000022401	ENSECRG00000022394	notch3 (ENSECRG00000022132) #22	galk2 (ENSECRG00000022025)	FGF7 (ENSECRG00000022020)	DTWD1 (ENSECRG00000022015)	ENSECRG00000021989	ATP8B4 (ENSECRG00000021944)	spata5l1 (ENSECRG00000021927)	zgc:153317 (ENSECRG00000021922)	ENSECRG00000021916	slc30a4 (ENSECRG00000021911)	bloc1s6 (ENSECRG00000021900)	sqor (ENSECRG00000021889)	mibp2 (ENSECRG00000021880)	ENSECRG00000021869	SPPL2A (ENSECRG00000021827)	trpm7 (ENSECRG00000021761)
Neopterygii	ANCESTRAL SPECIES	8	ENSGT00940000153391.c.a	ENSGT00940000163377.a.b	ENSGT00390000005065	ENSGT00940000165414	ENSGT00940000160446	ENSGT00940000154615	ENSGT00950000183047.c.a	ENSGT00940000159125	ENSGT00940000154130.a.a.a	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000154535.C	ENSGT00940000155412.b	ENSGT00940000160234 #22
Spotted gar	MODERN SPECIES	672	dnmt1 (ENSLOCG00000007421)	eif3g (ENSLOCG00000007404)	ppan (ENSLOCG00000007381)	ENSLOCG00000007369	ENSLOCG00000007361	ENSLOCG00000007348	ENSLOCG00000007342	mfap4.2 (ENSLOCG00000007333)	trip10a (ENSLOCG00000007300)	ENSLOCG00000007275	VAV1 (ENSLOCG00000007259)	pin1 (ENSLOCG00000007240)	olfm2b (ENSLOCG00000007214)	col5a3a (ENSLOCG00000007166)	RDH8 (ENSLOCG00000007147)	notch3 (ENSLOCG00000007129) #22	GPR108 (ENSLOCG00000007111)	ENSLOCG00000007096	shfl (ENSLOCG00000007081)	ENSLOCG00000007067	ENSLOCG00000007055	nr5a5 (ENSLOCG00000007039)	CAMSAP3 (ENSLOCG00000007022)	XAB2 (ENSLOCG00000006992)	stxbp2 (ENSLOCG00000006977)	ENSLOCG00000006965	pet100 (ENSLOCG00000006954)	KISS1R (ENSLOCG00000006937)	ENSLOCG00000006923	brd4 (ENSLOCG00000006885)	ENSLOCG00000006870
Osteoglossocephalai	ANCESTRAL SPECIES	97	ENSGT00940000159788.a.a	ENSGT00940000175510	ENSGT00940000160550	ENSGT00940000159869	ENSGT00390000013443.c.i	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT01000000214708	ENSGT00940000155412.a.a.a	ENSGT00940000160234 #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919	ENSGT00940000157774	ENSGT00950000183110.a
Osteoglossiformes	ANCESTRAL SPECIES	97											ENSGT00950000183047.c.a	ENSGT00940000159125.r	ENSGT00940000159148	ENSGT00940000154535.A.n	ENSGT00940000155412.a.a.a	ENSGT00940000160234 #22	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000177910	ENSGT00940000160045	ENSGT00390000016884	ENSGT00530000063777.a.a.a.j #19	ENSGT00940000162790.a.u.a.a	ENSGT01050000244941.B.c.a	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919
P. kingsleyae	MODERN SPECIES	19	ENSPKIG00000015690	ENSPKIG00000015658	ENSPKIG00000015592	angptl6 (ENSPKIG00000015533)	ENSPKIG00000015508	eif3g (ENSPKIG00000015491)	ENSPKIG00000015467	s1pr2 (ENSPKIG00000015448)	ENSPKIG00000015436	trip10a (ENSPKIG00000015381)	VAV1 (ENSPKIG00000015343)	olfm2b (ENSPKIG00000015320)	ENSPKIG00000015314	ENSPKIG00000015292	rdh8a (ENSPKIG00000015265)	notch3 (ENSPKIG00000015156) #22	shfl (ENSPKIG00000015097)	ENSPKIG00000015081	nr5a5 (ENSPKIG00000015017)	ENSPKIG00000015061	CAMSAP3 (ENSPKIG00000014950)	xab2 (ENSPKIG00000014874)	ENSPKIG00000014843	ENSPKIG00000014825	ENSPKIG00000014815	ENSPKIG00000014801	ENSPKIG00000014790	stxbp2 (ENSPKIG00000014736)	pet100 (ENSPKIG00000014713)	akap8l (ENSPKIG00000014648) #19	ENSPKIG00000014628
Asian bonytongue	MODERN SPECIES	23	CDC37 (ENSSFOG00015023686)	ENSSFOG00015023692	ENSSFOG00015023700	ENSSFOG00015023708	s1pr2 (ENSSFOG00015023711)	dnmt1 (ENSSFOG00015023715)	EIF3G (ENSSFOG00015023723)	ppan (ENSSFOG00015023726)	ENSSFOG00015023729	ENSSFOG00015023741	trip10a (ENSSFOG00015023746)	VAV1 (ENSSFOG00015032872)	olfm2b (ENSSFOG00015007944)	col5a3a (ENSSFOG00015023766)	rdh8a (ENSSFOG00015023777)	notch3 (ENSSFOG00015023784) #22	shfl (ENSSFOG00015029241)	ENSSFOG00015023812	nr5a5 (ENSSFOG00015023819)	CAMSAP3 (ENSSFOG00015030857)	xab2 (ENSSFOG00015023836)	ENSSFOG00015023842	ENSSFOG00015023843	ENSSFOG00015023847	stxbp2 (ENSSFOG00015023850)	pet100 (ENSSFOG00015023853)	AKAP8L (ENSSFOG00015023854) #19	ENSSFOG00015023857	lpar2b (ENSSFOG00015023863)	pbx4 (ENSSFOG00015024279)	ENSSFOG00015023870
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000160234.a.a #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000160234.a.a #22
Protacanthopterygii	ANCESTRAL SPECIES	5	ENSGT00390000013443.c.i	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.a.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100.f	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00970000195776	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.a.a #22	ENSGT00940000154615.i.b.f	ENSGT00940000165414	ENSGT00390000005065	ENSGT00650000094974.a	ENSGT00940000157744.c	ENSGT00950000183150.a.a.a.d	ENSGT00950000183207.b	ENSGT00950000183098.a.a	ENSGT00390000016335.g	ENSGT00940000166248.b	ENSGT00940000161341.a.b	ENSGT00940000155223.a.a	ENSGT00390000003628.a.b	ENSGT00940000166711	ENSGT00390000004690.a.a
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	193	ENSGT00390000005100.f.a	ENSGT00510000047802	ENSGT00530000064158.d	ENSGT01030000234518.C.a.a	ENSGT00530000064158.c.a	ENSGT00940000160969	ENSGT00530000064158.c.b	ENSGT00940000155091.fb.a	ENSGT00940000159005.c.a.a.e.a.a.b	ENSGT00940000155091.fb.b	ENSGT00940000159005.c.a.a.e.a.a.a.a.a	ENSGT00950000183047.c.a.a.d	ENSGT00940000159148.a.b	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a.a	ENSGT00940000160234.a.a.a.a #22	ENSGT00940000154615.i.b.f	ENSGT00940000165414	ENSGT00390000005065.j	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a.b	ENSGT00940000160234.a.a.b #22	ENSGT00390000005065.i.b
Salmoninae_a	ANCESTRAL SPECIES	102														ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a.b	ENSGT00940000160234.a.a.a.a #22	ENSGT00940000154615.i.b.f	ENSGT00940000165414	ENSGT00390000005065.j	ENSGT00390000005065.i.a	ENSGT00650000094974.a	ENSGT00940000157744.c.c	ENSGT00950000183098.a.a.f	ENSGT00390000016335.g.a	ENSGT00940000166248.b	ENSGT00940000161341.a.b	ENSGT00940000155223.a.a.c	ENSGT00390000003628.a.b.c.a	ENSGT00940000166711.e.b	ENSGT00390000004690.a.a	ENSGT00950000182860.a.a.a.ub.a.c
Salmo	ANCESTRAL SPECIES	53	ENSGT00940000159869.f	ENSGT00390000013443.c.i.a	ENSGT00940000159005.c.a.b.c.b	ENSGT00940000159005.c.a.a.e.a.a.a.a.b.a	ENSGT01050000244887.A.a.a.b.d	ENSGT00390000005100.f.a	ENSGT00510000047802.g	ENSGT01100000263537.b.a.b.f	ENSGT00530000064158.c.b	ENSGT00940000155091.fb.a	ENSGT00940000159005.c.a.a.e.a.a.a.a.a.a	ENSGT00950000183047.c.a.a.d	ENSGT00940000159148.a.b	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a.a	ENSGT00940000160234.a.a.a.a #22	ENSGT00940000154615.i.b.f	ENSGT00940000165414.c.a	ENSGT00390000005065.i.a	ENSGT00650000094974.a	ENSGT00940000157744.c.c	ENSGT00950000183207.b.kb	ENSGT00950000183098.a.a.e.a.a	ENSGT00390000016335.g.a	ENSGT00940000166248.b	ENSGT00940000161341.a.b.h	ENSGT00940000155223.a.a.c	ENSGT00390000003628.a.b.c.a	ENSGT00940000166711.e.b	ENSGT00390000004690.a.a	ENSGT00950000182860.a.a.a.ub.a.d
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	25	TYK2 (ENSSSAG00000062585)	CDC37 (ENSSSAG00000063677)	ENSSSAG00000101791	ENSSSAG00000094904	s1pr2 (ENSSSAG00000110895)	dnmt1 (ENSSSAG00000002838)	eif3g (ENSSSAG00000010991)	P2Y11 (ENSSSAG00000011463)	ppan (ENSSSAG00000011597)	ENSSSAG00000012159	ENSSSAG00000102397	trip10a (ENSSSAG00000038408)	olfm2a (ENSSSAG00000042645)	col5a3a (ENSSSAG00000101086)	rdh8a (ENSSSAG00000042762)	notch3 (ENSSSAG00000042839) #22	ENSSSAG00000045054	ENSSSAG00000084102	shfl (ENSSSAG00000045187)	ENSSSAG00000045330	ENSSSAG00000049408	ENSSSAG00000049432	ENSSSAG00000088950	ENSSSAG00000089017	ENSSSAG00000049607	ENSSSAG00000049719	rl23 (ENSSSAG00000009857)	ENSSSAG00000049931	ENSSSAG00000009785	ENSSSAG00000050012	ENSSSAG00000081056
Atlantic salmon	MODERN SPECIES	22	CDC37 (ENSSSAG00000037947)	ENSSSAG00000063714	ENSSSAG00000094724	s1pr2 (ENSSSAG00000117042)	ENSSSAG00000107004	dnmt1 (ENSSSAG00000042884)	eif3g (ENSSSAG00000042802)	p2ry11 (ENSSSAG00000116010)	ppan (ENSSSAG00000041926)	p2ry11 (ENSSSAG00000118972)	trip10a (ENSSSAG00000014835)	olfm2a (ENSSSAG00000037307)	col5a3a (ENSSSAG00000090709)	ENSSSAG00000091513	rdh8a (ENSSSAG00000093095)	notch3 (ENSSSAG00000017188) #22	ENSSSAG00000110502	ENSSSAG00000098726	ENSSSAG00000016216	shfl (ENSSSAG00000016147)	myst2 (ENSSSAG00000010864)	G6PC1 (ENSSSAG00000010738)	ENSSSAG00000010709	PSME3 (ENSSSAG00000010640)	ENSSSAG00000049502	ENSSSAG00000115602	ENSSSAG00000010264	ENSSSAG00000010003	ENSSSAG00000117166	ENSSSAG00000049829	ENSSSAG00000009824
River trout	MODERN SPECIES		raver1 (ENSSTUG00000007500)	TYK2 (ENSSTUG00000007665)	CDC37 (ENSSTUG00000013583)	ENSSTUG00000013612	ENSSTUG00000013620	s1pr2 (ENSSTUG00000013628)	dnmt1 (ENSSTUG00000013646)	eif3g (ENSSTUG00000013949)	ENSSTUG00000013997	ppan (ENSSTUG00000014001)	ENSSTUG00000014053	ENSSTUG00000014083	ENSSTUG00000015068	ENSSTUG00000015072	rdh8a (ENSSTUG00000015081)	notch3 (ENSSTUG00000015211) #22	MFAP4 (ENSSTUG00000018667)	ENSSTUG00000018685	shfl (ENSSTUG00000018721)	ENSSTUG00000018734	KAT7 (ENSSTUG00000018779)	G6PC1 (ENSSTUG00000020833)	aoc2 (ENSSTUG00000020837)	ENSSTUG00000020843	PSME3 (ENSSTUG00000020913)	ENSSTUG00000020939	ARL4D (ENSSTUG00000020970)	CA10 (ENSSTUG00000020985)	smarce1 (ENSSTUG00000021002)	ENSSTUG00000021098	rpl23 (ENSSTUG00000021106)
Huchen	MODERN SPECIES	1620										col5a3a (ENSHHUG00000043817)	ENSHHUG00000043837	ENSHHUG00000043841	ENSHHUG00000043844	ENSHHUG00000043847	rdh8a (ENSHHUG00000043851)	notch3 (ENSHHUG00000043864) #22	MFAP4 (ENSHHUG00000044128)	ENSHHUG00000044130	shfl (ENSHHUG00000044133)	ENSHHUG00000044139	KAT7 (ENSHHUG00000044141)	ENSHHUG00000044185
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000160234.a.a.a.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000160234.a.a.a.b #22
Salmo	ANCESTRAL SPECIES																	ENSGT00940000160234.a.a.a.b #22
River trout	MODERN SPECIES	25	raver1 (ENSSTUG00000015867)	TYK2 (ENSSTUG00000015939)	CDC37 (ENSSTUG00000016671)	ENSSTUG00000016701	ENSSTUG00000016710	ENSSTUG00000016739	s1pr2 (ENSSTUG00000016749)	dnmt1 (ENSSTUG00000016789)	eif3g (ENSSTUG00000017192)	p2ry11 (ENSSTUG00000017264)	ppan (ENSSTUG00000017288)	angptl6 (ENSSTUG00000017474)	trip10a (ENSSTUG00000017501)	olfm2a (ENSSTUG00000017771)	rdh8a (ENSSTUG00000017789)	notch3 (ENSSTUG00000017994) #22	MFAP4 (ENSSTUG00000022590)	ENSSTUG00000022613	shfl (ENSSTUG00000022646)	ENSSTUG00000022656	ENSSTUG00000022760	G6PC1 (ENSSTUG00000024797)	aoc2 (ENSSTUG00000024810)	PSME3 (ENSSTUG00000024841)	ENSSTUG00000024944	ENSSTUG00000024999	ARL4D (ENSSTUG00000025017)	ENSSTUG00000025045	CA10 (ENSSTUG00000025067)	smarce1 (ENSSTUG00000025323)	ENSSTUG00000025408
Huchen	MODERN SPECIES	1208										col5a3a (ENSHHUG00000031694)	ENSHHUG00000031690	ENSHHUG00000031682	ENSHHUG00000031674	ENSHHUG00000031672	rdh8a (ENSHHUG00000031668)	notch3 (ENSHHUG00000031464) #22	shfl (ENSHHUG00000031437)	ENSHHUG00000031431	ENSHHUG00000031275	G6PC1 (ENSHHUG00000031271)	aoc2 (ENSHHUG00000031259)	PSME3 (ENSHHUG00000031250)	ENSHHUG00000031244	NBR1 (ENSHHUG00000031209)	ENSHHUG00000031200	ARL4D (ENSHHUG00000031195)
Salmoninae	ANCESTRAL SPECIES	193	ENSGT00530000064158.c.b	ENSGT00940000155091.fb.a	ENSGT00940000159005.c.a.a.e.a.a.b	ENSGT00940000155091.fb.b	ENSGT00940000159005.c.a.a.e.a.a.a.a.a	ENSGT00950000183047.c.a.a.d	ENSGT00940000159148.a.b	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a.a	ENSGT00940000160234.a.a.a.a #22	ENSGT00940000154615.i.b.f	ENSGT00940000165414	ENSGT00390000005065.j	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a.b	ENSGT00940000160234.a.a.b #22	ENSGT00390000005065.i.b
Salmoninae_a	ANCESTRAL SPECIES	137	ENSGT01030000234518.C.a.a	ENSGT00530000064158.c.a	ENSGT00940000160969	ENSGT00530000064158.c.b	ENSGT00940000155091.fb.b	ENSGT00940000159005.c.a.a.e.a.a.a.a.a.b	ENSGT00950000183047.c.a.a.c	ENSGT00940000159148.a.a	ENSGT00940000155091.fb.a	ENSGT00940000159005.c.a.a.e.a.a.a.a.a.a	ENSGT00940000159005.c.a.a.e.a.a.b	ENSGT00950000183047.c.a.a.d	ENSGT00940000159148.a.b	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a.a	ENSGT00940000160234.a.a.b #22	ENSGT00390000005065.i.b	ENSGT00940000157744.c.d	ENSGT00950000183150.a.a.a.d	ENSGT00950000183207.b	ENSGT00950000183098.a.a.e.b	ENSGT00390000016335.g.b
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	37	ENSGT00940000159869.f	ENSGT00390000013443.c.i.a	ENSGT00940000159005.c.a.b.c.b	ENSGT00940000159005.c.a.a.e.a.a.a.a.b.b.a.a	ENSGT01050000244887.A.a.a.b.d	ENSGT00390000005100.f.a	ENSGT00510000047802.h.b.a.a	ENSGT01100000263537.b.a.b.f.b	ENSGT00530000064158.c.b	ENSGT00940000155091.fb.b	ENSGT00940000159005.c.a.a.e.a.a.a.a.a.b	ENSGT00950000183047.c.a.a.d	ENSGT00940000159148.a.b	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a.a.d	ENSGT00940000160234.a.a.b.a #22	ENSGT00940000154615.i.b.f.f.a	ENSGT00940000165414	ENSGT00390000005065.j	ENSGT00390000005065.i.a	ENSGT00650000094974.a.c	ENSGT00940000157744.c.c	ENSGT00950000183150.a.a.a.d.c	ENSGT00950000183207.b.mb	ENSGT00950000183098.a.a.f	ENSGT00390000016335.g.a	ENSGT00940000166248.b.e	ENSGT00940000161341.a.b.j	ENSGT00940000155223.a.a.c.a	ENSGT00390000003628.a.b.c.a	ENSGT00940000166711.e.b
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000040007	ENSOMYG00000071425	ENSOMYG00000041679	ENSOMYG00000041686	ENSOMYG00000041696	s1pr2 (ENSOMYG00000041703)	dnmt1 (ENSOMYG00000041796)	eif3g (ENSOMYG00000042301)	ppan (ENSOMYG00000042316)	ENSOMYG00000042329	ENSOMYG00000042341	trip10a (ENSOMYG00000042358)	olfm2a (ENSOMYG00000064443)	ENSOMYG00000068280	rdh8a (ENSOMYG00000042369)	notch3 (ENSOMYG00000042475) #22	ENSOMYG00000042761	ENSOMYG00000042768	shfl (ENSOMYG00000042778)	ENSOMYG00000042788	ENSOMYG00000042870	G6PC1 (ENSOMYG00000043159)	ENSOMYG00000043161	PSME3 (ENSOMYG00000043172)	ENSOMYG00000043185	ENSOMYG00000043194	ENSOMYG00000043197	ENSOMYG00000043218	ENSOMYG00000043245	ENSOMYG00000043288	rl23 (ENSOMYG00000043300)
Oncorhynchus_a	ANCESTRAL SPECIES	46				ENSGT00950000182866.D.d.b.`b.a	ENSGT00530000064449.A.a.i.f.b	ENSGT00390000003354.f	ENSGT00950000183073.a.a.b.f.b	ENSGT00390000005067.a	ENSGT01050000244824.C.e	ENSGT00950000182972.a.b.b	ENSGT01050000244897.a.a.a	ENSGT00940000157645.f.a	ENSGT01030000234530.a.a.a.a.a.a	ENSGT00940000155521.a.a	ENSGT00940000155412.a.a.a.a.d	ENSGT00940000160234.a.a.b.a #22	ENSGT00940000154615.i.b.f.g	ENSGT00530000064262.pc.b.o	ENSGT00530000063652.a.b.f	ENSGT00390000008582.e	ENSGT00940000165110.b.c.b.a.a	ENSGT00940000165110.b.c.b.b	ENSGT00940000153169.B.m.b	ENSGT00940000154445.b	ENSGT00940000154108.a.c.b	ENSGT00940000157357.e.b	ENSGT00940000159674.s	ENSGT00950000183162.a.a.d.f	ENSGT00940000158778.d.d	ENSGT00940000164878.a.m	ENSGT00390000011180
Coho salmon	MODERN SPECIES	1	raver1 (ENSOKIG00005029083)	TYK2 (ENSOKIG00005029215)	CDC37 (ENSOKIG00005031312)	ENSOKIG00005031397	ENSOKIG00005001950	dnmt1 (ENSOKIG00005002092)	eif3g (ENSOKIG00005002268)	ENSOKIG00005002308	ppan (ENSOKIG00005002316)	ENSOKIG00005002335	ENSOKIG00005002343	trip10a (ENSOKIG00005002365)	olfm2a (ENSOKIG00005002391)	col5a3a (ENSOKIG00005002404)	rdh8a (ENSOKIG00005002414)	notch3 (ENSOKIG00005002709) #22	MFAP4 (ENSOKIG00005004410)	ENSOKIG00005004439	shfl (ENSOKIG00005004463)	ENSOKIG00005004473	ENSOKIG00005004596	G6PC1 (ENSOKIG00005005080)	aoc2 (ENSOKIG00005005090)	PSME3 (ENSOKIG00005005101)	NBR1 (ENSOKIG00005005123)	ENSOKIG00005005142	ENSOKIG00005005153	CA10 (ENSOKIG00005005169)	SMARCE1 (ENSOKIG00005005204)	ENSOKIG00005005341	RPL23 (ENSOKIG00005005351)
Oncorhynchus	ANCESTRAL SPECIES	48	ENSGT00940000159005.c.a.b.d	ENSGT00940000159005.c.a.a.e.a.a.a.a.b.b.a.b	ENSGT01050000244887.A.a.a.b.c	ENSGT00390000005100.f.b	ENSGT00510000047802.h.a	ENSGT01030000234518.C.a.a	ENSGT00530000064158.c.a	ENSGT00510000047802.h.b.a.b	ENSGT00530000064158.d	ENSGT00940000155091.fb.a	ENSGT00940000159005.c.a.a.e.a.a.a.a.a.a	ENSGT00950000183047.c.a.a.c.b	ENSGT00950000183047.c.a.a.c.a	ENSGT00940000159148.a.a	ENSGT00940000155412.a.a.a.a.c	ENSGT00940000160234.a.a.b.b #22	ENSGT00940000154615.i.b.f.f.b	ENSGT00390000005065.i.b	ENSGT00650000094974.a.d	ENSGT00940000157744.c.d	ENSGT00950000183150.a.a.a.d.d	ENSGT00950000183207.b.lb	ENSGT00950000183098.a.a.e.b	ENSGT00390000016335.g.b	ENSGT00940000166248.b.f	ENSGT00940000161341.a.b.i	ENSGT00940000155223.a.a.c.b	ENSGT00390000003628.a.b.d	ENSGT00940000166711.e.a	ENSGT00950000182860.a.a.a.ub.a.d	ENSGT01000000215678.b
Oncorhynchus_a	ANCESTRAL SPECIES	44		ENSGT00940000159005.c.a.a.e.a.a.a.a.b.b.a.b	ENSGT00390000005100.f.b	ENSGT00510000047802.h.a	ENSGT01030000234518.C.a.a	ENSGT00530000064158.c.a	ENSGT00530000064158.d	ENSGT00940000155091.fb.a	ENSGT00940000159005.c.a.a.e.a.a.a.a.a.a	ENSGT00950000183047.c.a.a.c.b	ENSGT00940000159005.c.a.a.e.a.a.a.a.a.b	ENSGT00950000183047.c.a.a.d	ENSGT00940000159148.a.b	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a.a.c	ENSGT00940000160234.a.a.b.b #22	ENSGT00940000154615.i.b.f.f.b	ENSGT00390000005065.i.b	ENSGT00650000094974.a.d	ENSGT00940000157744.c.d	ENSGT00950000183150.a.a.a.d.d	ENSGT00950000183207.b.lb	ENSGT00950000183098.a.a.e.b	ENSGT00390000016335.g.b	ENSGT00940000166248.b.f	ENSGT00940000161341.a.b.i	ENSGT00940000155223.a.a.c.b	ENSGT00390000003628.a.b.d	ENSGT00940000166711.e.a	ENSGT00950000182860.a.a.a.ub.a.d	ENSGT01000000215678.b
Coho salmon	MODERN SPECIES	26	CDC37 (ENSOKIG00005032376)	ENSOKIG00005032424	ENSOKIG00005032437	ENSOKIG00005032448	dnmt1 (ENSOKIG00005032606)	eif3g (ENSOKIG00005035630)	p2ry11 (ENSOKIG00005035741)	ppan (ENSOKIG00005035749)	ENSOKIG00005035865	ENSOKIG00005035873	ENSOKIG00005035887	trip10a (ENSOKIG00005035938)	olfm2a (ENSOKIG00005036211)	col5a3a (ENSOKIG00005036232)	rdh8a (ENSOKIG00005036547)	notch3 (ENSOKIG00005001745) #22	shfl (ENSOKIG00005002056)	ENSOKIG00005002083	KAT7 (ENSOKIG00005002277)	G6PC1 (ENSOKIG00005002838)	ENSOKIG00005002934	PSME3 (ENSOKIG00005002942)	NBR1 (ENSOKIG00005002954)	ENSOKIG00005002980	ARL4D (ENSOKIG00005002991)	CA10 (ENSOKIG00005003002)	smarce1 (ENSOKIG00005003065)	ENSOKIG00005003264	rpl23 (ENSOKIG00005003270)	ENSOKIG00005003287	ENSOKIG00005003302
Chinook salmon	MODERN SPECIES	33	tefb (ENSOTSG00005008835)	TOB2 (ENSOTSG00005008834)	aco2 (ENSOTSG00005006356)	polr3h (ENSOTSG00005006327)	CSDC2 (ENSOTSG00005006324)	ENSOTSG00005006322	PMM1 (ENSOTSG00005006321)	ENSOTSG00005006148	ENSOTSG00005006135	pick1 (ENSOTSG00005004418)	ENSOTSG00005004404	ENSOTSG00005004403	ENSOTSG00005004401	ENSOTSG00005004397	CSNK1E (ENSOTSG00005004389)	notch3 (ENSOTSG00005004378) #22	MFAP4 (ENSOTSG00005004375)	shfl (ENSOTSG00005004373)	ENSOTSG00005004371	KAT7 (ENSOTSG00005002632)	G6PC1 (ENSOTSG00005002584)	aoc2 (ENSOTSG00005002580)	PSME3 (ENSOTSG00005002575)	NBR1 (ENSOTSG00005002567)	ENSOTSG00005002563	ARL4D (ENSOTSG00005002561)	CA10 (ENSOTSG00005001975)	smarce1 (ENSOTSG00005001736)	ENSOTSG00005001729	rpl23 (ENSOTSG00005001727)	ENSOTSG00005001721
Rainbow trout	MODERN SPECIES	3	TYK2 (ENSOMYG00000042593)	CDC37 (ENSOMYG00000042535)	ENSOMYG00000042527	ENSOMYG00000042522	s1pr2 (ENSOMYG00000042518)	dnmt1 (ENSOMYG00000042427)	eif3g (ENSOMYG00000042349)	ppan (ENSOMYG00000042317)	ENSOMYG00000042309	ENSOMYG00000042304	trip10a (ENSOMYG00000041677)	olfm2a (ENSOMYG00000041606)	col5a3a (ENSOMYG00000058090)	ENSOMYG00000042364	rdh8a (ENSOMYG00000041589)	notch3 (ENSOMYG00000041258) #22	ENSOMYG00000041175	shfl (ENSOMYG00000041160)	ENSOMYG00000041154	ENSOMYG00000040363	G6PC1 (ENSOMYG00000040021)	ENSOMYG00000039970	PSME3 (ENSOMYG00000039962)	ENSOMYG00000039950	ENSOMYG00000039938	ENSOMYG00000058061	ENSOMYG00000051653	ENSOMYG00000039913	ENSOMYG00000039836	ENSOMYG00000039808	ENSOMYG00000039764
Northern pike	MODERN SPECIES	10	eif3g (ENSELUG00000023699)	p2ry11 (ENSELUG00000023710)	ENSELUG00000025012	ENSELUG00000022253	ENSELUG00000023809	hbb (ENSELUG00000023879)	p2ry11 (ENSELUG00000024129)	ppan (ENSELUG00000024160)	ENSELUG00000024203	ENSELUG00000024268	trip10a (ENSELUG00000024488)	olfm2a (ENSELUG00000024523)	ENSELUG00000024550	ENSELUG00000006138	rdh8a (ENSELUG00000006157)	notch3 (ENSELUG00000006223) #22	MFAP4 (ENSELUG00000001383)	shfl (ENSELUG00000029233)	ENSELUG00000006315	KAT7 (ENSELUG00000006337)	ENSELUG00000006352	G6PC1 (ENSELUG00000028876)	aoc2 (ENSELUG00000028008)	PSME3 (ENSELUG00000006404)	ENSELUG00000006472	ENSELUG00000006495	ARL4D (ENSELUG00000006503)	CA10 (ENSELUG00000006534)	smarce1 (ENSELUG00000006546)	ENSELUG00000006560	rpl23 (ENSELUG00000030205)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000160234.a.b #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000160234.a.b #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000160234.a.b #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000160234.a.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000160234.a.b #22
Electric eel	DUPLICATION
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	278							ENSEEEG00000021612	trip10a (ENSEEEG00000021579)	olfm2a (ENSEEEG00000021574)	col5a3a (ENSEEEG00000021570)	rdh8a (ENSEEEG00000021566)	ENSEEEG00000021565 #22	ENSEEEG00000021564 #22	ENSEEEG00000021563 #22	ENSEEEG00000021562 #22	ENSEEEG00000021559 #22	shfl (ENSEEEG00000021558)	ENSEEEG00000021555	nr5a5 (ENSEEEG00000021138)	ENSEEEG00000021121	xab2 (ENSEEEG00000021116)	ENSEEEG00000021112	stxbp2 (ENSEEEG00000020869)	pet100 (ENSEEEG00000020854)	brd4 (ENSEEEG00000020847)	lpar2a (ENSEEEG00000020789)	pbx4 (ENSEEEG00000020782)	ENSEEEG00000020777	atp13a1 (ENSEEEG00000020422)	ENSEEEG00000020374	ENSEEEG00000020363
Electric eel	MODERN SPECIES	278								ENSEEEG00000021612	trip10a (ENSEEEG00000021579)	olfm2a (ENSEEEG00000021574)	col5a3a (ENSEEEG00000021570)	rdh8a (ENSEEEG00000021566)	ENSEEEG00000021565 #22	ENSEEEG00000021564 #22	ENSEEEG00000021563 #22	ENSEEEG00000021562 #22	ENSEEEG00000021559 #22	shfl (ENSEEEG00000021558)	ENSEEEG00000021555	nr5a5 (ENSEEEG00000021138)	ENSEEEG00000021121	xab2 (ENSEEEG00000021116)	ENSEEEG00000021112	stxbp2 (ENSEEEG00000020869)	pet100 (ENSEEEG00000020854)	brd4 (ENSEEEG00000020847)	lpar2a (ENSEEEG00000020789)	pbx4 (ENSEEEG00000020782)	ENSEEEG00000020777	atp13a1 (ENSEEEG00000020422)	ENSEEEG00000020374
Electric eel	MODERN SPECIES	278									ENSEEEG00000021612	trip10a (ENSEEEG00000021579)	olfm2a (ENSEEEG00000021574)	col5a3a (ENSEEEG00000021570)	rdh8a (ENSEEEG00000021566)	ENSEEEG00000021565 #22	ENSEEEG00000021564 #22	ENSEEEG00000021563 #22	ENSEEEG00000021562 #22	ENSEEEG00000021559 #22	shfl (ENSEEEG00000021558)	ENSEEEG00000021555	nr5a5 (ENSEEEG00000021138)	ENSEEEG00000021121	xab2 (ENSEEEG00000021116)	ENSEEEG00000021112	stxbp2 (ENSEEEG00000020869)	pet100 (ENSEEEG00000020854)	brd4 (ENSEEEG00000020847)	lpar2a (ENSEEEG00000020789)	pbx4 (ENSEEEG00000020782)	ENSEEEG00000020777	atp13a1 (ENSEEEG00000020422)
Euteleosteomorpha	ANCESTRAL SPECIES		ENSGT00390000013443.c.i	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.a.b #22	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919	ENSGT00940000157774	ENSGT00950000183110.a
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000160234.a.b #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000160234.a.b #22
Huchen	MODERN SPECIES	10400																ENSHHUG00000010970 #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000160234.a.b #22
Oncorhynchus	ANCESTRAL SPECIES	706															ENSGT00940000155412.a.a.a.b	ENSGT00940000160234.a.b #22
Oncorhynchus_a	ANCESTRAL SPECIES	828															ENSGT00940000155412.a.a.a.b	ENSGT00940000160234.a.b #22
Chinook salmon	MODERN SPECIES	2973															rdh8a (ENSOTSG00005040506)	notch3 (ENSOTSG00005040500) #22	MFAP4 (ENSOTSG00005040497)	ENSOTSG00005040456	shfl (ENSOTSG00005040454)
Clupeocephala	ANCESTRAL SPECIES	6	ENSGT00940000159869	ENSGT00390000013443.c.i	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.f	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919	ENSGT00940000157774
Otomorpha	ANCESTRAL SPECIES	12	ENSGT00940000159869	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.f	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919
Clupeiformes	ANCESTRAL SPECIES	14	ENSGT00940000160550	ENSGT00940000159869	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.f.d	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.f.c	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919
Denticle herring	MODERN SPECIES	17	ENSDCDG00000026360	ENSDCDG00000026365	ENSDCDG00000003125	ENSDCDG00000003136	COLGALT1 (ENSDCDG00000003179)	ENSDCDG00000003278	ENSDCDG00000003306	ENSDCDG00000003311	atp13a1 (ENSDCDG00000003351)	ENSDCDG00000003481	ENSDCDG00000003551	trip10a (ENSDCDG00000003617)	olfm2a (ENSDCDG00000004471)	col5a3a (ENSDCDG00000004478)	rdh8a (ENSDCDG00000004498)	notch3 (ENSDCDG00000004626) #22	ENSDCDG00000013024	shfl (ENSDCDG00000013035)	ENSDCDG00000013045	nr5a5 (ENSDCDG00000013135)	CAMSAP3 (ENSDCDG00000014904)	xab2 (ENSDCDG00000014923)	ENSDCDG00000016042	stxbp2 (ENSDCDG00000016095)	pet100 (ENSDCDG00000018483)	brd4 (ENSDCDG00000018486)	ENSDCDG00000018489	lpar2a (ENSDCDG00000018494)	pbx4 (ENSDCDG00000018499)	ENSDCDG00000018505	ppan (ENSDCDG00000018512)
Atlantic herring	MODERN SPECIES		ENSCHAG00000015696	ENSCHAG00000015791	ENSCHAG00000015845	ENSCHAG00000015876	s1pr2 (ENSCHAG00000015943)	dnmt1 (ENSCHAG00000015979)	eif3g (ENSCHAG00000016849)	p2ry11 (ENSCHAG00000016964)	ppan (ENSCHAG00000016984)	ENSCHAG00000017048	ENSCHAG00000017059	ENSCHAG00000017085	trip10a (ENSCHAG00000017122)	olfm2a (ENSCHAG00000017623)	rdh8a (ENSCHAG00000018083)	notch3 (ENSCHAG00000018234) #22	ENSCHAG00000021845	shfl (ENSCHAG00000021866)	ENSCHAG00000021872	nr5a5 (ENSCHAG00000021883)	ENSCHAG00000021893	ENSCHAG00000021906	ENSCHAG00000021915	xab2 (ENSCHAG00000021931)	ENSCHAG00000022708	stxbp2 (ENSCHAG00000022800)	ENSCHAG00000024721	pet100 (ENSCHAG00000024728)	brd4 (ENSCHAG00000024736)	ENSCHAG00000024763	lpar2a (ENSCHAG00000024769)
Otophysi	ANCESTRAL SPECIES	66				ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.f.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919
Cyprinoidei	ANCESTRAL SPECIES	46	ENSGT00390000009925.a.k.a	ENSGT00390000008825.a.b	ENSGT00940000163474	ENSGT00950000182979.a.b.b.b.b.i.b	ENSGT00940000159005.c.a.a.f.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	82	ENSGT00950000182979.a.b.b.b.b.i.a.a	ENSGT00940000163663.B.a.b	ENSGT00940000160824.a	ENSGT00940000159005.c.a.a.f.a.g.b.b	ENSGT01050000244887.A.a.a.b.g	ENSGT00390000005100.c	ENSGT00510000047802	ENSGT01030000234518.C.a.a.q.b	ENSGT00530000064158.a.b	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.f.a.g.a.a	ENSGT00950000183047.c.a.a.b	ENSGT00940000159148.a.d	ENSGT00940000154535.A.b	ENSGT00940000155412.a.a.a.c	ENSGT00940000160234.b.a #22	ENSGT00940000165414.e	ENSGT00390000005065.g	ENSGT00940000163377.a.b.b.g	ENSGT00940000153391.c.a.b	ENSGT00950000182975.a.b.a.a.d.b	ENSGT00550000075140.c	ENSGT01060000249275.A	ENSGT00950000182975.a.b.a.a.c	ENSGT00980000198723	ENSGT01060000249829.A	ENSGT00940000160045.u	ENSGT00390000016884	ENSGT00940000162790.a.u.b.d	ENSGT01050000244941.B.c.b.b.b	ENSGT00940000165175.b.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	22	ENSCARG00000036352	actb2 (ENSCARG00000036365)	ENSCARG00000036453	slc29a4a (ENSCARG00000036666)	atp5mf (ENSCARG00000036687)	cpsf4 (ENSCARG00000036711)	bud31 (ENSCARG00000036766)	pdap1b (ENSCARG00000036792)	shmt1 (ENSCARG00000036814)	smcr8a (ENSCARG00000036968)	flii (ENSCARG00000037021)	znf598 (ENSCARG00000038905)	syngr3a (ENSCARG00000038959)	gfer (ENSCARG00000038975)	drg2 (ENSCARG00000039005)	notch3 (ENSCARG00000039235) #22	ENSCARG00000041147	shfl (ENSCARG00000041160)	ENSCARG00000041177	nr5a5 (ENSCARG00000041189)	ENSCARG00000041271	xab2 (ENSCARG00000041328)	ENSCARG00000041990	ENSCARG00000042010	stxbp2 (ENSCARG00000042175)	pet100 (ENSCARG00000045114)	brd4 (ENSCARG00000045157)	pet100 (ENSCARG00000045212)	brd4 (ENSCARG00000045240)	lpar2a (ENSCARG00000045339)	pbx4 (ENSCARG00000045367)
Goldfish	MODERN SPECIES	22														copz2 (ENSCARG00000054730)	rdh8a (ENSCARG00000055042)	notch3 (ENSCARG00000055283) #22	ENSCARG00000058483	shfl (ENSCARG00000058501)	ENSCARG00000058519	nr5a5 (ENSCARG00000058580)	ENSCARG00000058655	xab2 (ENSCARG00000058739)	ENSCARG00000059289	nprl3 (ENSCARG00000059359)	ENSCARG00000059882	rhbdf1a (ENSCARG00000059962)	aanat2 (ENSCARG00000060374)	mgrn1b (ENSCARG00000060462)	ubald1b (ENSCARG00000063111)	ENSCARG00000063123	ENSCARG00000063169
Cyprininae_a	ANCESTRAL SPECIES	121	ENSGT00390000015579.a.a.b.i	ENSGT00390000009925.a.k.a.b	ENSGT00390000008825.a.b.c.b	ENSGT00940000159005.c.a.b.b	ENSGT00940000159005.c.a.a.f.a.g.b.a	ENSGT00940000157696.l	ENSGT00550000075071.v	ENSGT00940000159005.c.a.a.f.a.g.b.b	ENSGT01050000244887.A.a.a.b.g	ENSGT00390000005100.c	ENSGT00940000159005.c.a.a.f.a.g.a.b	ENSGT00950000183047.c.a.a.b	ENSGT00940000159148.a.d	ENSGT00940000154535.A.b	ENSGT00940000155412.a.a.a.c	ENSGT00940000160234.b.a #22	ENSGT00940000165414.e	ENSGT00390000005065.g	ENSGT00940000163377.a.b.b.g	ENSGT00940000153391.c.a.b	ENSGT00950000182975.a.b.a.a.c	ENSGT00980000198723	ENSGT00950000182975.a.b.a.a.d.b	ENSGT00550000075140.c	ENSGT01060000249275.A	ENSGT01060000249829.A	ENSGT00940000160045.u	ENSGT00940000162790.a.u.b.d	ENSGT01050000244941.B.c.b.b.b	ENSGT00940000165175.b.b	ENSGT00390000011347.d
Common carp reference	MODERN SPECIES	3	nprl3 (ENSCCRG00000041960)	rhbdf1a (ENSCCRG00000020348)	aanat2 (ENSCCRG00000055418)	mgrn1b (ENSCCRG00000038733)	ubald1b (ENSCCRG00000081484)	ENSCCRG00000039396	s1pr2 (ENSCCRG00000077946)	dnmt1 (ENSCCRG00000076147)	eif3g (ENSCCRG00000049061)	p2ry11 (ENSCCRG00000045958)	ppan (ENSCCRG00000048674)	trip10a (ENSCCRG00000023717)	olfm2a (ENSCCRG00000035012)	col5a3a (ENSCCRG00000056493)	rdh8a (ENSCCRG00000064016)	notch3 (ENSCCRG00000007386) #22	ENSCCRG00000080606	shfl (ENSCCRG00000016382)	ENSCCRG00000059929	nr5a5 (ENSCCRG00000079891)	ENSCCRG00000016757	xab2 (ENSCCRG00000009891)	ENSCCRG00000009833	stxbp2 (ENSCCRG00000004966)	brd4 (ENSCCRG00000004604)	lpar2a (ENSCCRG00000057306)	pbx4 (ENSCCRG00000066385)	ENSCCRG00000004044	atp13a1 (ENSCCRG00000002247)	ENSCCRG00000016184	ENSCCRG00000002207
Golden-line barbel	MODERN SPECIES	866													olfm2a (ENSSGRG00000041929)	col5a3a (ENSSGRG00000041930)	rdh8a (ENSSGRG00000041933)	notch3 (ENSSGRG00000041935) #22	ENSSGRG00000042228	shfl (ENSSGRG00000042229)	ENSSGRG00000042230	nr5a5 (ENSSGRG00000042231)	ENSSGRG00000042234	ENSSGRG00000042236	xab2 (ENSSGRG00000042255)	ENSSGRG00000042508	stxbp2 (ENSSGRG00000042511)	brd4 (ENSSGRG00000042761)
Cyprininae	ANCESTRAL SPECIES	225	ENSGT00940000156278.qe.a	ENSGT00390000015579.a.a.b.j	ENSGT00390000009925.a.k.a.a	ENSGT00390000008825.a.b.c.a	ENSGT00940000159005.c.a.a.f.a.h.b.a	ENSGT01050000244887.A.a.a.b.h	ENSGT00390000005100.d	ENSGT01030000234518.C.a.a.q.a	ENSGT00530000064158.a.a	ENSGT00940000160969	ENSGT00940000159005.c.a.a.f.a.h.b.b	ENSGT00950000183047.c.a.a.a	ENSGT00940000159148.a.c	ENSGT00940000154535.A.a	ENSGT00940000155412.a.a.a.d	ENSGT00940000160234.b.b #22	ENSGT00940000165414.f	ENSGT00390000005065.h	ENSGT00940000163377.a.b.b.h	ENSGT00940000153391.c.a.a	ENSGT00950000182975.a.b.a.a.d.a	ENSGT00550000075140.d	ENSGT00940000162790.a.u.b.c	ENSGT00940000156233.qb	ENSGT01050000244941.B.c.b.b.a	ENSGT00940000165175.b.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2198																notch3 (ENSCARG00000035150) #22	ENSCARG00000035158	shfl (ENSCARG00000035165)	ENSCARG00000035173	nr5a5 (ENSCARG00000035178)
Goldfish	MODERN SPECIES	2227					s1pr2 (ENSCARG00000044748)	dnmt1 (ENSCARG00000044781)	eif3g (ENSCARG00000045194)	p2ry11 (ENSCARG00000045560)	ppan (ENSCARG00000045672)	angptl6 (ENSCARG00000046544)	ENSCARG00000046586	trip10a (ENSCARG00000046689)	olfm2a (ENSCARG00000046831)	col5a3a (ENSCARG00000046845)	rdh8a (ENSCARG00000047037)	notch3 (ENSCARG00000047126) #22	ENSCARG00000050569	shfl (ENSCARG00000050583)	ENSCARG00000050603	nr5a5 (ENSCARG00000050613)	CAMSAP3 (ENSCARG00000050691)	xab2 (ENSCARG00000050757)	ENSCARG00000051785	ENSCARG00000051826	stxbp2 (ENSCARG00000052054)	ENSCARG00000055960	brd4 (ENSCARG00000056007)	ENSCARG00000056133	lpar2a (ENSCARG00000056141)	pbx4 (ENSCARG00000056159)	ENSCARG00000056211
Cyprininae_a	ANCESTRAL SPECIES	21	ENSGT00390000015579.a.a.b.j	ENSGT00390000009925.a.k.a.a	ENSGT00390000008825.a.b.c.a	ENSGT00940000159005.c.a.a.f.a.h.b.a	ENSGT01050000244887.A.a.a.b.h	ENSGT00390000005100.d	ENSGT00510000047802	ENSGT01030000234518.C.a.a.q.a	ENSGT00530000064158.b	ENSGT00940000160969	ENSGT00940000159005.c.a.a.f.a.h.b.b	ENSGT00950000183047.c.a.a.a	ENSGT00940000159148.a.c	ENSGT00940000154535.A.a	ENSGT00940000155412.a.a.a.d	ENSGT00940000160234.b.b #22	ENSGT00940000165414.f	ENSGT00390000005065.h	ENSGT00940000163377.a.b.b.h	ENSGT00940000153391.c.a.a	ENSGT00950000182975.a.b.a.a.d.a	ENSGT00550000075140.d	ENSGT00940000153773.a.b.jb.a	ENSGT01060000249275.B	ENSGT00940000160045.t	ENSGT00390000016884	ENSGT00940000162790.a.u.b.c	ENSGT00940000156233.qb	ENSGT01050000244941.B.c.b.b.a	ENSGT00940000165175.b.a	ENSGT00390000011347.c
Common carp reference	MODERN SPECIES	1	mpg (ENSCCRG00000073807)	rhbdf1a (ENSCCRG00000038789)	mgrn1b (ENSCCRG00000020308)	ubald1b (ENSCCRG00000063056)	ENSCCRG00000031581	ENSCCRG00000039522	s1pr2 (ENSCCRG00000039524)	dnmt1 (ENSCCRG00000070015)	ppan (ENSCCRG00000077833)	p2ry11 (ENSCCRG00000055706)	ENSCCRG00000047347	trip10a (ENSCCRG00000035073)	olfm2a (ENSCCRG00000024004)	col5a3a (ENSCCRG00000075992)	rdh8a (ENSCCRG00000010483)	notch3 (ENSCCRG00000061516) #22	ENSCCRG00000016799	shfl (ENSCCRG00000016793)	ENSCCRG00000020209	nr5a5 (ENSCCRG00000016771)	ENSCCRG00000079549	xab2 (ENSCCRG00000016737)	ENSCCRG00000072752	ENSCCRG00000076373	ENSCCRG00000016732	stxbp2 (ENSCCRG00000001590)	ENSCCRG00000036646	pet100 (ENSCCRG00000075056)	brd4 (ENSCCRG00000063302)	ENSCCRG00000004555	lpar2a (ENSCCRG00000004426)
Golden-line barbel	MODERN SPECIES	96	mgrn1b (ENSSGRG00000020459)	ubald1b (ENSSGRG00000020460)	ENSSGRG00000020461	s1pr2 (ENSSGRG00000020464)	dnmt1 (ENSSGRG00000020476)	eif3g (ENSSGRG00000020659)	p2ry11 (ENSSGRG00000020728)	ppan (ENSSGRG00000020729)	angptl6 (ENSSGRG00000020730)	ENSSGRG00000020731	ENSSGRG00000020732	trip10a (ENSSGRG00000020737)	olfm2a (ENSSGRG00000020773)	col5a3a (ENSSGRG00000020780)	rdh8a (ENSSGRG00000020832)	notch3 (ENSSGRG00000020848) #22	shfl (ENSSGRG00000022007)	ENSSGRG00000022008	nr5a5 (ENSSGRG00000022011)	ENSSGRG00000022018	ENSSGRG00000022020	xab2 (ENSSGRG00000022038)	ENSSGRG00000022423	ENSSGRG00000022424	ENSSGRG00000022425	stxbp2 (ENSSGRG00000022432)	ENSSGRG00000022785	pet100 (ENSSGRG00000022786)	brd4 (ENSSGRG00000022789)	ENSSGRG00000022792	ENSSGRG00000022794
Zebrafish	MODERN SPECIES	18	ubald1b (ENSDARG00000020976)	ENSDARG00000095312	ENSDARG00000094952	ENSDARG00000076144	s1pr2 (ENSDARG00000036548)	dnmt1 (ENSDARG00000030756)	eif3g (ENSDARG00000016889)	p2ry11 (ENSDARG00000014929)	ppan (ENSDARG00000022232)	angptl6 (ENSDARG00000020265)	si:ch73-208g10.1 (ENSDARG00000079808)	trip10a (ENSDARG00000005679)	olfm2a (ENSDARG00000077847)	col5a3a (ENSDARG00000098294)	rdh8a (ENSDARG00000028048)	notch3 (ENSDARG00000052139) #22	ENSDARG00000016213	shfl (ENSDARG00000052176)	ENSDARG00000075015	nr5a5 (ENSDARG00000039116)	ENSDARG00000059475	xab2 (ENSDARG00000007092)	stxbp2 (ENSDARG00000007603)	pet100 (ENSDARG00000098017)	brd4 (ENSDARG00000078904)	ENSDARG00000078364	lpar2a (ENSDARG00000042338)	pbx4 (ENSDARG00000052150)	ENSDARG00000089922	atp13a1 (ENSDARG00000029931)	ENSDARG00000091754
Characiphysae	ANCESTRAL SPECIES	26	ENSGT00390000014944.b	ENSGT00950000183081.b.i.b	ENSGT00390000004554	ENSGT00940000157768	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.f.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT00940000156233.nb	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919
Channel catfish	MODERN SPECIES	16	p2ry11 (ENSIPUG00000004999)	p2ry11 (ENSIPUG00000005020)	p2ry11 (ENSIPUG00000005031)	p2ry11 (ENSIPUG00000005038)	p2ry11 (ENSIPUG00000005054)	p2ry11 (ENSIPUG00000005063)	ppan (ENSIPUG00000005082)	angptl6 (ENSIPUG00000005166)	ENSIPUG00000005178	ENSIPUG00000005223	ENSIPUG00000005245	trip10 (ENSIPUG00000005322)	olfm2 (ENSIPUG00000005426)	col5a3a (ENSIPUG00000005485)	rdh8a (ENSIPUG00000005635)	notch3 (ENSIPUG00000005680) #22	zgc:109982 (ENSIPUG00000005793)	shfl (ENSIPUG00000005814)	ENSIPUG00000005836	nr5a5 (ENSIPUG00000005850)	camsap3 (ENSIPUG00000005870)	XAB2 (ENSIPUG00000005933)	stxbp2 (ENSIPUG00000006058)	pet100 (ENSIPUG00000006074)	brd4 (ENSIPUG00000006088)	lpar2 (ENSIPUG00000006127)	pbx4 (ENSIPUG00000006148)	ENSIPUG00000006198	atp13a1 (ENSIPUG00000006243)	CHCHD5 (ENSIPUG00000006585)	gmip (ENSIPUG00000006607)
Characiphysae_b	ANCESTRAL SPECIES	17	ENSGT00390000014944.b	ENSGT00950000183081.b.i.b	ENSGT00390000004554	ENSGT00940000157768	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.f.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT00940000156233.nb	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919
Characoidei	ANCESTRAL SPECIES	33	ENSGT00950000183081.b.i.b	ENSGT00390000004554	ENSGT00940000157768	ENSGT00940000159005.c.a.a.f.a.d	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.f.a.c	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT00940000156233.nb	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919
Red-bellied piranha	MODERN SPECIES	76	cfap20 (ENSPNAG00000017241)	OXSM (ENSPNAG00000017214)	ENSPNAG00000017206	s1pr2 (ENSPNAG00000007116)	dnmt1 (ENSPNAG00000017177)	eif3g (ENSPNAG00000017131)	p2ry11 (ENSPNAG00000017081)	ppan (ENSPNAG00000017058)	ENSPNAG00000016998	ENSPNAG00000016993	ENSPNAG00000016969	trip10a (ENSPNAG00000016936)	olfm2a (ENSPNAG00000016730)	col5a3a (ENSPNAG00000016686)	rdh8a (ENSPNAG00000016491)	notch3 (ENSPNAG00000016457) #22	ENSPNAG00000016437	shfl (ENSPNAG00000016415)	ENSPNAG00000016409	nr5a5 (ENSPNAG00000016398)	CAMSAP3 (ENSPNAG00000016367)	xab2 (ENSPNAG00000016303)	ENSPNAG00000016190	stxbp2 (ENSPNAG00000016096)	pet100 (ENSPNAG00000016004)	brd4 (ENSPNAG00000015972)	ENSPNAG00000015913	ENSPNAG00000015900	lpar2a (ENSPNAG00000015883)	pbx4 (ENSPNAG00000015871)	ENSPNAG00000015823
Mexicana tetra	MODERN SPECIES	99	cfap20 (ENSAMXG00000043203)	OXSM (ENSAMXG00000007840)	ENSAMXG00000039099	s1pr2 (ENSAMXG00000039720)	dnmt1 (ENSAMXG00000012182)	eif3g (ENSAMXG00000031139)	p2ry11 (ENSAMXG00000025629)	ppan (ENSAMXG00000032540)	ENSAMXG00000033524	ENSAMXG00000036617	trip10a (ENSAMXG00000031310)	olfm2a (ENSAMXG00000036496)	ENSAMXG00000037909	ENSAMXG00000000029	rdh8a (ENSAMXG00000034196)	notch3 (ENSAMXG00000017646) #22	ENSAMXG00000017635	shfl (ENSAMXG00000030323)	ENSAMXG00000031630	nr5a5 (ENSAMXG00000017630)	ENSAMXG00000040731	ENSAMXG00000030716	xab2 (ENSAMXG00000017600)	stxbp2 (ENSAMXG00000017594)	pet100 (ENSAMXG00000029813)	brd4 (ENSAMXG00000017585)	ENSAMXG00000042505	ENSAMXG00000035247	lpar2a (ENSAMXG00000017570)	pbx4 (ENSAMXG00000017567)	ENSAMXG00000017564
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	278											ENSEEEG00000021612	trip10a (ENSEEEG00000021579)	olfm2a (ENSEEEG00000021574)	col5a3a (ENSEEEG00000021570)	rdh8a (ENSEEEG00000021566)	ENSEEEG00000021565 #22	ENSEEEG00000021564 #22	ENSEEEG00000021563 #22	ENSEEEG00000021562 #22	ENSEEEG00000021559 #22	shfl (ENSEEEG00000021558)	ENSEEEG00000021555	nr5a5 (ENSEEEG00000021138)	ENSEEEG00000021121	xab2 (ENSEEEG00000021116)	ENSEEEG00000021112	stxbp2 (ENSEEEG00000020869)	pet100 (ENSEEEG00000020854)	brd4 (ENSEEEG00000020847)	lpar2a (ENSEEEG00000020789)	pbx4 (ENSEEEG00000020782)
Electric eel	MODERN SPECIES	278										ENSEEEG00000021612	trip10a (ENSEEEG00000021579)	olfm2a (ENSEEEG00000021574)	col5a3a (ENSEEEG00000021570)	rdh8a (ENSEEEG00000021566)	ENSEEEG00000021565 #22	ENSEEEG00000021564 #22	ENSEEEG00000021563 #22	ENSEEEG00000021562 #22	ENSEEEG00000021559 #22	shfl (ENSEEEG00000021558)	ENSEEEG00000021555	nr5a5 (ENSEEEG00000021138)	ENSEEEG00000021121	xab2 (ENSEEEG00000021116)	ENSEEEG00000021112	stxbp2 (ENSEEEG00000020869)	pet100 (ENSEEEG00000020854)	brd4 (ENSEEEG00000020847)	lpar2a (ENSEEEG00000020789)	pbx4 (ENSEEEG00000020782)	ENSEEEG00000020777
Euteleosteomorpha	ANCESTRAL SPECIES	479																ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00390000005065
Acanthomorphata	ANCESTRAL SPECIES	2	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000154615.i.b	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064
Cod	MODERN SPECIES	11	ENSGMOG00000003581	ENSGMOG00000027864	ENSGMOG00000028626	HbB1 (ENSGMOG00000024926)	s1pr2 (ENSGMOG00000019721)	dnmt1 (ENSGMOG00000003491)	eif3g (ENSGMOG00000003469)	p2ry11 (ENSGMOG00000019720)	ppan (ENSGMOG00000003431)	ENSGMOG00000003396	ENSGMOG00000033925	trip10a (ENSGMOG00000014952)	olfm2a (ENSGMOG00000017267)	col5a3a (ENSGMOG00000009072)	rdh8a (ENSGMOG00000009124)	notch3 (ENSGMOG00000009129) #22	ENSGMOG00000035681	ENSGMOG00000027861	ENSGMOG00000025155	ENSGMOG00000027813	ENSGMOG00000036561	ENSGMOG00000009173	ENSGMOG00000034760	nr5a5 (ENSGMOG00000009190)	ENSGMOG00000009210	xab2 (ENSGMOG00000009239)	ENSGMOG00000026648	ENSGMOG00000023457	stxbp2 (ENSGMOG00000009273)	pet100 (ENSGMOG00000025821)	ENSGMOG00000009290
Euacanthomorphacea	ANCESTRAL SPECIES	5	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000154615.i.b	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064
Pinecone sodierfish	MODERN SPECIES	22	ENSMMDG00005000955	ENSMMDG00005000952	ENSMMDG00005000951	s1pr2 (ENSMMDG00005000950)	dnmt1 (ENSMMDG00005000480)	eif3g (ENSMMDG00005000323)	p2ry11 (ENSMMDG00005000316)	ppan (ENSMMDG00005000294)	ENSMMDG00005024161	ENSMMDG00005024157	ENSMMDG00005024154	trip10a (ENSMMDG00005023987)	olfm2a (ENSMMDG00005023973)	col5a3a (ENSMMDG00005023966)	rdh8a (ENSMMDG00005023961)	notch3 (ENSMMDG00005023344) #22	ENSMMDG00005023273	ENSMMDG00005023265	nr5a5 (ENSMMDG00005022833)	CAMSAP3 (ENSMMDG00005022811)	xab2 (ENSMMDG00005022791)	ENSMMDG00005015953	ENSMMDG00005015751	ENSMMDG00005015747	ENSMMDG00005015746	ENSMMDG00005015744	ENSMMDG00005015740	ENSMMDG00005015738	ENSMMDG00005015735	stxbp2 (ENSMMDG00005009422)	pet100 (ENSMMDG00005009288)
Percomorphaceae	ANCESTRAL SPECIES	3	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000154615.i.b	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Tiger tail seahorse	MODERN SPECIES	248	ENSHCOG00000016514	sc:d0202 (ENSHCOG00000016522)	ENSHCOG00000016529	ENSHCOG00000016553	s1pr2 (ENSHCOG00000016560)	dnmt1 (ENSHCOG00000016624)	eif3g (ENSHCOG00000016649)	ppan (ENSHCOG00000016751)	angptl6 (ENSHCOG00000016769)	ENSHCOG00000016779	ENSHCOG00000016793	trip10a (ENSHCOG00000016817)	olfm2a (ENSHCOG00000016835)	ENSHCOG00000016840	rdh8a (ENSHCOG00000016858)	notch3 (ENSHCOG00000017134) #22	ENSHCOG00000017196	PLEKHH3 (ENSHCOG00000017227)	tubg1 (ENSHCOG00000017255)	ENSHCOG00000017301	mlx (ENSHCOG00000017334)	FMNL1 (ENSHCOG00000017387)	ENSHCOG00000017396	SRCIN1 (ENSHCOG00000017466)	wnt9b (ENSHCOG00000017480)	gosr2 (ENSHCOG00000017506)	gpatch8 (ENSHCOG00000017518)	ENSHCOG00000017558	baxa (ENSHCOG00000017572)	arl5c (ENSHCOG00000017576)	cacnb1 (ENSHCOG00000017600)
Percomorphaceae_B	ANCESTRAL SPECIES	2	ENSGT00940000159005.c.a.a.e.b.b	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b	ENSGT01100000263646	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b
Ovalentaria	ANCESTRAL SPECIES	1	ENSGT00940000159005.c.a.a.e.b.b	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b	ENSGT01100000263646	ENSGT00940000164626.b.b.d.t.a.a	ENSGT00990000203721	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884
Atherinomorphae	ANCESTRAL SPECIES	6	ENSGT00940000159005.c.a.a.e.b.b	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b	ENSGT01100000263646	ENSGT00940000164626.b.b.d.t.a.a	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Cyprinodontiformes	ANCESTRAL SPECIES	3	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.d	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b.c.b	ENSGT00940000164626.b.b.d.t.a.b	ENSGT00940000162888.A.a.a.b.d	ENSGT01100000263646	ENSGT00940000164626.b.b.d.t.a.a	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b
Aplocheiloidei	ANCESTRAL SPECIES	7	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.d	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b.c.b	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064
Mangrove rivulus	MODERN SPECIES	122	ENSKMAG00000017252	ENSKMAG00000017240	ENSKMAG00000017231	ENSKMAG00000017208	s1pr2 (ENSKMAG00000017200)	dnmt1 (ENSKMAG00000016648)	eif3g (ENSKMAG00000016570)	p2ry11 (ENSKMAG00000016553)	ppan (ENSKMAG00000016509)	ENSKMAG00000016497	ENSKMAG00000016485	trip10a (ENSKMAG00000016354)	olfm2a (ENSKMAG00000016277)	col5a3a (ENSKMAG00000016148)	rdh8a (ENSKMAG00000016106)	notch3 (ENSKMAG00000015986) #22	ENSKMAG00000015931	nr5a5 (ENSKMAG00000015899)	ENSKMAG00000015850	xab2 (ENSKMAG00000015718)	ENSKMAG00000015683
Turquoise killifish	MODERN SPECIES	1614	ENSNFUG00015006871	ENSNFUG00015006853	ENSNFUG00015006844	s1pr2 (ENSNFUG00015006843)	EIF3G (ENSNFUG00015006209)	p2ry11 (ENSNFUG00015006200)	PPAN (ENSNFUG00015006147)	ENSNFUG00015006055	ENSNFUG00015006007	ENSNFUG00015005993	trip10a (ENSNFUG00015005626)	ENSNFUG00015005575	olfm2a (ENSNFUG00015005557)	COL5A3A (ENSNFUG00015005356)	RDH8A (ENSNFUG00015005286)	NOTCH3 (ENSNFUG00015004871) #22	ENSNFUG00015004743	ENSNFUG00015004717	nr5a5 (ENSNFUG00015004714)	CAMSAP3 (ENSNFUG00015004693)	xab2 (ENSNFUG00015004487)	ENSNFUG00015004414	ENSNFUG00015004411	ENSNFUG00015003794	ENSNFUG00015003709	STXBP2 (ENSNFUG00015003668)	pet100 (ENSNFUG00015003635)	BRD4 (ENSNFUG00015003629)	lpar2a (ENSNFUG00015003626)	PBX4 (ENSNFUG00015003616)	ATP13A (ENSNFUG00015003365)
Cyprinodontoidei	ANCESTRAL SPECIES	18	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.d	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.c.b	ENSGT00940000164626.b.b.d.t.a.b	ENSGT00940000162888.A.a.a.b.d	ENSGT01100000263646	ENSGT00940000164626.b.b.d.t.a.a	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b
Poeciliinae	ANCESTRAL SPECIES	1	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.c.b	ENSGT00940000164626.b.b.d.t.a.b	ENSGT00940000162888.A.a.a.b.d	ENSGT01100000263646	ENSGT00940000164626.b.b.d.t.a.a	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b
Poecilia	ANCESTRAL SPECIES	8	ENSGT00940000159005.c.a.b	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.c.b	ENSGT00940000164626.b.b.d.t.a.b	ENSGT00940000162888.A.a.a.b.d	ENSGT01100000263646	ENSGT00990000203721	ENSGT00940000162888.A.a.a.b.c.a	ENSGT00940000164626.b.b.d.t.a.a	ENSGT01030000234854	ENSGT00940000160045.x	ENSGT00390000016884
NAME_6	ANCESTRAL SPECIES	8	ENSGT00390000013443.c.i	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.c.b	ENSGT00940000162888.A.a.a.b.d	ENSGT01100000263646	ENSGT00940000164626.b.b.d.t.a.a	ENSGT00990000203721	ENSGT00940000162888.A.a.a.b.c.a	ENSGT00940000160045.x	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b
Amazon molly	MODERN SPECIES	365	TYK2 (ENSPFOG00000006605)	CDC37 (ENSPFOG00000006386)	ENSPFOG00000006343	ENSPFOG00000022270	ENSPFOG00000023772	s1pr2 (ENSPFOG00000020965)	dnmt1 (ENSPFOG00000005624)	eif3g (ENSPFOG00000023526)	ppan (ENSPFOG00000005396)	angptl6 (ENSPFOG00000005348)	ENSPFOG00000005292	trip10a (ENSPFOG00000004949)	olfm2a (ENSPFOG00000004850)	col5a3a (ENSPFOG00000003150)	rdh8a (ENSPFOG00000002865)	notch3 (ENSPFOG00000002047) #22	ENSPFOG00000001741	ENSPFOG00000001703	nr5a5 (ENSPFOG00000001645)	CAMSAP3 (ENSPFOG00000001464)	xab2 (ENSPFOG00000001172)	ENSPFOG00000000249
Sailfin molly	MODERN SPECIES	83	ENSPLAG00000021270	ENSPLAG00000021291	ENSPLAG00000021301	ENSPLAG00000021312	s1pr2 (ENSPLAG00000021324)	dnmt1 (ENSPLAG00000021412)	eif3g (ENSPLAG00000021428)	p2ry11 (ENSPLAG00000021437)	ppan (ENSPLAG00000021445)	angptl6 (ENSPLAG00000021468)	ENSPLAG00000021486	trip10a (ENSPLAG00000021545)	olfm2a (ENSPLAG00000021557)	col5a3a (ENSPLAG00000021695)	rdh8a (ENSPLAG00000021704)	notch3 (ENSPLAG00000000464) #22	ENSPLAG00000021817	ENSPLAG00000021979	nr5a5 (ENSPLAG00000022011)	CAMSAP3 (ENSPLAG00000022031)	xab2 (ENSPLAG00000022087)	ENSPLAG00000022136	ENSPLAG00000022146	ENSPLAG00000022157	ENSPLAG00000022178	ENSPLAG00000022193	ENSPLAG00000022272	ENSPLAG00000022289
Guppy	MODERN SPECIES	460	ENSPREG00000006743	ENSPREG00000006735	ENSPREG00000006725	ENSPREG00000006656	dnmt1 (ENSPREG00000006493)	eif3g (ENSPREG00000006361)	p2ry11 (ENSPREG00000006343)	ppan (ENSPREG00000006330)	ENSPREG00000006308	ENSPREG00000006295	trip10a (ENSPREG00000006251)	olfm2a (ENSPREG00000006223)	ENSPREG00000006191	ENSPREG00000006178	rdh8a (ENSPREG00000006168)	notch3 (ENSPREG00000006129) #22	ENSPREG00000006103	ENSPREG00000006090	nr5a5 (ENSPREG00000006059)	CAMSAP3 (ENSPREG00000006022)	ENSPREG00000005983	ENSPREG00000005963	ENSPREG00000005938	xab2 (ENSPREG00000005889)	ENSPREG00000005768	ENSPREG00000005731	ENSPREG00000005695	stxbp2 (ENSPREG00000005600)	ENSPREG00000005563	brd4 (ENSPREG00000005463)	lpar2a (ENSPREG00000005309)
Platyfish	MODERN SPECIES	7	ENSXMAG00000027224	ENSXMAG00000023644	ENSXMAG00000023427	ENSXMAG00000022484	s1pr2 (ENSXMAG00000019951)	dnmt1 (ENSXMAG00000018063)	eif3g (ENSXMAG00000018061)	p2ry11 (ENSXMAG00000018059)	ppan (ENSXMAG00000028708)	ENSXMAG00000018050	ENSXMAG00000018047	trip10a (ENSXMAG00000018020)	olfm2a (ENSXMAG00000023951)	col5a3a (ENSXMAG00000017753)	rdh8a (ENSXMAG00000017749)	notch3 (ENSXMAG00000002362) #22	ENSXMAG00000002410	ENSXMAG00000002419	nr5a5 (ENSXMAG00000002420)	CAMSAP3 (ENSXMAG00000002431)	xab2 (ENSXMAG00000004199)	ENSXMAG00000004051	ENSXMAG00000029126	ENSXMAG00000022216	ENSXMAG00000004196	ENSXMAG00000000743	ENSXMAG00000026066	stxbp2 (ENSXMAG00000013455)	ENSXMAG00000029520	pet100 (ENSXMAG00000023961)	brd4 (ENSXMAG00000013430)
NAME_4	ANCESTRAL SPECIES	3	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.d	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.c.b	ENSGT00940000164626.b.b.d.t.a.b	ENSGT00940000162888.A.a.a.b.d	ENSGT00940000164626.b.b.d.t.a.a	ENSGT00940000162888.A.a.a.b.c.a.a	ENSGT00990000203721	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b
Sheepshead minnow	MODERN SPECIES	180	ENSCVAG00000013716	ENSCVAG00000013695	ENSCVAG00000013655	ENSCVAG00000013641	s1pr2 (ENSCVAG00000013621)	dnmt1 (ENSCVAG00000013611)	eif3g (ENSCVAG00000013580)	p2ry11 (ENSCVAG00000013550)	ppan (ENSCVAG00000013547)	angptl6 (ENSCVAG00000013541)	ENSCVAG00000013533	trip10a (ENSCVAG00000013519)	olfm2a (ENSCVAG00000013391)	col5a3a (ENSCVAG00000013358)	rdh8a (ENSCVAG00000012962)	notch3 (ENSCVAG00000012928) #22	ENSCVAG00000012778	ENSCVAG00000012695	nr5a5 (ENSCVAG00000012684)	ENSCVAG00000012662	xab2 (ENSCVAG00000012648)	ENSCVAG00000012581	ENSCVAG00000012523	ENSCVAG00000012511	ENSCVAG00000012472	ENSCVAG00000012462	ENSCVAG00000012409	ENSCVAG00000012318
Mummichog	MODERN SPECIES	2407	ENSFHEG00000001628	ENSFHEG00000001621	ENSFHEG00000000053	ENSFHEG00000001610	s1pr2 (ENSFHEG00000001604)	dnmt1 (ENSFHEG00000001593)	eif3g (ENSFHEG00000001569)	p2ry11 (ENSFHEG00000001560)	ppan (ENSFHEG00000001554)	angptl6 (ENSFHEG00000001545)	ENSFHEG00000001534	trip10a (ENSFHEG00000001521)	olfm2a (ENSFHEG00000001502)	col5a3a (ENSFHEG00000001488)	rdh8a (ENSFHEG00000001459)	notch3 (ENSFHEG00000001455) #22	ENSFHEG00000001448	ENSFHEG00000001446	nr5a5 (ENSFHEG00000001440)	CAMSAP3 (ENSFHEG00000001436)	xab2 (ENSFHEG00000001432)
Oryzias	ANCESTRAL SPECIES		ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b.e.a	ENSGT01100000263646	ENSGT00940000162888.A.a.a.b.f	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Oryzias_b	ANCESTRAL SPECIES	11	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b.e.a	ENSGT01100000263646	ENSGT00940000162888.A.a.a.b.f	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Indian medaka	MODERN SPECIES	9	ENSOMEG00000023951	ENSOMEG00000023950	ENSOMEG00000023949	ENSOMEG00000023948	s1pr2 (ENSOMEG00000023947)	dnmt1 (ENSOMEG00000023946)	eif3g (ENSOMEG00000023945)	p2ry11 (ENSOMEG00000023944)	ppan (ENSOMEG00000023943)	angptl6 (ENSOMEG00000023942)	ENSOMEG00000023941	trip10a (ENSOMEG00000023940)	olfm2a (ENSOMEG00000023939)	col5a3a (ENSOMEG00000023938)	rdh8a (ENSOMEG00000023937)	notch3 (ENSOMEG00000023936) #22	ENSOMEG00000023935	ENSOMEG00000023934	nr5a5 (ENSOMEG00000023933)	CAMSAP3 (ENSOMEG00000023932)	xab2 (ENSOMEG00000023931)	ENSOMEG00000023930	ENSOMEG00000023929	ENSOMEG00000023928	ENSOMEG00000023927	ENSOMEG00000023926	ENSOMEG00000002870	ENSOMEG00000005322	ENSOMEG00000005346	stxbp2 (ENSOMEG00000005369)	pet100 (ENSOMEG00000005386)
Javanese ricefish	MODERN SPECIES	22	ENSOJAG00000020814	ENSOJAG00000020807	ENSOJAG00000020780	ENSOJAG00000020727	s1pr2 (ENSOJAG00000020715)	EIF3G (ENSOJAG00000019618)	p2ry11 (ENSOJAG00000019607)	ppan (ENSOJAG00000019530)	angptl6 (ENSOJAG00000019503)	ENSOJAG00000019451	trip10a (ENSOJAG00000017809)	ENSOJAG00000017588	olfm2a (ENSOJAG00000017567)	ENSOJAG00000017331	rdh8a (ENSOJAG00000017306)	notch3 (ENSOJAG00000015955) #22	ENSOJAG00000015923	ENSOJAG00000015918	nr5a5 (ENSOJAG00000015910)	CAMSAP3 (ENSOJAG00000015896)	xab2 (ENSOJAG00000015332)	ENSOJAG00000015288	ENSOJAG00000015069	ENSOJAG00000013297	ENSOJAG00000013188	ENSOJAG00000011536	ENSOJAG00000011475	stxbp2 (ENSOJAG00000011272)	pet100 (ENSOJAG00000011234)	lpar2a (ENSOJAG00000011093)	pbx4 (ENSOJAG00000011038)
Oryzias_a	ANCESTRAL SPECIES	10	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.f	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919	ENSGT00940000157774
Chinese medaka	MODERN SPECIES	837	CDC37 (ENSOSIG00000007689)	ENSOSIG00000007687	ENSOSIG00000007685	ENSOSIG00000007681	s1pr2 (ENSOSIG00000007678)	dnmt1 (ENSOSIG00000007652)	eif3g (ENSOSIG00000007646)	p2ry11 (ENSOSIG00000007642)	ppan (ENSOSIG00000007610)	angptl6 (ENSOSIG00000007609)	ENSOSIG00000007608	trip10a (ENSOSIG00000004457)	olfm2a (ENSOSIG00000019329)	col5a3a (ENSOSIG00000019325)	rdh8a (ENSOSIG00000019316)	notch3 (ENSOSIG00000014381) #22	RDH8 (ENSOSIG00000014342)	ENSOSIG00000014341	nr5a5 (ENSOSIG00000014340)	ENSOSIG00000014339	xab2 (ENSOSIG00000013549)	ENSOSIG00000013542
Japanese Medaka HdrR	MODERN SPECIES	22	ENSORLG00000024653	ENSORLG00000005550	ENSORLG00000028927	ENSORLG00000022189	s1pr2 (ENSORLG00000005560)	dnmt1 (ENSORLG00000005582)	EIF3G (ENSORLG00000005601)	p2ry11 (ENSORLG00000005606)	ppan (ENSORLG00000005634)	angptl6 (ENSORLG00000005649)	ENSORLG00000023894	trip10a (ENSORLG00000005760)	olfm2a (ENSORLG00000005795)	ENSORLG00000005829	rdh8a (ENSORLG00000005853)	notch3 (ENSORLG00000005980) #22	RDH8 (ENSORLG00000005996)	soul5 (ENSORLG00000006007)	nr5a5 (ENSORLG00000006019)	CAMSAP3 (ENSORLG00000006040)	xab2 (ENSORLG00000006076)	ENSORLG00000025497	ENSORLG00000028661	ENSORLG00000024781	ENSORLG00000027133	ENSORLG00000023737	ENSORLG00000026987	ENSORLG00000025701	ENSORLG00000023195	ENSORLG00000028602	ENSORLG00000004040
Ovalentaria_B	ANCESTRAL SPECIES		ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT00990000203721	ENSGT01100000263646	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b
Pomacentridae	ANCESTRAL SPECIES	38	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263646	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347
Pomacentridae_A	ANCESTRAL SPECIES	30	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a.c	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263646	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064
Amphiprion	ANCESTRAL SPECIES	23	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a.c	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.j.b	ENSGT01100000263646	ENSGT00940000162888.A.a.a.b.j.a.a	ENSGT00940000162888.A.a.a.b.j.a.b.a	ENSGT00940000162888.A.a.a.b.j.a.b.b	ENSGT00940000162888.A.a.a.b.k	ENSGT00940000162888.A.a.b	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b
Orange clownfish	MODERN SPECIES	5	ENSAPEG00000010719	ENSAPEG00000010711	ENSAPEG00000010703	ENSAPEG00000010691	s1pr2 (ENSAPEG00000010685)	dnmt1 (ENSAPEG00000010505)	eif3g (ENSAPEG00000010475)	p2ry11 (ENSAPEG00000010439)	ppan (ENSAPEG00000010382)	angptl6 (ENSAPEG00000010369)	ENSAPEG00000010361	trip10a (ENSAPEG00000010345)	olfm2a (ENSAPEG00000010307)	col5a3a (ENSAPEG00000010092)	rdh8a (ENSAPEG00000010052)	notch3 (ENSAPEG00000010014) #22	RDH8 (ENSAPEG00000009979)	ENSAPEG00000009938	nr5a5 (ENSAPEG00000009907)	CAMSAP3 (ENSAPEG00000009819)	xab2 (ENSAPEG00000009722)	ENSAPEG00000008236	ENSAPEG00000008047	ENSAPEG00000007951	ENSAPEG00000007837	ENSAPEG00000007720	ENSAPEG00000007571	ENSAPEG00000007544	ENSAPEG00000007526	stxbp2 (ENSAPEG00000007436)	pet100 (ENSAPEG00000007415)
Clown anemonefish	MODERN SPECIES	1448	ENSAOCG00000005210	ENSAOCG00000005216	ENSAOCG00000005225	s1pr2 (ENSAOCG00000000221)	dnmt1 (ENSAOCG00000005339)	eif3g (ENSAOCG00000005376)	p2ry11 (ENSAOCG00000005394)	ppan (ENSAOCG00000005416)	angptl6 (ENSAOCG00000005432)	ENSAOCG00000005442	trip10a (ENSAOCG00000005503)	olfm2a (ENSAOCG00000005527)	ENSAOCG00000005581	ENSAOCG00000005599	rdh8a (ENSAOCG00000005625)	notch3 (ENSAOCG00000006028) #22
Spiny chromis	MODERN SPECIES	1452													ENSAPOG00000001093	ENSAPOG00000009456	rdh8a (ENSAPOG00000009433)	notch3 (ENSAPOG00000009362) #22	RDH8 (ENSAPOG00000009143)
Bicolor damselfish	MODERN SPECIES	533	ENSSPAG00000000552	ENSSPAG00000000546	ENSSPAG00000000538	ENSSPAG00000000516	s1pr2 (ENSSPAG00000000493)	dnmt1 (ENSSPAG00000000468)	eif3g (ENSSPAG00000000227)	p2ry11 (ENSSPAG00000000205)	ppan (ENSSPAG00000000160)	angptl6 (ENSSPAG00000022867)	ENSSPAG00000022856	trip10a (ENSSPAG00000022830)	olfm2a (ENSSPAG00000022814)	col5a3a (ENSSPAG00000022776)	rdh8a (ENSSPAG00000022772)	notch3 (ENSSPAG00000022755) #22	ENSSPAG00000022749
Cichlidae	ANCESTRAL SPECIES	16	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.n.b.b	ENSGT00940000162888.A.a.a.b.o	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	DUPLICATION
Midas cichlid	MODERN SPECIES	300	ENSACIG00000008610	s1pr2 (ENSACIG00000008591)	dnmt1 (ENSACIG00000007700)	ENSACIG00000007649	eif3g (ENSACIG00000007489)	p2ry11 (ENSACIG00000007471)	ppan (ENSACIG00000007417)	angptl6 (ENSACIG00000007395)	ENSACIG00000007384	trip10a (ENSACIG00000007355)	olfm2a (ENSACIG00000007331)	col5a3a (ENSACIG00000007179)	rdh8a (ENSACIG00000007156)	ENSACIG00000007139 #22	ENSACIG00000007123 #22	ENSACIG00000007092 #22	ENSACIG00000007077 #22	RDH8 (ENSACIG00000007060)	ENSACIG00000007036	nr5a5 (ENSACIG00000007017)	CAMSAP3 (ENSACIG00000006919)	xab2 (ENSACIG00000006860)	ENSACIG00000006814	ENSACIG00000006789
Midas cichlid	MODERN SPECIES	300	s1pr2 (ENSACIG00000008591)	dnmt1 (ENSACIG00000007700)	ENSACIG00000007649	eif3g (ENSACIG00000007489)	p2ry11 (ENSACIG00000007471)	ppan (ENSACIG00000007417)	angptl6 (ENSACIG00000007395)	ENSACIG00000007384	trip10a (ENSACIG00000007355)	olfm2a (ENSACIG00000007331)	col5a3a (ENSACIG00000007179)	rdh8a (ENSACIG00000007156)	ENSACIG00000007139 #22	ENSACIG00000007123 #22	ENSACIG00000007092 #22	ENSACIG00000007077 #22	RDH8 (ENSACIG00000007060)	ENSACIG00000007036	nr5a5 (ENSACIG00000007017)	CAMSAP3 (ENSACIG00000006919)	xab2 (ENSACIG00000006860)	ENSACIG00000006814	ENSACIG00000006789
Midas cichlid	MODERN SPECIES	300	ENSACIG00000008733	ENSACIG00000008610	s1pr2 (ENSACIG00000008591)	dnmt1 (ENSACIG00000007700)	ENSACIG00000007649	eif3g (ENSACIG00000007489)	p2ry11 (ENSACIG00000007471)	ppan (ENSACIG00000007417)	angptl6 (ENSACIG00000007395)	ENSACIG00000007384	trip10a (ENSACIG00000007355)	olfm2a (ENSACIG00000007331)	col5a3a (ENSACIG00000007179)	rdh8a (ENSACIG00000007156)	ENSACIG00000007139 #22	ENSACIG00000007123 #22	ENSACIG00000007092 #22	ENSACIG00000007077 #22	RDH8 (ENSACIG00000007060)	ENSACIG00000007036	nr5a5 (ENSACIG00000007017)	CAMSAP3 (ENSACIG00000006919)	xab2 (ENSACIG00000006860)	ENSACIG00000006814	ENSACIG00000006789
Midas cichlid	MODERN SPECIES	300	ENSACIG00000008744	ENSACIG00000008733	ENSACIG00000008610	s1pr2 (ENSACIG00000008591)	dnmt1 (ENSACIG00000007700)	ENSACIG00000007649	eif3g (ENSACIG00000007489)	p2ry11 (ENSACIG00000007471)	ppan (ENSACIG00000007417)	angptl6 (ENSACIG00000007395)	ENSACIG00000007384	trip10a (ENSACIG00000007355)	olfm2a (ENSACIG00000007331)	col5a3a (ENSACIG00000007179)	rdh8a (ENSACIG00000007156)	ENSACIG00000007139 #22	ENSACIG00000007123 #22	ENSACIG00000007092 #22	ENSACIG00000007077 #22	RDH8 (ENSACIG00000007060)	ENSACIG00000007036	nr5a5 (ENSACIG00000007017)	CAMSAP3 (ENSACIG00000006919)	xab2 (ENSACIG00000006860)	ENSACIG00000006814	ENSACIG00000006789
Pseudocrenilabrinae	ANCESTRAL SPECIES	1	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00940000159005.c.a.a.e.b.b.a	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a.e.b	ENSGT00940000159005.c.a.a.e.b.a.e.a	ENSGT00940000159005.c.a.a.e.b.a.f	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.n.b.b	ENSGT00940000162888.A.a.a.b.o	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	12	ENSGT00390000005100	ENSGT00940000159005.c.a.a.e.b.b.a.c	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a.e.b	ENSGT00940000159005.c.a.a.e.b.a.e.a	ENSGT00940000159005.c.a.a.e.b.a.f.a.b	ENSGT00940000159005.c.a.a.e.b.a.f.b	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.n.b.b	ENSGT01030000234854	ENSGT00940000162888.A.a.a.b.n.b.a.a.a	ENSGT00990000203721	ENSGT00940000162888.A.a.a.b.n.b.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b
Haplochromini	ANCESTRAL SPECIES	12	ENSGT00940000159005.c.a.a.e.b.b.a.c	ENSGT00940000159005.c.a.a.e.b.b.a.d	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a.e.b	ENSGT00940000159005.c.a.a.e.b.a.f.a.a	ENSGT00940000159005.c.a.a.e.b.a.f.a.b	ENSGT00940000159005.c.a.a.e.b.a.f.b	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.n.b.b	ENSGT00940000162888.A.a.a.b.o	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Haplochromini_A	ANCESTRAL SPECIES	14	ENSGT00940000159005.c.a.a.e.b.b.a.d	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a.e.b	ENSGT00940000159005.c.a.a.e.b.a.f.a.a	ENSGT00940000159005.c.a.a.e.b.a.f.a.b	ENSGT00940000159005.c.a.a.e.b.a.f.b	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000182477	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.n.b.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347
Haplochromini_B	ANCESTRAL SPECIES	21	ENSGT00940000159005.c.a.a.e.b.b.a.d	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a.e.b	ENSGT00940000159005.c.a.a.e.b.a.f.a.a	ENSGT00940000159005.c.a.a.e.b.a.f.a.b	ENSGT00940000159005.c.a.a.e.b.a.f.b	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000182477	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.n.b.b	ENSGT00940000162888.A.a.a.b.n.b.a.a.a	ENSGT00940000162888.A.a.a.b.n.b.a.a.b.c.b	ENSGT00940000162888.A.a.a.b.n.b.a.a.b.d.b	ENSGT00990000203721	ENSGT00940000162888.A.a.a.b.n.b.a.a.b.c.a	ENSGT00940000162888.A.a.a.b.n.b.a.a.b.d.a	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854
Eastern happy	MODERN SPECIES	16	ENSACLG00000019162	ENSACLG00000019169	eif3g (ENSACLG00000019184)	p2ry11 (ENSACLG00000019204)	ppan (ENSACLG00000019215)	ENSACLG00000019295	ENSACLG00000019321	ENSACLG00000019411	ENSACLG00000019420	ENSACLG00000019427	ENSACLG00000019455	trip10a (ENSACLG00000019473)	olfm2a (ENSACLG00000019662)	col5a3a (ENSACLG00000019700)	rdh8a (ENSACLG00000019868)	notch3 (ENSACLG00000019952) #22	ENSACLG00000020206	ENSACLG00000020220	nr5a5 (ENSACLG00000020236)	ENSACLG00000020288	ENSACLG00000020297	xab2 (ENSACLG00000020320)	ENSACLG00000020418	ENSACLG00000020517	ENSACLG00000020630	ENSACLG00000020761	ENSACLG00000020845	ENSACLG00000020857	ENSACLG00000020971	ENSACLG00000020986	stxbp2 (ENSACLG00000021008)
Zebra mbuna	MODERN SPECIES	1107	ENSMZEG00005018903	ENSMZEG00005018897	eif3g (ENSMZEG00005018891)	p2ry11 (ENSMZEG00005018887)	ppan (ENSMZEG00005018872)	ENSMZEG00005018858	ENSMZEG00005018831	ENSMZEG00005018786	ENSMZEG00005018772	trip10a (ENSMZEG00005018747)	olfm2a (ENSMZEG00005018729)	ENSMZEG00005018720	ENSMZEG00005018712	ENSMZEG00005018705	rdh8a (ENSMZEG00005018700)	notch3 (ENSMZEG00005018681) #22	ENSMZEG00005018666	ENSMZEG00005018659	nr5a5 (ENSMZEG00005018652)	CAMSAP3 (ENSMZEG00005018643)	xab2 (ENSMZEG00005018631)	ENSMZEG00005018623	ENSMZEG00005018608	ENSMZEG00005018599	ENSMZEG00005014630	ENSMZEG00005014244	ENSMZEG00005014197	ENSMZEG00005014159	ENSMZEG00005014139	ENSMZEG00005014131	stxbp2 (ENSMZEG00005014113)
P. nyererei	MODERN SPECIES	553	dnmt1 (ENSPNYG00000013676)	ENSPNYG00000013782	eif3g (ENSPNYG00000013796)	p2ry11 (ENSPNYG00000013850)	ppan (ENSPNYG00000013872)	ENSPNYG00000013910	ENSPNYG00000013931	ENSPNYG00000013982	trip10a (ENSPNYG00000014060)	olfm2a (ENSPNYG00000014131)	ENSPNYG00000014151	ENSPNYG00000014184	ENSPNYG00000014215	ENSPNYG00000014231	rdh8a (ENSPNYG00000014249)	notch3 (ENSPNYG00000014320) #22	ENSPNYG00000014445	ENSPNYG00000014465	nr5a5 (ENSPNYG00000014487)	ENSPNYG00000014517	xab2 (ENSPNYG00000014537)	ENSPNYG00000014587
Burton s mouthbrooder	MODERN SPECIES	545	ENSHBUG00000021759	eif3g (ENSHBUG00000021771)	p2ry11 (ENSHBUG00000021790)	ppan (ENSHBUG00000021830)	ENSHBUG00000021881	ENSHBUG00000021889	ENSHBUG00000021898	ENSHBUG00000021909	ENSHBUG00000021918	ENSHBUG00000021932	ENSHBUG00000021956	trip10a (ENSHBUG00000022035)	olfm2a (ENSHBUG00000022064)	col5a3a (ENSHBUG00000022207)	rdh8a (ENSHBUG00000022258)	notch3 (ENSHBUG00000022285) #22	ENSHBUG00000022311	ENSHBUG00000022323	nr5a5 (ENSHBUG00000022393)	CAMSAP3 (ENSHBUG00000022439)	xab2 (ENSHBUG00000022499)	ENSHBUG00000022520
Lyretail cichlid	MODERN SPECIES	345	eif3g (ENSNBRG00000008563)	ENSNBRG00000008512	ENSNBRG00000008496	p2ry11 (ENSNBRG00000008477)	ppan (ENSNBRG00000008460)	ENSNBRG00000008442	ENSNBRG00000008420	ENSNBRG00000008387	ENSNBRG00000008305	trip10a (ENSNBRG00000008237)	olfm2a (ENSNBRG00000008202)	ENSNBRG00000008184	ENSNBRG00000008130	ENSNBRG00000008110	rdh8a (ENSNBRG00000008096)	notch3 (ENSNBRG00000007991) #22	ENSNBRG00000007906	ENSNBRG00000007878	nr5a5 (ENSNBRG00000007862)	CAMSAP3 (ENSNBRG00000007784)	xab2 (ENSNBRG00000007686)	ENSNBRG00000007570	ENSNBRG00000007435
Nile tilapia	MODERN SPECIES	16	ENSONIG00000001573	eif3g (ENSONIG00000001592)	p2ry11 (ENSONIG00000020938)	angptl6 (ENSONIG00000001601)	ENSONIG00000032519	ENSONIG00000031116	ENSONIG00000042462	ENSONIG00000033765	ENSONIG00000001603	ENSONIG00000001602	trip10a (ENSONIG00000001604)	ppan (ENSONIG00000001598)	olfm2a (ENSONIG00000001613)	col5a3a (ENSONIG00000001614)	rdh8a (ENSONIG00000001642)	notch3 (ENSONIG00000001645) #22	ENSONIG00000001667	ENSONIG00000001673	nr5a5 (ENSONIG00000001686)	CAMSAP3 (ENSONIG00000001690)	xab2 (ENSONIG00000001695)	ENSONIG00000001739	ENSONIG00000033971	ENSONIG00000030466	ENSONIG00000031800	ENSONIG00000042752	ENSONIG00000036512	ENSONIG00000039916	ENSONIG00000037975	stxbp2 (ENSONIG00000001853)	pet100 (ENSONIG00000042820)
Percomorphaceae_C	ANCESTRAL SPECIES		ENSGT00940000159005.d	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263646	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347
Eupercaria	ANCESTRAL SPECIES	3	ENSGT00940000159005.c.a.a.e.b.b	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT01100000263646	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Eupecaria_A	ANCESTRAL SPECIES	5	ENSGT01030000235614	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347
Ballan wrasse	MODERN SPECIES	154	ENSLBEG00000020608	ENSLBEG00000020637	ENSLBEG00000020702	s1pr2 (ENSLBEG00000020755)	dnmt1 (ENSLBEG00000020786)	eif3g (ENSLBEG00000020866)	p2ry11 (ENSLBEG00000020886)	ppan (ENSLBEG00000020897)	ENSLBEG00000020983	ENSLBEG00000021025	trip10a (ENSLBEG00000021121)	olfm2a (ENSLBEG00000021291)	ENSLBEG00000021381	ENSLBEG00000021443	rdh8a (ENSLBEG00000021465)	notch3 (ENSLBEG00000021505) #22	ENSLBEG00000021672	ENSLBEG00000021718	nr5a5 (ENSLBEG00000021736)	CAMSAP3 (ENSLBEG00000021792)	xab2 (ENSLBEG00000021862)	ENSLBEG00000021948	ENSLBEG00000022051	ENSLBEG00000022154	stxbp2 (ENSLBEG00000022200)	pet100 (ENSLBEG00000022256)	brd4 (ENSLBEG00000022293)	lpar2a (ENSLBEG00000022382)	pbx4 (ENSLBEG00000022426)	ENSLBEG00000022500	atp13a1 (ENSLBEG00000022563)
Eupecaria_B	ANCESTRAL SPECIES		ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347
Perciformes	ANCESTRAL SPECIES	1	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT01100000263752	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Cottioidei	ANCESTRAL SPECIES	1	ENSGT01100000263643	ENSGT01100000263610	ENSGT00390000016292	ENSGT00940000158827	ENSGT00940000156559	ENSGT00940000158377.a	ENSGT00940000158767	ENSGT00940000159539	ENSGT00940000165921	ENSGT00390000006939.i.b	ENSGT00940000168178	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064	ENSGT00390000007919	ENSGT00940000157774
Lumpfish	MODERN SPECIES	23	ENSCLMG00005014929	rnf113a (ENSCLMG00005014930)	strada (ENSCLMG00005014983)	ddx42 (ENSCLMG00005014996)	limd2 (ENSCLMG00005015095)	MAP3K3 (ENSCLMG00005015096)	gfap (ENSCLMG00005015113)	kcnh6a (ENSCLMG00005015117)	DCAF7 (ENSCLMG00005015120)	angptl6 (ENSCLMG00005015121)	ENSCLMG00005015209	trip10a (ENSCLMG00005015214)	olfm2a (ENSCLMG00005015700)	col5a3a (ENSCLMG00005015703)	rdh8a (ENSCLMG00005015707)	notch3 (ENSCLMG00005015771) #22	ENSCLMG00005019294	nr5a5 (ENSCLMG00005019297)	CAMSAP3 (ENSCLMG00005019298)	xab2 (ENSCLMG00005019301)	ENSCLMG00005019351	ENSCLMG00005019929	stxbp2 (ENSCLMG00005019936)	pet100 (ENSCLMG00005019997)	brd4 (ENSCLMG00005019998)	lpar2a (ENSCLMG00005020000)	pbx4 (ENSCLMG00005020003)	ENSCLMG00005020058	atp13a1 (ENSCLMG00005020067)	ENSCLMG00005020140	ENSCLMG00005020141
Stickleback	MODERN SPECIES	10	ENSGACG00000009736	rnf113a (ENSGACG00000009738)	strada (ENSGACG00000009767)	ddx42 (ENSGACG00000009782)	limd2 (ENSGACG00000009791)	MAP3K3 (ENSGACG00000009795)	gfap (ENSGACG00000009804)	kcnh6a (ENSGACG00000009821)	DCAF7 (ENSGACG00000009828)	ENSGACG00000009845	ENSGACG00000009852	trip10a (ENSGACG00000009854)	olfm2a (ENSGACG00000009875)	col5a3a (ENSGACG00000009896)	rdh8a (ENSGACG00000009914)	notch3 (ENSGACG00000009926) #22	RDH8 (ENSGACG00000009943)	ENSGACG00000009946	nr5a5 (ENSGACG00000009952)	CAMSAP3 (ENSGACG00000009967)	xab2 (ENSGACG00000009978)	ENSGACG00000010000	ENSGACG00000010018	ENSGACG00000010034	stxbp2 (ENSGACG00000010039)	brd4 (ENSGACG00000010106)	lpar2a (ENSGACG00000010121)	pbx4 (ENSGACG00000010133)	ENSGACG00000010139	atp13a1 (ENSGACG00000010142)	ENSGACG00000010155
Perciformes_a	ANCESTRAL SPECIES	1	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT01100000263752	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b
Channel bull blenny	MODERN SPECIES	22	ENSCGOG00000006625	ENSCGOG00000006628	ENSCGOG00000006638	s1pr2 (ENSCGOG00000006643)	dnmt1 (ENSCGOG00000006723)	eif3g (ENSCGOG00000009871)	p2ry11 (ENSCGOG00000009903)	ppan (ENSCGOG00000009912)	ENSCGOG00000010040	ENSCGOG00000010103	trip10a (ENSCGOG00000010118)	olfm2a (ENSCGOG00000010504)	ENSCGOG00000010509	ENSCGOG00000010513	rdh8a (ENSCGOG00000010517)	notch3 (ENSCGOG00000010613) #22	RDH8 (ENSCGOG00000012731)	ENSCGOG00000012733	nr5a5 (ENSCGOG00000012753)	CAMSAP3 (ENSCGOG00000012755)	xab2 (ENSCGOG00000012790)	ENSCGOG00000013451	ENSCGOG00000013594	ENSCGOG00000017678	ENSCGOG00000017680	ENSCGOG00000017681	stxbp2 (ENSCGOG00000017711)	pet100 (ENSCGOG00000018510)	brd4 (ENSCGOG00000018513)	lpar2a (ENSCGOG00000018521)	pbx4 (ENSCGOG00000018523)
Pike perch	MODERN SPECIES	27	ENSSLUG00000008850	ENSSLUG00000008867	ENSSLUG00000008873	s1pr2 (ENSSLUG00000008878)	dnmt1 (ENSSLUG00000008937)	eif3g (ENSSLUG00000009895)	p2ry11 (ENSSLUG00000009918)	ppan (ENSSLUG00000009926)	ENSSLUG00000009940	ENSSLUG00000009943	ENSSLUG00000009948	trip10a (ENSSLUG00000009989)	olfm2a (ENSSLUG00000010733)	col5a3a (ENSSLUG00000010775)	rdh8a (ENSSLUG00000011128)	notch3 (ENSSLUG00000011272) #22	ENSSLUG00000013254	ENSSLUG00000013259	nr5a5 (ENSSLUG00000013273)	ENSSLUG00000013282	ENSSLUG00000013291	xab2 (ENSSLUG00000013313)	ENSSLUG00000013433	ENSSLUG00000013598	ENSSLUG00000013602	stxbp2 (ENSSLUG00000013789)	pet100 (ENSSLUG00000017700)	lpar2a (ENSSLUG00000017727)	pbx4 (ENSSLUG00000017732)	ENSSLUG00000017741	atp13a1 (ENSSLUG00000017769)
Eupecaria_C	ANCESTRAL SPECIES	25	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.r.a	ENSGT00940000162888.A.a.b	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	23	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b.r.b	ENSGT00940000162888.A.a.b	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064
European seabass	MODERN SPECIES	21	ENSDLAG00005021431	raver1 (ENSDLAG00005021412)	TYK2 (ENSDLAG00005020950)	CDC37 (ENSDLAG00005020927)	ENSDLAG00005020919	ENSDLAG00005020907	dnmt1 (ENSDLAG00005018520)	p2ry11 (ENSDLAG00005018413)	ppan (ENSDLAG00005018327)	angptl6 (ENSDLAG00005018301)	ENSDLAG00005018287	trip10a (ENSDLAG00005018006)	olfm2a (ENSDLAG00005017987)	col5a3a (ENSDLAG00005017847)	rdh8a (ENSDLAG00005033050)	notch3 (ENSDLAG00005016757) #22	ENSDLAG00005016716	ENSDLAG00005016710	nr5a5 (ENSDLAG00005016704)	ENSDLAG00005016678	xab2 (ENSDLAG00005016560)	ENSDLAG00005018777	ENSDLAG00005015920	stxbp2 (ENSDLAG00005015253)	pet100 (ENSDLAG00005032602)	ENSDLAG00005015204	lpar2a (ENSDLAG00005015196)	pbx4 (ENSDLAG00005034546)	ENSDLAG00005034985	atp13a1 (ENSDLAG00005014074)	ENSDLAG00005014040
Large yellow croaker	MODERN SPECIES	483	ENSLCRG00005005346	ENSLCRG00005005347	ENSLCRG00005005348	ENSLCRG00005005354	s1pr2 (ENSLCRG00005005356)	dnmt1 (ENSLCRG00005005368)	ENSLCRG00005005937	eif3g (ENSLCRG00005005940)	p2ry11 (ENSLCRG00005005942)	ppan (ENSLCRG00005005944)	ENSLCRG00005005955	trip10a (ENSLCRG00005005962)	olfm2a (ENSLCRG00005006212)	col5a3a (ENSLCRG00005006221)	rdh8a (ENSLCRG00005006260)	notch3 (ENSLCRG00005006347) #22	ENSLCRG00005012945	ENSLCRG00005012946	nr5a5 (ENSLCRG00005012947)	CAMSAP3 (ENSLCRG00005012948)	xab2 (ENSLCRG00005012959)	ENSLCRG00005013313	ENSLCRG00005013319	ENSLCRG00005013327	ENSLCRG00005013329	ENSLCRG00005013331	ENSLCRG00005013334	CA10 (ENSLCRG00005013338)	rpl23 (ENSLCRG00005013347)	ENSLCRG00005013360	smarce1 (ENSLCRG00005013365)
Gilthead seabream	MODERN SPECIES	15	ENSSAUG00010009623	ENSSAUG00010009626	ENSSAUG00010009629	ENSSAUG00010009634	s1pr2 (ENSSAUG00010009638)	dnmt1 (ENSSAUG00010009735)	eif3g (ENSSAUG00010018509)	p2ry11 (ENSSAUG00010018512)	ppan (ENSSAUG00010018514)	ENSSAUG00010018542	ENSSAUG00010018545	trip10a (ENSSAUG00010018555)	olfm2a (ENSSAUG00010018788)	col5a3a (ENSSAUG00010018793)	rdh8a (ENSSAUG00010018804)	notch3 (ENSSAUG00010018852) #22	ENSSAUG00010020856	ENSSAUG00010020857	nr5a5 (ENSSAUG00010020858)	CAMSAP3 (ENSSAUG00010020859)	xab2 (ENSSAUG00010020865)	ENSSAUG00010020906	ENSSAUG00010021441	ENSSAUG00010021452	ENSSAUG00010021880	ENSSAUG00010021887	ENSSAUG00010021888	ENSSAUG00010017578	ENSSAUG00010017668	ENSSAUG00010017669	ENSSAUG00010017747
Tetraodontidae	ANCESTRAL SPECIES	8	ENSGT00390000013443.c.i	ENSGT00390000012647	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263646	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b	ENSGT00390000011347	ENSGT00550000075064
Fugu	MODERN SPECIES	17	CDC37 (ENSTRUG00000008922)	ENSTRUG00000028798	ENSTRUG00000024685	ENSTRUG00000022863	s1pr2 (ENSTRUG00000008897)	dnmt1 (ENSTRUG00000008132)	eif3g (ENSTRUG00000024880)	p2ry11 (ENSTRUG00000007913)	ppan (ENSTRUG00000007656)	angptl6 (ENSTRUG00000007516)	ENSTRUG00000022300	trip10a (ENSTRUG00000007309)	olfm2a (ENSTRUG00000007092)	ENSTRUG00000031065	rdh8a (ENSTRUG00000005536)	notch3 (ENSTRUG00000004154) #22	ENSTRUG00000020521	nr5a5 (ENSTRUG00000003884)	CAMSAP3 (ENSTRUG00000003622)	xab2 (ENSTRUG00000002401)	ENSTRUG00000033323	ENSTRUG00000027646	ENSTRUG00000031112	ENSTRUG00000015032	ENSTRUG00000030288	ENSTRUG00000023567	stxbp2 (ENSTRUG00000014898)	pet100 (ENSTRUG00000024766)	brd4 (ENSTRUG00000014764)	lpar2a (ENSTRUG00000024303)	pbx4 (ENSTRUG00000022430)
Tetraodon	MODERN SPECIES	18	prkcsh (ENSTNIG00000018571)	raver1 (ENSTNIG00000018570)	ENSTNIG00000018569	CDC37 (ENSTNIG00000018568)	s1pr2 (ENSTNIG00000000436)	dnmt1 (ENSTNIG00000018567)	eif3g (ENSTNIG00000018566)	p2ry11 (ENSTNIG00000018565)	ppan (ENSTNIG00000018564)	angptl6 (ENSTNIG00000018563)	ENSTNIG00000001536	trip10a (ENSTNIG00000018562)	olfm2a (ENSTNIG00000018561)	col5a3a (ENSTNIG00000018560)	rdh8a (ENSTNIG00000001228)	notch3 (ENSTNIG00000018559) #22	ENSTNIG00000018558	nr5a5 (ENSTNIG00000018557)	CAMSAP3 (ENSTNIG00000018556)	pbx4 (ENSTNIG00000018555)	atp13a1 (ENSTNIG00000001019)	atp13a1 (ENSTNIG00000018554)	ENSTNIG00000001304	ENSTNIG00000018553	GMIP (ENSTNIG00000018552)	COLGALT1 (ENSTNIG00000018551)	pgls (ENSTNIG00000018550)	ENSTNIG00000018549	vac14 (ENSTNIG00000018548)	ENSTNIG00000018547	slc27a1a (ENSTNIG00000018546)
Percomorphaceae_D	ANCESTRAL SPECIES	1	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.d	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b
Anabantaria	ANCESTRAL SPECIES	6	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00980000198723	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b
Zig-zag eel	MODERN SPECIES	22	CDC37 (ENSMAMG00000012251)	ENSMAMG00000028453	ENSMAMG00000012276	ENSMAMG00000012288	ENSMAMG00000012322	dnmt1 (ENSMAMG00000012342)	ppan (ENSMAMG00000012418)	ENSMAMG00000012426	eif3g (ENSMAMG00000012435)	angptl6 (ENSMAMG00000012592)	ENSMAMG00000012602	trip10a (ENSMAMG00000012628)	olfm2a (ENSMAMG00000012664)	col5a3a (ENSMAMG00000012693)	rdh8a (ENSMAMG00000012845)	notch3 (ENSMAMG00000012868) #22	ENSMAMG00000012893	ENSMAMG00000012905	nr5a5 (ENSMAMG00000012920)	ENSMAMG00000012939	ENSMAMG00000024440	xab2 (ENSMAMG00000012988)	ENSMAMG00000025310	ENSMAMG00000024541	ENSMAMG00000028383	ENSMAMG00000027578	stxbp2 (ENSMAMG00000020313)	pet100 (ENSMAMG00000020334)	ENSMAMG00000020344	lpar2a (ENSMAMG00000020384)	pbx4 (ENSMAMG00000020388)
Anabantoidei	ANCESTRAL SPECIES	7	ENSGT01010000222549	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT01100000263752	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Climbing perch	MODERN SPECIES	21	ENSATEG00000021095	ENSATEG00000021100	ENSATEG00000021107	ENSATEG00000021135	s1pr2 (ENSATEG00000021169)	dnmt1 (ENSATEG00000021176)	eif3g (ENSATEG00000021200)	p2ry11 (ENSATEG00000021211)	ppan (ENSATEG00000021221)	ENSATEG00000021239	ENSATEG00000021255	trip10a (ENSATEG00000021289)	olfm2a (ENSATEG00000021321)	col5a3a (ENSATEG00000021340)	rdh8a (ENSATEG00000021445)	notch3 (ENSATEG00000021480) #22	ENSATEG00000021544	ENSATEG00000021550	nr5a5 (ENSATEG00000021556)	ENSATEG00000021565	xab2 (ENSATEG00000021587)	ENSATEG00000027852	ENSATEG00000026449	ENSATEG00000025854	ENSATEG00000025733	ENSATEG00000027910	ENSATEG00000026187	ENSATEG00000029429	ENSATEG00000023670	ENSATEG00000023665	ENSATEG00000027635
Siamese fighting fish	MODERN SPECIES	19	ENSBSLG00000016898	ENSBSLG00000016736	ENSBSLG00000016630	ENSBSLG00000016225	s1pr2 (ENSBSLG00000016221)	dnmt1 (ENSBSLG00000014235)	eif3g (ENSBSLG00000013997)	p2ry11 (ENSBSLG00000013996)	ppan (ENSBSLG00000013988)	angptl6 (ENSBSLG00000013884)	ENSBSLG00000013877	trip10a (ENSBSLG00000013370)	olfm2a (ENSBSLG00000013141)	col5a3a (ENSBSLG00000011791)	rdh8a (ENSBSLG00000011633)	notch3 (ENSBSLG00000009150) #22	RDH8 (ENSBSLG00000008854)	ENSBSLG00000008837	nr5a5 (ENSBSLG00000008824)	CAMSAP3 (ENSBSLG00000008794)	xab2 (ENSBSLG00000008318)	ENSBSLG00000008250	ENSBSLG00000008230	ENSBSLG00000020561	ENSBSLG00000020552	ENSBSLG00000020393	ENSBSLG00000018532	ENSBSLG00000018461	ENSBSLG00000018366	ENSBSLG00000018303	stxbp2 (ENSBSLG00000016240)
Carangaria	ANCESTRAL SPECIES	4	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.d	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT00940000164626.b.b.d	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Carangaria_A	ANCESTRAL SPECIES	28	ENSGT00940000159005.d	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000155091.fb	ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT01000000214708.a.a	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22
Seriola	ANCESTRAL SPECIES	191										ENSGT00940000160969	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22
Yellowtail amberjack	MODERN SPECIES	2435										angptl6 (ENSSLDG00000013701)	ENSSLDG00000013719	trip10a (ENSSLDG00000013744)	olfm2a (ENSSLDG00000013774)	col5a3a (ENSSLDG00000013843)	rdh8a (ENSSLDG00000013958)	notch3 (ENSSLDG00000014049) #22	RDH8 (ENSSLDG00000014179)	MFAP4 (ENSSLDG00000014163)
Greater amberjack	MODERN SPECIES	17	hsd17b1 (ENSSDUG00000017322)	stk17al (ENSSDUG00000017303)	atp6v0a1a (ENSSDUG00000017197)	CAVIN1 (ENSSDUG00000017172)	stat3 (ENSSDUG00000017049)	stat5a (ENSSDUG00000016962)	ENSSDUG00000016900	hcrt (ENSSDUG00000016887)	kcnh4a (ENSSDUG00000016854)	angptl6 (ENSSDUG00000016833)	ENSSDUG00000016776	trip10a (ENSSDUG00000016701)	olfm2a (ENSSDUG00000016664)	col5a3a (ENSSDUG00000016512)	rdh8a (ENSSDUG00000016474)	notch3 (ENSSDUG00000016416) #22	MFAP4 (ENSSDUG00000016355)	ENSSDUG00000016340
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	158	CDC37 (ENSLCAG00010000148)	ENSLCAG00010000142	ENSLCAG00010000138	s1pr2 (ENSLCAG00010026142)	dnmt1 (ENSLCAG00010025990)	eif3g (ENSLCAG00010025948)	p2ry11 (ENSLCAG00010025943)	ppan (ENSLCAG00010025941)	ENSLCAG00010025938	ENSLCAG00010025930	trip10a (ENSLCAG00010025921)	olfm2a (ENSLCAG00010025917)	ENSLCAG00010025913	ENSLCAG00010025905	rdh8a (ENSLCAG00010025902)	notch3 (ENSLCAG00010025861) #22	MFAP4 (ENSLCAG00010025838)	ENSLCAG00010025836
Barramundi perch	MODERN SPECIES	1345																ENSLCAG00010013972 #22	MFAP4 (ENSLCAG00010013975)	ENSLCAG00010013977
Pleuronectoidei	ANCESTRAL SPECIES	2	ENSGT00940000159005.c.a.b	ENSGT00940000159005.c.a.a.e.b.b	ENSGT00940000159005.c.a.a.e.a	ENSGT01050000244887.A.a.a.b	ENSGT00390000005100	ENSGT00510000047802	ENSGT01030000234518.C.a.a	ENSGT00530000064158	ENSGT00940000160969	ENSGT00940000155091.fb	ENSGT00940000159005.c.a.a.e.b.a	ENSGT00950000183047.c.a.a	ENSGT00940000159148.a	ENSGT00940000154535.A	ENSGT00940000155412.a.a.a	ENSGT00940000160234.b #22	ENSGT00940000154615.i.b	ENSGT00940000165414	ENSGT00940000163377.a.b.b	ENSGT00940000153391.c.a	ENSGT00950000182975.a.b.a.a	ENSGT00550000075140	ENSGT00940000162888.A.a.a.b	ENSGT00940000162888.A.a.b	ENSGT01030000235442	ENSGT01030000234854	ENSGT00940000160045	ENSGT00390000016884	ENSGT00940000162790.a.u.b	ENSGT01050000244941.B.c.b.b	ENSGT00940000165175.b
Turbot	MODERN SPECIES	10	ENSSMAG00000004422	ENSSMAG00000004401	ENSSMAG00000004370	ENSSMAG00000004215	s1pr2 (ENSSMAG00000004201)	dnmt1 (ENSSMAG00000004135)	eif3g (ENSSMAG00000004122)	p2ry11 (ENSSMAG00000004114)	ppan (ENSSMAG00000004098)	ENSSMAG00000004089	ENSSMAG00000004075	trip10a (ENSSMAG00000004005)	olfm2a (ENSSMAG00000003975)	col5a3a (ENSSMAG00000003678)	rdh8a (ENSSMAG00000003649)	notch3 (ENSSMAG00000003624) #22	ENSSMAG00000003603	ENSSMAG00000003577	ENSSMAG00000003566	ENSSMAG00000003355	ENSSMAG00000003250	nr5a5 (ENSSMAG00000003209)	ENSSMAG00000003143	xab2 (ENSSMAG00000003095)	ENSSMAG00000029610	ENSSMAG00000003017	stxbp2 (ENSSMAG00000002983)	pet100 (ENSSMAG00000002976)	ENSSMAG00000002924	lpar2a (ENSSMAG00000002890)	pbx4 (ENSSMAG00000002849)
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	242																ENSCSEG00000007432 #22
Tongue sole	MODERN SPECIES	8														col5a3a (ENSCSEG00000020429)	rdh8a (ENSCSEG00000020453)	notch3 (ENSCSEG00000020458) #22	ENSCSEG00000020468	MAP2K4 (ENSCSEG00000020471)	tmem220 (ENSCSEG00000020476)	sco1 (ENSCSEG00000020481)	GAS7 (ENSCSEG00000020487)	rcvrna (ENSCSEG00000020491)	ENSCSEG00000020494	ENSCSEG00000020496	dhrs7ca (ENSCSEG00000020502)	ENSCSEG00000020504	ENSCSEG00000020509	radil2a (ENSCSEG00000020511)	grap2a (ENSCSEG00000020519)	ENSCSEG00000020529	ENSCSEG00000020530