Amniota	ANCESTRAL SPECIES	39	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000161202.b	ENSGT00940000160262	ENSGT00940000153981.B	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34
Mammalia	ANCESTRAL SPECIES	19	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Theria	ANCESTRAL SPECIES	36	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Eutheria	ANCESTRAL SPECIES		ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Glires	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Rodentia	ANCESTRAL SPECIES		ENSGT00860000135887	ENSGT00940000165268	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT00860000135887	ENSGT00940000165268	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Sciuridae	ANCESTRAL SPECIES	3	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Marmotini	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Alpin marmot	MODERN SPECIES	15	GJA9 (ENSMMMG00000003355) #7	ENSMMMG00000003363 #8	RRAGC (ENSMMMG00000003368) #9	UTP11 (ENSMMMG00000003393) #10	FHL3 (ENSMMMG00000003415) #11	SF3A3 (ENSMMMG00000003437) #12	INPP5B (ENSMMMG00000003529) #13	MTF1 (ENSMMMG00000005593) #14	ENSMMMG00000005905 #15	YRDC (ENSMMMG00000005923) #16	MANEAL (ENSMMMG00000005925) #17	ENSMMMG00000005932 #18	ENSMMMG00000005943 #19	CDCA8 (ENSMMMG00000005956) #20	C1orf109 (ENSMMMG00000006007) #21	RSPO1 (ENSMMMG00000006021) #22	GNL2 (ENSMMMG00000006031) #23	DNALI1 (ENSMMMG00000006059) #24	SNIP1 (ENSMMMG00000006068) #25	ZC3H12A (ENSMMMG00000006073) #26	GRIK3 (ENSMMMG00000006114) #27	ENSMMMG00000006132 #28	CSF3R (ENSMMMG00000006145) #29	MRPS15 (ENSMMMG00000006160) #30	ENSMMMG00000006174 #31	LSM10 (ENSMMMG00000006179) #32	STK40 (ENSMMMG00000006181) #33	EVA1B (ENSMMMG00000006211) #34	SH3D21 (ENSMMMG00000006222) #35	THRAP3 (ENSMMMG00000006271) #36	MAP7D1 (ENSMMMG00000006325) #37
Marmotini_b	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Arctic ground squirrel	MODERN SPECIES	120	MYCBP (ENSUPAG00010016841) #8	RRAGC (ENSUPAG00010016855) #9	POU3F1 (ENSUPAG00010016876)	UTP11 (ENSUPAG00010016879) #10	FHL3 (ENSUPAG00010016892) #11	SF3A3 (ENSUPAG00010016898) #12	INPP5B (ENSUPAG00010016932) #13	MTF1 (ENSUPAG00010017110) #14	C1orf122 (ENSUPAG00010017170)	YRDC (ENSUPAG00010017183) #16	MANEAL (ENSUPAG00010017206) #17	ENSUPAG00010017214 #19	ENSUPAG00010017225 #19	CDCA8 (ENSUPAG00010017236) #20	C1orf109 (ENSUPAG00010017276) #21	RSPO1 (ENSUPAG00010017283) #22	ENSUPAG00010017290	DNALI1 (ENSUPAG00010017332) #24	SNIP1 (ENSUPAG00010017338) #25	MEAF6 (ENSUPAG00010017344)	ZC3H12A (ENSUPAG00010017379) #26	GRIK3 (ENSUPAG00010017396) #27	CSF3R (ENSUPAG00010017417) #29	MRPS15 (ENSUPAG00010017437) #30	OSCP1 (ENSUPAG00010017454) #31	ENSUPAG00010017484 #32	STK40 (ENSUPAG00010017491) #33	EVA1B (ENSUPAG00010017508) #34	SH3D21 (ENSUPAG00010017516) #35	THRAP3 (ENSUPAG00010017531) #36	MAP7D1 (ENSUPAG00010017568) #37
Squirrel	MODERN SPECIES	74	GJA9 (ENSSTOG00000027990) #7	MYCBP (ENSSTOG00000021547) #8	RRAGC (ENSSTOG00000011043) #9	UTP11 (ENSSTOG00000022805) #10	FHL3 (ENSSTOG00000024538) #11	SF3A3 (ENSSTOG00000001691) #12	INPP5B (ENSSTOG00000001670) #13	MTF1 (ENSSTOG00000025276) #14	C1orf122 (ENSSTOG00000024011)	YRDC (ENSSTOG00000001643) #16	MANEAL (ENSSTOG00000001640) #17	ENSSTOG00000031171 #19	ENSSTOG00000005714 #19	CDCA8 (ENSSTOG00000000833) #20	C1orf109 (ENSSTOG00000000834) #21	RSPO1 (ENSSTOG00000005254) #22	GNL2 (ENSSTOG00000005217) #23	DNALI1 (ENSSTOG00000005196) #24	SNIP1 (ENSSTOG00000025511) #25	MEAF6 (ENSSTOG00000005166)	ZC3H12A (ENSSTOG00000026842) #26	GRIK3 (ENSSTOG00000010632) #27	CSF3R (ENSSTOG00000000615) #29	MRPS15 (ENSSTOG00000000608) #30	OSCP1 (ENSSTOG00000000607) #31	LSM10 (ENSSTOG00000000606) #32	STK40 (ENSSTOG00000027085) #33	EVA1B (ENSSTOG00000023164) #34	THRAP3 (ENSSTOG00000000602) #36	MAP7D1 (ENSSTOG00000010274) #37	TRAPPC3 (ENSSTOG00000010270)
Eurasian red squirrel	MODERN SPECIES		GJA9 (ENSSVLG00005003263) #7	ENSSVLG00005003250	ENSSVLG00005003228 #9	POU3F1 (ENSSVLG00005003210)	UTP11 (ENSSVLG00005003193) #10	FHL3 (ENSSVLG00005003179) #11	SF3A3 (ENSSVLG00005003142) #12	ENSSVLG00005002913 #13	MTF1 (ENSSVLG00005002841) #14	C1orf122 (ENSSVLG00005002816)	YRDC (ENSSVLG00005002793) #16	MANEAL (ENSSVLG00005002768) #17	EPHA10 (ENSSVLG00005002692) #19	CDCA8 (ENSSVLG00005002670) #20	C1orf109 (ENSSVLG00005002644) #21	RSPO1 (ENSSVLG00005002610) #22	GNL2 (ENSSVLG00005002574) #23	DNALI1 (ENSSVLG00005002552) #24	SNIP1 (ENSSVLG00005002539) #25	MEAF6 (ENSSVLG00005002483)	ZC3H12A (ENSSVLG00005002445) #26	GRIK3 (ENSSVLG00005002397) #27	CSF3R (ENSSVLG00005002340) #29	MRPS15 (ENSSVLG00005002313) #30	OSCP1 (ENSSVLG00005002261) #31	LSM10 (ENSSVLG00005002235) #32	STK40 (ENSSVLG00005002214) #33	EVA1B (ENSSVLG00005002184) #34	ENSSVLG00005002157 #35	ENSSVLG00005002147	THRAP3 (ENSSVLG00005002113) #36
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000017974.u.b #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000017974.u.b #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00390000017974.u.b #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Long-tailed chinchilla	MODERN SPECIES	159	ENSCLAG00000010129 #8	ENSCLAG00000009189	RRAGC (ENSCLAG00000014225) #9	UTP11 (ENSCLAG00000012521) #10	FHL3 (ENSCLAG00000010530) #11	SF3A3 (ENSCLAG00000010838) #12	INPP5B (ENSCLAG00000009211) #13	MTF1 (ENSCLAG00000009885) #14	C1orf122 (ENSCLAG00000007899)	YRDC (ENSCLAG00000015012) #16	MANEAL (ENSCLAG00000010901) #17	ENSCLAG00000008506 #19	ENSCLAG00000011620 #19	CDCA8 (ENSCLAG00000010581) #20	C1orf109 (ENSCLAG00000008471) #21	RSPO1 (ENSCLAG00000016364) #22	GNL2 (ENSCLAG00000012504) #23	DNALI1 (ENSCLAG00000014051) #24	SNIP1 (ENSCLAG00000014140) #25	MEAF6 (ENSCLAG00000011410)	ZC3H12A (ENSCLAG00000008722) #26	GRIK3 (ENSCLAG00000012617) #27	CSF3R (ENSCLAG00000013775) #29	MRPS15 (ENSCLAG00000015562) #30	OSCP1 (ENSCLAG00000008808) #31	LSM10 (ENSCLAG00000008633) #32	STK40 (ENSCLAG00000008274) #33	EVA1B (ENSCLAG00000012665) #34	ENSCLAG00000014941 #35	THRAP3 (ENSCLAG00000013043) #36	MAP7D1 (ENSCLAG00000011145) #37
Degu	MODERN SPECIES	171	ENSODEG00000007175	RRAGC (ENSODEG00000006831) #9	ENSODEG00000019423	POU3F1 (ENSODEG00000006688)	ENSODEG00000006050 #10	FHL3 (ENSODEG00000006118) #11	ENSODEG00000007470 #12	INPP5B (ENSODEG00000007989) #13	ENSODEG00000007031	C1orf122 (ENSODEG00000006893)	YRDC (ENSODEG00000007401) #16	MANEAL (ENSODEG00000007218) #17	ENSODEG00000008311	EPHA10 (ENSODEG00000005704) #19	CDCA8 (ENSODEG00000005939) #20	RSPO1 (ENSODEG00000005377) #22	ENSODEG00000005679	DNALI1 (ENSODEG00000006719) #24	SNIP1 (ENSODEG00000005648) #25	ENSODEG00000007741	ZC3H12A (ENSODEG00000005643) #26	ENSODEG00000019238	GRIK3 (ENSODEG00000005952) #27	CSF3R (ENSODEG00000006285) #29	MRPS15 (ENSODEG00000005390) #30	OSCP1 (ENSODEG00000005227) #31	LSM10 (ENSODEG00000019161) #32	STK40 (ENSODEG00000005380) #33	EVA1B (ENSODEG00000006459) #34	SH3D21 (ENSODEG00000005155) #35	ENSODEG00000006090 #36
Guinea pig	MODERN SPECIES	25												ENSCPOG00000004479 #19	ENSCPOG00000040734 #19	CDCA8 (ENSCPOG00000001228) #20	C1orf109 (ENSCPOG00000001227) #21	RSPO1 (ENSCPOG00000038977) #22	GNL2 (ENSCPOG00000026804) #23	DNALI1 (ENSCPOG00000011086) #24	SNIP1 (ENSCPOG00000011083) #25	MEAF6 (ENSCPOG00000025988)	ZC3H12A (ENSCPOG00000011081) #26	GRIK3 (ENSCPOG00000025605) #27	CSF3R (ENSCPOG00000010879) #29	MRPS15 (ENSCPOG00000010877) #30	OSCP1 (ENSCPOG00000010874) #31	LSM10 (ENSCPOG00000039302) #32	STK40 (ENSCPOG00000027226) #33	EVA1B (ENSCPOG00000020754) #34	THRAP3 (ENSCPOG00000015742) #36	ENSCPOG00000037255	MAP7D1 (ENSCPOG00000000559) #37
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000010032	RHBDL2 (ENSHGLG00000035014)	MYCBP (ENSHGLG00000049839) #8	RRAGC (ENSHGLG00000016185) #9	POU3F1 (ENSHGLG00000034082)	UTP11L (ENSHGLG00000037948) #10	FHL3 (ENSHGLG00000014086) #11	SF3A3 (ENSHGLG00000012502) #12	INPP5B (ENSHGLG00000011716) #13	MTF1 (ENSHGLG00000010430) #14	ENSHGLG00000014495	EPHA10 (ENSHGLG00000014075) #19	ENSHGLG00000013051 #17	ENSHGLG00000012308 #20	C1orf109 (ENSHGLG00000043434) #21	RSPO1 (ENSHGLG00000014006) #22	GNL2 (ENSHGLG00000013728) #23	DNALI1 (ENSHGLG00000012722) #24	SNIP1 (ENSHGLG00000045104) #25	MEAF6 (ENSHGLG00000013675)	ZC3H12A (ENSHGLG00000012808) #26	ENSHGLG00000046483	GRIK3 (ENSHGLG00000011776) #27	CSF3R (ENSHGLG00000010743) #29	ENSHGLG00000044262	ENSHGLG00000047064 #30	OSCP1 (ENSHGLG00000011822) #31	ENSHGLG00000011625 #32	STK40 (ENSHGLG00000010896) #33	ENSHGLG00000035766 #34	ENSHGLG00000011928
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Muroidea	ANCESTRAL SPECIES	3	ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Mus	ANCESTRAL SPECIES	3	ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a.f #36	ENSGT00950000182941.a.a.b #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a.f #36	ENSGT00950000182941.a.a.b #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000017974 #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a.f #36	ENSGT00950000182941.a.a.b #37
Steppe mouse	MODERN SPECIES	3362	ENSMSIG00000014896	Rragc (ENSMSIG00000014907) #9	ENSMSIG00000014950	Pou3f1 (ENSMSIG00000014969)	Utp11 (ENSMSIG00000014973) #10	Fhl3 (ENSMSIG00000015008) #11	Sf3a3 (ENSMSIG00000015045) #12	Inpp5b (ENSMSIG00000015112) #13	Mtf1 (ENSMSIG00000015251) #14	1110065P20Rik (ENSMSIG00000015284)	Yrdc (ENSMSIG00000015341) #16	Maneal (ENSMSIG00000015357) #17	Epha10 (ENSMSIG00000015368) #19	Cdca8 (ENSMSIG00000015423) #20	9930104L06Rik (ENSMSIG00000015482) #21	Rspo1 (ENSMSIG00000015498) #22	Gnl2 (ENSMSIG00000015516) #23	ENSMSIG00000015561 #24	Snip1 (ENSMSIG00000015594) #25	Meaf6 (ENSMSIG00000015611)	Zc3h12a (ENSMSIG00000015699) #26	Grik3 (ENSMSIG00000015725) #27	Csf3r (ENSMSIG00000015810) #29	Mrps15 (ENSMSIG00000015874) #30	Oscp1 (ENSMSIG00000015894) #31	Lsm10 (ENSMSIG00000016001) #32	Stk40 (ENSMSIG00000016008) #33	Eva1b (ENSMSIG00000016045) #34	Sh3d21 (ENSMSIG00000016082) #35	Thrap3 (ENSMSIG00000016164) #36	Map7d1 (ENSMSIG00000016217) #37
spretus	MODERN SPECIES	13	MGP_SPRETEiJ_G0027421	Mycbp (MGP_SPRETEiJ_G0027422) #8	Rragc (MGP_SPRETEiJ_G0027423) #9	MGP_SPRETEiJ_G0027424	Pou3f1 (MGP_SPRETEiJ_G0027425)	Utp11 (MGP_SPRETEiJ_G0027426) #10	Fhl3 (MGP_SPRETEiJ_G0027427) #11	Sf3a3 (MGP_SPRETEiJ_G0027428) #12	Inpp5b (MGP_SPRETEiJ_G0027429) #13	Mtf1 (MGP_SPRETEiJ_G0027430) #14	1110065P20Rik (MGP_SPRETEiJ_G0027431)	Yrdc (MGP_SPRETEiJ_G0027432) #16	Maneal (MGP_SPRETEiJ_G0027433) #17	Epha10 (MGP_SPRETEiJ_G0027434) #19	Cdca8 (MGP_SPRETEiJ_G0027435) #20	Rspo1 (MGP_SPRETEiJ_G0027436) #22	Gnl2 (MGP_SPRETEiJ_G0027437) #23	Dnali1 (MGP_SPRETEiJ_G0027438) #24	Snip1 (MGP_SPRETEiJ_G0027439) #25	Meaf6 (MGP_SPRETEiJ_G0027440)	Zc3h12a (MGP_SPRETEiJ_G0027441) #26	Grik3 (MGP_SPRETEiJ_G0027442) #27	Csf3r (MGP_SPRETEiJ_G0027443) #29	Mrps15 (MGP_SPRETEiJ_G0027444) #30	Oscp1 (MGP_SPRETEiJ_G0027445) #31	Lsm10 (MGP_SPRETEiJ_G0027446) #32	Stk40 (MGP_SPRETEiJ_G0027447) #33	Eva1b (MGP_SPRETEiJ_G0027448) #34	Sh3d21 (MGP_SPRETEiJ_G0027449) #35	Thrap3 (MGP_SPRETEiJ_G0027450) #36	Map7d1 (MGP_SPRETEiJ_G0027451) #37
Mouse	MODERN SPECIES	13	Rhbdl2 (ENSMUSG00000043333)	Mycbp (ENSMUSG00000028647) #8	Rragc (ENSMUSG00000028646) #9	Pou3f1 (ENSMUSG00000090125)	Utp11 (ENSMUSG00000028907) #10	Fhl3 (ENSMUSG00000032643) #11	Sf3a3 (ENSMUSG00000028902) #12	Inpp5b (ENSMUSG00000028894) #13	Mtf1 (ENSMUSG00000028890) #14	1110065P20Rik (ENSMUSG00000078570)	Yrdc (ENSMUSG00000028889) #16	Maneal (ENSMUSG00000042763) #17	Epha10 (ENSMUSG00000028876) #19	Cdca8 (ENSMUSG00000028873) #20	9930104L06Rik (ENSMUSG00000044730) #21	Rspo1 (ENSMUSG00000028871) #22	Gnl2 (ENSMUSG00000028869) #23	Dnali1 (ENSMUSG00000042707) #24	Snip1 (ENSMUSG00000050213) #25	Meaf6 (ENSMUSG00000028863)	Zc3h12a (ENSMUSG00000042677) #26	Grik3 (ENSMUSG00000001985) #27	Csf3r (ENSMUSG00000028859) #29	Mrps15 (ENSMUSG00000028861) #30	Oscp1 (ENSMUSG00000042616) #31	Lsm10 (ENSMUSG00000050188) #32	Stk40 (ENSMUSG00000042608) #33	Eva1b (ENSMUSG00000050212) #34	Sh3d21 (ENSMUSG00000073758) #35	Thrap3 (ENSMUSG00000043962) #36	Map7d1 (ENSMUSG00000028849) #37
Ryukyu mouse	MODERN SPECIES	13	MGP_CAROLIEiJ_G0026442 #8	Rragc (MGP_CAROLIEiJ_G0026443) #9	MGP_CAROLIEiJ_G0026444	MGP_CAROLIEiJ_G0026445	Pou3f1 (MGP_CAROLIEiJ_G0026446)	Utp11 (MGP_CAROLIEiJ_G0026447) #10	Fhl3 (MGP_CAROLIEiJ_G0026448) #11	Sf3a3 (MGP_CAROLIEiJ_G0026449) #12	Inpp5b (MGP_CAROLIEiJ_G0026450) #13	Mtf1 (MGP_CAROLIEiJ_G0026451) #14	1110065P20Rik (MGP_CAROLIEiJ_G0026452)	Yrdc (MGP_CAROLIEiJ_G0026453) #16	Maneal (MGP_CAROLIEiJ_G0026454) #17	Epha10 (MGP_CAROLIEiJ_G0026455) #19	Cdca8 (MGP_CAROLIEiJ_G0026456) #20	Rspo1 (MGP_CAROLIEiJ_G0026457) #22	Gnl2 (MGP_CAROLIEiJ_G0026458) #23	Dnali1 (MGP_CAROLIEiJ_G0026459) #24	Snip1 (MGP_CAROLIEiJ_G0026460) #25	Meaf6 (MGP_CAROLIEiJ_G0026461)	Zc3h12a (MGP_CAROLIEiJ_G0026462) #26	Grik3 (MGP_CAROLIEiJ_G0026463) #27	Csf3r (MGP_CAROLIEiJ_G0026464) #29	Mrps15 (MGP_CAROLIEiJ_G0026465) #30	Oscp1 (MGP_CAROLIEiJ_G0026466) #31	Lsm10 (MGP_CAROLIEiJ_G0026467) #32	Stk40 (MGP_CAROLIEiJ_G0026468) #33	Eva1b (MGP_CAROLIEiJ_G0026469) #34	Sh3d21 (MGP_CAROLIEiJ_G0026470) #35	MGP_CAROLIEiJ_G0026471 #36	Map7d1 (MGP_CAROLIEiJ_G0026472) #37
Shrew mouse	MODERN SPECIES	19	Mycbp (MGP_PahariEiJ_G0028773) #8	Rragc (MGP_PahariEiJ_G0028774) #9	MGP_PahariEiJ_G0028775	MGP_PahariEiJ_G0028776	Pou3f1 (MGP_PahariEiJ_G0028777)	Utp11 (MGP_PahariEiJ_G0028778) #10	Fhl3 (MGP_PahariEiJ_G0028779) #11	Sf3a3 (MGP_PahariEiJ_G0028780) #12	Inpp5b (MGP_PahariEiJ_G0028781) #13	Mtf1 (MGP_PahariEiJ_G0028782) #14	1110065P20Rik (MGP_PahariEiJ_G0028783)	Yrdc (MGP_PahariEiJ_G0028784) #16	Maneal (MGP_PahariEiJ_G0028785) #17	Epha10 (MGP_PahariEiJ_G0028786) #19	MGP_PahariEiJ_G0028787 #20	Rspo1 (MGP_PahariEiJ_G0028788) #22	Gnl2 (MGP_PahariEiJ_G0028789) #23	Dnali1 (MGP_PahariEiJ_G0028790) #24	Snip1 (MGP_PahariEiJ_G0028791) #25	Meaf6 (MGP_PahariEiJ_G0028792)	Zc3h12a (MGP_PahariEiJ_G0028793) #26	Grik3 (MGP_PahariEiJ_G0028794) #27	Csf3r (MGP_PahariEiJ_G0028795) #29	Mrps15 (MGP_PahariEiJ_G0028796) #30	Oscp1 (MGP_PahariEiJ_G0028797) #31	Lsm10 (MGP_PahariEiJ_G0028798) #32	Stk40 (MGP_PahariEiJ_G0028799) #33	Eva1b (MGP_PahariEiJ_G0028800) #34	MGP_PahariEiJ_G0028801 #35	MGP_PahariEiJ_G0028802 #36	Map7d1 (MGP_PahariEiJ_G0028803) #37
Rat	MODERN SPECIES	15	Mycbp (ENSRNOG00000065724) #8	Rragc (ENSRNOG00000017426) #9	Pou3f1 (ENSRNOG00000047686)	Utp11 (ENSRNOG00000007174) #10	Fhl3 (ENSRNOG00000007541) #11	Sf3a3 (ENSRNOG00000007629) #12	Inpp5b (ENSRNOG00000048506) #13	ENSRNOG00000066500	Mtf1 (ENSRNOG00000025724) #14	C5h1orf122 (ENSRNOG00000042421)	Yrdc (ENSRNOG00000025424) #16	Maneal (ENSRNOG00000025349) #17	Epha10 (ENSRNOG00000037340) #19	Cdca8 (ENSRNOG00000031431) #20	C5h1orf109 (ENSRNOG00000025065) #21	Rspo1 (ENSRNOG00000009656) #22	Gnl2 (ENSRNOG00000009430) #23	Dnali1 (ENSRNOG00000024957) #24	Snip1 (ENSRNOG00000024889) #25	Meaf6 (ENSRNOG00000009309)	Zc3h12a (ENSRNOG00000009131) #26	Grik3 (ENSRNOG00000008992) #27	ENSRNOG00000063670	Csf3r (ENSRNOG00000008759) #29	Mrps15 (ENSRNOG00000008279) #30	Oscp1 (ENSRNOG00000026978) #31	Lsm10 (ENSRNOG00000068296) #32	Stk40 (ENSRNOG00000025679) #33	Eva1b (ENSRNOG00000024818) #34	Sh3d21 (ENSRNOG00000024566) #35	Thrap3 (ENSRNOG00000009977) #36
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00520000061577	ENSGT00390000017974.s.b #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000017974.s.b #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00940000165942 #15	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Prairie vole	MODERN SPECIES	1	Rhbdl2 (ENSMOCG00000002795)	Mycbp (ENSMOCG00000015574) #8	Rragc (ENSMOCG00000014353) #9	ENSMOCG00000012010	Utp11 (ENSMOCG00000021894) #10	Fhl3 (ENSMOCG00000013490) #11	ENSMOCG00000019939 #12	Inpp5b (ENSMOCG00000017902) #13	Mtf1 (ENSMOCG00000007669) #14	1110065P20Rik (ENSMOCG00000012877)	ENSMOCG00000009295	Maneal (ENSMOCG00000021847) #17	Epha10 (ENSMOCG00000022678) #19	Cdca8 (ENSMOCG00000013240) #20	9930104L06Rik (ENSMOCG00000022276) #21	Rspo1 (ENSMOCG00000022465) #22	Gnl2 (ENSMOCG00000016365) #23	Dnali1 (ENSMOCG00000003328) #24	Snip1 (ENSMOCG00000008716) #25	Meaf6 (ENSMOCG00000019012)	Zc3h12a (ENSMOCG00000001899) #26	ENSMOCG00000009417	Grik3 (ENSMOCG00000009075) #27	Csf3r (ENSMOCG00000015592) #29	Mrps15 (ENSMOCG00000004474) #30	Oscp1 (ENSMOCG00000001484) #31	Lsm10 (ENSMOCG00000021943) #32	Stk40 (ENSMOCG00000019033) #33	Eva1b (ENSMOCG00000017606) #34	ENSMOCG00000015795	ENSMOCG00000005500 #36
Northern American deer mouse	MODERN SPECIES	11	Mycbp (ENSPEMG00000024417) #8	Rragc (ENSPEMG00000004170) #9	Pou3f1 (ENSPEMG00000026905)	Utp11 (ENSPEMG00000020923) #10	Fhl3 (ENSPEMG00000020662) #11	Sf3a3 (ENSPEMG00000020805) #12	Inpp5b (ENSPEMG00000021223) #13	Mtf1 (ENSPEMG00000021132) #14	ENSPEMG00000030619 #15	Yrdc (ENSPEMG00000016985) #16	Maneal (ENSPEMG00000021002) #17	ENSPEMG00000020548 #19	ENSPEMG00000027637 #19	Cdca8 (ENSPEMG00000022723) #20	9930104L06Rik (ENSPEMG00000022126) #21	Rspo1 (ENSPEMG00000021279) #22	Gnl2 (ENSPEMG00000021234) #23	Dnali1 (ENSPEMG00000020987) #24	Snip1 (ENSPEMG00000021090) #25	Meaf6 (ENSPEMG00000023877)	Zc3h12a (ENSPEMG00000024080) #26	Grik3 (ENSPEMG00000020816) #27	Csf3r (ENSPEMG00000021902) #29	Mrps15 (ENSPEMG00000022897) #30	Oscp1 (ENSPEMG00000021248) #31	Lsm10 (ENSPEMG00000029690) #32	Stk40 (ENSPEMG00000010968) #33	Eva1b (ENSPEMG00000017056) #34	Sh3d21 (ENSPEMG00000022518) #35	Thrap3 (ENSPEMG00000023512) #36	Map7d1 (ENSPEMG00000018714) #37
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00390000017974.t #8	ENSGT00860000135887	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b.f #33	ENSGT00950000182986.b.e #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Chinese hamster chok1gshd	MODERN SPECIES	111	ENSCGRG00001004752	ENSCGRG00001000989 #9	ENSCGRG00001025020	Pou3f1 (ENSCGRG00001004375)	Utp11 (ENSCGRG00001024839) #10	Fhl3 (ENSCGRG00001024120) #11	Sf3a3 (ENSCGRG00001011320) #12	Inpp5b (ENSCGRG00001013248) #13	Mtf1 (ENSCGRG00001011213) #14	1110065P20Rik (ENSCGRG00001015075)	ENSCGRG00001014496 #16	Maneal (ENSCGRG00001013857) #17	Epha10 (ENSCGRG00001016839) #19	Cdca8 (ENSCGRG00001009411) #20	9930104L06Rik (ENSCGRG00001024913) #21	Rspo1 (ENSCGRG00001017490) #22	Gnl2 (ENSCGRG00001016733) #23	Dnali1 (ENSCGRG00001012511) #24	Snip1 (ENSCGRG00001010414) #25	Meaf6 (ENSCGRG00001006760)	Zc3h12a (ENSCGRG00001015497) #26	Grik3 (ENSCGRG00001012192) #27	Csf3r (ENSCGRG00001021810) #29	Mrps15 (ENSCGRG00001019050) #30	Oscp1 (ENSCGRG00001012967) #31	ENSCGRG00001004317 #32	ENSCGRG00001000587 #33	Eva1b (ENSCGRG00001016486) #34	Sh3d21 (ENSCGRG00001013521) #35	Thrap3 (ENSCGRG00001003105) #36	Map7d1 (ENSCGRG00001022850) #37
Golden Hamster	MODERN SPECIES	783	Mycbp (ENSMAUG00000013797) #8	Rragc (ENSMAUG00000012656) #9	ENSMAUG00000005081	Pou3f1 (ENSMAUG00000014508)	Utp11 (ENSMAUG00000008360) #10	Fhl3 (ENSMAUG00000013735) #11	Sf3a3 (ENSMAUG00000013931) #12	Inpp5b (ENSMAUG00000020871) #13	Mtf1 (ENSMAUG00000010101) #14	1110065P20Rik (ENSMAUG00000011358)	ENSMAUG00000003715 #16	Maneal (ENSMAUG00000019065) #17	Epha10 (ENSMAUG00000019172) #19	Cdca8 (ENSMAUG00000001752) #20	9930104L06Rik (ENSMAUG00000001306) #21	Rspo1 (ENSMAUG00000017138) #22	Gnl2 (ENSMAUG00000018529) #23	Dnali1 (ENSMAUG00000008689) #24	Snip1 (ENSMAUG00000015995) #25	Meaf6 (ENSMAUG00000009391)	Zc3h12a (ENSMAUG00000012893) #26	Grik3 (ENSMAUG00000018300) #27	Csf3r (ENSMAUG00000001404) #29	Mrps15 (ENSMAUG00000021202) #30	Oscp1 (ENSMAUG00000004945) #31	Stk40 (ENSMAUG00000014659) #33	Eva1b (ENSMAUG00000010494) #34	Sh3d21 (ENSMAUG00000014506) #35	Thrap3 (ENSMAUG00000019723) #36	ENSMAUG00000016543 #37	Trappc3 (ENSMAUG00000019950)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1518	ENSNGAG00000016834	ENSNGAG00000015287 #9	Pou3f1 (ENSNGAG00000014834)	Utp11 (ENSNGAG00000013351) #10	Fhl3 (ENSNGAG00000000445) #11	Sf3a3 (ENSNGAG00000018032) #12	Inpp5b (ENSNGAG00000002123) #13	Mtf1 (ENSNGAG00000007045) #14	1110065P20Rik (ENSNGAG00000020462)	Yrdc (ENSNGAG00000019099) #16	Maneal (ENSNGAG00000016106) #17	ENSNGAG00000012338 #19	ENSNGAG00000012305 #19	Cdca8 (ENSNGAG00000000618) #20	9930104L06Rik (ENSNGAG00000016862) #21	Rspo1 (ENSNGAG00000018477) #22	Gnl2 (ENSNGAG00000005990) #23	Dnali1 (ENSNGAG00000012187) #24	Snip1 (ENSNGAG00000013435) #25	Meaf6 (ENSNGAG00000017133)	Zc3h12a (ENSNGAG00000018725) #26	Grik3 (ENSNGAG00000015131) #27
Lesser Egyptian jerboa	MODERN SPECIES	117	ENSJJAG00000000420	Ndufs5 (ENSJJAG00000005616)	Akirin1 (ENSJJAG00000008584)	Mycbp (ENSJJAG00000015657) #8	Rragc (ENSJJAG00000018398) #9	Utp11 (ENSJJAG00000024043) #10	Fhl3 (ENSJJAG00000002608) #11	Sf3a3 (ENSJJAG00000012404) #12	Inpp5b (ENSJJAG00000024109) #13	Mtf1 (ENSJJAG00000012657) #14	1110065P20Rik (ENSJJAG00000016651)	ENSJJAG00000023117 #16	Maneal (ENSJJAG00000009404) #17	Epha10 (ENSJJAG00000019817) #19	Cdca8 (ENSJJAG00000020145) #20	Rspo1 (ENSJJAG00000001617) #22	Gnl2 (ENSJJAG00000010798) #23	Dnali1 (ENSJJAG00000002274) #24	Snip1 (ENSJJAG00000023710) #25	ENSJJAG00000000604	ENSJJAG00000013630	Zc3h12a (ENSJJAG00000004252) #26	Grik3 (ENSJJAG00000017762) #27	Csf3r (ENSJJAG00000017669) #29	Mrps15 (ENSJJAG00000022198) #30	Oscp1 (ENSJJAG00000023834) #31	Stk40 (ENSJJAG00000013773) #33	Eva1b (ENSJJAG00000000205) #34	ENSJJAG00000013087 #35	ENSJJAG00000024064 #36	Map7d1 (ENSJJAG00000018805) #37
Kangaroo rat	MODERN SPECIES	352	Rhbdl2 (ENSDORG00000010234)	ENSDORG00000028436	Mycbp (ENSDORG00000010232) #8	ENSDORG00000024713	Rragc (ENSDORG00000010231) #9	Fhl3 (ENSDORG00000029094) #11	Utp11 (ENSDORG00000005348) #10	Sf3a3 (ENSDORG00000008798) #12	Inpp5b (ENSDORG00000008793) #13	ENSDORG00000008791	1110065P20Rik (ENSDORG00000024380)	Yrdc (ENSDORG00000008788) #16	Maneal (ENSDORG00000008785) #17	Epha10 (ENSDORG00000001556) #19	Cdca8 (ENSDORG00000001551) #20	Rspo1 (ENSDORG00000028461) #22	Gnl2 (ENSDORG00000014429) #23	Dnali1 (ENSDORG00000028615) #24	Snip1 (ENSDORG00000028338) #25	Meaf6 (ENSDORG00000012668)	Zc3h12a (ENSDORG00000012666) #26
Lagomorpha	ANCESTRAL SPECIES	36			ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752.a #19	ENSGT00940000160752.b #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000168963	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Pika	MODERN SPECIES	3215																RSPO1 (ENSOPRG00000008839) #22
Rabbit	MODERN SPECIES	437		ENSOCUG00000021085	UTP11 (ENSOCUG00000007154) #10	FHL3 (ENSOCUG00000012459) #11	SF3A3 (ENSOCUG00000005407) #12	INPP5B (ENSOCUG00000005395) #13	MTF1 (ENSOCUG00000005389) #14	C1orf122 (ENSOCUG00000008069)	YRDC (ENSOCUG00000005384) #16	MANEAL (ENSOCUG00000005375) #17	ENSOCUG00000037075 #19	ENSOCUG00000025671 #19	ENSOCUG00000030887 #19	CDCA8 (ENSOCUG00000017043) #20	ENSOCUG00000021550 #21	ENSOCUG00000010888 #22	GNL2 (ENSOCUG00000010877) #23	DNALI1 (ENSOCUG00000010871) #24	SNIP1 (ENSOCUG00000010867) #25	MEAF6 (ENSOCUG00000010862)	ZC3H12A (ENSOCUG00000010856) #26	GRIK3 (ENSOCUG00000005581) #27	CSF3R (ENSOCUG00000011231) #29	MRPS15 (ENSOCUG00000005675) #30	OSCP1 (ENSOCUG00000005337) #31	STK40 (ENSOCUG00000005325) #33	ENSOCUG00000002287 #34	ENSOCUG00000003260 #35	THRAP3 (ENSOCUG00000005323) #36	MAP7D1 (ENSOCUG00000001551) #37	TRAPPC3 (ENSOCUG00000011044)
Tree shrew	MODERN SPECIES	3157													ENSTBEG00000005531 #19	CDCA8 (ENSTBEG00000004883) #20	C1orf109 (ENSTBEG00000004732) #21	RSPO1 (ENSTBEG00000004539) #22	GNL2 (ENSTBEG00000003443) #23	DNALI1 (ENSTBEG00000002663) #24
Primates	ANCESTRAL SPECIES	4	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h #12	ENSGT00940000178211	ENSGT00530000063402.a.g #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Platyrrhini	ANCESTRAL SPECIES		ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.g #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b.b #16	ENSGT00570000079623	ENSGT00390000015364.b.a #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115.n.a #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364.i #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000165268	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.g #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b.a #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115.n.a #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364.i #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Cebidae_a	ANCESTRAL SPECIES		ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813.a #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.g #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b.b #16	ENSGT00570000079623	ENSGT00390000015364.b.a #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115.n.a #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553.r #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364.i #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Capuchin	MODERN SPECIES	420				POU3F1 (ENSCCAG00000020138)	ENSCCAG00000034131 #10	FHL3 (ENSCCAG00000029057) #11	ENSCCAG00000033732 #12	INPP5B (ENSCCAG00000001396) #13	MTF1 (ENSCCAG00000022917) #14	C1orf122 (ENSCCAG00000030218)	YRDC (ENSCCAG00000028891) #16	MANEAL (ENSCCAG00000021989) #17	EPHA10 (ENSCCAG00000030980) #19	CDCA8 (ENSCCAG00000036232) #20	C1orf109 (ENSCCAG00000037620) #21	RSPO1 (ENSCCAG00000035995) #22	GNL2 (ENSCCAG00000034952) #23	DNALI1 (ENSCCAG00000027503) #24	ENSCCAG00000015832 #25	MEAF6 (ENSCCAG00000021190)	ZC3H12A (ENSCCAG00000023848) #26	GRIK3 (ENSCCAG00000028380) #27	CSF3R (ENSCCAG00000027856) #29	OSCP1 (ENSCCAG00000025052) #31	ENSCCAG00000018913 #32
Bolivian squirrel monkey	MODERN SPECIES	130	AKIRIN1 (ENSSBOG00000032907)	RHBDL2 (ENSSBOG00000026311)	MYCBP (ENSSBOG00000030077) #8	RRAGC (ENSSBOG00000031005) #9	ENSSBOG00000028225 #10	FHL3 (ENSSBOG00000032864) #11	ENSSBOG00000032688 #12	INPP5B (ENSSBOG00000020992) #13	MTF1 (ENSSBOG00000032793) #14	YRDC (ENSSBOG00000018937) #16	ENSSBOG00000024383 #15	MANEAL (ENSSBOG00000018598) #17	EPHA10 (ENSSBOG00000025445) #19	CDCA8 (ENSSBOG00000023776) #20	C1orf109 (ENSSBOG00000025534) #21	RSPO1 (ENSSBOG00000029659) #22	GNL2 (ENSSBOG00000020194) #23	DNALI1 (ENSSBOG00000018682) #24	SNIP1 (ENSSBOG00000035829) #25
Mas night monkey	MODERN SPECIES	957				POU3F1 (ENSANAG00000021421)	UTP11 (ENSANAG00000022223) #10	FHL3 (ENSANAG00000026738) #11	ENSANAG00000014878 #12	INPP5B (ENSANAG00000020584) #13	MTF1 (ENSANAG00000021789) #14	ENSANAG00000028788 #16	C1orf122 (ENSANAG00000023136)	MANEAL (ENSANAG00000028325) #17	EPHA10 (ENSANAG00000035395) #19	ENSANAG00000031733 #20	C1orf109 (ENSANAG00000020846) #21	RSPO1 (ENSANAG00000027107) #22	GNL2 (ENSANAG00000023449) #23	DNALI1 (ENSANAG00000014001) #24	SNIP1 (ENSANAG00000019123) #25	ENSANAG00000028024	ZC3H12A (ENSANAG00000009908) #26	GRIK3 (ENSANAG00000037814) #27	ENSANAG00000029021	CSF3R (ENSANAG00000031691) #29	MRPS15 (ENSANAG00000024978) #30	OSCP1 (ENSANAG00000026578) #31	ENSANAG00000018759 #32	STK40 (ENSANAG00000026859) #33	EVA1B (ENSANAG00000029581) #34	SH3D21 (ENSANAG00000028854) #35	ENSANAG00000024479 #36
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000157135.j	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Hominidae	ANCESTRAL SPECIES	3	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000157135.j	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00950000182891.a.a.b.a.a.a.b.a.b.a	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000157135.j	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00950000182891.a.a.b.a.a.a.b.a.b.a	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Gorilla	MODERN SPECIES		MYCBP (ENSGGOG00000005810) #8	RRAGC (ENSGGOG00000013382) #9	ENSGGOG00000027537	UTP11 (ENSGGOG00000022705) #10	FHL3 (ENSGGOG00000002876) #11	SF3A3 (ENSGGOG00000013928) #12	INPP5B (ENSGGOG00000001150) #13	MTF1 (ENSGGOG00000007624) #14	ENSGGOG00000028421 #15	YRDC (ENSGGOG00000007619) #16	ENSGGOG00000007612 #17	ENSGGOG00000022800	EPHA10 (ENSGGOG00000007724) #19	CDCA8 (ENSGGOG00000007719) #20	C1orf109 (ENSGGOG00000007715) #21	RSPO1 (ENSGGOG00000007712) #22	GNL2 (ENSGGOG00000007704) #23	DNALI1 (ENSGGOG00000007698) #24	ENSGGOG00000042544	SNIP1 (ENSGGOG00000022697) #25	MEAF6 (ENSGGOG00000017191)	ZC3H12A (ENSGGOG00000009268) #26	GRIK3 (ENSGGOG00000011315) #27	CSF3R (ENSGGOG00000013573) #29	MRPS15 (ENSGGOG00000013565) #30	OSCP1 (ENSGGOG00000007041) #31	LSM10 (ENSGGOG00000003556) #32	STK40 (ENSGGOG00000011597) #33	EVA1B (ENSGGOG00000006937) #34	SH3D21 (ENSGGOG00000006931) #35	THRAP3 (ENSGGOG00000006917) #36
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000157135.j	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00950000182891.a.a.b.a.a.a.b.a.b.a	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Human	MODERN SPECIES		ENSG00000274944	MYCBP (ENSG00000214114) #8	RRAGC (ENSG00000116954) #9	POU3F1 (ENSG00000185668)	UTP11 (ENSG00000183520) #10	FHL3 (ENSG00000183386) #11	SF3A3 (ENSG00000183431) #12	INPP5B (ENSG00000204084) #13	MTF1 (ENSG00000188786) #14	C1orf122 (ENSG00000197982)	YRDC (ENSG00000196449) #16	MANEAL (ENSG00000185090) #17	EPHA10 (ENSG00000183317) #19	CDCA8 (ENSG00000134690) #20	C1orf109 (ENSG00000116922) #21	RSPO1 (ENSG00000169218) #22	GNL2 (ENSG00000134697) #23	DNALI1 (ENSG00000163879) #24	SNIP1 (ENSG00000163877) #25	MEAF6 (ENSG00000163875)	ZC3H12A (ENSG00000163874) #26	GRIK3 (ENSG00000163873) #27	CSF3R (ENSG00000119535) #29	MRPS15 (ENSG00000116898) #30	OSCP1 (ENSG00000116885) #31	LSM10 (ENSG00000181817) #32	STK40 (ENSG00000196182) #33	EVA1B (ENSG00000142694) #34	SH3D21 (ENSG00000214193) #35	THRAP3 (ENSG00000054118) #36	MAP7D1 (ENSG00000116871) #37
Pan	ANCESTRAL SPECIES		ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00940000165942 #15	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000157135.j	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00950000182891.a.a.b.a.a.a.b.a.b.a	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Chimpanzee	MODERN SPECIES		RRAGC (ENSPTRG00000000564) #9	ENSPTRG00000046426	POU3F1 (ENSPTRG00000030679)	UTP11 (ENSPTRG00000000561) #10	FHL3 (ENSPTRG00000000560) #11	SF3A3 (ENSPTRG00000000559) #12	INPP5B (ENSPTRG00000030681) #13	MTF1 (ENSPTRG00000022932) #14	ENSPTRG00000000558	YRDC (ENSPTRG00000000557) #16	MANEAL (ENSPTRG00000000556) #17	ENSPTRG00000042294	EPHA10 (ENSPTRG00000000553) #19	CDCA8 (ENSPTRG00000000552) #20	C1H1orf109 (ENSPTRG00000000551) #21	RSPO1 (ENSPTRG00000000550) #22	GNL2 (ENSPTRG00000000549) #23	DNALI1 (ENSPTRG00000000548) #24	ENSPTRG00000045895	SNIP1 (ENSPTRG00000000547) #25	MEAF6 (ENSPTRG00000047980)	ZC3H12A (ENSPTRG00000000544) #26	GRIK3 (ENSPTRG00000000543) #27	CSF3R (ENSPTRG00000000542) #29	MRPS15 (ENSPTRG00000000541) #30	OSCP1 (ENSPTRG00000000540) #31	LSM10 (ENSPTRG00000000539) #32	STK40 (ENSPTRG00000000538) #33	EVA1B (ENSPTRG00000000537) #34	SH3D21 (ENSPTRG00000034515) #35	THRAP3 (ENSPTRG00000000535) #36
Bonobo	MODERN SPECIES		ENSPPAG00000032287	RRAGC (ENSPPAG00000029918) #9	ENSPPAG00000027652	UTP11 (ENSPPAG00000030136) #10	FHL3 (ENSPPAG00000038081) #11	SF3A3 (ENSPPAG00000034066) #12	INPP5B (ENSPPAG00000007165) #13	MTF1 (ENSPPAG00000033358) #14	ENSPPAG00000029353 #15	ENSPPAG00000039722 #16	ENSPPAG00000033012 #17	ENSPPAG00000035218	EPHA10 (ENSPPAG00000042080) #19	CDCA8 (ENSPPAG00000030888) #20	C1orf109 (ENSPPAG00000043440) #21	RSPO1 (ENSPPAG00000042330) #22	GNL2 (ENSPPAG00000001559) #23	DNALI1 (ENSPPAG00000032274) #24	ENSPPAG00000001093	SNIP1 (ENSPPAG00000039865) #25	MEAF6 (ENSPPAG00000028352)	ZC3H12A (ENSPPAG00000041054) #26	GRIK3 (ENSPPAG00000029669) #27	CSF3R (ENSPPAG00000037401) #29	MRPS15 (ENSPPAG00000025884) #30	OSCP1 (ENSPPAG00000032111) #31	LSM10 (ENSPPAG00000023465) #32	STK40 (ENSPPAG00000038002) #33	EVA1B (ENSPPAG00000028458) #34	SH3D21 (ENSPPAG00000028393) #35	THRAP3 (ENSPPAG00000028961) #36
Orangutan	MODERN SPECIES		GJA9 (ENSPPYG00000001514) #7	MYCBP (ENSPPYG00000001515) #8	RRAGC (ENSPPYG00000001516) #9	POU3F1 (ENSPPYG00000039724)	UTP11 (ENSPPYG00000001517) #10	FHL3 (ENSPPYG00000001518) #11	SF3A3 (ENSPPYG00000001519) #12	INPP5B (ENSPPYG00000001520) #13	MTF1 (ENSPPYG00000001521) #14	C1orf122 (ENSPPYG00000001522)	YRDC (ENSPPYG00000034086) #16	MANEAL (ENSPPYG00000001524) #17	EPHA10 (ENSPPYG00000001525) #19	CDCA8 (ENSPPYG00000001526) #20	C1orf109 (ENSPPYG00000001527) #21	RSPO1 (ENSPPYG00000001528) #22	GNL2 (ENSPPYG00000001529) #23	DNALI1 (ENSPPYG00000001530) #24	ENSPPYG00000001531	SNIP1 (ENSPPYG00000001532) #25	MEAF6 (ENSPPYG00000034713)	ZC3H12A (ENSPPYG00000001534) #26	GRIK3 (ENSPPYG00000001535) #27	CSF3R (ENSPPYG00000001536) #29	MRPS15 (ENSPPYG00000001537) #30	OSCP1 (ENSPPYG00000001538) #31	LSM10 (ENSPPYG00000001539) #32	STK40 (ENSPPYG00000001540) #33	EVA1B (ENSPPYG00000030005) #34	SH3D21 (ENSPPYG00000001543) #35	THRAP3 (ENSPPYG00000001544) #36
Gibbon	MODERN SPECIES	2	ENSNLEG00000029170	RRAGC (ENSNLEG00000011794) #9	ENSNLEG00000030739	UTP11 (ENSNLEG00000033980) #10	FHL3 (ENSNLEG00000011730) #11	SF3A3 (ENSNLEG00000011720) #12	INPP5B (ENSNLEG00000011699) #13	MTF1 (ENSNLEG00000011682) #14	ENSNLEG00000011653 #15	YRDC (ENSNLEG00000011665) #16	MANEAL (ENSNLEG00000011655) #17	ENSNLEG00000031312	EPHA10 (ENSNLEG00000011640) #19	CDCA8 (ENSNLEG00000011630) #20	ENSNLEG00000031719 #21	RSPO1 (ENSNLEG00000011628) #22	GNL2 (ENSNLEG00000011599) #23	DNALI1 (ENSNLEG00000011584) #24	SNIP1 (ENSNLEG00000011577) #25	MEAF6 (ENSNLEG00000011546)	ZC3H12A (ENSNLEG00000011545) #26	GRIK3 (ENSNLEG00000011524) #27	CSF3R (ENSNLEG00000011482) #29	MRPS15 (ENSNLEG00000030022) #30	OSCP1 (ENSNLEG00000011442) #31	LSM10 (ENSNLEG00000033754) #32	STK40 (ENSNLEG00000011406) #33	EVA1B (ENSNLEG00000030121) #34	SH3D21 (ENSNLEG00000011391) #35	THRAP3 (ENSNLEG00000011359) #36	ENSNLEG00000011317 #37
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.d #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Vervet Monkey	MODERN SPECIES	12	GJA9 (ENSCSAG00000000136) #7	MYCBP (ENSCSAG00000001124) #8	RRAGC (ENSCSAG00000001123) #9	POU3F1 (ENSCSAG00000000135)	UTP11 (ENSCSAG00000001122) #10	FHL3 (ENSCSAG00000001121) #11	SF3A3 (ENSCSAG00000001120) #12	INPP5B (ENSCSAG00000001119) #13	MTF1 (ENSCSAG00000001118) #14	C1orf122 (ENSCSAG00000001117)	YRDC (ENSCSAG00000001116) #16	MANEAL (ENSCSAG00000001115) #17	EPHA10 (ENSCSAG00000001114) #19	CDCA8 (ENSCSAG00000001113) #20	C1orf109 (ENSCSAG00000001112) #21	RSPO1 (ENSCSAG00000001111) #22	GNL2 (ENSCSAG00000001110) #23	DNALI1 (ENSCSAG00000001109) #24	SNIP1 (ENSCSAG00000001108) #25	MEAF6 (ENSCSAG00000001107)	ZC3H12A (ENSCSAG00000001106) #26	GRIK3 (ENSCSAG00000001105) #27	CSF3R (ENSCSAG00000001104) #29	MRPS15 (ENSCSAG00000001103) #30	OSCP1 (ENSCSAG00000001102) #31	LSM10 (ENSCSAG00000000134) #32	STK40 (ENSCSAG00000001101) #33	EVA1B (ENSCSAG00000001099) #34	SH3D21 (ENSCSAG00000001100) #35	THRAP3 (ENSCSAG00000001098) #36	MAP7D1 (ENSCSAG00000001097) #37
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.d #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Macaca	ANCESTRAL SPECIES		ENSGT00390000017974.db #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.c #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Macaca_a	ANCESTRAL SPECIES		ENSGT00390000017974.db #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.d #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Crab-eating macaque	MODERN SPECIES		RRAGC (ENSMFAG00000032228) #9	UTP11 (ENSMFAG00000030442) #10	FHL3 (ENSMFAG00000000875) #11	SF3A3 (ENSMFAG00000043047) #12	ENSMFAG00000059069	INPP5B (ENSMFAG00000034447) #13	MTF1 (ENSMFAG00000002419) #14	ENSMFAG00000003611	YRDC (ENSMFAG00000003487) #16	MANEAL (ENSMFAG00000003403) #17	ENSMFAG00000041787 #19	ENSMFAG00000039103 #19	ENSMFAG00000050459 #19	CDCA8 (ENSMFAG00000001570) #20	C1orf109 (ENSMFAG00000063901) #21	RSPO1 (ENSMFAG00000043851) #22	GNL2 (ENSMFAG00000039033) #23	DNALI1 (ENSMFAG00000038046) #24	SNIP1 (ENSMFAG00000040288) #25	ZC3H12A (ENSMFAG00000032647) #26	ENSMFAG00000052566	GRIK3 (ENSMFAG00000002477) #27	CSF3R (ENSMFAG00000032558) #29	ENSMFAG00000038082 #30	OSCP1 (ENSMFAG00000043477) #31	LSM10 (ENSMFAG00000061237) #32	STK40 (ENSMFAG00000000703) #33	EVA1B (ENSMFAG00000053220) #34	SH3D21 (ENSMFAG00000036528) #35	THRAP3 (ENSMFAG00000040144) #36	TRAPPC3 (ENSMFAG00000038169)
Rhesus	MODERN SPECIES		MYCBP (ENSMMUG00000039765) #8	RRAGC (ENSMMUG00000023634) #9	POU3F1 (ENSMMUG00000044406)	UTP11 (ENSMMUG00000020834) #10	FHL3 (ENSMMUG00000023200) #11	SF3A3 (ENSMMUG00000023199) #12	ENSMMUG00000054776	INPP5B (ENSMMUG00000023277) #13	MTF1 (ENSMMUG00000023275) #14	C1H1orf122 (ENSMMUG00000005371)	YRDC (ENSMMUG00000005372) #16	MANEAL (ENSMMUG00000022040) #17	EPHA10 (ENSMMUG00000022038) #19	CDCA8 (ENSMMUG00000014340) #20	C1H1orf109 (ENSMMUG00000044826) #21	RSPO1 (ENSMMUG00000008420) #22	GNL2 (ENSMMUG00000008419) #23	DNALI1 (ENSMMUG00000008418) #24	SNIP1 (ENSMMUG00000059855) #25	MEAF6 (ENSMMUG00000010328)	ZC3H12A (ENSMMUG00000010323) #26	GRIK3 (ENSMMUG00000009679) #27	ENSMMUG00000053885	CSF3R (ENSMMUG00000020434) #29	MRPS15 (ENSMMUG00000020433) #30	OSCP1 (ENSMMUG00000020432) #31	LSM10 (ENSMMUG00000017338) #32	STK40 (ENSMMUG00000016212) #33	EVA1B (ENSMMUG00000057604) #34	SH3D21 (ENSMMUG00000011688) #35	THRAP3 (ENSMMUG00000014622) #36
Pig-tailed macaque	MODERN SPECIES	217	RRAGC (ENSMNEG00000036698) #9	ENSMNEG00000043355	ENSMNEG00000041499	POU3F1 (ENSMNEG00000009418)	UTP11 (ENSMNEG00000041655) #10	FHL3 (ENSMNEG00000010982) #11	SF3A3 (ENSMNEG00000044291) #12	INPP5B (ENSMNEG00000033845) #13	MTF1 (ENSMNEG00000038330) #14	C1orf122 (ENSMNEG00000011544)	YRDC (ENSMNEG00000029348) #16	MANEAL (ENSMNEG00000036440) #17	EPHA10 (ENSMNEG00000032931) #19	CDCA8 (ENSMNEG00000042921) #20	C1orf109 (ENSMNEG00000039182) #21	RSPO1 (ENSMNEG00000034664) #22	GNL2 (ENSMNEG00000043438) #23	DNALI1 (ENSMNEG00000035462) #24	SNIP1 (ENSMNEG00000004331) #25	MEAF6 (ENSMNEG00000034129)	ZC3H12A (ENSMNEG00000040453) #26	GRIK3 (ENSMNEG00000035057) #27	CSF3R (ENSMNEG00000033813) #29	MRPS15 (ENSMNEG00000042543) #30	OSCP1 (ENSMNEG00000043487) #31	LSM10 (ENSMNEG00000020023) #32	STK40 (ENSMNEG00000038686) #33	EVA1B (ENSMNEG00000041849) #34	SH3D21 (ENSMNEG00000043158) #35	THRAP3 (ENSMNEG00000018987) #36	MAP7D1 (ENSMNEG00000035413) #37
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00910000147413	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.d #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Olive baboon	MODERN SPECIES		RRAGC (ENSPANG00000017086) #9	POU3F1 (ENSPANG00000009765)	UTP11 (ENSPANG00000018634) #10	FHL3 (ENSPANG00000010240) #11	SF3A3 (ENSPANG00000021859) #12	ENSPANG00000051298	INPP5B (ENSPANG00000000705) #13	MTF1 (ENSPANG00000016211) #14	ENSPANG00000007644	YRDC (ENSPANG00000006487) #16	MANEAL (ENSPANG00000017578) #17	EPHA10 (ENSPANG00000023477) #19	CDCA8 (ENSPANG00000025284) #20	C1orf109 (ENSPANG00000046454) #21	ENSPANG00000040283	RSPO1 (ENSPANG00000016776) #22	GNL2 (ENSPANG00000025285) #23	DNALI1 (ENSPANG00000025521) #24	SNIP1 (ENSPANG00000016943) #25	MEAF6 (ENSPANG00000023016)	ZC3H12A (ENSPANG00000011821) #26	GRIK3 (ENSPANG00000005822) #27	ENSPANG00000002642	CSF3R (ENSPANG00000004799) #29	ENSPANG00000009486 #30	OSCP1 (ENSPANG00000009801) #31	LSM10 (ENSPANG00000023172) #32	STK40 (ENSPANG00000026394) #33	EVA1B (ENSPANG00000023876) #34	SH3D21 (ENSPANG00000019295) #35	THRAP3 (ENSPANG00000010532) #36
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00910000147664	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.t	ENSGT00950000185476	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.d #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Drill	MODERN SPECIES	1632				UTP11 (ENSMLEG00000030408) #10	FHL3 (ENSMLEG00000043336) #11	SF3A3 (ENSMLEG00000030641) #12	INPP5B (ENSMLEG00000034265) #13	MTF1 (ENSMLEG00000040453) #14	ENSMLEG00000041205 #15	YRDC (ENSMLEG00000041122) #16	MANEAL (ENSMLEG00000042910) #17	ENSMLEG00000039152	EPHA10 (ENSMLEG00000036102) #19	CDCA8 (ENSMLEG00000033455) #20	C1orf109 (ENSMLEG00000032853) #21	RSPO1 (ENSMLEG00000000137) #22	GNL2 (ENSMLEG00000044421) #23	DNALI1 (ENSMLEG00000029379) #24	SNIP1 (ENSMLEG00000040304) #25	ENSMLEG00000033390
Sooty mangabey	MODERN SPECIES	227	RRAGC (ENSCATG00000036245) #9	ENSCATG00000043118	POU3F1 (ENSCATG00000006621)	UTP11 (ENSCATG00000042680) #10	FHL3 (ENSCATG00000035550) #11	SF3A3 (ENSCATG00000043496) #12	INPP5B (ENSCATG00000037843) #13	MTF1 (ENSCATG00000037876) #14	C1orf122 (ENSCATG00000035798)	YRDC (ENSCATG00000036928) #16	MANEAL (ENSCATG00000035882) #17	EPHA10 (ENSCATG00000032555) #19	ENSCATG00000038225	CDCA8 (ENSCATG00000038767) #20	C1orf109 (ENSCATG00000036421) #21	RSPO1 (ENSCATG00000037142) #22	GNL2 (ENSCATG00000026503) #23	DNALI1 (ENSCATG00000037101) #24	SNIP1 (ENSCATG00000039335) #25	ENSCATG00000037164	ENSCATG00000006010	ZC3H12A (ENSCATG00000037700) #26	GRIK3 (ENSCATG00000038812) #27	CSF3R (ENSCATG00000038990) #29	ENSCATG00000044771 #30	OSCP1 (ENSCATG00000038966) #31	LSM10 (ENSCATG00000006589) #32	STK40 (ENSCATG00000039453) #33	EVA1B (ENSCATG00000039327) #34	SH3D21 (ENSCATG00000044150) #35	THRAP3 (ENSCATG00000038343) #36
Rhinopithecus	ANCESTRAL SPECIES	179	ENSGT00950000183031.A.a.a #9	ENSGT00940000154787.z	ENSGT00940000153096.b.d.fb.b.a.b	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.h.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT01050000247123	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257.s.b	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27
Golden snub-nosed monkey	MODERN SPECIES	2761	ENSRROG00000042967	RRAGC (ENSRROG00000004713) #9	ENSRROG00000043761	ENSRROG00000037856	UTP11 (ENSRROG00000011983) #10	FHL3 (ENSRROG00000045533) #11	SF3A3 (ENSRROG00000033888) #12	INPP5B (ENSRROG00000035588) #13	MTF1 (ENSRROG00000031591) #14	ENSRROG00000038617	YRDC (ENSRROG00000039370) #16	MANEAL (ENSRROG00000033600) #17	EPHA10 (ENSRROG00000003477) #19	CDCA8 (ENSRROG00000029031) #20	C1orf109 (ENSRROG00000043592) #21	RSPO1 (ENSRROG00000041896) #22	GNL2 (ENSRROG00000014347) #23	DNALI1 (ENSRROG00000030462) #24	SNIP1 (ENSRROG00000039875) #25	ENSRROG00000033616	ZC3H12A (ENSRROG00000037444) #26	ENSRROG00000001154	GRIK3 (ENSRROG00000033444) #27
Black snub-nosed monkey	MODERN SPECIES	1076				UTP11 (ENSRBIG00000027972) #10	FHL3 (ENSRBIG00000041423) #11	SF3A3 (ENSRBIG00000043567) #12	INPP5B (ENSRBIG00000035731) #13	MTF1 (ENSRBIG00000034186) #14	C1orf122 (ENSRBIG00000029168)	YRDC (ENSRBIG00000032289) #16	MANEAL (ENSRBIG00000027436) #17	ENSRBIG00000029418	EPHA10 (ENSRBIG00000032865) #19	CDCA8 (ENSRBIG00000027611) #20	C1orf109 (ENSRBIG00000032967) #21	RSPO1 (ENSRBIG00000037171) #22	GNL2 (ENSRBIG00000038390) #23	DNALI1 (ENSRBIG00000037303) #24	SNIP1 (ENSRBIG00000042106) #25	ENSRBIG00000043100	ZC3H12A (ENSRBIG00000042237) #26	GRIK3 (ENSRBIG00000036758) #27
Tarsier	MODERN SPECIES	5073				ENSTSYG00000036438	UTP11 (ENSTSYG00000005370) #10	FHL3 (ENSTSYG00000026733) #11	SF3A3 (ENSTSYG00000008417) #12	INPP5B (ENSTSYG00000005607) #13	MTF1 (ENSTSYG00000005589) #14	C1orf122 (ENSTSYG00000030491)	YRDC (ENSTSYG00000005555) #16	MANEAL (ENSTSYG00000005519) #17	EPHA10 (ENSTSYG00000000329) #19	CDCA8 (ENSTSYG00000003790) #20	CUNH1orf109 (ENSTSYG00000003771) #21	RSPO1 (ENSTSYG00000033249) #22	GNL2 (ENSTSYG00000004537) #23	DNALI1 (ENSTSYG00000004529) #24	SNIP1 (ENSTSYG00000004514) #25
Strepsirrhini	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Lemuriformes	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.j #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Mouse lemur	MODERN SPECIES	11	RHBDL2 (ENSMICG00000006246)	ENSMICG00000031944	RRAGC (ENSMICG00000006241) #9	POU3F1 (ENSMICG00000001500)	UTP11 (ENSMICG00000001496) #10	FHL3 (ENSMICG00000033109) #11	ENSMICG00000001485 #12	INPP5B (ENSMICG00000011984) #13	MTF1 (ENSMICG00000011969) #14	C1orf122 (ENSMICG00000034712)	YRDC (ENSMICG00000031688) #16	MANEAL (ENSMICG00000011948) #17	EPHA10 (ENSMICG00000011936) #19	ENSMICG00000045747 #20	C1orf109 (ENSMICG00000030638) #21	RSPO1 (ENSMICG00000011909) #22	ENSMICG00000011884	DNALI1 (ENSMICG00000011878) #24	SNIP1 (ENSMICG00000044466) #25	MEAF6 (ENSMICG00000030115)	ZC3H12A (ENSMICG00000004790) #26	GRIK3 (ENSMICG00000016437) #27	CSF3R (ENSMICG00000007970) #29	MRPS15 (ENSMICG00000047526) #30	OSCP1 (ENSMICG00000007944) #31	STK40 (ENSMICG00000007931) #33	EVA1B (ENSMICG00000044326) #34	SH3D21 (ENSMICG00000027388) #35	THRAP3 (ENSMICG00000007920) #36	MAP7D1 (ENSMICG00000016257) #37	TRAPPC3 (ENSMICG00000016250)
Lemuriformes_a	ANCESTRAL SPECIES	72	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.j #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26
Coquerels sifaka	MODERN SPECIES	357	RHBDL2 (ENSPCOG00000018792)	MYCBP (ENSPCOG00000016054) #8	ENSPCOG00000007138 #9	POU3F1 (ENSPCOG00000005829)	UTP11 (ENSPCOG00000019349) #10	FHL3 (ENSPCOG00000002438) #11	ENSPCOG00000020389 #12	INPP5B (ENSPCOG00000026418) #13	MTF1 (ENSPCOG00000018756) #14	C1orf122 (ENSPCOG00000015738)	YRDC (ENSPCOG00000013214) #16	MANEAL (ENSPCOG00000013247) #17	EPHA10 (ENSPCOG00000020610) #19	CDCA8 (ENSPCOG00000028744) #20	C1orf109 (ENSPCOG00000018968) #21	RSPO1 (ENSPCOG00000014534) #22	GNL2 (ENSPCOG00000016681) #23	DNALI1 (ENSPCOG00000014282) #24	SNIP1 (ENSPCOG00000028766) #25	MEAF6 (ENSPCOG00000025549)	ZC3H12A (ENSPCOG00000015837) #26
Greater bamboo lemur	MODERN SPECIES	848	GJA9 (ENSPSMG00000013798) #7	MYCBP (ENSPSMG00000013813) #8	ENSPSMG00000013828 #9	POU3F1 (ENSPSMG00000013843)	UTP11 (ENSPSMG00000013853) #10	FHL3 (ENSPSMG00000013887) #11	SF3A3 (ENSPSMG00000013953) #12	INPP5B (ENSPSMG00000014123) #13	MTF1 (ENSPSMG00000014236) #14	C1orf122 (ENSPSMG00000014244)	YRDC (ENSPSMG00000014256) #16	MANEAL (ENSPSMG00000014267) #17	EPHA10 (ENSPSMG00000014297) #19	CDCA8 (ENSPSMG00000014322) #20	C1orf109 (ENSPSMG00000014356) #21	RSPO1 (ENSPSMG00000014378) #22	GNL2 (ENSPSMG00000014401) #23	DNALI1 (ENSPSMG00000014433) #24	SNIP1 (ENSPSMG00000014438) #25	MEAF6 (ENSPSMG00000014500)	ZC3H12A (ENSPSMG00000014523) #26	ENSPSMG00000014531	FLVCR2 (ENSPSMG00000014586)	ERG28 (ENSPSMG00000014608)	BATF (ENSPSMG00000014617)	JDP2 (ENSPSMG00000014639)	FOS (ENSPSMG00000014692)	TMED10 (ENSPSMG00000014729)	NEK9 (ENSPSMG00000014787)	ZC2HC1C (ENSPSMG00000014834)	ENSPSMG00000014839
Bushbaby	MODERN SPECIES	140	RAB5IF (ENSOGAG00000000891)	SLA2 (ENSOGAG00000000893)	NDRG3 (ENSOGAG00000000895)	DSN1 (ENSOGAG00000000896)	SOGA1 (ENSOGAG00000000898)	TLDC2 (ENSOGAG00000000905)	SAMHD1 (ENSOGAG00000000908)	SF3A3 (ENSOGAG00000012107) #12	INPP5B (ENSOGAG00000012103) #13	MTF1 (ENSOGAG00000000872) #14	YRDC (ENSOGAG00000030474) #16	MANEAL (ENSOGAG00000000871) #17	EPHA10 (ENSOGAG00000008660) #19	CDCA8 (ENSOGAG00000008655) #20	C1orf109 (ENSOGAG00000008650) #21	RSPO1 (ENSOGAG00000008648) #22	GNL2 (ENSOGAG00000008643) #23	DNALI1 (ENSOGAG00000008639) #24	SNIP1 (ENSOGAG00000008634) #25	MEAF6 (ENSOGAG00000006773)	ZC3H12A (ENSOGAG00000030940) #26	GRIK3 (ENSOGAG00000002138) #27	CSF3R (ENSOGAG00000002660) #29	ENSOGAG00000002656 #30	OSCP1 (ENSOGAG00000002654) #31	LSM10 (ENSOGAG00000002653) #32	STK40 (ENSOGAG00000002651) #33	EVA1B (ENSOGAG00000025550) #34	ENSOGAG00000028592 #35	THRAP3 (ENSOGAG00000002648) #36	MAP7D1 (ENSOGAG00000013476) #37
Laurasiatheria	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00990000210150	ENSGT00940000168963	ENSGT00940000160627 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158871 #22
Hedgehog	MODERN SPECIES	6429																RSPO1 (ENSEEUG00000007087) #22
Common shrew	MODERN SPECIES	5005																RSPO1 (ENSSARG00000002038) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Artiodactyla	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Suina	ANCESTRAL SPECIES	10	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Pig	MODERN SPECIES	14	GJA9 (ENSSSCG00000003650) #7	MYCBP (ENSSSCG00000051819) #8	RRAGC (ENSSSCG00000003648) #9	POU3F1 (ENSSSCG00000003646)	UTP11 (ENSSSCG00000003645) #10	FHL3 (ENSSSCG00000003644) #11	SF3A3 (ENSSSCG00000003643) #12	INPP5B (ENSSSCG00000003642) #13	MTF1 (ENSSSCG00000037516) #14	C1orf122 (ENSSSCG00000038888)	YRDC (ENSSSCG00000040425) #16	MANEAL (ENSSSCG00000032960) #17	EPHA10 (ENSSSCG00000038675) #19	CDCA8 (ENSSSCG00000032909) #20	C1orf109 (ENSSSCG00000039905) #21	RSPO1 (ENSSSCG00000032240) #22	GNL2 (ENSSSCG00000031631) #23	DNALI1 (ENSSSCG00000058884) #24	SNIP1 (ENSSSCG00000029991) #25	MEAF6 (ENSSSCG00000034611)	ZC3H12A (ENSSSCG00000037815) #26	GRIK3 (ENSSSCG00000003640) #27	CSF3R (ENSSSCG00000025795) #29	MRPS15 (ENSSSCG00000034647) #30	OSCP1 (ENSSSCG00000036709) #31	LSM10 (ENSSSCG00000038916) #32	STK40 (ENSSSCG00000036832) #33	EVA1B (ENSSSCG00000033892) #34	ENSSSCG00000028892 #35	THRAP3 (ENSSSCG00000029954) #36	MAP7D1 (ENSSSCG00000003637) #37
Chacoan peccary	MODERN SPECIES	39	GJA9 (ENSCWAG00000005925) #7	ENSCWAG00000005936	RRAGC (ENSCWAG00000005946) #9	POU3F1 (ENSCWAG00000005974)	UTP11 (ENSCWAG00000005988) #10	FHL3 (ENSCWAG00000006016) #11	SF3A3 (ENSCWAG00000006038) #12	INPP5B (ENSCWAG00000006100) #13	MTF1 (ENSCWAG00000006427) #14	C1orf122 (ENSCWAG00000006478)	YRDC (ENSCWAG00000006530) #16	MANEAL (ENSCWAG00000006552) #17	EPHA10 (ENSCWAG00000006616) #19	CDCA8 (ENSCWAG00000006833) #20	C1orf109 (ENSCWAG00000006887) #21	RSPO1 (ENSCWAG00000006919) #22	GNL2 (ENSCWAG00000007009) #23	DNALI1 (ENSCWAG00000007051) #24	SNIP1 (ENSCWAG00000007114) #25	MEAF6 (ENSCWAG00000007151)	ENSCWAG00000007239 #26	GRIK3 (ENSCWAG00000007280) #27	CSF3R (ENSCWAG00000007434) #29	MRPS15 (ENSCWAG00000007709) #30	OSCP1 (ENSCWAG00000007749) #31	LSM10 (ENSCWAG00000007870) #32	STK40 (ENSCWAG00000007890) #33	EVA1B (ENSCWAG00000007937) #34	ENSCWAG00000008017	THRAP3 (ENSCWAG00000008133) #36	MAP7D1 (ENSCWAG00000008245) #37
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Camelidae	ANCESTRAL SPECIES	3	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00940000165942 #15	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Alpaca	MODERN SPECIES	511																ENSVPAG00000001581 #22	GNL2 (ENSVPAG00000001579) #23
Arabian camel	MODERN SPECIES	4	ENSCDRG00005010694	RRAGC (ENSCDRG00005010657) #9	POU3F1 (ENSCDRG00005010634)	UTP11 (ENSCDRG00005010504) #10	FHL3 (ENSCDRG00005010455) #11	SF3A3 (ENSCDRG00005010361) #12	INPP5B (ENSCDRG00005010217) #13	MTF1 (ENSCDRG00005010175) #14	ENSCDRG00005010132 #15	YRDC (ENSCDRG00005010060) #16	MANEAL (ENSCDRG00005010032) #17	ENSCDRG00005009993 #19	ENSCDRG00005009929 #19	CDCA8 (ENSCDRG00005009838) #20	C1orf109 (ENSCDRG00005009761) #21	RSPO1 (ENSCDRG00005009641) #22	GNL2 (ENSCDRG00005009550) #23	DNALI1 (ENSCDRG00005009434) #24	SNIP1 (ENSCDRG00005009364) #25	MEAF6 (ENSCDRG00005009070)	ZC3H12A (ENSCDRG00005008948) #26	GRIK3 (ENSCDRG00005008818) #27	CSF3R (ENSCDRG00005008687) #29	MRPS15 (ENSCDRG00005008579) #30	OSCP1 (ENSCDRG00005008387) #31	LSM10 (ENSCDRG00005008343) #32	STK40 (ENSCDRG00005008254) #33	EVA1B (ENSCDRG00005008175) #34	ENSCDRG00005008118 #35	THRAP3 (ENSCDRG00005008001) #36	MAP7D1 (ENSCDRG00005007249) #37
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Cetacea	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.g #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00990000210150	ENSGT00950000183163.a.a #36
Odontoceti	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.g #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00990000210150	ENSGT00950000183163.a.a #36
Odontoceti_a	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.g #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00990000210150	ENSGT00950000183163.a.a #36
Odontoceti_b	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000154717.ib	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.g #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00990000210150	ENSGT00950000183163.a.a #36
Monodontidae	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000154717.ib	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.g #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00990000210150	ENSGT00950000183163.a.a #36
Narwhal	MODERN SPECIES	304	GJA9 (ENSMMNG00015008510) #7	MYCBP (ENSMMNG00015008524) #8	RRAGC (ENSMMNG00015008543) #9	POU3F1 (ENSMMNG00015008564)	UTP11 (ENSMMNG00015008575) #10	FHL3 (ENSMMNG00015008590) #11	SF3A3 (ENSMMNG00015008604) #12	INPP5B (ENSMMNG00015008630) #13	MTF1 (ENSMMNG00015008666) #14	C1orf122 (ENSMMNG00015008680)	YRDC (ENSMMNG00015008693) #16	MANEAL (ENSMMNG00015008706) #17	EPHA10 (ENSMMNG00015008734) #19	CDCA8 (ENSMMNG00015008750) #20	C1orf109 (ENSMMNG00015008763) #21	RSPO1 (ENSMMNG00015008781) #22	GNL2 (ENSMMNG00015008807) #23	DNALI1 (ENSMMNG00015008824) #24	SNIP1 (ENSMMNG00015008842) #25	MEAF6 (ENSMMNG00015008912)	ZC3H12A (ENSMMNG00015008939) #26	GRIK3 (ENSMMNG00015008981) #27	CSF3R (ENSMMNG00015008991) #29	MRPS15 (ENSMMNG00015009004) #30	OSCP1 (ENSMMNG00015009023) #31	LSM10 (ENSMMNG00015009078) #32	STK40 (ENSMMNG00015009085) #33	EVA1B (ENSMMNG00015009093) #34	ENSMMNG00015009102	THRAP3 (ENSMMNG00015009123) #36	MAP7D1 (ENSMMNG00015009143) #37
Beluga whale	MODERN SPECIES	74	GJA9 (ENSDLEG00000008667) #7	MYCBP (ENSDLEG00000008587) #8	RRAGC (ENSDLEG00000008544) #9	POU3F1 (ENSDLEG00000008526)	UTP11 (ENSDLEG00000008478) #10	FHL3 (ENSDLEG00000008434) #11	SF3A3 (ENSDLEG00000008314) #12	INPP5B (ENSDLEG00000008190) #13	MTF1 (ENSDLEG00000008133) #14	C1orf122 (ENSDLEG00000008113)	YRDC (ENSDLEG00000008095) #16	MANEAL (ENSDLEG00000008081) #17	EPHA10 (ENSDLEG00000008023) #19	CDCA8 (ENSDLEG00000007992) #20	CUNH1orf109 (ENSDLEG00000007987) #21	RSPO1 (ENSDLEG00000007971) #22	GNL2 (ENSDLEG00000007944) #23	DNALI1 (ENSDLEG00000020862) #24	SNIP1 (ENSDLEG00000020851) #25	MEAF6 (ENSDLEG00000020839)	ZC3H12A (ENSDLEG00000020831) #26	ENSDLEG00000020819	GRIK3 (ENSDLEG00000020811) #27	CSF3R (ENSDLEG00000020804) #29	ENSDLEG00000020797 #30	OSCP1 (ENSDLEG00000020789) #31	LSM10 (ENSDLEG00000020785) #32	STK40 (ENSDLEG00000020778) #33	EVA1B (ENSDLEG00000020774) #34	ENSDLEG00000020772	THRAP3 (ENSDLEG00000020766) #36
Vaquita	MODERN SPECIES		GJA9 (ENSPSNG00000019493) #7	MYCBP (ENSPSNG00000019460) #8	RRAGC (ENSPSNG00000019390) #9	POU3F1 (ENSPSNG00000019368)	UTP11 (ENSPSNG00000019337) #10	FHL3 (ENSPSNG00000019304) #11	SF3A3 (ENSPSNG00000019166) #12	INPP5B (ENSPSNG00000019093) #13	MTF1 (ENSPSNG00000019060) #14	C1orf122 (ENSPSNG00000019003)	YRDC (ENSPSNG00000018958) #16	MANEAL (ENSPSNG00000018886) #17	EPHA10 (ENSPSNG00000018680) #19	CDCA8 (ENSPSNG00000018607) #20	C1orf109 (ENSPSNG00000018547) #21	RSPO1 (ENSPSNG00000018411) #22	GNL2 (ENSPSNG00000018313) #23	DNALI1 (ENSPSNG00000018223) #24	SNIP1 (ENSPSNG00000018177) #25	MEAF6 (ENSPSNG00000018028)	ZC3H12A (ENSPSNG00000017941) #26	ENSPSNG00000017843	GRIK3 (ENSPSNG00000017499) #27	CSF3R (ENSPSNG00000017067) #29	ENSPSNG00000017018 #30	OSCP1 (ENSPSNG00000016833) #31	LSM10 (ENSPSNG00000016792) #32	STK40 (ENSPSNG00000016665) #33	EVA1B (ENSPSNG00000016616) #34	ENSPSNG00000016520	THRAP3 (ENSPSNG00000016451) #36
Dolphin	MODERN SPECIES	1480													EPHA10 (ENSTTRG00000008612) #19	CDCA8 (ENSTTRG00000008605) #20	C1orf109 (ENSTTRG00000008604) #21	RSPO1 (ENSTTRG00000008602) #22	GNL2 (ENSTTRG00000008600) #23	DNALI1 (ENSTTRG00000008599) #24	SNIP1 (ENSTTRG00000008598) #25	MEAF6 (ENSTTRG00000008594)	ZC3H12A (ENSTTRG00000008591) #26
Sperm whale	MODERN SPECIES	523																RSPO1 (ENSPCTG00005019274) #22
Blue whale	MODERN SPECIES		RHBDL2 (ENSBMSG00010002343)	GJA9 (ENSBMSG00010002329) #7	ENSBMSG00010002304 #9	POU3F1 (ENSBMSG00010002283)	UTP11 (ENSBMSG00010002271) #10	FHL3 (ENSBMSG00010002260) #11	SF3A3 (ENSBMSG00010002210) #12	INPP5B (ENSBMSG00010002152) #13	ENSBMSG00010002057 #14	C1orf122 (ENSBMSG00010002043)	YRDC (ENSBMSG00010002022) #16	MANEAL (ENSBMSG00010002000) #17	EPHA10 (ENSBMSG00010001956) #19	CDCA8 (ENSBMSG00010001930) #20	C1orf109 (ENSBMSG00010001923) #21	RSPO1 (ENSBMSG00010001901) #22	GNL2 (ENSBMSG00010001802) #23	DNALI1 (ENSBMSG00010001767) #24	SNIP1 (ENSBMSG00010001754) #25	ENSBMSG00010001718	ZC3H12A (ENSBMSG00010001681) #26	GRIK3 (ENSBMSG00010001634) #27	CSF3R (ENSBMSG00010001575) #29	MRPS15 (ENSBMSG00010001557) #30	OSCP1 (ENSBMSG00010001473) #31	ENSBMSG00010001447 #32	STK40 (ENSBMSG00010001425) #33	EVA1B (ENSBMSG00010001412) #34	THRAP3 (ENSBMSG00010001398) #36	MAP7D1 (ENSBMSG00010001348) #37	TRAPPC3 (ENSBMSG00010001294)
Pecora	ANCESTRAL SPECIES	2	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Percora_a	ANCESTRAL SPECIES	1	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Bovidae	ANCESTRAL SPECIES	1	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Caprinae	ANCESTRAL SPECIES	2	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737.j #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Rambouillet Sheep	MODERN SPECIES		AKIRIN1 (ENSOARG00020017964)	ENSOARG00020017826	RRAGC (ENSOARG00020017615) #9	POU3F1 (ENSOARG00020017594)	UTP11 (ENSOARG00020017421) #10	ENSOARG00020017363 #10	FHL3 (ENSOARG00020017300) #11	SF3A3 (ENSOARG00020017211) #12	MTF1 (ENSOARG00020016936) #14	C1orf122 (ENSOARG00020016851)	YRDC (ENSOARG00020016821) #16	MANEAL (ENSOARG00020016753) #17	EPHA10 (ENSOARG00020016310) #19	CDCA8 (ENSOARG00020016248) #20	C1orf109 (ENSOARG00020016199) #21	RSPO1 (ENSOARG00020016022) #22	GNL2 (ENSOARG00020015915) #23	DNALI1 (ENSOARG00020015777) #24	SNIP1 (ENSOARG00020015736) #25	MEAF6 (ENSOARG00020015561)	ZC3H12A (ENSOARG00020015441) #26	GRIK3 (ENSOARG00020015177) #27	CSF3R (ENSOARG00020015107) #29	MRPS15 (ENSOARG00020014966) #30	OSCP1 (ENSOARG00020014556) #31	LSM10 (ENSOARG00020014526) #32	STK40 (ENSOARG00020014470) #33	EVA1B (ENSOARG00020014434) #34	ENSOARG00020013812 #35	THRAP3 (ENSOARG00020013606) #36	MAP7D1 (ENSOARG00020013418) #37
Goat	MODERN SPECIES	22	GJA9 (ENSCHIG00000009538) #7	MYCBP (ENSCHIG00000017972) #8	RRAGC (ENSCHIG00000014399) #9	POU3F1 (ENSCHIG00000007604)	UTP11 (ENSCHIG00000008534) #10	FHL3 (ENSCHIG00000017642) #11	SF3A3 (ENSCHIG00000020638) #12	INPP5B (ENSCHIG00000011431) #13	MTF1 (ENSCHIG00000018538) #14	C1orf122 (ENSCHIG00000014209)	YRDC (ENSCHIG00000007882) #16	MANEAL (ENSCHIG00000017740) #17	EPHA10 (ENSCHIG00000023359) #19	CDCA8 (ENSCHIG00000026742) #20	C1orf109 (ENSCHIG00000011969) #21	RSPO1 (ENSCHIG00000023675) #22	GNL2 (ENSCHIG00000015731) #23	DNALI1 (ENSCHIG00000007466) #24	SNIP1 (ENSCHIG00000013452) #25	MEAF6 (ENSCHIG00000002979)	ZC3H12A (ENSCHIG00000021957) #26	GRIK3 (ENSCHIG00000021730) #27	CSF3R (ENSCHIG00000006768) #29	ENSCHIG00000016923 #30	OSCP1 (ENSCHIG00000012198) #31	LSM10 (ENSCHIG00000009398) #32	STK40 (ENSCHIG00000020883) #33	EVA1B (ENSCHIG00000011422) #34	ENSCHIG00000018156 #35	THRAP3 (ENSCHIG00000022784) #36	MAP7D1 (ENSCHIG00000003118) #37
Bovinae	ANCESTRAL SPECIES	1	ENSGT00950000183031.A.a.a.xd #9	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a.yd.b #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Bos	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a.yd.b #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Bos_a	ANCESTRAL SPECIES	1	ENSGT00390000017974 #8	ENSGT00940000165268	ENSGT00950000183031.A.a.a.yd.b #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Wild yak	MODERN SPECIES	547	ST8SIA1 (ENSBMUG00000004913)	ENSBMUG00000004917	RRAGC (ENSBMUG00000004925) #9	UTP11 (ENSBMUG00000004947) #10	FHL3 (ENSBMUG00000004966) #11	SF3A3 (ENSBMUG00000004990) #12	INPP5B (ENSBMUG00000005113) #13	MTF1 (ENSBMUG00000005144) #14	ENSBMUG00000005151 #15	YRDC (ENSBMUG00000005165) #16	ENSBMUG00000005169 #17	ENSBMUG00000005188 #19	ENSBMUG00000005202 #19	CDCA8 (ENSBMUG00000005233) #20	C1orf109 (ENSBMUG00000005238) #21	RSPO1 (ENSBMUG00000005266) #22	GNL2 (ENSBMUG00000005289) #23	DNALI1 (ENSBMUG00000005307) #24	SNIP1 (ENSBMUG00000005339) #25	ZC3H12A (ENSBMUG00000005352) #26	GRIK3 (ENSBMUG00000005367) #27	CSF3R (ENSBMUG00000005387) #29	MRPS15 (ENSBMUG00000005418) #30	OSCP1 (ENSBMUG00000005431) #31
Domestic yak	MODERN SPECIES	22	GJA9 (ENSBGRG00000005254) #7	ENSBGRG00000005258	ENSBGRG00000005276 #9	POU3F1 (ENSBGRG00000005324)	UTP11 (ENSBGRG00000005350) #10	FHL3 (ENSBGRG00000005470) #11	SF3A3 (ENSBGRG00000005515) #12	INPP5B (ENSBGRG00000005635) #13	MTF1 (ENSBGRG00000005837) #14	C1orf122 (ENSBGRG00000005887)	YRDC (ENSBGRG00000005914) #16	ENSBGRG00000005948 #17	EPHA10 (ENSBGRG00000006008) #19	CDCA8 (ENSBGRG00000006243) #20	C1orf109 (ENSBGRG00000006278) #21	RSPO1 (ENSBGRG00000006342) #22	GNL2 (ENSBGRG00000006437) #23	DNALI1 (ENSBGRG00000006531) #24	SNIP1 (ENSBGRG00000006583) #25	ZC3H12A (ENSBGRG00000006725) #26	GRIK3 (ENSBGRG00000006888) #27	ENSBGRG00000007155	CSF3R (ENSBGRG00000007254) #29	OSCP1 (ENSBGRG00000007695) #31	LSM10 (ENSBGRG00000007878) #32	STK40 (ENSBGRG00000007897) #33	ENSBGRG00000008041 #34	SH3D21 (ENSBGRG00000008077) #35	THRAP3 (ENSBGRG00000008220) #36	ENSBGRG00000008330	MAP7D1 (ENSBGRG00000008399) #37
Bos_b	ANCESTRAL SPECIES	1	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a.yd.b #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.a.b.a	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Cow	MODERN SPECIES	22	MYCBP (ENSBTAG00000030337) #8	RRAGC (ENSBTAG00000009368) #9	POU3F1 (ENSBTAG00000012061)	UTP11 (ENSBTAG00000002306) #10	FHL3 (ENSBTAG00000007300) #11	SF3A3 (ENSBTAG00000007299) #12	ENSBTAG00000053523	INPP5B (ENSBTAG00000024107) #13	MTF1 (ENSBTAG00000006511) #14	C3H1orf122 (ENSBTAG00000045776)	YRDC (ENSBTAG00000006510) #16	MANEAL (ENSBTAG00000046989) #17	EPHA10 (ENSBTAG00000020510) #19	CDCA8 (ENSBTAG00000014326) #20	C3H1orf109 (ENSBTAG00000014325) #21	RSPO1 (ENSBTAG00000003837) #22	GNL2 (ENSBTAG00000003849) #23	DNALI1 (ENSBTAG00000002583) #24	SNIP1 (ENSBTAG00000016852) #25	MEAF6 (ENSBTAG00000010506)	ZC3H12A (ENSBTAG00000011316) #26	GRIK3 (ENSBTAG00000009269) #27	CSF3R (ENSBTAG00000013334) #29	MRPS15 (ENSBTAG00000024097) #30	OSCP1 (ENSBTAG00000007994) #31	LSM10 (ENSBTAG00000024096) #32	STK40 (ENSBTAG00000015969) #33	EVA1B (ENSBTAG00000014358) #34	SH3D21 (ENSBTAG00000038617) #35	THRAP3 (ENSBTAG00000024095) #36	MAP7D1 (ENSBTAG00000030301) #37
Hybrid Bos Indicus	MODERN SPECIES	22	MYCBP (ENSBIXG00005028655) #8	RRAGC (ENSBIXG00005002387) #9	POU3F1 (ENSBIXG00005028613)	UTP11 (ENSBIXG00005002425) #10	FHL3 (ENSBIXG00005028592) #11	SF3A3 (ENSBIXG00005028574) #12	ENSBIXG00005004924	INPP5B (ENSBIXG00005028525) #13	MTF1 (ENSBIXG00005028493) #14	C1orf122 (ENSBIXG00005004900)	YRDC (ENSBIXG00005004896) #16	MANEAL (ENSBIXG00005028443) #17	EPHA10 (ENSBIXG00005004885) #19	CDCA8 (ENSBIXG00005007599) #20	C1orf109 (ENSBIXG00005028256) #21	RSPO1 (ENSBIXG00005028242) #22	GNL2 (ENSBIXG00005028205) #23	DNALI1 (ENSBIXG00005028180) #24	SNIP1 (ENSBIXG00005028139) #25	ZC3H12A (ENSBIXG00005028023) #26	GRIK3 (ENSBIXG00005027987) #27	CSF3R (ENSBIXG00005027869) #29	MRPS15 (ENSBIXG00005027828) #30	OSCP1 (ENSBIXG00005027790) #31	LSM10 (ENSBIXG00005027748) #32	STK40 (ENSBIXG00005027735) #33	EVA1B (ENSBIXG00005027691) #34	ENSBIXG00005004754 #35	THRAP3 (ENSBIXG00005027648) #36	MAP7D1 (ENSBIXG00005027608) #37	TRAPPC3 (ENSBIXG00005007591)
American bison	MODERN SPECIES	3342	GJA9 (ENSBBBG00000009359) #7	ENSBBBG00000001471	ENSBBBG00000001470 #9	UTP11 (ENSBBBG00000025484) #10	FHL3 (ENSBBBG00000025451) #11	SF3A3 (ENSBBBG00000025421) #12	INPP5B (ENSBBBG00000025382) #13	MTF1 (ENSBBBG00000025257) #14	ENSBBBG00000007754 #15	YRDC (ENSBBBG00000025170) #16	MANEAL (ENSBBBG00000007846) #17	ENSBBBG00000025137 #19	ENSBBBG00000006660 #19	CDCA8 (ENSBBBG00000025109) #20	C1orf109 (ENSBBBG00000025073) #21	RSPO1 (ENSBBBG00000025039) #22	GNL2 (ENSBBBG00000025003) #23	DNALI1 (ENSBBBG00000006588) #24	SNIP1 (ENSBBBG00000024951) #25	MEAF6 (ENSBBBG00000024940)	ENSBBBG00000024926 #26
Siberian musk deer	MODERN SPECIES	4	GJA9 (ENSMMSG00000007031) #7	MYCBP (ENSMMSG00000007051) #8	RRAGC (ENSMMSG00000007086) #9	POU3F1 (ENSMMSG00000007144)	UTP11 (ENSMMSG00000007157) #10	FHL3 (ENSMMSG00000007192) #11	SF3A3 (ENSMMSG00000007221) #12	INPP5B (ENSMMSG00000007359) #13	MTF1 (ENSMMSG00000007470) #14	C1orf122 (ENSMMSG00000007515)	YRDC (ENSMMSG00000007543) #16	MANEAL (ENSMMSG00000007573) #17	EPHA10 (ENSMMSG00000007646) #19	CDCA8 (ENSMMSG00000007842) #20	C1orf109 (ENSMMSG00000007865) #21	RSPO1 (ENSMMSG00000007885) #22	GNL2 (ENSMMSG00000007948) #23	DNALI1 (ENSMMSG00000007981) #24	ENSMMSG00000008041 #25	MEAF6 (ENSMMSG00000008080)	ZC3H12A (ENSMMSG00000008185) #26	GRIK3 (ENSMMSG00000008231) #27	CSF3R (ENSMMSG00000008372) #29	MRPS15 (ENSMMSG00000008409) #30	OSCP1 (ENSMMSG00000008440) #31	LSM10 (ENSMMSG00000008521) #32	STK40 (ENSMMSG00000008536) #33	EVA1B (ENSMMSG00000008604) #34	SH3D21 (ENSMMSG00000008627) #35	THRAP3 (ENSMMSG00000008671) #36	MAP7D1 (ENSMMSG00000008733) #37
Yarkand deer	MODERN SPECIES	12	GJA9 (ENSCHYG00000026651) #7	ENSCHYG00000026657	RRAGC (ENSCHYG00000026668) #9	POU3F1 (ENSCHYG00000026684)	UTP11 (ENSCHYG00000026688) #10	FHL3 (ENSCHYG00000026698) #11	SF3A3 (ENSCHYG00000026711) #12	INPP5B (ENSCHYG00000026744) #13	MTF1 (ENSCHYG00000026777) #14	C1orf122 (ENSCHYG00000026784)	ENSCHYG00000026789 #16	MANEAL (ENSCHYG00000026794) #17	EPHA10 (ENSCHYG00000026807) #19	CDCA8 (ENSCHYG00000026822) #20	C1orf109 (ENSCHYG00000026846) #21	RSPO1 (ENSCHYG00000026851) #22	GNL2 (ENSCHYG00000026865) #23	DNALI1 (ENSCHYG00000026895) #24	SNIP1 (ENSCHYG00000026912) #25	ZC3H12A (ENSCHYG00000026932) #26	ENSCHYG00000026936	GRIK3 (ENSCHYG00000026942) #27	CSF3R (ENSCHYG00000026959) #29	MRPS15 (ENSCHYG00000026961) #30	OSCP1 (ENSCHYG00000026967) #31	LSM10 (ENSCHYG00000026972) #32	STK40 (ENSCHYG00000026974) #33	EVA1B (ENSCHYG00000026978) #34	SH3D21 (ENSCHYG00000026983) #35	THRAP3 (ENSCHYG00000026991) #36	ENSCHYG00000026996
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Carnivora	ANCESTRAL SPECIES	1	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Caniformia	ANCESTRAL SPECIES	2	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Canidae	ANCESTRAL SPECIES	12	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Canis_lupus	ANCESTRAL SPECIES	16	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Dog	MODERN SPECIES	6	GJA9 (ENSCAFG00845030152) #7	MYCBP (ENSCAFG00845030166) #8	RRAGC (ENSCAFG00845030180) #9	POU3F1 (ENSCAFG00845030221)	UTP11 (ENSCAFG00845030237) #10	FHL3 (ENSCAFG00845030255) #11	SF3A3 (ENSCAFG00845030327) #12	INPP5B (ENSCAFG00845030394) #13	MTF1 (ENSCAFG00845030475) #14	C15H1orf122 (ENSCAFG00845030522)	YRDC (ENSCAFG00845030538) #16	MANEAL (ENSCAFG00845030597) #17	EPHA10 (ENSCAFG00845030611) #19	CDCA8 (ENSCAFG00845030636) #20	C15H1orf109 (ENSCAFG00845030642) #21	RSPO1 (ENSCAFG00845030653) #22	GNL2 (ENSCAFG00845030665) #23	DNALI1 (ENSCAFG00845030680) #24	SNIP1 (ENSCAFG00845030697) #25	MEAF6 (ENSCAFG00845030711)	ZC3H12A (ENSCAFG00845030728) #26	GRIK3 (ENSCAFG00845030735) #27	CSF3R (ENSCAFG00845030757) #29	ENSCAFG00845030768 #30	OSCP1 (ENSCAFG00845030771) #31	LSM10 (ENSCAFG00845030776) #32	STK40 (ENSCAFG00845030786) #33	ENSCAFG00845030799 #37	ENSCAFG00845030827 #35	ENSCAFG00845030851 #34	THRAP3 (ENSCAFG00845030875) #36
Dingo	MODERN SPECIES	344	GJA9 (ENSCAFG00020006141) #7	ENSCAFG00020006145 #8	RRAGC (ENSCAFG00020006162) #9	POU3F1 (ENSCAFG00020006174)	UTP11 (ENSCAFG00020006177) #10	FHL3 (ENSCAFG00020006180) #11	SF3A3 (ENSCAFG00020006186) #12	INPP5B (ENSCAFG00020006305) #13	MTF1 (ENSCAFG00020007790) #14	C1orf122 (ENSCAFG00020007830)	YRDC (ENSCAFG00020007843) #16	MANEAL (ENSCAFG00020007853) #17	EPHA10 (ENSCAFG00020007865) #19	CDCA8 (ENSCAFG00020007925) #20	C1orf109 (ENSCAFG00020008002) #21	RSPO1 (ENSCAFG00020008017) #22	GNL2 (ENSCAFG00020008050) #23	DNALI1 (ENSCAFG00020008587) #24	SNIP1 (ENSCAFG00020008599) #25	ENSCAFG00020008608	MEAF6 (ENSCAFG00020008613)	ZC3H12A (ENSCAFG00020008620) #26	GRIK3 (ENSCAFG00020008653) #27	ENSCAFG00020008853	CSF3R (ENSCAFG00020008854) #29	MRPS15 (ENSCAFG00020008912) #30	OSCP1 (ENSCAFG00020008914) #31	LSM10 (ENSCAFG00020008920) #32	STK40 (ENSCAFG00020008930) #33	SH3D21 (ENSCAFG00020008955) #35	ENSCAFG00020008975 #34
Red fox	MODERN SPECIES	9	GJA9 (ENSVVUG00000022881) #7	MYCBP (ENSVVUG00000022882) #8	RRAGC (ENSVVUG00000022886) #9	ENSVVUG00000022893	UTP11 (ENSVVUG00000022895) #10	FHL3 (ENSVVUG00000022898) #11	SF3A3 (ENSVVUG00000022908) #12	INPP5B (ENSVVUG00000023116) #13	MTF1 (ENSVVUG00000023129) #14	YRDC (ENSVVUG00000023132) #16	MANEAL (ENSVVUG00000023135) #17	ENSVVUG00000023136 #19	ENSVVUG00000023142 #19	CDCA8 (ENSVVUG00000023145) #20	CUNH1orf109 (ENSVVUG00000023148) #21	RSPO1 (ENSVVUG00000023149) #22	GNL2 (ENSVVUG00000023157) #23	DNALI1 (ENSVVUG00000023159) #24	SNIP1 (ENSVVUG00000023160) #25	MEAF6 (ENSVVUG00000023163)	ZC3H12A (ENSVVUG00000023171) #26	GRIK3 (ENSVVUG00000023178) #27	CSF3R (ENSVVUG00000023189) #29	MRPS15 (ENSVVUG00000023194) #30	OSCP1 (ENSVVUG00000023202) #31	LSM10 (ENSVVUG00000023209) #32	STK40 (ENSVVUG00000023215) #33	ENSVVUG00000023229	SH3D21 (ENSVVUG00000023237) #35	THRAP3 (ENSVVUG00000000118) #36	MAP7D1 (ENSVVUG00000000164) #37
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Ursidae	ANCESTRAL SPECIES		ENSGT00940000165268	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Ursus	ANCESTRAL SPECIES		ENSGT00940000158787	ENSGT00940000159442	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808.a #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
American black bear	MODERN SPECIES	307												ENSUAMG00000014144 #17	EPHA10 (ENSUAMG00000014137) #19	CDCA8 (ENSUAMG00000014133) #20	C1orf109 (ENSUAMG00000014131) #21	RSPO1 (ENSUAMG00000014127) #22	GNL2 (ENSUAMG00000014123) #23	DNALI1 (ENSUAMG00000014118) #24	SNIP1 (ENSUAMG00000014114) #25	MEAF6 (ENSUAMG00000014109)	ZC3H12A (ENSUAMG00000014105) #26
Polar bear	MODERN SPECIES	189	ENSUMAG00000021171	NDUFS5 (ENSUMAG00000021215)	AKIRIN1 (ENSUMAG00000021218)	RHBDL2 (ENSUMAG00000021223)	ENSUMAG00000021226 #8	RRAGC (ENSUMAG00000021229) #9	UTP11 (ENSUMAG00000021238) #10	FHL3 (ENSUMAG00000021243) #11	SF3A3 (ENSUMAG00000021250) #12	INPP5B (ENSUMAG00000021256) #13	MTF1 (ENSUMAG00000021269) #14	MANEAL (ENSUMAG00000000139) #17	ENSUMAG00000000234 #19	CDCA8 (ENSUMAG00000000303) #20	C1orf109 (ENSUMAG00000000310) #21	RSPO1 (ENSUMAG00000000320) #22	GNL2 (ENSUMAG00000000413) #23	DNALI1 (ENSUMAG00000001085) #24	SNIP1 (ENSUMAG00000001093) #25	MEAF6 (ENSUMAG00000001101)	ZC3H12A (ENSUMAG00000001122) #26	GRIK3 (ENSUMAG00000001150) #27	CSF3R (ENSUMAG00000001333) #29	MRPS15 (ENSUMAG00000001358) #30	ENSUMAG00000001369 #31	LSM10 (ENSUMAG00000001438) #32	STK40 (ENSUMAG00000001453) #33	ENSUMAG00000001726 #35	THRAP3 (ENSUMAG00000001744) #36	MAP7D1 (ENSUMAG00000001773) #37	TRAPPC3 (ENSUMAG00000001979)
Giant Panda	MODERN SPECIES	11	RHBDL2 (ENSAMEG00000010323)	ENSAMEG00000010319 #7	ENSAMEG00000010315	RRAGC (ENSAMEG00000010297) #9	UTP11 (ENSAMEG00000001308) #10	FHL3 (ENSAMEG00000001299) #11	SF3A3 (ENSAMEG00000001262) #12	INPP5B (ENSAMEG00000001214) #13	MTF1 (ENSAMEG00000001186) #14	C1orf122 (ENSAMEG00000001182)	YRDC (ENSAMEG00000001173) #16	MANEAL (ENSAMEG00000001165) #17	EPHA10 (ENSAMEG00000001105) #19	CDCA8 (ENSAMEG00000001082) #20	C1orf109 (ENSAMEG00000001077) #21	RSPO1 (ENSAMEG00000027319) #22	GNL2 (ENSAMEG00000001032) #23	DNALI1 (ENSAMEG00000001019) #24	SNIP1 (ENSAMEG00000001009) #25	MEAF6 (ENSAMEG00000027272)	ZC3H12A (ENSAMEG00000000991) #26	GRIK3 (ENSAMEG00000001517) #27	CSF3R (ENSAMEG00000001480) #29	MRPS15 (ENSAMEG00000001463) #30	OSCP1 (ENSAMEG00000001437) #31	LSM10 (ENSAMEG00000019854) #32	STK40 (ENSAMEG00000001415) #33	EVA1B (ENSAMEG00000031396) #34	ENSAMEG00000001385 #35	ENSAMEG00000028122 #36	ENSAMEG00000024644 #36
Mustelinae	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00940000165942 #15	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Ferret	MODERN SPECIES	167	RHBDL2 (ENSMPUG00000014455)	GJA9 (ENSMPUG00000018591) #7	RRAGC (ENSMPUG00000014485) #9	ENSMPUG00000014487	ENSMPUG00000014489	UTP11 (ENSMPUG00000014493) #10	FHL3 (ENSMPUG00000014497) #11	SF3A3 (ENSMPUG00000014519) #12	INPP5B (ENSMPUG00000014529) #13	MTF1 (ENSMPUG00000014538) #14	YRDC (ENSMPUG00000014542) #16	MANEAL (ENSMPUG00000014549) #17	EPHA10 (ENSMPUG00000014564) #19	CDCA8 (ENSMPUG00000014699) #20	C1orf109 (ENSMPUG00000014702) #21	RSPO1 (ENSMPUG00000014706) #22	GNL2 (ENSMPUG00000014709) #23	DNALI1 (ENSMPUG00000014714) #24	SNIP1 (ENSMPUG00000014718) #25	MEAF6 (ENSMPUG00000014722)	ZC3H12A (ENSMPUG00000014758) #26	GRIK3 (ENSMPUG00000014760) #27	CSF3R (ENSMPUG00000014768) #29	OSCP1 (ENSMPUG00000014774) #31	LSM10 (ENSMPUG00000018593) #32	STK40 (ENSMPUG00000014777) #33	EVA1B (ENSMPUG00000014781) #34	ENSMPUG00000014783 #35	THRAP3 (ENSMPUG00000014809) #36	MAP7D1 (ENSMPUG00000014812) #37	ENSMPUG00000018594
American mink	MODERN SPECIES	99	MYCBP (ENSNVIG00000013279) #8	RRAGC (ENSNVIG00000013262) #9	POU3F1 (ENSNVIG00000013253)	UTP11 (ENSNVIG00000013241) #10	FHL3 (ENSNVIG00000013219) #11	SF3A3 (ENSNVIG00000013169) #12	INPP5B (ENSNVIG00000013024) #13	MTF1 (ENSNVIG00000013002) #14	ENSNVIG00000012996 #15	YRDC (ENSNVIG00000012985) #16	MANEAL (ENSNVIG00000012960) #17	ENSNVIG00000012947 #19	ENSNVIG00000012938 #19	CDCA8 (ENSNVIG00000012907) #20	C1orf109 (ENSNVIG00000012887) #21	RSPO1 (ENSNVIG00000012862) #22	GNL2 (ENSNVIG00000012836) #23	DNALI1 (ENSNVIG00000012831) #24	SNIP1 (ENSNVIG00000012822) #25	MEAF6 (ENSNVIG00000012809)	ZC3H12A (ENSNVIG00000012804) #26	GRIK3 (ENSNVIG00000012775) #27	CSF3R (ENSNVIG00000012698) #29	ENSNVIG00000012683 #30	OSCP1 (ENSNVIG00000012600) #31	LSM10 (ENSNVIG00000012589) #32	STK40 (ENSNVIG00000012562) #33	EVA1B (ENSNVIG00000012547) #34	ENSNVIG00000012530 #35	THRAP3 (ENSNVIG00000012429) #36	MAP7D1 (ENSNVIG00000012295) #37
Felidae	ANCESTRAL SPECIES	18	ENSGT01090000260070.C #7	ENSGT00940000165268	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00550000074698.k.a.b.a.a.a	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Panthera	ANCESTRAL SPECIES	4	ENSGT01090000260070.C #7	ENSGT00940000165268	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00550000074698.k.a.b.a.a.a	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Panthera_a	ANCESTRAL SPECIES	14	ENSGT01090000260070.C #7	ENSGT00940000165268	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00550000074698.k.a.b.a.a.a	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
lion	MODERN SPECIES	8	GJA9 (ENSPLOG00000018634) #7	ENSPLOG00000018657	RRAGC (ENSPLOG00000018700) #9	POU3F1 (ENSPLOG00000018723)	UTP11 (ENSPLOG00000018747) #10	FHL3 (ENSPLOG00000018829) #11	SF3A3 (ENSPLOG00000018878) #12	INPP5B (ENSPLOG00000019095) #13	MTF1 (ENSPLOG00000019694) #14	C1orf122 (ENSPLOG00000019823)	YRDC (ENSPLOG00000019865) #16	MANEAL (ENSPLOG00000019916) #17	EPHA10 (ENSPLOG00000020016) #19	CDCA8 (ENSPLOG00000020205) #20	C1orf109 (ENSPLOG00000020230) #21	RSPO1 (ENSPLOG00000020291) #22	GNL2 (ENSPLOG00000020381) #23	DNALI1 (ENSPLOG00000020424) #24	SNIP1 (ENSPLOG00000020485) #25	MEAF6 (ENSPLOG00000020523)	ZC3H12A (ENSPLOG00000020649) #26	GRIK3 (ENSPLOG00000020707) #27	CSF3R (ENSPLOG00000020805) #29	MRPS15 (ENSPLOG00000020901) #30	OSCP1 (ENSPLOG00000020969) #31	ENSPLOG00000021048 #32	STK40 (ENSPLOG00000021083) #33	EVA1B (ENSPLOG00000021132) #34	ENSPLOG00000021161	THRAP3 (ENSPLOG00000021215) #36	MAP7D1 (ENSPLOG00000021300) #37
leopard	MODERN SPECIES	130	ENSPPRG00000023950	RRAGC (ENSPPRG00000023687) #9	ENSPPRG00000023484	POU3F1 (ENSPPRG00000022367)	UTP11 (ENSPPRG00000022921) #10	FHL3 (ENSPPRG00000022616) #11	SF3A3 (ENSPPRG00000001258) #12	INPP5B (ENSPPRG00000006732) #13	MTF1 (ENSPPRG00000007152) #14	C1orf122 (ENSPPRG00000007714)	YRDC (ENSPPRG00000007752) #16	MANEAL (ENSPPRG00000008017) #17	EPHA10 (ENSPPRG00000008736) #19	CDCA8 (ENSPPRG00000009243) #20	C1orf109 (ENSPPRG00000009527) #21	RSPO1 (ENSPPRG00000009901) #22	GNL2 (ENSPPRG00000010528) #23	DNALI1 (ENSPPRG00000010993) #24	SNIP1 (ENSPPRG00000011313) #25	MEAF6 (ENSPPRG00000012769)	ZC3H12A (ENSPPRG00000014359) #26	GRIK3 (ENSPPRG00000017558) #27	ENSPPRG00000019275	CSF3R (ENSPPRG00000024429) #29	MRPS15 (ENSPPRG00000024277) #30	OSCP1 (ENSPPRG00000024092) #31	LSM10 (ENSPPRG00000014619) #32	STK40 (ENSPPRG00000023089) #33	EVA1B (ENSPPRG00000023067) #34	SH3D21 (ENSPPRG00000001082) #35	THRAP3 (ENSPPRG00000001735) #36
Tiger	MODERN SPECIES	383	RHBDL2 (ENSPTIG00000009886)	GJA9 (ENSPTIG00000005245) #7	RRAGC (ENSPTIG00000008681) #9	UTP11 (ENSPTIG00000008274) #10	FHL3 (ENSPTIG00000007715) #11	SF3A3 (ENSPTIG00000007515) #12	INPP5B (ENSPTIG00000020799) #13	MTF1 (ENSPTIG00000020144) #14	ENSPTIG00000019971 #15	YRDC (ENSPTIG00000019821) #16	MANEAL (ENSPTIG00000019246) #17	ENSPTIG00000018856 #19	ENSPTIG00000018153 #19	CDCA8 (ENSPTIG00000017337) #20	C1orf109 (ENSPTIG00000017061) #21	RSPO1 (ENSPTIG00000015434) #22	GNL2 (ENSPTIG00000015095) #23	DNALI1 (ENSPTIG00000014464) #24	SNIP1 (ENSPTIG00000014216) #25	MEAF6 (ENSPTIG00000013885)	ZC3H12A (ENSPTIG00000012943) #26	GRIK3 (ENSPTIG00000010943) #27	ENSPTIG00000009786	CSF3R (ENSPTIG00000002473) #29	MRPS15 (ENSPTIG00000022020) #30	OSCP1 (ENSPTIG00000021848) #31	LSM10 (ENSPTIG00000004613) #32	STK40 (ENSPTIG00000020622) #33	ENSPTIG00000020226	SH3D21 (ENSPTIG00000017828) #35	THRAP3 (ENSPTIG00000016888) #36
Cat	MODERN SPECIES	239	GJA9 (ENSFCAG00000003210) #7	ENSFCAG00000031119	RRAGC (ENSFCAG00000009681) #9	POU3F1 (ENSFCAG00000046375)	UTP11 (ENSFCAG00000011023) #10	FHL3 (ENSFCAG00000007237) #11	SF3A3 (ENSFCAG00000027772) #12	INPP5B (ENSFCAG00000011021) #13	MTF1 (ENSFCAG00000011020) #14	CC1H1orf122 (ENSFCAG00000037824)	YRDC (ENSFCAG00000011018) #16	MANEAL (ENSFCAG00000043358) #17	EPHA10 (ENSFCAG00000036316) #19	CDCA8 (ENSFCAG00000008762) #20	CC1H1orf109 (ENSFCAG00000008763) #21	RSPO1 (ENSFCAG00000008761) #22	GNL2 (ENSFCAG00000008760) #23	DNALI1 (ENSFCAG00000008759) #24	SNIP1 (ENSFCAG00000008758) #25	MEAF6 (ENSFCAG00000038230)	ZC3H12A (ENSFCAG00000008757) #26	GRIK3 (ENSFCAG00000005150) #27	ENSFCAG00000029626	CSF3R (ENSFCAG00000013269) #29	MRPS15 (ENSFCAG00000005265) #30	OSCP1 (ENSFCAG00000005258) #31	LSM10 (ENSFCAG00000047113) #32	STK40 (ENSFCAG00000005262) #33	EVA1B (ENSFCAG00000026800) #34	SH3D21 (ENSFCAG00000051592) #35	THRAP3 (ENSFCAG00000014127) #36
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Equus	ANCESTRAL SPECIES	2	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b.e #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000171437	ENSGT00940000159465 #27	ENSGT01030000238136	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35
Horse	MODERN SPECIES	11	AKIRIN1 (ENSECAG00000012589)	RHBDL2 (ENSECAG00000015194)	GJA9 (ENSECAG00000004967) #7	RRAGC (ENSECAG00000019915) #9	POU3F1 (ENSECAG00000026886)	UTP11 (ENSECAG00000021551) #10	FHL3 (ENSECAG00000011590) #11	SF3A3 (ENSECAG00000017333) #12	INPP5B (ENSECAG00000019874) #13	MTF1 (ENSECAG00000017235) #14	MANEAL (ENSECAG00000022543) #17	YRDC (ENSECAG00000022522) #16	EPHA10 (ENSECAG00000022781) #19	CDCA8 (ENSECAG00000015871) #20	C2H1orf109 (ENSECAG00000021402) #21	RSPO1 (ENSECAG00000022683) #22	GNL2 (ENSECAG00000008068) #23	DNALI1 (ENSECAG00000018337) #24	SNIP1 (ENSECAG00000021869) #25	MEAF6 (ENSECAG00000022449)	ZC3H12A (ENSECAG00000009562) #26	ENSECAG00000032155	GRIK3 (ENSECAG00000010275) #27	ENSECAG00000040086	CSF3R (ENSECAG00000013457) #29	MRPS15 (ENSECAG00000000933) #30	OSCP1 (ENSECAG00000008850) #31	LSM10 (ENSECAG00000005071) #32	STK40 (ENSECAG00000015678) #33	SH3D21 (ENSECAG00000020556) #35	THRAP3 (ENSECAG00000021207) #36
Donkey	MODERN SPECIES	25	GJA9 (ENSEASG00005013284) #7	ENSEASG00005028821 #8	RRAGC (ENSEASG00005013279) #9	POU3F1 (ENSEASG00005027957)	UTP11 (ENSEASG00005013277) #10	FHL3 (ENSEASG00005013273) #11	SF3A3 (ENSEASG00005012906) #12	INPP5B (ENSEASG00005012326) #13	MTF1 (ENSEASG00005012257) #14	ENSEASG00005031679	YRDC (ENSEASG00005012253) #16	ENSEASG00005037879 #17	EPHA10 (ENSEASG00005012249) #19	CDCA8 (ENSEASG00005012237) #20	C1orf109 (ENSEASG00005012233) #21	RSPO1 (ENSEASG00005012231) #22	GNL2 (ENSEASG00005012227) #23	DNALI1 (ENSEASG00005024722) #24	SNIP1 (ENSEASG00005012223) #25	MEAF6 (ENSEASG00005012221)	ENSEASG00005012219	GRIK3 (ENSEASG00005012214) #27	ENSEASG00005012213	CSF3R (ENSEASG00005012209) #29	MRPS15 (ENSEASG00005032042) #30	OSCP1 (ENSEASG00005012195) #31	LSM10 (ENSEASG00005031673) #32	STK40 (ENSEASG00005012192) #33	EVA1B (ENSEASG00005012191) #34	ENSEASG00005012187 #35	THRAP3 (ENSEASG00005012182) #36
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000159442	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Megabat	MODERN SPECIES	1860							SF3A3 (ENSPVAG00000010158) #12	INPP5B (ENSPVAG00000010155) #13	MTF1 (ENSPVAG00000010152) #14	ENSPVAG00000010150	YRDC (ENSPVAG00000010147) #16	MANEAL (ENSPVAG00000010143) #17	ENSPVAG00000010140 #19	CDCA8 (ENSPVAG00000010138) #20	C1orf109 (ENSPVAG00000010137) #21	RSPO1 (ENSPVAG00000010135) #22	GNL2 (ENSPVAG00000010131) #23	DNALI1 (ENSPVAG00000010126) #24	SNIP1 (ENSPVAG00000010125) #25	MEAF6 (ENSPVAG00000010122)	ZC3H12A (ENSPVAG00000010120) #26
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000159442	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Microbat	MODERN SPECIES	1197	RHBDL2 (ENSMLUG00000009849)	ENSMLUG00000030153 #8	RRAGC (ENSMLUG00000009800) #9	POU3F1 (ENSMLUG00000001011)	UTP11 (ENSMLUG00000001003) #10	FHL3 (ENSMLUG00000000997) #11	SF3A3 (ENSMLUG00000000991) #12	INPP5B (ENSMLUG00000000971) #13	MTF1 (ENSMLUG00000000963) #14	C1orf122 (ENSMLUG00000000958)	ENSMLUG00000000955 #16	ENSMLUG00000000933 #17	EPHA10 (ENSMLUG00000012236) #19	CDCA8 (ENSMLUG00000029753) #20	C1orf109 (ENSMLUG00000012230) #21	RSPO1 (ENSMLUG00000012224) #22	GNL2 (ENSMLUG00000017139) #23	DNALI1 (ENSMLUG00000017137) #24	ENSMLUG00000017132 #25	MEAF6 (ENSMLUG00000017128)	ZC3H12A (ENSMLUG00000027279) #26
Greater horseshoe bat	MODERN SPECIES	27	ENSRFEG00010003323	RRAGC (ENSRFEG00010003302) #9	ENSRFEG00010003286	POU3F1 (ENSRFEG00010003275)	UTP11 (ENSRFEG00010003245) #10	FHL3 (ENSRFEG00010003229) #11	SF3A3 (ENSRFEG00010003209) #12	INPP5B (ENSRFEG00010003163) #13	MTF1 (ENSRFEG00010003103) #14	C1orf122 (ENSRFEG00010003081)	YRDC (ENSRFEG00010003068) #16	MANEAL (ENSRFEG00010003050) #17	EPHA10 (ENSRFEG00010003007) #19	CDCA8 (ENSRFEG00010002962) #20	C1orf109 (ENSRFEG00010002940) #21	RSPO1 (ENSRFEG00010002896) #22	GNL2 (ENSRFEG00010002826) #23	DNALI1 (ENSRFEG00010002793) #24	SNIP1 (ENSRFEG00010002767) #25	MEAF6 (ENSRFEG00010002688)	ZC3H12A (ENSRFEG00010002614) #26	GRIK3 (ENSRFEG00010002581) #27	ENSRFEG00010002566	CSF3R (ENSRFEG00010002521) #29	MRPS15 (ENSRFEG00010002496) #30	OSCP1 (ENSRFEG00010002458) #31	LSM10 (ENSRFEG00010002437) #32	STK40 (ENSRFEG00010002403) #33	EVA1B (ENSRFEG00010002372) #34	ENSRFEG00010002356	THRAP3 (ENSRFEG00010002289) #36
Atlantogenata	ANCESTRAL SPECIES	4	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Afrotheria	ANCESTRAL SPECIES	15	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Afrotheria_a	ANCESTRAL SPECIES	15	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00570000079623	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Elephant	MODERN SPECIES	332	FHL3 (ENSLAFG00000027815) #11	SF3A3 (ENSLAFG00000008094) #12	INPP5B (ENSLAFG00000017572) #13	MTF1 (ENSLAFG00000017561) #14	C1orf122 (ENSLAFG00000017557)	YRDC (ENSLAFG00000017556) #16	MANEAL (ENSLAFG00000017546) #17	EPHA10 (ENSLAFG00000017534) #19	CDCA8 (ENSLAFG00000017704) #20	C1orf109 (ENSLAFG00000012594) #21	GNL2 (ENSLAFG00000018723) #23	DNALI1 (ENSLAFG00000018722) #24	SNIP1 (ENSLAFG00000030689) #25	MEAF6 (ENSLAFG00000018721)	ZC3H12A (ENSLAFG00000018720) #26	RSPO1 (ENSLAFG00000006813) #22	ENSLAFG00000030279	GRIK3 (ENSLAFG00000015216) #27	CSF3R (ENSLAFG00000014447) #29	MRPS15 (ENSLAFG00000011450) #30	OSCP1 (ENSLAFG00000021988) #31	LSM10 (ENSLAFG00000009600) #32	STK40 (ENSLAFG00000009594) #33	EVA1B (ENSLAFG00000008194) #34	ENSLAFG00000000070 #35	ENSLAFG00000028055 #35	THRAP3 (ENSLAFG00000009587) #36	MAP7D1 (ENSLAFG00000009850) #37	TRAPPC3 (ENSLAFG00000009853)	ENSLAFG00000030120	ADPRS (ENSLAFG00000017280)
Hyrax	MODERN SPECIES	5268																RSPO1 (ENSPCAG00000014367) #22
Tenrec	MODERN SPECIES	5525																RSPO1 (ENSETEG00000016679) #22	GNL2 (ENSETEG00000016674) #23
Xenarthra	ANCESTRAL SPECIES	36																ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Armadillo	MODERN SPECIES	2908																RSPO1 (ENSDNOG00000049599) #22	ENSDNOG00000016466 #23	DNALI1 (ENSDNOG00000031070) #24	ENSDNOG00000014381 #25	MEAF6 (ENSDNOG00000038956)	ZC3H12A (ENSDNOG00000035006) #26	GRIK3 (ENSDNOG00000008042) #27	CSF3R (ENSDNOG00000018916) #29	MRPS15 (ENSDNOG00000046736) #30	OSCP1 (ENSDNOG00000040997) #31	LSM10 (ENSDNOG00000036662) #32	STK40 (ENSDNOG00000041875) #33	ENSDNOG00000023624	EVA1B (ENSDNOG00000010513) #34	SH3D21 (ENSDNOG00000023808) #35	THRAP3 (ENSDNOG00000031470) #36
Sloth	MODERN SPECIES	5720																ENSCHOG00000009372 #22
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00940000158787	ENSGT00940000159442	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a.i
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00940000159442	ENSGT00940000165268	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a.i
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00940000159442	ENSGT00940000165268	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a.i
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00940000158787	ENSGT00940000159442	ENSGT00940000165268	ENSGT00950000183031.A.a.a #9	ENSGT00940000163458	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000160752 #19	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a.i
Common wonbat	MODERN SPECIES	1014	AKIRIN1 (ENSVURG00010002475)	RHBDL2 (ENSVURG00010002516)	ENSVURG00010002524	RRAGC (ENSVURG00010002533) #9	POU3F1 (ENSVURG00010002566)	UTP11 (ENSVURG00010002579) #10	FHL3 (ENSVURG00010002588) #11	SF3A3 (ENSVURG00010002605) #12	INPP5B (ENSVURG00010002629) #13	MTF1 (ENSVURG00010002662) #14	YRDC (ENSVURG00010002677) #16	MANEAL (ENSVURG00010002698) #17	ENSVURG00010002719 #19	CDCA8 (ENSVURG00010002728) #20	C1orf109 (ENSVURG00010002753) #21	RSPO1 (ENSVURG00010002763) #22	GNL2 (ENSVURG00010002781) #23	DNALI1 (ENSVURG00010002806) #24	SNIP1 (ENSVURG00010002829) #25	MEAF6 (ENSVURG00010002849)	ZC3H12A (ENSVURG00010002872) #26	GRIK3 (ENSVURG00010002934) #27	ENSVURG00010002992	CSF3R (ENSVURG00010003017) #29	MRPS15 (ENSVURG00010003030) #30	OSCP1 (ENSVURG00010003056) #31	LSM10 (ENSVURG00010003089) #32	STK40 (ENSVURG00010003108) #33	ENSVURG00010003118 #34	THRAP3 (ENSVURG00010003132) #36	MAP7D1 (ENSVURG00010003157) #37
koala	MODERN SPECIES	14	RHBDL2 (ENSPCIG00000024471)	ENSPCIG00000024472	RRAGC (ENSPCIG00000024474) #9	POU3F1 (ENSPCIG00000025707)	UTP11 (ENSPCIG00000025711) #10	FHL3 (ENSPCIG00000025714) #11	SF3A3 (ENSPCIG00000025719) #12	INPP5B (ENSPCIG00000025724) #13	ENSPCIG00000025728	MTF1 (ENSPCIG00000025730) #14	YRDC (ENSPCIG00000025731) #16	MANEAL (ENSPCIG00000025732) #17	ENSPCIG00000031448 #19	CDCA8 (ENSPCIG00000025739) #20	C1orf109 (ENSPCIG00000025741) #21	RSPO1 (ENSPCIG00000025743) #22	GNL2 (ENSPCIG00000000135) #23	DNALI1 (ENSPCIG00000000162) #24	SNIP1 (ENSPCIG00000000204) #25	ENSPCIG00000036821	ZC3H12A (ENSPCIG00000035700) #26	GRIK3 (ENSPCIG00000014898) #27	ENSPCIG00000014874 #29	OSCP1 (ENSPCIG00000014866) #31	LSM10 (ENSPCIG00000014865) #32	STK40 (ENSPCIG00000014864) #33	EVA1B (ENSPCIG00000014860) #34	THRAP3 (ENSPCIG00000024805) #36	MAP7D1 (ENSPCIG00000024807) #37	TRAPPC3 (ENSPCIG00000000307)	COL8A2 (ENSPCIG00000000274)
Wallaby	DUPLICATION
Wallaby	MODERN SPECIES	12918																ENSMEUG00000010063 #22
Wallaby	MODERN SPECIES	7758																ENSMEUG00000002597 #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000027443	RRAGC (ENSSHAG00000031233) #9	ENSSHAG00000023962	ENSSHAG00000026433	POU3F1 (ENSSHAG00000030947)	UTP11 (ENSSHAG00000022388) #10	FHL3 (ENSSHAG00000021969) #11	SF3A3 (ENSSHAG00000029870) #12	INPP5B (ENSSHAG00000014171) #13	MTF1 (ENSSHAG00000014007) #14	YRDC (ENSSHAG00000013957) #16	ENSSHAG00000013916 #17	EPHA10 (ENSSHAG00000013395) #19	CDCA8 (ENSSHAG00000028910) #20	C1orf109 (ENSSHAG00000013153) #21	RSPO1 (ENSSHAG00000012546) #22	GNL2 (ENSSHAG00000012267) #23	DNALI1 (ENSSHAG00000012158) #24	ENSSHAG00000012118 #25	MEAF6 (ENSSHAG00000011910)	ZC3H12A (ENSSHAG00000021632) #26	GRIK3 (ENSSHAG00000025082) #27	ENSSHAG00000018138 #29	MRPS15 (ENSSHAG00000018120) #30	LSM10 (ENSSHAG00000022746) #32	OSCP1 (ENSSHAG00000021302) #31	STK40 (ENSSHAG00000017985) #33	EVA1B (ENSSHAG00000017973) #34	THRAP3 (ENSSHAG00000017932) #36	MAP7D1 (ENSSHAG00000017810) #37	ENSSHAG00000023429
Opossum	MODERN SPECIES	3	RHBDL2 (ENSMODG00000047333)	MYCBP (ENSMODG00000038621) #8	RRAGC (ENSMODG00000017710) #9	POU3F1 (ENSMODG00000017713)	UTP11 (ENSMODG00000017717) #10	FHL3 (ENSMODG00000017719) #11	ENSMODG00000017729 #12	INPP5B (ENSMODG00000017736) #13	MTF1 (ENSMODG00000017745) #14	YRDC (ENSMODG00000017750) #16	MANEAL (ENSMODG00000017756) #17	ENSMODG00000017759 #19	ENSMODG00000040375 #19	CDCA8 (ENSMODG00000017762) #20	C1orf109 (ENSMODG00000017765) #21	RSPO1 (ENSMODG00000023326) #22	GNL2 (ENSMODG00000017773) #23	DNALI1 (ENSMODG00000047771) #24	SNIP1 (ENSMODG00000017778) #25	ENSMODG00000017787	ZC3H12A (ENSMODG00000017794) #26	GRIK3 (ENSMODG00000017802) #27	CSF3R (ENSMODG00000017810) #29	MRPS15 (ENSMODG00000017813) #30	OSCP1 (ENSMODG00000017817) #31	LSM10 (ENSMODG00000023328) #32	STK40 (ENSMODG00000017824) #33	EVA1B (ENSMODG00000017827) #34	ENSMODG00000050671 #36	ENSMODG00000017834 #36	ENSMODG00000048565 #37
Platypus	MODERN SPECIES	7	RHBDL2 (ENSOANG00000002483)	GJA9 (ENSOANG00000002482) #7	ENSOANG00000046575	RRAGC (ENSOANG00000002479) #9	POU3F1 (ENSOANG00000039859)	UTP11 (ENSOANG00000002476) #10	FHL3 (ENSOANG00000041084) #11	SF3A3 (ENSOANG00000002473) #12	INPP5B (ENSOANG00000002045) #13	MTF1 (ENSOANG00000002047) #14	YRDC (ENSOANG00000002048) #16	MANEAL (ENSOANG00000039574) #17	ENSOANG00000002050	CDCA8 (ENSOANG00000002052) #20	ENSOANG00000002053 #21	RSPO1 (ENSOANG00000002054) #22	GNL2 (ENSOANG00000002057) #23	DNALI1 (ENSOANG00000002058) #24	SNIP1 (ENSOANG00000036482) #25	MEAF6 (ENSOANG00000002059)	ZC3H12A (ENSOANG00000002060) #26	GRIK3 (ENSOANG00000002061) #27	ENSOANG00000002062 #29	MRPS15 (ENSOANG00000042130) #30	OSCP1 (ENSOANG00000002064) #31	ENSOANG00000042771 #32	STK40 (ENSOANG00000002067) #33	EVA1B (ENSOANG00000038945) #34	THRAP3 (ENSOANG00000002070) #36	MAP7D1 (ENSOANG00000036062) #37	TRAPPC3 (ENSOANG00000002072)
Sauria	ANCESTRAL SPECIES	23	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000161202.b	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Archelosauria	ANCESTRAL SPECIES	25	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000161202.b	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Archosauria	ANCESTRAL SPECIES	22	ENSGT00940000159442	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Aves	ANCESTRAL SPECIES	28		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Neognathae	ANCESTRAL SPECIES	26		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Neognathae_b	ANCESTRAL SPECIES	26		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Neognathae_c	ANCESTRAL SPECIES	31		ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Golden eagle	MODERN SPECIES	7		GJA9 (ENSACCG00020016083) #7	MYCBP (ENSACCG00020016093) #8	RRAGC (ENSACCG00020016104) #9	ENSACCG00020016117	UTP11 (ENSACCG00020016125) #10	FHL3 (ENSACCG00020016138) #11	SF3A3 (ENSACCG00020016154) #12	INPP5B (ENSACCG00020016200) #13	MTF1 (ENSACCG00020016241) #14	YRDC (ENSACCG00020016247) #16	MANEAL (ENSACCG00020016261) #17	ENSACCG00020016272	CDCA8 (ENSACCG00020016289) #20	ENSACCG00020016301	RSPO1 (ENSACCG00020016309) #22	GNL2 (ENSACCG00020016319) #23	DNALI1 (ENSACCG00020016330) #24	SNIP1 (ENSACCG00020016338) #25	MEAF6 (ENSACCG00020016352)	ZC3H12A (ENSACCG00020016403) #26	GRIK3 (ENSACCG00020016533) #27	CSF3R (ENSACCG00020016644) #29	MRPS15 (ENSACCG00020016648) #30	OSCP1 (ENSACCG00020016654) #31	LSM10 (ENSACCG00020007012) #32	STK40 (ENSACCG00020007023) #33	EVA1B (ENSACCG00020007041) #34	THRAP3 (ENSACCG00020007064) #36	MAP7D1 (ENSACCG00020007137) #37	TRAPPC3 (ENSACCG00020007167)
Kakapo	MODERN SPECIES	6	SH3BGRL3 (ENSSHBG00005016940)	CEP85 (ENSSHBG00005016946)	GJA9 (ENSSHBG00005016956) #7	MYCBP (ENSSHBG00005016965) #8	RRAGC (ENSSHBG00005016975) #9	ENSSHBG00005016980	UTP11 (ENSSHBG00005016982) #10	FHL3 (ENSSHBG00005016985) #11	SF3A3 (ENSSHBG00005016992) #12	INPP5B (ENSSHBG00005017002) #13	MTF1 (ENSSHBG00005017009) #14	YRDC (ENSSHBG00005017012) #16	ENSSHBG00005017016	CDCA8 (ENSSHBG00005017023) #20	C1orf109 (ENSSHBG00005017031) #21	RSPO1 (ENSSHBG00005017035) #22	GNL2 (ENSSHBG00005017044) #23	DNALI1 (ENSSHBG00005017051) #24	SNIP1 (ENSSHBG00005017055) #25	MEAF6 (ENSSHBG00005017069)	ENSSHBG00005017076 #26	GRIK3 (ENSSHBG00005017083) #27	CSF3R (ENSSHBG00005017091) #29	MRPS15 (ENSSHBG00005017100) #30	OSCP1 (ENSSHBG00005017104) #31	LSM10 (ENSSHBG00005017106) #32	STK40 (ENSSHBG00005017111) #33	EVA1B (ENSSHBG00005017124) #34	THRAP3 (ENSSHBG00005017133) #36	MAP7D1 (ENSSHBG00005017141) #37	TRAPPC3 (ENSSHBG00005017143)
Passeriformes	ANCESTRAL SPECIES	23	ENSGT00390000002053	ENSGT00950000183034.B	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.a.b #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Great tit	MODERN SPECIES	15	RLF (ENSPMJG00000006923)	ENSPMJG00000006922	GJA9 (ENSPMJG00000006919) #7	MYCBP (ENSPMJG00000006912) #8	RRAGC (ENSPMJG00000006909) #9	ENSPMJG00000006894	UTP11 (ENSPMJG00000006889) #10	FHL3 (ENSPMJG00000006888) #11	SF3A3 (ENSPMJG00000006882) #12	INPP5B (ENSPMJG00000006867) #13	MTF1 (ENSPMJG00000006861) #14	YRDC (ENSPMJG00000006858) #16	ENSPMJG00000006857	CDCA8 (ENSPMJG00000006856) #20	ENSPMJG00000006855 #21	RSPO1 (ENSPMJG00000006854) #22	ENSPMJG00000006852	DNALI1 (ENSPMJG00000006847) #24	SNIP1 (ENSPMJG00000006845) #25	MEAF6 (ENSPMJG00000006841)	ZC3H12A (ENSPMJG00000006834) #26	GRIK3 (ENSPMJG00000006831) #27	CSF3R (ENSPMJG00000006768) #29	MRPS15 (ENSPMJG00000006766) #30	OSCP1 (ENSPMJG00000006764) #31	LSM10 (ENSPMJG00000006760) #32	STK40 (ENSPMJG00000006758) #33	EVA1B (ENSPMJG00000006755) #34	THRAP3 (ENSPMJG00000006749) #36	MAP7D1 (ENSPMJG00000006724) #37	TRAPPC3 (ENSPMJG00000006723)
Passeriformes_d	ANCESTRAL SPECIES	23	ENSGT00390000002053	ENSGT00950000183034.B	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.a.b #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Flycatcher	MODERN SPECIES	15	ENSFALG00000028211	GJA9 (ENSFALG00000014276) #7	MYCBP (ENSFALG00000027073) #8	RRAGC (ENSFALG00000001037) #9	ENSFALG00000028927	UTP11 (ENSFALG00000001026) #10	FHL3 (ENSFALG00000026222) #11	SF3A3 (ENSFALG00000001003) #12	INPP5B (ENSFALG00000000990) #13	MTF1 (ENSFALG00000000973) #14	YRDC (ENSFALG00000000964) #16	ENSFALG00000025288	ENSFALG00000000938	CDCA8 (ENSFALG00000000920) #20	ENSFALG00000023058	RSPO1 (ENSFALG00000029044) #22	GNL2 (ENSFALG00000000909) #23	DNALI1 (ENSFALG00000000901) #24	SNIP1 (ENSFALG00000000898) #25	MEAF6 (ENSFALG00000000895)	ZC3H12A (ENSFALG00000000890) #26	GRIK3 (ENSFALG00000000886) #27	CSF3R (ENSFALG00000000875) #29	MRPS15 (ENSFALG00000000866) #30	OSCP1 (ENSFALG00000000855) #31	LSM10 (ENSFALG00000028374) #32	STK40 (ENSFALG00000000846) #33	ENSFALG00000028751 #34	THRAP3 (ENSFALG00000000840) #36	MAP7D1 (ENSFALG00000000837) #37	ENSFALG00000000824
Passeriformes_g	ANCESTRAL SPECIES	22	ENSGT00870000136508.c.a	ENSGT00390000000586	ENSGT00420000030454	ENSGT00940000153695.C	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.a.b #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00940000164552.f.a	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Passeroidea	ANCESTRAL SPECIES	22	ENSGT00420000030454	ENSGT00940000153695.C	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a.a.b #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00940000164552.f.a	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Common canary	MODERN SPECIES	49	NFKBID (ENSSCAG00000015101)	GJA9 (ENSSCAG00000015104) #7	MYCBP (ENSSCAG00000015108) #8	RRAGC (ENSSCAG00000015111) #9	ENSSCAG00000015115	UTP11 (ENSSCAG00000015118) #10	FHL3 (ENSSCAG00000015125) #11	ENSSCAG00000015138 #12	INPP5B (ENSSCAG00000015164) #13	MTF1 (ENSSCAG00000015171) #14	YRDC (ENSSCAG00000015177) #16	ENSSCAG00000015183	ENSSCAG00000015184	CDCA8 (ENSSCAG00000015192) #20	ENSSCAG00000015197	RSPO1 (ENSSCAG00000015200) #22	GNL2 (ENSSCAG00000015204) #23	DNALI1 (ENSSCAG00000015210) #24	MEAF6 (ENSSCAG00000015214)	ZC3H12A (ENSSCAG00000015215) #26	GRIK3 (ENSSCAG00000015246) #27	ENSSCAG00000015337	ENSSCAG00000015339	CSF3R (ENSSCAG00000015342) #29	MRPS15 (ENSSCAG00000015349) #30	OSCP1 (ENSSCAG00000015356) #31	STK40 (ENSSCAG00000015361) #33	EVA1B (ENSSCAG00000015366) #34	THRAP3 (ENSSCAG00000015371) #36	MAP7D1 (ENSSCAG00000015376) #37	TRAPPC3 (ENSSCAG00000015380)
Zebra finch	MODERN SPECIES	16	RLF (ENSTGUG00000001447)	ENSTGUG00000029717	GJA9 (ENSTGUG00000024329) #7	RRAGC (ENSTGUG00000001449) #9	ENSTGUG00000028583	UTP11 (ENSTGUG00000001453) #10	FHL3 (ENSTGUG00000001464) #11	SF3A3 (ENSTGUG00000001466) #12	INPP5B (ENSTGUG00000001481) #13	MTF1 (ENSTGUG00000001500) #14	ENSTGUG00000001509	CDCA8 (ENSTGUG00000001531) #20	C23H1orf109 (ENSTGUG00000001534) #21	ENSTGUG00000022284	ENSTGUG00000019470	RSPO1 (ENSTGUG00000001536) #22	GNL2 (ENSTGUG00000001547) #23	DNALI1 (ENSTGUG00000001557) #24	SNIP1 (ENSTGUG00000001544) #25	MEAF6 (ENSTGUG00000001560)	ZC3H12A (ENSTGUG00000026131) #26	GRIK3 (ENSTGUG00000001569) #27	CSF3R (ENSTGUG00000001588) #29	MRPS15 (ENSTGUG00000024895) #30	OSCP1 (ENSTGUG00000001590) #31	LSM10 (ENSTGUG00000022736) #32	STK40 (ENSTGUG00000001603) #33	EVA1B (ENSTGUG00000025865) #34	THRAP3 (ENSTGUG00000001606) #36	MAP7D1 (ENSTGUG00000020289) #37	TRAPPC3 (ENSTGUG00000001616)
Medium ground finch	MODERN SPECIES	288														ENSGFOG00000009293	CDCA8 (ENSGFOG00000009298) #20	RSPO1 (ENSGFOG00000009302) #22	GNL2 (ENSGFOG00000009309) #23	SNIP1 (ENSGFOG00000009325) #25	MEAF6 (ENSGFOG00000009349)	ZC3H12A (ENSGFOG00000009367) #26	GRIK3 (ENSGFOG00000009532) #27
Galloanserae	ANCESTRAL SPECIES	25	ENSGT00940000161438	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Anatidae	ANCESTRAL SPECIES	21	ENSGT00940000161438	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000004808 #31	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b.b #37	ENSGT00390000003880.b.a	ENSGT00940000154317.a.a	ENSGT00390000015369
Duck	MODERN SPECIES	15	PAQR7 (ENSAPLG00000022783)	GJA9 (ENSAPLG00000009946) #7	MYCBP (ENSAPLG00000009940) #8	RRAGC (ENSAPLG00000009835) #9	ENSAPLG00000014589	UTP11 (ENSAPLG00000014597) #10	FHL3 (ENSAPLG00000014730) #11	SF3A3 (ENSAPLG00000014900) #12	INPP5B (ENSAPLG00000015547) #13	MTF1 (ENSAPLG00000016056) #14	YRDC (ENSAPLG00000025208) #16	MANEAL (ENSAPLG00000024518) #17	ENSAPLG00000016384	CDCA8 (ENSAPLG00000003470) #20	C1orf109 (ENSAPLG00000024192) #21	RSPO1 (ENSAPLG00000006500) #22	GNL2 (ENSAPLG00000006508) #23	DNALI1 (ENSAPLG00000006770) #24	MEAF6 (ENSAPLG00000007127)	ZC3H12A (ENSAPLG00000024542) #26	GRIK3 (ENSAPLG00000007300) #27	STK40 (ENSAPLG00000008561) #33	EVA1B (ENSAPLG00000025602) #34	THRAP3 (ENSAPLG00000009009) #36	COL8A2 (ENSAPLG00000025608)	ADPRS (ENSAPLG00000009421)	TEKT2 (ENSAPLG00000009574)	AGO3 (ENSAPLG00000009642)	AGO1 (ENSAPLG00000010440)	AGO4 (ENSAPLG00000010882)	CLSPN (ENSAPLG00000011178)
Pink-footed goose	MODERN SPECIES	73	PAQR7 (ENSABRG00000021242)	GJA9 (ENSABRG00000021240) #7	ENSABRG00000021235	RRAGC (ENSABRG00000021233) #9	ENSABRG00000021229	UTP11 (ENSABRG00000021212) #10	FHL3 (ENSABRG00000021184) #11	SF3A3 (ENSABRG00000021161) #12	INPP5B (ENSABRG00000021146) #13	MTF1 (ENSABRG00000021142) #14	YRDC (ENSABRG00000021137) #16	MANEAL (ENSABRG00000021131) #17	ENSABRG00000021121	CDCA8 (ENSABRG00000021106) #20	C1orf109 (ENSABRG00000021103) #21	RSPO1 (ENSABRG00000021097) #22	GNL2 (ENSABRG00000021088) #23	DNALI1 (ENSABRG00000021085) #24	SNIP1 (ENSABRG00000021080) #25	MEAF6 (ENSABRG00000021072)	ZC3H12A (ENSABRG00000021065) #26	GRIK3 (ENSABRG00000021061) #27	CSF3R (ENSABRG00000021053) #29	OSCP1 (ENSABRG00000021050) #31	STK40 (ENSABRG00000021045) #33	THRAP3 (ENSABRG00000021040) #36	MAP7D1 (ENSABRG00000020951) #37	TRAPPC3 (ENSABRG00000020920)	COL8A2 (ENSABRG00000020919)	ADPRS (ENSABRG00000020915)	TEKT2 (ENSABRG00000020906)
Phasianidae	ANCESTRAL SPECIES	24	ENSGT01030000234597.a.a	ENSGT00940000161438	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Phasianidae_b	ANCESTRAL SPECIES	23	ENSGT01030000234597.a.a	ENSGT00940000161438	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37	ENSGT00390000003880.b.a
Turkey	MODERN SPECIES	17	ENSMGAG00000021309	ENSMGAG00000003713	ENSMGAG00000003386 #37	ENSMGAG00000021587 #36	ENSMGAG00000003640 #36	ENSMGAG00000018617 #34	ENSMGAG00000003614 #33	ENSMGAG00000015707 #32	ENSMGAG00000003562 #30	ENSMGAG00000003573 #31	CSF3R (ENSMGAG00000003526) #29	ENSMGAG00000003413 #27	ENSMGAG00000003371 #26	ENSMGAG00000003361	ENSMGAG00000003330 #25	RSPO1 (ENSMGAG00000003245) #22	ENSMGAG00000003267 #23	DNALI1 (ENSMGAG00000003325) #24	ENSMGAG00000021640	ENSMGAG00000019449	ENSMGAG00000003097	ENSMGAG00000002833 #16	ENSMGAG00000003089 #17	INPP5B (ENSMGAG00000002943) #13	MTF1 (ENSMGAG00000003052) #14	ENSMGAG00000017916	SF3A3 (ENSMGAG00000002875) #12	ENSMGAG00000002858 #11	ENSMGAG00000002847 #10	ENSMGAG00000002765	ENSMGAG00000002824 #9
Chicken	MODERN SPECIES	15	STMN1 (ENSGALG00010013517)	PAQR7 (ENSGALG00010013598)	GJA9 (ENSGALG00010013541) #7	MYCBP (ENSGALG00010013627) #8	RRAGC (ENSGALG00010013645) #9	POU3F1 (ENSGALG00010017832)	UTP11 (ENSGALG00010014567) #10	FHL3 (ENSGALG00010014655) #11	SF3A3 (ENSGALG00010013215) #12	INPP5B (ENSGALG00010013269) #13	MTF1 (ENSGALG00010013274) #14	YRDC (ENSGALG00010013277) #16	MANEAL (ENSGALG00010013284) #17	ENSGALG00010013302	C1orf109 (ENSGALG00010013103) #21	RSPO1 (ENSGALG00010013311) #22	GNL2 (ENSGALG00010016600) #23	DNALI1 (ENSGALG00010016611) #24	SNIP1 (ENSGALG00010016613) #25	MEAF6 (ENSGALG00010016677)	ZC3H12A (ENSGALG00010016458) #26	GRIK3 (ENSGALG00010016578) #27	CSF3R (ENSGALG00010014690) #29	MRPS15 (ENSGALG00010014729) #30	OSCP1 (ENSGALG00010018258) #31	LSM10 (ENSGALG00010014745) #32	STK40 (ENSGALG00010014762) #33	EVA1B (ENSGALG00010014780) #34	THRAP3 (ENSGALG00010014795) #36	MAP7D1 (ENSGALG00010014806) #37	TRAPPC3 (ENSGALG00010014859)
Japanese quail	MODERN SPECIES	15	STMN1 (ENSCJPG00005016353)	PAQR7 (ENSCJPG00005016354)	GJA9 (ENSCJPG00005016355) #7	MYCBP (ENSCJPG00005016356) #8	RRAGC (ENSCJPG00005016357) #9	ENSCJPG00005016359	UTP11 (ENSCJPG00005016361) #10	FHL3 (ENSCJPG00005016362) #11	SF3A3 (ENSCJPG00005016363) #12	INPP5B (ENSCJPG00005016364) #13	MTF1 (ENSCJPG00005016365) #14	YRDC (ENSCJPG00005016366) #16	ENSCJPG00005016367	MANEAL (ENSCJPG00005016436) #17	C1orf109 (ENSCJPG00005016437) #21	RSPO1 (ENSCJPG00005016438) #22	GNL2 (ENSCJPG00005016439) #23	DNALI1 (ENSCJPG00005016440) #24	SNIP1 (ENSCJPG00005016441) #25	MEAF6 (ENSCJPG00005016442)	ZC3H12A (ENSCJPG00005016443) #26	GRIK3 (ENSCJPG00005016444) #27	CSF3R (ENSCJPG00005016940) #29	OSCP1 (ENSCJPG00005016941) #31	LSM10 (ENSCJPG00005017018) #32	STK40 (ENSCJPG00005017020) #33	EVA1B (ENSCJPG00005017024) #34	THRAP3 (ENSCJPG00005017025) #36	MAP7D1 (ENSCJPG00005017036) #37	TRAPPC3 (ENSCJPG00005017040)	COL8A2 (ENSCJPG00005017048)
African ostrich	MODERN SPECIES	893																RSPO1 (ENSSCUG00000013457) #22	GNL2 (ENSSCUG00000013452) #23	SNIP1 (ENSSCUG00000013451) #25	MEAF6 (ENSSCUG00000013449)	ENSSCUG00000013445 #26	GRIK3 (ENSSCUG00000013440) #27	MRPS15 (ENSSCUG00000013438) #30	OSCP1 (ENSSCUG00000013435) #31	STK40 (ENSSCUG00000013432) #33	THRAP3 (ENSSCUG00000013426) #36
Australian saltwater crocodile	MODERN SPECIES	58	RHBDL2 (ENSCPRG00005002996)	GJA9 (ENSCPRG00005002991) #7	MYCBP (ENSCPRG00005002986) #8	RRAGC (ENSCPRG00005002919) #9	ENSCPRG00005002914	UTP11 (ENSCPRG00005002913) #10	FHL3 (ENSCPRG00005002908) #11	SF3A3 (ENSCPRG00005002902) #12	INPP5B (ENSCPRG00005002678) #13	MTF1 (ENSCPRG00005002656) #14	YRDC (ENSCPRG00005002651) #16	MANEAL (ENSCPRG00005002648) #17	ENSCPRG00005002634	C1orf109 (ENSCPRG00005002620) #21	CDCA8 (ENSCPRG00005002599) #20	RSPO1 (ENSCPRG00005002591) #22	GNL2 (ENSCPRG00005002554) #23	DNALI1 (ENSCPRG00005002547) #24	SNIP1 (ENSCPRG00005002543) #25	MEAF6 (ENSCPRG00005002540)	ZC3H12A (ENSCPRG00005002535) #26	GRIK3 (ENSCPRG00005002528) #27	ENSCPRG00005002521 #29	MRPS15 (ENSCPRG00005002507) #30	OSCP1 (ENSCPRG00005002504) #31	LSM10 (ENSCPRG00005002502) #32	STK40 (ENSCPRG00005002499) #33	THRAP3 (ENSCPRG00005002448) #36	MAP7D1 (ENSCPRG00005002420) #37	ENSCPRG00005002419
Cryptodira	ANCESTRAL SPECIES	31	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000161202.b	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000160627 #35	ENSGT00950000183163.a.a #36
Testudinoidea	ANCESTRAL SPECIES	27	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b.a #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000161202.b	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00990000210150	ENSGT00950000183163.a.a #36
Emydidae	ANCESTRAL SPECIES	39	ENSGT00940000159442	ENSGT01090000260070.C #7	ENSGT00390000017974.a #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b.a #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000161202.b	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00990000210150	ENSGT00950000183163.a.a #36
painted turtle	MODERN SPECIES	6				ENSCPBG00000018277	UTP11 (ENSCPBG00000018279) #10	FHL3 (ENSCPBG00000018283) #11	ENSCPBG00000018291 #12	INPP5B (ENSCPBG00000018424) #13	MTF1 (ENSCPBG00000018432) #14	MANEAL (ENSCPBG00000018441) #17	YRDC (ENSCPBG00000018446) #16	ENSCPBG00000018453	ENSCPBG00000018463	CDCA8 (ENSCPBG00000018466) #20	C1orf109 (ENSCPBG00000018470) #21	RSPO1 (ENSCPBG00000018476) #22	GNL2 (ENSCPBG00000018483) #23	DNALI1 (ENSCPBG00000018486) #24	SNIP1 (ENSCPBG00000018488) #25	MEAF6 (ENSCPBG00000018490)	ZC3H12A (ENSCPBG00000018492) #26	GRIK3 (ENSCPBG00000018496) #27	ENSCPBG00000018503 #29	MRPS15 (ENSCPBG00000018508) #30	ENSCPBG00000018513	OSCP1 (ENSCPBG00000018516) #31	STK40 (ENSCPBG00000018522) #33	EVA1B (ENSCPBG00000018526) #34	THRAP3 (ENSCPBG00000018530) #36	MAP7D1 (ENSCPBG00000018535) #37	ENSCPBG00000018540
Three-toed box turtle	MODERN SPECIES	111	RHBDL2 (ENSTMTG00000015778)	GJA9 (ENSTMTG00000015767) #7	ENSTMTG00000015755 #8	RRAGC (ENSTMTG00000015737) #9	ENSTMTG00000015715	UTP11 (ENSTMTG00000015695) #10	FHL3 (ENSTMTG00000015683) #11	SF3A3 (ENSTMTG00000015641) #12	INPP5B (ENSTMTG00000015620) #13	MTF1 (ENSTMTG00000009963) #14	YRDC (ENSTMTG00000009944) #16	MANEAL (ENSTMTG00000009931) #17	ENSTMTG00000009888	CDCA8 (ENSTMTG00000009845) #20	C1orf109 (ENSTMTG00000009825) #21	RSPO1 (ENSTMTG00000009804) #22	GNL2 (ENSTMTG00000009773) #23	DNALI1 (ENSTMTG00000009756) #24	SNIP1 (ENSTMTG00000009743) #25	MEAF6 (ENSTMTG00000009714)	ZC3H12A (ENSTMTG00000009698) #26	GRIK3 (ENSTMTG00000009387) #27	ENSTMTG00000009333 #29	MRPS15 (ENSTMTG00000009309) #30	ENSTMTG00000009300	OSCP1 (ENSTMTG00000009274) #31	LSM10 (ENSTMTG00000009262) #32	STK40 (ENSTMTG00000009239) #33	EVA1B (ENSTMTG00000009227) #34	ENSTMTG00000009216	THRAP3 (ENSTMTG00000009191) #36
Testudinidae	ANCESTRAL SPECIES	4	ENSGT01090000260070.C #7	ENSGT00940000167233	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000178211	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b.a #17	ENSGT00940000164552	ENSGT00390000011115 #20	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000161202.b	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00950000183163.a.a #36	ENSGT00950000182941.a.a.b #37
Abingdon island giant tortoise	MODERN SPECIES	1941			ENSCABG00000013100	UTP11 (ENSCABG00000013098) #10	FHL3 (ENSCABG00000013093) #11	SF3A3 (ENSCABG00000013088) #12	ENSCABG00000013083	INPP5B (ENSCABG00000013076) #13	MTF1 (ENSCABG00000013061) #14	YRDC (ENSCABG00000013059) #16	ENSCABG00000013058 #17	ENSCABG00000013057 #17	ENSCABG00000013052	CDCA8 (ENSCABG00000013050) #20	C1orf109 (ENSCABG00000013046) #21	RSPO1 (ENSCABG00000013043) #22	GNL2 (ENSCABG00000013042) #23	DNALI1 (ENSCABG00000013031) #24	SNIP1 (ENSCABG00000013027) #25	MEAF6 (ENSCABG00000013023)	ZC3H12A (ENSCABG00000013020) #26	GRIK3 (ENSCABG00000013001) #27
Goode s thornscrub tortoise	MODERN SPECIES	12	RHBDL2 (ENSGEVG00005021120)	GJA9 (ENSGEVG00005021122) #7	ENSGEVG00005021125	RRAGC (ENSGEVG00005021131) #9	ENSGEVG00005021137	UTP11 (ENSGEVG00005021144) #10	FHL3 (ENSGEVG00005021149) #11	SF3A3 (ENSGEVG00005021154) #12	INPP5B (ENSGEVG00005021207) #13	MTF1 (ENSGEVG00005021266) #14	YRDC (ENSGEVG00005021268) #16	MANEAL (ENSGEVG00005021269) #17	ENSGEVG00005021270	CDCA8 (ENSGEVG00005021271) #20	C1orf109 (ENSGEVG00005021272) #21	RSPO1 (ENSGEVG00005004280) #22	GNL2 (ENSGEVG00005004309) #23	DNALI1 (ENSGEVG00005004338) #24	SNIP1 (ENSGEVG00005004359) #25	MEAF6 (ENSGEVG00005004388)	ZC3H12A (ENSGEVG00005004569) #26	GRIK3 (ENSGEVG00005004662) #27	CSF3R (ENSGEVG00005005019) #29	MRPS15 (ENSGEVG00005005058) #30	ENSGEVG00005005085	OSCP1 (ENSGEVG00005005115) #31	LSM10 (ENSGEVG00005005145) #32	STK40 (ENSGEVG00005005164) #33	EVA1B (ENSGEVG00005005210) #34	ENSGEVG00005005227	THRAP3 (ENSGEVG00005005253) #36
Chinese turtle	MODERN SPECIES	1959	KDF1 (ENSPSIG00000004091)	RHBDL2 (ENSPSIG00000004115)	GJA9 (ENSPSIG00000000575) #7	RRAGC (ENSPSIG00000004140) #9	ENSPSIG00000000580	UTP11 (ENSPSIG00000004184) #10	FHL3 (ENSPSIG00000004237) #11	SF3A3 (ENSPSIG00000004273) #12	INPP5B (ENSPSIG00000005118) #13	MTF1 (ENSPSIG00000005687) #14	YRDC (ENSPSIG00000006483) #16	MANEAL (ENSPSIG00000006656) #17	ENSPSIG00000006661	CDCA8 (ENSPSIG00000007288) #20	C1orf109 (ENSPSIG00000007785) #21	RSPO1 (ENSPSIG00000007793) #22	ENSPSIG00000000588	GNL2 (ENSPSIG00000007800) #23	DNALI1 (ENSPSIG00000008823) #24	SNIP1 (ENSPSIG00000009136) #25	MEAF6 (ENSPSIG00000009138)	ZC3H12A (ENSPSIG00000009198) #26	GRIK3 (ENSPSIG00000009454) #27	CSF3R (ENSPSIG00000009762) #29	MRPS15 (ENSPSIG00000009916) #30	OSCP1 (ENSPSIG00000009947) #31	LSM10 (ENSPSIG00000000590) #32	STK40 (ENSPSIG00000009955) #33	EVA1B (ENSPSIG00000010264) #34	ENSPSIG00000010281 #35	THRAP3 (ENSPSIG00000010296) #36
Lepidosauria	ANCESTRAL SPECIES	18		ENSGT00940000159442	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000166129	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00990000210150	ENSGT00940000160627 #35
Episquamata	ANCESTRAL SPECIES	7		ENSGT00940000159442	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000166129	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00990000210150	ENSGT00940000160627 #35
Laterata	ANCESTRAL SPECIES	38		ENSGT00940000159442	ENSGT01090000260070.C #7	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000016054.b #17	ENSGT00940000164552	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00940000166129	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00940000161946	ENSGT00500000044870.b
Common wall lizard	MODERN SPECIES	16	POLR2C (ENSPMRG00000019522)	RHBDL2 (ENSPMRG00000019515)	GJA9 (ENSPMRG00000018652) #7	MYCBP (ENSPMRG00000018647) #8	RRAGC (ENSPMRG00000018642) #9	UTP11 (ENSPMRG00000018632) #10	FHL3 (ENSPMRG00000018619) #11	ENSPMRG00000018611	SF3A3 (ENSPMRG00000018559) #12	INPP5B (ENSPMRG00000018016) #13	MTF1 (ENSPMRG00000017918) #14	YRDC (ENSPMRG00000017912) #16	MANEAL (ENSPMRG00000017909) #17	ENSPMRG00000017862	ENSPMRG00000017841 #21	RSPO1 (ENSPMRG00000017833) #22	ENSPMRG00000017825	ENSPMRG00000017799 #24	ENSPMRG00000017795 #25	MEAF6 (ENSPMRG00000017783)	ZC3H12A (ENSPMRG00000017778) #26	GRIK3 (ENSPMRG00000017765) #27	ENSPMRG00000017749 #29	MRPS15 (ENSPMRG00000017738) #30	ENSPMRG00000017728	OSCP1 (ENSPMRG00000017717) #31	LSM10 (ENSPMRG00000017708) #32	STK40 (ENSPMRG00000017699) #33	EVA1B (ENSPMRG00000017690) #34	ENSPMRG00000017684	ENSPMRG00000017678
Argentine black and white tegu	MODERN SPECIES	117	ENSSMRG00000000289	C1orf109 (ENSSMRG00000000245) #21	PITHD1 (ENSSMRG00000000229)	LYPLA2 (ENSSMRG00000000196)	GALE (ENSSMRG00000000133)	RHBDL2 (ENSSMRG00000000112)	MYCBP (ENSSMRG00000000089) #8	RRAGC (ENSSMRG00000000086) #9	ENSSMRG00000000031	UTP11 (ENSSMRG00000020814) #10	FHL3 (ENSSMRG00000020813) #11	SF3A3 (ENSSMRG00000020812) #12	INPP5B (ENSSMRG00000020810) #13	MTF1 (ENSSMRG00000020775) #14	MANEAL (ENSSMRG00000020774) #17	RSPO1 (ENSSMRG00000020773) #22	GNL2 (ENSSMRG00000020772) #23	DNALI1 (ENSSMRG00000020771) #24	SNIP1 (ENSSMRG00000020770) #25	MEAF6 (ENSSMRG00000020769)	ZC3H12A (ENSSMRG00000020767) #26	GRIK3 (ENSSMRG00000020766) #27
Toxicofera	ANCESTRAL SPECIES	29					ENSGT00940000159442	ENSGT00390000017974 #8	ENSGT00950000183031.A.a.a #9	ENSGT00940000165372	ENSGT00390000005813 #10	ENSGT00950000183028.a.b #11	ENSGT00530000063402.a #12	ENSGT00940000156762 #13	ENSGT00940000157291 #14	ENSGT00390000015364.b #16	ENSGT00390000008551 #21	ENSGT00940000158871 #22	ENSGT00810000125524 #23	ENSGT00390000003012 #24	ENSGT00940000156553 #25	ENSGT00390000015257	ENSGT00940000155107.a.a #26	ENSGT00940000159465 #27	ENSGT00940000158915 #29	ENSGT00390000001737 #30	ENSGT00390000004808 #31	ENSGT00510000048364 #32	ENSGT00950000182986.b #33	ENSGT00940000154096.b.b.b.b.a #34	ENSGT00990000210150	ENSGT00950000183163.a.a #36	ENSGT00940000158613
Lizard	MODERN SPECIES	1038		CTPS1 (ENSACAG00000016935)	ENSACAG00000016960	SCMH1 (ENSACAG00000016962)	ENSACAG00000016978	MYCBP (ENSACAG00000016991) #8	ENSACAG00000042470	RRAGC (ENSACAG00000017010) #9	UTP11 (ENSACAG00000017024) #10	FHL3 (ENSACAG00000017037) #11	SF3A3 (ENSACAG00000017058) #12	INPP5B (ENSACAG00000017122) #13	MTF1 (ENSACAG00000017181) #14	YRDC (ENSACAG00000017203) #16	C1orf109 (ENSACAG00000017213) #21	RSPO1 (ENSACAG00000017216) #22	GNL2 (ENSACAG00000017224) #23	DNALI1 (ENSACAG00000035745) #24	SNIP1 (ENSACAG00000017268) #25	MEAF6 (ENSACAG00000017271)	ZC3H12A (ENSACAG00000017285) #26	GRIK3 (ENSACAG00000017294) #27
tuatara	MODERN SPECIES	1595	STX12 (ENSSPUG00000004230)	RHBDL2 (ENSSPUG00000004110)	MYCBP (ENSSPUG00000004077) #8	RRAGC (ENSSPUG00000004062) #9	ENSSPUG00000004053	UTP11 (ENSSPUG00000004034) #10	FHL3 (ENSSPUG00000004027) #11	SF3A3 (ENSSPUG00000004010) #12	INPP5B (ENSSPUG00000003982) #13	MTF1 (ENSSPUG00000003959) #14	YRDC (ENSSPUG00000003946) #16	MANEAL (ENSSPUG00000003938) #17	ENSSPUG00000003925	ENSSPUG00000003916	C1orf109 (ENSSPUG00000003880) #21	RSPO1 (ENSSPUG00000003849) #22	GNL2 (ENSSPUG00000003826) #23	DNALI1 (ENSSPUG00000003764) #24	SNIP1 (ENSSPUG00000003752) #25	MEAF6 (ENSSPUG00000003691)	ZC3H12A (ENSSPUG00000003668) #26	ENSSPUG00000003657	GRIK3 (ENSSPUG00000003623) #27