Murinae ANCESTRAL SPECIES 5 ENSGT00940000162648 ENSGT00940000160804 #9 ENSGT00940000161919 #10 ENSGT00940000159107 #11 ENSGT00940000160166 #12 ENSGT00940000158417.b #13 ENSGT00940000157243 #14 ENSGT00950000182904.a.a.a #15 ENSGT00390000014801 #16 ENSGT00940000162147 #17 ENSGT00530000063948.a #18 ENSGT00950000182870.a.a.b #19 ENSGT00950000182971.B.b.d ENSGT00390000007266 #20 ENSGT00390000002996 #21 ENSGT00940000160219 #22 ENSGT00940000153269.a.a #23 ENSGT00940000153269.a.b #24 ENSGT01010000229437 ENSGT00940000159822 #25 ENSGT00940000162071 #26 ENSGT00940000161355 #27 ENSGT00940000159919 #28 ENSGT00390000007801 #29 ENSGT00390000008892 #30 ENSGT00390000003552 #31 ENSGT00940000158021 #32 ENSGT00940000167855 #33 ENSGT00940000159283.d #34 ENSGT00950000182919.B.a #35 ENSGT00390000009464 #36 Mus DUPLICATION Mus DUPLICATION Mus ANCESTRAL SPECIES 7 ENSGT00390000018324 #8 ENSGT00940000160804 #9 ENSGT00940000161919 #10 ENSGT00940000159107 #11 ENSGT00940000160166 #12 ENSGT00940000158417.b #13 ENSGT00940000157243 #14 ENSGT00950000182904.a.a.a #15 ENSGT00390000014801 #16 ENSGT00940000162147 #17 ENSGT00530000063948.a #18 ENSGT00950000182870.a.a.b #19 ENSGT00950000182971.B.b.d ENSGT00390000007266 #20 ENSGT00390000002996 #21 ENSGT00940000160219.s.a #22 ENSGT00940000153269.a.a #23 ENSGT00940000153269.a.b #24 ENSGT01010000229437 ENSGT00940000159822 #25 ENSGT00940000162071 #26 ENSGT00940000161355 #27 ENSGT00940000159919 #28 ENSGT00390000007801 #29 ENSGT00390000008892 #30 ENSGT00390000003552 #31 ENSGT00940000158021 #32 ENSGT00940000167855 #33 ENSGT00940000159283.d #34 ENSGT00950000182919.B.a #35 ENSGT00390000009464 #36 Mus_A ANCESTRAL SPECIES 9 ENSGT00390000018324 #8 ENSGT00940000160804 #9 ENSGT00940000161919 #10 ENSGT00940000159107 #11 ENSGT00940000160166 #12 ENSGT00940000158417.b #13 ENSGT00940000157243 #14 ENSGT00950000182904.a.a.a #15 ENSGT00390000014801 #16 ENSGT00940000162147 #17 ENSGT00530000063948.a #18 ENSGT00950000182870.a.a.b #19 ENSGT00950000182971.B.b.d ENSGT00390000007266 #20 ENSGT00390000002996 #21 ENSGT00940000160219.s.a #22 ENSGT00940000153269.a.a #23 ENSGT00940000153269.a.b #24 ENSGT01010000229437 ENSGT00940000159822 #25 ENSGT00940000162071 #26 ENSGT00940000161355 #27 ENSGT00940000159919 #28 ENSGT00390000007801 #29 ENSGT00390000008892 #30 ENSGT00390000003552 #31 ENSGT00940000158021 #32 ENSGT00940000167855 #33 ENSGT00940000159283.d #34 ENSGT00950000182919.B.a #35 ENSGT00390000009464 #36 Mus_B ANCESTRAL SPECIES 8 ENSGT00390000018324 #8 ENSGT00940000160804 #9 ENSGT00940000161919 #10 ENSGT00940000159107 #11 ENSGT00940000160166 #12 ENSGT00940000158417.b #13 ENSGT00940000157243 #14 ENSGT00950000182904.a.a.a #15 ENSGT00390000014801 #16 ENSGT00940000162147 #17 ENSGT00530000063948.a #18 ENSGT00950000182870.a.a.b #19 ENSGT00950000182971.B.b.d ENSGT00390000007266 #20 ENSGT00390000002996 #21 ENSGT00940000160219.s.a #22 ENSGT00940000153269.a.a #23 ENSGT00940000153269.a.b #24 ENSGT01010000229437 ENSGT00940000159822 #25 ENSGT00940000162071 #26 ENSGT00940000161355 #27 ENSGT00940000159919 #28 ENSGT00390000007801 #29 ENSGT00390000008892 #30 ENSGT00390000003552 #31 ENSGT00940000158021 #32 ENSGT00940000167855 #33 ENSGT00940000159283.d #34 ENSGT00950000182919.B.a #35 ENSGT00390000009464 #36 Mus_C ANCESTRAL SPECIES 6 ENSGT00390000018324 #8 ENSGT00940000160804 #9 ENSGT00940000161919 #10 ENSGT00940000159107 #11 ENSGT00940000160166 #12 ENSGT00940000158417.b #13 ENSGT00940000157243 #14 ENSGT00950000182904.a.a.a #15 ENSGT00390000014801 #16 ENSGT00940000162147 #17 ENSGT00530000063948.a #18 ENSGT00950000182870.a.a.b #19 ENSGT00950000182971.B.b.d ENSGT00390000007266 #20 ENSGT00390000002996 #21 ENSGT00940000160219.s.a #22 ENSGT00940000153269.a.a #23 ENSGT00940000153269.a.b #24 ENSGT01010000229437 ENSGT00940000159822 #25 ENSGT00940000162071 #26 ENSGT00940000161355 #27 ENSGT00940000159919 #28 ENSGT00390000007801 #29 ENSGT00390000008892 #30 ENSGT00390000003552 #31 ENSGT00940000158021 #32 ENSGT00940000167855 #33 ENSGT00940000159283.d #34 ENSGT00950000182919.B.a #35 ENSGT00390000009464 #36 spretus MODERN SPECIES 12 Ubap2l (MGP_SPRETEiJ_G0026165) #7 Hax1 (MGP_SPRETEiJ_G0026164) #8 Atp8b2 (MGP_SPRETEiJ_G0026163) #9 Il6ra (MGP_SPRETEiJ_G0026162) #10 She (MGP_SPRETEiJ_G0026161) #11 Ube2q1 (MGP_SPRETEiJ_G0026160) #12 MGP_SPRETEiJ_G0026159 #13 Adar (MGP_SPRETEiJ_G0026158) #14 Kcnn3 (MGP_SPRETEiJ_G0026157) #15 Pmvk (MGP_SPRETEiJ_G0026156) #16 Pbxip1 (MGP_SPRETEiJ_G0026155) #17 Pygo2 (MGP_SPRETEiJ_G0026154) #18 Shc1 (MGP_SPRETEiJ_G0026153) #19 Flad1 (MGP_SPRETEiJ_G0026151) #20 Lenep (MGP_SPRETEiJ_G0026150) #21 Zbtb7b (MGP_SPRETEiJ_G0026149) #22 MGP_SPRETEiJ_G0026148 #23 Dcst1 (MGP_SPRETEiJ_G0026147) #24 Adam15 (MGP_SPRETEiJ_G0026146) #25 Efna4 (MGP_SPRETEiJ_G0026145) #26 Efna3 (MGP_SPRETEiJ_G0026144) #27 Efna1 (MGP_SPRETEiJ_G0026143) #28 Slc50a1 (MGP_SPRETEiJ_G0026142) #29 Dpm3 (MGP_SPRETEiJ_G0026141) #30 Krtcap2 (MGP_SPRETEiJ_G0026140) #31 Trim46 (MGP_SPRETEiJ_G0026139) #32 Muc1 (MGP_SPRETEiJ_G0026138) #33 Thbs3 (MGP_SPRETEiJ_G0026137) #34 Mtx1 (MGP_SPRETEiJ_G0026136) #35 Gba (MGP_SPRETEiJ_G0026135) #36 Entrep3 (MGP_SPRETEiJ_G0026134) #37 Steppe mouse MODERN SPECIES 3110 Hax1 (ENSMSIG00000027302) #8 Atp8b2 (ENSMSIG00000027245) #9 Il6ra (ENSMSIG00000027228) #10 She (ENSMSIG00000027176) #11 Ube2q1 (ENSMSIG00000027148) #12 ENSMSIG00000027143 ENSMSIG00000027130 #13 Adar (ENSMSIG00000027077) #14 Kcnn3 (ENSMSIG00000027072) #15 Pmvk (ENSMSIG00000027047) #16 Pbxip1 (ENSMSIG00000027031) #17 Pygo2 (ENSMSIG00000027012) #18 Shc1 (ENSMSIG00000026983) #19 ENSMSIG00000026965 Flad1 (ENSMSIG00000026920) #20 Zbtb7b (ENSMSIG00000026907) #22 Dcst2 (ENSMSIG00000026896) #23 Dcst1 (ENSMSIG00000026871) #24 ENSMSIG00000026865 Adam15 (ENSMSIG00000026426) #25 Efna4 (ENSMSIG00000026408) #26 Efna3 (ENSMSIG00000026392) #27 Efna1 (ENSMSIG00000026349) #28 Slc50a1 (ENSMSIG00000026312) #29 Dpm3 (ENSMSIG00000026300) #30 ENSMSIG00000026267 #31 Trim46 (ENSMSIG00000026197) #32 Muc1 (ENSMSIG00000026160) #33 Thbs3 (ENSMSIG00000026063) #34 Mtx1 (ENSMSIG00000026034) #35 Gba (ENSMSIG00000025996) #36 Mouse MODERN SPECIES 12 Hax1 (ENSMUSG00000027944) #8 Atp8b2 (ENSMUSG00000060671) #9 Il6ra (ENSMUSG00000027947) #10 She (ENSMUSG00000046280) #11 Ube2q1 (ENSMUSG00000042572) #12 Chrnb2 (ENSMUSG00000027950) #13 Adar (ENSMUSG00000027951) #14 Kcnn3 (ENSMUSG00000000794) #15 Pmvk (ENSMUSG00000027952) #16 Pbxip1 (ENSMUSG00000042613) #17 Pygo2 (ENSMUSG00000047824) #18 Shc1 (ENSMUSG00000042626) #19 Cks1b (ENSMUSG00000028044) Flad1 (ENSMUSG00000042642) #20 Lenep (ENSMUSG00000078173) #21 Zbtb7b (ENSMUSG00000028042) #22 Dcst2 (ENSMUSG00000109293) #23 Dcst1 (ENSMUSG00000042672) #24 Adam15 (ENSMUSG00000028041) #25 Efna4 (ENSMUSG00000028040) #26 Efna3 (ENSMUSG00000028039) #27 Efna1 (ENSMUSG00000027954) #28 Slc50a1 (ENSMUSG00000027953) #29 Dpm3 (ENSMUSG00000042737) #30 Krtcap2 (ENSMUSG00000042747) #31 Trim46 (ENSMUSG00000042766) #32 Muc1 (ENSMUSG00000042784) #33 Thbs3 (ENSMUSG00000028047) #34 Mtx1 (ENSMUSG00000064068) #35 Gba (ENSMUSG00000028048) #36 Entrep3 (ENSMUSG00000032657) #37 Ryukyu mouse MODERN SPECIES 12 Hax1 (MGP_CAROLIEiJ_G0025221) #8 Atp8b2 (MGP_CAROLIEiJ_G0025220) #9 Il6ra (MGP_CAROLIEiJ_G0025219) #10 She (MGP_CAROLIEiJ_G0025218) #11 Ube2q1 (MGP_CAROLIEiJ_G0025217) #12 MGP_CAROLIEiJ_G0025216 #13 Adar (MGP_CAROLIEiJ_G0025215) #14 Kcnn3 (MGP_CAROLIEiJ_G0025214) #15 Pmvk (MGP_CAROLIEiJ_G0025213) #16 Pbxip1 (MGP_CAROLIEiJ_G0025212) #17 Pygo2 (MGP_CAROLIEiJ_G0025211) #18 Shc1 (MGP_CAROLIEiJ_G0025210) #19 MGP_CAROLIEiJ_G0025209 Flad1 (MGP_CAROLIEiJ_G0025208) #20 Lenep (MGP_CAROLIEiJ_G0025207) #21 Zbtb7b (MGP_CAROLIEiJ_G0025206) #22 MGP_CAROLIEiJ_G0025205 #23 Dcst1 (MGP_CAROLIEiJ_G0025204) #24 Adam15 (MGP_CAROLIEiJ_G0025203) #25 Efna4 (MGP_CAROLIEiJ_G0025202) #26 Efna3 (MGP_CAROLIEiJ_G0025201) #27 Efna1 (MGP_CAROLIEiJ_G0025200) #28 Slc50a1 (MGP_CAROLIEiJ_G0025199) #29 Dpm3 (MGP_CAROLIEiJ_G0025198) #30 Krtcap2 (MGP_CAROLIEiJ_G0025197) #31 Trim46 (MGP_CAROLIEiJ_G0025196) #32 Muc1 (MGP_CAROLIEiJ_G0025195) #33 Thbs3 (MGP_CAROLIEiJ_G0025194) #34 Mtx1 (MGP_CAROLIEiJ_G0025193) #35 Gba (MGP_CAROLIEiJ_G0025192) #36 Entrep3 (MGP_CAROLIEiJ_G0025191) #37 Shrew mouse MODERN SPECIES 17 MGP_PahariEiJ_G0026665 #8 Atp8b2 (MGP_PahariEiJ_G0026664) #9 Il6ra (MGP_PahariEiJ_G0026663) #10 She (MGP_PahariEiJ_G0026662) #11 Ube2q1 (MGP_PahariEiJ_G0026661) #12 MGP_PahariEiJ_G0026660 #13 Adar (MGP_PahariEiJ_G0026659) #14 Kcnn3 (MGP_PahariEiJ_G0026658) #15 Pmvk (MGP_PahariEiJ_G0026657) #16 Pbxip1 (MGP_PahariEiJ_G0026656) #17 Pygo2 (MGP_PahariEiJ_G0026655) #18 Shc1 (MGP_PahariEiJ_G0026654) #19 Cks1b (MGP_PahariEiJ_G0026653) Lenep (MGP_PahariEiJ_G0026652) #21 Flad1 (MGP_PahariEiJ_G0026651) #20 Zbtb7b (MGP_PahariEiJ_G0026650) #22 MGP_PahariEiJ_G0026649 #23 Dcst1 (MGP_PahariEiJ_G0026648) #24 Adam15 (MGP_PahariEiJ_G0026647) #25 Efna4 (MGP_PahariEiJ_G0026646) #26 Efna3 (MGP_PahariEiJ_G0026645) #27 Efna1 (MGP_PahariEiJ_G0026644) #28 Slc50a1 (MGP_PahariEiJ_G0026643) #29 Dpm3 (MGP_PahariEiJ_G0026642) #30 Krtcap2 (MGP_PahariEiJ_G0026641) #31 Trim46 (MGP_PahariEiJ_G0026640) #32 Muc1 (MGP_PahariEiJ_G0026639) #33 Thbs3 (MGP_PahariEiJ_G0026638) #34 Mtx1 (MGP_PahariEiJ_G0026637) #35 MGP_PahariEiJ_G0026636 #36 Entrep3 (MGP_PahariEiJ_G0026635) #37 Mus ANCESTRAL SPECIES ENSGT00940000160219.s.b ##22 Mus_A ANCESTRAL SPECIES ENSGT00940000160219.s.b ##22 Mus_B ANCESTRAL SPECIES ENSGT00940000160219.s.b ##22 Mus_C ANCESTRAL SPECIES ENSGT00940000160219.s.b ##22 spretus MODERN SPECIES 4 Pou6f2 (MGP_SPRETEiJ_G0019105) Yae1d1 (MGP_SPRETEiJ_G0019104) Rala (MGP_SPRETEiJ_G0019103) Cdk13 (MGP_SPRETEiJ_G0019102) MGP_SPRETEiJ_G0019101 Inhba (MGP_SPRETEiJ_G0019100) Gli3 (MGP_SPRETEiJ_G0019099) AW209491 (MGP_SPRETEiJ_G0019098) Psma2 (MGP_SPRETEiJ_G0019097) Mrpl32 (MGP_SPRETEiJ_G0019096) Hecw1 (MGP_SPRETEiJ_G0019095) Arid4b (MGP_SPRETEiJ_G0019094) MGP_SPRETEiJ_G0019093 Tbce (MGP_SPRETEiJ_G0019092) B3galnt2 (MGP_SPRETEiJ_G0019091) MGP_SPRETEiJ_G0019090 ##22 Gng4 (MGP_SPRETEiJ_G0019089) Lyst (MGP_SPRETEiJ_G0019088) MGP_SPRETEiJ_G0019087 Nid1 (MGP_SPRETEiJ_G0019086) Gpr137b (MGP_SPRETEiJ_G0019085) Ero1b (MGP_SPRETEiJ_G0019084) Edaradd (MGP_SPRETEiJ_G0019083) Lgals8 (MGP_SPRETEiJ_G0019082) Heatr1 (MGP_SPRETEiJ_G0019081) Actn2 (MGP_SPRETEiJ_G0019080) Mtr (MGP_SPRETEiJ_G0019079) Ryr2 (MGP_SPRETEiJ_G0019078) Chrm3 (MGP_SPRETEiJ_G0019077) Zmynd11 (MGP_SPRETEiJ_G0019076) Dip2c (MGP_SPRETEiJ_G0019075) Steppe mouse MODERN SPECIES 35 Hecw1 (ENSMSIG00000017159) ENSMSIG00000017216 Arid4b (ENSMSIG00000017230) Ggps1 (ENSMSIG00000017308) Tbce (ENSMSIG00000017330) B3galnt2 (ENSMSIG00000017362) ENSMSIG00000017641 ##22 Gng4 (ENSMSIG00000017646) Shrew mouse MODERN SPECIES 7 Yae1d1 (MGP_PahariEiJ_G0019298) Rala (MGP_PahariEiJ_G0019297) Cdk13 (MGP_PahariEiJ_G0019296) MGP_PahariEiJ_G0019295 MGP_PahariEiJ_G0019294 Sugct (MGP_PahariEiJ_G0019293) Inhba (MGP_PahariEiJ_G0019292) Gli3 (MGP_PahariEiJ_G0019291) AW209491 (MGP_PahariEiJ_G0019290) Psma2 (MGP_PahariEiJ_G0019289) Mrpl32 (MGP_PahariEiJ_G0019288) Hecw1 (MGP_PahariEiJ_G0019287) Arid4b (MGP_PahariEiJ_G0019286) Ggps1 (MGP_PahariEiJ_G0019285) MGP_PahariEiJ_G0019284 MGP_PahariEiJ_G0019283 ##22 B3galnt2 (MGP_PahariEiJ_G0019282) Gng4 (MGP_PahariEiJ_G0019281) Lyst (MGP_PahariEiJ_G0019280) MGP_PahariEiJ_G0019279 Nid1 (MGP_PahariEiJ_G0019278) Gpr137b (MGP_PahariEiJ_G0019277) Ero1b (MGP_PahariEiJ_G0019276) Edaradd (MGP_PahariEiJ_G0019275) Lgals8 (MGP_PahariEiJ_G0019274) Heatr1 (MGP_PahariEiJ_G0019273) Actn2 (MGP_PahariEiJ_G0019272) Mtr (MGP_PahariEiJ_G0019271) Ryr2 (MGP_PahariEiJ_G0019270) Chrm3 (MGP_PahariEiJ_G0019269) MGP_PahariEiJ_G0019268 Mus ANCESTRAL SPECIES ENSGT00940000160219.t ##22 Mus_A ANCESTRAL SPECIES ENSGT00940000160219.t ##22 Ryukyu mouse MODERN SPECIES 4 Yae1d1 (MGP_CAROLIEiJ_G0018248) Rala (MGP_CAROLIEiJ_G0018247) Cdk13 (MGP_CAROLIEiJ_G0018246) MGP_CAROLIEiJ_G0018245 MGP_CAROLIEiJ_G0018244 Sugct (MGP_CAROLIEiJ_G0018243) Inhba (MGP_CAROLIEiJ_G0018242) Gli3 (MGP_CAROLIEiJ_G0018241) AW209491 (MGP_CAROLIEiJ_G0018240) Psma2 (MGP_CAROLIEiJ_G0018239) Mrpl32 (MGP_CAROLIEiJ_G0018238) Hecw1 (MGP_CAROLIEiJ_G0018237) Arid4b (MGP_CAROLIEiJ_G0018236) Ggps1 (MGP_CAROLIEiJ_G0018235) Tbce (MGP_CAROLIEiJ_G0018234) MGP_CAROLIEiJ_G0018233 ##22 B3galnt2 (MGP_CAROLIEiJ_G0018232) Gng4 (MGP_CAROLIEiJ_G0018231) Lyst (MGP_CAROLIEiJ_G0018230) MGP_CAROLIEiJ_G0018229 Nid1 (MGP_CAROLIEiJ_G0018228) Gpr137b (MGP_CAROLIEiJ_G0018227) Ero1b (MGP_CAROLIEiJ_G0018226) Edaradd (MGP_CAROLIEiJ_G0018225) Lgals8 (MGP_CAROLIEiJ_G0018224) Heatr1 (MGP_CAROLIEiJ_G0018223) Actn2 (MGP_CAROLIEiJ_G0018222) Mtr (MGP_CAROLIEiJ_G0018221) Ryr2 (MGP_CAROLIEiJ_G0018220) Chrm3 (MGP_CAROLIEiJ_G0018219) MGP_CAROLIEiJ_G0018218 Rat MODERN SPECIES 11 Aqp10 (ENSRNOG00000069352) Atp8b2 (ENSRNOG00000020822) #9 Il6r (ENSRNOG00000020811) #10 She (ENSRNOG00000020797) #11 Ube2q1 (ENSRNOG00000020791) #12 Chrnb2 (ENSRNOG00000020778) #13 Adar (ENSRNOG00000020744) #14 Kcnn3 (ENSRNOG00000020706) #15 Pmvk (ENSRNOG00000020696) #16 Pbxip1 (ENSRNOG00000020673) #17 Pygo2 (ENSRNOG00000020663) #18 Shc1 (ENSRNOG00000020657) #19 Cks1b (ENSRNOG00000042561) Lenep (ENSRNOG00000049513) #21 Flad1 (ENSRNOG00000020642) #20 Zbtb7b (ENSRNOG00000020640) #22 Dcst2 (ENSRNOG00000058618) #23 Dcst1 (ENSRNOG00000020621) #24 Adam15 (ENSRNOG00000020590) #25 Efna4 (ENSRNOG00000020588) #26 Efna3 (ENSRNOG00000057322) #27 Efna1 (ENSRNOG00000020573) #28 Slc50a1 (ENSRNOG00000020554) #29 Dpm3 (ENSRNOG00000065280) #30 Krtcap2 (ENSRNOG00000020542) #31 Trim46 (ENSRNOG00000055433) #32 Muc1 (ENSRNOG00000020539) #33 Thbs3 (ENSRNOG00000059903) #34 Mtx1 (ENSRNOG00000042977) #35 Gba (ENSRNOG00000049281) #36 Entrep3 (ENSRNOG00000020518) #37