Hystricomorpha	ANCESTRAL SPECIES	45	ENSGT00940000162648 #7	ENSGT00940000160804 #8	ENSGT00940000161919 #9	ENSGT00940000159107 #11	ENSGT00940000160166 #12	ENSGT00940000158417.b #13	ENSGT00940000157243 #14	ENSGT00950000182904.a.a.a #15	ENSGT00390000014801 #16	ENSGT00940000162147 #17	ENSGT00530000063948.a #18	ENSGT00950000182870.a.a.b #19	ENSGT00950000182971.B.b.c.a.b #20	ENSGT00390000007266 #21	ENSGT00390000002996	ENSGT00940000160219 #22	ENSGT00940000153269.a.a #23	ENSGT00940000153269.a.b #24	ENSGT00940000159822 #25	ENSGT00940000162071 #26	ENSGT00940000161355 #27	ENSGT00940000159919 #28	ENSGT00390000007801 #29	ENSGT00390000008892 #30	ENSGT00390000003552 #31	ENSGT00940000158021 #32	ENSGT00710000106874 #33	ENSGT00940000159283.d #34	ENSGT00950000182919.B.a	ENSGT00390000009464 #36	ENSGT00530000063335.B.a.a #37
Hystricomorpha_a	ANCESTRAL SPECIES	54	ENSGT00940000162648 #7	ENSGT00940000160804 #8	ENSGT00940000161919 #9	ENSGT00940000159107 #11	ENSGT00940000160166 #12	ENSGT00940000158417.b #13	ENSGT00940000157243 #14	ENSGT00950000182904.a.a.a #15	ENSGT00390000014801 #16	ENSGT00940000162147 #17	ENSGT00530000063948.a #18	ENSGT00950000182870.a.a.b #19	ENSGT00950000182971.B.b.c.a.b #20	ENSGT00390000007266 #21	ENSGT00390000002996	ENSGT00940000160219 #22	ENSGT00940000153269.a.a #23	ENSGT00940000153269.a.b #24	ENSGT00940000159822 #25	ENSGT00940000162071 #26	ENSGT00940000161355 #27	ENSGT00940000159919 #28	ENSGT00390000007801 #29	ENSGT00390000008892 #30	ENSGT00390000003552 #31	ENSGT00940000158021 #32	ENSGT00710000106874 #33	ENSGT00940000159283.d #34	ENSGT00960000188642 #35	ENSGT00390000009464 #36	ENSGT00530000063335.B.a.a #37
Hystricomorpha_b	ANCESTRAL SPECIES	61	ENSGT00940000162648 #7	ENSGT00940000160804 #8	ENSGT00940000161919 #9	ENSGT00940000159107 #11	ENSGT00940000160166 #12	ENSGT00940000158417.b #13	ENSGT00940000157243 #14	ENSGT00950000182904.a.a.a #15	ENSGT00390000014801 #16	ENSGT00940000162147 #17	ENSGT00530000063948.a #18	ENSGT00950000182870.a.a.b #19	ENSGT00950000182971.B.b.c.a.b #20	ENSGT00390000007266 #21	ENSGT00390000002996	ENSGT00940000160219 #22	ENSGT00940000153269.a.a #23	ENSGT00940000153269.a.b #24	ENSGT00940000159822 #25	ENSGT00940000162071 #26	ENSGT00940000161355 #27	ENSGT00940000159919 #28	ENSGT00390000007801 #29	ENSGT00390000008892 #30	ENSGT00390000003552 #31	ENSGT00940000158021 #32	ENSGT00710000106874 #33	ENSGT00940000159283.d #34	ENSGT00960000188642 #35	ENSGT00390000009464 #36	ENSGT00530000063335.B.a.a #37
Long-tailed chinchilla	MODERN SPECIES	252	AQP10 (ENSCLAG00000004886) #7	ATP8B2 (ENSCLAG00000003593) #8	IL6R (ENSCLAG00000004093) #9	ENSCLAG00000004750 #10	SHE (ENSCLAG00000004987) #11	UBE2Q1 (ENSCLAG00000005048) #12	CHRNB2 (ENSCLAG00000005132) #13	ADAR (ENSCLAG00000005402) #14	KCNN3 (ENSCLAG00000004330) #15	PMVK (ENSCLAG00000004787) #16	PBXIP1 (ENSCLAG00000004914) #17	PYGO2 (ENSCLAG00000004985) #18	SHC1 (ENSCLAG00000005022) #19	CKS1B (ENSCLAG00000005125) #20	FLAD1 (ENSCLAG00000005583) #21	ZBTB7B (ENSCLAG00000005645) #22	DCST2 (ENSCLAG00000006131) #23	DCST1 (ENSCLAG00000006280) #24	ADAM15 (ENSCLAG00000002903) #25	EFNA4 (ENSCLAG00000003250) #26	EFNA3 (ENSCLAG00000003364) #27	EFNA1 (ENSCLAG00000003890) #28	SLC50A1 (ENSCLAG00000004084) #29	DPM3 (ENSCLAG00000004033) #30	ENSCLAG00000004535 #31	TRIM46 (ENSCLAG00000003999) #32	ENSCLAG00000004137 #33	THBS3 (ENSCLAG00000004613) #34	ENSCLAG00000005120 #35	GBA1 (ENSCLAG00000005452) #36	ENTREP3 (ENSCLAG00000003287) #37
Degu	MODERN SPECIES	73	ATP8B2 (ENSODEG00000010646) #8	SHE (ENSODEG00000010544) #11	UBE2Q1 (ENSODEG00000012607) #12	ENSODEG00000020162	CHRNB2 (ENSODEG00000011916) #13	ADAR (ENSODEG00000011111) #14	KCNN3 (ENSODEG00000011444) #15	PMVK (ENSODEG00000011395) #16	PBXIP1 (ENSODEG00000011532) #17	PYGO2 (ENSODEG00000012415) #18	SHC1 (ENSODEG00000011945) #19	CKS1B (ENSODEG00000011374) #20	ENSODEG00000011816	FLAD1 (ENSODEG00000012292) #21	LENEP (ENSODEG00000020151)	ENSODEG00000011355 #22	DCST2 (ENSODEG00000010995) #23	DCST1 (ENSODEG00000013821) #24	ADAM15 (ENSODEG00000010841) #25	EFNA4 (ENSODEG00000011663) #26	EFNA3 (ENSODEG00000010457) #27	EFNA1 (ENSODEG00000010045) #28	SLC50A1 (ENSODEG00000009906) #29	DPM3 (ENSODEG00000019810) #30	ENSODEG00000010582 #31	TRIM46 (ENSODEG00000010418) #32	ENSODEG00000009984 #33	THBS3 (ENSODEG00000009938) #34	ENSODEG00000011167 #35	GBA1 (ENSODEG00000010430) #36	ENTREP3 (ENSODEG00000010722) #37
Guinea pig	MODERN SPECIES	10	ENSCPOG00000037176	IL6R (ENSCPOG00000033327) #9	SHE (ENSCPOG00000001163) #11	UBE2Q1 (ENSCPOG00000001472) #12	ENSCPOG00000013155 #13	ADAR (ENSCPOG00000005463) #14	ENSCPOG00000020156 #13	KCNN3 (ENSCPOG00000015718) #15	PMVK (ENSCPOG00000006036) #16	PBXIP1 (ENSCPOG00000005112) #17	PYGO2 (ENSCPOG00000038298) #18	SHC1 (ENSCPOG00000024934) #19	CKS1B (ENSCPOG00000038831) #20	FLAD1 (ENSCPOG00000036462) #21	LENEP (ENSCPOG00000005114)	ZBTB7B (ENSCPOG00000019491) #22	DCST2 (ENSCPOG00000023952) #23	DCST1 (ENSCPOG00000001145) #24	ADAM15 (ENSCPOG00000001148) #25	EFNA4 (ENSCPOG00000036812) #26	EFNA3 (ENSCPOG00000001152) #27	EFNA1 (ENSCPOG00000039989) #28	SLC50A1 (ENSCPOG00000037766) #29	DPM3 (ENSCPOG00000019638) #30	KRTCAP2 (ENSCPOG00000030898) #31	TRIM46 (ENSCPOG00000022179) #32	ENSCPOG00000034833 #33	THBS3 (ENSCPOG00000003165) #34	ENSCPOG00000024733 #35	GBA1 (ENSCPOG00000003173) #36	ENTREP3 (ENSCPOG00000003175) #37
Naked mole-rat female	MODERN SPECIES	10	AQP10 (ENSHGLG00000018126) #7	ATP8B2 (ENSHGLG00000018554) #8	IL6R (ENSHGLG00000032250) #9	ENSHGLG00000035218 #11	ENSHGLG00000007304 #12	CHRNB2 (ENSHGLG00000007150) #13	ADAR (ENSHGLG00000017910) #14	ENSHGLG00000021095	KCNN3 (ENSHGLG00000015775) #15	PMVK (ENSHGLG00000009156) #16	PBXIP1 (ENSHGLG00000008141) #17	PYGO2 (ENSHGLG00000007163) #18	ENSHGLG00000006430 #19	CKS1B (ENSHGLG00000005768) #20	FLAD1 (ENSHGLG00000005598) #21	ZBTB7B (ENSHGLG00000009408) #22	DCST2 (ENSHGLG00000007067) #23	DCST1 (ENSHGLG00000005842) #24	ADAM15 (ENSHGLG00000018549) #25	EFNA4 (ENSHGLG00000018504) #26	EFNA3 (ENSHGLG00000014477) #27	EFNA1 (ENSHGLG00000014389) #28	SLC50A1 (ENSHGLG00000011187) #29	DPM3 (ENSHGLG00000010719) #30	KRTCAP2 (ENSHGLG00000008900) #31	TRIM46 (ENSHGLG00000007900) #32	ENSHGLG00000031941 #33	THBS3 (ENSHGLG00000019451) #34	MTX1 (ENSHGLG00000017998)	GBA1 (ENSHGLG00000017983) #36	ENTREP3 (ENSHGLG00000016425) #37