Mus	ANCESTRAL SPECIES	18	ENSGT00950000182997.a.a	ENSGT00940000156942	ENSGT00940000160084 #7	ENSGT00940000154906.C.d #8	ENSGT00420000029824 #9	ENSGT00940000153968.a.b.a #10	ENSGT00390000015845 #11	ENSGT00940000155727 #12	ENSGT00390000001136 #13	ENSGT00390000007753.a #14	ENSGT00940000153986.b.a #18	ENSGT00940000156318 #19	ENSGT00940000168709	ENSGT00940000156359 #20	ENSGT01100000263497.A #21	ENSGT00940000156562 #22	ENSGT00530000063405.a #23	ENSGT00940000153498.A #24	ENSGT00940000158149 #25	ENSGT00940000158294 #26	ENSGT00390000014996 #27	ENSGT00550000074870.b #28	ENSGT00390000014722 #29	ENSGT00940000155925 #30	ENSGT00940000157116 #31	ENSGT00940000157866 #32	ENSGT00390000002582 #33	ENSGT00940000157852 #34	ENSGT00940000155142 #35	ENSGT00390000011176 #36	ENSGT00940000156175 #37
Mus_A	ANCESTRAL SPECIES	14	ENSGT00950000182997.a.a	ENSGT00940000156942	ENSGT00940000160084 #7	ENSGT00940000154906.C.d #8	ENSGT00420000029824 #9	ENSGT00940000153968.a.b.a #10	ENSGT00390000015845 #11	ENSGT00940000155727 #12	ENSGT00390000001136 #13	ENSGT00390000007753.a #14	ENSGT00940000153986.b.a #18	ENSGT00940000156318 #19	ENSGT00940000168709	ENSGT00940000156359 #20	ENSGT01100000263497.A #21	ENSGT00940000156562 #22	ENSGT00530000063405.a #23	ENSGT00940000153498.A #24	ENSGT00940000158149 #25	ENSGT00940000158294 #26	ENSGT00390000014996.db #27	ENSGT00550000074870.b #28	ENSGT00390000014722 #29	ENSGT00940000155925 #30	ENSGT00940000157116 #31	ENSGT00940000157866 #32	ENSGT00390000002582 #33	ENSGT00940000157852 #34	ENSGT00940000155142 #35	ENSGT00390000011176 #36	ENSGT00940000156175 #37
Mus_B	ANCESTRAL SPECIES	13	ENSGT00950000182997.a.a	ENSGT00940000156942	ENSGT00940000160084 #7	ENSGT00940000154906.C.d #8	ENSGT00420000029824 #9	ENSGT00940000153968.a.b.a #10	ENSGT00390000015845 #11	ENSGT00940000155727 #12	ENSGT00390000001136 #13	ENSGT00390000007753.a #14	ENSGT00940000153986.b.a #18	ENSGT00940000156318 #19	ENSGT00940000168709	ENSGT00940000156359 #20	ENSGT01100000263497.A #21	ENSGT00940000156562 #22	ENSGT00530000063405.a #23	ENSGT00940000153498.A #24	ENSGT00940000158149 #25	ENSGT00940000158294 #26	ENSGT00390000014996.db #27	ENSGT00550000074870.b #28	ENSGT00390000014722 #29	ENSGT00940000155925 #30	ENSGT00940000157116 #31	ENSGT00940000157866 #32	ENSGT00390000002582 #33	ENSGT00940000157852 #34	ENSGT00940000155142 #35	ENSGT00390000011176 #36	ENSGT00940000156175 #37
Mouse	MODERN SPECIES	4	Chrm3 (ENSMUSG00000046159) #7	Ryr2 (ENSMUSG00000021313) #8	Mtr (ENSMUSG00000021311) #9	Actn2 (ENSMUSG00000052374) #10	Heatr1 (ENSMUSG00000050244) #11	Lgals8 (ENSMUSG00000057554) #12	Edaradd (ENSMUSG00000095105) #13	Ero1b (ENSMUSG00000057069) #14	Prl2c3 (ENSMUSG00000056457) #15	Prl2c2 (ENSMUSG00000079092) #16	Prl2c5 (ENSMUSG00000055360) #17	Gpr137b (ENSMUSG00000021306) #18	Nid1 (ENSMUSG00000005397) #19	Lyst (ENSMUSG00000019726) #20	Gng4 (ENSMUSG00000021303) #21	B3galnt2 (ENSMUSG00000039242) #22	Tbce (ENSMUSG00000039233) #23	Ggps1 (ENSMUSG00000021302) #24	Arid4b (ENSMUSG00000039219) #25	Hecw1 (ENSMUSG00000021301) #26	Mrpl32 (ENSMUSG00000015672) #27	Psma2 (ENSMUSG00000015671) #28	AW209491 (ENSMUSG00000039182) #29	Gli3 (ENSMUSG00000021318) #30	Inhba (ENSMUSG00000041324) #31	Sugct (ENSMUSG00000055137) #32	Mplkip (ENSMUSG00000012429) #33	Cdk13 (ENSMUSG00000041297) #34	Rala (ENSMUSG00000008859) #35	Yae1d1 (ENSMUSG00000075054) #36	Pou6f2 (ENSMUSG00000009734) #37
Mus_C	ANCESTRAL SPECIES	10	ENSGT00950000182997.a.a	ENSGT00940000156942	ENSGT00940000160084 #7	ENSGT00940000154906.C.d #8	ENSGT00420000029824 #9	ENSGT00940000153968.a.b.a #10	ENSGT00390000015845 #11	ENSGT00940000155727 #12	ENSGT00390000001136 #13	ENSGT00390000007753.a #14	ENSGT00940000153986.b.a #18	ENSGT00940000156318 #19	ENSGT00940000168709	ENSGT00940000156359 #20	ENSGT01100000263497.A #21	ENSGT00940000156562 #22	ENSGT00530000063405.a #23	ENSGT00940000153498.A #24	ENSGT00940000158149 #25	ENSGT00940000158294 #26	ENSGT00390000014996.db #27	ENSGT00550000074870.b #28	ENSGT00390000014722 #29	ENSGT00940000155925 #30	ENSGT00940000157116 #31	ENSGT00940000157866 #32	ENSGT00390000002582 #33	ENSGT00940000157852 #34	ENSGT00940000155142 #35	ENSGT00390000011176 #36	ENSGT00940000156175 #37
spretus	MODERN SPECIES	4	Zmynd11 (MGP_SPRETEiJ_G0019076)	Chrm3 (MGP_SPRETEiJ_G0019077) #7	Ryr2 (MGP_SPRETEiJ_G0019078) #8	Mtr (MGP_SPRETEiJ_G0019079) #9	Actn2 (MGP_SPRETEiJ_G0019080) #10	Heatr1 (MGP_SPRETEiJ_G0019081) #11	Lgals8 (MGP_SPRETEiJ_G0019082) #12	Edaradd (MGP_SPRETEiJ_G0019083) #13	Ero1b (MGP_SPRETEiJ_G0019084) #14	Gpr137b (MGP_SPRETEiJ_G0019085) #18	Nid1 (MGP_SPRETEiJ_G0019086) #19	MGP_SPRETEiJ_G0019087	Lyst (MGP_SPRETEiJ_G0019088) #20	Gng4 (MGP_SPRETEiJ_G0019089) #21	MGP_SPRETEiJ_G0019090	B3galnt2 (MGP_SPRETEiJ_G0019091) #22	Tbce (MGP_SPRETEiJ_G0019092) #23	MGP_SPRETEiJ_G0019093 #24	Arid4b (MGP_SPRETEiJ_G0019094) #25	Hecw1 (MGP_SPRETEiJ_G0019095) #26	Mrpl32 (MGP_SPRETEiJ_G0019096) #27	Psma2 (MGP_SPRETEiJ_G0019097) #28	AW209491 (MGP_SPRETEiJ_G0019098) #29	Gli3 (MGP_SPRETEiJ_G0019099) #30	Inhba (MGP_SPRETEiJ_G0019100) #31	MGP_SPRETEiJ_G0019101 #32	Cdk13 (MGP_SPRETEiJ_G0019102) #34	Rala (MGP_SPRETEiJ_G0019103) #35	Yae1d1 (MGP_SPRETEiJ_G0019104) #36	Pou6f2 (MGP_SPRETEiJ_G0019105) #37	Vps41 (MGP_SPRETEiJ_G0019106)
Steppe mouse	MODERN SPECIES	35														Gng4 (ENSMSIG00000017646) #21	ENSMSIG00000017641	B3galnt2 (ENSMSIG00000017362) #22	Tbce (ENSMSIG00000017330) #23	Ggps1 (ENSMSIG00000017308) #24	Arid4b (ENSMSIG00000017230) #25	ENSMSIG00000017216	Hecw1 (ENSMSIG00000017159) #26
Ryukyu mouse	MODERN SPECIES	4	Dip2c (MGP_CAROLIEiJ_G0018217)	MGP_CAROLIEiJ_G0018218	Chrm3 (MGP_CAROLIEiJ_G0018219) #7	Ryr2 (MGP_CAROLIEiJ_G0018220) #8	Mtr (MGP_CAROLIEiJ_G0018221) #9	Actn2 (MGP_CAROLIEiJ_G0018222) #10	Heatr1 (MGP_CAROLIEiJ_G0018223) #11	Lgals8 (MGP_CAROLIEiJ_G0018224) #12	Edaradd (MGP_CAROLIEiJ_G0018225) #13	Ero1b (MGP_CAROLIEiJ_G0018226) #14	Gpr137b (MGP_CAROLIEiJ_G0018227) #18	Nid1 (MGP_CAROLIEiJ_G0018228) #19	MGP_CAROLIEiJ_G0018229	Lyst (MGP_CAROLIEiJ_G0018230) #20	Gng4 (MGP_CAROLIEiJ_G0018231) #21	B3galnt2 (MGP_CAROLIEiJ_G0018232) #22	MGP_CAROLIEiJ_G0018233	Tbce (MGP_CAROLIEiJ_G0018234) #23	Ggps1 (MGP_CAROLIEiJ_G0018235) #24	Arid4b (MGP_CAROLIEiJ_G0018236) #25	Hecw1 (MGP_CAROLIEiJ_G0018237) #26	Mrpl32 (MGP_CAROLIEiJ_G0018238) #27	Psma2 (MGP_CAROLIEiJ_G0018239) #28	AW209491 (MGP_CAROLIEiJ_G0018240) #29	Gli3 (MGP_CAROLIEiJ_G0018241) #30	Inhba (MGP_CAROLIEiJ_G0018242) #31	Sugct (MGP_CAROLIEiJ_G0018243) #32	MGP_CAROLIEiJ_G0018244 #33	MGP_CAROLIEiJ_G0018245 #33	Cdk13 (MGP_CAROLIEiJ_G0018246) #34	Rala (MGP_CAROLIEiJ_G0018247) #35
Shrew mouse	MODERN SPECIES	7	Dip2c (MGP_PahariEiJ_G0019267)	MGP_PahariEiJ_G0019268	Chrm3 (MGP_PahariEiJ_G0019269) #7	Ryr2 (MGP_PahariEiJ_G0019270) #8	Mtr (MGP_PahariEiJ_G0019271) #9	Actn2 (MGP_PahariEiJ_G0019272) #10	Heatr1 (MGP_PahariEiJ_G0019273) #11	Lgals8 (MGP_PahariEiJ_G0019274) #12	Edaradd (MGP_PahariEiJ_G0019275) #13	Ero1b (MGP_PahariEiJ_G0019276) #14	Gpr137b (MGP_PahariEiJ_G0019277) #18	Nid1 (MGP_PahariEiJ_G0019278) #19	MGP_PahariEiJ_G0019279	Lyst (MGP_PahariEiJ_G0019280) #20	Gng4 (MGP_PahariEiJ_G0019281) #21	B3galnt2 (MGP_PahariEiJ_G0019282) #22	MGP_PahariEiJ_G0019283	MGP_PahariEiJ_G0019284	Ggps1 (MGP_PahariEiJ_G0019285) #24	Arid4b (MGP_PahariEiJ_G0019286) #25	Hecw1 (MGP_PahariEiJ_G0019287) #26	Mrpl32 (MGP_PahariEiJ_G0019288) #27	Psma2 (MGP_PahariEiJ_G0019289) #28	AW209491 (MGP_PahariEiJ_G0019290) #29	Gli3 (MGP_PahariEiJ_G0019291) #30	Inhba (MGP_PahariEiJ_G0019292) #31	Sugct (MGP_PahariEiJ_G0019293) #32	MGP_PahariEiJ_G0019294 #33	MGP_PahariEiJ_G0019295 #33	Cdk13 (MGP_PahariEiJ_G0019296) #34	Rala (MGP_PahariEiJ_G0019297) #35